Query 007073
Match_columns 619
No_of_seqs 683 out of 5463
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 18:32:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007073.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007073hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3.1E-60 6.7E-65 559.9 31.9 467 76-573 475-951 (968)
2 KOG1187 Serine/threonine prote 100.0 1.3E-55 2.8E-60 455.5 27.3 289 280-573 61-352 (361)
3 KOG0192 Tyrosine kinase specif 100.0 7.1E-49 1.5E-53 402.3 20.3 255 296-573 43-303 (362)
4 KOG0197 Tyrosine kinases [Sign 100.0 9.4E-49 2E-53 399.3 15.7 259 290-573 202-461 (468)
5 KOG0581 Mitogen-activated prot 100.0 4.9E-47 1.1E-51 369.8 18.7 250 296-568 81-334 (364)
6 KOG1026 Nerve growth factor re 100.0 4E-47 8.6E-52 405.6 11.8 263 290-573 482-762 (774)
7 KOG0595 Serine/threonine-prote 100.0 1.3E-45 2.7E-50 362.7 18.9 202 293-503 9-218 (429)
8 KOG0591 NIMA (never in mitosis 100.0 4.5E-46 9.8E-51 347.8 9.6 261 294-572 19-284 (375)
9 KOG0575 Polo-like serine/threo 100.0 1.2E-44 2.7E-49 372.6 19.2 248 294-568 18-268 (592)
10 KOG0615 Serine/threonine prote 100.0 4.2E-45 9E-50 358.3 13.5 255 292-569 170-437 (475)
11 KOG0593 Predicted protein kina 100.0 1.2E-44 2.7E-49 341.5 14.8 263 294-568 2-283 (396)
12 KOG0598 Ribosomal protein S6 k 100.0 3.3E-44 7.2E-49 350.0 14.5 259 292-576 23-284 (357)
13 KOG0196 Tyrosine kinase, EPH ( 100.0 2.1E-45 4.5E-50 384.4 5.0 256 294-573 629-891 (996)
14 KOG0193 Serine/threonine prote 100.0 1.3E-43 2.9E-48 363.0 12.3 264 287-573 385-653 (678)
15 KOG1095 Protein tyrosine kinas 100.0 6.2E-43 1.3E-47 386.6 16.5 263 292-575 690-963 (1025)
16 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.9E-42 8.4E-47 358.1 19.5 264 290-573 3-334 (338)
17 KOG0198 MEKK and related serin 100.0 3.4E-42 7.3E-47 342.3 15.1 254 294-570 17-277 (313)
18 KOG4278 Protein tyrosine kinas 100.0 4.1E-42 8.8E-47 350.3 14.8 264 287-575 260-525 (1157)
19 KOG4721 Serine/threonine prote 100.0 7.9E-43 1.7E-47 352.8 8.6 247 292-573 122-368 (904)
20 KOG0582 Ste20-like serine/thre 100.0 5.5E-41 1.2E-45 332.4 21.1 268 291-572 23-298 (516)
21 KOG0194 Protein tyrosine kinas 100.0 2.5E-42 5.3E-47 358.2 11.5 265 286-574 149-421 (474)
22 KOG0661 MAPK related serine/th 100.0 4E-42 8.7E-47 343.0 12.4 265 292-569 8-291 (538)
23 KOG0600 Cdc2-related protein k 100.0 1.4E-41 3.1E-46 341.5 16.1 264 294-568 117-399 (560)
24 KOG0592 3-phosphoinositide-dep 100.0 4.2E-41 9E-46 340.8 16.3 258 290-577 69-342 (604)
25 KOG1094 Discoidin domain recep 100.0 3.4E-41 7.3E-46 342.4 15.7 268 290-573 534-804 (807)
26 cd05104 PTKc_Kit Catalytic dom 100.0 8.8E-41 1.9E-45 352.2 19.4 263 290-572 31-373 (375)
27 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.6E-40 3.4E-45 334.0 20.2 256 293-572 4-264 (266)
28 cd05096 PTKc_DDR1 Catalytic do 100.0 2.6E-40 5.6E-45 339.2 22.2 266 293-572 4-304 (304)
29 KOG0659 Cdk activating kinase 100.0 1.4E-40 3.1E-45 309.1 18.2 263 294-569 2-281 (318)
30 PHA02988 hypothetical protein; 100.0 2.3E-40 5.1E-45 335.6 21.0 262 279-573 10-279 (283)
31 cd05106 PTKc_CSF-1R Catalytic 100.0 1.6E-40 3.6E-45 349.9 19.4 264 290-573 34-372 (374)
32 KOG0578 p21-activated serine/t 100.0 1.2E-40 2.6E-45 340.5 16.6 249 294-568 273-522 (550)
33 KOG4257 Focal adhesion tyrosin 100.0 1.1E-40 2.4E-45 340.4 15.9 266 287-577 382-653 (974)
34 PF07714 Pkinase_Tyr: Protein 100.0 1.9E-40 4E-45 332.1 15.3 250 298-570 3-259 (259)
35 KOG0583 Serine/threonine prote 100.0 1E-39 2.2E-44 337.9 20.7 250 291-567 14-273 (370)
36 KOG0201 Serine/threonine prote 100.0 1.1E-40 2.4E-45 330.3 12.8 254 293-572 12-268 (467)
37 cd05048 PTKc_Ror Catalytic Dom 100.0 1.9E-39 4.1E-44 329.0 21.7 258 294-572 5-282 (283)
38 KOG0616 cAMP-dependent protein 100.0 3.6E-40 7.9E-45 310.8 14.9 239 292-560 42-283 (355)
39 cd05072 PTKc_Lyn Catalytic dom 100.0 1.6E-39 3.5E-44 325.5 19.9 256 292-572 4-260 (261)
40 cd05068 PTKc_Frk_like Catalyti 100.0 3.3E-39 7.2E-44 323.3 21.9 257 291-572 3-260 (261)
41 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.8E-39 6E-44 322.9 21.2 251 294-570 4-255 (256)
42 KOG2345 Serine/threonine prote 100.0 3.6E-40 7.7E-45 303.5 13.3 265 291-573 18-300 (302)
43 cd06649 PKc_MEK2 Catalytic dom 100.0 2.2E-39 4.8E-44 336.2 20.6 263 293-569 4-301 (331)
44 KOG0597 Serine-threonine prote 100.0 6.5E-40 1.4E-44 332.0 15.7 247 294-568 2-250 (808)
45 cd05631 STKc_GRK4 Catalytic do 100.0 2.3E-39 5E-44 328.9 19.3 252 295-568 1-260 (285)
46 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.1E-39 4.5E-44 343.0 19.7 264 290-573 33-397 (400)
47 cd08228 STKc_Nek6 Catalytic do 100.0 5.6E-39 1.2E-43 322.7 21.5 262 294-574 2-266 (267)
48 cd05062 PTKc_IGF-1R Catalytic 100.0 2.7E-39 5.8E-44 327.0 19.3 261 291-572 3-277 (277)
49 cd05033 PTKc_EphR Catalytic do 100.0 5.9E-39 1.3E-43 322.4 21.7 257 293-573 3-265 (266)
50 cd05052 PTKc_Abl Catalytic dom 100.0 4.2E-39 9E-44 323.0 20.5 255 293-572 5-261 (263)
51 cd05049 PTKc_Trk Catalytic dom 100.0 4.9E-39 1.1E-43 325.4 21.1 259 293-572 4-280 (280)
52 cd05108 PTKc_EGFR Catalytic do 100.0 4.1E-39 8.8E-44 332.1 20.5 257 293-574 6-269 (316)
53 cd07848 STKc_CDKL5 Catalytic d 100.0 6.5E-39 1.4E-43 325.9 21.7 264 294-568 1-283 (287)
54 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.6E-39 1.6E-43 325.6 21.7 263 294-568 5-284 (288)
55 KOG0605 NDR and related serine 100.0 2.1E-39 4.5E-44 328.9 17.0 263 290-576 137-448 (550)
56 cd05054 PTKc_VEGFR Catalytic d 100.0 3.8E-39 8.2E-44 334.9 19.4 263 291-573 4-333 (337)
57 KOG1025 Epidermal growth facto 100.0 2.6E-40 5.6E-45 347.2 10.6 252 297-573 699-957 (1177)
58 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1E-38 2.2E-43 318.9 20.6 252 294-571 4-256 (256)
59 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-38 2.3E-43 323.7 20.9 258 294-572 5-282 (283)
60 cd05085 PTKc_Fer Catalytic dom 100.0 2.3E-38 5E-43 315.0 22.2 248 300-571 1-249 (250)
61 PLN00034 mitogen-activated pro 100.0 9.9E-39 2.1E-43 334.4 20.4 249 294-569 74-328 (353)
62 cd06650 PKc_MEK1 Catalytic dom 100.0 2E-38 4.4E-43 329.1 22.4 202 292-502 3-205 (333)
63 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.3E-39 1.4E-43 333.2 18.5 254 294-569 1-257 (333)
64 cd05148 PTKc_Srm_Brk Catalytic 100.0 8.1E-39 1.8E-43 320.4 18.5 257 291-572 3-260 (261)
65 cd05107 PTKc_PDGFR_beta Cataly 100.0 7.9E-39 1.7E-43 338.4 19.2 265 289-573 32-399 (401)
66 cd05612 STKc_PRKX_like Catalyt 100.0 4.6E-39 1E-43 327.7 16.7 244 294-567 1-252 (291)
67 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.9E-38 4.2E-43 317.5 20.8 255 292-572 4-259 (260)
68 cd05043 PTK_Ryk Pseudokinase d 100.0 1.6E-38 3.4E-43 321.8 20.4 261 292-573 4-276 (280)
69 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.6E-38 3.4E-43 325.8 20.5 265 293-568 4-287 (303)
70 KOG0589 Serine/threonine prote 100.0 1.6E-39 3.4E-44 330.9 12.9 252 294-569 4-258 (426)
71 cd05084 PTKc_Fes Catalytic dom 100.0 2.3E-38 5.1E-43 315.4 21.2 248 300-571 1-251 (252)
72 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.3E-38 9.4E-43 316.0 23.3 261 294-573 2-265 (267)
73 PHA03212 serine/threonine kina 100.0 2.3E-38 4.9E-43 334.8 22.3 262 292-568 90-375 (391)
74 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.7E-38 3.7E-43 322.1 20.4 267 296-573 6-281 (283)
75 cd05053 PTKc_FGFR Catalytic do 100.0 8.7E-39 1.9E-43 325.9 18.3 265 288-573 6-291 (293)
76 cd05059 PTKc_Tec_like Catalyti 100.0 1.9E-38 4.2E-43 316.9 20.4 251 294-570 4-255 (256)
77 cd05071 PTKc_Src Catalytic dom 100.0 4.1E-38 8.9E-43 315.7 22.6 254 293-572 5-259 (262)
78 cd07862 STKc_CDK6 Catalytic do 100.0 1.5E-38 3.2E-43 323.7 19.7 263 294-568 1-286 (290)
79 cd05045 PTKc_RET Catalytic dom 100.0 2.4E-38 5.1E-43 322.3 21.0 258 295-573 1-286 (290)
80 cd05111 PTK_HER3 Pseudokinase 100.0 2.9E-38 6.3E-43 319.8 21.4 255 294-573 7-268 (279)
81 KOG0658 Glycogen synthase kina 100.0 3E-39 6.4E-44 314.6 13.5 259 295-568 25-305 (364)
82 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.9E-38 4.2E-43 320.7 20.1 259 292-571 4-276 (277)
83 PTZ00263 protein kinase A cata 100.0 1.4E-38 3E-43 329.9 19.3 240 293-562 17-259 (329)
84 cd05571 STKc_PKB Catalytic dom 100.0 7E-39 1.5E-43 331.3 17.1 242 300-568 1-250 (323)
85 KOG3653 Transforming growth fa 100.0 3E-39 6.5E-44 322.2 13.6 269 294-573 210-503 (534)
86 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.7E-38 5.8E-43 316.5 20.5 256 291-572 3-259 (260)
87 cd05091 PTKc_Ror2 Catalytic do 100.0 1.7E-38 3.6E-43 322.2 18.9 258 294-572 5-282 (283)
88 cd05061 PTKc_InsR Catalytic do 100.0 2.4E-38 5.3E-43 321.9 19.8 263 290-573 2-278 (288)
89 KOG0694 Serine/threonine prote 100.0 1E-38 2.2E-43 332.5 17.2 247 289-563 363-613 (694)
90 KOG0585 Ca2+/calmodulin-depend 100.0 1.4E-38 3.1E-43 317.1 17.4 258 291-572 94-375 (576)
91 KOG0663 Protein kinase PITSLRE 100.0 1.1E-38 2.5E-43 305.0 15.9 263 294-568 76-360 (419)
92 KOG0588 Serine/threonine prote 100.0 6.2E-39 1.4E-43 331.4 14.9 247 295-569 13-263 (786)
93 cd05069 PTKc_Yes Catalytic dom 100.0 6.2E-38 1.4E-42 313.9 21.8 254 293-572 5-259 (260)
94 cd05109 PTKc_HER2 Catalytic do 100.0 6.1E-38 1.3E-42 317.4 21.8 257 293-574 6-269 (279)
95 cd05032 PTKc_InsR_like Catalyt 100.0 2.1E-38 4.6E-43 320.3 18.4 260 292-572 4-277 (277)
96 cd08229 STKc_Nek7 Catalytic do 100.0 4.5E-38 9.8E-43 316.0 20.6 261 294-573 2-265 (267)
97 PTZ00283 serine/threonine prot 100.0 1.6E-38 3.5E-43 345.3 18.6 259 290-569 28-297 (496)
98 cd05116 PTKc_Syk Catalytic dom 100.0 7.5E-38 1.6E-42 312.8 21.8 246 301-572 2-254 (257)
99 cd05608 STKc_GRK1 Catalytic do 100.0 3E-38 6.5E-43 319.9 19.0 244 302-564 1-247 (280)
100 cd05093 PTKc_TrkB Catalytic do 100.0 5.1E-38 1.1E-42 319.6 20.7 258 294-573 5-279 (288)
101 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.5E-38 9.8E-43 322.5 20.2 263 290-573 11-296 (304)
102 cd05089 PTKc_Tie1 Catalytic do 100.0 6.7E-38 1.5E-42 320.1 21.4 257 294-573 2-275 (297)
103 cd05585 STKc_YPK1_like Catalyt 100.0 2.9E-38 6.4E-43 325.1 18.8 244 302-572 1-247 (312)
104 cd05115 PTKc_Zap-70 Catalytic 100.0 8.4E-38 1.8E-42 312.5 21.4 247 301-572 2-254 (257)
105 cd05614 STKc_MSK2_N N-terminal 100.0 2.7E-38 5.8E-43 328.4 18.4 252 295-568 1-266 (332)
106 cd05055 PTKc_PDGFR Catalytic d 100.0 4.2E-38 9.1E-43 322.4 19.5 260 291-572 32-300 (302)
107 cd05097 PTKc_DDR_like Catalyti 100.0 8.1E-38 1.7E-42 319.2 21.3 265 293-571 4-294 (295)
108 PTZ00267 NIMA-related protein 100.0 4.4E-38 9.6E-43 341.6 20.4 252 295-568 68-322 (478)
109 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.5E-38 1.2E-42 326.8 20.3 261 295-568 1-289 (338)
110 cd05066 PTKc_EphR_A Catalytic 100.0 1E-37 2.2E-42 313.7 21.4 256 293-572 3-265 (267)
111 cd05034 PTKc_Src_like Catalyti 100.0 7.7E-38 1.7E-42 313.3 20.4 257 291-572 3-260 (261)
112 cd05051 PTKc_DDR Catalytic dom 100.0 1.6E-37 3.4E-42 317.2 22.9 265 293-571 4-295 (296)
113 PTZ00426 cAMP-dependent protei 100.0 4E-38 8.7E-43 327.3 18.9 247 292-568 28-283 (340)
114 cd05098 PTKc_FGFR1 Catalytic d 100.0 5E-38 1.1E-42 322.7 19.4 261 292-573 16-299 (307)
115 cd05588 STKc_aPKC Catalytic do 100.0 6.2E-38 1.4E-42 325.0 20.2 246 300-563 1-250 (329)
116 cd05088 PTKc_Tie2 Catalytic do 100.0 5.9E-38 1.3E-42 321.5 19.8 256 294-572 7-279 (303)
117 cd05094 PTKc_TrkC Catalytic do 100.0 9.3E-38 2E-42 318.1 21.1 258 294-573 5-282 (291)
118 cd05063 PTKc_EphR_A2 Catalytic 100.0 8.4E-38 1.8E-42 314.4 20.5 257 293-573 4-267 (268)
119 cd05095 PTKc_DDR2 Catalytic do 100.0 1.6E-37 3.6E-42 317.1 23.0 266 293-572 4-296 (296)
120 cd05573 STKc_ROCK_NDR_like Cat 100.0 1E-38 2.3E-43 334.0 14.4 253 294-569 1-285 (350)
121 cd05618 STKc_aPKC_iota Catalyt 100.0 6.2E-38 1.3E-42 324.9 20.0 246 300-563 1-250 (329)
122 cd05075 PTKc_Axl Catalytic dom 100.0 1.5E-37 3.2E-42 313.2 22.2 256 296-572 1-270 (272)
123 cd05595 STKc_PKB_beta Catalyti 100.0 7.4E-38 1.6E-42 323.6 20.4 242 300-568 1-250 (323)
124 cd05050 PTKc_Musk Catalytic do 100.0 7.3E-38 1.6E-42 318.4 19.9 260 292-572 3-288 (288)
125 cd05035 PTKc_Axl_like Catalyti 100.0 1.6E-37 3.5E-42 312.9 22.2 257 296-573 1-272 (273)
126 cd05593 STKc_PKB_gamma Catalyt 100.0 3.7E-38 8E-43 326.4 17.9 243 300-569 1-251 (328)
127 cd05596 STKc_ROCK Catalytic do 100.0 1.9E-38 4.2E-43 333.8 15.8 257 290-569 39-304 (370)
128 cd06619 PKc_MKK5 Catalytic dom 100.0 1.2E-37 2.6E-42 315.4 20.8 252 294-569 1-253 (279)
129 KOG1989 ARK protein kinase fam 100.0 3.3E-38 7.3E-43 339.0 17.4 263 290-577 33-315 (738)
130 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.1E-37 2.4E-42 321.1 20.4 263 290-573 8-293 (314)
131 KOG0199 ACK and related non-re 100.0 1.9E-38 4.1E-43 328.0 14.5 251 294-568 110-367 (1039)
132 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.9E-38 1.9E-42 325.7 19.8 263 291-573 4-339 (343)
133 cd05601 STKc_CRIK Catalytic do 100.0 4.2E-38 9E-43 326.7 17.2 253 294-568 1-262 (330)
134 cd05584 STKc_p70S6K Catalytic 100.0 7.2E-38 1.6E-42 323.7 18.7 242 300-568 2-255 (323)
135 cd05047 PTKc_Tie Catalytic dom 100.0 2.3E-37 5.1E-42 311.6 21.7 251 300-573 1-268 (270)
136 cd05621 STKc_ROCK2 Catalytic d 100.0 4.5E-38 9.7E-43 330.7 16.9 260 287-569 36-304 (370)
137 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3E-37 6.4E-42 313.2 22.3 264 294-573 4-283 (284)
138 cd05073 PTKc_Hck Catalytic dom 100.0 1.8E-37 3.8E-42 310.7 20.4 256 291-572 3-259 (260)
139 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-37 4E-42 310.8 20.6 252 294-569 2-260 (263)
140 cd05065 PTKc_EphR_B Catalytic 100.0 1.6E-37 3.5E-42 312.5 20.2 255 294-572 4-267 (269)
141 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.4E-37 7.4E-42 310.2 22.5 255 300-571 1-268 (269)
142 cd05039 PTKc_Csk_like Catalyti 100.0 2.9E-37 6.2E-42 308.3 21.6 250 293-572 5-255 (256)
143 cd05592 STKc_nPKC_theta_delta 100.0 1.1E-37 2.5E-42 321.1 18.8 239 300-565 1-243 (316)
144 KOG0580 Serine/threonine prote 100.0 1.8E-38 3.9E-43 291.0 11.3 251 292-569 20-273 (281)
145 cd05605 STKc_GRK4_like Catalyt 100.0 1.6E-37 3.4E-42 315.5 19.4 252 295-568 1-260 (285)
146 cd05626 STKc_LATS2 Catalytic d 100.0 8.4E-38 1.8E-42 330.6 18.1 252 295-568 2-304 (381)
147 cd05607 STKc_GRK7 Catalytic do 100.0 2E-37 4.3E-42 313.4 19.7 254 302-576 1-257 (277)
148 cd08529 STKc_FA2-like Catalyti 100.0 3.5E-37 7.5E-42 307.4 21.2 251 295-569 1-253 (256)
149 cd05112 PTKc_Itk Catalytic dom 100.0 3.1E-37 6.7E-42 308.0 20.8 252 294-571 4-256 (256)
150 cd05599 STKc_NDR_like Catalyti 100.0 6.2E-38 1.3E-42 329.9 16.6 252 294-568 1-295 (364)
151 cd05628 STKc_NDR1 Catalytic do 100.0 1.2E-37 2.7E-42 327.3 18.8 201 294-501 1-238 (363)
152 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.5E-37 3.3E-42 315.4 18.8 264 294-573 4-283 (284)
153 cd05092 PTKc_TrkA Catalytic do 100.0 2.6E-37 5.6E-42 313.0 20.4 257 294-572 5-280 (280)
154 cd07853 STKc_NLK Catalytic dom 100.0 2.8E-37 6.1E-42 325.8 21.3 262 295-569 1-288 (372)
155 cd05060 PTKc_Syk_like Catalyti 100.0 3.9E-37 8.5E-42 307.5 21.2 248 300-573 1-255 (257)
156 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.2E-37 4.7E-42 321.8 20.1 265 289-574 7-294 (334)
157 PTZ00036 glycogen synthase kin 100.0 1.2E-37 2.6E-42 334.4 18.7 261 292-567 64-349 (440)
158 cd05590 STKc_nPKC_eta Catalyti 100.0 1.2E-37 2.6E-42 321.5 18.0 239 300-565 1-243 (320)
159 cd05589 STKc_PKN Catalytic dom 100.0 1.3E-37 2.8E-42 322.0 18.0 240 296-563 1-246 (324)
160 KOG0594 Protein kinase PCTAIRE 100.0 9.3E-38 2E-42 304.9 15.7 267 294-569 11-302 (323)
161 cd05587 STKc_cPKC Catalytic do 100.0 1.5E-37 3.3E-42 321.5 18.4 242 295-563 1-246 (324)
162 cd05040 PTKc_Ack_like Catalyti 100.0 3.1E-37 6.7E-42 308.2 19.9 249 300-571 1-256 (257)
163 cd08219 STKc_Nek3 Catalytic do 100.0 3E-37 6.4E-42 308.0 19.7 251 295-569 1-252 (255)
164 cd05056 PTKc_FAK Catalytic dom 100.0 2.9E-37 6.4E-42 310.8 19.8 256 293-573 5-265 (270)
165 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.9E-37 4.2E-42 318.6 18.6 263 294-568 6-285 (309)
166 cd05591 STKc_nPKC_epsilon Cata 100.0 3.1E-37 6.8E-42 318.7 20.1 241 300-567 1-252 (321)
167 cd05082 PTKc_Csk Catalytic dom 100.0 5.8E-37 1.3E-41 306.1 21.4 248 294-572 6-255 (256)
168 cd05041 PTKc_Fes_like Catalyti 100.0 6.5E-37 1.4E-41 304.7 21.5 249 300-572 1-251 (251)
169 cd06615 PKc_MEK Catalytic doma 100.0 3.3E-37 7.2E-42 316.7 19.9 262 294-569 1-287 (308)
170 cd05594 STKc_PKB_alpha Catalyt 100.0 7.3E-38 1.6E-42 324.0 15.1 242 300-568 1-251 (325)
171 cd00192 PTKc Catalytic domain 100.0 6.6E-37 1.4E-41 306.0 21.5 251 300-571 1-262 (262)
172 cd05046 PTK_CCK4 Pseudokinase 100.0 3.9E-37 8.6E-42 310.7 20.0 258 294-571 5-274 (275)
173 cd05044 PTKc_c-ros Catalytic d 100.0 3.5E-37 7.6E-42 310.0 19.3 252 300-572 1-269 (269)
174 cd05622 STKc_ROCK1 Catalytic d 100.0 1.6E-37 3.6E-42 326.7 17.5 261 286-569 35-304 (371)
175 KOG0660 Mitogen-activated prot 100.0 1.4E-37 3.1E-42 302.4 15.4 263 292-568 20-309 (359)
176 cd08528 STKc_Nek10 Catalytic d 100.0 5.8E-37 1.3E-41 308.4 20.5 255 295-571 1-268 (269)
177 cd06646 STKc_MAP4K5 Catalytic 100.0 6.1E-37 1.3E-41 307.9 20.6 255 293-570 8-266 (267)
178 cd05058 PTKc_Met_Ron Catalytic 100.0 7.7E-37 1.7E-41 306.2 21.2 250 300-573 1-259 (262)
179 cd05570 STKc_PKC Catalytic dom 100.0 3E-37 6.5E-42 318.4 18.7 242 300-568 1-251 (318)
180 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.6E-37 1.2E-41 311.2 20.3 259 293-569 4-266 (284)
181 PRK13184 pknD serine/threonine 100.0 4.7E-37 1E-41 342.6 21.4 261 294-573 2-290 (932)
182 cd05619 STKc_nPKC_theta Cataly 100.0 3.9E-37 8.4E-42 317.1 19.3 240 300-566 1-245 (316)
183 cd05617 STKc_aPKC_zeta Catalyt 100.0 7.2E-37 1.6E-41 316.8 21.3 245 300-564 1-249 (327)
184 PF00069 Pkinase: Protein kina 100.0 5.4E-37 1.2E-41 306.7 19.7 253 296-568 1-256 (260)
185 cd05616 STKc_cPKC_beta Catalyt 100.0 2.5E-37 5.3E-42 319.8 17.7 242 295-563 1-246 (323)
186 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.4E-36 3E-41 305.6 22.6 254 301-571 2-267 (268)
187 cd05629 STKc_NDR_like_fungal C 100.0 3.4E-37 7.3E-42 325.7 18.6 253 294-569 1-305 (377)
188 cd05110 PTKc_HER4 Catalytic do 100.0 5.9E-37 1.3E-41 314.1 19.9 256 293-573 6-268 (303)
189 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.4E-37 1.2E-41 311.0 19.4 264 294-573 4-283 (284)
190 cd05057 PTKc_EGFR_like Catalyt 100.0 1E-36 2.2E-41 308.4 21.3 256 293-573 6-268 (279)
191 cd05582 STKc_RSK_N N-terminal 100.0 6.8E-38 1.5E-42 323.3 12.7 239 300-565 2-245 (318)
192 KOG0611 Predicted serine/threo 100.0 7.9E-38 1.7E-42 305.2 12.3 249 293-570 52-304 (668)
193 cd06609 STKc_MST3_like Catalyt 100.0 1E-36 2.2E-41 307.6 20.9 248 294-568 1-250 (274)
194 cd05042 PTKc_Aatyk Catalytic d 100.0 9.9E-37 2.1E-41 306.8 20.5 254 301-571 2-268 (269)
195 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-36 2.7E-41 310.6 21.5 249 294-568 20-269 (296)
196 cd06637 STKc_TNIK Catalytic do 100.0 6.3E-37 1.4E-41 308.6 18.8 252 292-568 4-268 (272)
197 cd05620 STKc_nPKC_delta Cataly 100.0 5E-37 1.1E-41 316.4 18.4 241 300-567 1-246 (316)
198 cd06642 STKc_STK25-YSK1 Cataly 100.0 6.7E-37 1.4E-41 309.5 18.9 248 295-569 5-253 (277)
199 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.9E-36 4.1E-41 307.9 22.2 262 294-568 1-265 (287)
200 PHA03211 serine/threonine kina 100.0 1.8E-36 3.8E-41 324.4 23.0 264 292-569 167-455 (461)
201 cd05598 STKc_LATS Catalytic do 100.0 1.7E-37 3.6E-42 328.0 14.8 252 295-569 2-301 (376)
202 cd05625 STKc_LATS1 Catalytic d 100.0 2.4E-37 5.2E-42 327.5 15.8 251 295-568 2-304 (382)
203 cd06612 STKc_MST1_2 Catalytic 100.0 1.6E-36 3.6E-41 302.5 21.0 250 293-568 2-252 (256)
204 cd05575 STKc_SGK Catalytic dom 100.0 3.5E-37 7.6E-42 318.6 16.7 243 300-569 1-247 (323)
205 cd05630 STKc_GRK6 Catalytic do 100.0 8.4E-37 1.8E-41 310.1 18.9 252 295-568 1-260 (285)
206 cd05597 STKc_DMPK_like Catalyt 100.0 9.8E-37 2.1E-41 316.3 19.7 256 294-569 1-266 (331)
207 cd06640 STKc_MST4 Catalytic do 100.0 3.1E-36 6.6E-41 304.7 22.5 249 294-569 4-253 (277)
208 cd07861 STKc_CDK1_euk Catalyti 100.0 1.8E-36 3.8E-41 307.5 20.5 264 295-568 1-281 (285)
209 KOG2052 Activin A type IB rece 100.0 3.5E-37 7.6E-42 305.3 14.7 261 290-573 207-503 (513)
210 smart00219 TyrKc Tyrosine kina 100.0 2.8E-36 6.1E-41 301.0 21.5 252 296-570 1-258 (258)
211 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.1E-36 4.5E-41 306.7 20.5 254 294-568 1-260 (283)
212 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.5E-36 5.4E-41 302.7 20.7 240 300-571 1-262 (262)
213 cd07863 STKc_CDK4 Catalytic do 100.0 1.2E-36 2.6E-41 309.3 18.7 262 295-568 1-284 (288)
214 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.6E-36 3.4E-41 310.7 19.5 262 294-568 6-285 (301)
215 cd08221 STKc_Nek9 Catalytic do 100.0 2.9E-36 6.2E-41 301.0 21.0 251 295-569 1-253 (256)
216 cd05083 PTKc_Chk Catalytic dom 100.0 2.4E-36 5.1E-41 301.3 20.3 247 294-572 6-253 (254)
217 cd05632 STKc_GRK5 Catalytic do 100.0 1.8E-36 3.9E-41 307.7 19.7 247 296-564 2-251 (285)
218 cd06624 STKc_ASK Catalytic dom 100.0 2.6E-36 5.6E-41 303.6 20.7 258 289-568 3-264 (268)
219 cd06631 STKc_YSK4 Catalytic do 100.0 1.5E-36 3.2E-41 304.7 18.8 251 295-568 1-261 (265)
220 cd07876 STKc_JNK2 Catalytic do 100.0 3.2E-36 6.9E-41 316.2 22.1 266 292-569 19-315 (359)
221 cd07868 STKc_CDK8 Catalytic do 100.0 4.4E-36 9.6E-41 309.7 22.8 197 299-502 6-219 (317)
222 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.8E-36 6.1E-41 303.0 20.8 249 295-568 1-263 (267)
223 cd06605 PKc_MAPKK Catalytic do 100.0 1.9E-36 4E-41 303.9 19.4 253 294-568 1-256 (265)
224 cd05604 STKc_SGK3 Catalytic do 100.0 5.6E-37 1.2E-41 317.4 16.1 251 300-577 1-255 (325)
225 cd05602 STKc_SGK1 Catalytic do 100.0 5.6E-37 1.2E-41 317.4 16.0 248 300-574 1-252 (325)
226 cd06638 STKc_myosinIIIA Cataly 100.0 1.6E-36 3.5E-41 308.1 19.1 261 287-569 11-283 (286)
227 cd05603 STKc_SGK2 Catalytic do 100.0 5.5E-37 1.2E-41 316.9 15.8 238 300-564 1-242 (321)
228 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-36 2.6E-41 314.5 18.2 243 295-564 1-247 (323)
229 cd07874 STKc_JNK3 Catalytic do 100.0 2.5E-36 5.3E-41 316.6 20.4 266 292-569 15-311 (355)
230 cd06656 STKc_PAK3 Catalytic do 100.0 4.6E-36 1E-40 306.5 21.8 250 293-568 18-268 (297)
231 cd08223 STKc_Nek4 Catalytic do 100.0 4.8E-36 1E-40 299.5 21.4 250 295-568 1-253 (257)
232 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.1E-36 6.6E-41 306.1 20.0 254 294-568 1-261 (286)
233 PHA03207 serine/threonine kina 100.0 2.8E-36 6.1E-41 320.0 20.6 263 292-569 90-375 (392)
234 KOG0032 Ca2+/calmodulin-depend 100.0 2.6E-36 5.6E-41 312.3 19.7 251 292-569 33-293 (382)
235 cd05624 STKc_MRCK_beta Catalyt 100.0 1.3E-36 2.8E-41 315.4 17.5 255 294-568 1-265 (331)
236 PHA03209 serine/threonine kina 100.0 9E-36 1.9E-40 312.2 23.8 193 291-499 63-256 (357)
237 cd05623 STKc_MRCK_alpha Cataly 100.0 1.7E-36 3.6E-41 314.8 18.1 256 294-569 1-266 (332)
238 cd07847 STKc_CDKL1_4 Catalytic 100.0 8.7E-36 1.9E-40 302.5 23.0 263 294-568 1-282 (286)
239 cd06651 STKc_MEKK3 Catalytic d 100.0 5E-36 1.1E-40 301.2 21.0 250 294-568 2-260 (266)
240 cd08227 PK_STRAD_alpha Pseudok 100.0 2E-36 4.4E-41 313.6 18.6 262 298-568 2-306 (327)
241 KOG0033 Ca2+/calmodulin-depend 100.0 2.3E-38 5E-43 290.5 3.6 252 293-568 10-266 (355)
242 cd08217 STKc_Nek2 Catalytic do 100.0 4.6E-36 9.9E-41 300.6 20.6 256 295-569 1-262 (265)
243 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.9E-36 1.1E-40 299.7 20.7 238 300-571 1-259 (259)
244 cd07846 STKc_CDKL2_3 Catalytic 100.0 2E-36 4.4E-41 307.3 18.1 263 294-568 1-282 (286)
245 cd05627 STKc_NDR2 Catalytic do 100.0 6.5E-37 1.4E-41 321.5 14.5 201 294-501 1-238 (360)
246 PTZ00266 NIMA-related protein 100.0 3.5E-36 7.5E-41 336.9 20.8 260 289-568 8-294 (1021)
247 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.9E-36 1.5E-40 301.6 21.0 239 301-571 2-274 (274)
248 cd07875 STKc_JNK1 Catalytic do 100.0 8.4E-36 1.8E-40 313.6 22.3 266 292-569 22-318 (364)
249 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.6E-36 1.9E-40 299.2 21.3 257 294-568 1-263 (267)
250 cd05074 PTKc_Tyro3 Catalytic d 100.0 7.8E-36 1.7E-40 300.8 20.8 257 296-573 1-272 (273)
251 KOG0200 Fibroblast/platelet-de 100.0 1.9E-36 4.1E-41 335.1 17.7 265 288-572 290-578 (609)
252 KOG0599 Phosphorylase kinase g 100.0 1.7E-36 3.6E-41 282.3 14.4 253 292-568 15-282 (411)
253 cd06639 STKc_myosinIIIB Cataly 100.0 4.5E-36 9.7E-41 305.7 19.1 261 286-568 14-286 (291)
254 cd06644 STKc_STK10_LOK Catalyt 100.0 1.9E-35 4.2E-40 301.2 23.7 252 293-568 11-268 (292)
255 cd06632 STKc_MEKK1_plant Catal 100.0 7.7E-36 1.7E-40 297.9 20.4 248 295-568 1-254 (258)
256 cd06613 STKc_MAP4K3_like Catal 100.0 1.5E-35 3.4E-40 296.6 22.5 253 294-568 3-259 (262)
257 cd06917 STKc_NAK1_like Catalyt 100.0 1.1E-35 2.3E-40 300.6 21.4 248 295-568 2-254 (277)
258 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.7E-36 3.8E-41 303.1 15.5 240 300-571 1-258 (258)
259 cd06655 STKc_PAK2 Catalytic do 100.0 6.6E-36 1.4E-40 305.2 20.1 249 294-568 19-268 (296)
260 cd06643 STKc_SLK Catalytic dom 100.0 8.8E-36 1.9E-40 302.1 20.7 249 296-568 7-261 (282)
261 cd07839 STKc_CDK5 Catalytic do 100.0 4.6E-36 9.9E-41 304.4 18.5 262 295-568 1-280 (284)
262 cd07867 STKc_CDC2L6 Catalytic 100.0 8.4E-36 1.8E-40 307.5 20.7 197 299-502 6-219 (317)
263 cd06652 STKc_MEKK2 Catalytic d 100.0 1.2E-35 2.5E-40 298.3 21.0 250 294-568 2-260 (265)
264 KOG0610 Putative serine/threon 100.0 4.6E-36 1E-40 295.3 17.6 288 291-604 74-419 (459)
265 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5E-36 1.1E-40 303.8 18.5 259 285-568 7-278 (282)
266 cd06645 STKc_MAP4K3 Catalytic 100.0 6E-36 1.3E-40 300.7 18.7 253 293-568 8-264 (267)
267 cd08218 STKc_Nek1 Catalytic do 100.0 7.8E-36 1.7E-40 297.9 19.3 250 295-568 1-252 (256)
268 cd06611 STKc_SLK_like Catalyti 100.0 7.2E-36 1.6E-40 302.4 19.2 252 293-568 4-261 (280)
269 cd07844 STKc_PCTAIRE_like Cata 100.0 6.5E-36 1.4E-40 304.5 19.0 264 294-568 5-287 (291)
270 cd06608 STKc_myosinIII_like Ca 100.0 1.2E-35 2.5E-40 299.5 20.1 255 292-568 4-271 (275)
271 cd06641 STKc_MST3 Catalytic do 100.0 1.6E-35 3.5E-40 299.4 21.1 248 295-569 5-253 (277)
272 KOG0584 Serine/threonine prote 100.0 8.7E-37 1.9E-41 315.2 11.9 245 298-568 44-295 (632)
273 cd07833 STKc_CDKL Catalytic do 100.0 5.8E-36 1.3E-40 304.1 17.9 264 294-568 1-284 (288)
274 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.8E-35 3.8E-40 298.1 21.0 254 295-568 2-268 (272)
275 KOG4717 Serine/threonine prote 100.0 3E-36 6.4E-41 302.0 15.0 249 294-569 18-270 (864)
276 cd05574 STKc_phototropin_like 100.0 1.4E-35 3.1E-40 305.7 20.7 259 294-574 1-290 (316)
277 cd06626 STKc_MEKK4 Catalytic d 100.0 1.7E-35 3.7E-40 296.6 20.6 252 295-568 1-260 (264)
278 cd06630 STKc_MEKK1 Catalytic d 100.0 2.2E-35 4.7E-40 296.6 21.2 253 295-568 1-263 (268)
279 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.9E-35 4.1E-40 308.4 21.5 261 291-568 12-297 (343)
280 cd06623 PKc_MAPKK_plant_like C 100.0 2.1E-35 4.6E-40 295.8 21.0 252 294-568 1-255 (264)
281 cd07860 STKc_CDK2_3 Catalytic 100.0 1.8E-35 3.8E-40 300.1 20.2 262 295-568 1-280 (284)
282 cd07832 STKc_CCRK Catalytic do 100.0 2.3E-35 5E-40 299.4 21.1 263 295-568 1-281 (286)
283 KOG0574 STE20-like serine/thre 100.0 1.9E-37 4.1E-42 292.0 5.1 249 295-569 34-283 (502)
284 KOG0577 Serine/threonine prote 100.0 1.7E-36 3.7E-41 308.1 12.3 245 295-568 27-277 (948)
285 cd08220 STKc_Nek8 Catalytic do 100.0 2.6E-35 5.7E-40 293.9 20.8 249 295-568 1-252 (256)
286 cd06616 PKc_MKK4 Catalytic dom 100.0 1.4E-35 3E-40 301.6 18.9 257 295-569 5-267 (288)
287 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2E-35 4.3E-40 300.9 20.2 266 292-568 3-287 (291)
288 KOG0596 Dual specificity; seri 100.0 2.9E-36 6.3E-41 305.5 13.4 254 291-568 358-626 (677)
289 cd05586 STKc_Sck1_like Catalyt 100.0 3.5E-36 7.6E-41 312.2 14.3 245 302-572 1-252 (330)
290 PTZ00284 protein kinase; Provi 100.0 1.7E-35 3.7E-40 321.1 20.2 265 288-568 123-437 (467)
291 cd05609 STKc_MAST Catalytic do 100.0 3.2E-35 7E-40 301.5 21.0 257 294-573 1-274 (305)
292 cd07841 STKc_CDK7 Catalytic do 100.0 5.3E-35 1.2E-39 298.8 21.9 263 295-569 1-282 (298)
293 cd06658 STKc_PAK5 Catalytic do 100.0 2.4E-35 5.3E-40 300.4 19.2 246 298-569 26-272 (292)
294 cd07843 STKc_CDC2L1 Catalytic 100.0 3.2E-35 6.9E-40 299.7 19.8 266 294-568 5-289 (293)
295 cd08530 STKc_CNK2-like Catalyt 100.0 3.1E-35 6.7E-40 293.2 18.9 250 295-568 1-252 (256)
296 cd06607 STKc_TAO Catalytic dom 100.0 6.8E-35 1.5E-39 299.4 21.9 248 293-569 14-267 (307)
297 cd07836 STKc_Pho85 Catalytic d 100.0 4.8E-35 1E-39 296.8 20.5 264 295-568 1-280 (284)
298 KOG4279 Serine/threonine prote 100.0 5.3E-36 1.2E-40 309.2 13.0 246 301-568 582-831 (1226)
299 cd08225 STKc_Nek5 Catalytic do 100.0 3.6E-35 7.9E-40 293.0 18.7 250 295-568 1-253 (257)
300 cd06647 STKc_PAK_I Catalytic d 100.0 7.4E-35 1.6E-39 297.1 21.3 250 294-569 19-269 (293)
301 cd06614 STKc_PAK Catalytic dom 100.0 6.3E-35 1.4E-39 296.5 20.5 252 292-568 17-269 (286)
302 cd07835 STKc_CDK1_like Catalyt 100.0 6.3E-35 1.4E-39 295.9 20.2 262 296-568 1-279 (283)
303 cd05580 STKc_PKA Catalytic dom 100.0 9.7E-35 2.1E-39 295.8 21.5 244 294-567 1-252 (290)
304 cd07837 STKc_CdkB_plant Cataly 100.0 1.2E-34 2.7E-39 295.6 22.2 266 294-568 1-290 (295)
305 cd07840 STKc_CDK9_like Catalyt 100.0 1E-34 2.2E-39 294.7 21.4 262 296-568 1-283 (287)
306 cd06659 STKc_PAK6 Catalytic do 100.0 7.9E-35 1.7E-39 297.4 20.4 245 298-568 25-270 (297)
307 cd05572 STKc_cGK_PKG Catalytic 100.0 8.6E-35 1.9E-39 291.4 20.3 243 302-568 1-251 (262)
308 KOG0986 G protein-coupled rece 100.0 3.8E-36 8.2E-41 297.9 10.2 259 283-563 173-435 (591)
309 cd08215 STKc_Nek Catalytic dom 100.0 1.1E-34 2.4E-39 289.2 20.9 252 295-568 1-254 (258)
310 PHA02882 putative serine/threo 100.0 1.4E-34 3E-39 295.2 21.9 260 292-571 10-294 (294)
311 PHA03210 serine/threonine kina 100.0 2.7E-35 5.9E-40 321.0 17.5 272 292-568 146-453 (501)
312 cd05578 STKc_Yank1 Catalytic d 100.0 3.1E-35 6.7E-40 294.0 16.5 248 295-567 1-253 (258)
313 cd07842 STKc_CDK8_like Catalyt 100.0 1.4E-34 2.9E-39 298.3 21.7 270 295-568 1-312 (316)
314 cd07849 STKc_ERK1_2_like Catal 100.0 3.7E-35 7.9E-40 305.3 17.5 263 293-569 4-292 (336)
315 cd05122 PKc_STE Catalytic doma 100.0 1.7E-34 3.7E-39 286.6 21.0 249 295-568 1-250 (253)
316 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.6E-34 3.5E-39 289.9 20.7 250 294-568 2-260 (264)
317 cd07831 STKc_MOK Catalytic dom 100.0 1.5E-34 3.3E-39 292.8 20.7 258 296-568 1-278 (282)
318 KOG1035 eIF-2alpha kinase GCN2 100.0 3E-35 6.4E-40 322.2 16.0 256 290-568 475-870 (1351)
319 KOG0667 Dual-specificity tyros 100.0 7.7E-35 1.7E-39 303.7 18.4 196 295-502 187-391 (586)
320 cd06618 PKc_MKK7 Catalytic dom 100.0 1.4E-34 3E-39 295.5 19.7 254 292-569 13-273 (296)
321 cd06648 STKc_PAK_II Catalytic 100.0 2E-34 4.3E-39 292.7 20.5 247 296-568 21-268 (285)
322 cd06606 STKc_MAPKKK Catalytic 100.0 3.3E-34 7.2E-39 285.7 21.6 251 295-568 1-256 (260)
323 cd07864 STKc_CDK12 Catalytic d 100.0 2E-34 4.4E-39 295.0 20.4 265 291-568 4-298 (302)
324 cd07850 STKc_JNK Catalytic dom 100.0 3.2E-34 6.9E-39 300.3 22.2 265 292-568 14-310 (353)
325 cd05577 STKc_GRK Catalytic dom 100.0 1.5E-34 3.3E-39 292.2 18.9 249 302-572 1-253 (277)
326 cd05633 STKc_GRK3 Catalytic do 100.0 2.7E-34 5.8E-39 290.8 20.2 242 301-568 1-254 (279)
327 cd06635 STKc_TAO1 Catalytic do 100.0 3.3E-34 7.1E-39 295.7 21.1 248 296-572 27-280 (317)
328 cd05583 STKc_MSK_N N-terminal 100.0 2.1E-34 4.6E-39 292.9 18.9 257 295-573 1-267 (288)
329 PLN00009 cyclin-dependent kina 100.0 2.1E-34 4.5E-39 293.8 18.8 264 294-568 2-283 (294)
330 cd05579 STKc_MAST_like Catalyt 100.0 1.7E-34 3.6E-39 289.2 17.7 247 302-572 1-257 (265)
331 KOG4250 TANK binding protein k 100.0 6.2E-35 1.3E-39 305.1 14.9 258 296-561 15-296 (732)
332 cd08226 PK_STRAD_beta Pseudoki 100.0 2.8E-34 6.1E-39 297.6 19.9 260 300-568 4-307 (328)
333 cd07865 STKc_CDK9 Catalytic do 100.0 4.1E-34 8.9E-39 293.8 20.8 264 293-568 11-306 (310)
334 cd07845 STKc_CDK10 Catalytic d 100.0 5.6E-34 1.2E-38 292.9 21.5 264 293-568 6-289 (309)
335 cd07852 STKc_MAPK15 Catalytic 100.0 3.4E-34 7.4E-39 298.2 20.0 267 292-569 5-295 (337)
336 cd08222 STKc_Nek11 Catalytic d 100.0 2.8E-34 6.1E-39 287.4 18.6 251 295-568 1-256 (260)
337 cd05613 STKc_MSK1_N N-terminal 100.0 4.1E-34 8.8E-39 291.1 20.0 245 295-561 1-255 (290)
338 cd08216 PK_STRAD Pseudokinase 100.0 3.6E-34 7.8E-39 295.0 19.6 260 299-568 7-294 (314)
339 cd07830 STKc_MAK_like Catalyti 100.0 3.6E-34 7.7E-39 290.3 19.3 265 296-568 1-279 (283)
340 KOG0579 Ste20-like serine/thre 100.0 2E-35 4.3E-40 302.0 9.8 251 294-568 32-288 (1187)
341 cd05118 STKc_CMGC Catalytic do 100.0 9.6E-34 2.1E-38 287.0 21.9 261 296-568 1-279 (283)
342 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.6E-34 1.2E-38 295.2 20.2 266 290-569 6-288 (328)
343 cd06627 STKc_Cdc7_like Catalyt 100.0 7.7E-34 1.7E-38 282.7 20.3 248 295-568 1-250 (254)
344 cd07855 STKc_ERK5 Catalytic do 100.0 3E-34 6.5E-39 298.2 18.1 263 293-568 4-293 (334)
345 cd06634 STKc_TAO2 Catalytic do 100.0 7.1E-34 1.5E-38 291.9 20.2 248 295-571 16-269 (308)
346 PHA03390 pk1 serine/threonine- 100.0 2.2E-33 4.8E-38 282.2 23.0 245 291-568 11-261 (267)
347 cd07838 STKc_CDK4_6_like Catal 100.0 2.1E-33 4.5E-38 285.1 23.0 261 296-568 1-283 (287)
348 cd07834 STKc_MAPK Catalytic do 100.0 7E-34 1.5E-38 295.0 19.3 261 295-568 1-288 (330)
349 cd06657 STKc_PAK4 Catalytic do 100.0 6.8E-34 1.5E-38 289.7 18.9 243 300-568 26-269 (292)
350 KOG4645 MAPKKK (MAP kinase kin 100.0 1.7E-35 3.6E-40 325.6 7.1 251 295-569 1236-1494(1509)
351 cd05611 STKc_Rim15_like Cataly 100.0 6.2E-34 1.3E-38 284.9 17.8 246 300-572 2-251 (260)
352 KOG1024 Receptor-like protein 100.0 9.4E-35 2E-39 282.9 11.2 265 287-572 277-554 (563)
353 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4E-34 8.7E-39 297.6 16.9 262 293-569 4-291 (337)
354 KOG0983 Mitogen-activated prot 100.0 2.9E-34 6.3E-39 267.6 13.8 248 298-568 96-348 (391)
355 cd05581 STKc_PDK1 Catalytic do 100.0 4.9E-34 1.1E-38 288.6 16.8 249 294-568 1-276 (280)
356 cd05606 STKc_beta_ARK Catalyti 100.0 1.7E-33 3.7E-38 284.7 20.7 242 301-568 1-254 (278)
357 cd06633 STKc_TAO3 Catalytic do 100.0 2.7E-33 5.8E-38 288.3 21.1 245 296-569 23-273 (313)
358 cd07866 STKc_BUR1 Catalytic do 100.0 2.5E-33 5.5E-38 288.0 20.5 265 293-568 7-307 (311)
359 KOG0586 Serine/threonine prote 100.0 4.7E-34 1E-38 294.8 14.6 250 292-569 54-306 (596)
360 cd07879 STKc_p38delta_MAPK13 C 100.0 2.1E-33 4.6E-38 292.7 19.8 263 293-573 14-303 (342)
361 cd07829 STKc_CDK_like Catalyti 100.0 2.7E-33 5.8E-38 283.6 19.5 261 296-568 1-278 (282)
362 PTZ00024 cyclin-dependent prot 100.0 6.5E-33 1.4E-37 288.4 21.8 263 294-568 8-312 (335)
363 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.3E-33 1.8E-37 288.6 22.1 266 287-569 10-300 (345)
364 KOG0690 Serine/threonine prote 100.0 2.1E-34 4.5E-39 274.2 9.0 242 293-561 167-411 (516)
365 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.7E-33 2.1E-37 287.8 21.8 259 292-568 13-297 (343)
366 KOG1006 Mitogen-activated prot 100.0 3.8E-35 8.1E-40 272.6 2.7 255 298-569 68-327 (361)
367 cd07854 STKc_MAPK4_6 Catalytic 100.0 4E-33 8.8E-38 290.6 18.1 261 294-568 5-299 (342)
368 cd07857 STKc_MPK1 Catalytic do 100.0 1.7E-32 3.7E-37 284.8 22.6 265 295-567 1-290 (332)
369 KOG0612 Rho-associated, coiled 100.0 7.8E-34 1.7E-38 308.7 12.1 259 286-567 67-336 (1317)
370 cd07851 STKc_p38 Catalytic dom 100.0 7.7E-33 1.7E-37 288.6 18.9 260 292-568 13-297 (343)
371 cd05123 STKc_AGC Catalytic dom 100.0 1.1E-32 2.4E-37 273.9 18.3 237 302-565 1-240 (250)
372 KOG0666 Cyclin C-dependent kin 100.0 3.2E-33 7E-38 264.9 12.1 208 292-503 22-244 (438)
373 KOG0607 MAP kinase-interacting 100.0 1.3E-32 2.8E-37 261.7 15.6 255 299-568 83-360 (463)
374 KOG0604 MAP kinase-activated p 100.0 3E-33 6.5E-38 264.1 10.0 254 292-569 59-322 (400)
375 cd05610 STKc_MASTL Catalytic d 100.0 3.2E-32 6.8E-37 306.0 18.8 146 294-446 4-152 (669)
376 cd05576 STKc_RPK118_like Catal 100.0 4.2E-32 9.1E-37 267.9 17.0 220 305-564 4-224 (237)
377 KOG0984 Mitogen-activated prot 100.0 9.4E-33 2E-37 247.7 9.5 211 287-502 39-255 (282)
378 KOG0696 Serine/threonine prote 100.0 7E-33 1.5E-37 271.3 9.3 244 291-561 346-593 (683)
379 KOG0662 Cyclin-dependent kinas 100.0 4.4E-32 9.6E-37 238.0 13.1 262 295-568 3-282 (292)
380 smart00220 S_TKc Serine/Threon 100.0 2.9E-31 6.4E-36 261.5 19.3 239 306-568 1-240 (244)
381 KOG0603 Ribosomal protein S6 k 100.0 3.6E-32 7.8E-37 282.3 12.6 239 293-568 321-562 (612)
382 PLN03225 Serine/threonine-prot 100.0 2.6E-31 5.6E-36 291.4 19.3 264 292-569 130-450 (566)
383 KOG4236 Serine/threonine prote 100.0 2.7E-32 5.8E-37 274.3 9.9 246 299-569 569-819 (888)
384 PLN03224 probable serine/threo 100.0 4.2E-31 9.1E-36 282.6 19.5 263 292-568 143-499 (507)
385 KOG1151 Tousled-like protein k 100.0 3.2E-32 6.8E-37 268.7 7.0 258 291-567 460-739 (775)
386 KOG0669 Cyclin T-dependent kin 100.0 2.3E-32 4.9E-37 252.1 4.4 265 295-568 18-314 (376)
387 KOG0587 Traf2- and Nck-interac 100.0 1.1E-30 2.3E-35 278.4 16.2 258 287-568 12-281 (953)
388 KOG0671 LAMMER dual specificit 100.0 5.3E-31 1.1E-35 257.3 11.1 260 292-568 87-405 (415)
389 KOG1027 Serine/threonine prote 100.0 2.5E-31 5.4E-36 281.9 9.4 246 296-568 511-766 (903)
390 KOG0695 Serine/threonine prote 100.0 1.6E-30 3.5E-35 248.5 12.8 253 290-561 246-502 (593)
391 KOG0614 cGMP-dependent protein 100.0 6.2E-31 1.3E-35 263.8 5.9 244 293-562 419-665 (732)
392 KOG0664 Nemo-like MAPK-related 100.0 1.9E-30 4.2E-35 241.8 5.8 266 297-571 56-345 (449)
393 cd00180 PKc Catalytic domain o 100.0 6.3E-28 1.4E-32 231.8 20.7 211 302-569 1-214 (215)
394 KOG0608 Warts/lats-like serine 100.0 6.4E-29 1.4E-33 254.9 13.0 204 294-504 629-876 (1034)
395 KOG0668 Casein kinase II, alph 100.0 6.5E-29 1.4E-33 226.3 10.4 261 292-568 36-321 (338)
396 KOG1152 Signal transduction se 100.0 9.7E-29 2.1E-33 251.8 8.8 196 295-500 562-770 (772)
397 smart00221 STYKc Protein kinas 100.0 2.9E-27 6.3E-32 230.5 18.9 200 296-501 1-202 (225)
398 KOG1290 Serine/threonine prote 99.9 4.4E-27 9.5E-32 235.8 18.9 133 292-431 76-221 (590)
399 KOG0665 Jun-N-terminal kinase 99.9 6.1E-28 1.3E-32 230.7 10.4 257 293-569 16-310 (369)
400 KOG1345 Serine/threonine kinas 99.9 9.2E-27 2E-31 217.4 9.8 254 293-571 23-286 (378)
401 KOG1167 Serine/threonine prote 99.9 1.2E-26 2.6E-31 230.0 11.2 267 289-568 31-380 (418)
402 KOG0576 Mitogen-activated prot 99.9 1.5E-27 3.2E-32 247.1 4.7 253 293-568 14-270 (829)
403 KOG0195 Integrin-linked kinase 99.9 6.1E-27 1.3E-31 218.4 5.6 247 299-573 195-446 (448)
404 KOG0670 U4/U6-associated splic 99.9 2.2E-26 4.8E-31 231.8 9.5 209 284-502 422-638 (752)
405 PLN00181 protein SPA1-RELATED; 99.9 3.7E-26 8.1E-31 263.2 9.8 194 348-568 29-264 (793)
406 smart00750 KIND kinase non-cat 99.9 9.7E-25 2.1E-29 204.8 13.3 166 376-572 1-168 (176)
407 KOG1164 Casein kinase (serine/ 99.9 3.7E-23 8.1E-28 213.0 19.8 257 295-572 19-296 (322)
408 PRK09188 serine/threonine prot 99.9 1.3E-23 2.9E-28 215.8 15.0 167 291-474 15-195 (365)
409 KOG1163 Casein kinase (serine/ 99.9 4.7E-23 1E-27 189.6 9.7 261 292-573 13-284 (341)
410 COG0515 SPS1 Serine/threonine 99.9 6.2E-21 1.3E-25 196.2 22.5 262 296-569 2-275 (384)
411 KOG1165 Casein kinase (serine/ 99.9 6.5E-21 1.4E-25 183.3 16.1 258 294-572 28-298 (449)
412 KOG0590 Checkpoint kinase and 99.8 3.2E-22 6.9E-27 219.0 5.0 254 297-568 321-584 (601)
413 PLN03150 hypothetical protein; 99.8 3E-21 6.5E-26 214.4 11.1 158 34-216 371-538 (623)
414 PLN00113 leucine-rich repeat r 99.8 6.2E-21 1.4E-25 225.8 13.9 171 34-205 28-224 (968)
415 cd05147 RIO1_euk RIO kinase fa 99.8 1.4E-20 3E-25 178.0 12.1 140 299-448 2-167 (190)
416 KOG1240 Protein kinase contain 99.8 5.4E-21 1.2E-25 208.6 10.0 261 295-582 24-304 (1431)
417 PRK10359 lipopolysaccharide co 99.8 1.6E-20 3.4E-25 179.5 9.4 173 291-493 28-216 (232)
418 KOG1023 Natriuretic peptide re 99.8 3.5E-20 7.7E-25 193.7 11.5 215 346-574 2-225 (484)
419 cd05145 RIO1_like RIO kinase f 99.8 1.8E-19 4E-24 170.9 14.8 140 299-449 2-168 (190)
420 PF14531 Kinase-like: Kinase-l 99.8 1.6E-19 3.5E-24 177.8 14.2 233 296-560 14-288 (288)
421 PRK12274 serine/threonine prot 99.8 2.5E-19 5.5E-24 167.5 14.6 184 298-500 6-208 (218)
422 KOG0603 Ribosomal protein S6 k 99.8 4.4E-20 9.5E-25 192.7 4.4 236 301-573 1-244 (612)
423 KOG1166 Mitotic checkpoint ser 99.8 2.2E-18 4.7E-23 192.3 14.7 201 287-498 691-902 (974)
424 KOG4158 BRPK/PTEN-induced prot 99.7 9.4E-18 2E-22 165.1 12.4 254 292-571 155-512 (598)
425 PRK10345 hypothetical protein; 99.7 2.1E-17 4.6E-22 157.7 13.8 136 297-445 5-156 (210)
426 smart00090 RIO RIO-like kinase 99.7 3.1E-17 6.7E-22 160.5 13.1 142 295-448 29-198 (237)
427 PRK14879 serine/threonine prot 99.7 5.2E-17 1.1E-21 157.1 13.7 135 300-447 2-143 (211)
428 cd05144 RIO2_C RIO kinase fami 99.7 5.1E-17 1.1E-21 155.4 13.4 144 289-449 10-176 (198)
429 TIGR03724 arch_bud32 Kae1-asso 99.7 4.6E-17 1E-21 155.9 12.7 131 301-447 1-138 (199)
430 KOG1033 eIF-2alpha kinase PEK/ 99.7 5.6E-18 1.2E-22 173.8 4.6 175 365-566 330-509 (516)
431 PRK09605 bifunctional UGMP fam 99.7 7.2E-17 1.6E-21 177.6 12.5 140 291-447 330-476 (535)
432 KOG0606 Microtubule-associated 99.7 1.5E-17 3.2E-22 182.1 6.1 212 292-564 81-307 (1205)
433 cd05120 APH_ChoK_like Aminogly 99.6 6E-15 1.3E-19 134.0 13.5 135 298-447 2-138 (155)
434 cd05119 RIO RIO kinase family, 99.6 3.6E-15 7.9E-20 141.2 12.1 137 299-449 2-165 (187)
435 KOG0617 Ras suppressor protein 99.6 9.9E-17 2.1E-21 140.7 -0.3 129 75-207 32-161 (264)
436 PRK01723 3-deoxy-D-manno-octul 99.5 5.8E-14 1.3E-18 137.7 13.2 136 299-447 36-191 (239)
437 KOG0590 Checkpoint kinase and 99.5 2.3E-15 5E-20 165.2 2.2 254 294-567 20-284 (601)
438 KOG4194 Membrane glycoprotein 99.5 1.5E-15 3.2E-20 156.3 -2.0 180 21-211 273-457 (873)
439 KOG0617 Ras suppressor protein 99.5 3.1E-15 6.8E-20 131.4 -0.5 129 75-207 55-187 (264)
440 KOG1266 Protein kinase [Signal 99.5 5.9E-14 1.3E-18 135.6 7.1 204 343-569 119-331 (458)
441 TIGR01982 UbiB 2-polyprenylphe 99.5 4.2E-13 9.1E-18 143.0 13.2 142 299-449 122-308 (437)
442 KOG4194 Membrane glycoprotein 99.4 3E-13 6.5E-18 139.5 5.8 177 20-207 128-331 (873)
443 KOG0472 Leucine-rich repeat pr 99.4 2.2E-14 4.7E-19 141.8 -3.2 124 77-206 184-310 (565)
444 KOG0444 Cytoskeletal regulator 99.3 2E-13 4.3E-18 141.6 -1.0 132 76-210 222-379 (1255)
445 cd05151 ChoK Choline Kinase (C 99.3 9.8E-12 2.1E-16 115.6 10.3 130 299-446 3-135 (170)
446 PRK04750 ubiB putative ubiquin 99.3 4.7E-12 1E-16 136.4 8.0 146 294-450 120-316 (537)
447 KOG0444 Cytoskeletal regulator 99.3 1E-12 2.3E-17 136.4 2.2 109 77-189 269-378 (1255)
448 KOG4237 Extracellular matrix p 99.3 6.9E-13 1.5E-17 131.2 0.7 144 70-214 51-209 (498)
449 KOG0601 Cyclin-dependent kinas 99.3 6.3E-12 1.4E-16 132.1 7.9 247 295-567 115-377 (524)
450 KOG1243 Protein kinase [Genera 99.3 1.3E-10 2.8E-15 123.4 17.0 233 315-577 34-267 (690)
451 KOG4237 Extracellular matrix p 99.3 2.6E-13 5.7E-18 134.1 -2.9 187 22-211 96-364 (498)
452 KOG0472 Leucine-rich repeat pr 99.2 6.8E-13 1.5E-17 131.4 -1.4 127 77-206 389-541 (565)
453 PLN03150 hypothetical protein; 99.2 5.2E-12 1.1E-16 140.8 4.1 95 101-195 419-513 (623)
454 KOG0618 Serine/threonine phosp 99.2 1.1E-12 2.4E-17 142.3 -1.2 174 18-205 311-488 (1081)
455 KOG0601 Cyclin-dependent kinas 99.2 2.1E-11 4.6E-16 128.2 5.7 247 291-570 262-515 (524)
456 cd05154 ACAD10_11_like Acyl-Co 99.2 3.6E-10 7.7E-15 109.9 13.9 142 300-446 4-205 (223)
457 cd05146 RIO3_euk RIO kinase fa 99.2 6E-10 1.3E-14 104.6 14.4 137 300-449 3-175 (197)
458 PF14580 LRR_9: Leucine-rich r 99.2 1.4E-11 3E-16 113.3 2.7 117 77-200 20-144 (175)
459 COG3642 Mn2+-dependent serine/ 99.1 2E-09 4.4E-14 97.4 12.8 132 300-447 2-140 (204)
460 KOG3087 Serine/threonine prote 99.0 1.6E-09 3.5E-14 97.5 10.2 144 298-447 11-165 (229)
461 PF14580 LRR_9: Leucine-rich r 99.0 6E-11 1.3E-15 109.1 1.1 115 83-205 4-125 (175)
462 KOG3741 Poly(A) ribonuclease s 99.0 1.3E-08 2.9E-13 105.0 16.5 220 306-572 288-524 (655)
463 KOG0532 Leucine-rich repeat (L 98.9 9.5E-11 2.1E-15 121.3 -1.4 125 75-206 120-247 (722)
464 PF13855 LRR_8: Leucine rich r 98.9 4.9E-10 1.1E-14 84.8 2.6 57 102-158 3-59 (61)
465 PRK15387 E3 ubiquitin-protein 98.9 9.8E-10 2.1E-14 122.9 5.8 115 77-208 343-460 (788)
466 PRK15370 E3 ubiquitin-protein 98.9 1.8E-09 4E-14 121.3 7.8 95 101-205 263-358 (754)
467 KOG1259 Nischarin, modulator o 98.9 1.2E-10 2.5E-15 111.5 -1.8 127 76-209 284-415 (490)
468 KOG0606 Microtubule-associated 98.9 3.5E-10 7.7E-15 125.0 1.2 250 292-565 802-1085(1205)
469 PRK15370 E3 ubiquitin-protein 98.9 2.2E-09 4.8E-14 120.7 6.9 117 76-205 199-316 (754)
470 PF13855 LRR_8: Leucine rich r 98.9 1.9E-09 4.1E-14 81.5 4.1 61 76-136 1-61 (61)
471 COG4248 Uncharacterized protei 98.9 1.3E-07 2.8E-12 95.4 18.1 289 297-605 14-327 (637)
472 PRK15123 lipopolysaccharide co 98.9 2.6E-08 5.6E-13 98.9 13.2 141 300-446 28-193 (268)
473 PF01163 RIO1: RIO1 family; I 98.9 3.3E-08 7.1E-13 92.5 12.6 126 309-448 1-156 (188)
474 PRK15387 E3 ubiquitin-protein 98.8 6.4E-09 1.4E-13 116.4 7.9 112 77-205 223-334 (788)
475 KOG0618 Serine/threonine phosp 98.8 4.3E-10 9.3E-15 122.6 -1.5 121 75-199 382-503 (1081)
476 KOG0532 Leucine-rich repeat (L 98.8 3.2E-10 7E-15 117.4 -3.1 124 77-206 99-224 (722)
477 KOG4579 Leucine-rich repeat (L 98.8 2E-10 4.4E-15 97.7 -4.6 134 71-209 22-162 (177)
478 PLN03210 Resistant to P. syrin 98.7 1.7E-08 3.6E-13 121.0 8.7 126 77-205 612-737 (1153)
479 COG0478 RIO-like serine/threon 98.7 9.8E-08 2.1E-12 91.8 12.1 136 296-447 93-251 (304)
480 PF08263 LRRNT_2: Leucine rich 98.7 9.8E-09 2.1E-13 71.2 3.9 40 34-73 2-43 (43)
481 KOG1259 Nischarin, modulator o 98.7 2.3E-09 5E-14 102.8 -0.8 108 76-190 307-416 (490)
482 KOG1859 Leucine-rich repeat pr 98.7 6.8E-10 1.5E-14 117.8 -5.5 125 77-208 165-294 (1096)
483 cd00116 LRR_RI Leucine-rich re 98.6 2E-09 4.2E-14 111.0 -3.1 131 75-205 80-233 (319)
484 PLN03210 Resistant to P. syrin 98.6 7.9E-08 1.7E-12 115.3 8.9 125 77-205 590-716 (1153)
485 COG4886 Leucine-rich repeat (L 98.6 1.7E-08 3.6E-13 107.4 2.4 128 75-207 115-246 (394)
486 cd00116 LRR_RI Leucine-rich re 98.6 3.9E-09 8.4E-14 108.8 -3.0 130 76-205 51-205 (319)
487 KOG4579 Leucine-rich repeat (L 98.6 9.5E-09 2.1E-13 87.7 -0.3 114 76-193 53-167 (177)
488 COG4886 Leucine-rich repeat (L 98.6 3E-08 6.5E-13 105.5 3.4 120 80-204 97-220 (394)
489 KOG2137 Protein kinase [Signal 98.6 1.8E-08 3.8E-13 107.9 1.4 150 402-568 106-264 (700)
490 PF06293 Kdo: Lipopolysacchari 98.5 5.8E-07 1.3E-11 86.3 10.6 124 317-447 31-170 (206)
491 PRK09902 hypothetical protein; 98.4 4.2E-06 9.1E-11 78.9 13.5 138 302-446 26-178 (216)
492 COG0661 AarF Predicted unusual 98.4 1.1E-06 2.4E-11 94.5 10.3 142 300-450 131-317 (517)
493 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 6.9E-06 1.5E-10 79.9 13.3 138 300-446 7-181 (226)
494 KOG3207 Beta-tubulin folding c 98.3 1.5E-07 3.3E-12 95.2 1.6 110 75-185 196-314 (505)
495 KOG0531 Protein phosphatase 1, 98.3 3.4E-07 7.4E-12 97.8 2.4 127 76-209 95-224 (414)
496 KOG0531 Protein phosphatase 1, 98.2 3.6E-07 7.8E-12 97.7 1.3 128 76-209 72-202 (414)
497 KOG3207 Beta-tubulin folding c 98.2 3.4E-07 7.4E-12 92.7 1.0 62 76-137 146-210 (505)
498 PF12799 LRR_4: Leucine Rich r 98.2 1.3E-06 2.8E-11 60.6 3.1 37 100-137 1-37 (44)
499 COG1718 RIO1 Serine/threonine 98.2 2.3E-05 5.1E-10 74.9 12.1 153 285-449 36-217 (268)
500 PF06176 WaaY: Lipopolysacchar 98.2 2.6E-05 5.7E-10 73.8 12.2 138 291-446 28-182 (229)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.1e-60 Score=559.94 Aligned_cols=467 Identities=28% Similarity=0.504 Sum_probs=344.8
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|+.|+|++|++++.+|..+..+++|+.|+|++|++++.+|..+.++++|++|+|++|.++|.+|..|.++++|+.|+|
T Consensus 475 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 554 (968)
T PLN00113 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDL 554 (968)
T ss_pred ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEEC
Confidence 46888899999998888888888999999999999999889988999999999999999999899999999999999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCc--cccccCccccCCCCCCCCCCCC---CCCCCCCCCCCCCCCCcc
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLNCGKTLP---HSCESSSNDSGSSKKPKI 230 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~l~~l~~l~~~~n~~~c~~~~~---~~c~~~~~~~~~~~~~~~ 230 (619)
++|+++|.+|..+..+++|+.|++++|+++|.+|. .+..+....+.||+..|+.+.. .+|... . .....
T Consensus 555 s~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~-----~-~~~~~ 628 (968)
T PLN00113 555 SQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV-----R-KTPSW 628 (968)
T ss_pred CCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc-----c-cccee
Confidence 99999988999888899999999999999988884 3456666778899988876532 233211 1 11122
Q ss_pred eEEE-eeeechhhhhhcceeeeeecccccCccccccccccccchhh-hhcCcccccCHHHHHHHhcCCcccCccccCCCc
Q 007073 231 GIIV-GIVGGLIVLISGGLLFFLCKGRHKGYKREVFVDVAGEVDRR-IAFGQLKRYSWRELQLATDNFSEKNVLGQGGFG 308 (619)
Q Consensus 231 ~~i~-~i~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~el~~~~~~~~~~~~lg~G~fg 308 (619)
.+++ +++++++++++++++++++++|++...+... ...+..... ........+.+++ ....|...++||+|+||
T Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ig~G~~g 704 (968)
T PLN00113 629 WFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVE-NEDGTWELQFFDSKVSKSITIND---ILSSLKEENVISRGKKG 704 (968)
T ss_pred eeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccc-cccccccccccccccchhhhHHH---HHhhCCcccEEccCCCe
Confidence 2222 2222222222222222222222211111110 000000000 0000011222333 33467778899999999
Q ss_pred eEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchhhhhhcccCC
Q 007073 309 KVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP 387 (619)
Q Consensus 309 ~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~ 387 (619)
.||+|.. .+|..||||++..... ....|++++++++|||||+++|+|..++..++||||+++|+|.++++.
T Consensus 705 ~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--- 776 (968)
T PLN00113 705 ASYKGKSIKNGMQFVVKEINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN--- 776 (968)
T ss_pred eEEEEEECCCCcEEEEEEccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---
Confidence 9999997 4789999999864322 123468889999999999999999999999999999999999999964
Q ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeeccccccccc
Q 007073 388 GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIA 467 (619)
Q Consensus 388 ~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~a 467 (619)
++|..+.+++.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||.+...... ....||+.|+|
T Consensus 777 ----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-----~~~~~t~~y~a 846 (968)
T PLN00113 777 ----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-----TKCFISSAYVA 846 (968)
T ss_pred ----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-----CCccccccccC
Confidence 7899999999999999999997777799999999999999999888875 6655432211 12357899999
Q ss_pred cccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC--CCCHHHHHHH
Q 007073 468 PEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK--NYNIQEVETM 545 (619)
Q Consensus 468 PE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~l 545 (619)
||++.+..++.++|||||||++|||+||+.||+.... ......+|............+.++.+.. .....+..++
T Consensus 847 PE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (968)
T PLN00113 847 PETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG---VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEV 923 (968)
T ss_pred cccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC---CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHH
Confidence 9999999999999999999999999999999864322 2234555655544444455555655433 2345667789
Q ss_pred HHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 546 IQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 546 ~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.+++.+||+.||++||||.||++.|++.
T Consensus 924 ~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 924 MNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred HHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 9999999999999999999999999875
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-55 Score=455.52 Aligned_cols=289 Identities=51% Similarity=0.846 Sum_probs=253.7
Q ss_pred cccccCHHHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeee
Q 007073 280 QLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 359 (619)
Q Consensus 280 ~~~~~~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~ 359 (619)
....|+++++..+|++|...++||+|+||.||+|...+|+.||||++....... ..+|.+|++++.+++|||+|+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 467799999999999999999999999999999999999999999887544333 6679999999999999999999999
Q ss_pred eeCCCc-ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 360 CTTPTE-RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 360 ~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
|.+.++ .+||||||++|+|.++|+..... .++|.+|.+||.++|+||+|||+.+.|+||||||||+|||+|+++++|
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999984 99999999999999999985443 789999999999999999999999999999999999999999999999
Q ss_pred EcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 439 VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 439 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
|+|||+|+..........+...||.+|+|||++..+..|+|+|||||||+++|++||+.|.+.... .....+.+|...
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~--~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP--RGELSLVEWAKP 295 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC--cccccHHHHHHH
Confidence 999999975543122222211799999999999999999999999999999999999999886542 223348889888
Q ss_pred Hhhhcccchhcccccc-CCCCH-HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 519 LEREKRLDAIVDRNLN-KNYNI-QEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~-~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
......+.+++|+.+. ..+.. .....+..++.+|++.+|++||+|.||+++|+..
T Consensus 296 ~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred HHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 8888899999999987 55554 6888899999999999999999999999999653
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-49 Score=402.30 Aligned_cols=255 Identities=33% Similarity=0.504 Sum_probs=211.1
Q ss_pred CcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC-cceeEeccc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-ERLLVYPFM 373 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~e~~ 373 (619)
+...+.||+|+||+||+|.+.....||||++.... .....++|.+|+.++.+++|||||+++|+|.++. ..++|||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 33445699999999999999744449999997543 2222679999999999999999999999999988 799999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCcEEeCCCC-cEEEcccccceeeccC
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK-IIHRDVKAANVLLDEDF-EAVVGDFGLAKLVDVR 451 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~~~ 451 (619)
++|+|.++++.. ....+++..+.+++.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++.....
T Consensus 123 ~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 123 PGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 999999999875 345699999999999999999999999 7 99999999999999997 9999999999876543
Q ss_pred Ccceeeecccccccccccccc--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLS--TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
. ...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||..... .+... .+.
T Consensus 198 ~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--------~~~~~---------~v~ 259 (362)
T KOG0192|consen 198 K-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--------VQVAS---------AVV 259 (362)
T ss_pred c-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--------HHHHH---------HHH
Confidence 2 2333467999999999999 66899999999999999999999999975332 01111 122
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....+...+......+..++.+||+.||+.||++.+++..|+..
T Consensus 260 ~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 260 VGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred hcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 22223333444667899999999999999999999999999864
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-49 Score=399.34 Aligned_cols=259 Identities=30% Similarity=0.446 Sum_probs=220.8
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
+...+.+...+.||+|.||.||.|.++....||+|.++.. ....++|.+|+++|++++|+|||+++|+|..++..+||
T Consensus 202 ei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIV 279 (468)
T KOG0197|consen 202 EIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIV 279 (468)
T ss_pred eecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc--ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEE
Confidence 3444445567889999999999999987779999999754 33467899999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
||||+.|+|.++|+. .++..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+...
T Consensus 280 tE~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred EEecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccC
Confidence 999999999999997 3456689999999999999999999999 99999999999999999999999999999665
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
.+.........-...|.|||.+..+.++.|||||||||+||||+| |+.|+... ...+.+..+.+..++.
T Consensus 355 d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m--------sn~ev~~~le~GyRlp-- 424 (468)
T KOG0197|consen 355 DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM--------SNEEVLELLERGYRLP-- 424 (468)
T ss_pred CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC--------CHHHHHHHHhccCcCC--
Confidence 544444444445779999999999999999999999999999999 77776532 2334455555555553
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.+..++..++++|..||+.+|++||||+.+...|++.
T Consensus 425 --------~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 425 --------RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred --------CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 2455678899999999999999999999999988874
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-47 Score=369.83 Aligned_cols=250 Identities=25% Similarity=0.370 Sum_probs=210.2
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc-ceeEeccc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE-RLLVYPFM 373 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~lv~e~~ 373 (619)
++..+.||+|..|+||++.++ +++.+|+|.++....+...++..+|++++++.+||+||.++|.|..+.. ..++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 344678999999999999986 6889999999766666778899999999999999999999999999884 99999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
.+|+|+..+... ..+++....+|+.++.+||.|||+ + +||||||||+|||++..|++||+|||.++.+...
T Consensus 161 DgGSLd~~~k~~----g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 161 DGGSLDDILKRV----GRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred CCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 999999999875 338999999999999999999996 6 9999999999999999999999999999876543
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
....++||..|||||.+++..|+.++||||||+.++|+.+|+.|+......... ..+. +..+++..
T Consensus 233 --~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~---~~~L---------l~~Iv~~p 298 (364)
T KOG0581|consen 233 --IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD---IFEL---------LCAIVDEP 298 (364)
T ss_pred --hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC---HHHH---------HHHHhcCC
Confidence 445678999999999999999999999999999999999999999764221111 1111 12233321
Q ss_pred ccCCCCH-HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNI-QEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. +..+. .++.++.+++..|+++||.+||++.|+++
T Consensus 299 p-P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 299 P-PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred C-CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 11222 36678999999999999999999999984
No 6
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4e-47 Score=405.55 Aligned_cols=263 Identities=26% Similarity=0.419 Sum_probs=219.6
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
+....+....+.||+|+||.||+|+.. +...||||.+++..+.+...+|++|+++++.++|||||+|+|+|.++
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~ 561 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG 561 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence 344555666789999999999999852 35679999999888777899999999999999999999999999999
Q ss_pred CcceeEecccccchhhhhhcccCCC----------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPG----------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE 433 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 433 (619)
+..++|+|||..|||..+|+...+. ..+++..+.+.||.|||.||+||-++ .+|||||.++|+||.+
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGE 638 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceecc
Confidence 9999999999999999999754322 23388899999999999999999999 9999999999999999
Q ss_pred CCcEEEcccccceeeccCCcceee-eccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchh
Q 007073 434 DFEAVVGDFGLAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVL 511 (619)
Q Consensus 434 ~~~~kl~DfGla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~ 511 (619)
+..|||+|||+++..-..+.+... ...-..+|||||.+..++||++||||||||++||++| |+.||....-
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn------- 711 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN------- 711 (774)
T ss_pred ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch-------
Confidence 999999999999976544444332 3334679999999999999999999999999999999 8888864321
Q ss_pred HHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 512 LLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+-+....+.+++ -..+..++.++++||..||+.+|++||+++||-..|++.
T Consensus 712 --~EVIe~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 712 --QEVIECIRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred --HHHHHHHHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 111222222222 224566778999999999999999999999999999874
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-45 Score=362.74 Aligned_cols=202 Identities=24% Similarity=0.403 Sum_probs=181.4
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..+|...+.||+|+||+||+|+++ ++..||||.+.... .+...+.+..|+.+++.++|||||++++++..++..++||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 356888888999999999999975 68999999987543 4556677889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC------CcEEEccccc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED------FEAVVGDFGL 444 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------~~~kl~DfGl 444 (619)
|||.+|+|.++++... .++..+.+.++.|+|.||++||++ +||||||||+|||++.. ..+||+|||+
T Consensus 89 EyC~gGDLs~yi~~~~----~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG----RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 9999999999999754 389999999999999999999999 99999999999999865 5689999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCc
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSR 503 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~ 503 (619)
|+.+... ......+|++.|||||+++..+|+.|+|+||+|+++|+|++|+.||+...
T Consensus 162 AR~L~~~--~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 162 ARFLQPG--SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhhCCch--hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 9988633 33456789999999999999999999999999999999999999997543
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-46 Score=347.81 Aligned_cols=261 Identities=21% Similarity=0.324 Sum_probs=213.3
Q ss_pred cCCcccCccccCCCceEEEEE-eCCCcEEEEEEeccC-CCcchHHHHHHHHHHHHHccCCCccceee-eeeCCCc-ceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDF-ESPGGDAAFQREVEMISVAVHRNLLRLIG-FCTTPTE-RLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~-~~~g~~vAvK~l~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~~-~~lv 369 (619)
.+|.+.++||+|.||+||++. ..+|..||.|.++-. -+....++...|+.+|++++|||||++++ .+.++.+ ..+|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 456778899999999999999 468999999998722 23445677889999999999999999998 4444555 7899
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
|||+..|+|...++..+.+...++..++++++.|+++||.++|.+...+ |+||||||.||+++.+|.|||+|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999999999999888899999999999999999999999954322 889999999999999999999999999988
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
....+ .....+|||.||+||.+....|+.||||||+||++|||+.-..||... .+.+...++... ..
T Consensus 179 ~s~~t-fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--------n~~~L~~KI~qg-d~--- 245 (375)
T KOG0591|consen 179 SSKTT-FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--------NLLSLCKKIEQG-DY--- 245 (375)
T ss_pred cchhH-HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--------cHHHHHHHHHcC-CC---
Confidence 65443 344578999999999999999999999999999999999999999643 233333333222 11
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.+-....++.++..|+..|+..||+.||+.-.+++.+..
T Consensus 246 -----~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 -----PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -----CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 111125667899999999999999999985444444443
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-44 Score=372.58 Aligned_cols=248 Identities=24% Similarity=0.394 Sum_probs=211.7
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccC--CCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..|...++||+|||+.||+++. ..|..||+|++.+. ......+...+|+++.+.++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688899999999999999997 78999999999653 24556778899999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
|+|.+++|..+++.. .++++++++.+..||+.||.|||++ +|+|||||-.|++++++.++||+|||+|..+..
T Consensus 98 ELC~~~sL~el~Krr----k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR----KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHHhc----CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 999999999988743 4499999999999999999999999 999999999999999999999999999998865
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
+.. .....+|||.|+|||++....++..+||||+||++|-|++|++||...... +.+..+....-
T Consensus 171 ~~E-rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk--------ety~~Ik~~~Y------ 235 (592)
T KOG0575|consen 171 DGE-RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK--------ETYNKIKLNEY------ 235 (592)
T ss_pred ccc-ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH--------HHHHHHHhcCc------
Confidence 433 344568999999999999999999999999999999999999999743221 22222211110
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+...+.+..+|+.++++.||.+|||+++|+.
T Consensus 236 -----~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 236 -----SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred -----ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 112344467889999999999999999999983
No 10
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-45 Score=358.34 Aligned_cols=255 Identities=25% Similarity=0.363 Sum_probs=204.2
Q ss_pred HhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcc------hHHHHHHHHHHHHHccCCCccceeeeeeCCC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPG------GDAAFQREVEMISVAVHRNLLRLIGFCTTPT 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 364 (619)
..+.|.+.+.||+|+||.|-+|.. ++|+.||||.+++..... ......+|+++|++++|||||++++++..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 345678889999999999999995 589999999997543222 2234569999999999999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEEcc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED---FEAVVGD 441 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~D 441 (619)
..|+|||||+||+|.+.+-... .+....-+.++.|++.|+.|||+. ||+||||||+|||+..+ ..+||+|
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk----~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK----YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc----ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecc
Confidence 9999999999999999987533 366677788999999999999999 99999999999999766 7899999
Q ss_pred cccceeeccCCcceeeeccccccccccccccCCCC---CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKS---SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
||+|+..+ ....+...+||+.|.|||++.+..+ ..++|+||+||++|-+++|.+||....- +..+.+.+.+
T Consensus 323 FGlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~----~~sl~eQI~~ 396 (475)
T KOG0615|consen 323 FGLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT----DPSLKEQILK 396 (475)
T ss_pred cchhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC----CccHHHHHhc
Confidence 99999876 3455667899999999999976543 4588999999999999999999974321 1111111111
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
++... -+.......++..+++.+|+..||++|||+.|+++.
T Consensus 397 ----G~y~f------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 397 ----GRYAF------GPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred ----Ccccc------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 11100 011234556788999999999999999999999853
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.2e-44 Score=341.48 Aligned_cols=263 Identities=22% Similarity=0.318 Sum_probs=207.2
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
+.|+...++|+|+||+||+++.+ +|+.||||++.+... +.-.+-.++|++++++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45777889999999999999976 599999999987654 3344567799999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|++. ++.+.|+.+..+ ++.....+++.|+++|+.|+|++ ++|||||||+|||++.++.+||+|||+|+.+..
T Consensus 82 ~~dh-TvL~eLe~~p~G---~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~- 153 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNG---VPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA- 153 (396)
T ss_pred ecch-HHHHHHHhccCC---CCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-
Confidence 9987 454555554443 78889999999999999999999 999999999999999999999999999998864
Q ss_pred CcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh-hcccchhc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER-EKRLDAIV 529 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 529 (619)
.....+.++.|..|.|||.+.+ .+|+..+||||+||++.||+||.+-|...+.- ..+......+.. ..+-..++
T Consensus 154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi----DQLy~I~ktLG~L~prhq~iF 229 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI----DQLYLIRKTLGNLIPRHQSIF 229 (396)
T ss_pred CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH----HHHHHHHHHHcccCHHHHHHh
Confidence 4455677789999999999987 78999999999999999999999988754321 111111111100 00111111
Q ss_pred ccc---------------ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRN---------------LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~---------------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+ ......+....-+.+++..|++.||++|++.++++.
T Consensus 230 ~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 230 SSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111 011112344457899999999999999999999874
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-44 Score=349.99 Aligned_cols=259 Identities=24% Similarity=0.257 Sum_probs=210.3
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..++|++.++||+|+||.||.++.+ +++.+|+|++++.. .....+....|..++.+++||.||+++-.+++++..++
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 4578999999999999999999965 68999999997643 23346778899999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
|+||+.||.|..+|+.. ..+++...+-++..|+.||.|||++ +||||||||+|||+|.+|+++|+|||+++..
T Consensus 103 Vld~~~GGeLf~hL~~e----g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQRE----GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EEeccCCccHHHHHHhc----CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 99999999999999863 3488898999999999999999999 9999999999999999999999999999854
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
- .....+...+||+.|||||++.+..|+..+|+||+|+++|||+||.+||..... ..+...+....
T Consensus 176 ~-~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~--------~~~~~~I~~~k----- 241 (357)
T KOG0598|consen 176 L-KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV--------KKMYDKILKGK----- 241 (357)
T ss_pred c-cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH--------HHHHHHHhcCc-----
Confidence 2 233345557899999999999999999999999999999999999999975331 22333332222
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcc
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLA 576 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 576 (619)
....+.-...+..+++...++.||++|-....=...++...+.
T Consensus 242 -----~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF 284 (357)
T KOG0598|consen 242 -----LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFF 284 (357)
T ss_pred -----CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccc
Confidence 0111222346788999999999999996422222335555443
No 13
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-45 Score=384.40 Aligned_cols=256 Identities=27% Similarity=0.414 Sum_probs=220.4
Q ss_pred cCCcccCccccCCCceEEEEEeCC----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
....+.++||.|.||.||+|.++- ...||||.++...+..+..+|+.|+.+|.+++||||++|.|+........+|
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 345677899999999999999752 3579999999888888899999999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
.|||+||+|+.+|+... .++++.+...++++||.||.||.+. ++|||||.++|||++.+..+|++|||+++.+.
T Consensus 709 TEyMENGsLDsFLR~~D---GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQND---GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred hhhhhCCcHHHHHhhcC---CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecc
Confidence 99999999999999754 3488999999999999999999999 99999999999999999999999999999886
Q ss_pred cCCcceeeeccc--cccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 450 VRKTNVTTQVRG--TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 450 ~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
++.....+...| ..+|.|||.+..+++|.+|||||||++|||.++ |.+||-..+. .+.++.++...++
T Consensus 783 dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--------QdVIkaIe~gyRL- 853 (996)
T KOG0196|consen 783 DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------QDVIKAIEQGYRL- 853 (996)
T ss_pred cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch--------HHHHHHHHhccCC-
Confidence 655444443333 468999999999999999999999999999888 8999753221 1233444444444
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..+.+++..+++||..||++|-.+||+|.+|+..|.++
T Consensus 854 ---------PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 854 ---------PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred ---------CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 34667788999999999999999999999999999985
No 14
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=362.96 Aligned_cols=264 Identities=28% Similarity=0.461 Sum_probs=213.2
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
+++++..+.+.+.+.||+|.||+||+|.|. -.||||++.... +++..+.|..|+.++++-+|.||+-++|+|..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 667777788888999999999999999985 469999997433 45577899999999999999999999999999887
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.+|..+|+|-+|+.+++... ..++..+...||+|||+||.|||.+ +|||||||..||++.+++.|||+|||++
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred -eeeehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccce
Confidence 99999999999999999744 4589999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCC-cceeeeccccccccccccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 446 KLVDVRK-TNVTTQVRGTMGHIAPEYLST---GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 446 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
..-..-. ........|...|||||++.. .+|++.+||||||+|+|||+||..||.....+ ..+. ...+
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d----qIif----mVGr 607 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD----QIIF----MVGR 607 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh----heEE----Eecc
Confidence 7543221 112233457889999999964 46899999999999999999999999732211 1110 1111
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
++.+.+.. .....++.++.+|+..||+.++++||.+.+|+..|+.+
T Consensus 608 G~l~pd~s------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l 653 (678)
T KOG0193|consen 608 GYLMPDLS------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL 653 (678)
T ss_pred cccCccch------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence 11111111 11345567899999999999999999999999988764
No 15
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-43 Score=386.60 Aligned_cols=263 Identities=29% Similarity=0.443 Sum_probs=216.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeC--CCc----EEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA--DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~--~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
..++.+..+.||+|+||.||+|... +|. .||||.+++..+.+...+|.+|..+|+.++|||||+++|+|.....
T Consensus 690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 3455666789999999999999975 343 4999999988888889999999999999999999999999999999
Q ss_pred ceeEecccccchhhhhhcccCCC---CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPG---EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
.++++|||++|+|..+|++.... ...++......++.|||+|+.||+++ ++|||||.++|+|++....|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999985332 34588999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeec-cccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHh
Q 007073 443 GLAKLVDVRKTNVTTQV-RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
|+|+.+...+....... .-..+|||||.+..+.+|.|+|||||||++||++| |..||..... . +......
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-----~---~v~~~~~ 918 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-----F---EVLLDVL 918 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-----H---HHHHHHH
Confidence 99995543333322222 33568999999999999999999999999999999 7888753221 1 1111122
Q ss_pred hhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc
Q 007073 521 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGL 575 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 575 (619)
..+++ ..+..++..++++|..||+.+|++||++..++++++....
T Consensus 919 ~ggRL----------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 919 EGGRL----------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred hCCcc----------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 22222 2245566789999999999999999999999998887643
No 16
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.9e-42 Score=358.15 Aligned_cols=264 Identities=26% Similarity=0.419 Sum_probs=206.6
Q ss_pred HHHhcCCcccCccccCCCceEEEEEe------CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeC
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT 362 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 362 (619)
++..++|.+.+.||+|+||.||+|.+ .+++.||||+++..........+.+|+.++.++ +||||+++++++..
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 34567899999999999999999974 235789999997544444567799999999999 89999999998876
Q ss_pred CC-cceeEecccccchhhhhhcccCCC-----------------------------------------------------
Q 007073 363 PT-ERLLVYPFMQNLSVAYRLREIKPG----------------------------------------------------- 388 (619)
Q Consensus 363 ~~-~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------------- 388 (619)
.+ ..++||||+++|+|.+++......
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 54 578999999999999988653210
Q ss_pred -----CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc-eeeecccc
Q 007073 389 -----EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGT 462 (619)
Q Consensus 389 -----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt 462 (619)
...+++.....++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++........ ......++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 13477888899999999999999999 9999999999999999999999999999865432221 12233466
Q ss_pred ccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHH
Q 007073 463 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQE 541 (619)
Q Consensus 463 ~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 541 (619)
..|+|||.+.+..++.++|||||||++|||+| |..||....... .. ......... ...+...
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~----~~---~~~~~~~~~----------~~~~~~~ 302 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE----EF---CQRLKDGTR----------MRAPENA 302 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH----HH---HHHHhcCCC----------CCCCCCC
Confidence 78999999999999999999999999999997 999986432211 11 111111110 0112223
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 542 VETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 542 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 303 ~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 303 TPEIYRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 45789999999999999999999999999863
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-42 Score=342.35 Aligned_cols=254 Identities=26% Similarity=0.408 Sum_probs=203.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC--cceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT--ERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ 370 (619)
.++...+.||+|+||+||++... +|...|||.+....... .+.+.+|+.++++++|||||+.+|.....+ ...+.|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 34666889999999999999975 48999999886443222 677899999999999999999999865555 588999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-CCcEEEcccccceeec
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-DFEAVVGDFGLAKLVD 449 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~ 449 (619)
||+++|+|.+++..... .++...+..++.||++||+|||++ +||||||||+|||++. ++.+||+|||+++...
T Consensus 96 Ey~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 99999999999987542 499999999999999999999999 9999999999999999 7999999999998776
Q ss_pred c--CCcceeeeccccccccccccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 450 V--RKTNVTTQVRGTMGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 450 ~--~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
. ..........||+.|||||++..+. ...++||||+||++.||+||+.||... . ....+.-......
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~------~~~~~~~~ig~~~--- 239 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-F------EEAEALLLIGRED--- 239 (313)
T ss_pred cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-c------chHHHHHHHhccC---
Confidence 3 2222344578999999999998643 345999999999999999999999642 0 0111111111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 570 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 570 (619)
..+..+...+.+..+++..|++.+|++|||++++++..
T Consensus 240 ------~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 240 ------SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred ------CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 11133444556889999999999999999999999654
No 18
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-42 Score=350.26 Aligned_cols=264 Identities=27% Similarity=0.385 Sum_probs=225.9
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEeCC-CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
++++....+..+.++||.|.||.||.|.|+. .-.||||.+++. ....++|+.|..+|+.++|||+|+|+|+|..+..
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED--tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc--chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 6777777888899999999999999999974 567999999864 3457899999999999999999999999999999
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.|+|.|||.+|+|.++|++... ..++-...+.++.||+.||+||..+ ++|||||.++|+|+.++..|||+|||++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLs 412 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLS 412 (1157)
T ss_pred eEEEEecccCccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchh
Confidence 9999999999999999998654 3366777889999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
+++..+.........-.+.|.|||.+....++.|+|||+|||++||+.| |..||.. ..+.+.+.-++...+
T Consensus 413 RlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG--------idlSqVY~LLEkgyR 484 (1157)
T KOG4278|consen 413 RLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYGLLEKGYR 484 (1157)
T ss_pred hhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC--------ccHHHHHHHHhcccc
Confidence 9987655444444445778999999999999999999999999999999 7777753 234444444444444
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGL 575 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 575 (619)
+ ..+..+++.+++||+.||+++|.+||++.|+-+.++.+-.
T Consensus 485 M----------~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 485 M----------DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred c----------cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 3 3356677899999999999999999999999999987643
No 19
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-43 Score=352.78 Aligned_cols=247 Identities=24% Similarity=0.398 Sum_probs=203.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
..+.....+-||+|+.|.||+|+++ ++.||||++++.. ..+++-|++++|+||+.+.|+|.....+++|||
T Consensus 122 PFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk--------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiME 192 (904)
T KOG4721|consen 122 PFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK--------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIME 192 (904)
T ss_pred CHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhh--------hhhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence 3333444677999999999999995 7899999886422 356778999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
||..|-|...|+.. ..+.-.....+..+||.||.|||.+ .|||||||.-||||+.+..|||+|||.++.....
T Consensus 193 fCa~GqL~~VLka~----~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 193 FCAQGQLYEVLKAG----RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred ccccccHHHHHhcc----CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 99999999999863 3477778889999999999999999 9999999999999999999999999999876543
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
...-.++||..|||||++.+.+.++|+||||||||||||+||..||..-... ..+-.+-..
T Consensus 266 --STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-----------------AIIwGVGsN 326 (904)
T KOG4721|consen 266 --STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-----------------AIIWGVGSN 326 (904)
T ss_pred --hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-----------------eeEEeccCC
Confidence 2233567999999999999999999999999999999999999998532110 001111111
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.+.-..+..++..+.-|+++||+..|..||+|.+++..|+-.
T Consensus 327 sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 327 SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 222234556667888999999999999999999999999764
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-41 Score=332.42 Aligned_cols=268 Identities=24% Similarity=0.360 Sum_probs=212.4
Q ss_pred HHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
...+.|++.++||.|..++||+|.. ..+..||||++.-.......+.+.+|+..++.++||||++++..|..+.+.++|
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 3557899999999999999999995 468999999997544445578899999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|.||.+|++.+.+....+.+ +++..+..|.+++.+||.|||.+ |.||||||+.||||+.+|.|||+|||.+..+.
T Consensus 103 mpfMa~GS~ldIik~~~~~G--l~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDG--LEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred ehhhcCCcHHHHHHHHcccc--ccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 99999999999999876655 89999999999999999999999 99999999999999999999999999876664
Q ss_pred cCCcce---eeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 450 VRKTNV---TTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 450 ~~~~~~---~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
...... ....+||+.|||||+++. ..|+.|+||||||++..||.+|..||...... .+.+ ..+. +.
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm---kvLl----~tLq--n~ 248 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM---KVLL----LTLQ--ND 248 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH---HHHH----HHhc--CC
Confidence 332221 145679999999999543 45899999999999999999999999643211 0111 1111 01
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHhc
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR--MLEG 572 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~ 572 (619)
.....-..+...........+.+++..|++.||.+|||++++++ +++.
T Consensus 249 pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~ 298 (516)
T KOG0582|consen 249 PPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKK 298 (516)
T ss_pred CCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhh
Confidence 10000111111122344458899999999999999999999983 4443
No 21
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-42 Score=358.18 Aligned_cols=265 Identities=28% Similarity=0.396 Sum_probs=215.0
Q ss_pred HHHHHHHhcCCcccCccccCCCceEEEEEeCC--C--cE-EEEEEecc--CCCcchHHHHHHHHHHHHHccCCCccceee
Q 007073 286 WRELQLATDNFSEKNVLGQGGFGKVYRGVLAD--G--TK-VAVKRLTD--FESPGGDAAFQREVEMISVAVHRNLLRLIG 358 (619)
Q Consensus 286 ~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~--g--~~-vAvK~l~~--~~~~~~~~~~~~E~~~l~~l~H~niv~l~~ 358 (619)
...++...++....++||+|+||.||+|.++. + .. ||||..+. ........+|.+|++++++++|||||+++|
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 34556667777778999999999999999652 2 23 89999874 345667889999999999999999999999
Q ss_pred eeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 359 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 359 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
++...+..++|||+|+||+|.++|+.... .++..++..++.++|+||+|||++ +++||||.++|+|++.++.+|
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEE
Confidence 99999999999999999999999998553 489999999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHH
Q 007073 439 VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 439 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
|+|||+++.-...... .....-...|+|||.+..+.|++++|||||||++||+++ |..||...... +...
T Consensus 303 ISDFGLs~~~~~~~~~-~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--------~v~~ 373 (474)
T KOG0194|consen 303 ISDFGLSRAGSQYVMK-KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--------EVKA 373 (474)
T ss_pred eCccccccCCcceeec-cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--------HHHH
Confidence 9999998754311111 111234679999999999999999999999999999999 88888643321 1112
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
.... ...+...+...+..+..++.+||..+|++||+|.++.+.|+...
T Consensus 374 kI~~---------~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~ 421 (474)
T KOG0194|consen 374 KIVK---------NGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALE 421 (474)
T ss_pred HHHh---------cCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHH
Confidence 2211 11122223355678889999999999999999999999998753
No 22
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-42 Score=343.01 Aligned_cols=265 Identities=21% Similarity=0.290 Sum_probs=207.4
Q ss_pred HhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCC-ccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPT-ERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~~l 368 (619)
.-++|...+.||.|.||.||+|+. .+|..||||++++.--.-.+..=++|+..|+++. ||||+++.+++.+.+ ..++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 346788899999999999999995 5799999999975432222333468999999999 999999999999888 8999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
|||||+. +|..++++. +..++...++.|+.||.+||+|+|++ |+.|||+||+|||+..+..+||+|||+|+.+
T Consensus 88 VfE~Md~-NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eHHhhhh-hHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 9999976 899988874 56799999999999999999999999 9999999999999999999999999999977
Q ss_pred ccCCcceeeeccccccccccccc-cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh-----
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYL-STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE----- 522 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 522 (619)
.... ..+.++.|..|.|||++ +.+-|+.+.||||+|||++|+.+-++.|.+...-. .+.....-+..+
T Consensus 161 ~Skp--PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D----qi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 161 RSKP--PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID----QIYKICEVLGTPDKDSW 234 (538)
T ss_pred ccCC--CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH----HHHHHHHHhCCCccccc
Confidence 5443 45677889999999977 45779999999999999999999998887543211 111111111000
Q ss_pred ---cccchhcc---cccc----CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 523 ---KRLDAIVD---RNLN----KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 523 ---~~~~~~~~---~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..+...+. +... ....+....+..+++.+|+++||++|||+.|.++.
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00001111 0000 01123466789999999999999999999999863
No 23
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-41 Score=341.46 Aligned_cols=264 Identities=22% Similarity=0.298 Sum_probs=206.2
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC--CcceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 369 (619)
+.|+..++||+|.||.||+|+. .+|+.||+|+++-.. .++...-..+|+.+|++++||||++|.+...+. ...|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 4566678999999999999995 589999999997443 344456667999999999999999999998776 679999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+|||++ +|..++.. .+..++..+++.++.|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+++.
T Consensus 197 FeYMdh-DL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred Eecccc-hhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeecc
Confidence 999987 77777764 334589999999999999999999999 99999999999999999999999999999988
Q ss_pred cCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH---hhhccc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL---EREKRL 525 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 525 (619)
.......+..+-|..|.|||.+.+. .|+.++|+||.|||+.||++|++.+......++ +...++-+ ....+.
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQ----l~kIfklcGSP~e~~W~ 345 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQ----LHKIFKLCGSPTEDYWP 345 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHH----HHHHHHHhCCCChhccc
Confidence 7777667777789999999998874 699999999999999999999998875432111 11111111 111111
Q ss_pred -chhcc-ccc--cCCC-------CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 -DAIVD-RNL--NKNY-------NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 -~~~~~-~~l--~~~~-------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+.. ..+ ...+ -...+...++|+..++..||++|.|+.++++
T Consensus 346 ~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 346 VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 00000 000 0011 1223356788999999999999999999873
No 24
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-41 Score=340.79 Aligned_cols=258 Identities=22% Similarity=0.333 Sum_probs=210.6
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCc
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 365 (619)
....++|..++.||+|+|++||+|+.. .++.||||++.+.. .....+-...|-.+|.++ .||.|++|+-.|.+...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 345678899999999999999999954 68999999985432 122345566888899998 79999999999999999
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.|+|+||.++|+|.++++.... ++....+.++.+|+.||+|||++ |||||||||+|||+|+|+++||+|||.|
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gs----fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGS----FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCc----chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeecccc
Confidence 9999999999999999998644 88888999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc----------ee--eeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH
Q 007073 446 KLVDVRKTN----------VT--TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 446 ~~~~~~~~~----------~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 513 (619)
+.+...... .. ..++||..|.+||++..+..+..+|+|+|||++|+|+.|++||.... +....
T Consensus 222 K~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N-----eyliF 296 (604)
T KOG0592|consen 222 KILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN-----EYLIF 296 (604)
T ss_pred ccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-----HHHHH
Confidence 988543221 11 34789999999999999999999999999999999999999996432 11121
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCccc
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAE 577 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 577 (619)
+.+..+ .-.+++..++.+.+|+.+.+..||++|+|.++| +...+++
T Consensus 297 qkI~~l--------------~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qI----k~HpFF~ 342 (604)
T KOG0592|consen 297 QKIQAL--------------DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQI----KAHPFFE 342 (604)
T ss_pred HHHHHh--------------cccCCCCCCHHHHHHHHHHHccCccccccHHHH----hhCcccc
Confidence 111111 112344445788999999999999999999555 4444544
No 25
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-41 Score=342.43 Aligned_cols=268 Identities=20% Similarity=0.343 Sum_probs=218.9
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
+.......+.++||+|-||.|..+....+..||||+++.........+|.+|+++|.+++|||||+++|+|..++..++|
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI 613 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI 613 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence 34556677889999999999999999878999999999888777889999999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+|||++|+|..++....... ++.....+|+.|||.||+||.+. ++||||+.++|+|+|.++++||+|||+++.+-
T Consensus 614 ~EYmEnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLY 688 (807)
T ss_pred HHHHhcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccc
Confidence 99999999999998764322 45555677999999999999999 99999999999999999999999999999665
Q ss_pred cCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 450 VRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT--GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 450 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
..+... ....+-..+|||||.+..+++|+++|||+||+++||+++ ...||.... +...++....+...+...
T Consensus 689 sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt-----~e~vven~~~~~~~~~~~ 763 (807)
T KOG1094|consen 689 SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT-----DEQVVENAGEFFRDQGRQ 763 (807)
T ss_pred cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh-----HHHHHHhhhhhcCCCCcc
Confidence 444433 234456789999999999999999999999999999877 566764221 112222222332222222
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.++ ..+.-++..++++|..||..|-++||+++++...|++.
T Consensus 764 ~~l------~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 764 VVL------SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred eec------cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 222 12445567889999999999999999999999988764
No 26
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.8e-41 Score=352.19 Aligned_cols=263 Identities=25% Similarity=0.363 Sum_probs=206.8
Q ss_pred HHHhcCCcccCccccCCCceEEEEEe------CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeC
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT 362 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 362 (619)
....++|++.+.||+|+||.||+|.+ .++..||||+++........+.+.+|+++++.+ +||||+++++++..
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 33456788899999999999999974 246689999997554444567789999999999 89999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCC-------------------------------------------------------
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKP------------------------------------------------------- 387 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 387 (619)
....++||||+++|+|.++++....
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 9999999999999999998864321
Q ss_pred ----------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 388 ----------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 388 ----------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
....+++..+.+++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 112478888999999999999999999 9999999999999999999999999999866433
Q ss_pred Ccce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 452 KTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 452 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.... .....++..|+|||.+.+..++.++|||||||++|||+| |..||...... ........ ....
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~----~~~~~~~~---~~~~----- 335 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD----SKFYKMIK---EGYR----- 335 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch----HHHHHHHH---hCcc-----
Confidence 2211 122335668999999999999999999999999999998 88888643211 11111111 1100
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
...+...+.++.+++.+||+.||++||++.+|++.|+.
T Consensus 336 -----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 336 -----MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 00111123578999999999999999999999999986
No 27
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.6e-40 Score=334.00 Aligned_cols=256 Identities=24% Similarity=0.309 Sum_probs=206.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
.++|++.+.||+|+||.||+|.++ .+..||+|+++...+......|.+|+.++++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 456888999999999999999863 3678999999765544556789999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+...
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE---GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEeCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 999999999999987532 3488999999999999999999999 9999999999999999999999999987654
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
............++..|+|||.+.+..++.++|||||||++||+++ |+.||...... +..........
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~~~--- 226 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--------DVIKAVEDGFR--- 226 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCCC---
Confidence 3222111222335678999999999999999999999999999775 99998643211 11111111100
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
...+...+..+.+++.+||+.+|++||++.+|.+.|++
T Consensus 227 -------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 227 -------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 11122345678999999999999999999999999875
No 28
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.6e-40 Score=339.18 Aligned_cols=266 Identities=21% Similarity=0.333 Sum_probs=204.5
Q ss_pred hcCCcccCccccCCCceEEEEEeCC-----------------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD-----------------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 355 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~-----------------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 355 (619)
.++|.+.+.||+|+||.||+|.+++ +..||+|.+...........|.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578888999999999999998532 33699999876544455678999999999999999999
Q ss_pred eeeeeeCCCcceeEecccccchhhhhhcccCC---------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 007073 356 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP---------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 420 (619)
Q Consensus 356 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iv 420 (619)
+++++...+..++||||+++|+|.+++..... ....+++....+++.|++.||+|||+. +|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 99999999999999999999999998864321 123478888999999999999999999 999
Q ss_pred ecCCCCCcEEeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhC--CC
Q 007073 421 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG--QR 497 (619)
Q Consensus 421 H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg--~~ 497 (619)
||||||+|||++.++.+||+|||+++........ ......++..|+|||.+.++.++.++||||||+++|||+++ ..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999866433221 12233457889999999888999999999999999999975 45
Q ss_pred CCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 498 AIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 498 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
||..... .................. ....++..+..+.+++.+||+.+|++|||+.+|.+.|++
T Consensus 241 p~~~~~~-----~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 241 PYGELTD-----EQVIENAGEFFRDQGRQV------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCcCCH-----HHHHHHHHHHhhhccccc------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 5543211 111111111111110000 001112234678999999999999999999999998863
No 29
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.4e-40 Score=309.09 Aligned_cols=263 Identities=22% Similarity=0.316 Sum_probs=205.6
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|...+.||+|.||.||+|.. ++|+.||||+++-... .+......+|++.++.++|+||+.+++++...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4677789999999999999995 5799999999975433 3345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
||+. +|...+++ ....++-.....++.++.+|++|||++ .|+||||||.|+|++.+|.+||+|||+|+.+...
T Consensus 82 fm~t-dLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9986 88888876 345688889999999999999999999 9999999999999999999999999999998765
Q ss_pred CcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh----cc--
Q 007073 452 KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE----KR-- 524 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~-- 524 (619)
....... +-|..|.|||.+.+ ..|+..+||||.||++.||+-|.+-|...+. ......+-+.... .+
T Consensus 155 ~~~~~~~-V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD-----idQL~~If~~LGTP~~~~WP~ 228 (318)
T KOG0659|consen 155 NRIQTHQ-VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD-----IDQLSKIFRALGTPTPDQWPE 228 (318)
T ss_pred Ccccccc-eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch-----HHHHHHHHHHcCCCCcccCcc
Confidence 5443333 57999999998876 4699999999999999999998876654332 1111111111100 00
Q ss_pred cchhcc-------cc-ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 525 LDAIVD-------RN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 525 ~~~~~~-------~~-l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
+..+.| +. .....-+....+..+++..++..||.+|+|++|++++
T Consensus 229 ~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 229 MTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 000000 00 0011223445677999999999999999999999854
No 30
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=335.64 Aligned_cols=262 Identities=15% Similarity=0.230 Sum_probs=204.9
Q ss_pred CcccccCHHHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcc--hHHHHHHHHHHHHHccCCCccce
Q 007073 279 GQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRL 356 (619)
Q Consensus 279 ~~~~~~~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l 356 (619)
.+++..+.++++. .....||+|++|.||+|.+ +|+.||||+++...... ..+.|.+|+.++++++||||+++
T Consensus 10 ~~~~~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~ 83 (283)
T PHA02988 10 NDIKCIESDDIDK-----YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKI 83 (283)
T ss_pred CcceecCHHHcCC-----CCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3445555555522 2236799999999999998 68999999987543221 24678899999999999999999
Q ss_pred eeeeeC----CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC
Q 007073 357 IGFCTT----PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD 432 (619)
Q Consensus 357 ~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 432 (619)
+|++.. ....++||||+++|+|.+++... ..+++....+++.|++.||.|||+.. +++||||||+||+++
T Consensus 84 ~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~ 157 (283)
T PHA02988 84 YGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE----KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVT 157 (283)
T ss_pred eeeEEecccCCCceEEEEEeCCCCcHHHHHhhC----CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEEC
Confidence 999866 34678999999999999999763 24888999999999999999999732 788999999999999
Q ss_pred CCCcEEEcccccceeeccCCcceeeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch
Q 007073 433 EDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV 510 (619)
Q Consensus 433 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~ 510 (619)
+++.+||+|||+++...... ....|+..|+|||.+.+ ..++.++|||||||++|||+||+.||......
T Consensus 158 ~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~----- 228 (283)
T PHA02988 158 ENYKLKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK----- 228 (283)
T ss_pred CCCcEEEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH-----
Confidence 99999999999998654321 23457899999999976 67999999999999999999999999743211
Q ss_pred hHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 511 LLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+........ ......+...+..+.+++.+||+.||++|||++++++.|+..
T Consensus 229 ---~~~~~i~~~---------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 229 ---EIYDLIINK---------NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred ---HHHHHHHhc---------CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 111111110 011112223456789999999999999999999999999864
No 31
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.6e-40 Score=349.85 Aligned_cols=264 Identities=25% Similarity=0.372 Sum_probs=206.7
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeC
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT 362 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 362 (619)
....++|.+.+.||+|+||.||+|.+. ++..||||+++..........+.+|+++++.+ +|+||+++++++..
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 445568889999999999999999842 34579999997554444566788999999999 89999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCC-------------------------------------------------------
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKP------------------------------------------------------- 387 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 387 (619)
....++||||+++|+|.++++....
T Consensus 114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 9999999999999999998854211
Q ss_pred -----------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc-e
Q 007073 388 -----------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-V 455 (619)
Q Consensus 388 -----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~ 455 (619)
....+++....+++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++........ .
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~ 270 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV 270 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee
Confidence 112478888999999999999999999 9999999999999999999999999999865432221 1
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcccccc
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLN 534 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 534 (619)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||...... ...... .. .. ..
T Consensus 271 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~----~~~~~~---~~-~~---------~~ 333 (374)
T cd05106 271 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN----SKFYKM---VK-RG---------YQ 333 (374)
T ss_pred ccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc----HHHHHH---HH-cc---------cC
Confidence 122335678999999998999999999999999999997 99998643211 011111 10 00 00
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 535 KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 535 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+.++.+++.+||+.||++|||+.+|++.|+++
T Consensus 334 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 334 MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 001111235789999999999999999999999999863
No 32
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=340.51 Aligned_cols=249 Identities=20% Similarity=0.296 Sum_probs=206.9
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
..|...+.||+|+.|.||.|.. .+++.||||++... .....+-..+|+.+|+..+|+|||++++.+...++.+.||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~-~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR-KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEec-cCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 3577778999999999999994 57899999998532 233456677999999999999999999999989999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
|++|+|.+.+.... +++.+...|+..+++||+|||.+ +|+|||||.+|||++.++.+||+|||++..+....
T Consensus 352 m~ggsLTDvVt~~~-----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 352 MEGGSLTDVVTKTR-----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred cCCCchhhhhhccc-----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 99999999887643 88899999999999999999999 99999999999999999999999999998876554
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
. .....+||+.|||||+.....|++|+||||||++++||+-|++||-..... .....+...+.
T Consensus 424 ~-KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl--------rAlyLIa~ng~-------- 486 (550)
T KOG0578|consen 424 S-KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--------RALYLIATNGT-------- 486 (550)
T ss_pred C-ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH--------HHHHHHhhcCC--------
Confidence 4 445567999999999999999999999999999999999999998542210 00011111111
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..-......+..+.+++.+|++.||++||++.|+++
T Consensus 487 P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 487 PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 111224455678999999999999999999999984
No 33
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=340.38 Aligned_cols=266 Identities=22% Similarity=0.364 Sum_probs=221.9
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEeCC---C--cEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeee
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVLAD---G--TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 361 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~---g--~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 361 (619)
++.+...+.....++||+|.||.||+|.+.+ | -.||||..+...+++..+.|++|..+|+.++||||++++|+|.
T Consensus 382 rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~ 461 (974)
T KOG4257|consen 382 RNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV 461 (974)
T ss_pred CcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee
Confidence 3445555666677899999999999999632 3 3589999988777788999999999999999999999999997
Q ss_pred CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcc
Q 007073 362 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGD 441 (619)
Q Consensus 362 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 441 (619)
+. ..++|||.++.|-|..+|+..+. .++..+...++.||+.||+|||++ ++|||||..+|||+.....||++|
T Consensus 462 e~-P~WivmEL~~~GELr~yLq~nk~---sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaD 534 (974)
T KOG4257|consen 462 EQ-PMWIVMELAPLGELREYLQQNKD---SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLAD 534 (974)
T ss_pred cc-ceeEEEecccchhHHHHHHhccc---cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecc
Confidence 54 57899999999999999987543 488889999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHh
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
||+++.+..+.....+...-...|||||.+..+++|.++|||.|||.+||++. |..||..-...
T Consensus 535 FGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs--------------- 599 (974)
T KOG4257|consen 535 FGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS--------------- 599 (974)
T ss_pred cchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc---------------
Confidence 99999998776665555555778999999999999999999999999999988 99999643211
Q ss_pred hhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCccc
Q 007073 521 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAE 577 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 577 (619)
..-..+...-+-..++.+++.++.|+.+||..+|.+||++.++...|.+....+
T Consensus 600 ---DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qee 653 (974)
T KOG4257|consen 600 ---DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEE 653 (974)
T ss_pred ---ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHh
Confidence 111112222223346677889999999999999999999999999998754433
No 34
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.9e-40 Score=332.05 Aligned_cols=250 Identities=27% Similarity=0.472 Sum_probs=196.1
Q ss_pred ccCccccCCCceEEEEEeC-----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 298 EKNVLGQGGFGKVYRGVLA-----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
..+.||.|.||.||+|.+. .+..|+||.++........+.|.+|++.+++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999976 35789999997655555678999999999999999999999999988889999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++|+|.+++... ....+++..+.+|+.|+++||+|||++ +++|+||+++||+++.++.+||+|||++.......
T Consensus 83 ~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 83 CPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp -TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999999875 234489999999999999999999999 99999999999999999999999999998763222
Q ss_pred c-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 453 T-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 453 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
. .......+...|+|||.+.+..++.++||||||+++|||+| |+.|+.... ..+............
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~--------~~~~~~~~~~~~~~~---- 225 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD--------NEEIIEKLKQGQRLP---- 225 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC--------HHHHHHHHHTTEETT----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc--------cccccccccccccce----
Confidence 2 12223446789999999999999999999999999999999 678875321 112222222222211
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 570 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 570 (619)
.+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus 226 ------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 ------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ------eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1122345788999999999999999999999876
No 35
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=337.91 Aligned_cols=250 Identities=24% Similarity=0.330 Sum_probs=205.0
Q ss_pred HHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCC---c-chHHHHHHHHHHHHHcc-CCCccceeeeeeCCC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES---P-GGDAAFQREVEMISVAV-HRNLLRLIGFCTTPT 364 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 364 (619)
...+.|.+.+.||+|+||+|+.|.. .+|..||+|.+.+... . ...+...+|+.++++++ ||||+++++++..+.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3456899999999999999999985 4789999996654211 1 23456668999999999 999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEcccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFG 443 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG 443 (619)
..++||||+.+|+|.+++... ..+......+++.|++.|++|+|++ +|+||||||+|||+|.+ +++||+|||
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~----g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK----GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc----CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 999999999999999999873 2377799999999999999999999 99999999999999999 999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCC-CC-cchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK-SS-ERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
++.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+.... ......+
T Consensus 167 ~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~--------~~l~~ki-- 235 (370)
T KOG0583|consen 167 LSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV--------PNLYRKI-- 235 (370)
T ss_pred cccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH--------HHHHHHH--
Confidence 999774 2333455678999999999999877 75 889999999999999999999975221 1111111
Q ss_pred hcccchhccccccCCCCHHH-HHHHHHHHHhccCCCCCCCCCHHHHH
Q 007073 522 EKRLDAIVDRNLNKNYNIQE-VETMIQVALLCTQASPEDRPAMSEVV 567 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~-~~~l~~l~~~Cl~~dP~~RPs~~evl 567 (619)
....+ .++... +.++.+++.+|+..||.+|+++.+|+
T Consensus 236 -------~~~~~--~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 236 -------RKGEF--KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred -------hcCCc--cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 11110 111112 57889999999999999999999998
No 36
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=330.33 Aligned_cols=254 Identities=24% Similarity=0.349 Sum_probs=212.8
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
...|+..+.||+|.||.||+|.. +.++.||+|++.-.......++.++|+.++.+++++||.+++|.+..+...+++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 34577778999999999999996 46899999999766667778899999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
||.+|++.+.+.... .++.....-++.++..|+.|||.+ +.+|||||+.|||+..++.+|++|||.+..+...
T Consensus 92 y~~gGsv~~lL~~~~----~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN----ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HhcCcchhhhhccCC----CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech
Confidence 999999999997532 245666667888999999999999 9999999999999999999999999999877654
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.... ..++||+.|||||++....|+.|+||||||++.+||.+|.+|+..... .+..-++-+
T Consensus 165 ~~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP------------------mrvlflIpk 225 (467)
T KOG0201|consen 165 VKRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP------------------MRVLFLIPK 225 (467)
T ss_pred hhcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc------------------ceEEEeccC
Confidence 4433 567899999999999988999999999999999999999999864221 122222222
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH--HHHhc
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV--RMLEG 572 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl--~~L~~ 572 (619)
...+....+++..+.+++..|+++||+.||++.+++ ++++.
T Consensus 226 ~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 226 SAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred CCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 223333445667899999999999999999999998 44554
No 37
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.9e-39 Score=329.05 Aligned_cols=258 Identities=24% Similarity=0.432 Sum_probs=207.8
Q ss_pred cCCcccCccccCCCceEEEEEeCC------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
++|++.+.||+|+||.||+|.... ...||+|.+...........|.+|+.++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998642 25799999875554455677899999999999999999999999888999
Q ss_pred eEecccccchhhhhhcccCCC------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 368 LVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
++|||+++|+|.+++...... ...+++.....++.|++.||+|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 999999999999998754221 14578889999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007073 436 EAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 513 (619)
.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||+| |..||......
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-------- 233 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-------- 233 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--------
Confidence 999999999986543222 12233456788999999998899999999999999999998 99998643211
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
+...... ... ....+...+..+.+++.+||+.||++||++.+|++.|++
T Consensus 234 ~~~~~i~-~~~---------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 234 EVIEMIR-SRQ---------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHH-cCC---------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1111111 111 111233445789999999999999999999999999975
No 38
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=310.79 Aligned_cols=239 Identities=23% Similarity=0.288 Sum_probs=203.1
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..++|+..+.||.|+||.|..++.+ +|..+|+|++.+.. ...+.+...+|..+++.+.||+++++++.+.+....++
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence 3456778899999999999999965 68899999996432 23345677889999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||++||-|..+++.... ++....+-+|.+|+.||+|||+. +|++||+||+|||+|.+|.+||+|||+|+.+
T Consensus 122 vmeyv~GGElFS~Lrk~~r----F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRKSGR----FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred EEeccCCccHHHHHHhcCC----CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 9999999999999997543 88999999999999999999999 9999999999999999999999999999987
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
... +...+||+.|+|||+++...+..++|.|||||++|||+.|..||..... .+.+. .+
T Consensus 195 ~~r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~---------KI 253 (355)
T KOG0616|consen 195 SGR----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYE---------KI 253 (355)
T ss_pred cCc----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHH---------HH
Confidence 543 5567899999999999999999999999999999999999999975432 11222 22
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCC
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDR 560 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R 560 (619)
+...+ .++.....++.+|+...++.|-.+|
T Consensus 254 ~~~~v--~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 254 LEGKV--KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HhCcc--cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 22222 2344455688999999999999999
No 39
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.6e-39 Score=325.53 Aligned_cols=256 Identities=25% Similarity=0.374 Sum_probs=207.6
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
..++|++.+.||+|+||.||+|...++..||+|.+... ....+.+.+|+.+++.++|+||+++++++...+..+++||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG--TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 81 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC--chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence 45678899999999999999999888899999987642 2235788999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 82 YMAKGSLLDFLKSDE--GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred cCCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 999999999987542 23478889999999999999999999 9999999999999999999999999999876433
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.........++..|+|||++.+..++.++|||||||++|||+| |+.||..... ... .........
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-----~~~---~~~~~~~~~------ 222 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN-----SDV---MSALQRGYR------ 222 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH-----HHH---HHHHHcCCC------
Confidence 2222223345678999999998899999999999999999999 8999853211 011 111111100
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.......+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 223 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 223 ----MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01111234578899999999999999999999999976
No 40
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.3e-39 Score=323.32 Aligned_cols=257 Identities=26% Similarity=0.369 Sum_probs=208.2
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
...++|++.+.||+|++|.||+|...+++.||+|.++... ...+++.+|+.++++++|+||+++++++...+..++||
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc--ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 3456788899999999999999998888899999986432 23567899999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.... ...+++..+..++.|++.|+.|||++ +++||||||+||++++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 81 ELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred ecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 9999999999987643 34588999999999999999999999 999999999999999999999999999987653
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
..........++..|+|||++.+..++.++||||||+++|||+| |+.||..... .... ........
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~---~~~~~~~~----- 222 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN-----AEVL---QQVDQGYR----- 222 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH-----HHHH---HHHHcCCC-----
Confidence 32222222223457999999999999999999999999999999 9988853211 1111 11111000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.......+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 -----~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 223 -----MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -----CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 01122334678999999999999999999999999975
No 41
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.8e-39 Score=322.92 Aligned_cols=251 Identities=26% Similarity=0.398 Sum_probs=203.3
Q ss_pred cCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
++|++.+.||+|+||.||++.++++..+|+|.+... ......|.+|++++++++||||+++++++...+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG--AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC--CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 467888999999999999999988889999987643 223567899999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++|+|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||.++.......
T Consensus 82 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 82 ENGCLLNYLRQRQ---GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred CCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 9999999887532 2478999999999999999999999 999999999999999999999999999986543322
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.......++..|+|||.+.+..++.++||||||+++|||+| |+.||..... . +........... ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~-----~---~~~~~i~~~~~~---~~-- 222 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN-----Y---EVVEMISRGFRL---YR-- 222 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH-----H---HHHHHHHCCCCC---CC--
Confidence 22223345678999999988889999999999999999999 8888853221 1 111111111110 00
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 570 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 570 (619)
+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 223 -----~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 -----PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 111235789999999999999999999999887
No 42
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=303.49 Aligned_cols=265 Identities=25% Similarity=0.343 Sum_probs=215.1
Q ss_pred HHhcCCcccCccccCCCceEEEEE-eCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC-----C
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----T 364 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~ 364 (619)
+..++|.+.+.+|+|||+-||.++ ..+++-||+|++.- ...++.+..++|++..++++|||+++++++...+ .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c-~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILC-HSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeec-cchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 356789999999999999999999 56889999999853 3356678889999999999999999999887443 3
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
+.+++++|+..|+|.+.++.....+..++..+.+.|+.++++||++||+. .|++.||||||.|||+.+++.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 48999999999999999998887788899999999999999999999998 34599999999999999999999999999
Q ss_pred ceeeccCCcce--------eeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH
Q 007073 445 AKLVDVRKTNV--------TTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 445 a~~~~~~~~~~--------~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 513 (619)
++.....-... ......|..|.|||.+. +...++++|||||||++|+|+.|..||+....
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~--------- 246 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ--------- 246 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---------
Confidence 87653211111 11234689999999985 45679999999999999999999999974322
Q ss_pred HHHHHHhhhcccc-hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 514 DHVKKLEREKRLD-AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 514 ~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.++.+. .+....+..+-....++.+.+++.+|++.||.+||+..+++..++..
T Consensus 247 -------~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 247 -------QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -------cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 111221 22332332222333678999999999999999999999999988763
No 43
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-39 Score=336.22 Aligned_cols=263 Identities=24% Similarity=0.295 Sum_probs=204.9
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|++.+.||+|+||.||++... +|..||+|.+...........+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 468999999999999999999975 6889999998754334455779999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|+|.+++.... .+++.....++.|++.||.|||++. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK----RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 999999999987532 3788899999999999999999852 5999999999999999999999999998765322
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh---h------
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER---E------ 522 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~------ 522 (619)
......|+..|+|||.+.+..++.++|||||||++|||+||+.||....... +......... .
T Consensus 158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 229 (331)
T cd06649 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE-----LEAIFGRPVVDGEEGEPHSI 229 (331)
T ss_pred ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHhcccccccccCCcccc
Confidence 1233468999999999999999999999999999999999999996432210 0000000000 0
Q ss_pred -------------------------cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 523 -------------------------KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 523 -------------------------~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.....+...............++.+++.+||+.||++|||+.++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 230 SPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred CcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000000000112245678999999999999999999999854
No 44
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.5e-40 Score=332.01 Aligned_cols=247 Identities=22% Similarity=0.352 Sum_probs=209.6
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+... ....+.+.+|+++++.++|||||.++++|++..+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46778899999999999999965 688999999865443 3456789999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+.| +|...+.. +..+++..+..++.|++.||.|||+. +|+|||+||.|||++.++.+|++|||+|+.+..
T Consensus 82 ~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST- 152 (808)
T ss_pred hhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-
Confidence 9987 99999876 34489999999999999999999999 999999999999999999999999999998765
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.+...+...||+-|||||...+.+|+..+|.||+||++||+++|++||...+ +.+.++.+. ..
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--------i~~Lv~~I~---------~d 215 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--------ITQLVKSIL---------KD 215 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--------HHHHHHHHh---------cC
Confidence 3455667789999999999999999999999999999999999999995322 222222221 11
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ..+......+..++...+.+||.+|.+-.+++.
T Consensus 216 ~v--~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 216 PV--KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred CC--CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 11 123455678899999999999999999888873
No 45
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.3e-39 Score=328.92 Aligned_cols=252 Identities=24% Similarity=0.348 Sum_probs=200.3
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.|+..+.||+|+||.||+|.. .+|+.||+|.+.... .......+.+|+.++++++|+||+++++++...+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367788999999999999996 479999999886432 22334567899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|+|.+.+.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 81 IMNGGDLKFHIYNMG--NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred ecCCCcHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 999999988876432 23488899999999999999999999 9999999999999999999999999999875332
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
. ......||..|+|||.+.+..++.++|||||||++|||+||+.||........ ......... ..
T Consensus 156 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~----~~~~~~~~~---------~~ 220 (285)
T cd05631 156 E--TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK----REEVDRRVK---------ED 220 (285)
T ss_pred C--eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh----HHHHHHHhh---------cc
Confidence 2 22345689999999999999999999999999999999999999975332110 000001000 00
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPA-----MSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~ 568 (619)
...+....+..+.+++.+||+.||++||+ ++++++
T Consensus 221 --~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 --QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred --cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 01122233467899999999999999997 677664
No 46
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.1e-39 Score=343.00 Aligned_cols=264 Identities=23% Similarity=0.355 Sum_probs=208.2
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeC
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTT 362 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~ 362 (619)
....++|.+.++||+|+||.||+|.+. .+..||||+++........+.+.+|+++++++. ||||+++++++..
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 345678889999999999999999853 234799999976554455678999999999996 9999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCC-------------------------------------------------------
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKP------------------------------------------------------- 387 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 387 (619)
....++||||+++|+|.++++....
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 9999999999999999988864210
Q ss_pred -------------------------------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007073 388 -------------------------------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 430 (619)
Q Consensus 388 -------------------------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 430 (619)
....+++..+.+++.|+++||+|||+. +|+||||||+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence 012477888899999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccccc
Q 007073 431 LDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEED 508 (619)
Q Consensus 431 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~ 508 (619)
++.++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-- 347 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-- 347 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH--
Confidence 999999999999999865432221 1223346788999999998899999999999999999997 889986422110
Q ss_pred chhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 509 DVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.. ........ ....+...+..+.+++.+||+.+|++||++.+|.++|+..
T Consensus 348 --~~---~~~~~~~~----------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 348 --TF---YNKIKSGY----------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred --HH---HHHHhcCC----------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 01 11111110 0111223446789999999999999999999999999863
No 47
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.6e-39 Score=322.67 Aligned_cols=262 Identities=20% Similarity=0.348 Sum_probs=211.7
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||.||+|... +++.||||.+.... .......+.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47888999999999999999964 78999999875422 2334567889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++.........++......++.|++.||+|||++ +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999998876544455688889999999999999999999 999999999999999999999999999987643
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.... .....|+..|+|||.+.+..++.++||||||+++|||+||+.||...... ............
T Consensus 159 ~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~------~~~~~~~~~~~~------- 224 (267)
T cd08228 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LFSLCQKIEQCD------- 224 (267)
T ss_pred hhHH-HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc------HHHHHHHHhcCC-------
Confidence 3221 22345888999999998888999999999999999999999998532211 111111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
.........+..+.+++.+||+.+|++||++.+|++.++.++
T Consensus 225 --~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 225 --YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred --CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 111112344567899999999999999999999999998764
No 48
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.7e-39 Score=326.97 Aligned_cols=261 Identities=24% Similarity=0.398 Sum_probs=205.7
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 364 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 364 (619)
+..++|+..+.||+|+||.||+|.+. ++..||+|++..........+|.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45678999999999999999999853 356799999865443344567899999999999999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCC------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPG------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEE
Confidence 999999999999999998753321 23467888899999999999999998 999999999999999999999
Q ss_pred EcccccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHH
Q 007073 439 VGDFGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 439 l~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 516 (619)
|+|||+++......... .....++..|+|||.+.++.++.++|||||||++|||+| |..||...... ...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--------~~~ 231 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--------QVL 231 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHH
Confidence 99999987654322211 112235778999999998899999999999999999999 68887543211 111
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.... ..... ..+...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 232 ~~~~-~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 232 RFVM-EGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHH-cCCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111 11110 1112234578999999999999999999999998863
No 49
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5.9e-39 Score=322.42 Aligned_cols=257 Identities=27% Similarity=0.397 Sum_probs=207.4
Q ss_pred hcCCcccCccccCCCceEEEEEeCC----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
.++|+..+.||+|+||+||+|.++. ...||||.++..........|.+|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 4578889999999999999999742 457999998765555556789999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++++|.+++.... ..+++..+.+++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++..
T Consensus 83 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 83 ITEYMENGSLDKFLREND---GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEcCCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 999999999999987532 2588999999999999999999999 9999999999999999999999999999877
Q ss_pred ccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 449 DVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 449 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
...... ......++..|+|||.+.+..++.++||||||+++|||++ |..||..... ... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~-----~~~---~~~~~~~~~~- 227 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN-----QDV---IKAVEDGYRL- 227 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH-----HHH---HHHHHcCCCC-
Confidence 522221 2222335678999999998999999999999999999998 9988853211 111 1111111000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..+...+..+.+++.+||+.+|++||++.+|++.|++.
T Consensus 228 ---------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 ---------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11223346789999999999999999999999999763
No 50
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.2e-39 Score=323.01 Aligned_cols=255 Identities=28% Similarity=0.410 Sum_probs=205.9
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
..+|...+.||+|+||.||+|.+. .++.||+|.+... ......+.+|++++++++|+||+++++++......+++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC--chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 345778899999999999999975 5889999988642 3345678999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++.... ...+++..+..++.|+++||+|||++ +++||||||+||++++++.+||+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 83 FMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred eCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 999999999986533 23478999999999999999999999 9999999999999999999999999999876433
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.........++..|+|||.+.+..++.++|||||||++|||+| |..||...... +........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~-------- 221 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLEKG-------- 221 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCC--------
Confidence 2222222334668999999999999999999999999999998 88888642211 111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.....+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 222 --~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 222 --YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 1111222334678999999999999999999999999976
No 51
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.9e-39 Score=325.42 Aligned_cols=259 Identities=25% Similarity=0.417 Sum_probs=207.6
Q ss_pred hcCCcccCccccCCCceEEEEEeCC------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
.++|.+.+.||+|+||.||+|...+ +..||||.+.........+.+.+|+++++.++|+||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3467788999999999999998643 4789999987655444567899999999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCC----------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc
Q 007073 367 LLVYPFMQNLSVAYRLREIKP----------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE 436 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 436 (619)
++||||+++++|.++++.... ....+++.....++.|++.|++|||++ +++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 999999999999999976421 234578889999999999999999999 9999999999999999999
Q ss_pred EEEcccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHH
Q 007073 437 AVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 437 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 514 (619)
+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-----~~~~ 235 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-----EVIE 235 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHH
Confidence 99999999976533221 11223345788999999999999999999999999999999 99998532211 1111
Q ss_pred HHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 515 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
. .. .+.. ...+...+..+.+++.+||+.||++||++.||++.|++
T Consensus 236 ~---~~-~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 236 C---IT-QGRL---------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred H---HH-cCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1 11 1111 11122334678999999999999999999999999863
No 52
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.1e-39 Score=332.13 Aligned_cols=257 Identities=26% Similarity=0.408 Sum_probs=203.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCc----EEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
..+|+..+.||+|+||.||+|.+. +|. .||+|.++........+.+.+|+.+++.++||||++++|++... ...
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 356888999999999999999864 333 48999987544445567899999999999999999999998764 567
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+++||+++|+|.+++.... ..+++.....++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 9999999999999987643 3478888999999999999999999 999999999999999999999999999987
Q ss_pred eccCCccee-eeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 448 VDVRKTNVT-TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 448 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
......... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||+..... +...........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~ 230 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--------EISSILEKGERL 230 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhCCCCC
Confidence 654332221 22234678999999999999999999999999999998 99998642211 111111111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
..+.....++.+++.+||+.+|++||++.+++..+....
T Consensus 231 ----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 231 ----------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred ----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111123357889999999999999999999999988753
No 53
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=6.5e-39 Score=325.87 Aligned_cols=264 Identities=19% Similarity=0.241 Sum_probs=202.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|++.+.||+|+||+||+|..+ +++.||+|++..... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46888999999999999999975 688999999875332 3345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|++++.+...... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEEM----PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 9999877655432 23488889999999999999999999 9999999999999999999999999999876443
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH-----------HHh
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK-----------KLE 520 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-----------~~~ 520 (619)
.........|++.|+|||++.+..++.++|||||||++|||++|+.||....... ....... ...
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID----QLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhhCCCCHHHHHhhh
Confidence 3333334568999999999998899999999999999999999999996432111 0000000 000
Q ss_pred hhcccchhcccccc------CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 521 REKRLDAIVDRNLN------KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 521 ~~~~~~~~~~~~l~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..........+... .......+..+.+++.+|++.||++|||++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000000 0001123457899999999999999999999875
No 54
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.6e-39 Score=325.63 Aligned_cols=263 Identities=23% Similarity=0.309 Sum_probs=199.8
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|...+.||+|+||+||+|... +++.||+|.++..........+.+|++++++++||||+++++++......++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888999999999999999965 68999999987544444456778999999999999999999999998889999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++ +|.+++... ...+++.....++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 85 LDS-DLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 985 888877643 23478889999999999999999999 99999999999999999999999999997654322
Q ss_pred cceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh----------
Q 007073 453 TNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER---------- 521 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 521 (619)
. ......|++.|+|||.+.+ ..++.++||||+||++|||+||+.||........ +.........
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 158 K-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE----LHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred c-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCChHHhhccc
Confidence 2 1233457899999998865 5689999999999999999999999965332111 1111110000
Q ss_pred -hcccchhccccccCCC----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 -EKRLDAIVDRNLNKNY----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 -~~~~~~~~~~~l~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.........+...... .+....+..+++.+|++.||.+|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000101000000 1122356789999999999999999999974
No 55
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.1e-39 Score=328.87 Aligned_cols=263 Identities=19% Similarity=0.225 Sum_probs=209.8
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
....++|+..++||+|+||.||.|+-+ +|..+|+|++++.. ...+.+....|-.+|...++|.||+++-.|++.+..
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 346678999999999999999999965 69999999998653 345667888999999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
||||||++||++..+|... ..++....+.++.+++-|+..+|+. |+|||||||+|+|||..|++||+|||++.
T Consensus 217 YLiMEylPGGD~mTLL~~~----~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~ 289 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK----DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLST 289 (550)
T ss_pred EEEEEecCCccHHHHHHhc----CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccc
Confidence 9999999999999999863 3488899999999999999999999 99999999999999999999999999985
Q ss_pred eeccC----------------------Ccc-----e-------------------eeeccccccccccccccCCCCCcch
Q 007073 447 LVDVR----------------------KTN-----V-------------------TTQVRGTMGHIAPEYLSTGKSSERT 480 (619)
Q Consensus 447 ~~~~~----------------------~~~-----~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~ 480 (619)
-+... +.. . ....+|||-|||||++.+..|+..+
T Consensus 290 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~c 369 (550)
T KOG0605|consen 290 GLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKEC 369 (550)
T ss_pred hhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccc
Confidence 43110 000 0 0124699999999999999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCC
Q 007073 481 DVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDR 560 (619)
Q Consensus 481 Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R 560 (619)
|+||+|||+|||+.|.+||......+.. ..+..|...+..+. ......+..+||.+|+. ||++|
T Consensus 370 DwWSLG~ImyEmLvGyPPF~s~tp~~T~-rkI~nwr~~l~fP~--------------~~~~s~eA~DLI~rll~-d~~~R 433 (550)
T KOG0605|consen 370 DWWSLGCIMYEMLVGYPPFCSETPQETY-RKIVNWRETLKFPE--------------EVDLSDEAKDLITRLLC-DPENR 433 (550)
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhhhccCCC--------------cCcccHHHHHHHHHHhc-CHHHh
Confidence 9999999999999999999765433221 12223332222111 11222578899999999 99999
Q ss_pred CCHHHHHHHHhcCCcc
Q 007073 561 PAMSEVVRMLEGEGLA 576 (619)
Q Consensus 561 Ps~~evl~~L~~~~~~ 576 (619)
-. ..=++.+++..++
T Consensus 434 LG-~~G~~EIK~HPfF 448 (550)
T KOG0605|consen 434 LG-SKGAEEIKKHPFF 448 (550)
T ss_pred cC-cccHHHHhcCCcc
Confidence 87 3334555555544
No 56
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.8e-39 Score=334.89 Aligned_cols=263 Identities=27% Similarity=0.415 Sum_probs=205.1
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTP 363 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 363 (619)
+..++|++.+.||+|+||.||+|... +++.||+|+++........+.+.+|+.++.++ +|+||+++++++...
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 44567899999999999999999742 35789999987544444556788999999999 799999999988654
Q ss_pred -CcceeEecccccchhhhhhcccCCC------------------------------------------------------
Q 007073 364 -TERLLVYPFMQNLSVAYRLREIKPG------------------------------------------------------ 388 (619)
Q Consensus 364 -~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------ 388 (619)
...++++||+++++|.+++......
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 4577899999999999888542210
Q ss_pred ---CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce-eeecccccc
Q 007073 389 ---EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV-TTQVRGTMG 464 (619)
Q Consensus 389 ---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~ 464 (619)
...+++..+.+++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.+....... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 12578999999999999999999999 99999999999999999999999999998764332221 223346778
Q ss_pred ccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHH
Q 007073 465 HIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVE 543 (619)
Q Consensus 465 y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 543 (619)
|+|||++.+..++.++|||||||++|||+| |..||....... .+. .... ... ....+.....
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~----~~~---~~~~-~~~---------~~~~~~~~~~ 303 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE----EFC---RRLK-EGT---------RMRAPEYATP 303 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH----HHH---HHHh-ccC---------CCCCCccCCH
Confidence 999999999999999999999999999998 999986422110 011 1111 000 0011122346
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 544 TMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 544 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
++.+++.+||+.+|++||++.++++.|++.
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 789999999999999999999999999863
No 57
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=347.21 Aligned_cols=252 Identities=29% Similarity=0.439 Sum_probs=211.0
Q ss_pred cccCccccCCCceEEEEEe-CCC----cEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 297 SEKNVLGQGGFGKVYRGVL-ADG----TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 297 ~~~~~lg~G~fg~Vy~~~~-~~g----~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
...++||+|+||+||+|.| .+| -+||+|++.+........+++.|+-.|++++|||+++++|+|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 3467999999999999996 333 4799999988888888899999999999999999999999998777 889999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
||+.|+|.++++..+. .+.....+.|..|||+||.|||++ ++|||||.++|||+..-..+||.|||+++....+
T Consensus 778 ~mP~G~LlDyvr~hr~---~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRD---NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred hcccchHHHHHHHhhc---cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 9999999999998543 477888899999999999999999 9999999999999999999999999999988765
Q ss_pred Ccceeee-ccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 452 KTNVTTQ-VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 452 ~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
....... ..-.+.|||-|.+....|+.++|||||||++||++| |..|++....++ .-..++.+.+
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------I~dlle~geR----- 918 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------IPDLLEKGER----- 918 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------hhHHHhcccc-----
Confidence 5443332 233568999999999999999999999999999999 899987544321 1111112222
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
-..++-+..++..++.+||..|++.||+++++...+.+.
T Consensus 919 -----LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 919 -----LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred -----CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 123555667899999999999999999999999887764
No 58
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1e-38 Score=318.90 Aligned_cols=252 Identities=24% Similarity=0.364 Sum_probs=203.3
Q ss_pred cCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
++|.+.+.||+|+||+||+|.+.++..+|+|.+.... ...+.|.+|+.++++++||||+++++++......++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc--ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 4577889999999999999998777789999886432 23567899999999999999999999999888899999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++|+|.+++.... ..+++..+.+++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.++.......
T Consensus 82 ~~~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 82 SNGCLLNYLREHG---KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred CCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 9999999887532 2488999999999999999999999 999999999999999999999999999986643322
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .. ..........
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~---~~~~~~~~~~------- 220 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS-----ET---VEKVSQGLRL------- 220 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HH---HHHHhcCCCC-------
Confidence 22223345678999999998889999999999999999999 99998532211 11 1111111110
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
......+..+.+++.+||+.+|++||++.++++.|+
T Consensus 221 ---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 ---YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 011122468899999999999999999999998764
No 59
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-38 Score=323.70 Aligned_cols=258 Identities=24% Similarity=0.397 Sum_probs=204.6
Q ss_pred cCCcccCccccCCCceEEEEEe-----CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
++|++.+.||+|+||.||+|.+ .++..||+|.+...........+.+|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577789999999999999984 25678999999754444455788999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCC-------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 369 VYPFMQNLSVAYRLREIKP-------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
||||+++++|.+++..... ....+++.....++.|++.||+|||++ +++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999999853221 123478888999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007073 436 EAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 513 (619)
.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||+| |..||..... ....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-----~~~~ 236 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-----QEVI 236 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHH
Confidence 999999999986543222 11223345678999999988889999999999999999999 8888853221 1111
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
+ ........ ..+...+..+.+++.+||+.+|++||++.+|.+.|++
T Consensus 237 ~---~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 237 E---MVRKRQLL----------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred H---HHHcCCcC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 11110000 1112234578899999999999999999999999875
No 60
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.3e-38 Score=314.95 Aligned_cols=248 Identities=29% Similarity=0.418 Sum_probs=200.1
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchhh
Q 007073 300 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVA 379 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 379 (619)
++||+|+||.||+|...+++.||+|.+...........+.+|++++++++||||+++++++......++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46899999999999988899999999875544444567899999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeec
Q 007073 380 YRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 459 (619)
Q Consensus 380 ~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 459 (619)
+++.... ..+++..+..++.|++.||.|+|++ +++||||||+||+++.++.+||+|||++..............
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 81 SFLRKKK---DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 9886532 3478999999999999999999999 999999999999999999999999999975433222222222
Q ss_pred cccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCC
Q 007073 460 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYN 538 (619)
Q Consensus 460 ~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 538 (619)
.++..|+|||++.++.++.++||||||+++||+++ |..||...... ........... ....
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~----------~~~~ 216 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEKGYR----------MSCP 216 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCCC----------CCCC
Confidence 34668999999998999999999999999999999 89898643211 11111111111 1111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 539 IQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 539 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
...+..+.+++.+|++.+|++||++.++++.|.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 223467899999999999999999999999875
No 61
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=9.9e-39 Score=334.37 Aligned_cols=249 Identities=20% Similarity=0.317 Sum_probs=194.1
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|+..+.||+|+||.||+|.+. +|+.||||.+...........+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 34555788999999999999965 68999999986544444567889999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++|+|.... .........++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 154 ~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 154 MDGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred CCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 9999986432 245667788999999999999999 99999999999999999999999999998764321
Q ss_pred cceeeeccccccccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 453 TNVTTQVRGTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
.......||..|+|||.+.. ...+.++|||||||++|||++|+.||....... ............
T Consensus 223 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~---- 292 (353)
T PLN00034 223 -DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD-----WASLMCAICMSQ---- 292 (353)
T ss_pred -ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-----HHHHHHHHhccC----
Confidence 12234568999999998743 234568999999999999999999997322110 001111110000
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..........++.+++.+||+.||++||++.|+++.
T Consensus 293 ------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 ------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011122334678999999999999999999999863
No 62
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-38 Score=329.09 Aligned_cols=202 Identities=24% Similarity=0.340 Sum_probs=176.0
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..++|++.+.||+|+||.||++.+. +|..+|+|.+...........+.+|++++++++|+||+++++++...+..++||
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 3578999999999999999999976 688999998865444445577899999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++... ..+++.....++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 83 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 83 EHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred ecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 999999999998753 23788888999999999999999742 699999999999999999999999999875532
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
. ......|+..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 157 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred h---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 2 123346899999999999888999999999999999999999999743
No 63
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.3e-39 Score=333.21 Aligned_cols=254 Identities=20% Similarity=0.245 Sum_probs=203.4
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||.||+|... +|+.||+|++.... .......+.+|++++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999976 58999999986432 2234567889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++... ..+++.....++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL----GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 999999999999753 2478889999999999999999999 999999999999999999999999999976533
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
......||+.|+|||++.+..++.++|||||||++|||+||+.||....... ......... ....
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--------~~~~i~~~~---~~~~ 218 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE--------TWENLKYWK---ETLQ 218 (333)
T ss_pred ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH--------HHHHHHhcc---cccc
Confidence 2234568999999999999999999999999999999999999997533211 111111000 0011
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
...........+.++.+++.+|++.+|++||++.++++.
T Consensus 219 ~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 219 RPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000000012334678899999999999999999999864
No 64
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=8.1e-39 Score=320.35 Aligned_cols=257 Identities=28% Similarity=0.433 Sum_probs=209.4
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
....+|+..+.||+|+||.||+|...++..+|+|.+.... ......+..|+.+++.++|+||+++++++...+..++||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc-hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 3456788899999999999999999889999999986432 234567889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++|+||||+||++++++.+||+|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 82 ELMEKGSLLAFLRSPE--GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred eecccCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 9999999999997643 24488999999999999999999999 999999999999999999999999999986643
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.... .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||..... . +........
T Consensus 157 ~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~-----~---~~~~~~~~~------- 220 (261)
T cd05148 157 DVYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN-----H---EVYDQITAG------- 220 (261)
T ss_pred cccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH-----H---HHHHHHHhC-------
Confidence 2221 223346778999999998899999999999999999999 8888854321 1 111111111
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.....+...+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus 221 ---~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 221 ---YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred ---CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 0111123344678999999999999999999999999975
No 65
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=7.9e-39 Score=338.42 Aligned_cols=265 Identities=24% Similarity=0.355 Sum_probs=207.7
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeee
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCT 361 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~ 361 (619)
++...++|.+.+.||+|+||.||+|.+. .++.||||+++..........+.+|++++.++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 3445567888899999999999999863 346899999975444444567889999999997 999999999999
Q ss_pred CCCcceeEecccccchhhhhhcccCC------------------------------------------------------
Q 007073 362 TPTERLLVYPFMQNLSVAYRLREIKP------------------------------------------------------ 387 (619)
Q Consensus 362 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------ 387 (619)
.....++|+||+++|+|.++++....
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999865321
Q ss_pred ----------------------------------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 007073 388 ----------------------------------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAA 427 (619)
Q Consensus 388 ----------------------------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~ 427 (619)
....+++....+++.|++.||+|||+. +++||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence 112467788899999999999999998 9999999999
Q ss_pred cEEeCCCCcEEEcccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccc
Q 007073 428 NVLLDEDFEAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLE 505 (619)
Q Consensus 428 NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~ 505 (619)
|||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 99999999999999999986532221 11222346788999999998889999999999999999998 88888643211
Q ss_pred cccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 506 EEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
. .. ........ ....+...+.++.+++.+||+.+|++||++.+|++.|++.
T Consensus 349 ~----~~---~~~~~~~~----------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 349 E----QF---YNAIKRGY----------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred H----HH---HHHHHcCC----------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0 00 01111110 0111222346889999999999999999999999999863
No 66
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.6e-39 Score=327.70 Aligned_cols=244 Identities=21% Similarity=0.221 Sum_probs=198.6
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||.||+|... +|+.||+|++.... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999975 68999999986322 2234567889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++.... .+++.....++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRNSG----RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 9999999999987532 378888999999999999999999 999999999999999999999999999986532
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
. .....|++.|+|||.+.+..++.++|||||||++|||+||+.||...... ......... .
T Consensus 154 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~-~------ 214 (291)
T cd05612 154 R----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--------GIYEKILAG-K------ 214 (291)
T ss_pred C----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhC-C------
Confidence 2 22346899999999999988999999999999999999999998643211 111111110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPA-----MSEVV 567 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl 567 (619)
. .++......+.+++.+|++.||.+||+ +.+++
T Consensus 215 --~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l 252 (291)
T cd05612 215 --L--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVK 252 (291)
T ss_pred --c--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHh
Confidence 0 111222457889999999999999995 66665
No 67
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.9e-38 Score=317.54 Aligned_cols=255 Identities=25% Similarity=0.402 Sum_probs=204.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
..++|++.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+|++++++++. ....+++||
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 3457888899999999999999988888999999864322 3467899999999999999999999875 456789999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.++++... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 81 YMSKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred ecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 999999999987532 23478999999999999999999999 9999999999999999999999999999876443
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.........++..|+|||.+.+..++.++||||||+++|||++ |+.||..... . +........
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-----~---~~~~~~~~~-------- 219 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-----R---EVLEQVERG-------- 219 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH-----H---HHHHHHHcC--------
Confidence 2222223345678999999988899999999999999999999 8888853211 1 111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.....+...+..+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 220 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 220 --YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111122344678999999999999999999999999875
No 68
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.6e-38 Score=321.82 Aligned_cols=261 Identities=25% Similarity=0.403 Sum_probs=209.7
Q ss_pred HhcCCcccCccccCCCceEEEEEeCC-----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC-CCc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLAD-----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT-PTE 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 365 (619)
..++|.+.++||+|+||.||+|.+.+ +..||+|++...........+.+|+.++++++|+||+++++++.. +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45788899999999999999999765 788999998765555566788999999999999999999998866 467
Q ss_pred ceeEecccccchhhhhhcccCCC----CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPG----EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGD 441 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 441 (619)
.+++++|+++++|.+++...... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 88999999999999998764332 25589999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHH
Q 007073 442 FGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKL 519 (619)
Q Consensus 442 fGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 519 (619)
||+++.+....... .....++..|+|||++.+..++.++||||||+++||+++ |+.||..... . +.....
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~---~~~~~~ 232 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-----F---EMAAYL 232 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-----H---HHHHHH
Confidence 99998654333221 122345678999999988889999999999999999999 9999864221 1 111111
Q ss_pred hhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 520 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...... ......+..+.+++.+||+.+|++|||+.++++.|++.
T Consensus 233 ~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 233 KDGYRL----------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred HcCCCC----------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 111111 01112345789999999999999999999999999874
No 69
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.6e-38 Score=325.79 Aligned_cols=265 Identities=23% Similarity=0.302 Sum_probs=197.5
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|++.+.||+|+||.||+|... +|+.||||.+...........+.+|+.+++.++||||+++++++..+...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467899999999999999999975 6899999998754433444567889999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|++ ++|.+++... ...++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 84 YVH-TDLCQYMDKH---PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CCC-cCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 996 5676666542 23378888999999999999999999 9999999999999999999999999999754322
Q ss_pred CcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc--ccc--
Q 007073 452 KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK--RLD-- 526 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-- 526 (619)
. .......|++.|+|||.+.+ ..++.++||||+||++|||+||+.||....... ..+........... ...
T Consensus 157 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 157 S-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ---DQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred C-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH---HHHHHHHHHhCCCChhhccch
Confidence 2 12233458899999998865 458899999999999999999999997432110 00000000000000 000
Q ss_pred -h--hccc-ccc---C-CC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 -A--IVDR-NLN---K-NY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 -~--~~~~-~l~---~-~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ...+ ... . .. .......+.+++.+|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0 0000 000 0 00 0011246789999999999999999999884
No 70
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-39 Score=330.94 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=214.6
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC-CCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc-ceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF-ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE-RLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~lv~ 370 (619)
++|...+.+|+|+||.++..+++ +++.+++|.+.-. .+........+|+.++++++|||||.+.+.+..++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56888999999999999999965 6889999988633 233445578899999999999999999999999888 89999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
+|++||++.+.+.+.+ +..++.....+++.|++.|+.|||++ +|+|||||+.||+++.+..|||+|||+|+.+..
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999998765 45689999999999999999999998 999999999999999999999999999999876
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
... ....+.||+.||.||.+.+.+|..|+||||+||++|||++-+++|....+.+ .+.+.. .
T Consensus 159 ~~~-~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~--------Li~ki~---------~ 220 (426)
T KOG0589|consen 159 EDS-LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE--------LILKIN---------R 220 (426)
T ss_pred chh-hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH--------HHHHHh---------h
Confidence 552 3455779999999999999999999999999999999999999997654321 111111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
. .....+..++.++..++..|++.+|..||++.+++.+
T Consensus 221 ~-~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 221 G-LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred c-cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1 1123456677899999999999999999999999976
No 71
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.3e-38 Score=315.38 Aligned_cols=248 Identities=28% Similarity=0.408 Sum_probs=197.7
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchh
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSV 378 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 378 (619)
+.||+|+||.||+|... +|+.||+|.............+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999974 78999999886544455567899999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCccee-e
Q 007073 379 AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT-T 457 (619)
Q Consensus 379 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~-~ 457 (619)
.+++... ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++........... .
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRTE---GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 9998653 23478999999999999999999999 999999999999999999999999999875432211111 1
Q ss_pred eccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCC
Q 007073 458 QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKN 536 (619)
Q Consensus 458 ~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 536 (619)
...++..|+|||.+.++.++.++||||||+++|||++ |..||...... ........ .....
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~~~~~~~~----------~~~~~ 216 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------QTREAIEQ----------GVRLP 216 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------HHHHHHHc----------CCCCC
Confidence 1123457999999999999999999999999999998 88887532110 00011100 00111
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 537 YNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 537 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
.+...+..+.+++.+|++.+|++|||+.++.++|+
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 12233467899999999999999999999999886
No 72
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.3e-38 Score=316.00 Aligned_cols=261 Identities=22% Similarity=0.361 Sum_probs=212.6
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC--CCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||.||+|... +|+.||+|.++.. ......+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999976 7999999988632 22334678899999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|..++.........++...+..++.+++.||+|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999999876555556689999999999999999999999 999999999999999999999999999886543
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.... .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+.......
T Consensus 159 ~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~--------- 222 (267)
T cd08224 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEK--------- 222 (267)
T ss_pred CCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc------HHHHHhhhhc---------
Confidence 3222 22345888999999999888999999999999999999999998543211 1111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..............+.+++.+||+.+|++|||+.+|+++|+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 223 CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 0011111224456889999999999999999999999999875
No 73
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-38 Score=334.80 Aligned_cols=262 Identities=20% Similarity=0.241 Sum_probs=197.1
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
...+|++.+.||+|+||.||++... +++.||+|... ...+.+|++++++++||||+++++++......++|+
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 3457999999999999999999964 68899999653 235678999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
|++. ++|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 163 e~~~-~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 163 PRYK-TDLYCYLAAK----RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred ecCC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 9986 5777777543 2378899999999999999999999 999999999999999999999999999975433
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccc---cchhHHHHHHHHhh---h--
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE---DDVLLLDHVKKLER---E-- 522 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~---~-- 522 (619)
..........||+.|+|||++.+..++.++|||||||++|||+||+.|+........ ....+......... .
T Consensus 235 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 235 INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred ccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 222233445799999999999999999999999999999999999988643211100 00011111110000 0
Q ss_pred ----cccchhc---------cccccCC--CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 ----KRLDAIV---------DRNLNKN--YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 ----~~~~~~~---------~~~l~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+.... .+..... .....+.++.+++.+|++.||++|||++|+++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000 0000000 01133467899999999999999999999984
No 74
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.7e-38 Score=322.14 Aligned_cols=267 Identities=25% Similarity=0.339 Sum_probs=202.5
Q ss_pred CcccCccccCCCceEEEEEe-----CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC--Cccee
Q 007073 296 FSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLL 368 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 368 (619)
|...+.||+|+||+||++.. .+++.||+|.++..........|.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37789999999999988653 367899999987544444567889999999999999999999988654 34789
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++++|.+++... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 v~e~~~~~~l~~~~~~~-----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EecCCCCCCHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence 99999999999998652 389999999999999999999999 9999999999999999999999999999866
Q ss_pred ccCCcce--eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 449 DVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 449 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
....... .....++..|+|||.+.+..++.++||||||+++|||+||+.|+........ ................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~ 234 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE---EMIGPKQGQMTVVRLI 234 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh---hhhcccccccchhhhh
Confidence 4322211 1122356679999999888999999999999999999999999854321100 0000000000000111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+.......+...+..+.+++.+||+.+|++|||+++++++|+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 235 ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 11111111112233456899999999999999999999999999874
No 75
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=8.7e-39 Score=325.94 Aligned_cols=265 Identities=28% Similarity=0.413 Sum_probs=210.2
Q ss_pred HHHHHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeee
Q 007073 288 ELQLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFC 360 (619)
Q Consensus 288 el~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~ 360 (619)
++....++|+..+.||+|+||.||++... +...+|+|.+...........+.+|++++.++ +|+||+++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34456678889999999999999999864 23679999987544444556788999999999 799999999999
Q ss_pred eCCCcceeEecccccchhhhhhcccC------------CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007073 361 TTPTERLLVYPFMQNLSVAYRLREIK------------PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 428 (619)
Q Consensus 361 ~~~~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 428 (619)
......+++|||+++|+|..+++... .....+++..+.+++.|++.||+|||+. +|+||||||+|
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~N 162 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARN 162 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccceee
Confidence 99999999999999999999986532 2234688999999999999999999999 99999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccc
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEE 506 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~ 506 (619)
|++++++.+||+|||+++.+....... .....++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~- 241 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE- 241 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-
Confidence 999999999999999998664332211 122235678999999988899999999999999999998 88887532211
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+......... ....+......+.+++.+||+.+|++|||+.++++.|++.
T Consensus 242 -------~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 242 -------ELFKLLKEGY----------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred -------HHHHHHHcCC----------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 1111111110 0111223346789999999999999999999999999864
No 76
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.9e-38 Score=316.87 Aligned_cols=251 Identities=25% Similarity=0.365 Sum_probs=201.8
Q ss_pred cCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
.+|++.+.||+|+||.||+|.++++..+|+|.+.+.. .....|.+|++++++++|+||+++++++......++|+||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA--MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 3577789999999999999998877899999886432 23457889999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 82 ANGCLLNYLRERK---GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred CCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 9999999987532 2488999999999999999999999 999999999999999999999999999986543222
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.......++..|+|||.+.+..++.++||||||+++|||+| |+.||+..... +.........
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~--------- 218 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--------EVVESVSAGY--------- 218 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--------HHHHHHHcCC---------
Confidence 21222234567999999999999999999999999999999 78888643211 1111111100
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 570 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 570 (619)
....+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus 219 -~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 219 -RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0011122356899999999999999999999999886
No 77
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.1e-38 Score=315.66 Aligned_cols=254 Identities=26% Similarity=0.387 Sum_probs=204.1
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
.++|++.+.||+|+||.||+|.+.++..||+|++.... ...+.|.+|++++++++|+||+++++++. ....++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc--cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 45688999999999999999998777789999986422 23467899999999999999999999874 4557899999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 82 MSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred CCCCcHHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999997532 23478899999999999999999999 99999999999999999999999999998765433
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
........++..|+|||...+..++.++||||||+++|||+| |+.||...... ..........
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~~~-------- 220 (262)
T cd05071 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGY-------- 220 (262)
T ss_pred cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhcCC--------
Confidence 322223446778999999998899999999999999999999 77787532210 0111111100
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
........+..+.+++.+|++.+|++||++.++++.|+.
T Consensus 221 --~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 221 --RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred --CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 011123445678999999999999999999999999976
No 78
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.5e-38 Score=323.72 Aligned_cols=263 Identities=24% Similarity=0.345 Sum_probs=195.0
Q ss_pred cCCcccCccccCCCceEEEEEeC--CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHc---cCCCccceeeeeeC-----
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA--DGTKVAVKRLTDFES-PGGDAAFQREVEMISVA---VHRNLLRLIGFCTT----- 362 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~--~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~----- 362 (619)
++|++.+.||+|+||.||+|... +|+.||+|+++.... ......+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999863 468899998864332 22345567788877765 69999999998852
Q ss_pred CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
....++||||+. ++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 345789999997 588888865332 3478899999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh--
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE-- 520 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 520 (619)
|+++..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .+........
T Consensus 155 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~----~~~~i~~~~~~~ 228 (290)
T cd07862 155 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD----QLGKILDVIGLP 228 (290)
T ss_pred cceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH----HHHHHHHHhCCC
Confidence 999865433 22334568999999999988899999999999999999999999997532211 1111111100
Q ss_pred hhccc-c------hhccccccC---CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 521 REKRL-D------AIVDRNLNK---NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 521 ~~~~~-~------~~~~~~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+... . ......... ...+.....+.+++.+|++.||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 229 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred ChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000 0 000000000 001223456789999999999999999999985
No 79
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.4e-38 Score=322.34 Aligned_cols=258 Identities=28% Similarity=0.392 Sum_probs=204.3
Q ss_pred CCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
+|.+.+.||+|+||.||+|... ....+|+|.+...........+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677899999999999999853 2357899988754444455788999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCC--------------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007073 369 VYPFMQNLSVAYRLREIKP--------------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 428 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 428 (619)
++||+.+++|.+++..... ....+++.....++.|++.||+|||+. +++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 9999999999998864321 123478899999999999999999999 99999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccc
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEE 506 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~ 506 (619)
|++++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE- 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 99999999999999999865332221 1222345678999999988889999999999999999999 99998643211
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.+... .... .....+...+.++.+++.+|++.+|++||++.++++.|+++
T Consensus 237 ----~~~~~---~~~~----------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 237 ----RLFNL---LKTG----------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred ----HHHHH---HhCC----------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 11111 1110 01111222345788999999999999999999999999874
No 80
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.9e-38 Score=319.84 Aligned_cols=255 Identities=22% Similarity=0.357 Sum_probs=199.7
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCc----EEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
++|+..+.||+|+||+||+|.+. +|+ .+++|.+..........++..|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46778899999999999999974 344 4788887543333345677888889999999999999998754 45778
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
++||+++|+|.+++.... ..+++.....++.|++.||+|||++ +++||||||+||++++++.+||+|||+++..
T Consensus 86 i~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR---DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEeCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 999999999999997532 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 449 DVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 449 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
...... ......++..|+|||.+.++.++.++||||||+++|||+| |+.||...... ...+.. ..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~~~~~----~~~~~- 229 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-----EVPDLL----EKGER- 229 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHH----HCCCc-
Confidence 433221 2234457789999999998999999999999999999998 99998643211 111111 11110
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
... +......+.+++.+||+.+|++|||+.|+++.|+..
T Consensus 230 -~~~-------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 230 -LAQ-------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred -CCC-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 000 111234678899999999999999999999988773
No 81
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-39 Score=314.64 Aligned_cols=259 Identities=24% Similarity=0.327 Sum_probs=197.4
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC-----ccee
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-----ERLL 368 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~l 368 (619)
.|...+++|.|+||.||+|... ++..||||+...... --.+|+.+|+.++|||||++.-++.... ...+
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 4566789999999999999964 579999998853221 1136899999999999999988875432 2458
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEccccccee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLAKL 447 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla~~ 447 (619)
|||||+. +|.+.++.+...+..++...++-+..|+.+||+|||+. +|+||||||.|+|+|.+ +.+||+|||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999997 99999987665666688888889999999999999998 99999999999999977 9999999999998
Q ss_pred eccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--cc
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE--KR 524 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 524 (619)
+...... ..+..|..|.|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.+.. ..+...++-+..+ +.
T Consensus 176 L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~----dQL~eIik~lG~Pt~e~ 249 (364)
T KOG0658|consen 176 LVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV----DQLVEIIKVLGTPTRED 249 (364)
T ss_pred eccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH----HHHHHHHHHhCCCCHHH
Confidence 8665544 344568899999998774 6999999999999999999999998763321 1122222211111 00
Q ss_pred cc-------hhccccccC-----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LD-------AIVDRNLNK-----NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~-------~~~~~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+. +...+.+.. -+......+..+++.++++.+|.+|.++.|++.
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 00 011111111 123345578899999999999999999999873
No 82
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.9e-38 Score=320.73 Aligned_cols=259 Identities=26% Similarity=0.384 Sum_probs=204.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeCC------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
..++|.+.+.||+|+||.||+|.+.+ +..||+|.............|.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 45678889999999999999999753 567999988654444456779999999999999999999999998889
Q ss_pred ceeEecccccchhhhhhcccCCC---CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---cEEE
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPG---EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF---EAVV 439 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 439 (619)
.++||||+++++|.+++...... ...+++..+.+++.|++.||+|||++ +++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 99999999999999998765321 23589999999999999999999999 999999999999998654 6999
Q ss_pred cccccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHH
Q 007073 440 GDFGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 440 ~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
+|||+++......... ......+..|+|||++.+..++.++|||||||++|||+| |..||+..... ... .
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-----~~~---~ 232 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-----EVM---E 232 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHH---H
Confidence 9999998663222111 112223568999999999999999999999999999997 99998643211 111 1
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
....... ...+...+..+.+++.+|++.+|++||++.+|++.|+
T Consensus 233 ~~~~~~~----------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 233 FVTGGGR----------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHcCCc----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111100 1112223467899999999999999999999999885
No 83
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=329.89 Aligned_cols=240 Identities=23% Similarity=0.251 Sum_probs=196.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|++.+.||+|+||.||+|.+. +|+.||+|.+.... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 356888999999999999999975 68999999986422 223456788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|.+++... ..++......++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 97 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 97 LEFVVGGELFTHLRKA----GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred EcCCCCChHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 9999999999998753 2378888889999999999999999 99999999999999999999999999998664
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
... ....||+.|+|||.+.+..++.++|||||||++|||+||+.||..... ......... +..
T Consensus 170 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------~~~~~~i~~-~~~---- 232 (329)
T PTZ00263 170 DRT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--------FRIYEKILA-GRL---- 232 (329)
T ss_pred CCc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--------HHHHHHHhc-CCc----
Confidence 322 234689999999999999999999999999999999999999964221 011111111 110
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCC
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPA 562 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs 562 (619)
.++......+.+++.+||+.||++||+
T Consensus 233 ------~~p~~~~~~~~~li~~~L~~dP~~R~~ 259 (329)
T PTZ00263 233 ------KFPNWFDGRARDLVKGLLQTDHTKRLG 259 (329)
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHHcCC
Confidence 011112346789999999999999997
No 84
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7e-39 Score=331.27 Aligned_cols=242 Identities=21% Similarity=0.236 Sum_probs=195.3
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
+.||+|+||.||++... +|+.||+|+++... .......+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999964 78999999986432 2234456788999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCccee
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 456 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 456 (619)
+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~ 152 (323)
T cd05571 81 ELFFHLSRE----RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATM 152 (323)
T ss_pred cHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcc
Confidence 999888753 3478899999999999999999999 9999999999999999999999999998753222 1223
Q ss_pred eeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCC
Q 007073 457 TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKN 536 (619)
Q Consensus 457 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 536 (619)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .. ...... +. ..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-----~~---~~~~~~-~~----------~~ 213 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KL---FELILM-EE----------IR 213 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH-----HH---HHHHHc-CC----------CC
Confidence 3456999999999999999999999999999999999999999642211 01 111100 00 01
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 537 YNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 537 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
++.....++.+++.+|++.||++|| ++.++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1223346788999999999999999 7888764
No 85
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=322.20 Aligned_cols=269 Identities=28% Similarity=0.378 Sum_probs=200.9
Q ss_pred cCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHH--ccCCCccceeeeeeCCC----cce
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISV--AVHRNLLRLIGFCTTPT----ERL 367 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~ 367 (619)
......++||+|.||.||+|.+. ++.||||++. ....+.|..|-++++. ++|+||++++++-.... +++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecC----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 33445678999999999999995 6999999986 3457889999999874 67999999999876555 789
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhc------CCCCeEecCCCCCcEEeCCCCcEEEcc
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH------CNPKIIHRDVKAANVLLDEDFEAVVGD 441 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------~~~~ivH~Dlkp~NIll~~~~~~kl~D 441 (619)
||++|.++|+|.++|..+ .++|....+|+..+++||+|||+. .+|+|+|||||++|||+..|+++.|+|
T Consensus 285 LVt~fh~kGsL~dyL~~n-----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKAN-----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred EEeeeccCCcHHHHHHhc-----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 999999999999999863 489999999999999999999974 467899999999999999999999999
Q ss_pred cccceeeccCCcc-eeeeccccccccccccccCCC-C-----CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007073 442 FGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGK-S-----SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 442 fGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~-----~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 514 (619)
||+|..+...... ..-..+||.+|||||++.+.. + -.+.||||+|.|+|||+++...++....++ ...-+-.
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~-Yqlpfe~ 438 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPE-YQLPFEA 438 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCc-ccCchhH
Confidence 9999988654332 223467999999999996542 2 246899999999999999776554211111 1111110
Q ss_pred HHHHHhhhcccch-hccccccCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 515 HVKKLEREKRLDA-IVDRNLNKNYN-----IQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 515 ~~~~~~~~~~~~~-~~~~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
-+.....-+.+++ ++..+.++.++ -..+..+.+.+..||..||+.|-|+.=|.+++..+
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 1111111111111 11111122111 13456788999999999999999998888777654
No 86
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.7e-38 Score=316.54 Aligned_cols=256 Identities=27% Similarity=0.415 Sum_probs=206.2
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
+..++|.+.++||+|+||.||+|..++++.||+|.+.... .....+.+|+.++++++|+||+++++++ ..+..+++|
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~ 79 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS--MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIIT 79 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC--CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEE
Confidence 3456788899999999999999999889999999986433 2356789999999999999999999986 455689999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.....
T Consensus 80 e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 80 EYMENGSLVDFLKTPE--GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EcCCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 9999999999886533 23588999999999999999999998 999999999999999999999999999987653
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
..........++..|+|||.+.+..++.++||||||+++|||+| |+.||...... +..........
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~----- 221 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--------EVIQNLERGYR----- 221 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHHcCCC-----
Confidence 32222223345678999999998889999999999999999999 99998643211 11111111100
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.......+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 222 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 -----MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 01112234579999999999999999999999999875
No 87
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.7e-38 Score=322.20 Aligned_cols=258 Identities=22% Similarity=0.328 Sum_probs=203.5
Q ss_pred cCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.+|.+.+.||+|+||.||+|... ++..||+|++.........+.+.+|+.+++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 34667789999999999999863 357899999975443334567889999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCC------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 368 LVYPFMQNLSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
+++||+++++|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence 99999999999999853211 123478888999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007073 436 EAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 513 (619)
.+||+|||+++....... .......+++.|+|||.+.++.++.++|||||||++|||+| |..||..... .
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~ 233 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------Q 233 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--------H
Confidence 999999999886543221 11223346789999999988899999999999999999998 7777753211 1
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
+.......... ...+.+.+..+.+++.+||+.+|++||++++|++.|+.
T Consensus 234 ~~~~~i~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 DVIEMIRNRQV----------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHcCCc----------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11111111110 11223345678999999999999999999999999874
No 88
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.4e-38 Score=321.93 Aligned_cols=263 Identities=25% Similarity=0.411 Sum_probs=207.2
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
+...++|++.+.||+|+||.||+|..+ .+..||+|.+...........+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 346788999999999999999999753 24589999886544444456788999999999999999999999999
Q ss_pred CcceeEecccccchhhhhhcccCC------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKP------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEA 437 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 437 (619)
...++||||+++|+|.+++..... +....++..+.+++.|++.||.|||++ +|+||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 999999999999999999975332 123456778889999999999999999 99999999999999999999
Q ss_pred EEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHH
Q 007073 438 VVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDH 515 (619)
Q Consensus 438 kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 515 (619)
+|+|||+++........ ......++..|+|||.+.++.++.++|||||||++|||++ |..||...... +.
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--------~~ 230 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------QV 230 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HH
Confidence 99999999865332221 1122235678999999998899999999999999999999 78887532211 11
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.......... ..+...+..+.+++.+|++.+|++|||+.++++.|++.
T Consensus 231 ~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 231 LKFVMDGGYL----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHHcCCCC----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1111111100 11122246899999999999999999999999999874
No 89
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=332.50 Aligned_cols=247 Identities=27% Similarity=0.356 Sum_probs=205.1
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCC
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPT 364 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 364 (619)
.....++|...++||+|.||+|+++..+ +++.+|||++++.. ..+..+..+.|.+++.... ||.++.++..+++.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 3456678999999999999999999976 67899999998754 3456778889999987765 999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
+.+.||||..||++..+.+ ...++.....-++..|+.||.|||++ +||+||||-+|||+|.+|++||+|||+
T Consensus 443 ~l~fvmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGl 514 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGL 514 (694)
T ss_pred eEEEEEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccc
Confidence 9999999999999433333 23489999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
++..- .....++..+||+.|||||++.+..|+.++|+|||||+||||+.|..||.....++-
T Consensus 515 cKe~m-~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~----------------- 576 (694)
T KOG0694|consen 515 CKEGM-GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV----------------- 576 (694)
T ss_pred ccccC-CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH-----------------
Confidence 98643 233356678999999999999999999999999999999999999999975443211
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
...++... ..++...+.+...++.+.+..+|++|--+
T Consensus 577 FdsI~~d~--~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 577 FDSIVNDE--VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHhcCC--CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11111111 12344555788999999999999999766
No 90
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=317.10 Aligned_cols=258 Identities=26% Similarity=0.318 Sum_probs=203.5
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-------------cchHHHHHHHHHHHHHccCCCccce
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-------------PGGDAAFQREVEMISVAVHRNLLRL 356 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------------~~~~~~~~~E~~~l~~l~H~niv~l 356 (619)
...++|++.+.||+|.||.|-+|... +++.||||++.+... ....+...+|+.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34578999999999999999999964 799999999864211 1123578899999999999999999
Q ss_pred eeeeeCC--CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC
Q 007073 357 IGFCTTP--TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED 434 (619)
Q Consensus 357 ~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 434 (619)
+++..++ +..|+|+|||..|.+...=. ....+...+.++++.++..||+|||.+ +||||||||+|+|++++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~----d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPP----DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSD 246 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCC----CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCC
Confidence 9999876 46899999999887754322 223389999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceeeccCC----cceeeeccccccccccccccCCC----CCcchhhHHHHHHHHHHHhCCCCCCCCcccc
Q 007073 435 FEAVVGDFGLAKLVDVRK----TNVTTQVRGTMGHIAPEYLSTGK----SSERTDVFGYGIMLLELVTGQRAIDFSRLEE 506 (619)
Q Consensus 435 ~~~kl~DfGla~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~ 506 (619)
+++||+|||.+....... .......+||+.|+|||...++. .+.+.||||+||+||.|+.|+.||-....
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~-- 324 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE-- 324 (576)
T ss_pred CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--
Confidence 999999999998662221 11122367999999999987743 36789999999999999999999953221
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.. ....++...+.-...++..+.+.+|+.+++.+||++|.+..+|....--
T Consensus 325 ------~~---------l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 325 ------LE---------LFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred ------HH---------HHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 11 1223333333333344566889999999999999999999998765543
No 91
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=305.04 Aligned_cols=263 Identities=23% Similarity=0.270 Sum_probs=201.5
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcch-HHHHHHHHHHHHHccCCCccceeeeeeC--CCcceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGG-DAAFQREVEMISVAVHRNLLRLIGFCTT--PTERLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv 369 (619)
++|+..+.|++|.||.||+|+++ +++.||+|+++-.....+ --.-.+|+.++.+.+|||||.+-.+... -+..++|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45777899999999999999965 788999999974332222 2356799999999999999999887754 4679999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
||||+. +|...++... .++...+++-+..|+.+|++|||+. .|+||||||+|+|+++.|.+||+|||+|+.++
T Consensus 156 Me~~Eh-DLksl~d~m~---q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK---QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHHHh-hHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 999987 8888887644 4588889999999999999999999 89999999999999999999999999999886
Q ss_pred cCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--cc--
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE--KR-- 524 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 524 (619)
... ...+..+-|..|.|||.+.+. .|+++.|+||+|||+.||+++++.|...+...+-+ ..+..+..+ ..
T Consensus 229 sp~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~----~If~llGtPte~iwp 303 (419)
T KOG0663|consen 229 SPL-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLD----KIFKLLGTPSEAIWP 303 (419)
T ss_pred CCc-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHH----HHHHHhCCCccccCC
Confidence 543 335556679999999998875 59999999999999999999999887644322111 111111000 00
Q ss_pred ------------cchhccccccCCCCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 ------------LDAIVDRNLNKNYNIQ-EVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ------------~~~~~~~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........++..+... ....-++|+...+..||.+|-|++|.++
T Consensus 304 g~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 304 GYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0000111111222111 3466789999999999999999999874
No 92
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-39 Score=331.36 Aligned_cols=247 Identities=24% Similarity=0.309 Sum_probs=205.9
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
-|..++.||.|+.|.|-.|++ .+|+.+|||.+.+.. +........+|+.+|+.+.|||++++++++.+..+.|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 366788999999999999996 589999999997542 23345667899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|-|.+++....+ +...+..+++.||..|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|.+...+
T Consensus 93 yv~gGELFdylv~kG~----l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKGP----LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred ecCCchhHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 9999999999987443 88899999999999999999999 9999999999999999999999999999875443
Q ss_pred CcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
. .....+|.+.|.|||++.+.+| +.++||||.|||+|.|+||+.||+... -..+...+++ +. .
T Consensus 166 k--lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-----ir~LLlKV~~---G~-f----- 229 (786)
T KOG0588|consen 166 K--LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-----IRVLLLKVQR---GV-F----- 229 (786)
T ss_pred c--cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-----HHHHHHHHHc---Cc-c-----
Confidence 3 2345679999999999999998 689999999999999999999997322 1112222211 10 0
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
+.+...+.+..+|+.+|+..||+.|.|++||++.
T Consensus 230 -----~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 -----EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -----cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 0122334678999999999999999999999864
No 93
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=6.2e-38 Score=313.93 Aligned_cols=254 Identities=28% Similarity=0.400 Sum_probs=203.4
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
.++|.+.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+|++++++++. ....+++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 35688889999999999999998777789999876432 23567889999999999999999999875 4567899999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.++++... ...+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 82 MGKGSLLDFLKEGD--GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999997632 23478999999999999999999999 99999999999999999999999999998764332
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
........++..|+|||...+..++.++||||||+++|||+| |+.||...... ... .......
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~---~~~~~~~-------- 220 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR-----EVL---EQVERGY-------- 220 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHH---HHHHcCC--------
Confidence 222223346778999999998899999999999999999999 88888642211 111 1111100
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
........+..+.+++.+||+.+|++||++++|+++|+.
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 221 --RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 011122345678999999999999999999999999875
No 94
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=6.1e-38 Score=317.41 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=203.8
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCc----EEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.++|+..+.||+|+||+||+|.+. +|+ .||+|+++..........+.+|+.+++.+.|+||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 457888899999999999999853 444 48999987655555567889999999999999999999998754 567
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+++||+++|+|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.
T Consensus 85 l~~~~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK---DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 9999999999999987532 3488999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 448 VDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 448 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
........ .....++..|+|||...+..++.++|||||||++|||+| |..||+.... ........ ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~---~~~~- 229 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-----REIPDLLE---KGER- 229 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHH---CCCc-
Confidence 65332221 112234678999999998899999999999999999999 8888863221 11111111 1000
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
.......+.++.+++.+||+.||++||++.++++.|+.+.
T Consensus 230 ---------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 230 ---------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA 269 (279)
T ss_pred ---------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 0112233457889999999999999999999999987753
No 95
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.1e-38 Score=320.26 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=207.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
..++|.+.+.||+|+||.||+|... ++..||+|.+...........+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 4567888999999999999999864 2468999998654444455678899999999999999999999999999
Q ss_pred ceeEecccccchhhhhhcccCCC------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEE
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPG------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVV 439 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 439 (619)
.++||||+++|+|.+++...... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEE
Confidence 99999999999999998754322 23478889999999999999999999 9999999999999999999999
Q ss_pred cccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHH
Q 007073 440 GDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 440 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
+|||+++....... .......++..|+|||.+.+..++.++|||||||++||++| |+.||...... ... .
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-----~~~---~ 232 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-----EVL---K 232 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-----HHH---H
Confidence 99999876543322 12223346789999999988889999999999999999998 88888532211 111 1
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
... ..... ..+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 233 ~~~-~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 233 FVI-DGGHL---------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHh-cCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111 11100 1112225688999999999999999999999998863
No 96
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.5e-38 Score=316.05 Aligned_cols=261 Identities=22% Similarity=0.361 Sum_probs=210.2
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||.||+|.. .+|+.+|||.+.... .......+.+|+.+++.++|+||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677889999999999999996 479999999876432 2233467889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.........+++.....++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998876444455689999999999999999999999 999999999999999999999999999886643
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.... .....|+..|+|||.+.+..++.++||||||+++|||++|..||...... .......... ...
T Consensus 159 ~~~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~------~~~ 225 (267)
T cd08229 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQ------CDY 225 (267)
T ss_pred CCcc-cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch------HHHHhhhhhc------CCC
Confidence 3221 22345889999999999888999999999999999999999998532211 1111111110 001
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+ .......+..+.+++.+||+.+|++|||+.+|++.++++
T Consensus 226 ~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 226 P---PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred C---CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1 111223456889999999999999999999999998764
No 97
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.6e-38 Score=345.27 Aligned_cols=259 Identities=22% Similarity=0.272 Sum_probs=206.6
Q ss_pred HHHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC---
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT--- 364 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--- 364 (619)
....++|.+.+.||+|+||+||+|.. .+|+.||||++.... +......+.+|+..+..++|+|++++++.+....
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34557899999999999999999985 479999999986432 3344567889999999999999999887765432
Q ss_pred -----cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEE
Q 007073 365 -----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVV 439 (619)
Q Consensus 365 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 439 (619)
..++||||+++|+|.+++.........++......++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 25799999999999999976554456689999999999999999999999 9999999999999999999999
Q ss_pred cccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 440 GDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 440 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ..+..
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~--------~~~~~ 256 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME--------EVMHK 256 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHH
Confidence 99999987643221 2233456999999999999999999999999999999999999999643211 11111
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
... +.. ...+...+.++.+++.+||+.||++||++.++++.
T Consensus 257 ~~~-~~~---------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 TLA-GRY---------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred Hhc-CCC---------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 111 000 01122334678999999999999999999998753
No 98
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=7.5e-38 Score=312.81 Aligned_cols=246 Identities=25% Similarity=0.377 Sum_probs=195.9
Q ss_pred ccccCCCceEEEEEeC---CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccc
Q 007073 301 VLGQGGFGKVYRGVLA---DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
.||+|+||.||+|.++ ++..+|+|+++... .....+.+..|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 57899999986432 2334578899999999999999999999875 45678999999999
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCccee
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 456 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 456 (619)
+|.+++... ..+++..+.+++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQKN----KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 999998653 2488899999999999999999999 999999999999999999999999999987654332211
Q ss_pred --eeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccccc
Q 007073 457 --TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 457 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
....++..|+|||.+....++.++|||||||++|||+| |+.||..... . ...........
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~---~~~~~i~~~~~--------- 216 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-----N---EVTQMIESGER--------- 216 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----H---HHHHHHHCCCC---------
Confidence 12234578999999988889999999999999999998 9999864221 1 11111111110
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
...+...+.++.+++.+||+.||++||++.+|.+.|+.
T Consensus 217 -~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 217 -MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred -CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 11122334678999999999999999999999999976
No 99
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3e-38 Score=319.88 Aligned_cols=244 Identities=25% Similarity=0.314 Sum_probs=193.9
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchh
Q 007073 302 LGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSV 378 (619)
Q Consensus 302 lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 378 (619)
||+|+||+||++... +|+.||+|.+..... ....+.+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999965 789999999864321 22345678899999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeee
Q 007073 379 AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ 458 (619)
Q Consensus 379 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 458 (619)
.+.+.........+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 988865444445689999999999999999999999 999999999999999999999999999986643322 2234
Q ss_pred ccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCC
Q 007073 459 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYN 538 (619)
Q Consensus 459 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 538 (619)
..||+.|+|||.+.+..++.++|||||||++|||+||+.||........ ....... +.... ...+
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~----~~~~~~~---------~~~~~--~~~~ 221 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQR---------ILNDS--VTYP 221 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh----HHHHHHh---------hcccC--CCCc
Confidence 5689999999999999999999999999999999999999964321110 0001111 11110 1122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHH
Q 007073 539 IQEVETMIQVALLCTQASPEDRPAMS 564 (619)
Q Consensus 539 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ 564 (619)
...+..+.+++.+|++.||++||+++
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFR 247 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence 33456789999999999999999443
No 100
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5.1e-38 Score=319.55 Aligned_cols=258 Identities=25% Similarity=0.391 Sum_probs=204.9
Q ss_pred cCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
++|.+.+.||+|+||.||++... ++..+|+|.+... .......+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 56888899999999999999842 3456899988643 2344667999999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCC---------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 368 LVYPFMQNLSVAYRLREIKP---------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~---------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
+||||+++++|.+++..... ....+++..+..++.|++.||+|||++ +++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 99999999999999875432 123489999999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHH
Q 007073 439 VGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 439 l~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 516 (619)
|+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||+| |..||...... ...
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--------~~~ 232 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------EVI 232 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHH
Confidence 9999999865332211 1122345778999999998899999999999999999999 88888543211 111
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..... +.... .....+..+.+++.+||+.+|.+|||+.++.+.|+++
T Consensus 233 ~~i~~-~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 233 ECITQ-GRVLQ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred HHHHc-CCcCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 11111 11000 0112235789999999999999999999999999875
No 101
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-38 Score=322.53 Aligned_cols=263 Identities=27% Similarity=0.405 Sum_probs=208.6
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC--------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeee
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFC 360 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~ 360 (619)
....++|.+.+.||+|+||.||+|.+. ++..||+|.+.........+.+.+|+.+++.+ +||||+++++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 345677888999999999999999741 34579999886544444567889999999999 799999999999
Q ss_pred eCCCcceeEecccccchhhhhhcccCCC------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007073 361 TTPTERLLVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 428 (619)
Q Consensus 361 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 428 (619)
......++||||+++|+|.+++...... ...+++..+..++.|++.||+|||++ +++||||||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 167 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARN 167 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccce
Confidence 9999999999999999999999764321 23578889999999999999999999 99999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccc
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEE 506 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~ 506 (619)
|++++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||+| |..||.....
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-- 245 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-- 245 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--
Confidence 999999999999999998764332221 222345678999999998889999999999999999999 7777753221
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.+........... ..+...+..+.+++.+||+.+|++||++.++++.|++.
T Consensus 246 ------~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 246 ------EELFKLLKEGHRM----------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred ------HHHHHHHHcCCcC----------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 1122222111110 11223346789999999999999999999999999763
No 102
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=6.7e-38 Score=320.14 Aligned_cols=257 Identities=25% Similarity=0.405 Sum_probs=202.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCc--EEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGT--KVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~--~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 369 (619)
++|++.+.||+|+||.||+|..+ ++. .+++|.++........+.+.+|+.+++++ +||||+++++++......++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 46888899999999999999975 333 47888887544444567789999999999 799999999999998899999
Q ss_pred ecccccchhhhhhcccCC------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 007073 370 YPFMQNLSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEA 437 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 437 (619)
+||+++++|.++++.... ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 999999999999965321 113488899999999999999999999 99999999999999999999
Q ss_pred EEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHH
Q 007073 438 VVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 438 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 516 (619)
||+|||++...... ........+..|+|||.+.+..++.++|||||||++|||+| |..||...... +..
T Consensus 159 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~--------~~~ 228 (297)
T cd05089 159 KIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA--------ELY 228 (297)
T ss_pred EECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHH
Confidence 99999998643211 11111223557999999998899999999999999999998 99998643211 111
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...... .....+...+..+.+++.+||+.+|.+||++.++++.|+..
T Consensus 229 ~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 229 EKLPQG----------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred HHHhcC----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111110 01111222345789999999999999999999999998764
No 103
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.9e-38 Score=325.06 Aligned_cols=244 Identities=21% Similarity=0.223 Sum_probs=195.4
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEeccC--CCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchh
Q 007073 302 LGQGGFGKVYRGVLA-DGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSV 378 (619)
Q Consensus 302 lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 378 (619)
||+|+||.||+|... +++.||+|.+... ........+.+|+.++++++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999975 5889999998642 1233456788999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeee
Q 007073 379 AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ 458 (619)
Q Consensus 379 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 458 (619)
.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 152 (312)
T cd05585 81 FHHLQRE----GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNT 152 (312)
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccc
Confidence 9988753 2388899999999999999999999 99999999999999999999999999997543222 22334
Q ss_pred ccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCC
Q 007073 459 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYN 538 (619)
Q Consensus 459 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 538 (619)
..||+.|+|||.+.+..++.++|||||||++|||+||+.||..... ......... .. ..++
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~--------~~~~~~~~~---------~~--~~~~ 213 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV--------NEMYRKILQ---------EP--LRFP 213 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH--------HHHHHHHHc---------CC--CCCC
Confidence 5699999999999999999999999999999999999999964321 111111111 00 0112
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 539 IQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 539 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
......+.+++.+||+.||++||++..+.+.|+.
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 2334578899999999999999875554444443
No 104
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.4e-38 Score=312.50 Aligned_cols=247 Identities=25% Similarity=0.359 Sum_probs=196.2
Q ss_pred ccccCCCceEEEEEeC---CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccch
Q 007073 301 VLGQGGFGKVYRGVLA---DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLS 377 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 377 (619)
.||+|+||.||+|.+. ++..||+|++.........+.|.+|+.++++++|+||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999864 356799999875544445577999999999999999999999885 456789999999999
Q ss_pred hhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceee
Q 007073 378 VAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT 457 (619)
Q Consensus 378 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 457 (619)
|.+++... ...+++..+.+++.|++.||+|||++ +++||||||+||+++.++.+||+|||++............
T Consensus 81 L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 81 LNKFLSGK---KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred HHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 99988643 23488999999999999999999999 9999999999999999999999999999865433322211
Q ss_pred --eccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcccccc
Q 007073 458 --QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLN 534 (619)
Q Consensus 458 --~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 534 (619)
...++..|+|||.+.+..++.++|||||||++||+++ |..||...... +......... .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~----------~ 216 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------EVMSFIEQGK----------R 216 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCC----------C
Confidence 1223578999999988889999999999999999996 99998643211 1111111111 1
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 535 KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 535 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
...+...+.++.+++.+||+.+|++||++.+|.+.|+.
T Consensus 217 ~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 217 LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 11223335688899999999999999999999999876
No 105
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.7e-38 Score=328.36 Aligned_cols=252 Identities=22% Similarity=0.251 Sum_probs=197.5
Q ss_pred CCcccCccccCCCceEEEEEe----CCCcEEEEEEeccCC---CcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFE---SPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTER 366 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~----~~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~ 366 (619)
+|++.+.||+|+||+||++.. .+|+.||+|++.+.. .....+.+..|+.++..++ |+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999985 358899999986421 2223456788999999995 89999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++|+|.+++... ..+++.....++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR----DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 9999999999999988753 2378899999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
..............||+.|+|||.+.+. .++.++|||||||++|||+||+.||........ ..........
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~~~~~~~~---- 225 (332)
T cd05614 154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT----QSEVSRRILK---- 225 (332)
T ss_pred cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC----HHHHHHHHhc----
Confidence 6544333333445799999999999765 478999999999999999999999964322111 0111111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
.++ ..+......+.+++.+|++.||++|| +++++++
T Consensus 226 ---~~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 226 ---CDP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ---CCC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 011 11222345788999999999999999 5556653
No 106
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.2e-38 Score=322.35 Aligned_cols=260 Identities=26% Similarity=0.366 Sum_probs=206.8
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTP 363 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 363 (619)
...++|...+.||+|+||.||+|... ++..||||+++........+.+.+|+++++++ +||||+++++++...
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 45567889999999999999999741 35589999987544444567789999999999 799999999999999
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
+..++||||+++|+|.++++.... ..+++.+...++.|++.||+|||++ +|+|+||||+||+++.++.++++|||
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCc
Confidence 999999999999999999875332 3379999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhh
Q 007073 444 LAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 444 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
+++........ ......++..|+|||.+.+..++.++|||||||++|||+| |+.||....... .. .....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~----~~----~~~~~ 258 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS----KF----YKLIK 258 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH----HH----HHHHH
Confidence 99865433221 1222345778999999999999999999999999999998 999986432110 01 11111
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.+. ....+...+..+.+++.+|++.+|++|||+.++++.|++
T Consensus 259 ~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 259 EGY---------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred cCC---------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 110 001111223578999999999999999999999999976
No 107
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=8.1e-38 Score=319.24 Aligned_cols=265 Identities=20% Similarity=0.337 Sum_probs=202.4
Q ss_pred hcCCcccCccccCCCceEEEEEeCC---------------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCcccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD---------------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLI 357 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~---------------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~ 357 (619)
.++|++.+.||+|+||.||++...+ ...||+|.++..........|.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3578889999999999999987642 2358999987654455567899999999999999999999
Q ss_pred eeeeCCCcceeEecccccchhhhhhcccCC--------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 007073 358 GFCTTPTERLLVYPFMQNLSVAYRLREIKP--------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANV 429 (619)
Q Consensus 358 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 429 (619)
+++...+..++||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 999999999999999999999999864321 112368889999999999999999999 999999999999
Q ss_pred EeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCcccc
Q 007073 430 LLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT--GQRAIDFSRLEE 506 (619)
Q Consensus 430 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt--g~~p~~~~~~~~ 506 (619)
++++++.+||+|||++......... ......++..|+|||.+.++.++.++|||||||++|||+| |..||......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~- 239 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE- 239 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH-
Confidence 9999999999999999765332211 1122345678999999998899999999999999999998 45565432211
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
................. ....+...+..+.+++.+||+.+|++||++.+|++.|+
T Consensus 240 ----~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 ----QVIENTGEFFRNQGRQI------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ----HHHHHHHHhhhhccccc------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11111111111100000 00011123458999999999999999999999999886
No 108
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.4e-38 Score=341.65 Aligned_cols=252 Identities=17% Similarity=0.232 Sum_probs=202.9
Q ss_pred CCcccCccccCCCceEEEEEeC-C-CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-D-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~-g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
.|.+.+.||+|+||.||+|... + +..||+|.+.. ........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~-~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVML-NDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEccc-CCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 4888999999999999999854 3 67888887643 2333445678899999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++|+|.+++.........+++.....++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 999999998875444445688899999999999999999999 99999999999999999999999999998764332
Q ss_pred c-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 453 T-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 453 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
. .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ......... ..
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~--------~~~~~~~~~-~~------ 288 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR--------EIMQQVLYG-KY------ 288 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhC-CC------
Confidence 2 1233456999999999999999999999999999999999999998642210 111111110 00
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+...+..+.+++.+||+.+|++||++.+++.
T Consensus 289 ---~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 289 ---DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ---CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0111223457899999999999999999999874
No 109
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5.5e-38 Score=326.84 Aligned_cols=261 Identities=20% Similarity=0.334 Sum_probs=194.5
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC-----cce
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-----ERL 367 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 367 (619)
+|++.+.||+|+||.||+|... +|..||||++.... .......+.+|++++++++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778899999999999999964 68999999986432 2334457889999999999999999999885432 468
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+. ++|.+++... ..+++..+..++.|+++||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKAN----DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHhc----ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999996 5788877643 2388999999999999999999999 999999999999999999999999999986
Q ss_pred eccCCc--ceeeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh--
Q 007073 448 VDVRKT--NVTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER-- 521 (619)
Q Consensus 448 ~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 521 (619)
...... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... ....+.....
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~-----~~~~~~~~~~~~ 227 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH-----QLDLITDLLGTP 227 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH-----HHHHHHHHhCCC
Confidence 532221 11234568999999999865 678999999999999999999999996432110 0000000000
Q ss_pred ---------hcccchhc---cccccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 ---------EKRLDAIV---DRNLNKNY---NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 ---------~~~~~~~~---~~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.......+ ........ .+.....+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 228 SPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred CHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000000 00000000 0112356789999999999999999999985
No 110
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1e-37 Score=313.72 Aligned_cols=256 Identities=26% Similarity=0.401 Sum_probs=205.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..+|.+.+.||+|+||.||+|.+. .+..+|+|.++........+.|..|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 356888899999999999999863 2347999998754444456789999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++++|.+++.... ..+++.+...++.|++.|++|||+. +++||||||+||+++.++.++++|||++...
T Consensus 83 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 83 VTEYMENGSLDAFLRKHD---GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 999999999999997532 3478899999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeee--ccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 449 DVRKTNVTTQ--VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 449 ~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
.......... ..++..|+|||.+.+..++.++||||||+++||+++ |+.||...... +..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~~~- 227 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--------DVIKAIEEGYR- 227 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--------HHHHHHhCCCc-
Confidence 5433222221 223568999999998899999999999999999887 99998532211 11111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.......+..+.+++.+|++.+|++||++.++++.|++
T Consensus 228 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 228 ---------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 01122234678999999999999999999999999976
No 111
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=7.7e-38 Score=313.27 Aligned_cols=257 Identities=27% Similarity=0.407 Sum_probs=208.1
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
...++|.+.+.||+|+||.||+|..++++.||||.+.... ...+++.+|+.++++++|+||+++++++......++||
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc--cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 3567899999999999999999998888899999987432 34577899999999999999999999999888999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.... ...+++..+..++.|++.|+.|||++ +++|+||||+||++++++.+||+|||.+.....
T Consensus 81 e~~~~~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 81 EYMSKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred eccCCCCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 9999999999997643 23488999999999999999999999 999999999999999999999999999987653
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
..........++..|+|||.+.+..++.++||||||+++|||+| |+.||..... .. .........
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~---~~~~~~~~~------ 221 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-----RE---VLEQVERGY------ 221 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HH---HHHHHHcCC------
Confidence 22222222335678999999998889999999999999999999 9999853211 11 111111100
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
....+...+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 222 ----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 ----RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 001111224578999999999999999999999999875
No 112
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.6e-37 Score=317.16 Aligned_cols=265 Identities=23% Similarity=0.358 Sum_probs=206.5
Q ss_pred hcCCcccCccccCCCceEEEEEeCC-----------------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD-----------------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 355 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~-----------------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 355 (619)
..+|++.+.||+|+||.||+|...+ +..||+|.+.........+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578889999999999999998642 24689999876555556678999999999999999999
Q ss_pred eeeeeeCCCcceeEecccccchhhhhhcccCC-------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007073 356 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP-------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 428 (619)
Q Consensus 356 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 428 (619)
+++++......++++||+++++|.+++..... ....+++.....++.|++.||+|||+. +++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 99999999999999999999999999876442 123589999999999999999999999 99999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCccc
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT--GQRAIDFSRLE 505 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt--g~~p~~~~~~~ 505 (619)
|+++.++.++|+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-- 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence 99999999999999999865433221 2223446778999999988899999999999999999998 566664221
Q ss_pred cccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 506 EEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
.................... .......+.++.+++.+|++.+|++|||+.+|++.|+
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 239 ---DQQVIENAGHFFRDDGRQIY------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred ---hHHHHHHHHhcccccccccc------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 11111111111100000000 0112223468999999999999999999999999886
No 113
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4e-38 Score=327.33 Aligned_cols=247 Identities=23% Similarity=0.223 Sum_probs=199.3
Q ss_pred HhcCCcccCccccCCCceEEEEEeCC--CcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLAD--GTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~--g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
..++|.+.+.||+|+||.||+|.+.+ +..||+|++.... .....+.+.+|+.+++.++||||+++++++......+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 34578889999999999999998643 3689999986422 2334567889999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 108 lv~Ey~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNK----RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKV 180 (340)
T ss_pred EEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCee
Confidence 9999999999999987532 388889999999999999999999 999999999999999999999999999986
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...... ........
T Consensus 181 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--------~~~~~i~~------ 242 (340)
T PTZ00426 181 VDTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--------LIYQKILE------ 242 (340)
T ss_pred cCCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--------HHHHHHhc------
Confidence 5432 22456899999999999888999999999999999999999999643211 11111111
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
... .++......+.+++.+|++.||++|+ +++++++
T Consensus 243 ---~~~--~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 243 ---GII--YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ---CCC--CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 000 01112235678999999999999995 7777664
No 114
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5e-38 Score=322.65 Aligned_cols=261 Identities=29% Similarity=0.396 Sum_probs=205.9
Q ss_pred HhcCCcccCccccCCCceEEEEEeC--------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT 362 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 362 (619)
..++|.+.+.||+|+||.||++... ++..+|+|.+...........+..|+++++.+ +||||+++++++..
T Consensus 16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 3467899999999999999999852 23579999987544444556788999999999 79999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCC------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 430 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 430 (619)
....++||||+++|+|.+++..... ....+++.++.+++.|++.||+|||+. +++||||||+||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 172 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 172 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheE
Confidence 9999999999999999999976432 123488999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccccc
Q 007073 431 LDEDFEAVVGDFGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEED 508 (619)
Q Consensus 431 l~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~ 508 (619)
++.++.+||+|||.++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~--- 249 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--- 249 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH---
Confidence 9999999999999987654322111 112234568999999998889999999999999999998 88887532211
Q ss_pred chhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 509 DVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+........ . ....+.....++.+++.+||+.+|++||++.+|++.|+..
T Consensus 250 -----~~~~~~~~~-~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 250 -----ELFKLLKEG-H---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred -----HHHHHHHcC-C---------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 111111111 0 0111223346888999999999999999999999999873
No 115
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.2e-38 Score=324.98 Aligned_cols=246 Identities=22% Similarity=0.259 Sum_probs=192.6
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
++||+|+||.||+|... +++.||+|+++... .......+..|..++..+ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999965 68899999997432 223345678899999888 699999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~ 152 (329)
T cd05588 81 GDLMFHMQRQ----RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDT 152 (329)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC-CCc
Confidence 9998888653 3489999999999999999999999 9999999999999999999999999998743211 122
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||+.............++..........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 222 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI---------- 222 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC----------
Confidence 3345689999999999999999999999999999999999999975332221111111111111111111
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
..+...+..+.+++.+|++.||.+||++
T Consensus 223 ~~p~~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 223 RIPRSLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 0112234578899999999999999983
No 116
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=5.9e-38 Score=321.49 Aligned_cols=256 Identities=25% Similarity=0.428 Sum_probs=201.7
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCc--EEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGT--KVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~--~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 369 (619)
++|++.+.||+|+||.||+|.++ +|. .+|+|.++..........+.+|++++.++ +|+||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 56788899999999999999974 454 46888776544445567889999999999 899999999999999999999
Q ss_pred ecccccchhhhhhcccCC------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 007073 370 YPFMQNLSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEA 437 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 437 (619)
+||+++++|.++++.... ....+++..++.++.|++.|++|||++ +++||||||+||+++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 999999999999875321 123588999999999999999999999 99999999999999999999
Q ss_pred EEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHH
Q 007073 438 VVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 438 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 516 (619)
||+|||++...... .......++..|+|||.+.+..++.++|||||||++|||+| |..||...... +..
T Consensus 164 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~ 233 (303)
T cd05088 164 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELY 233 (303)
T ss_pred EeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--------HHH
Confidence 99999998643211 11111234668999999988889999999999999999998 99998532211 111
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
....... ....+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 234 ~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~ 279 (303)
T cd05088 234 EKLPQGY----------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 279 (303)
T ss_pred HHHhcCC----------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1111100 001111234578999999999999999999999999876
No 117
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.3e-38 Score=318.13 Aligned_cols=258 Identities=24% Similarity=0.401 Sum_probs=205.2
Q ss_pred cCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.+|.+.+.||+|+||.||+|... ++..+++|.+... .....+.+.+|++++++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc-cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 45777899999999999999842 3567899987542 2334567899999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCC------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 368 LVYPFMQNLSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
+||||+++++|.+++..... ....+++..+.+++.|++.|++|||++ +|+||||||+||+++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 99999999999999975432 123488999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007073 436 EAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 513 (619)
.++|+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-------- 232 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT-------- 232 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------
Confidence 999999999976543221 11223446788999999999999999999999999999999 99998543211
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....... .+... ......+..+.+++.+||+.+|++||++.+|+++|++.
T Consensus 233 ~~~~~~~-~~~~~---------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 233 EVIECIT-QGRVL---------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred HHHHHHh-CCCCC---------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 1111111 11111 01122345789999999999999999999999999885
No 118
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=8.4e-38 Score=314.35 Aligned_cols=257 Identities=25% Similarity=0.427 Sum_probs=205.4
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CC---cEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DG---TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g---~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
.++|+..+.||+|+||.||+|... ++ ..+|+|.+.........+.+.+|++++++++|+|++++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 457888899999999999999974 33 37999988654444456788999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 84 ITEYMENGALDKYLRDHD---GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 999999999999987532 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceee--eccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 449 DVRKTNVTT--QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 449 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
......... ....+..|+|||++.+..++.++|||||||++|||+| |+.||..... .+..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--------~~~~~~i~~~~~- 228 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--------HEVMKAINDGFR- 228 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--------HHHHHHHhcCCC-
Confidence 433222211 1223457999999998899999999999999999998 9999853221 111111111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.......+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 229 ---------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 ---------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111122346789999999999999999999999999763
No 119
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.6e-37 Score=317.11 Aligned_cols=266 Identities=21% Similarity=0.343 Sum_probs=204.0
Q ss_pred hcCCcccCccccCCCceEEEEEeC-----------------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-----------------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 355 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-----------------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 355 (619)
.++|++.+.||+|+||.||++... ++..||+|+++..........|.+|+++++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 456889999999999999998642 234699999875544455678999999999999999999
Q ss_pred eeeeeeCCCcceeEecccccchhhhhhcccCCC-------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007073 356 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPG-------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 428 (619)
Q Consensus 356 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 428 (619)
+++++...+..++||||+++|+|.+++...... ...+++.....++.|++.||+|||+. +++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 999999999999999999999999998764322 13477889999999999999999999 99999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCccc
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT--GQRAIDFSRLE 505 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt--g~~p~~~~~~~ 505 (619)
|+++.++.++|+|||+++.+....... .....++..|+|||...++.++.++|||||||++|||+| |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 999999999999999998654322211 122334678999999888899999999999999999998 66776432111
Q ss_pred cccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 506 EEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
................... ..+...+..+.+++.+||+.||++||++.+|.+.|+.
T Consensus 241 -----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 -----QVIENTGEFFRDQGRQVYL------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -----HHHHHHHHHHhhccccccC------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1111111111000000000 0112233678999999999999999999999998863
No 120
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1e-38 Score=333.97 Aligned_cols=253 Identities=24% Similarity=0.277 Sum_probs=203.8
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|.+.+.||+|+||+||+|... +|+.||||++.... .......+..|++++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999975 68999999986432 2244567889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++... ..++......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 999999999999764 3488899999999999999999998 999999999999999999999999999986643
Q ss_pred CC----------------------------cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 451 RK----------------------------TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 451 ~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
.. ........||+.|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 32 11223456899999999999999999999999999999999999999643
Q ss_pred ccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 007073 503 RLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA-MSEVVRM 569 (619)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~ 569 (619)
... .......... ..+........+..+.+++.+|++ +|.+||+ +.++++.
T Consensus 234 ~~~--------~~~~~i~~~~-------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQ--------ETYNKIINWK-------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHH--------HHHHHHhccC-------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 311 1111111100 000000011134678899999997 9999999 9999863
No 121
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.2e-38 Score=324.92 Aligned_cols=246 Identities=22% Similarity=0.256 Sum_probs=191.4
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||.||+|... +++.||+|.++... .......+..|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 67899999987532 223445677888888776 799999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~ 152 (329)
T cd05618 81 GDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DT 152 (329)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Cc
Confidence 9998887653 2488899999999999999999999 99999999999999999999999999987532211 12
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||...............+..........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~---------- 222 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---------- 222 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----------
Confidence 2345689999999999999999999999999999999999999964222111111111111111111110
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
..+......+.+++.+|++.||++||++
T Consensus 223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 1122334578899999999999999984
No 122
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.5e-37 Score=313.18 Aligned_cols=256 Identities=26% Similarity=0.377 Sum_probs=197.8
Q ss_pred CcccCccccCCCceEEEEEeCC-Cc--EEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC------Cc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLAD-GT--KVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------TE 365 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~~-g~--~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~ 365 (619)
|.+.+.||+|+||.||+|.+.+ +. .||+|.++... .....+.+..|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467899999999999999754 33 68999886432 334467889999999999999999999987432 24
Q ss_pred ceeEecccccchhhhhhcccC--CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIK--PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
.++++||+++|+|.+++.... .....+++.....++.|++.||+|||++ +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999998874322 2234588999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhh
Q 007073 444 LAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 444 la~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
+++.+....... .....+++.|+|||...+..++.++||||||+++|||++ |+.||..... . ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~---~~~~~~~~ 229 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-----S---EIYDYLRQ 229 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-----H---HHHHHHHc
Confidence 998764332211 122235678999999999999999999999999999999 7888853211 1 11111111
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.... ......+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus 230 ~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 230 GNRL----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CCCC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 1110 0112234568999999999999999999999999876
No 123
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=7.4e-38 Score=323.55 Aligned_cols=242 Identities=22% Similarity=0.249 Sum_probs=194.3
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
+.||+|+||.||++... +|+.||+|.++... .......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999964 68999999986432 2234456788999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCccee
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 456 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 456 (619)
+|..++... ..+++.....++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~ 152 (323)
T cd05595 81 ELFFHLSRE----RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATM 152 (323)
T ss_pred cHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Ccc
Confidence 998888653 2488999999999999999999999 99999999999999999999999999987532221 122
Q ss_pred eeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCC
Q 007073 457 TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKN 536 (619)
Q Consensus 457 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 536 (619)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ........ ... .
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~~~~---------~~~--~ 213 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILM---------EEI--R 213 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHhc---------CCC--C
Confidence 3456899999999999999999999999999999999999998643211 01111110 000 1
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 537 YNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 537 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
++...+.++.+++.+|++.||++|| ++.++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 1222345788999999999999998 7777764
No 124
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=7.3e-38 Score=318.38 Aligned_cols=260 Identities=25% Similarity=0.398 Sum_probs=206.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
..++|+..+.||+|+||.||+|... ++..||+|.+...........+.+|+.++++++||||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3467888999999999999999863 4678999998755444456779999999999999999999999999999
Q ss_pred ceeEecccccchhhhhhcccCC------------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 007073 366 RLLVYPFMQNLSVAYRLREIKP------------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAA 427 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~ 427 (619)
.++|+||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHh
Confidence 9999999999999999975321 123478888999999999999999999 9999999999
Q ss_pred cEEeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccc
Q 007073 428 NVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLE 505 (619)
Q Consensus 428 NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~ 505 (619)
||++++++.++|+|||++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999998765332211 1122234678999999998899999999999999999998 77787532111
Q ss_pred cccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 506 EEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
+....... +... ..+...+..+.+++.+|++.+|++|||+.|+++.|++
T Consensus 240 --------~~~~~~~~-~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 --------EVIYYVRD-GNVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --------HHHHHHhc-CCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11111111 1110 0112234678999999999999999999999999874
No 125
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.6e-37 Score=312.89 Aligned_cols=257 Identities=26% Similarity=0.385 Sum_probs=201.2
Q ss_pred CcccCccccCCCceEEEEEeCC----CcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc-----
Q 007073 296 FSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE----- 365 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 365 (619)
|.+.+.||+|+||.||+|.... +..||+|+++... .......+.+|+++++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4667899999999999999642 3679999987432 23345678999999999999999999998866554
Q ss_pred -ceeEecccccchhhhhhcccCC--CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 366 -RLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 366 -~~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
.++++||+++|+|..++..... ....+++.....++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 7899999999999998855322 224588999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHh
Q 007073 443 GLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 443 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
|+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||..... ... .....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-----~~~---~~~~~ 229 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-----HEI---YDYLR 229 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-----HHH---HHHHH
Confidence 9998764332221 112235678999999988889999999999999999999 8888753221 111 11111
Q ss_pred hhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 521 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.... ...+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus 230 ~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 HGNR----------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred cCCC----------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1100 111223446889999999999999999999999998763
No 126
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.7e-38 Score=326.44 Aligned_cols=243 Identities=23% Similarity=0.254 Sum_probs=195.8
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
+.||+|+||.||++... +|+.||+|++.... .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999964 68999999986432 2334567889999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCccee
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 456 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 456 (619)
+|..++... ..+++.....++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~ 152 (328)
T cd05593 81 ELFFHLSRE----RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATM 152 (328)
T ss_pred CHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc-cccc
Confidence 998888653 2488999999999999999999999 9999999999999999999999999998753222 1222
Q ss_pred eeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCC
Q 007073 457 TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKN 536 (619)
Q Consensus 457 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 536 (619)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ........ . +. .
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--------~~~~~~~~-~------~~----~ 213 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILM-E------DI----K 213 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--------HHHHHhcc-C------Cc----c
Confidence 3456999999999999999999999999999999999999999643211 11111100 0 00 1
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 007073 537 YNIQEVETMIQVALLCTQASPEDRP-----AMSEVVRM 569 (619)
Q Consensus 537 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 569 (619)
++.....++.+++.+|++.||++|| ++.++++.
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1222345788999999999999997 78888753
No 127
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.9e-38 Score=333.77 Aligned_cols=257 Identities=21% Similarity=0.253 Sum_probs=202.6
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
....++|++.+.||+|+||.||++... +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++..+...
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 345678999999999999999999975 68899999986421 223345678899999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++|+|.+++... .++......++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~ 190 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY-----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEecccee
Confidence 9999999999999988652 267778888999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTG----KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
..............||+.|+|||.+.+. .++.++|||||||++|||+||+.||...... .........
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~~ 262 (370)
T cd05596 191 KMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMDH 262 (370)
T ss_pred eccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH--------HHHHHHHcC
Confidence 7644332223345799999999998653 4789999999999999999999999643211 111111110
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPED--RPAMSEVVRM 569 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 569 (619)
.. .+........+..+.+++.+|++.+|++ ||++.++++.
T Consensus 263 ~~-------~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 263 KN-------SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CC-------cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 00 0000011123467889999999999988 9999998753
No 128
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.2e-37 Score=315.36 Aligned_cols=252 Identities=22% Similarity=0.290 Sum_probs=199.4
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|+..++||+|+||.||+|.. .+++.||+|.+...........+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3577789999999999999996 478999999986544444567789999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|..+. .+++.....++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 9999886542 267788889999999999999999 9999999999999999999999999999865322
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
......|+..|+|||.+.+..++.++||||||+++|+|+||+.||.......... .......... +..
T Consensus 149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~---------~~~ 216 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-MPLQLLQCIV---------DED 216 (279)
T ss_pred --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-chHHHHHHHh---------ccC
Confidence 2233568999999999999899999999999999999999999986432211110 0011111110 000
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
...........++.+++.+|++.+|++||+++++++.
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 217 PPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000111234578999999999999999999999864
No 129
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-38 Score=338.99 Aligned_cols=263 Identities=22% Similarity=0.272 Sum_probs=215.2
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeCCC-cEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceee-eeeC----
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLADG-TKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIG-FCTT---- 362 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g-~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~-~~~~---- 362 (619)
.+...++++.++|.+|||+.||.|....+ ..||+|++.-. .........+|+++|+++. |+|||.+++ ....
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN 111 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence 34556778889999999999999998765 99999998654 5667788899999999998 999999999 3321
Q ss_pred --CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEc
Q 007073 363 --PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVG 440 (619)
Q Consensus 363 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 440 (619)
..+.+|.||||++|+|.+++....... |+..++++|+.|+++|+++||.. +|+|||||||.+||||+.+++.|||
T Consensus 112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~--lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLC 188 (738)
T KOG1989|consen 112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTR--LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLC 188 (738)
T ss_pred CceeEEEeehhhccCCcHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeC
Confidence 235789999999999999998765544 99999999999999999999986 7789999999999999999999999
Q ss_pred ccccceeeccCCccee--------eeccccccccccccc---cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc
Q 007073 441 DFGLAKLVDVRKTNVT--------TQVRGTMGHIAPEYL---STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD 509 (619)
Q Consensus 441 DfGla~~~~~~~~~~~--------~~~~gt~~y~aPE~~---~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~ 509 (619)
|||.|.-......... -...-|+-|.|||.+ .+..+++|+|||+|||+||-|+....||+...
T Consensus 189 DFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg------ 262 (738)
T KOG1989|consen 189 DFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG------ 262 (738)
T ss_pred cccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc------
Confidence 9999874322221100 012358999999976 56789999999999999999999999997432
Q ss_pred hhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCccc
Q 007073 510 VLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAE 577 (619)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 577 (619)
...|++....-...+.+...+.+||..||+.||++||++-+|+..+-.+.-.+
T Consensus 263 ---------------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 263 ---------------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ---------------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 12445555544445788899999999999999999999999999888765433
No 130
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-37 Score=321.14 Aligned_cols=263 Identities=29% Similarity=0.416 Sum_probs=206.4
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC--------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeee
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFC 360 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~ 360 (619)
....++|.+.+.||+|+||.||++... .+..+|+|.++..........+..|+++++++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 344567888999999999999999742 24579999987544444567788999999999 599999999999
Q ss_pred eCCCcceeEecccccchhhhhhcccCC------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007073 361 TTPTERLLVYPFMQNLSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 428 (619)
Q Consensus 361 ~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 428 (619)
......+++|||+++|+|.+++..... ....+++....+++.|++.||.|||++ +++||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 164 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARN 164 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccccee
Confidence 988889999999999999999976432 124588999999999999999999999 99999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccc
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEE 506 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~ 506 (619)
|+++.++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||+| |..||......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~- 243 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE- 243 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 999999999999999998654322211 112234567999999998899999999999999999999 88887532211
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
........... ...+...+.++.+++.+||+.+|++||++.++++.|++.
T Consensus 244 -------~~~~~~~~~~~----------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 244 -------ELFKLLREGHR----------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred -------HHHHHHHcCCC----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 11111111110 011222345788999999999999999999999999874
No 131
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=327.99 Aligned_cols=251 Identities=28% Similarity=0.397 Sum_probs=206.1
Q ss_pred cCCcccCccccCCCceEEEEEeC--CCc--EEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA--DGT--KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~--~g~--~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
+.....++||+|.||.|++|.|. +|+ .||||.++.........+|.+|+.+|.+++|||+++|||+..+ ....+|
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence 33445688999999999999985 344 5899999866555577899999999999999999999999987 778899
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+|..+.|+|.+.|+.. ....+-......++.|||.||.||..+ ++|||||.++|+|+-....|||+|||+.+-+.
T Consensus 189 ~ELaplGSLldrLrka--~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKA--KKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred hhhcccchHHHHHhhc--cccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccC
Confidence 9999999999999982 345588888999999999999999999 99999999999999999999999999999886
Q ss_pred cCCcce-ee-eccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 450 VRKTNV-TT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 450 ~~~~~~-~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
..+... +. ...-.+.|+|||.+..+.++.++|||+|||++|||+| |+.||..-. -.+..+.+...+++
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~--------g~qIL~~iD~~erL- 334 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR--------GIQILKNIDAGERL- 334 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC--------HHHHHHhccccccC-
Confidence 544332 22 1223568999999999999999999999999999999 788885422 11222222222222
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+..++++++++++.||..+|.+||||..|.+
T Consensus 335 ---------pRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 335 ---------PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred ---------CCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 235667889999999999999999999999973
No 132
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.9e-38 Score=325.74 Aligned_cols=263 Identities=27% Similarity=0.402 Sum_probs=202.5
Q ss_pred HHhcCCcccCccccCCCceEEEEEe------CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTP 363 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 363 (619)
...++|++.+.||+|+||.||+|.+ .+++.||||+++..........+.+|+.++.++ +||||+++++++...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 3456899999999999999999974 357899999997544444556788999999999 689999999988655
Q ss_pred -CcceeEecccccchhhhhhcccCC-------------------------------------------------------
Q 007073 364 -TERLLVYPFMQNLSVAYRLREIKP------------------------------------------------------- 387 (619)
Q Consensus 364 -~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 387 (619)
...+++|||+++|+|.++++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 457899999999999998864211
Q ss_pred --------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc-eeee
Q 007073 388 --------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQ 458 (619)
Q Consensus 388 --------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~ 458 (619)
....+++..+.+++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 012367888899999999999999999 9999999999999999999999999999865322211 1122
Q ss_pred ccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCC
Q 007073 459 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNY 537 (619)
Q Consensus 459 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 537 (619)
..++..|+|||.+.+..++.++||||||+++|||++ |..||....... .. .......... . .
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~---~~~~~~~~~~-~---------~ 303 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EF---CRRLKEGTRM-R---------A 303 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH----HH---HHHHhccCCC-C---------C
Confidence 345678999999988899999999999999999997 888886432110 01 1111111000 0 0
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 538 NIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 538 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+......+.+++..||+.+|++|||+.+|++.|+.+
T Consensus 304 ~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 304 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111234689999999999999999999999999864
No 133
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.2e-38 Score=326.66 Aligned_cols=253 Identities=18% Similarity=0.220 Sum_probs=201.9
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|.+.+.||+|+||+||++... +|+.||+|+++... .....+.+.+|+.+++.++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999965 68999999987432 2234567889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++.... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRYE---DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 9999999999987642 3488899999999999999999999 999999999999999999999999999987654
Q ss_pred CCcceeeecccccccccccccc------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLS------TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
..........||+.|+|||++. ...++.++|||||||++|||+||+.||...... ...........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~~~~~ 226 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA--------KTYNNIMNFQR 226 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH--------HHHHHHHcCCC
Confidence 4433334456899999999986 456789999999999999999999999643211 11111111111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... ......+..+.+++..|++ +|++||++.++++
T Consensus 227 ~~~~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 227 FLKF-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred ccCC-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0000 0011234578889999998 9999999998874
No 134
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=7.2e-38 Score=323.72 Aligned_cols=242 Identities=24% Similarity=0.297 Sum_probs=193.3
Q ss_pred CccccCCCceEEEEEe----CCCcEEEEEEeccCC---CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 300 NVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFE---SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~----~~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+.||+|+||.||++.. .+++.||||.++... .......+..|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999985 357899999986421 122345678899999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++|+|.+++... ..+.......++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLERE----GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 9999999988653 2367788888999999999999999 99999999999999999999999999987543222
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ........ ..
T Consensus 155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~--------~~~~~~~~---------~~ 216 (323)
T cd05584 155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK--------KTIDKILK---------GK 216 (323)
T ss_pred -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--------HHHHHHHc---------CC
Confidence 1223456899999999999888999999999999999999999999643211 11111111 10
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
. ..+......+.+++.+|++.+|++|| ++.++++
T Consensus 217 ~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 217 L--NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred C--CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 0 11222335788999999999999999 6777664
No 135
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.3e-37 Score=311.61 Aligned_cols=251 Identities=26% Similarity=0.438 Sum_probs=196.7
Q ss_pred CccccCCCceEEEEEeCC-Cc--EEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLAD-GT--KVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~-g~--~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
++||+|+||.||+|...+ |. .+|+|.++........+.+.+|++++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999753 43 46888887544445567889999999999 799999999999999999999999999
Q ss_pred chhhhhhcccCC------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 376 LSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 376 gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
|+|.+++..... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999875321 123478999999999999999999998 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
++....... .......+..|+|||++.+..++.++|||||||++|||+| |..||...... +........
T Consensus 158 l~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~~~~~ 227 (270)
T cd05047 158 LSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEKLPQG 227 (270)
T ss_pred Cccccchhh--hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--------HHHHHHhCC
Confidence 986322111 1111223567999999988889999999999999999997 99998532211 111111111
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
... .........+.+++.+||+.+|.+|||+.+++..|+.+
T Consensus 228 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 228 YRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CCC----------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 110 11112335788999999999999999999999999763
No 136
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.5e-38 Score=330.68 Aligned_cols=260 Identities=21% Similarity=0.263 Sum_probs=202.1
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC--CCcchHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
+++....++|++.+.||+|+||.||++... +++.||+|.+.+. ........+.+|+.+++.++||||+++++++..+
T Consensus 36 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (370)
T cd05621 36 RKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD 115 (370)
T ss_pred HhcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence 344556678999999999999999999975 5889999998642 1223345678999999999999999999999999
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
+..++||||+++|+|.+++... .++......++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG 187 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFG 187 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecc
Confidence 9999999999999999988642 267888899999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG----KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL 519 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 519 (619)
++...............||+.|+|||.+.+. .++.++||||+||++|||+||+.||...... ......
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--------~~~~~i 259 (370)
T cd05621 188 TCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--------GTYSKI 259 (370)
T ss_pred cceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--------HHHHHH
Confidence 9987653333233455799999999998654 3789999999999999999999999643211 111111
Q ss_pred hhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 007073 520 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPED--RPAMSEVVRM 569 (619)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 569 (619)
...... +........+..+.+++..|++.++.+ ||++.++++.
T Consensus 260 ~~~~~~-------~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 260 MDHKNS-------LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HhCCcc-------cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 111000 000011123456788899999865544 8899988764
No 137
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3e-37 Score=313.18 Aligned_cols=264 Identities=25% Similarity=0.358 Sum_probs=201.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC--Ccc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TER 366 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 366 (619)
.+|++.+.||+|+||+||++..+ ++..||+|.+... .....+.+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS-TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 46788899999999999999842 5789999998643 334457889999999999999999999987543 457
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++|+||+++++|.+++.... ..+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||+++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHR---ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred EEEEEecCCCCHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccc
Confidence 89999999999999986532 3488999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCccee--eeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccc-------cchhHHHHHH
Q 007073 447 LVDVRKTNVT--TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE-------DDVLLLDHVK 517 (619)
Q Consensus 447 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~-------~~~~~~~~~~ 517 (619)
.......... ....++..|+|||.+.+..++.++|||||||++|||++|..++........ ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 234 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH-- 234 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH--
Confidence 7643322211 112234569999999988999999999999999999998876542211000 00000000
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+.+.+............+..+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus 235 -------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 235 -------LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred -------HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0011111111111223346789999999999999999999999999864
No 138
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.8e-37 Score=310.66 Aligned_cols=256 Identities=24% Similarity=0.394 Sum_probs=205.8
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
...++|.+.+.||+|+||.||++...++..+|+|.++.. ......+.+|++++++++|+||+++++++.. ...+++|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 345788999999999999999999888889999988642 2245678999999999999999999999877 7789999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||.+.....
T Consensus 80 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 80 EFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EeCCCCcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 9999999999997643 33478889999999999999999998 999999999999999999999999999986643
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
..........++..|+|||++....++.++|+|||||++|+++| |+.||...... .. .........
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~---~~~~~~~~~----- 221 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EV---IRALERGYR----- 221 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-----HH---HHHHhCCCC-----
Confidence 32222223345678999999998889999999999999999999 88888632211 01 111111100
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.......+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 222 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 -----MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -----CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01112334578999999999999999999999999875
No 139
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-37 Score=310.77 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=201.9
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC----cchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES----PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
++|...+.||+|++|.||+|... ++++||+|.+..... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 56888999999999999999964 689999998864322 1123578899999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
|+||+++++|.+.+.... .++......++.|++.||+|||+. +++||||+|+||++++++.++|+|||+++..
T Consensus 82 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG----ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 999999999999887532 378888899999999999999999 9999999999999999999999999999865
Q ss_pred ccCCccee--eeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 449 DVRKTNVT--TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 449 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
........ ....|+..|+|||.+.+..++.++||||||+++|||++|+.||...... .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~---- 222 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM--------AAIFKIATQ---- 222 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH--------HHHHHHhcc----
Confidence 43222111 2345788999999999988999999999999999999999998532110 001111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
......+......+.+++.+||+.+|++|||+.++++.
T Consensus 223 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 223 -----PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 01111222344578899999999999999999999864
No 140
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.6e-37 Score=312.49 Aligned_cols=255 Identities=26% Similarity=0.412 Sum_probs=203.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CC---cEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DG---TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g---~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
..|.+.+.||+|+||.||+|... ++ ..||||.+...........|..|+.+++.++||||+++++++......++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 34778899999999999999965 33 369999987544455567899999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++.... ..+++..+..++.|++.|++|||++ +++|+||||+||+++.++.+||+|||++....
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 84 TEFMENGALDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EecCCCCcHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 99999999999987532 3478999999999999999999999 99999999999999999999999999987654
Q ss_pred cCCcce--eeecc--ccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 450 VRKTNV--TTQVR--GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 450 ~~~~~~--~~~~~--gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
...... ..... .+..|+|||.+.+..++.++|||||||++|||++ |..||..... ..... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~-----~~~~~---~i~~~~~ 229 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-----QDVIN---AIEQDYR 229 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH-----HHHHH---HHHcCCc
Confidence 322211 11111 2457999999999999999999999999999987 9999853221 11111 1111100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
...+.+.+..+.+++.+||+.+|++||++.+|+..|++
T Consensus 230 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 230 ----------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred ----------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11122334678899999999999999999999999876
No 141
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.4e-37 Score=310.19 Aligned_cols=255 Identities=28% Similarity=0.374 Sum_probs=193.4
Q ss_pred CccccCCCceEEEEEeCC---CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccc
Q 007073 300 NVLGQGGFGKVYRGVLAD---GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~---g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
+.||+|+||.||+|.+.+ +..+|+|.++..........+.+|+.++++++||||+++++++......++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998643 45799998875544445567889999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 377 SVAYRLREIKPG-EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 377 sL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
+|.++++..... ....++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 999999754322 23467778889999999999999999 99999999999999999999999999997543322211
Q ss_pred -eeeccccccccccccccCC-------CCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 456 -TTQVRGTMGHIAPEYLSTG-------KSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 456 -~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
.....++..|+|||++.+. .++.++||||||+++|||++ |+.||....... .... ... ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-----~~~~---~~~-~~~~ 228 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ-----VLTY---TVR-EQQL 228 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH-----HHHH---Hhh-cccC
Confidence 1234567889999998642 35789999999999999997 999986432111 0000 000 1111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
...++.+. ......+.+++..|| .+|++|||+.+|+..|+
T Consensus 229 ~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11111111 112346788999999 58999999999998874
No 142
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.9e-37 Score=308.27 Aligned_cols=250 Identities=30% Similarity=0.427 Sum_probs=204.7
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
.++|++.+.||+|+||.||+|... |+.||+|.+..... ..+.+.+|+.+++.++|+||+++++++......++||||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 457888899999999999999975 89999999875432 467889999999999999999999999988899999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.+||+|||.++......
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 82 MAKGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 999999999876432 3489999999999999999999999 99999999999999999999999999998663221
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
. ...++..|+|||.+.++.++.++||||||+++|||++ |..||...... .+..... ..
T Consensus 157 ~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~---~~--------- 215 (256)
T cd05039 157 D----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPHVE---KG--------- 215 (256)
T ss_pred c----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHh---cC---------
Confidence 1 2234668999999998899999999999999999998 99988543211 1111111 00
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.....+...+..+.+++.+||+.+|++||++.+++++|+.
T Consensus 216 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 216 -YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred -CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 0011122234678999999999999999999999999975
No 143
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.1e-37 Score=321.11 Aligned_cols=239 Identities=23% Similarity=0.307 Sum_probs=189.4
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHH-ccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISV-AVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||.||+|... +++.||+|.++... .....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 57899999986422 22334455667777764 4799999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|.+++... ..++......++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~ 152 (316)
T cd05592 81 GDLMFHIQSS----GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GK 152 (316)
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cc
Confidence 9999888753 2378888999999999999999999 99999999999999999999999999998653322 22
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... +........ ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~-----------~~ 213 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--------ELFDSILND-----------RP 213 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcC-----------CC
Confidence 33456899999999999989999999999999999999999999643211 111111100 01
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAMSE 565 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 565 (619)
.++.....++.+++.+||+.+|++||++.+
T Consensus 214 ~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 214 HFPRWISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 112223456789999999999999999753
No 144
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-38 Score=291.02 Aligned_cols=251 Identities=23% Similarity=0.333 Sum_probs=208.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..++|++++.||+|-||.||.|+.+ ++-.||+|++.+.. ..+...++.+|+++-+.++||||+++++++.+....++
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 5678999999999999999999964 67889999987543 22335678899999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
++||..+|.+...|++... ..++......++.|+|.|+.|+|.+ +|+||||||+|+|++.++..|++|||-+...
T Consensus 100 ilEya~~gel~k~L~~~~~--~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRM--KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EEEecCCchHHHHHHhccc--ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 9999999999999986432 3477888889999999999999999 9999999999999999999999999998754
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
. .......+||.-|.|||...+..++..+|+|++|++.||++.|.+||...... +.++++..- ++
T Consensus 175 p---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~--------etYkrI~k~----~~ 239 (281)
T KOG0580|consen 175 P---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS--------ETYKRIRKV----DL 239 (281)
T ss_pred C---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH--------HHHHHHHHc----cc
Confidence 3 33445678999999999999999999999999999999999999999643211 112221110 11
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.++...+....+++.+|+..+|.+|.+..|++..
T Consensus 240 -------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 240 -------KFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred -------cCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1123334578899999999999999999998863
No 145
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.6e-37 Score=315.48 Aligned_cols=252 Identities=25% Similarity=0.332 Sum_probs=199.9
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
+|+..+.||+|+||.||++... +++.||+|.+.... .......+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999964 68999999986432 12234567789999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNMG--NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 999999998886532 23488999999999999999999999 9999999999999999999999999999865432
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.. .....|+..|+|||.+.+..++.++||||+||++|||++|+.||....... ....+......
T Consensus 156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-----~~~~~~~~~~~--------- 219 (285)
T cd05605 156 ET--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-----KREEVERRVKE--------- 219 (285)
T ss_pred Cc--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-----HHHHHHHHhhh---------
Confidence 21 223468999999999998899999999999999999999999996432110 00011100000
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
....+....+..+.+++.+||+.||++|| ++.++++
T Consensus 220 -~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 220 -DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred -cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 00112233456789999999999999999 6767654
No 146
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.4e-38 Score=330.64 Aligned_cols=252 Identities=20% Similarity=0.254 Sum_probs=194.8
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.|+..+.||+|+||+||+|... +++.||+|++.... .......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999964 68899999986432 22345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIRME----VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 999999999987532 378888889999999999999999 9999999999999999999999999997643110
Q ss_pred Cc----------------------------------------------ceeeeccccccccccccccCCCCCcchhhHHH
Q 007073 452 KT----------------------------------------------NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGY 485 (619)
Q Consensus 452 ~~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~ 485 (619)
.. .......||+.|+|||.+.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 00 00123469999999999998889999999999
Q ss_pred HHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHh--ccCCCCCCCCCH
Q 007073 486 GIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALL--CTQASPEDRPAM 563 (619)
Q Consensus 486 Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPs~ 563 (619)
||++|||+||+.||........ ........ ..+..........++.+++.+ |+..+|..||++
T Consensus 235 G~il~elltG~~Pf~~~~~~~~--------~~~i~~~~-------~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTET--------QLKVINWE-------NTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHH--------HHHHHccc-------cccCCCCCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence 9999999999999964322110 00110000 000000011123466777777 556677779999
Q ss_pred HHHHH
Q 007073 564 SEVVR 568 (619)
Q Consensus 564 ~evl~ 568 (619)
.++++
T Consensus 300 ~~~l~ 304 (381)
T cd05626 300 DDIKA 304 (381)
T ss_pred HHHhc
Confidence 99985
No 147
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2e-37 Score=313.36 Aligned_cols=254 Identities=24% Similarity=0.279 Sum_probs=198.6
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchh
Q 007073 302 LGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSV 378 (619)
Q Consensus 302 lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 378 (619)
||+|+||.||++..+ +|+.||+|.+.... .......+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999965 68999999986422 122344566799999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeee
Q 007073 379 AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ 458 (619)
Q Consensus 379 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 458 (619)
.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~ 153 (277)
T cd05607 81 KYHIYNVG--ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQ 153 (277)
T ss_pred HHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeec
Confidence 98886532 23478889999999999999999999 99999999999999999999999999998664322 2234
Q ss_pred ccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCC
Q 007073 459 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYN 538 (619)
Q Consensus 459 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 538 (619)
..|+..|+|||++.+..++.++||||+||++|||++|+.||....... .......... ...... ..
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~----~~~~~~~~~~---------~~~~~~-~~ 219 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV----AKEELKRRTL---------EDEVKF-EH 219 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh----hHHHHHHHhh---------cccccc-cc
Confidence 468999999999999889999999999999999999999986422110 0111111111 000000 01
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcc
Q 007073 539 IQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLA 576 (619)
Q Consensus 539 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 576 (619)
.....++.+++.+||+.||++||++.|+++.+......
T Consensus 220 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f 257 (277)
T cd05607 220 QNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFF 257 (277)
T ss_pred ccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhh
Confidence 12345789999999999999999998888666664444
No 148
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.5e-37 Score=307.44 Aligned_cols=251 Identities=23% Similarity=0.302 Sum_probs=204.5
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|+..+.||+|++|.||+|... +|+.|++|.+.... .......+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677889999999999999975 68999999886322 334567888999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.++++... ...+++....+++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 99999999997642 24588899999999999999999999 99999999999999999999999999998765432
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
. ......|++.|+|||+..+..++.++||||||+++|||+||+.||..... . ........ +..
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~---~~~~~~~~-~~~------- 218 (256)
T cd08529 156 N-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----G---ALILKIIR-GVF------- 218 (256)
T ss_pred c-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----H---HHHHHHHc-CCC-------
Confidence 2 22334588999999999999999999999999999999999999864321 0 11111110 101
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..........+.+++.+||+.+|++||++.++++.
T Consensus 219 --~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 219 --PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11122344678999999999999999999999863
No 149
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.1e-37 Score=307.99 Aligned_cols=252 Identities=25% Similarity=0.426 Sum_probs=202.2
Q ss_pred cCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
.+|+..+.||+|+||.||+|.+.+++.+|+|.+.... .....|.+|++++++++|||++++++++......++|+||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA--MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC--CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 4677789999999999999998778899999886432 23567899999999999999999999999989999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 82 EHGCLSDYLRAQR---GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred CCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 9999999887532 2478889999999999999999999 999999999999999999999999999986543322
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.......++.+|+|||.+.++.++.++||||||+++|||++ |+.||..... ............ ...
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~---~~~-- 222 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--------SEVVETINAGFR---LYK-- 222 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHHHhCCCC---CCC--
Confidence 22222335678999999998899999999999999999998 8998853221 011111111100 011
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 223 -----~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 223 -----PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred -----CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1112367899999999999999999999998873
No 150
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.2e-38 Score=329.94 Aligned_cols=252 Identities=19% Similarity=0.241 Sum_probs=198.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||+||+|... +|+.||||++.... .......+.+|+.++..++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888999999999999999975 68999999986422 2234456788999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++... ..++...+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMKK----DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 999999999998753 2388899999999999999999999 999999999999999999999999999876532
Q ss_pred CCcc-------------------------------------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHH
Q 007073 451 RKTN-------------------------------------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 493 (619)
Q Consensus 451 ~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ell 493 (619)
.... ......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 1100 011235899999999999999999999999999999999
Q ss_pred hCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC---HHHHHH
Q 007073 494 TGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA---MSEVVR 568 (619)
Q Consensus 494 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~ 568 (619)
+|..||...... .......... ..+........+..+.+++.+|+. +|.+|++ +.++++
T Consensus 234 ~G~~Pf~~~~~~--------~~~~~i~~~~-------~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 234 VGYPPFCSDNPQ--------ETYRKIINWK-------ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred cCCCCCCCCCHH--------HHHHHHHcCC-------CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999999643211 1111111000 000000011223567888999986 9999998 777764
No 151
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.2e-37 Score=327.25 Aligned_cols=201 Identities=20% Similarity=0.275 Sum_probs=173.8
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|+..+.||+|+||+||++... +++.||+|++.+.. .......+..|+.++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999865 68999999986422 1233456788999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++... ..+++.....++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMKK----DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 999999999998753 3488999999999999999999999 999999999999999999999999999875432
Q ss_pred CCc----------------------------------ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCC
Q 007073 451 RKT----------------------------------NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 496 (619)
Q Consensus 451 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~ 496 (619)
... .......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 110 0012346999999999999999999999999999999999999
Q ss_pred CCCCC
Q 007073 497 RAIDF 501 (619)
Q Consensus 497 ~p~~~ 501 (619)
.||..
T Consensus 234 ~Pf~~ 238 (363)
T cd05628 234 PPFCS 238 (363)
T ss_pred CCCCC
Confidence 99964
No 152
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.5e-37 Score=315.39 Aligned_cols=264 Identities=25% Similarity=0.369 Sum_probs=203.8
Q ss_pred cCCcccCccccCCCceEEEEEe-----CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC--Ccc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TER 366 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 366 (619)
..|.+.+.||+|+||.||++.+ .++..||+|.++..........+.+|++++++++|||++++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467789999999999999984 357889999987554455567899999999999999999999998775 567
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.++|+|||+++
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK---NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 89999999999999986532 2478999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcc--eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccc-------cccchhHHHHHH
Q 007073 447 LVDVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLE-------EEDDVLLLDHVK 517 (619)
Q Consensus 447 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~-------~~~~~~~~~~~~ 517 (619)
........ ......++..|+|||.+.+..++.++||||||+++|||+|++.|....... ............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 76433221 122345677899999998888999999999999999999987764321100 000000111111
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...... ........+..+.+++.+|++.+|++||++.++++.|++.
T Consensus 238 ~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGK----------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCc----------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111100 0111223456899999999999999999999999998763
No 153
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.6e-37 Score=313.04 Aligned_cols=257 Identities=25% Similarity=0.400 Sum_probs=202.6
Q ss_pred cCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.+|...+.||+|+||.||++... ++..+|+|.+... .......+.+|+++++.++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 45677899999999999999742 4668999988643 3445678999999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCCC-----------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc
Q 007073 368 LVYPFMQNLSVAYRLREIKPG-----------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE 436 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 436 (619)
+++||+++++|.+++....+. ...+++..+..++.|++.|++|||+. +++||||||+||++++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCC
Confidence 999999999999998764321 13478999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHH
Q 007073 437 AVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 437 ~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 514 (619)
+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||+| |+.||...... +
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~ 232 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--------E 232 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--------H
Confidence 999999999765432211 1122335678999999999999999999999999999999 88887532211 1
Q ss_pred HHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 515 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
........... ..+...+..+.+++.+||+.||++||++.+|.+.|++
T Consensus 233 ~~~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 233 AIECITQGREL----------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHHcCccC----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 11111111000 0111233578899999999999999999999998863
No 154
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.8e-37 Score=325.77 Aligned_cols=262 Identities=23% Similarity=0.309 Sum_probs=197.9
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC-----cce
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-----ERL 367 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 367 (619)
+|++.+.||+|+||.||++.. .+|+.||||++.... .....+.+.+|+++++.++|+||+++++++..+. ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999996 478999999986432 2234567889999999999999999999998776 789
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+|+||+.+ +|...+.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~~-~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQS-DLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeecccc-CHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 99999974 67666643 23488999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh-----
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER----- 521 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----- 521 (619)
.............++..|+|||.+.+. .++.++|||||||++|||++|+.||........ ...+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-----~~~i~~~~g~~~~~ 227 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQ-----LDLITDLLGTPSLE 227 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH-----HHHHHHHcCCCCHH
Confidence 654433333445688999999998774 479999999999999999999999975432110 010000000
Q ss_pred ------hcccchhccccccC-------CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 522 ------EKRLDAIVDRNLNK-------NYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 522 ------~~~~~~~~~~~l~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
......+....... ........++.+++.+|++.||++|||+.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 228 AMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000000000 0111224578899999999999999999999863
No 155
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.9e-37 Score=307.54 Aligned_cols=248 Identities=28% Similarity=0.441 Sum_probs=197.7
Q ss_pred CccccCCCceEEEEEeCC----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
++||+|+||.||+|.+.. +..+|+|.+.........+.+.+|+.+++.++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 479999999999998532 36899999875544445678999999999999999999999875 4567999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 99999997643 478999999999999999999999 99999999999999999999999999998764433222
Q ss_pred ee--eccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 456 TT--QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 456 ~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.. ...++..|+|||.+.+..++.++||||||+++|||+| |+.||..... ........ .....
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-----~~~~~~~~---~~~~~------- 217 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-----AEVIAMLE---SGERL------- 217 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHH---cCCcC-------
Confidence 11 1223567999999998999999999999999999998 9999864221 11111111 11110
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..+...+..+.+++.+||+.+|++||++.++++.|++.
T Consensus 218 ---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 218 ---PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 11122345788999999999999999999999999873
No 156
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-37 Score=321.80 Aligned_cols=265 Identities=28% Similarity=0.392 Sum_probs=208.2
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeC--------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeee
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGF 359 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~ 359 (619)
++....+|.+.+.||+|+||.||+|... ++..||+|.++........+.+.+|+++++++ +||||++++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 3445567889999999999999999742 12368999887544444567899999999999 79999999999
Q ss_pred eeCCCcceeEecccccchhhhhhcccCC------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 007073 360 CTTPTERLLVYPFMQNLSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAA 427 (619)
Q Consensus 360 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~ 427 (619)
+......++++||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +++||||||+
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 163 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAAR 163 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccc
Confidence 9999999999999999999999875322 224588899999999999999999999 9999999999
Q ss_pred cEEeCCCCcEEEcccccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccc
Q 007073 428 NVLLDEDFEAVVGDFGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLE 505 (619)
Q Consensus 428 NIll~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~ 505 (619)
||+++.++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~- 242 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV- 242 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-
Confidence 9999999999999999998664322111 122234567999999999999999999999999999999 7888753221
Q ss_pred cccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 506 EEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
.+.......... .......+..+.+++.+||+.+|++||++.++++.|+...
T Consensus 243 -------~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 243 -------EELFKLLKEGHR----------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred -------HHHHHHHHcCCC----------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 111111111110 0111223457889999999999999999999999998764
No 157
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=334.41 Aligned_cols=261 Identities=21% Similarity=0.292 Sum_probs=192.7
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC-------
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------- 363 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------- 363 (619)
..++|.+.+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 3467999999999999999999974 68899999885321 2345799999999999999999876432
Q ss_pred -CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEcc
Q 007073 364 -TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-EAVVGD 441 (619)
Q Consensus 364 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~D 441 (619)
...++||||+++ ++.+++.........+++.....++.|++.||+|||++ +|+||||||+|||++.++ .+||+|
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 125689999985 67666655444455689999999999999999999999 999999999999999664 799999
Q ss_pred cccceeeccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
||+|+.+..... .....||+.|+|||++.+. .++.++|||||||++|||+||+.||....... .+........
T Consensus 215 FGla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~----~~~~i~~~~~ 288 (440)
T PTZ00036 215 FGSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD----QLVRIIQVLG 288 (440)
T ss_pred cccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhC
Confidence 999986643222 2235689999999988654 68999999999999999999999996432211 1111111100
Q ss_pred hh--c------------ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 007073 521 RE--K------------RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV 567 (619)
Q Consensus 521 ~~--~------------~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 567 (619)
.+ + ....+....+...++...+.++.+++.+||+.||.+|||+.|++
T Consensus 289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 00 0 00000001111111222346789999999999999999999988
No 158
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.2e-37 Score=321.54 Aligned_cols=239 Identities=25% Similarity=0.337 Sum_probs=191.5
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||+||+|..+ +++.||||++.... .......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999975 68899999986421 233456677888888876 699999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|.+++.... .++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~i~~~~----~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~ 152 (320)
T cd05590 81 GDLMFHIQKSR----RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KT 152 (320)
T ss_pred chHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Cc
Confidence 99998887532 388899999999999999999999 99999999999999999999999999987543221 22
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ......... . .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~~~-~--------~-- 213 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILND-E--------V-- 213 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcC-C--------C--
Confidence 33456899999999999999999999999999999999999999643211 111111110 0 0
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAMSE 565 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 565 (619)
..+.....++.+++.+|++.||++||++.+
T Consensus 214 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 214 VYPTWLSQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 011123457889999999999999999843
No 159
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.3e-37 Score=322.03 Aligned_cols=240 Identities=25% Similarity=0.314 Sum_probs=190.3
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHH---HHccCCCccceeeeeeCCCcceeE
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMI---SVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
|++.+.||+|+||.||+|... +|+.||||+++... .....+.+.+|++++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999999999965 68999999986432 222345666776665 466799999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|...++. ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 999999999888754 2489999999999999999999999 99999999999999999999999999987532
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... +.........
T Consensus 153 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~------ 217 (324)
T cd05589 153 GFG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--------EVFDSIVNDE------ 217 (324)
T ss_pred CCC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC------
Confidence 221 2223456899999999999999999999999999999999999999643211 1111111100
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
..++...+..+.+++.+|++.||++||++
T Consensus 218 -----~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 218 -----VRYPRFLSREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred -----CCCCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 01112234578899999999999999953
No 160
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=9.3e-38 Score=304.93 Aligned_cols=267 Identities=23% Similarity=0.276 Sum_probs=202.0
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCC-ccceeeeeeCCC------
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRN-LLRLIGFCTTPT------ 364 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~------ 364 (619)
..|...++||+|+||+||+|+. .+|+.||+|+++-... ++.-....+|+.+++.++|+| ||++++++.+.+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 4466677899999999999995 4789999999974332 233355679999999999999 999999998877
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++|+||++. +|..++.........++....+.++.|+.+||+|||++ +|+||||||.|||++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 68899999976 88888887654323466688999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh-
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE- 522 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 522 (619)
|+....... ..+..++|..|.|||++.+. .|++..||||+||++.||++++.-|+..... ..+......+..+
T Consensus 167 Ara~~ip~~-~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~----~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 167 ARAFSIPMR-TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI----DQLFRIFRLLGTPN 241 (323)
T ss_pred HHHhcCCcc-cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH----HHHHHHHHHcCCCC
Confidence 996653322 24455689999999999886 6999999999999999999999888765431 1111111111111
Q ss_pred -cccchhc---ccc--ccCC-----CC---HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 523 -KRLDAIV---DRN--LNKN-----YN---IQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 523 -~~~~~~~---~~~--l~~~-----~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.....+. +-. .... .. +....+..+++.+|++.+|.+|.|++.++++
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1111100 100 0000 00 1111478899999999999999999999875
No 161
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.5e-37 Score=321.49 Aligned_cols=242 Identities=23% Similarity=0.286 Sum_probs=193.5
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCC-CccceeeeeeCCCcceeEe
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHR-NLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~ 370 (619)
+|++.+.||+|+||.||+|... +++.||||++.... .....+.+..|.+++..+.|+ +|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999975 57899999986422 233456788899999999765 5888999999899999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQV----GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 999999999888653 2378889999999999999999999 999999999999999999999999999875322
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.. .......||+.|+|||++.+..++.++||||+||++|||+||+.||...... ........
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~--------- 215 (324)
T cd05587 154 GG-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQSIME--------- 215 (324)
T ss_pred CC-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHc---------
Confidence 22 1233456999999999999999999999999999999999999999643211 11111110
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
.. ..++......+.+++.+|++.||.+||+.
T Consensus 216 ~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 216 HN--VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CC--CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00 01122234578899999999999999986
No 162
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.1e-37 Score=308.16 Aligned_cols=249 Identities=29% Similarity=0.394 Sum_probs=199.6
Q ss_pred CccccCCCceEEEEEeCC--C--cEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLAD--G--TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~--g--~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|++|.||+|.+.+ + ..||+|.+.........+.+.+|+.++++++||||+++++++.. ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999743 3 36999998754433556789999999999999999999999888 888999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
++|.+++..... ..+++.....++.|++.||+|||++ +++|+||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999976432 4589999999999999999999999 99999999999999999999999999998765432221
Q ss_pred --eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 456 --TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 456 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.....++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +...........
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~------- 219 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--------QILKKIDKEGER------- 219 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHhcCCc-------
Confidence 112456789999999998899999999999999999999 99998532211 111111110000
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
...+...+..+.+++.+|++.+|++||++.++++.|.
T Consensus 220 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 220 --LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0111223467899999999999999999999999875
No 163
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3e-37 Score=307.99 Aligned_cols=251 Identities=17% Similarity=0.274 Sum_probs=203.6
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
+|++.+.||+|+||.||++... ++..+|+|.++........+.+.+|+.+++.++|+||+++++++......+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999965 689999999864444445677889999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++++|.+++.... ...++......++.|++.||.|||++ +|+|+||||+||++++++.++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 81 DGGDLMQKIKLQR--GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred CCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 9999998886532 23478888999999999999999999 999999999999999999999999999986643222
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ........ ....
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~~------- 218 (255)
T cd08219 156 -YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK--------NLILKVCQ-GSYK------- 218 (255)
T ss_pred -ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH--------HHHHHHhc-CCCC-------
Confidence 223356889999999999888999999999999999999999999643211 11111111 1110
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..+...+..+.+++.+||+.||++||++.+++..
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 --PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1122234578899999999999999999999864
No 164
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.9e-37 Score=310.80 Aligned_cols=256 Identities=23% Similarity=0.368 Sum_probs=203.7
Q ss_pred hcCCcccCccccCCCceEEEEEeCC----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
.++|.+.+.||+|+||.||+|.+.+ ...||||...........+.+.+|+.+++.++||||+++++++.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 4567888999999999999999643 246899988654444456789999999999999999999998865 45789
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 84 VMELAPLGELRSYLQVNK---YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEcCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 999999999999997532 2488999999999999999999998 9999999999999999999999999999876
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
............++..|+|||.+....++.++||||||+++||+++ |..||...... .. ..........
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~---~~~~~~~~~~-- 227 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-----DV---IGRIENGERL-- 227 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-----HH---HHHHHcCCcC--
Confidence 5433222223334568999999988889999999999999999996 99998643211 11 1111111111
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..+...+..+.+++.+|+..+|++|||+.++++.|+..
T Consensus 228 --------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 228 --------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11223346789999999999999999999999999874
No 165
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.9e-37 Score=318.60 Aligned_cols=263 Identities=22% Similarity=0.321 Sum_probs=198.8
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|...+.||+|+||.||+|..+ +++.||+|.++..........+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999965 67889999987544444456678999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++ +|..++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 86 LDK-DLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 986 777776543 23478888999999999999999999 99999999999999999999999999997653322
Q ss_pred cceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh-----------
Q 007073 453 TNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE----------- 520 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------- 520 (619)
. ......+++.|+|||.+.+ ..++.++|||||||++|||+||+.||........ .........
T Consensus 159 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 159 K-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE----LHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred c-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCCCHHHHhhhc
Confidence 2 1223457899999998865 4689999999999999999999999975432111 001100000
Q ss_pred hhcccchhccccccC----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 521 REKRLDAIVDRNLNK----NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..........+.... ...+....++.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000000000000 001123456789999999999999999999985
No 166
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.1e-37 Score=318.74 Aligned_cols=241 Identities=23% Similarity=0.318 Sum_probs=192.1
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
++||+|+||.||+|... +|+.||+|++.... .......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999975 57899999986432 233445677899988865 799999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|...+... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (321)
T cd05591 81 GDLMFQIQRS----RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VT 152 (321)
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-cc
Confidence 9999888653 2378889999999999999999999 99999999999999999999999999987543222 22
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .......... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--------~~~~~i~~~~---------~-- 213 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--------DLFESILHDD---------V-- 213 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCC---------C--
Confidence 33456899999999999999999999999999999999999999743211 1111111110 0
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCC-------CHHHHH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRP-------AMSEVV 567 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-------s~~evl 567 (619)
..+.....++.+++.+|++.||++|| ++.+++
T Consensus 214 ~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~ 252 (321)
T cd05591 214 LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIK 252 (321)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHh
Confidence 01111235788999999999999999 666665
No 167
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.8e-37 Score=306.14 Aligned_cols=248 Identities=28% Similarity=0.388 Sum_probs=199.8
Q ss_pred cCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeee-CCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT-TPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lv~e~ 372 (619)
++|.+.+.||+|+||.||++... |+.||+|..+.. ...+.|.+|+.++++++|+|++++++++. ..+..++++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC---chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 46888899999999999999874 888999988642 23567899999999999999999999764 45668999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++.... ...+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 82 MAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156 (256)
T ss_pred CCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence 99999999987532 23478999999999999999999999 99999999999999999999999999987543221
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
....++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+.........
T Consensus 157 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~-------- 216 (256)
T cd05082 157 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPRVEKGY-------- 216 (256)
T ss_pred ----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCC--------
Confidence 22334668999999998899999999999999999998 8988853221 11111111110
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
........+..+.+++.+|++.+|++|||+.++++.|+.
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 217 --KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred --CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 011122334678999999999999999999999999875
No 168
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=6.5e-37 Score=304.71 Aligned_cols=249 Identities=29% Similarity=0.434 Sum_probs=199.5
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchhh
Q 007073 300 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVA 379 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 379 (619)
++||+|+||.||++...+++.||+|.+...........+.+|++++++++|+||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46999999999999987799999998875444445678999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCccee-ee
Q 007073 380 YRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT-TQ 458 (619)
Q Consensus 380 ~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~-~~ 458 (619)
+++.... ..+++.....++.+++.|++|||++ +++||||||+||+++.++.+||+|||++........... ..
T Consensus 81 ~~l~~~~---~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKKK---NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 9986532 2478888999999999999999999 999999999999999999999999999986542211111 11
Q ss_pred ccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCC
Q 007073 459 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNY 537 (619)
Q Consensus 459 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 537 (619)
..++..|+|||.+.++.++.++||||||+++|||+| |..||...... .......... ....
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--------~~~~~~~~~~----------~~~~ 216 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--------QTRERIESGY----------RMPA 216 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--------HHHHHHhcCC----------CCCC
Confidence 223567999999998899999999999999999999 78887543211 1111111000 0111
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 538 NIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 538 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
+...+..+.+++.+|++.+|++||++.|+++.|++
T Consensus 217 ~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 217 PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 22334679999999999999999999999998863
No 169
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.3e-37 Score=316.66 Aligned_cols=262 Identities=23% Similarity=0.303 Sum_probs=201.7
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|++.+.||+|+||.||++... +|..+|+|.++..........+.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888999999999999999965 68889999886543334456788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++... ..+++.....++.|+++||.|||+.+ +++|+||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 81 MDGGSLDQVLKKA----GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 9999999999753 33788899999999999999999732 8999999999999999999999999998754322
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc---------
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK--------- 523 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------- 523 (619)
......|+..|+|||.+.+..++.++||||||+++|||+||+.||....... ............
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-----LEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh-----HHHhhcCccccccccCCcccc
Confidence 1233468899999999988889999999999999999999999986432110 000000000000
Q ss_pred ---------------ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 524 ---------------RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 524 ---------------~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
....+...............++.+++.+|++.+|++||++.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000000011234578999999999999999999999864
No 170
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.3e-38 Score=324.01 Aligned_cols=242 Identities=21% Similarity=0.238 Sum_probs=194.1
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
+.||+|+||.||++... +|+.||+|.+.... .......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999964 78999999986422 2234466788999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
+|..++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (325)
T cd05594 81 ELFFHLSRE----RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-AT 152 (325)
T ss_pred cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-cc
Confidence 998888653 348899999999999999999997 7 99999999999999999999999999987543221 12
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ........ .. .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--------~~~~~i~~-~~----------~ 213 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILM-EE----------I 213 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--------HHHHHHhc-CC----------C
Confidence 23456999999999999999999999999999999999999999643211 01111100 00 0
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
.++.....++.+++.+|++.||++|+ ++.++++
T Consensus 214 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 214 RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 11122345788999999999999996 8888874
No 171
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.6e-37 Score=305.97 Aligned_cols=251 Identities=32% Similarity=0.487 Sum_probs=204.8
Q ss_pred CccccCCCceEEEEEeCC----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||.||+|...+ +..||+|.++........+.+.+|++++..++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999753 7899999997654444567899999999999999999999999998999999999999
Q ss_pred chhhhhhcccCCC-----CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 376 LSVAYRLREIKPG-----EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 376 gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
++|.+++...... ...+++..+..++.|++.||+|||++ +++|+||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999875322 35589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 451 RKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 451 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
... .......++..|+|||.+....++.++||||+|+++|||++ |..||...... +.........
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~----- 224 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--------EVLEYLRKGY----- 224 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCC-----
Confidence 321 12233457889999999988889999999999999999999 68988643211 1111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
....+...+.++.+++.+||+.+|++|||+.++++.|+
T Consensus 225 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 -----RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -----CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 01112233568899999999999999999999999874
No 172
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.9e-37 Score=310.69 Aligned_cols=258 Identities=24% Similarity=0.382 Sum_probs=204.1
Q ss_pred cCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
++|+....||+|+||.||+|..+ +.+.||+|.+...........+.+|++++++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888899999999999999964 346799998865333334678999999999999999999999999988999
Q ss_pred eEecccccchhhhhhcccCCCC-----CCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 368 LVYPFMQNLSVAYRLREIKPGE-----PVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~-----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
+||||+++|+|.+++....... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997644221 2589999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhh
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
|++...............++..|+|||.+.+..++.++||||||+++|+|++ |..||..... ... +....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-----~~~---~~~~~- 232 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-----EEV---LNRLQ- 232 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch-----HHH---HHHHH-
Confidence 9987543322222333456778999999988889999999999999999999 7778743211 111 11111
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
..... .......+..+.+++.+||+.+|++||++.++++.|.
T Consensus 233 ~~~~~--------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 AGKLE--------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred cCCcC--------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 01110 0111223457899999999999999999999999885
No 173
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.5e-37 Score=309.96 Aligned_cols=252 Identities=27% Similarity=0.457 Sum_probs=199.4
Q ss_pred CccccCCCceEEEEEeCC-------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 300 NVLGQGGFGKVYRGVLAD-------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~-------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+.||+|+||.||+|...+ +..+|+|.+...........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 468999999999999643 2579999886544445567899999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCC---CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-----cEEEccccc
Q 007073 373 MQNLSVAYRLREIKP---GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-----EAVVGDFGL 444 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~DfGl 444 (619)
+++++|.+++..... ....+++..+..++.|++.||+|||+. +++|+||||+||+++.+. .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999975432 224478899999999999999999998 999999999999999877 899999999
Q ss_pred ceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 445 AKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 445 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
++........ ......++..|+|||.+.++.++.++|||||||++|||+| |+.||..... . +........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~-----~---~~~~~~~~~ 229 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN-----Q---EVLQHVTAG 229 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH-----H---HHHHHHhcC
Confidence 9765332211 1122345678999999999999999999999999999998 9999863221 1 111111111
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.. .......+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 230 ~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 230 GR----------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred Cc----------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 10 11122345678999999999999999999999998863
No 174
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.6e-37 Score=326.69 Aligned_cols=261 Identities=20% Similarity=0.244 Sum_probs=202.9
Q ss_pred HHHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeC
Q 007073 286 WRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT 362 (619)
Q Consensus 286 ~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 362 (619)
.+++....++|++.+.||+|+||.||++... +++.||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4456667789999999999999999999975 68899999986321 22334567889999999999999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
+...++||||+++|+|.+++... .++...+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeC
Confidence 99999999999999999988652 267788888999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG----KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
|+++..............||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .....
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~ 258 (371)
T cd05622 187 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSK 258 (371)
T ss_pred CceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence 99987654333333455799999999998653 3789999999999999999999999743221 11111
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPED--RPAMSEVVRM 569 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 569 (619)
.......... ......+..+.+++..|++.++.+ ||++.++++.
T Consensus 259 i~~~~~~~~~-------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 259 IMNHKNSLTF-------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred HHcCCCcccC-------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 1111000000 011233457788999999844433 7788888764
No 175
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=302.40 Aligned_cols=263 Identities=23% Similarity=0.343 Sum_probs=201.0
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEecc-CCCcchHHHHHHHHHHHHHccCCCccceeeeeeC-----CC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTD-FESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT-----PT 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~ 364 (619)
....|...+.||+|+||.|+.+..+ +|+.||||++.+ .......+.-.+|+++++.++|+||+.+.+++.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4455666789999999999999964 799999999873 3445556778899999999999999999998865 35
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++|+|+|+ -+|...++.. ..++......+..|+.+||.|+|+. +|+|||+||+|++++.+..+||+|||+
T Consensus 100 DvYiV~elMe-tDL~~iik~~----~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQ----QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcC----ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 6899999994 4888877753 3388888999999999999999999 999999999999999999999999999
Q ss_pred ceeeccC-CcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH---
Q 007073 445 AKLVDVR-KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL--- 519 (619)
Q Consensus 445 a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 519 (619)
|+..... .....+.++.|..|.|||++.. ..||.+.||||.||++.||++|+.-|.+...-.+ .......
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Q-----l~lI~~~lGt 246 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQ-----LQLILELLGT 246 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHH-----HHHHHHhcCC
Confidence 9987542 1223466778999999998754 6799999999999999999999999875432111 1111000
Q ss_pred hhhcccch--------hcc-------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 520 EREKRLDA--------IVD-------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 520 ~~~~~~~~--------~~~-------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+..+.. .+. ..+..- -+...+...+|+.+|+..||.+|+|++|.++
T Consensus 247 P~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~-fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 247 PSEEDLQKIRSEKARPYIKSLPQIPKQPFSSI-FPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred CCHHHHHHhccHHHHHHHHhCCCCCCCCHHHH-cCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000 000 000000 1233457789999999999999999999985
No 176
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5.8e-37 Score=308.44 Aligned_cols=255 Identities=23% Similarity=0.327 Sum_probs=203.0
Q ss_pred CCcccCccccCCCceEEEEEeCC--CcEEEEEEeccC---------CCcchHHHHHHHHHHHHH-ccCCCccceeeeeeC
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLAD--GTKVAVKRLTDF---------ESPGGDAAFQREVEMISV-AVHRNLLRLIGFCTT 362 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~~--g~~vAvK~l~~~---------~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~ 362 (619)
+|++.+.||+|+||.||+|.... ++.+|+|.+... ........+.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999999764 688999987532 122234567788888765 799999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEcc
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGD 441 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~D 441 (619)
.+..+++|||+++++|.+++.........+++..+++++.|++.||.|||+ . +++|+||+|+||+++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 999999999999999999886544445568899999999999999999996 5 899999999999999999999999
Q ss_pred cccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
||.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ........
T Consensus 158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~--------~~~~~~~~ 227 (269)
T cd08528 158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--------SLATKIVE 227 (269)
T ss_pred ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--------HHHHHHhh
Confidence 99998764432 233456889999999999888999999999999999999999998633211 11111111
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
. ... .......+..+.+++.+||+.||++||++.|+..+++
T Consensus 228 ~-~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 A-VYE--------PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred c-cCC--------cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0 000 0011123467899999999999999999999999875
No 177
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.1e-37 Score=307.90 Aligned_cols=255 Identities=21% Similarity=0.272 Sum_probs=200.0
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.++++++||||+++++++...+..++|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP-GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc-cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 45788899999999999999996 478899999986432 2344567899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.++++.. ..+++..+..++.|++.|+.|||+. +|+|||+||+||+++.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 87 YCGGGSLQDIYHVT----GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred CCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 99999999988643 2478899999999999999999999 9999999999999999999999999999866432
Q ss_pred Ccceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 452 KTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
.. ......|+..|+|||.+. ...++.++|||||||++|||+||+.||......... ..... ...
T Consensus 160 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~--------~~~~~-~~~--- 226 (267)
T cd06646 160 IA-KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL--------FLMSK-SNF--- 226 (267)
T ss_pred cc-ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh--------eeeec-CCC---
Confidence 21 122345888999999884 445788999999999999999999998532211000 00000 000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 570 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 570 (619)
..+.. ......+..+.+++.+||+.+|++||+++++++.|
T Consensus 227 ~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 227 QPPKL--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCC--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00000 01122346789999999999999999999998753
No 178
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=7.7e-37 Score=306.20 Aligned_cols=250 Identities=30% Similarity=0.432 Sum_probs=192.4
Q ss_pred CccccCCCceEEEEEeC----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC-CCcceeEecccc
Q 007073 300 NVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT-PTERLLVYPFMQ 374 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~e~~~ 374 (619)
+.||+|+||.||+|.+. ++..||+|++.........+.+.+|+.+++.++||||+++++++.. +...++++||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999863 2457999988644434456788899999999999999999998764 456789999999
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
+|+|.+++.... ...++.....++.|++.||+|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSET---HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 999999987532 2256777889999999999999999 9999999999999999999999999999765332111
Q ss_pred ---eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCC-CCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 455 ---VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ-RAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 455 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
......++..|+|||.+.+..++.++|||||||++|||+||+ .||.... .. ............
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-----~~---~~~~~~~~~~~~----- 221 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-----SF---DITVYLLQGRRL----- 221 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-----HH---HHHHHHhcCCCC-----
Confidence 112234577899999998889999999999999999999965 4443211 11 111111111100
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..+...+..+.+++.+||+.+|++||++.++++.|+..
T Consensus 222 -----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 222 -----LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred -----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 01112235788999999999999999999999999873
No 179
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3e-37 Score=318.38 Aligned_cols=242 Identities=25% Similarity=0.319 Sum_probs=193.7
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||+||+|... +++.||||.++... .......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 57899999987432 233456677898998877 699999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|.+.+... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (318)
T cd05570 81 GDLMFHIQRS----GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VT 152 (318)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cc
Confidence 9999888753 2488999999999999999999999 99999999999999999999999999987532222 12
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....|++.|+|||.+.+..++.++|||||||++|||+||+.||...... ......... ..
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--------~~~~~i~~~---------~~-- 213 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--------ELFQSILED---------EV-- 213 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--------HHHHHHHcC---------CC--
Confidence 23346899999999999999999999999999999999999999643211 111111110 00
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAM-----SEVVR 568 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~ 568 (619)
.++...+..+.+++.+||+.||++||++ .++++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1112234578999999999999999998 66653
No 180
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.6e-37 Score=311.20 Aligned_cols=259 Identities=21% Similarity=0.313 Sum_probs=205.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|++.+.||+|+||+||++... +|+.||+|.+.........+.+.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 356778899999999999999965 6889999988654445556789999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++... ..+++.....++.+++.||.|||+.. +++||||||+||++++++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 84 FMDCGSLDRIYKKG----GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred cCCCCCHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 99999999888753 23789999999999999999999731 8999999999999999999999999998754221
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccccc---chhHHHHHHHHhhhcccchh
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEED---DVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 528 (619)
. .....|+..|+|||.+.+..++.++|||||||++|+|+||+.||+........ ..............
T Consensus 158 ~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 228 (284)
T cd06620 158 I---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE------ 228 (284)
T ss_pred c---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc------
Confidence 1 22346899999999998889999999999999999999999999754322110 01111111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..........+..+.+++.+|++.||++|||+.|+++.
T Consensus 229 ---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 229 ---PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred ---cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00000112244678999999999999999999999975
No 181
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.7e-37 Score=342.64 Aligned_cols=261 Identities=20% Similarity=0.302 Sum_probs=202.5
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.++||+|+||.||+|... +|+.||+|++..... ....+.|.+|++++++++||||+++++++...+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47889999999999999999975 589999999874322 233567999999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCC-------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 371 PFMQNLSVAYRLREIKP-------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
||+++|+|.+++..... .....++....+++.|+++||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 99999999998864211 123356778889999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCc-----------------ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccc
Q 007073 444 LAKLVDVRKT-----------------NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEE 506 (619)
Q Consensus 444 la~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~ 506 (619)
+++....... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~- 237 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR- 237 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh-
Confidence 9987621110 0111246899999999999999999999999999999999999998642110
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHhcC
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-AMSEVVRMLEGE 573 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~ 573 (619)
... ..... .++. ........+..+.+++.+|++.||++|| +++++.+.|+..
T Consensus 238 ----ki~-~~~~i---------~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 238 ----KIS-YRDVI---------LSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred ----hhh-hhhhc---------cChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000 00000 0000 0000112345688999999999999996 567777777653
No 182
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.9e-37 Score=317.09 Aligned_cols=240 Identities=24% Similarity=0.323 Sum_probs=190.6
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHH-ccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISV-AVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||.||+|... +++.||||+++... .......+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46899999999999975 57899999986432 12334556778888875 5899999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|.+++... ..+++.....++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 81 g~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 152 (316)
T cd05619 81 GDLMFHIQSC----HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-K 152 (316)
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-c
Confidence 9999988753 2378889999999999999999999 999999999999999999999999999875422221 2
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... +......... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~-------~---- 213 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--------ELFQSIRMDN-------P---- 213 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC-------C----
Confidence 33456899999999999989999999999999999999999999643211 1111111100 0
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHH-HH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAMS-EV 566 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-ev 566 (619)
.++......+.+++.+|++.||++||++. ++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l 245 (316)
T cd05619 214 CYPRWLTREAKDILVKLFVREPERRLGVKGDI 245 (316)
T ss_pred CCCccCCHHHHHHHHHHhccCHhhcCCChHHH
Confidence 01112235678999999999999999997 44
No 183
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7.2e-37 Score=316.76 Aligned_cols=245 Identities=22% Similarity=0.238 Sum_probs=191.3
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||.||+|... +++.||+|+++... .....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 67899999997532 223345678899998887 699999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (327)
T cd05617 81 GDLMFHMQRQ----RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDT 152 (327)
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CCc
Confidence 9998887643 2488999999999999999999999 9999999999999999999999999998753221 122
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||+........ ...............
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~---------- 220 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM--NTEDYLFQVILEKPI---------- 220 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc--ccHHHHHHHHHhCCC----------
Confidence 33456999999999999999999999999999999999999999643221111 011111111111100
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAMS 564 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 564 (619)
..+...+..+.+++.+|++.||++||++.
T Consensus 221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 11122235678999999999999999853
No 184
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.4e-37 Score=306.66 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=198.8
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchH-HHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGD-AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
|++.+.||+|+||+||++... +++.||+|.+......... ....+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567889999999999999976 5678999999754432222 23456999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++++|.+++.. ...+++..+..++.|+++||.+||+. +++|+||||+||+++.++.++|+|||.+.... ...
T Consensus 81 ~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~ 152 (260)
T PF00069_consen 81 PGGSLQDYLQK----NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENN 152 (260)
T ss_dssp TTEBHHHHHHH----HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST-STT
T ss_pred ccccccccccc----cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccc
Confidence 99999999983 23489999999999999999999999 99999999999999999999999999998642 222
Q ss_pred ceeeecccccccccccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 454 NVTTQVRGTMGHIAPEYLS-TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.......++..|+|||.+. +..++.++||||+|+++|+|++|+.||....... ...................
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-- 225 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD-----QLEIIEKILKRPLPSSSQQ-- 225 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH-----HHHHHHHHHHTHHHHHTTS--
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchh-----hhhhhhhcccccccccccc--
Confidence 3344566899999999998 7889999999999999999999999987541110 0011111100000000000
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.......+.+++.+|++.||++||++.++++
T Consensus 226 -----~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 226 -----SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp -----HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred -----cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0001268999999999999999999999875
No 185
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.5e-37 Score=319.81 Aligned_cols=242 Identities=23% Similarity=0.281 Sum_probs=193.2
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEe
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 370 (619)
+|.+.+.||+|+||.||+|... +++.||+|.+.+.. .......+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999975 57899999987432 122345567788888777 5899999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+.+.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQVG----RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 9999999998886532 378899999999999999999999 999999999999999999999999999975432
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.. .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... .. ......
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-----~~---~~~i~~--------- 215 (323)
T cd05616 154 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----EL---FQSIME--------- 215 (323)
T ss_pred CC-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-----HH---HHHHHh---------
Confidence 22 2233456899999999999999999999999999999999999999643211 11 111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
.. ..++...+.++.+++.+|++.+|++|++.
T Consensus 216 ~~--~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 216 HN--VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CC--CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 00 01122334678899999999999999985
No 186
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.4e-36 Score=305.62 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=190.6
Q ss_pred ccccCCCceEEEEEeCCC---cEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccch
Q 007073 301 VLGQGGFGKVYRGVLADG---TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLS 377 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~~~~g---~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 377 (619)
.||+|+||.||+|...++ ..+++|.+.........+.|.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999985433 35667776544444456789999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC-ccee
Q 007073 378 VAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK-TNVT 456 (619)
Q Consensus 378 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~-~~~~ 456 (619)
|.++++.........+......++.|+++||+|||+. +++||||||+||+++.++.+||+|||++....... ....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 9999986543334467777889999999999999999 99999999999999999999999999986432111 1122
Q ss_pred eeccccccccccccccC-------CCCCcchhhHHHHHHHHHHHhC-CCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 457 TQVRGTMGHIAPEYLST-------GKSSERTDVFGYGIMLLELVTG-QRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 457 ~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~S~Gv~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
....++..|+|||++.. ..++.++||||||+++|||+++ ..||..... . +........ .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~---~~~~~~~~~-~~~~~ 229 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----R---EVLNHVIKD-QQVKL 229 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----H---HHHHHHHhh-ccccc
Confidence 33457889999998753 2457899999999999999974 667643221 1 111111111 11122
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
.++.+.. .....+.+++..|| .+|++||++.+|++.|.
T Consensus 230 ~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLEL----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCC----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2222221 23356788999999 67999999999998873
No 187
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.4e-37 Score=325.74 Aligned_cols=253 Identities=19% Similarity=0.222 Sum_probs=195.6
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|.+.+.||+|+||.||++... +|+.||||++.... .....+.+.+|++++++++||||+++++++..+...++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999864 78999999986422 2234567888999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++... ..++......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIKY----DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 999999999998753 2378888899999999999999999 999999999999999999999999999964321
Q ss_pred CCcc----------------------------------------------eeeeccccccccccccccCCCCCcchhhHH
Q 007073 451 RKTN----------------------------------------------VTTQVRGTMGHIAPEYLSTGKSSERTDVFG 484 (619)
Q Consensus 451 ~~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S 484 (619)
.... ......||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 0000 001246899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCC---C
Q 007073 485 YGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDR---P 561 (619)
Q Consensus 485 ~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---P 561 (619)
|||++|||+||+.||...... +.......... .+.-+ . ......++.+++.+|+. +|.+| |
T Consensus 234 lGvil~elltG~~Pf~~~~~~--------~~~~~i~~~~~--~~~~p---~--~~~~s~~~~dli~~lL~-~~~~r~~r~ 297 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSH--------ETYRKIINWRE--TLYFP---D--DIHLSVEAEDLIRRLIT-NAENRLGRG 297 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHH--------HHHHHHHccCC--ccCCC---C--CCCCCHHHHHHHHHHhc-CHhhcCCCC
Confidence 999999999999999643211 11111110000 00000 0 11223567899999997 66665 5
Q ss_pred CHHHHHHH
Q 007073 562 AMSEVVRM 569 (619)
Q Consensus 562 s~~evl~~ 569 (619)
++.++++.
T Consensus 298 ~~~~~l~h 305 (377)
T cd05629 298 GAHEIKSH 305 (377)
T ss_pred CHHHHhcC
Confidence 88888753
No 188
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.9e-37 Score=314.09 Aligned_cols=256 Identities=27% Similarity=0.432 Sum_probs=200.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCc----EEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.++|+..+.||+|+||.||+|.+. +|. .||+|.+...........+.+|+.+++.++||||+++++++..+ ...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 456778899999999999999864 444 57899886544444455788999999999999999999998754 467
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+++||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK---DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeehhcCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 8999999999999887532 2478889999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 448 VDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 448 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
....... ......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... ...+.. ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~-----~~~~~~---~~~~~~ 230 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR-----EIPDLL---EKGERL 230 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH---HCCCCC
Confidence 6432221 1222345678999999998899999999999999999998 88888532210 111111 111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.........+.+++..||..+|++||++.++++.|+..
T Consensus 231 ----------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 231 ----------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 01122335788999999999999999999999999874
No 189
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.4e-37 Score=310.95 Aligned_cols=264 Identities=24% Similarity=0.372 Sum_probs=205.5
Q ss_pred cCCcccCccccCCCceEEEEEeC-----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC--CCcc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT--PTER 366 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 366 (619)
+.|...+.||+|+||.||+|.+. ++..||||.+...........|.+|+++++.+.|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45677789999999999999863 3689999998754333356789999999999999999999999877 5578
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
+++|||+++++|.+++.... ..+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||.+.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR---DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc---cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 99999999999999997643 2489999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcce--eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccccc-------chhHHHHHH
Q 007073 447 LVDVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEED-------DVLLLDHVK 517 (619)
Q Consensus 447 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~-------~~~~~~~~~ 517 (619)
......... .....++..|+|||.+.+..++.++||||||+++|||+||+.|+......... .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 765322211 11223456799999998889999999999999999999999997643221100 000111111
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.. ............+..+.+++.+||+.+|++|||+.||+++|+.+
T Consensus 238 ~~----------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 238 LL----------KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HH----------HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11 11111111223346799999999999999999999999999874
No 190
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1e-36 Score=308.41 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=203.9
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCc----EEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
..+|.+.+.||+|+||.||+|.+. +|. .||+|.+...........+.+|+.++++++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 356788899999999999999964 333 6899988755444456788999999999999999999999987 7789
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+|+||+++|+|.+++.... ..+++.....++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHK---DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEecCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 9999999999999987632 2388999999999999999999998 999999999999999999999999999987
Q ss_pred eccCCccee-eeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 448 VDVRKTNVT-TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 448 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
......... ....++..|+|||.+....++.++||||||+++||++| |+.||...... +..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~- 229 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--------EIPDLLEKGER- 229 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhCCCC-
Confidence 653322211 12223568999999988899999999999999999999 99998643211 11111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+......+.+++.+||..+|++||++.++++.|+..
T Consensus 230 ---------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 230 ---------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 011112335788999999999999999999999999874
No 191
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.8e-38 Score=323.28 Aligned_cols=239 Identities=23% Similarity=0.280 Sum_probs=192.5
Q ss_pred CccccCCCceEEEEEe----CCCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccc
Q 007073 300 NVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQ 374 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 374 (619)
+.||+|+||.||++.. .+|+.||+|++..... ......+..|++++++++||||+++++++..+...++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 3688999999864321 2234567789999999999999999999999999999999999
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~ 153 (318)
T cd05582 82 GGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-K 153 (318)
T ss_pred CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-C
Confidence 99999988653 3488999999999999999999999 99999999999999999999999999998654322 2
Q ss_pred eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccccc
Q 007073 455 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLN 534 (619)
Q Consensus 455 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 534 (619)
......|++.|+|||.+.+..++.++|||||||++|||+||+.||...... ......... ..
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--------~~~~~i~~~-~~--------- 215 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--------ETMTMILKA-KL--------- 215 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--------HHHHHHHcC-CC---------
Confidence 233456899999999999888999999999999999999999999643211 111111110 00
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 007073 535 KNYNIQEVETMIQVALLCTQASPEDRPAMSE 565 (619)
Q Consensus 535 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 565 (619)
..+......+.+++.+||+.||++||++.+
T Consensus 216 -~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 -GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 112223457889999999999999999666
No 192
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.9e-38 Score=305.21 Aligned_cols=249 Identities=19% Similarity=0.315 Sum_probs=208.4
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
..+|++.+.||+|.||.|-+|.. ..|+.||||.+++..- .+..-.+.+|+++|+.++||||+.++.+|...+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 34677888999999999999994 6899999999986543 33445678999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||..+|.|.+++.+... ++..+...++.||..|+.|+|.+ +++|||||-+|||+|.++++||+|||++.++.
T Consensus 132 MEYaS~GeLYDYiSer~~----LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGS----LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEecCCccHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc
Confidence 999999999999987543 89999999999999999999999 99999999999999999999999999998775
Q ss_pred cCCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
.. .....++|++-|.+||+..+.+| .+.+|-||+||++|-|+.|..||+.... ...+..+....
T Consensus 205 ~~--kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--------k~lvrQIs~Ga----- 269 (668)
T KOG0611|consen 205 DK--KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--------KRLVRQISRGA----- 269 (668)
T ss_pred cc--cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--------HHHHHHhhccc-----
Confidence 43 23456789999999999999988 6899999999999999999999985321 12222222111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 570 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 570 (619)
.+ .+..+.+..-|+.+|+..+|++|-|..+|....
T Consensus 270 ----Yr---EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 270 ----YR---EPETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred ----cc---CCCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 11 122234556789999999999999999998764
No 193
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1e-36 Score=307.58 Aligned_cols=248 Identities=23% Similarity=0.346 Sum_probs=203.7
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|+..+.||.|+||.||+|... +++.||+|.+...........+.+|+++++.++|+||+++++++..+...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36778899999999999999965 68999999986544445567789999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++... .+++.....++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 81 CGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 9999999998753 588999999999999999999999 99999999999999999999999999998775432
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
. ......|+..|+|||.+.+..++.++||||||+++|||+||+.||...... ....... ....
T Consensus 153 ~-~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--------~~~~~~~-~~~~------- 215 (274)
T cd06609 153 S-KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--------RVLFLIP-KNNP------- 215 (274)
T ss_pred c-ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--------HHHHHhh-hcCC-------
Confidence 2 223346888999999999888999999999999999999999998643210 0111111 0101
Q ss_pred ccCCCCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQ-EVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...... .+..+.+++.+||..+|++|||++++++
T Consensus 216 --~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 216 --PSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred --CCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 011111 3457889999999999999999999975
No 194
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=9.9e-37 Score=306.80 Aligned_cols=254 Identities=25% Similarity=0.367 Sum_probs=190.6
Q ss_pred ccccCCCceEEEEEeCC---CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccch
Q 007073 301 VLGQGGFGKVYRGVLAD---GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLS 377 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~~~~---g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 377 (619)
.||+|+||.||+|...+ ...+|+|.+...........|.+|+++++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999998543 357888887654444455678899999999999999999999999999999999999999
Q ss_pred hhhhhcccCCC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce-
Q 007073 378 VAYRLREIKPG-EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV- 455 (619)
Q Consensus 378 L~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~- 455 (619)
|.+++...... ....++.....++.|++.|++|||++ +|+||||||+||++++++.+||+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999764432 22356778889999999999999999 99999999999999999999999999987543222111
Q ss_pred eeeccccccccccccccC-------CCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 456 TTQVRGTMGHIAPEYLST-------GKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
.....++..|+|||++.. ..++.++|||||||++|||++ |..||...... .. ........ ...
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~----~~----~~~~~~~~-~~~ 229 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE----QV----LKQVVREQ-DIK 229 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH----HH----HHHHhhcc-Ccc
Confidence 122345678999998743 356889999999999999999 77787532211 01 11111111 111
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
...+. ........+.+++..|| .||++|||+++|++.|.
T Consensus 230 ~~~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 230 LPKPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11111 12233456678888998 59999999999999873
No 195
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-36 Score=310.61 Aligned_cols=249 Identities=20% Similarity=0.305 Sum_probs=201.1
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
.+|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++|+||+++++.+......++||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 5788889999999999999996 468999999886433 33456788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++.. ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 99 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred cCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 999999998864 2378889999999999999999999 99999999999999999999999999987654322
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.. .....|++.|+|||.+.+..++.++|||||||++|+|+||+.||....... .... ......
T Consensus 171 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-------~~~~-~~~~~~-------- 233 (296)
T cd06654 171 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-------ALYL-IATNGT-------- 233 (296)
T ss_pred cc-cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-------hHHH-HhcCCC--------
Confidence 21 223458899999999998889999999999999999999999996432110 0000 000000
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.....+......+.+++.+||..+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 000112234467889999999999999999999986
No 196
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.3e-37 Score=308.60 Aligned_cols=252 Identities=24% Similarity=0.335 Sum_probs=197.4
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCC------
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTP------ 363 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~------ 363 (619)
+++.|+..+.||+|+||.||+|... +++.||+|.+... ......+.+|+.++.++ +|+||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC--CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 5667888899999999999999965 6889999998643 23456788999999988 699999999998653
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
...++||||+++++|.+++.... ...+++.....++.|++.|++|||++ +|+|+||||+||++++++.++|+|||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCC
Confidence 34789999999999999987632 23488899999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
++........ ......|+..|+|||++. ...++.++|||||||++|||++|+.||...... ... ..
T Consensus 157 ~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-------~~~-~~ 227 (272)
T cd06637 157 VSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RAL-FL 227 (272)
T ss_pred Cceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-------HHH-HH
Confidence 9986543221 223456899999999986 345788999999999999999999998532210 000 00
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... . ..... .....+..+.+++.+||+.+|.+|||+.++++
T Consensus 228 ~~~-~-----~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 228 IPR-N-----PAPRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred Hhc-C-----CCCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 000 0 00000 11123357889999999999999999999875
No 197
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5e-37 Score=316.37 Aligned_cols=241 Identities=24% Similarity=0.310 Sum_probs=190.5
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHH-ccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISV-AVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
++||+|+||.||+|... +|+.||+|.++... .......+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999975 68899999986432 12334566778888775 4899999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|..++... ..+++.....++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~i~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (316)
T cd05620 81 GDLMFHIQDK----GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NR 152 (316)
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Cc
Confidence 9999888653 2378889999999999999999999 99999999999999999999999999987532221 22
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ......... .+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~~~-------~~---- 213 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIRVD-------TP---- 213 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhC-------CC----
Confidence 33456899999999999999999999999999999999999999643211 111111100 00
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAMS-EVV 567 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl 567 (619)
..+.....++.+++.+|++.||++||++. ++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 214 HYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 11112235788999999999999999984 443
No 198
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=6.7e-37 Score=309.46 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=200.9
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
.|+..+.||+|+||.||+|... ++..||+|.+.........+.+.+|++++++++||||+++++++..+...++|+||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4566788999999999999864 578999998865444445678899999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++++|.+++.. ..+++..+..++.|+++|+.|||++ +++|+||+|+||++++++.++++|||++........
T Consensus 85 ~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 85 GGGSALDLLKP-----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 99999988853 2378889999999999999999999 999999999999999999999999999986543221
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
......|+..|+|||++.+..++.++||||||+++|||+||+.|+...... ...... ....
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~~~----------~~~~ 217 (277)
T cd06642 157 -KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--------RVLFLI----------PKNS 217 (277)
T ss_pred -hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--------hHHhhh----------hcCC
Confidence 122345788999999999989999999999999999999999998532110 000000 0000
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
........+..+.+++.+||+.+|++||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 218 PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 111222345678999999999999999999999974
No 199
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-36 Score=307.88 Aligned_cols=262 Identities=22% Similarity=0.289 Sum_probs=204.8
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC--CcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 370 (619)
++|+..+.||.|++|.||++... +++.+|+|.+...........+.+|++++++++||||+++++++... ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999975 68899999987544444567889999999999999999999988654 4678999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.........++......++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999988765444445588889999999999999999999 999999999999999999999999999875532
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
... ....++..|+|||.+.+..++.++||||+|+++|+|+||+.||+....+.........+..... ... +.
T Consensus 158 ~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~-~~ 229 (287)
T cd06621 158 SLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP----NPE-LK 229 (287)
T ss_pred ccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC----chh-hc
Confidence 211 2345788999999999999999999999999999999999999754321111112222211100 000 01
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... ......+..+.+++.+||+.+|++|||+.|+++
T Consensus 230 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 230 DEP--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred cCC--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 000 001234567899999999999999999999986
No 200
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-36 Score=324.42 Aligned_cols=264 Identities=21% Similarity=0.259 Sum_probs=196.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
....|.+.+.||+|+||.||+|.+. .++.||||... ...+.+|++++++++|+|||++++++......++||
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 3457899999999999999999975 57899999642 234578999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
|++. ++|..++... ...+++..+..++.|+++||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 240 e~~~-~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 240 PKYR-SDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EccC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 9995 6787777542 23589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccc---cchhHHHHHHHHhhh-ccc
Q 007073 451 RKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE---DDVLLLDHVKKLERE-KRL 525 (619)
Q Consensus 451 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~-~~~ 525 (619)
.... ......||..|+|||++.+..++.++|||||||++|||++|..++........ ....+...+...... ...
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 392 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEF 392 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccC
Confidence 2221 22345699999999999999999999999999999999998876532211111 111111111111000 000
Q ss_pred ch---------hcc---ccccCCCC-------HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 526 DA---------IVD---RNLNKNYN-------IQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 526 ~~---------~~~---~~l~~~~~-------~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.. ... ........ ......+.+|+.+|++.||++|||+.|+++.
T Consensus 393 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 393 PQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 000 00000000 0122468899999999999999999999863
No 201
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.7e-37 Score=328.00 Aligned_cols=252 Identities=20% Similarity=0.234 Sum_probs=194.6
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
+|++.+.||+|+||.||+|... +|+.||||.+.+.. .......+.+|++++++++|+||+++++.+..++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888999999999999999964 68999999986421 12234668899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|+|.+++... ..++......++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|..+...
T Consensus 82 ~~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 82 YIPGGDMMSLLIRL----GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred CCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 99999999998753 2378888889999999999999999 9999999999999999999999999997532100
Q ss_pred C------------------------------------------cceeeeccccccccccccccCCCCCcchhhHHHHHHH
Q 007073 452 K------------------------------------------TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIML 489 (619)
Q Consensus 452 ~------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l 489 (619)
. ........||+.|+|||++.+..++.++|||||||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 0 0001134699999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCC---CHHHH
Q 007073 490 LELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP---AMSEV 566 (619)
Q Consensus 490 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s~~ev 566 (619)
|||+||+.||....... .......... . .........+..+.+++.+|+ .+|.+|+ ++.++
T Consensus 235 yell~G~~Pf~~~~~~~--------~~~~i~~~~~--~-----~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 235 YEMLVGQPPFLADTPAE--------TQLKVINWET--T-----LHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred eehhhCCCCCCCCCHHH--------HHHHHhccCc--c-----ccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 99999999997533211 1111100000 0 000001122345677777766 5999999 77887
Q ss_pred HHH
Q 007073 567 VRM 569 (619)
Q Consensus 567 l~~ 569 (619)
++.
T Consensus 299 l~h 301 (376)
T cd05598 299 KAH 301 (376)
T ss_pred hCC
Confidence 743
No 202
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.4e-37 Score=327.49 Aligned_cols=251 Identities=21% Similarity=0.232 Sum_probs=192.4
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.|+..+.||+|+||+||+|... +++.||+|.+.... .......+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999964 68899999986422 12345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|+|.+++... ..++......++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIRM----GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 99999999988753 2377888889999999999999999 9999999999999999999999999997532100
Q ss_pred C----------------------------------------------cceeeeccccccccccccccCCCCCcchhhHHH
Q 007073 452 K----------------------------------------------TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGY 485 (619)
Q Consensus 452 ~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~ 485 (619)
. ........||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 000112468999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC---
Q 007073 486 GIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA--- 562 (619)
Q Consensus 486 Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs--- 562 (619)
||++|||+||+.||...... ......... ..............+..+++.+++ .+|++|++
T Consensus 235 Gvil~elltG~~Pf~~~~~~--------~~~~~i~~~-------~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~ 298 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPL--------ETQMKVINW-------QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNG 298 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHH--------HHHHHHHcc-------CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCC
Confidence 99999999999999643211 001111100 000000001122345667777765 49999997
Q ss_pred HHHHHH
Q 007073 563 MSEVVR 568 (619)
Q Consensus 563 ~~evl~ 568 (619)
+.++++
T Consensus 299 ~~ei~~ 304 (382)
T cd05625 299 ADEIKA 304 (382)
T ss_pred HHHHhc
Confidence 666653
No 203
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.6e-36 Score=302.54 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=203.3
Q ss_pred hcCCcccCccccCCCceEEEEEeCC-CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|+..+.||+|+||.||+|...+ ++.||+|.+.... ..+.+.+|++++++++|+||+++++++......++++|
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE---DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH---HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 3678889999999999999999864 7899999986432 26789999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++... ...+++.....++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 79 YCGAGSVSDIMKIT---NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred cCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 99999999998653 24489999999999999999999999 9999999999999999999999999999876433
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.. ......|+..|+|||.+.+..++.++||||||+++|+|+||+.||........ .... .. ....
T Consensus 153 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~--------~~~~-~~-----~~~~ 217 (256)
T cd06612 153 MA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA--------IFMI-PN-----KPPP 217 (256)
T ss_pred cc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh--------hhhh-cc-----CCCC
Confidence 22 22334578899999999988999999999999999999999999864321100 0000 00 0000
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
....+......+.+++.+||+.+|++|||+.++++
T Consensus 218 --~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 218 --TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred --CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00112234467899999999999999999999985
No 204
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.5e-37 Score=318.63 Aligned_cols=243 Identities=23% Similarity=0.244 Sum_probs=190.3
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHH-HHHHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVE-MISVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||+||+|... +|+.||+|++.... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999975 68999999986422 1223344555555 46789999999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|..++... ..+++.....++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (323)
T cd05575 81 GELFFHLQRE----RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKT 152 (323)
T ss_pred CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCc
Confidence 9999888753 3478888999999999999999999 9999999999999999999999999998753221 122
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... +....... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~---------~~~-- 213 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA--------EMYDNILN---------KPL-- 213 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH--------HHHHHHHc---------CCC--
Confidence 33456899999999999999999999999999999999999999643211 11111111 000
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
...+..+..+.+++.+|++.||++||++.+.+..
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (323)
T cd05575 214 RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLE 247 (323)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHH
Confidence 0111224678899999999999999998644433
No 205
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.4e-37 Score=310.07 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=198.6
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.|+..+.||+|+||.||++... +++.||||.+..... ......+.+|+.++++++|+|++++++.+...+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3667789999999999999965 689999999864322 2223567789999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++.... ...++...+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 81 LMNGGDLKFHIYHMG--EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred ecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 999999999886432 23488899999999999999999999 9999999999999999999999999998765432
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.. .....|+..|+|||.+.+..++.++|||||||++|||++|+.||......... ........ ..
T Consensus 156 ~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-----~~~~~~~~-----~~--- 220 (285)
T cd05630 156 QT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-----EEVERLVK-----EV--- 220 (285)
T ss_pred cc--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-----HHHHhhhh-----hh---
Confidence 21 22346899999999999999999999999999999999999999643211000 00000000 00
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPA-----MSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~ 568 (619)
...+......++.+++.+||+.||++||| ++|+++
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 221 --QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred --hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 00111223356889999999999999999 777764
No 206
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=9.8e-37 Score=316.30 Aligned_cols=256 Identities=20% Similarity=0.237 Sum_probs=196.3
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC--CCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||.||++... +++.||+|.+.+. ......+.+.+|+.++..++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888999999999999999965 6899999998642 12234466889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++... ...++...+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 999999999998653 23478888999999999999999999 999999999999999999999999999976654
Q ss_pred CCcceeeeccccccccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
..........||+.|+|||++.. ..++.++|||||||++|||++|+.||...... +...........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~--------~~~~~i~~~~~~ 226 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--------ETYGKIMNHKEH 226 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH--------HHHHHHHcCCCc
Confidence 33333333468999999999863 45788999999999999999999999643211 111111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCC--CCCCHHHHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPE--DRPAMSEVVRM 569 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~--~RPs~~evl~~ 569 (619)
..+. ......+..+.+++.+|+..+++ .||++.++++.
T Consensus 227 ~~~~------~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 227 FQFP------PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ccCC------CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0000 01112345677888887755333 37888888754
No 207
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.1e-36 Score=304.65 Aligned_cols=249 Identities=24% Similarity=0.336 Sum_probs=204.1
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
..|+..+.||+|+||.||+|.+. ++..||+|.+...........+.+|+.++++++|+||+++++++..+...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 34667789999999999999975 58899999986544445567889999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++.. ..++......++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 84 LGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 999999998864 2377888899999999999999999 99999999999999999999999999997664332
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
. ......++..|+|||.+.+..++.++|||||||++|||+||+.||....... .... ....
T Consensus 156 ~-~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~----------~~~~ 216 (277)
T cd06640 156 I-KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--------VLFL----------IPKN 216 (277)
T ss_pred c-ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--------Hhhh----------hhcC
Confidence 2 2233457889999999998889999999999999999999999986422110 0000 0111
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.........+..+.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 217 NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 1122344566789999999999999999999999754
No 208
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.8e-36 Score=307.52 Aligned_cols=264 Identities=20% Similarity=0.288 Sum_probs=197.8
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|+..+.||+|++|.||+|... +|..||+|.+.... .......+.+|+.++++++||||+++++++..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999975 68999999986432 223456788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
++ ++|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 578887765432 34588999999999999999999999 99999999999999999999999999998654322
Q ss_pred cceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh----------
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER---------- 521 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 521 (619)
.......+++.|+|||.+.+. .++.++||||||+++|||+||+.||........ ..........
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 230 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ----LFRIFRILGTPTEDVWPGVT 230 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHHHhCCCChhhhhcch
Confidence 122233578899999988654 578999999999999999999999864321110 0000000000
Q ss_pred -hcccchhcccccc---CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 -EKRLDAIVDRNLN---KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 -~~~~~~~~~~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
............. .......+.++.+++.+||+.||++|||+.+|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000000 0001123457789999999999999999999875
No 209
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-37 Score=305.28 Aligned_cols=261 Identities=24% Similarity=0.335 Sum_probs=201.4
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHH--HccCCCccceeeeeeCCC---
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMIS--VAVHRNLLRLIGFCTTPT--- 364 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~--~l~H~niv~l~~~~~~~~--- 364 (619)
.....+..+.+.||+|.||.||+|.|+ |..||||++.. ..++.+.+|.++++ .++|+||+.+++.-..++
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s----rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS----RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred HhhhheeEEEEEecCccccceeecccc-CCceEEEEecc----cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 345567788999999999999999996 89999999853 34678889999987 468999999998876553
Q ss_pred -cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-----cCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 365 -ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-----HCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 365 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-----~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
..+||.+|.++|||.++|.. ..++....++++..+|.||+|||. +.+|.|.|||||+.|||+..++.+.
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred EEEEEeeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 47899999999999999986 338899999999999999999996 3578999999999999999999999
Q ss_pred EcccccceeeccCCcc---eeeeccccccccccccccCCC----C--CcchhhHHHHHHHHHHHhCC----------CCC
Q 007073 439 VGDFGLAKLVDVRKTN---VTTQVRGTMGHIAPEYLSTGK----S--SERTDVFGYGIMLLELVTGQ----------RAI 499 (619)
Q Consensus 439 l~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~----~--~~~~Dv~S~Gv~l~elltg~----------~p~ 499 (619)
|+|+|+|......... .....+||.+|||||++...- + -..+||||||.|+||+.-.. .||
T Consensus 357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 9999999876543221 233457999999999995431 1 24689999999999987632 343
Q ss_pred CCCccccccchhHHHHHHHHhhhcccch-hccccccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 500 DFSRLEEEDDVLLLDHVKKLEREKRLDA-IVDRNLNKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...- ..-+.-+.+.+ +-.+.+++.. .......+.++|+.||..+|.-|-|+--+-+.|.++
T Consensus 437 yd~V-------------p~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 437 YDVV-------------PSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred ccCC-------------CCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 3211 11111111111 1122233222 356678899999999999999999999988888764
No 210
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.8e-36 Score=301.01 Aligned_cols=252 Identities=30% Similarity=0.480 Sum_probs=202.6
Q ss_pred CcccCccccCCCceEEEEEeCC-----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 296 FSEKNVLGQGGFGKVYRGVLAD-----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
+++.+.||+|+||.||++.+.+ +..||+|++.........+.+..|++++..++|+||+++++++...+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567889999999999999753 48899999976544446778999999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++...... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++....
T Consensus 81 e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPK--ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhhhc--cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 999999999998763321 178999999999999999999999 999999999999999999999999999987654
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
..........++..|+|||.+.+..++.++||||+|+++|||++ |..||..... . ...........
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-----~---~~~~~~~~~~~----- 222 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-----E---EVLEYLKKGYR----- 222 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-----H---HHHHHHhcCCC-----
Confidence 42222222346789999999988889999999999999999999 7777753211 1 11111111111
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 570 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 570 (619)
.......+..+.+++.+|++.+|++|||+.++++.|
T Consensus 223 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 -----LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011122456789999999999999999999998864
No 211
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.1e-36 Score=306.67 Aligned_cols=254 Identities=21% Similarity=0.305 Sum_probs=196.2
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHH-HHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEM-ISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|++.+.||+|+||.||+|... +|+.||+|++...........+..|+.. ++..+||||+++++++..+...+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888899999999999999975 6999999998754333344566667765 567789999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|++ |+|.+++.........+++..+..++.|++.||+|||+++ +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 997 5787777654444456899999999999999999999853 7999999999999999999999999999865322
Q ss_pred CcceeeeccccccccccccccC----CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 452 KTNVTTQVRGTMGHIAPEYLST----GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
. ......|+..|+|||.+.+ ..++.++|+|||||++|||++|+.||...... .+......... .
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~-~-- 225 (283)
T cd06617 158 V--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-------FQQLKQVVEEP-S-- 225 (283)
T ss_pred c--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-------HHHHHHHHhcC-C--
Confidence 1 1223457889999998864 45689999999999999999999998532110 00111110000 0
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. .......+.++.+++.+||+.+|++||++.++++
T Consensus 226 ---~---~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 ---P---QLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ---C---CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0001123467899999999999999999999985
No 212
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.5e-36 Score=302.74 Aligned_cols=240 Identities=23% Similarity=0.349 Sum_probs=186.9
Q ss_pred CccccCCCceEEEEEeCC-------------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 300 NVLGQGGFGKVYRGVLAD-------------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~-------------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
+.||+|+||.||+|.+.+ ...||+|.+.... ......|.+|+.+++.++||||+++++++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 468999999999998532 2358889875432 33456788899999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc-------EEE
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-------AVV 439 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-------~kl 439 (619)
++||||+++|+|..++... ...+++..+.+++.|+++||+|||++ +|+||||||+|||++.++. +++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRK---SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 9999999999998887642 23488899999999999999999999 9999999999999986654 899
Q ss_pred cccccceeeccCCcceeeecccccccccccccc-CCCCCcchhhHHHHHHHHHHH-hCCCCCCCCccccccchhHHHHHH
Q 007073 440 GDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS-TGKSSERTDVFGYGIMLLELV-TGQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 440 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~S~Gv~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
+|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..|+......+ . .
T Consensus 154 ~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--------~-~ 219 (262)
T cd05077 154 SDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--------K-E 219 (262)
T ss_pred CCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--------H-H
Confidence 999998754321 2345788999999886 466899999999999999998 5787775322110 0 0
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
..... .. . .......++.+++.+||+.||++||++.+|++.++
T Consensus 220 ~~~~~-~~--------~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 220 RFYEG-QC--------M--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHhc-Cc--------c--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 10000 00 0 01112357889999999999999999999998763
No 213
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.2e-36 Score=309.28 Aligned_cols=262 Identities=23% Similarity=0.317 Sum_probs=192.7
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHc---cCCCccceeeeeeCC-----C
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVA---VHRNLLRLIGFCTTP-----T 364 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~-----~ 364 (619)
+|++.+.||+|+||+||+|... +|+.||+|.++.... ......+.+|+++++.+ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999975 689999998864322 22234566777776655 699999999988642 3
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||||+++ +|..++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 46899999985 78777765332 3488999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE-- 522 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 522 (619)
++...... ......||..|+|||.+.+..++.++||||+||++|||++|+.||....... .+..........
T Consensus 155 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~----~~~~~~~~~~~~~~ 228 (288)
T cd07863 155 ARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD----QLGKIFDLIGLPPE 228 (288)
T ss_pred cccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH----HHHHHHHHhCCCCh
Confidence 98664322 2233468899999999998899999999999999999999999986432111 111111110000
Q ss_pred -cccch--hcccccc-------CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 -KRLDA--IVDRNLN-------KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 -~~~~~--~~~~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..... ....... ....+.....+.+++.+|++.||++|||+.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000 0000000 0011233457789999999999999999999874
No 214
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.6e-36 Score=310.67 Aligned_cols=262 Identities=23% Similarity=0.333 Sum_probs=198.4
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|...+.||+|+||.||+|... +++.||+|.+...........+.+|+.+++.++||||+++++++..+...++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56888999999999999999975 68899999986544444456678899999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
++ ++|..++... ...+++.....++.|+++||+|||+. +|+|+||||+||+++.++.+||+|||++.......
T Consensus 86 ~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 86 LD-KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 97 4888777653 23478889999999999999999999 99999999999999999999999999997643322
Q ss_pred cceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh---hhcccchh
Q 007073 453 TNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE---REKRLDAI 528 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 528 (619)
. ......+++.|+|||.+.+ ..++.++|||||||++|||+||+.||........ ........ .......+
T Consensus 159 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 159 K-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ-----LHFIFRILGTPTEETWPGI 232 (301)
T ss_pred C-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHHHcCCCChhhchhh
Confidence 1 1223357889999998865 4578999999999999999999999975432110 11111000 00000000
Q ss_pred cc---------ccccC----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VD---------RNLNK----NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~---------~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. +.... ......+..+.+++.+|++.||.+|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 00000 001123456789999999999999999999885
No 215
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.9e-36 Score=300.98 Aligned_cols=251 Identities=22% Similarity=0.295 Sum_probs=204.6
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|+..+.||+|+||.||.+.. .+++.+++|.+.... .......+.+|++++++++|+||+++++++...+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999985 468999999886432 344567788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++.... ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999987643 34578999999999999999999999 99999999999999999999999999998764433
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... +....... +.
T Consensus 156 ~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--------~~~~~~~~-~~-------- 217 (256)
T cd08221 156 S-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL--------NLVVKIVQ-GN-------- 217 (256)
T ss_pred c-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHc-CC--------
Confidence 2 223456899999999998888999999999999999999999998642211 11111111 11
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.. ......+.++.+++.+||+.+|++||++.++++.
T Consensus 218 ~~-~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 218 YT-PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CC-CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 11 1112334678899999999999999999999875
No 216
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.4e-36 Score=301.35 Aligned_cols=247 Identities=28% Similarity=0.430 Sum_probs=198.6
Q ss_pred cCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
++|.+.+.||+|+||.||++.. +++.||+|..+.. .....+.+|+.++++++|||++++++++... ..++||||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD---VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc---chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 5688899999999999999986 6788999988542 2356789999999999999999999988654 578999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++++|.+++.... ...+++..+.+++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-- 153 (254)
T cd05083 81 SKGNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-- 153 (254)
T ss_pred CCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc--
Confidence 9999999987532 23478899999999999999999998 9999999999999999999999999998754321
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
......+..|+|||.+.+..++.++||||||+++|||++ |+.||...... ..........
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~--------- 214 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--------EVKECVEKGY--------- 214 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--------HHHHHHhCCC---------
Confidence 112234568999999998899999999999999999998 89888643221 1111111110
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
........+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 215 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 215 -RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 111122334678899999999999999999999999875
No 217
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.8e-36 Score=307.68 Aligned_cols=247 Identities=23% Similarity=0.326 Sum_probs=195.4
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
|+..+.||+|+||+||+|.+. +++.||+|.+.... .......+.+|++++++++|+|++++.+++...+..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999974 68999999986432 122345678899999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++.... ...+++.....++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMG--NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 99999998886532 23489999999999999999999999 99999999999999999999999999997654322
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
. .....|+..|+|||.+.+..++.++|+||||+++|||+||+.||........ .......... ..
T Consensus 157 ~--~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~----~~~~~~~~~~-~~-------- 221 (285)
T cd05632 157 S--IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK----REEVDRRVLE-TE-------- 221 (285)
T ss_pred c--ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHhhhc-cc--------
Confidence 1 2334689999999999988999999999999999999999999964321100 0001111100 00
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMS 564 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 564 (619)
..+.......+.+++..|++.||++||++.
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 222 --EVYSAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred --cccCccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 011222345778999999999999999954
No 218
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.6e-36 Score=303.57 Aligned_cols=258 Identities=21% Similarity=0.295 Sum_probs=199.9
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
++.+++++.....||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.+++.++|+||+++++++..++..+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD-SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC-HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 3456667777789999999999999964 67889999886433 334567899999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-CCcEEEcccccce
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-DFEAVVGDFGLAK 446 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~ 446 (619)
+|+||+++++|.+++..... ....+...+..++.|++.||+|||++ +|+||||||+||+++. ++.++|+|||++.
T Consensus 82 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEecCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999999875321 11127778888999999999999999 9999999999999986 6799999999997
Q ss_pred eeccCCcceeeeccccccccccccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGK--SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
....... ......|+..|+|||++.+.. ++.++||||||+++|+|++|+.||........ ..+..... .
T Consensus 158 ~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-----~~~~~~~~---~ 228 (268)
T cd06624 158 RLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-----AMFKVGMF---K 228 (268)
T ss_pred ecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-----hHhhhhhh---c
Confidence 6543222 122345789999999986644 78999999999999999999999863221100 00000000 0
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.....+.....++.+++.+||+.+|++|||+.++++
T Consensus 229 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 229 --------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred --------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 001122233467889999999999999999999875
No 219
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.5e-36 Score=304.75 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=199.8
Q ss_pred CCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCC-----cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFES-----PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
+|...+.||+|+||.||+|...+|+.+|+|.+..... ......+.+|++++++++|+||+++++++...+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4677899999999999999988899999998863321 12235688999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+||+++++|.+++.... .+++.....++.|++.||+|||+. +|+|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNRFG----PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 99999999999986532 378888899999999999999999 99999999999999999999999999987653
Q ss_pred cCC-----cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 450 VRK-----TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 450 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
... ........|+..|+|||.+.+..++.++||||||+++|||+||+.||....... ...........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~ 226 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-------AMFYIGAHRGL 226 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-------HHHHhhhccCC
Confidence 211 111223458899999999998889999999999999999999999996422100 00000000000
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ...+......+.+++.+||+.+|++||++.++++
T Consensus 227 ~---------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 M---------PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred C---------CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 1112233467899999999999999999999875
No 220
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.2e-36 Score=316.20 Aligned_cols=266 Identities=20% Similarity=0.262 Sum_probs=195.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC-----
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT----- 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 364 (619)
..++|...+.||+|+||.||++... +|..||||++.... .......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999964 68999999986432 2334567889999999999999999999886543
Q ss_pred -cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 365 -ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 365 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
..++||||+++ ++...+.. .++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 46899999976 45554432 267788889999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccccc----------chhHH
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEED----------DVLLL 513 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~----------~~~~~ 513 (619)
+++..... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||......... .....
T Consensus 169 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 169 LARTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred CccccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 99754322 1223456899999999999999999999999999999999999999743211000 00000
Q ss_pred HH----HHHHhh-hccc-----chhcccccc---CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 514 DH----VKKLER-EKRL-----DAIVDRNLN---KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 514 ~~----~~~~~~-~~~~-----~~~~~~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.. ...... .... .+....... ..........+.+++.+|++.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 000000 0000 000000000 00011123568899999999999999999999863
No 221
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.4e-36 Score=309.66 Aligned_cols=197 Identities=22% Similarity=0.324 Sum_probs=159.9
Q ss_pred cCccccCCCceEEEEEeC---CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC--CCcceeEeccc
Q 007073 299 KNVLGQGGFGKVYRGVLA---DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT--PTERLLVYPFM 373 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~~ 373 (619)
.++||+|+||+||+|... +++.||+|.+.... ....+.+|++++++++||||+++++++.. ....+++|||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC---CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 468999999999999964 46789999986432 23557889999999999999999998854 34578999998
Q ss_pred ccchhhhhhcccCC-----CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEEEccccc
Q 007073 374 QNLSVAYRLREIKP-----GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL----DEDFEAVVGDFGL 444 (619)
Q Consensus 374 ~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGl 444 (619)
.+ +|..++..... ....++......++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 83 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 65 77666643211 123488889999999999999999999 99999999999999 4567899999999
Q ss_pred ceeeccCCc--ceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 445 AKLVDVRKT--NVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 445 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
++....... .......||+.|+|||++.+ ..++.++||||+||++|||+||+.||...
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 987643221 12234568999999999876 45899999999999999999999999643
No 222
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.8e-36 Score=302.99 Aligned_cols=249 Identities=22% Similarity=0.384 Sum_probs=199.3
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcc--------hHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPG--------GDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
+|.+.+.||+|+||.||+|... +++.||+|.+....... ..+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3677889999999999999964 68899999886432211 22568889999999999999999999999999
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++|+||+++++|.+++... ..+++.....++.|++.||+|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY----GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCC
Confidence 99999999999999999753 2378888999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc-----eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh
Q 007073 446 KLVDVRKTN-----VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 446 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
+........ ......|+..|+|||.+.+..++.++||||||+++|+|+||+.||...... ..+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~ 225 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL--------QAIFKIG 225 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH--------HHHHHHh
Confidence 876422111 111235788999999999888999999999999999999999999642110 0011100
Q ss_pred hhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 521 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ......+...+..+.+++.+||+.+|++||++.++++
T Consensus 226 ~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 226 E----------NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred c----------cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0 0111122334567899999999999999999999875
No 223
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.9e-36 Score=303.88 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=204.4
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|+..+.||+|+||.||++... +++.||+|++...........+.+|++++++++||||+++++++......++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35777889999999999999976 68999999987654445667889999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
+++++|.+++.... ..++......++.|++.|++|||+ . +++|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 81 MDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred cCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 99999999987643 347888899999999999999999 7 9999999999999999999999999998765322
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
... ...++..|+|||.+.+..++.++||||||+++|+|++|+.||........ ...+.........
T Consensus 155 ~~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~-------- 220 (265)
T cd06605 155 LAK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD---GIFELLQYIVNEP-------- 220 (265)
T ss_pred Hhh---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc---cHHHHHHHHhcCC--------
Confidence 211 15688899999999999999999999999999999999999864321111 1111111111110
Q ss_pred cccCCCCH-HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNI-QEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ..... .....+.+++.+||..+|++|||+.+++.
T Consensus 221 -~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 221 -P-PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -C-CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 0 01111 14567899999999999999999999874
No 224
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=5.6e-37 Score=317.42 Aligned_cols=251 Identities=23% Similarity=0.257 Sum_probs=195.7
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHH-HHHHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVE-MISVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||.||+|... +|+.||+|++.... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999964 68999999986432 2233445566665 46779999999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|..++... ..+++.....++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~ 152 (325)
T cd05604 81 GELFFHLQRE----RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDT 152 (325)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCC
Confidence 9998888643 3488899999999999999999999 9999999999999999999999999998753221 122
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... +....... ..+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~~~~---------~~~-- 213 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--------EMYDNILH---------KPL-- 213 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--------HHHHHHHc---------CCc--
Confidence 33456899999999999999999999999999999999999999643211 11111111 000
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCccc
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAE 577 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 577 (619)
...+.....+.+++.+|++.+|.+||++.+.++.+....+..
T Consensus 214 ~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~ 255 (325)
T cd05604 214 VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFE 255 (325)
T ss_pred cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcC
Confidence 011123456789999999999999999876666665554443
No 225
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.6e-37 Score=317.44 Aligned_cols=248 Identities=22% Similarity=0.232 Sum_probs=192.5
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHH-HHHHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVE-MISVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||+||+|... +++.||+|++.... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999975 57889999986422 1222334444544 56788999999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|.+.+... ..+.......++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~ 152 (325)
T cd05602 81 GELFYHLQRE----RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GT 152 (325)
T ss_pred CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CC
Confidence 9999988753 2367778888999999999999999 99999999999999999999999999997542221 22
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ......... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~---------~~-- 213 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILNK---------PL-- 213 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--------HHHHHHHhC---------Cc--
Confidence 33456999999999999999999999999999999999999999643211 111111110 00
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
...+.....+.+++.+|++.+|.+||++.+.+..+.+..
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~ 252 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHI 252 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCc
Confidence 111223457889999999999999999886665555543
No 226
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.6e-36 Score=308.08 Aligned_cols=261 Identities=23% Similarity=0.307 Sum_probs=201.9
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeee---
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCT--- 361 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~--- 361 (619)
+.+..+.++|++.+.||+|+||.||++... +++.+|+|.+... ......+..|+.+++++ +||||+++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI--HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc--cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 445557789999999999999999999964 6889999987542 22346788899999998 6999999999874
Q ss_pred --CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEE
Q 007073 362 --TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVV 439 (619)
Q Consensus 362 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 439 (619)
..+..++||||+++++|.++++........+++..+..++.|+++||.|||+. +++||||||+||+++.++.+||
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEE
Confidence 33457999999999999998865433345688889999999999999999999 9999999999999999999999
Q ss_pred cccccceeeccCCcceeeeccccccccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007073 440 GDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 440 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 514 (619)
+|||+++....... ......|+..|+|||++.. ..++.++|||||||++|||+||+.||.......
T Consensus 166 ~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~-------- 236 (286)
T cd06638 166 VDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR-------- 236 (286)
T ss_pred ccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH--------
Confidence 99999987643322 1223468999999998853 457899999999999999999999986432110
Q ss_pred HHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 515 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
........ ......+ +......+.+++.+||+.+|++|||+.|+++.
T Consensus 237 ~~~~~~~~-~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 237 ALFKIPRN-PPPTLHQ-------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HHhhcccc-CCCcccC-------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00000000 0000001 11123468899999999999999999999864
No 227
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.5e-37 Score=316.94 Aligned_cols=238 Identities=23% Similarity=0.252 Sum_probs=187.4
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHH-HHHHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVE-MISVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
++||+|+||.||+|... +|+.||+|++.... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 68899999986422 1223345555655 57889999999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|...+... ..++......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (321)
T cd05603 81 GELFFHLQRE----RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EET 152 (321)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-CCc
Confidence 9998887642 3377888889999999999999999 9999999999999999999999999998753221 122
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ........ ....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~---------~~~~-- 213 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--------SQMYDNIL---------HKPL-- 213 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--------HHHHHHHh---------cCCC--
Confidence 3345689999999999988999999999999999999999999964321 11111111 1100
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAMS 564 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 564 (619)
..+......+.+++.+|++.+|++||++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11223345788999999999999999864
No 228
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.2e-36 Score=314.53 Aligned_cols=243 Identities=23% Similarity=0.296 Sum_probs=193.1
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeEe
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 370 (619)
+|+..+.||+|+||+||+|... +|+.||+|++.... .....+.+..|..+++.+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999965 68999999986422 2334456788999988886 577888999999989999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~~----~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQV----GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 999999999988653 2388999999999999999999999 999999999999999999999999999875432
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.. .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ........
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~--------- 215 (323)
T cd05615 154 DG-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--------ELFQSIME--------- 215 (323)
T ss_pred CC-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHh---------
Confidence 22 1223456899999999999989999999999999999999999999643211 11111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMS 564 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 564 (619)
... .++...+..+.+++.+|++.+|++|++..
T Consensus 216 ~~~--~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 216 HNV--SYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred CCC--CCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 000 11222345778999999999999999853
No 229
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.5e-36 Score=316.61 Aligned_cols=266 Identities=20% Similarity=0.245 Sum_probs=196.1
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC------
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------ 363 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 363 (619)
..++|...+.||+|+||.||++... .++.||||++.... .......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999964 68899999986533 233456778899999999999999999988543
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
...++||||+++ ++...+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 246899999976 55555532 277888899999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH-------HH-
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL-------DH- 515 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~-------~~- 515 (619)
+++..... .......||..|+|||.+.+..++.++|||||||++|||++|+.||.............. ..
T Consensus 165 ~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 165 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99865322 222345689999999999998999999999999999999999999964322110000000 00
Q ss_pred ------HHHH-hhhcccchhcccc-----cc---CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 516 ------VKKL-EREKRLDAIVDRN-----LN---KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 516 ------~~~~-~~~~~~~~~~~~~-----l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
+... ...........+. .. ..........+.+++.+|++.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000 0000000000000 00 00111223577899999999999999999999864
No 230
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.6e-36 Score=306.52 Aligned_cols=250 Identities=20% Similarity=0.306 Sum_probs=202.1
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
..+|...+.||+|+||.||+|.. .+|+.||+|.+.... ....+.+.+|+.+++.++|+||+++++++...+..++|||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence 36788899999999999999996 479999999986433 3345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++.. ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 97 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 97 YLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred ccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 9999999998864 2368888999999999999999999 9999999999999999999999999999865433
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
... .....+++.|+|||.+.+..++.++|||||||++|+|+||+.||......... . .. ....
T Consensus 169 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~---~-----~~--------~~~~ 231 (297)
T cd06656 169 QSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL---Y-----LI--------ATNG 231 (297)
T ss_pred ccC-cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe---e-----ee--------ccCC
Confidence 222 22345888999999999888999999999999999999999999643221100 0 00 0000
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
......+......+.+++.+||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 232 TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000112233456889999999999999999999986
No 231
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.8e-36 Score=299.46 Aligned_cols=250 Identities=23% Similarity=0.330 Sum_probs=200.4
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC-cceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-ERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~e 371 (619)
+|++.+.||+|++|.||++... +++.||+|++.... .....+.+.+|++++++++|+|++++++.+...+ ..+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999965 57899999986432 2334567889999999999999999998876443 5789999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQK--GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 999999999987632 23478999999999999999999999 9999999999999999999999999999876432
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.. ......|++.|+|||.+.+..++.++||||||++++||++|+.||+..... ........ +..
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--------~~~~~~~~-~~~------ 219 (257)
T cd08223 156 CD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN--------SLVYRIIE-GKL------ 219 (257)
T ss_pred CC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHh-cCC------
Confidence 22 223445889999999999999999999999999999999999998642211 11111111 111
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+......+.+++.+|++.+|++||++.++++
T Consensus 220 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 220 ---PPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ---CCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1122334467899999999999999999999985
No 232
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-36 Score=306.06 Aligned_cols=254 Identities=20% Similarity=0.330 Sum_probs=201.2
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|++.+.||+|+||.||++... +|..||+|.++..........+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788899999999999999975 78999999886433344457889999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|..++.... ....+++..+..++.|++.||.|||+.+ +|+|+||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999988887532 1235899999999999999999999632 8999999999999999999999999998765322
Q ss_pred cceeeeccccccccccccccCCC------CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGK------SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
......++..|+|||.+.+.. ++.++|||||||++|||+||+.||...... ........
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~-------- 221 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----NIFAQLSA-------- 221 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----hHHHHHHH--------
Confidence 122345788999999985543 488999999999999999999998642211 11111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+.+.. ....+.....++.+++.+||+.+|++||++.+++.
T Consensus 222 -~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 222 -IVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred -HhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 11110 11123345678899999999999999999999986
No 233
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-36 Score=320.01 Aligned_cols=263 Identities=22% Similarity=0.278 Sum_probs=197.9
Q ss_pred HhcCCcccCccccCCCceEEEEEeC---CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA---DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
...+|.+.+.||+|+||.||++... .+..||+|.+... ..+.+|++++++++||||+++++++......++
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 3457999999999999999999853 3578999987532 235689999999999999999999998899999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
|||++. ++|..++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.++|+|||+++..
T Consensus 164 v~e~~~-~~l~~~l~~----~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 164 VMPKYK-CDLFTYVDR----SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EehhcC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 999986 577777743 23489999999999999999999999 9999999999999999999999999999765
Q ss_pred ccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc-ccc
Q 007073 449 DVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK-RLD 526 (619)
Q Consensus 449 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 526 (619)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+........... ...
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS-SSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC-cHHHHHHHHHHhccCccccC
Confidence 433222 2234569999999999999999999999999999999999999996543221 1111111111110000 000
Q ss_pred --------hh---ccccccCCC-------CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 527 --------AI---VDRNLNKNY-------NIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 527 --------~~---~~~~l~~~~-------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.. ........+ ......++.+++.+|+..||++|||+.|++..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000000000 01123567889999999999999999999864
No 234
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=312.28 Aligned_cols=251 Identities=22% Similarity=0.286 Sum_probs=211.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc--chHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcce
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP--GGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 367 (619)
..+.|++.+.||+|.||.||+++.+ +|+.+|+|.+.+.... .....+.+|+++|+++. |||||.+.+++.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 4457888899999999999999976 4999999999764432 24578899999999998 999999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC----CcEEEcccc
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED----FEAVVGDFG 443 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfG 443 (619)
+|||++.||.|.+.+... .++......++.|++.++.|||+. +|+|||+||+|+|+... +.+|++|||
T Consensus 113 lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 999999999999999875 288889999999999999999999 99999999999999643 579999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
++..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||........ ..
T Consensus 185 la~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~----~~---------- 248 (382)
T KOG0032|consen 185 LAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI----FL---------- 248 (382)
T ss_pred CceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH----HH----------
Confidence 9998765 4456677899999999999999999999999999999999999999975432111 00
Q ss_pred ccchhccc--cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 524 RLDAIVDR--NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 524 ~~~~~~~~--~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.+... .......+.......+++..|+..||.+|+|+.++++.
T Consensus 249 ---~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 249 ---AILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ---HHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11111 12223345556788999999999999999999999984
No 235
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.3e-36 Score=315.42 Aligned_cols=255 Identities=19% Similarity=0.227 Sum_probs=196.5
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|.+.+.||+|+||.||+++.. +++.||+|.+.+.. .......+.+|..++..++|+||+++++++...+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999975 67899999986421 2223456788999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKFE---DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999997532 2478888999999999999999999 999999999999999999999999999987654
Q ss_pred CCcceeeeccccccccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
..........||+.|+|||++.+ +.++.++|||||||++|||+||+.||...... +...........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~ 226 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV--------ETYGKIMNHEER 226 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH--------HHHHHHHcCCCc
Confidence 43333334569999999999875 46789999999999999999999999643211 111111111000
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPED--RPAMSEVVR 568 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~ 568 (619)
.. + .....+.+..+.+++.+|+..++++ |++++++++
T Consensus 227 ~~-----~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 227 FQ-----F-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cc-----C-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 00 0 0111123467888999998865544 456766653
No 236
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9e-36 Score=312.23 Aligned_cols=193 Identities=23% Similarity=0.330 Sum_probs=164.5
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
....+|.+.+.||+|+||.||+|... +++.||+|..... ....|+.++++++||||+++++++......++|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 44567999999999999999999975 5678999975321 235689999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+||+. ++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 136 ~e~~~-~~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 136 LPHYS-SDLYTYLTKR---SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EEccC-CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 99995 5777777542 23589999999999999999999999 99999999999999999999999999997533
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCC
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 499 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~ 499 (619)
.. .......||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus 209 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 209 VA--PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cC--cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 22 1223456899999999999999999999999999999999966554
No 237
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.7e-36 Score=314.77 Aligned_cols=256 Identities=19% Similarity=0.233 Sum_probs=196.9
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||.||++..+ +++.||+|.+.+.. .......+..|+.++..++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999975 57889999985321 1223455788999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 ey~~~g~L~~~l~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKFE---DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 9999999999997532 2478888999999999999999999 999999999999999999999999999976543
Q ss_pred CCcceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
..........||+.|+|||++. ...++.++|||||||++|||++|+.||..... .+...........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~ 226 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNHKER 226 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH--------HHHHHHHhCCCcc
Confidence 3333333456999999999986 34678999999999999999999999964321 1111111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPED--RPAMSEVVRM 569 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 569 (619)
.. . .......+..+.+++.+|+..++++ ||++.++++.
T Consensus 227 ~~-----~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 227 FQ-----F-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cc-----C-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00 0 0111223457788888888655444 6888888754
No 238
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=8.7e-36 Score=302.51 Aligned_cols=263 Identities=22% Similarity=0.287 Sum_probs=200.3
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|+..+.||+|+||.||+|... +|+.||+|++..... ....+.+.+|+.++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999976 689999998864332 2334668899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|++++++....... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKNP----RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 99999888776542 2388999999999999999999999 9999999999999999999999999999876543
Q ss_pred CcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh----------
Q 007073 452 KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE---------- 520 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 520 (619)
.. ......++..|+|||.+.+ ..++.++||||||+++|||+||+.||......+. .........
T Consensus 154 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 154 GD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ----LYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred cc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCCChHHhhhc
Confidence 22 2223457889999999876 5578999999999999999999999964322110 101110000
Q ss_pred -hhcccchhccccccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 521 -REKRLDAIVDRNLNKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 521 -~~~~~~~~~~~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..........+...... ....+..+.+++.+||+.+|++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00000000000000000 1123467889999999999999999999875
No 239
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=5e-36 Score=301.18 Aligned_cols=250 Identities=23% Similarity=0.341 Sum_probs=194.1
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC----CcchHHHHHHHHHHHHHccCCCccceeeeeeCC--Ccc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE----SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TER 366 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 366 (619)
.+|...+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888999999999999999964 68999999885322 122345688899999999999999999988653 456
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++++||+++++|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG----ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 78999999999999987532 378888899999999999999998 99999999999999999999999999997
Q ss_pred eeccCC--cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 447 LVDVRK--TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 447 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
...... ........++..|+|||.+.+..++.++|||||||++|||+||+.||...... .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~--------~~~~~~~~~-- 224 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM--------AAIFKIATQ-- 224 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH--------HHHHHHhcC--
Confidence 653211 11112345788999999999888999999999999999999999998632110 111111100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
......+......+.+++ +||..+|++||+++||++
T Consensus 225 -------~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 225 -------PTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -------CCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 001122223345566666 688899999999999975
No 240
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2e-36 Score=313.56 Aligned_cols=262 Identities=18% Similarity=0.236 Sum_probs=193.0
Q ss_pred ccCccccC--CCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 298 EKNVLGQG--GFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 298 ~~~~lg~G--~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
+.++||+| +|++||++..+ +|+.||+|++..... ....+.+.+|+++++.++||||+++++++..++..++|+||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 78899999964 789999999864432 233456778999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++++||+.+........
T Consensus 82 ~~~~l~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHFM--DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 99999999865322 2378899999999999999999999 999999999999999999999999986543321111
Q ss_pred c------eeeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH-Hh----
Q 007073 454 N------VTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK-LE---- 520 (619)
Q Consensus 454 ~------~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~---- 520 (619)
. ......++..|+|||++.+ ..++.++|||||||++|||+||+.||........ ....... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~ 232 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM----LLEKLNGTVPCLLD 232 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH----HHHHhcCCcccccc
Confidence 0 0112346778999999976 4589999999999999999999999964321110 0000000 00
Q ss_pred ----hhccc----------chhcc------------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 521 ----REKRL----------DAIVD------------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 521 ----~~~~~----------~~~~~------------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+.. ....+ ..............+.+++.+||+.||++|||++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00000 00000 00000112233467899999999999999999999985
No 241
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=290.45 Aligned_cols=252 Identities=22% Similarity=0.273 Sum_probs=202.5
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEecc-CCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTD-FESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++.|++.++||+|.|+.||++... +|+.+|+|.+.- .-+....+++.+|+++-+.++|||||++...+.+....++|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 456788889999999999999864 789999998752 223446788999999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEccccccee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFGLAKL 447 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGla~~ 447 (619)
|+|.|++|..-+-.. ...+....-..++||.++|.|+|.+ +|||||+||+|+++.. .--+||+|||+|..
T Consensus 90 e~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 999999998766432 3356677788999999999999999 9999999999999953 34589999999998
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
++ +.......+|||+|||||++...+|+..+|||+-||++|-++.|..||...... ..+.++...
T Consensus 163 l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~--------rlye~I~~g----- 227 (355)
T KOG0033|consen 163 VN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYEQIKAG----- 227 (355)
T ss_pred eC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH--------HHHHHHhcc-----
Confidence 87 445566778999999999999999999999999999999999999999642211 111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..| +.+...+...++..+|+.+|+..||.+|.|+.|.+.
T Consensus 228 ~yd--~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 228 AYD--YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ccC--CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 000 111122334467889999999999999999999874
No 242
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.6e-36 Score=300.58 Aligned_cols=256 Identities=20% Similarity=0.300 Sum_probs=203.7
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeC--CCcceeEe
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT--PTERLLVY 370 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ 370 (619)
+|++.+.||+|+||.||++... +|+.||+|.+.... .....+.+..|++++++++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778899999999999999964 68899999986433 33345678899999999999999999998754 34578999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC--NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||+++++|.+++.........+++.....++.|++.||.|||..+ ..+++|+||||+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999775444566899999999999999999999221 229999999999999999999999999999876
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
...... .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ....... ...
T Consensus 161 ~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~-~~~---- 226 (265)
T cd08217 161 GHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--------QLASKIK-EGK---- 226 (265)
T ss_pred cCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--------HHHHHHh-cCC----
Confidence 543321 23346899999999999988999999999999999999999998643210 1111111 011
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
....+...+..+.+++.+|++.+|++||++.+|++.
T Consensus 227 -----~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 227 -----FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -----CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 112233445688999999999999999999999863
No 243
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.9e-36 Score=299.66 Aligned_cols=238 Identities=24% Similarity=0.378 Sum_probs=188.4
Q ss_pred CccccCCCceEEEEEeCCCc-----------EEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 300 NVLGQGGFGKVYRGVLADGT-----------KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~-----------~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
+.||+|+||.||+|.+.+.. .|++|.+..... ....|.+|+.++++++||||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR--DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh--hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 46899999999999976433 578887654322 26788999999999999999999999988 77899
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-------cEEEcc
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-------EAVVGD 441 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-------~~kl~D 441 (619)
||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 78 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 78 VEEYVKFGPLDVFLHREKN---NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEEcCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCC
Confidence 9999999999999876432 488899999999999999999999 999999999999999887 799999
Q ss_pred cccceeeccCCcceeeeccccccccccccccCC--CCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHH
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG--KSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
||++..... .....++..|+|||++.+. .++.++||||||+++|||++ |..|+...... .....
T Consensus 152 fg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--------~~~~~ 218 (259)
T cd05037 152 PGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--------EKERF 218 (259)
T ss_pred CCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--------hHHHH
Confidence 999986533 2223467789999999876 78999999999999999999 46666432211 01111
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
...... .. ......+.+++.+||..+|++|||+.++++.|+
T Consensus 219 ~~~~~~---------~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 219 YQDQHR---------LP---MPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HhcCCC---------CC---CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 100000 00 001168899999999999999999999998874
No 244
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2e-36 Score=307.27 Aligned_cols=263 Identities=24% Similarity=0.346 Sum_probs=199.7
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|+..+.||+|+||.||+|.+. +++.||+|++..... ....+.+.+|+++++.++||||+++++++..++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999975 589999998865332 2245678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|++++++..+.... ..+++.....++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKYP----NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 99999888776542 2388999999999999999999999 9999999999999999999999999999866443
Q ss_pred CcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh-hccc----
Q 007073 452 KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER-EKRL---- 525 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~---- 525 (619)
.. ......++..|+|||++.+ ..++.++||||||+++|||+||+.||....... ........... ....
T Consensus 154 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 154 GE-VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID----QLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred cc-ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH----HHHHHHHHhCCCchhhHHHh
Confidence 32 2233457889999999875 457889999999999999999999886432110 00000000000 0000
Q ss_pred --chhccccccCC---------CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 --DAIVDRNLNKN---------YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 --~~~~~~~l~~~---------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+.+...... ..+..+..+.+++.+||+.+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000000 01233567899999999999999999999875
No 245
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=6.5e-37 Score=321.51 Aligned_cols=201 Identities=21% Similarity=0.285 Sum_probs=173.4
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|+..+.||+|+||.||++... +|+.||+|.+.... .......+..|+.++..++|+||+++++.+...+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999975 68999999986422 2334567888999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++... ..++......++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMKK----DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 999999999998753 2378889999999999999999999 999999999999999999999999999875432
Q ss_pred CCc----------------------------------ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCC
Q 007073 451 RKT----------------------------------NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 496 (619)
Q Consensus 451 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~ 496 (619)
... .......||+.|+|||++.+..++.++|||||||++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 110 0011346999999999999999999999999999999999999
Q ss_pred CCCCC
Q 007073 497 RAIDF 501 (619)
Q Consensus 497 ~p~~~ 501 (619)
.||..
T Consensus 234 ~Pf~~ 238 (360)
T cd05627 234 PPFCS 238 (360)
T ss_pred CCCCC
Confidence 99964
No 246
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.5e-36 Score=336.94 Aligned_cols=260 Identities=17% Similarity=0.259 Sum_probs=201.0
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeC--CC
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT--PT 364 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~ 364 (619)
.+...++|.+.+.||+|+||+||+|... ++..||+|.+.... .......|..|+.++++++|||||++++++.. ..
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 3445578999999999999999999975 57789999886432 23345678999999999999999999998754 35
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCC----CCeEecCCCCCcEEeCC-------
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN----PKIIHRDVKAANVLLDE------- 433 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~----~~ivH~Dlkp~NIll~~------- 433 (619)
..++||||+++|+|.+++.........+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 6889999999999999997654444568999999999999999999998521 25999999999999964
Q ss_pred ----------CCcEEEcccccceeeccCCcceeeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 007073 434 ----------DFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDF 501 (619)
Q Consensus 434 ----------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg~~p~~~ 501 (619)
...+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 3458999999998654322 2234568999999999854 4589999999999999999999999964
Q ss_pred CccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 502 SRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... .......+.... .+ .....+.++.+|+..||+.+|.+||++.+++.
T Consensus 246 ~~~-------~~qli~~lk~~p--------~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 ANN-------FSQLISELKRGP--------DL---PIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCc-------HHHHHHHHhcCC--------CC---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 221 111111111110 00 01122457899999999999999999999983
No 247
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.9e-36 Score=301.56 Aligned_cols=239 Identities=24% Similarity=0.321 Sum_probs=185.1
Q ss_pred ccccCCCceEEEEEeCC-------------------------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccc
Q 007073 301 VLGQGGFGKVYRGVLAD-------------------------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 355 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~~~~-------------------------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 355 (619)
.||+|+||.||+|.+.. ...||+|++.... ......|.+|+.+++.++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH-RDIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH-HHHHHHHHHHHHHHhcCCCCCeee
Confidence 69999999999997421 1358899885432 233467888999999999999999
Q ss_pred eeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 356 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 356 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
+++++......++||||+++|+|..++... ...+++..+..++.|+++||+|||++ +|+||||||+||+++..+
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKE---KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccC
Confidence 999999999999999999999999888652 23478889999999999999999999 999999999999997543
Q ss_pred -------cEEEcccccceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHH-hCCCCCCCCcccc
Q 007073 436 -------EAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELV-TGQRAIDFSRLEE 506 (619)
Q Consensus 436 -------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~ell-tg~~p~~~~~~~~ 506 (619)
.+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||.......
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred cccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 4899999988643221 12347888999998865 56899999999999999995 6888886432111
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
...... .... . +......+.+++.+||+.+|++|||+.+|++.|.
T Consensus 230 -----~~~~~~---~~~~--------~----~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 -----KERFYE---KKHR--------L----PEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred -----HHHHHH---hccC--------C----CCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 001100 0000 0 1111246889999999999999999999998873
No 248
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.4e-36 Score=313.64 Aligned_cols=266 Identities=20% Similarity=0.251 Sum_probs=195.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC------
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------ 363 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 363 (619)
..++|...+.||+|+||.||++... .++.||||++.... .......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999964 68899999986432 233456788999999999999999999987543
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
...++||||+++ ++...+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 346899999976 56555532 267888899999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH-------HHH
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL-------DHV 516 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~-------~~~ 516 (619)
+++..... .......||..|+|||++.+..++.++|||||||++|||+||+.||............+. ...
T Consensus 172 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 172 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred CccccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99865332 122345689999999999999999999999999999999999999965332110000000 000
Q ss_pred HHH--------hhhccc-----chhcccccc---CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 517 KKL--------EREKRL-----DAIVDRNLN---KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 517 ~~~--------~~~~~~-----~~~~~~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
... ...... ......... ..........+.+++.+|++.||++|||+.++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 000000 000000000 00011123578899999999999999999999863
No 249
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=8.6e-36 Score=299.20 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=205.4
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|++.+.||.|+||+||+|... ++..+|+|++.........+.+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999964 68899999987544444667899999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.++++.... ...+++.....++.|++.|++|||+. +++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999976433 23488899999999999999999999 99999999999999999999999999987664432
Q ss_pred cc---eeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 453 TN---VTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 453 ~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
.. ......|+..|+|||.+... .++.++|||||||++|||++|+.||....... ....... ..
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~----~~~~~~~----~~----- 223 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK----VLMLTLQ----ND----- 223 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh----hHHHHhc----CC-----
Confidence 22 12334588999999998877 78999999999999999999999986432110 1111110 00
Q ss_pred ccccccCCC-CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDRNLNKNY-NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+...... ....+..+.+++.+||+.||++||++.++++
T Consensus 224 -~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 -PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00010000 1234467899999999999999999999885
No 250
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=7.8e-36 Score=300.82 Aligned_cols=257 Identities=27% Similarity=0.365 Sum_probs=198.0
Q ss_pred CcccCccccCCCceEEEEEeC----CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC------
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT------ 364 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 364 (619)
|.+.+.||+|+||.||+|.+. ++..||||++.... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 556789999999999999853 36889999986432 3344667889999999999999999999886542
Q ss_pred cceeEecccccchhhhhhcccC--CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIK--PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
..+++++|+++|+|.+++.... .....+++....+++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2368899999999988875322 1223478889999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHh
Q 007073 443 GLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 443 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
|+++........ ......++..|++||.+.+..++.++||||||+++|||++ |+.||..... ... .....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-----~~~---~~~~~ 229 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-----SEI---YNYLI 229 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-----HHH---HHHHH
Confidence 999865432211 1122345678999999998889999999999999999999 8888753211 111 11111
Q ss_pred hhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 521 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..... ......+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 230 ~~~~~----------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 KGNRL----------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cCCcC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111 01122345889999999999999999999999999863
No 251
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=335.11 Aligned_cols=265 Identities=26% Similarity=0.397 Sum_probs=215.7
Q ss_pred HHHHHhcCCcccCccccCCCceEEEEEeC----C----CcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceee
Q 007073 288 ELQLATDNFSEKNVLGQGGFGKVYRGVLA----D----GTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIG 358 (619)
Q Consensus 288 el~~~~~~~~~~~~lg~G~fg~Vy~~~~~----~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~ 358 (619)
.++...++..+.+.||+|+||.|++|... . ...||||++++.......+.+..|+++++.+. |+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 45666677777789999999999999842 1 45799999998777777899999999999875 999999999
Q ss_pred eeeCCCcceeEecccccchhhhhhcccC-----CC-----C--CCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 007073 359 FCTTPTERLLVYPFMQNLSVAYRLREIK-----PG-----E--PVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKA 426 (619)
Q Consensus 359 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----~~-----~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 426 (619)
+|......++|.||++.|+|..+++... .. . ..+.......++.|||.||+||+++ ++|||||.+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhh
Confidence 9999999999999999999999998765 00 1 2388899999999999999999999 999999999
Q ss_pred CcEEeCCCCcEEEcccccceeeccCCcceeeeccc--cccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCc
Q 007073 427 ANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSR 503 (619)
Q Consensus 427 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~ 503 (619)
+|||++++..+||+|||+|+..............| ...|||||.+....|+.|+|||||||++||++| |..||....
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 99999999999999999999765544443333333 346999999999999999999999999999999 778875311
Q ss_pred cccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 504 LEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
. ..+.+..+....++. .+..+..+++++|..||+.+|++||++.++.+.++.
T Consensus 527 ~-------~~~l~~~l~~G~r~~----------~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 527 P-------TEELLEFLKEGNRME----------QPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred c-------HHHHHHHHhcCCCCC----------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 0 111122222222221 233345789999999999999999999999999988
No 252
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-36 Score=282.29 Aligned_cols=253 Identities=22% Similarity=0.326 Sum_probs=202.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC----cc---hHHHHHHHHHHHHHc-cCCCccceeeeeeC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES----PG---GDAAFQREVEMISVA-VHRNLLRLIGFCTT 362 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~----~~---~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 362 (619)
--..|...++||+|..++|-++.++ +|+.+|+|++..... +. -.++-.+|+.+++++ .||+|+.+.+++.+
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3456788899999999999999865 688999998853221 11 124556899999987 59999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
+.-.++|+|.|+.|-|.++|.+.. .++.....+|+.|+.+|++|||.+ .||||||||+|||+|++.++||+||
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V----tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV----TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe----eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 999999999999999999998744 388889999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLST------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 516 (619)
|+|+.+... ......+||++|+|||.+.. ..|+..+|+||.||++|-++.|.+||.-.. +...
T Consensus 168 GFa~~l~~G--ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-----QmlM---- 236 (411)
T KOG0599|consen 168 GFACQLEPG--EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-----QMLM---- 236 (411)
T ss_pred ceeeccCCc--hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-----HHHH----
Confidence 999977543 34556789999999998853 357889999999999999999999984210 0000
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
-++..++... ....-..+.+.+..+|+.+|++.||.+|.|++|++.
T Consensus 237 LR~ImeGkyq------F~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 237 LRMIMEGKYQ------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHhcccc------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 0111111110 111223456678999999999999999999999884
No 253
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.5e-36 Score=305.68 Aligned_cols=261 Identities=25% Similarity=0.336 Sum_probs=203.0
Q ss_pred HHHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCC
Q 007073 286 WRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTP 363 (619)
Q Consensus 286 ~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 363 (619)
..++..+.++|.+.+.||+|+||.||++... +++.+|+|.+... ......+.+|+.++.++ +|||++++++++...
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI--SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc--ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 3455556888999999999999999999974 6889999988642 22356778899999988 799999999998654
Q ss_pred -----CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 364 -----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 364 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
...++|+||+++++|.++++........+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence 357899999999999998875444445689999999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCCcceeeeccccccccccccccCC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH
Q 007073 439 VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-----KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 439 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 513 (619)
|+|||++......... .....|+..|+|||.+... .++.++|||||||++|||++|+.||......
T Consensus 169 l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-------- 239 (291)
T cd06639 169 LVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-------- 239 (291)
T ss_pred Eeecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH--------
Confidence 9999998865432211 2234588999999988643 3689999999999999999999998632210
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
......... ....+. ........+.+++.+||+.+|++||++.++++
T Consensus 240 ~~~~~~~~~-~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 240 KTLFKIPRN-PPPTLL-------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHHhcC-CCCCCC-------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 001111000 000111 11223457899999999999999999999985
No 254
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.9e-35 Score=301.22 Aligned_cols=252 Identities=22% Similarity=0.288 Sum_probs=199.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.+.|++.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|+.+++.++|+||+++++++..+...++|||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 356888999999999999999975 5889999998643 34456778899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|...+.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 90 ~~~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 90 FCPGGAVDAIMLELD---RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred cCCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 999999988775432 2488999999999999999999999 9999999999999999999999999998754322
Q ss_pred Ccceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
. .......++..|+|||++. ...++.++|||||||++|||+||+.||..... ............
T Consensus 164 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~~~~-- 232 (292)
T cd06644 164 L-QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSEP-- 232 (292)
T ss_pred c-cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH--------HHHHHHHhcCCC--
Confidence 1 1123345788999999984 34568899999999999999999999853221 011111111000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+. ...+...+.++.+++.+||+.+|++||++.++++
T Consensus 233 ----~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 233 ----PT--LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ----cc--CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 0112233457889999999999999999999875
No 255
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=7.7e-36 Score=297.93 Aligned_cols=248 Identities=25% Similarity=0.385 Sum_probs=200.3
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC----CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE----SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
+|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+.+|+.+++.++|+||+++++++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4667789999999999999976 78999999885432 123456789999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+||+++++|.+++... ..+++.....++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKKY----GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 9999999999998753 2378889999999999999999999 99999999999999999999999999988654
Q ss_pred cCCcceeeeccccccccccccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
... ......|+..|+|||.+.... ++.++|+||||+++|+|++|+.||..... .............
T Consensus 154 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~--- 220 (258)
T cd06632 154 EFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--------VAAVFKIGRSKEL--- 220 (258)
T ss_pred ccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--------HHHHHHHHhcccC---
Confidence 332 223455889999999987766 89999999999999999999999864321 0111111110111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+......+.+++.+||+.+|++||++.++++
T Consensus 221 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 ------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1112223467889999999999999999999875
No 256
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.5e-35 Score=296.58 Aligned_cols=253 Identities=21% Similarity=0.295 Sum_probs=202.5
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|++++++++||||+++++++......+++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP-GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc-hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 57888999999999999999974 57889999986433 33567889999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++.... ..++...+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 82 CGGGSLQDIYQVTR---GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred CCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 99999999887531 3488899999999999999999999 99999999999999999999999999987654321
Q ss_pred cceeeeccccccccccccccCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTG---KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.......++..|+|||.+.+. .++.++||||||+++|||+||+.||....... ....... ... .
T Consensus 156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~--------~~~~~~~-~~~---~ 222 (262)
T cd06613 156 -AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR--------ALFLISK-SNF---P 222 (262)
T ss_pred -hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHh-ccC---C
Confidence 122334678899999999776 88999999999999999999999986422110 0000000 000 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... .......+.++.+++.+||+.+|.+|||+.+|+.
T Consensus 223 ~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 223 PPK--LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred Ccc--ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0112344568899999999999999999999875
No 257
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.1e-35 Score=300.58 Aligned_cols=248 Identities=22% Similarity=0.337 Sum_probs=200.1
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc---CCCccceeeeeeCCCcceeEe
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV---HRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ 370 (619)
.|+..+.||+|+||.||+|.+ .+++.||+|.+.........+.+.+|+.++++++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467788999999999999996 4789999999875444555677889999999987 999999999999888999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.++++.. .+++.....++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 82 EYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred ecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 999999999888642 488999999999999999999999 999999999999999999999999999987654
Q ss_pred CCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.... .....|+..|+|||.+.++ .++.++|||||||++|+|++|+.||...... ....... ...
T Consensus 154 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--------~~~~~~~------~~~ 218 (277)
T cd06917 154 NSSK-RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--------RAMMLIP------KSK 218 (277)
T ss_pred Cccc-cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--------hhhhccc------cCC
Confidence 3322 2334688999999988754 4689999999999999999999999643211 0110000 000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+.+.. ...+.++.+++.+||+.||++||++.++++
T Consensus 219 ~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 219 PPRLED---NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 011111 113467899999999999999999999975
No 258
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.7e-36 Score=303.11 Aligned_cols=240 Identities=22% Similarity=0.351 Sum_probs=187.6
Q ss_pred CccccCCCceEEEEEeCC--------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 300 NVLGQGGFGKVYRGVLAD--------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
+.||+|+||.||+|.... ..+||+|.+... .....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch-hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 469999999999998642 234888877432 23345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--------EEEcccc
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE--------AVVGDFG 443 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~kl~DfG 443 (619)
|+++|+|..+++... ..+++..+.+++.|++.||+|||++ +|+||||||+||+++.++. ++++|||
T Consensus 80 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 80 YVKFGSLDTYLKKNK---NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred cCCCCcHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 999999999987533 2478899999999999999999999 9999999999999987765 6999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCC-CCCCCCccccccchhHHHHHHHHhh
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQ-RAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
++..... .....++..|+|||.+.+. .++.++||||||+++|||++|. .|+...... ........
T Consensus 154 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--------~~~~~~~~ 220 (258)
T cd05078 154 ISITVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--------KKLQFYED 220 (258)
T ss_pred cccccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--------HHHHHHHc
Confidence 8865432 1234578899999999874 5799999999999999999995 444321110 00000000
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
. ...+.....++.+++.+||+.+|++|||++++++.|+
T Consensus 221 ~------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 R------------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred c------------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 0111122357899999999999999999999999874
No 259
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.6e-36 Score=305.17 Aligned_cols=249 Identities=20% Similarity=0.318 Sum_probs=201.3
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
.+|+..+.||.|+||.||+|.. .+|+.||+|.+.... ....+.+.+|+.+++.++|||++++++++...+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK-QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc-CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 4588899999999999999995 478999999886432 33457788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|..++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 98 LAGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred cCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 999999998864 2378999999999999999999999 99999999999999999999999999987654332
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.. .....|+..|+|||.+.+..++.++|||||||++|+|+||+.||....... ......... ...
T Consensus 170 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~--------~~~~~~~~~-~~~----- 234 (296)
T cd06655 170 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--------ALYLIATNG-TPE----- 234 (296)
T ss_pred cc-CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhcC-Ccc-----
Confidence 21 223458889999999998889999999999999999999999986432210 001110000 000
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+...+..+.+++.+||+.+|++||++.+++.
T Consensus 235 --~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 --LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred --cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0012223457889999999999999999999984
No 260
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=8.8e-36 Score=302.10 Aligned_cols=249 Identities=22% Similarity=0.296 Sum_probs=196.1
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQ 374 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 374 (619)
|++.+.||+|+||.||+|... ++..+|+|.+... .....+.+.+|+++++.++|||++++++++...+..++|+||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC-CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 566788999999999999975 5778899988532 23456678899999999999999999999999999999999999
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
+++|...+... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....... .
T Consensus 86 ~~~l~~~~~~~---~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~ 158 (282)
T cd06643 86 GGAVDAVMLEL---ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-Q 158 (282)
T ss_pred CCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc-c
Confidence 99998887642 23488999999999999999999999 99999999999999999999999999987653221 1
Q ss_pred eeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 455 VTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 455 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
......|+..|+|||.+. +..++.++|||||||++|||++|+.||...... ........... ...
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~-~~~- 228 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSEP-PTL- 228 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--------HHHHHHhhcCC-CCC-
Confidence 223346899999999984 345788999999999999999999998632210 11111111000 000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+...+..+.+++.+||+.+|++||++.++++
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 229 ------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ------CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011223467899999999999999999998874
No 261
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.6e-36 Score=304.42 Aligned_cols=262 Identities=20% Similarity=0.284 Sum_probs=195.1
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|+..+.||+|+||.||+|... +|+.||+|++.... .......+.+|++++++++||||+++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777889999999999999975 68999999986432 222345678899999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++ +|.+++... ...+++.....++.|+++||.|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CDQ-DLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 975 676666542 23489999999999999999999999 99999999999999999999999999998654322
Q ss_pred cceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc------cc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK------RL 525 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 525 (619)
. ......++..|+|||.+.+. .++.++|||||||++|||+||+.|+........ .+ .......... ..
T Consensus 154 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 154 R-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD---QL-KRIFRLLGTPTEESWPGV 228 (284)
T ss_pred C-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH---HH-HHHHHHhCCCChHHhHHh
Confidence 1 12234578899999988764 478999999999999999999998643221100 00 0000000000 00
Q ss_pred chhcccc----ccC-----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 DAIVDRN----LNK-----NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 ~~~~~~~----l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
....+.. ... ...+....++.+++.+||+.||.+|||++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000000 000 011223467889999999999999999999875
No 262
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8.4e-36 Score=307.54 Aligned_cols=197 Identities=22% Similarity=0.324 Sum_probs=159.3
Q ss_pred cCccccCCCceEEEEEeC---CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC--CCcceeEeccc
Q 007073 299 KNVLGQGGFGKVYRGVLA---DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT--PTERLLVYPFM 373 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~~ 373 (619)
...||+|+||+||+|... ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++|+||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 357999999999999965 45789999886432 23567889999999999999999998854 45678999998
Q ss_pred ccchhhhhhcccC-----CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEEEccccc
Q 007073 374 QNLSVAYRLREIK-----PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL----DEDFEAVVGDFGL 444 (619)
Q Consensus 374 ~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGl 444 (619)
++ +|.+.+.... .....+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 75 6666654221 1223478889999999999999999999 99999999999999 5667999999999
Q ss_pred ceeeccCCcc--eeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 445 AKLVDVRKTN--VTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 445 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
++........ ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||...
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9876433221 2234568999999999876 45799999999999999999999999643
No 263
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.2e-35 Score=298.34 Aligned_cols=250 Identities=23% Similarity=0.317 Sum_probs=195.7
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC----CcchHHHHHHHHHHHHHccCCCccceeeeeeCC--Ccc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE----SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TER 366 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 366 (619)
++|++.+.||+|+||.||+|... +|+.||+|.+.... .....+.+.+|+.++++++||||+++++++..+ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999964 58999999875321 122345788899999999999999999988664 346
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
+++|||+++++|.+++.... .+++....+++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG----ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 78999999999999887532 367888899999999999999999 99999999999999999999999999988
Q ss_pred eeccCCc--ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 447 LVDVRKT--NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 447 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
....... .......|+..|+|||.+.+..++.++|||||||++|||++|+.||...... .. .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~~-~~~~~---- 222 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-------AA-IFKIA---- 222 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-------HH-HHHHh----
Confidence 6532111 1122345888999999998888999999999999999999999998532110 00 01110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........+......+.+++.+|+. +|++||+++++++
T Consensus 223 -----~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 223 -----TQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -----cCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0001112234455678889999995 9999999999875
No 264
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.6e-36 Score=295.31 Aligned_cols=288 Identities=22% Similarity=0.212 Sum_probs=222.8
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCC-CcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~-g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
...+.|+..+.||.|.-|+||++..++ +..+|+|++.+.. +.......+.|.+||+.++||.+..|++.++++...+
T Consensus 74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~c 153 (459)
T KOG0610|consen 74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSC 153 (459)
T ss_pred cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeE
Confidence 344567778899999999999999864 5899999996432 2334556778999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
++||||+||+|....+... +..++...++-++..+.-||+|||-. |||.|||||+||||.++|++.|+||.++..
T Consensus 154 l~meyCpGGdL~~LrqkQp--~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~ 228 (459)
T KOG0610|consen 154 LVMEYCPGGDLHSLRQKQP--GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLR 228 (459)
T ss_pred EEEecCCCccHHHHHhhCC--CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecccccc
Confidence 9999999999999887643 45589999999999999999999999 999999999999999999999999998754
Q ss_pred eccC----------------------------------Cc---------------------ceeeecccccccccccccc
Q 007073 448 VDVR----------------------------------KT---------------------NVTTQVRGTMGHIAPEYLS 472 (619)
Q Consensus 448 ~~~~----------------------------------~~---------------------~~~~~~~gt~~y~aPE~~~ 472 (619)
.... .. ..+..++||-.|+|||++.
T Consensus 229 ~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~ 308 (459)
T KOG0610|consen 229 CPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR 308 (459)
T ss_pred CCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence 3110 00 0112356999999999999
Q ss_pred CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhc
Q 007073 473 TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLC 552 (619)
Q Consensus 473 ~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~C 552 (619)
+...+.++|+|+|||++|||+.|+.||......+ .+..++.+.+.-...+..+..+.+||.+.
T Consensus 309 G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-----------------Tl~NIv~~~l~Fp~~~~vs~~akDLIr~L 371 (459)
T KOG0610|consen 309 GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-----------------TLRNIVGQPLKFPEEPEVSSAAKDLIRKL 371 (459)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-----------------hHHHHhcCCCcCCCCCcchhHHHHHHHHH
Confidence 9999999999999999999999999997654321 22233333333222335567889999999
Q ss_pred cCCCCCCCCCHHHHHHHHhcCCcccchhhhhhhhhhhHHHHHhhccccCccc
Q 007073 553 TQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVEVTRRQEYERLQRRFDWGE 604 (619)
Q Consensus 553 l~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 604 (619)
+.+||.+|-....=...+++..+++.. .|...+-..-+..|.+.|-+.
T Consensus 372 LvKdP~kRlg~~rGA~eIK~HpFF~gV----nWaLir~~~PP~iP~~~d~~~ 419 (459)
T KOG0610|consen 372 LVKDPSKRLGSKRGAAEIKRHPFFEGV----NWALIRCARPPEIPKPVDGGL 419 (459)
T ss_pred hccChhhhhccccchHHhhcCccccCC----ChhheeccCCCcCCCccccCc
Confidence 999999999855555566666555432 233344444445555555544
No 265
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5e-36 Score=303.84 Aligned_cols=259 Identities=25% Similarity=0.321 Sum_probs=200.8
Q ss_pred CHHHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeC
Q 007073 285 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT 362 (619)
Q Consensus 285 ~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 362 (619)
++.++....+.|++.+.||+|+||.||+|... +++.+|+|.+... ......+..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC--hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 44555567788999999999999999999974 6889999987532 23446788899999988 69999999998853
Q ss_pred ------CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc
Q 007073 363 ------PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE 436 (619)
Q Consensus 363 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 436 (619)
....+++|||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+|+||||+||++++++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 3467899999999999998875432 3477888889999999999999999 9999999999999999999
Q ss_pred EEEcccccceeeccCCcceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchh
Q 007073 437 AVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVL 511 (619)
Q Consensus 437 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~ 511 (619)
++|+|||++........ ......|+..|+|||.+. ...++.++|||||||++|||+||+.||........
T Consensus 160 ~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~---- 234 (282)
T cd06636 160 VKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA---- 234 (282)
T ss_pred EEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh----
Confidence 99999999875532221 122346889999999875 34678899999999999999999999853221100
Q ss_pred HHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 512 LLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ... .............+..+.+++.+||+.||.+||++.|+++
T Consensus 235 ~----~~~---------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 235 L----FLI---------PRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred h----hhH---------hhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 000 0000001111234467899999999999999999999874
No 266
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6e-36 Score=300.69 Aligned_cols=253 Identities=21% Similarity=0.291 Sum_probs=198.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|...+.||+|+||.||+|... +++.||+|.++... ......+.+|+.+++.++||||+++++++...+..++|+|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP-GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 346777889999999999999964 68899999886432 3344567889999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++... ..++......++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 87 ~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 87 FCGGGSLQDIYHVT----GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred ccCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 99999999988653 2488999999999999999999999 9999999999999999999999999998765432
Q ss_pred Ccceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 452 KTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
. .......|+..|+|||.+. ...++.++|||||||++|||++|+.||....... .. ..... ...
T Consensus 160 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~----~~----~~~~~-~~~--- 226 (267)
T cd06645 160 I-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR----AL----FLMTK-SNF--- 226 (267)
T ss_pred c-cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh----hH----Hhhhc-cCC---
Confidence 2 2223446899999999874 4568899999999999999999999985322110 00 00000 000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+.... ....+..+.+++.+|++.+|++||++.++++
T Consensus 227 ~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 227 QPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0000000 0122356889999999999999999999875
No 267
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=7.8e-36 Score=297.86 Aligned_cols=250 Identities=20% Similarity=0.325 Sum_probs=202.1
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|+..+.||+|+||.||++... +|+.||+|++.... .....+++.+|+.++++++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999964 68999999986432 233456789999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+.+.... ...+++....+++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQR--GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 99999999887532 23478889999999999999999999 99999999999999999999999999998654322
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
. ......|++.|+|||.+.+..++.++|||||||++++|+||+.||...... +.+...... ..
T Consensus 156 ~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--------~~~~~~~~~-~~------- 218 (256)
T cd08218 156 E-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK--------NLVLKIIRG-SY------- 218 (256)
T ss_pred h-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH--------HHHHHHhcC-CC-------
Confidence 1 122345788999999999989999999999999999999999998642211 111111111 00
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+.....++.+++.+||+.+|++||++.+|++
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 219 --PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0112233467899999999999999999999986
No 268
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=7.2e-36 Score=302.37 Aligned_cols=252 Identities=24% Similarity=0.320 Sum_probs=200.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|++.+.||+|+||.||+|... ++..||+|..... .....+.|.+|++++++++|+||+++++++..+...++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE-SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 456888899999999999999975 6899999998532 33455678999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++.... ..+++.....++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 83 FCDGGALDSIMLELE---RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred ccCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 999999999887532 3488999999999999999999999 9999999999999999999999999998765332
Q ss_pred Ccceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
.. ......|++.|+|||.+. ...++.++||||||+++|||++|+.||...... ...........
T Consensus 157 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~-- 225 (280)
T cd06611 157 LQ-KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--------RVLLKILKSEP-- 225 (280)
T ss_pred cc-ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--------HHHHHHhcCCC--
Confidence 22 223345899999999875 345678999999999999999999998642210 11111111000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+.+ ..+...+.++.+++.+||+.+|++||++.++++
T Consensus 226 ----~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 226 ----PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred ----CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 000 012233457889999999999999999999975
No 269
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.5e-36 Score=304.46 Aligned_cols=264 Identities=23% Similarity=0.350 Sum_probs=196.4
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|+..+.||+|++|.||+|..+ +++.||+|.+...........+.+|++++++++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999975 68999999986543333345677899999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++ +|.+++.... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~-~L~~~~~~~~---~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 85 LDT-DLKQYMDDCG---GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 985 8888876532 2478899999999999999999999 99999999999999999999999999987543221
Q ss_pred cceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh--hcccchhc
Q 007073 453 TNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER--EKRLDAIV 529 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 529 (619)
. ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||........ .+......... ......+.
T Consensus 158 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 158 K-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED---QLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred c-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH---HHHHHHHhcCCCChhhhhhhh
Confidence 1 1122346889999998865 4589999999999999999999999864321100 00000000000 00000000
Q ss_pred --------------cccccCCC-CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 --------------DRNLNKNY-NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 --------------~~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+.... .......+.+++.+|++.+|++|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000000 0011257789999999999999999999875
No 270
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.2e-35 Score=299.50 Aligned_cols=255 Identities=26% Similarity=0.346 Sum_probs=201.0
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCc----
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTE---- 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~---- 365 (619)
++++|++.+.||+|+||.||+|... +++.+++|.+.... ...+.+.+|+.+++++ +|+||+++++++.....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 4678999999999999999999975 67899999886432 2456789999999998 69999999999976543
Q ss_pred --ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 366 --RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 366 --~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
.++||||+++++|.+++.........+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 7899999999999999876543345689999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
++....... .......|+..|+|||.+.. ..++.++||||||+++|+|+||+.||...... ... ..
T Consensus 159 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~----~~ 229 (275)
T cd06608 159 VSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM----RAL----FK 229 (275)
T ss_pred cceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH----HHH----HH
Confidence 987654322 22233458899999998753 34688999999999999999999998532110 001 11
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... .... ..........+.+++.+||..||++|||+.++++
T Consensus 230 ~~~~------~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 230 IPRN------PPPT--LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hhcc------CCCC--CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1000 0000 1112234568899999999999999999999985
No 271
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.6e-35 Score=299.39 Aligned_cols=248 Identities=24% Similarity=0.348 Sum_probs=201.3
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
-|...+.||+|+||.||+|... ++..||+|...........+.+.+|+.++++++||||+++++++..+...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4667789999999999999864 688999998864444445678889999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++++|..++.. ..+++.....++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 85 GGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence 99999988864 2378899999999999999999999 999999999999999999999999999876643322
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
. .....|+..|+|||.+.+..++.++|||||||++|+|+||..||..... . ........ ..
T Consensus 157 ~-~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~---~~~~~~~~-~~--------- 217 (277)
T cd06641 157 K-RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----M---KVLFLIPK-NN--------- 217 (277)
T ss_pred h-hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----H---HHHHHHhc-CC---------
Confidence 1 2234578899999999888899999999999999999999999853211 0 11111110 00
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
........+.++.+++.+||+.+|++||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 218 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 011222334678899999999999999999999973
No 272
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.7e-37 Score=315.19 Aligned_cols=245 Identities=24% Similarity=0.389 Sum_probs=196.2
Q ss_pred ccCccccCCCceEEEEEeC-CCcEEE---EEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc--ceeEec
Q 007073 298 EKNVLGQGGFGKVYRGVLA-DGTKVA---VKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE--RLLVYP 371 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~-~g~~vA---vK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~--~~lv~e 371 (619)
...+||+|+|-+||+|.+. +|..|| ||.-.-..++...+.|..|+++|+.++||||++++.++.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3468999999999999974 577776 3322222345556899999999999999999999999977655 678899
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEcccccceeecc
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDV 450 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla~~~~~ 450 (619)
.|..|+|..+..+... .+....++|+.||.+||.|||++ .|+|||||||-+||+|+.+ |.|||+|.|+|+....
T Consensus 124 L~TSGtLr~Y~kk~~~----vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRR----VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cccCCcHHHHHHHhcc----CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999988655 77788999999999999999998 6789999999999999865 8999999999997653
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.. ...+.|||.|||||.+. ..|++.+||||||+.++||+|+..||..- .....+...+.....+..+..+-|
T Consensus 199 s~---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC----~n~AQIYKKV~SGiKP~sl~kV~d 270 (632)
T KOG0584|consen 199 SH---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC----TNPAQIYKKVTSGIKPAALSKVKD 270 (632)
T ss_pred cc---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh----CCHHHHHHHHHcCCCHHHhhccCC
Confidence 32 23378999999999886 78999999999999999999999998632 222223333332233333333333
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+++.++|.+|+.. .++|||+.|++.
T Consensus 271 ------------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 271 ------------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ------------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 4788999999999 999999999983
No 273
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=5.8e-36 Score=304.12 Aligned_cols=264 Identities=22% Similarity=0.304 Sum_probs=202.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|+..+.||+|+||.||+|... +++.||+|.++... .....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999975 58899999886432 23345788999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|++++.+....... ..+++.....++.|++.|++|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEASP----GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 99987776655432 2378899999999999999999999 9999999999999999999999999999876544
Q ss_pred CcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH---hh------
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL---ER------ 521 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~------ 521 (619)
.........++..|+|||++.+. .++.++||||||+++|+|++|+.||....... .+....... ..
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID----QLYLIQKCLGPLPPSHQELF 229 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCHHHhhhc
Confidence 33233445678899999999888 78999999999999999999999986432110 010000000 00
Q ss_pred --hccc-----chhcccc-ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 --EKRL-----DAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 --~~~~-----~~~~~~~-l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... ....+.. ....+....+.++.+++.+||+.+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000 0000000 000011122578999999999999999999999875
No 274
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.8e-35 Score=298.12 Aligned_cols=254 Identities=24% Similarity=0.389 Sum_probs=197.5
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC---------cchHHHHHHHHHHHHHccCCCccceeeeeeCCC
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES---------PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 364 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 364 (619)
+|...+.||+|+||.||+|... +|+.||+|.++.... ....+.+.+|+.+++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4667889999999999999864 689999998753211 011346788999999999999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++|+||+++++|.++++.. ..+++..+..++.|++.||.|||++ +++||||+|+||+++.++.++++|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 999999999999999998764 3488889999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcc-eeeeccccccccccccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 445 AKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGK--SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 445 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
++........ ......|+..|+|||.+.... ++.++||||||+++||+++|..||...... ........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~ 226 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI--------AAMFKLGN 226 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH--------HHHHHhhc
Confidence 9765322111 122345888999999987654 789999999999999999999998532110 00011000
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..... ..........+..+.+++.+||+.+|++||++.+|++
T Consensus 227 -~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 227 -KRSAP----PIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred -cccCC----cCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 00000 0111112233568899999999999999999999886
No 275
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=301.98 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=210.7
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.-|...+.||+|.|+.|-.|++- +|.+||||++-+... ......+.+|++-|+.++|||||++|++..+....|+|.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 44777789999999999999854 799999999965442 2345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCcEEEcccccceeecc
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-EDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla~~~~~ 450 (619)
.-.+|+|.+++.....+ +......+++.||..|+.|+|+. .+|||||||+||.+- .-|-|||+|||++..+.+
T Consensus 98 LGD~GDl~DyImKHe~G---l~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEG---LNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred ecCCchHHHHHHhhhcc---ccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 99999999999876554 88899999999999999999999 999999999998775 568899999999987654
Q ss_pred CCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
. ...+..+|+..|-|||++.+..| .+++||||+|||+|-|++|+.||...... +.+..++
T Consensus 172 G--~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS-----------------ETLTmIm 232 (864)
T KOG4717|consen 172 G--KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS-----------------ETLTMIM 232 (864)
T ss_pred c--chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch-----------------hhhhhhh
Confidence 4 33455689999999999999888 57899999999999999999999754322 2334455
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
|.... .+...+.++.+|+..|+..||++|-+.++|+..
T Consensus 233 DCKYt--vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 233 DCKYT--VPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred ccccc--CchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 55433 356677889999999999999999999998753
No 276
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.4e-35 Score=305.69 Aligned_cols=259 Identities=24% Similarity=0.251 Sum_probs=202.9
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc--chHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP--GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|...+.||+|+||+||+|... +++.||+|.+...... ...+.+..|+++++.++|+||+++++.+......++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999975 5899999998754322 24567889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+.+++|.+++.... ...+++.....++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhCC--CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 9999999999887432 24588899999999999999999999 999999999999999999999999999875432
Q ss_pred CCcc----------------------------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 451 RKTN----------------------------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 451 ~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
.... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 2110 111235788999999999888999999999999999999999998643
Q ss_pred ccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 503 RLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
.... .. . .+.+...........+..+.+++.+|++.+|++||++...++.+....
T Consensus 236 ~~~~-------~~-~---------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~ 290 (316)
T cd05574 236 NRDE-------TF-S---------NILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP 290 (316)
T ss_pred chHH-------HH-H---------HHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence 2110 00 0 011111111111114568999999999999999999555554444443
No 277
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.7e-35 Score=296.60 Aligned_cols=252 Identities=26% Similarity=0.406 Sum_probs=200.6
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|...+.||+|+||.||+|... +++.||+|.++.... ....+.+..|+.+++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999964 689999999875432 23567889999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEHG----RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhhc----CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 9999999998753 2378888999999999999999999 99999999999999999999999999998765433
Q ss_pred cceee---eccccccccccccccCCC---CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 453 TNVTT---QVRGTMGHIAPEYLSTGK---SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 453 ~~~~~---~~~gt~~y~aPE~~~~~~---~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
..... ...++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... . ........ ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~----~---~~~~~~~~-~~-- 223 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE----F---QIMFHVGA-GH-- 223 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch----H---HHHHHHhc-CC--
Confidence 32221 345788999999998766 899999999999999999999999642210 0 00000000 00
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+.+. ........+.+++.+||+.+|++||++.+++.
T Consensus 224 ---~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 224 ---KPPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---CCCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 01122457789999999999999999999874
No 278
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.2e-35 Score=296.65 Aligned_cols=253 Identities=26% Similarity=0.406 Sum_probs=201.1
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCC-----cchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES-----PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
+|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|++++++++|+||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477789999999999999995 5789999998864321 1134678899999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEccccccee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-EAVVGDFGLAKL 447 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~ 447 (619)
|+||+++++|.+++.... .+++.....++.|++.||+|||++ +++|+||+|+||+++.++ .+||+|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG----AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 999999999999987532 478899999999999999999999 999999999999998775 599999999876
Q ss_pred eccCCcc---eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 448 VDVRKTN---VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 448 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
....... ......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||........ .......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~----- 223 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-----LALIFKI----- 223 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-----HHHHHHH-----
Confidence 6433111 12234578899999999888899999999999999999999999864321110 0111000
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.........+.....++.+++.+|++.+|++||++.++++
T Consensus 224 ----~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 224 ----ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ----hccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0011112233445578899999999999999999999874
No 279
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.9e-35 Score=308.43 Aligned_cols=261 Identities=24% Similarity=0.268 Sum_probs=193.5
Q ss_pred HHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC-----
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP----- 363 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 363 (619)
...++|...+.||+|+||.||+|.. .+++.||||++.... .......+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3457899999999999999999996 468899999986432 222345677899999999999999999887543
Q ss_pred -CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 364 -TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 364 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
...+++++++ +++|.+.+.. ..++...+..++.|++.||.|||++ +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC-----QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3468888887 6788777653 2388899999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
|+++..... .....||..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .+.........
T Consensus 163 g~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~~ 234 (343)
T cd07878 163 GLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID----QLKRIMEVVGT 234 (343)
T ss_pred ccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHHhCC
Confidence 999865432 233468999999999876 568999999999999999999999996432110 00000000000
Q ss_pred --hcccchhcc-------ccccCCC-------CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 --EKRLDAIVD-------RNLNKNY-------NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 --~~~~~~~~~-------~~l~~~~-------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
......+.. ..+.... .......+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 0000000 0011245789999999999999999999985
No 280
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.1e-35 Score=295.83 Aligned_cols=252 Identities=22% Similarity=0.337 Sum_probs=206.2
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|++.+.||+|++|.||+|... +|+.||||++...........+.+|+.++.+++|+|++++++++..+...++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999976 59999999987544334567899999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
+++++|.+++... ..++......++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 81 MDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 9999999999764 348899999999999999999999 8 9999999999999999999999999999876443
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
... .....++..|+|||.+.+..++.++||||||+++|+|+||+.||...... . ..+....... .
T Consensus 154 ~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~---~~~~~~~~~~---------~ 218 (264)
T cd06623 154 LDQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--S---FFELMQAICD---------G 218 (264)
T ss_pred CCc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--C---HHHHHHHHhc---------C
Confidence 322 22345788999999999889999999999999999999999998643210 1 1111111111 0
Q ss_pred cccCCCCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQ-EVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ...... .+..+.+++.+|++.+|++||++.++++
T Consensus 219 ~~-~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 219 PP-PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred CC-CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 00 111222 4568999999999999999999999986
No 281
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.8e-35 Score=300.10 Aligned_cols=262 Identities=21% Similarity=0.301 Sum_probs=197.0
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|+..+.||+|++|.||+|... +|+.||||++.... .......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999975 68999999886433 233346788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+. ++|..++.... ...+++.....++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDASP--LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 57888776533 23488999999999999999999999 99999999999999999999999999987654322
Q ss_pred cceeeeccccccccccccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc--------
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK-------- 523 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 523 (619)
. ......++..|+|||.+.+.. ++.++||||||+++|||+||+.||....... ...........+.
T Consensus 155 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 155 R-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID----QLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred c-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHHhCCCChhhhhhhh
Confidence 2 122334688999999887644 6889999999999999999999986432211 1111111110000
Q ss_pred -------ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 524 -------RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 524 -------~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.........+. ...+.....+.+++.+|++.||++|||++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 230 SLPDYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000000000 001122356789999999999999999999875
No 282
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.3e-35 Score=299.40 Aligned_cols=263 Identities=22% Similarity=0.274 Sum_probs=201.0
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|++.+.||+|+||.||+|... +|+.||+|++..... ......+.+|+.++++++||||+++++++..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999974 689999999875432 33457889999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+ +++|.+++.... ..+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 999999887533 4489999999999999999999999 99999999999999999999999999998765443
Q ss_pred cceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc--------
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK-------- 523 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 523 (619)
........|+..|+|||.+.+. .++.++||||+|+++|||+||..+|...... ..+.........+.
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI----EQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH----HHHHHHHHHcCCCChHHHhhcc
Confidence 2223345689999999988654 4689999999999999999998777532211 00101111000000
Q ss_pred cc---chhcccccc----CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 524 RL---DAIVDRNLN----KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 524 ~~---~~~~~~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+ ..+...... ....+.....+.+++.+|++.+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 000000000 0001123478899999999999999999999985
No 283
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=291.96 Aligned_cols=249 Identities=21% Similarity=0.282 Sum_probs=206.7
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
-|.+.++||+|+||.||+|.++ .|+.+|+|.+.- ....++..+|+.++++.+.|++|+++|.+......++|||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV---~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV---DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc---cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 4667789999999999999975 699999998853 335678899999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
.-|+..+.++- ...++...+...++.+...||+|||.. .=+|||||+.|||++.+|.+||+|||.|-.+.. ..
T Consensus 111 GAGSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD-TM 183 (502)
T KOG0574|consen 111 GAGSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD-TM 183 (502)
T ss_pred CCCcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhh-hH
Confidence 99999999876 345689999999999999999999998 789999999999999999999999999976542 22
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
.....+.||+.|||||+++.-.|..++||||+|+...||..|++||.....-.. ...-...+..
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA----------------IFMIPT~PPP 247 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA----------------IFMIPTKPPP 247 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce----------------eEeccCCCCC
Confidence 334467899999999999999999999999999999999999999864221100 0000011111
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.-..+...+.++.+++++|+-++|++|-|+.++++.
T Consensus 248 TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 248 TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 111256677889999999999999999999988753
No 284
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=308.14 Aligned_cols=245 Identities=27% Similarity=0.357 Sum_probs=198.7
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccC--CCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
-|...+.||.|+||.||-|.. .+...||||++.-. .+...+.++.+|+..+.+++|||++.+-|+|-.....++|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 366678899999999999995 47889999998532 234456788999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
||-| +-.+.+.-.+ .++....+..|+.+...||+|||+. +.||||||+.|||+++.|.|||+|||.|....+.
T Consensus 107 YClG-SAsDlleVhk---KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA 179 (948)
T ss_pred HHhc-cHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence 9965 6667665432 3488889999999999999999999 9999999999999999999999999999876543
Q ss_pred Ccceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 452 KTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
..++|||.|||||++. .+.|+-|+||||+|++..|+.-.++|.-.... +.....+..-
T Consensus 180 -----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA--------------MSALYHIAQN 240 (948)
T KOG0577|consen 180 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------------MSALYHIAQN 240 (948)
T ss_pred -----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH--------------HHHHHHHHhc
Confidence 3468999999999885 57899999999999999999999998643211 0000111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
-.+.+ ...+++..+..++..|+++-|.+|||.++++.
T Consensus 241 esPtL---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 241 ESPTL---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CCCCC---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 11111 14567778899999999999999999999885
No 285
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.6e-35 Score=293.86 Aligned_cols=249 Identities=23% Similarity=0.343 Sum_probs=200.4
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|+..+.||+|+||.||++... +++.+|+|++.... .......+.+|++++++++|||++++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778899999999999999964 68899999986432 334567889999999999999999999999888899999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEcccccceeeccC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla~~~~~~ 451 (619)
+++++|.+++.... ...+++..+.+++.++++|++|||++ +++|+||+|+||+++++ ..+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 99999999997632 33478899999999999999999999 99999999999999855 56899999999876433
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.. .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ......... ...
T Consensus 156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--------~~~~~~~~~-~~~----- 219 (256)
T cd08220 156 SK--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--------ALVLKIMSG-TFA----- 219 (256)
T ss_pred cc--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--------HHHHHHHhc-CCC-----
Confidence 21 22345888999999999888999999999999999999999998643211 111111100 000
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
......+..+.+++.+||+.+|++|||+.++++
T Consensus 220 ----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 220 ----PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ----CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111123457889999999999999999999985
No 286
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.4e-35 Score=301.60 Aligned_cols=257 Identities=22% Similarity=0.332 Sum_probs=194.1
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|...+.||+|+||.||++... +|+.||+|.+...........+.+|+.++.++. |+||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555678999999999999965 689999999875444445677889999999996 99999999999988899999999
Q ss_pred cccchhhhhhccc-CCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 373 MQNLSVAYRLREI-KPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 373 ~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
+.. ++.++.... ......+++....+++.+++.||+|||+.. +++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 443332211 112245888999999999999999999732 8999999999999999999999999999755332
Q ss_pred CcceeeeccccccccccccccCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTG---KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
.. .....|+..|+|||.+.+. .++.++|||||||++|||++|+.||.... ............
T Consensus 162 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~------ 226 (288)
T cd06616 162 IA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-------SVFDQLTQVVKG------ 226 (288)
T ss_pred Cc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-------hHHHHHhhhcCC------
Confidence 21 2233578999999999776 68999999999999999999999986422 011111111100
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..+.+........+..+.+++.+||+.+|++|||+.+|++.
T Consensus 227 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 227 DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111111122345678999999999999999999998853
No 287
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2e-35 Score=300.92 Aligned_cols=266 Identities=21% Similarity=0.264 Sum_probs=196.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++++|.+.+.||+|+||.||+|... +|+.||+|++...........+.+|+.+++.++|+||+++++++..+...++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3567899999999999999999864 689999999865443444456789999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+. +++...+.... ..+.+.....++.|++.||.|||+. +|+|+||||+||+++.++.+||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQHP---GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 56666654322 2367778888999999999999999 999999999999999999999999999875432
Q ss_pred CCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH----------
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL---------- 519 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---------- 519 (619)
... ......++..|+|||.+.+. .++.++|||||||++|||+||+.||+...... ..+.+.....
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 156 PSQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF---EQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred CCC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH---HHHHHHHHHcCCCChhhhhh
Confidence 221 12233578899999998754 57899999999999999999999996432210 0111100000
Q ss_pred -hh-hcccchhccccccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 520 -ER-EKRLDAIVDRNLNKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 520 -~~-~~~~~~~~~~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. +............... .......+.+++.+|++.||++|||+.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00 0000000000000000 0012357789999999999999999999874
No 288
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-36 Score=305.54 Aligned_cols=254 Identities=22% Similarity=0.352 Sum_probs=202.2
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEecc-CCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCccee
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTD-FESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~-~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 368 (619)
+....|++.+.||+||.+.||++...+.+.||+|++.. ..+......|.+|++.|.+++ |.+||++++|-..++..|+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 34556888999999999999999998889999998763 334556788999999999996 9999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||-+ .+|...|...... ...| .++.+..|+..|+.++|++ ||||.||||.|+|+-. |.+||+|||+|..+
T Consensus 438 vmE~Gd-~DL~kiL~k~~~~--~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 438 VMECGD-IDLNKILKKKKSI--DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAI 509 (677)
T ss_pred Eeeccc-ccHHHHHHhccCC--CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhccc
Confidence 999865 4888888865432 2334 7788999999999999999 9999999999999854 58999999999988
Q ss_pred ccCCcce-eeeccccccccccccccCC-----------CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007073 449 DVRKTNV-TTQVRGTMGHIAPEYLSTG-----------KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 449 ~~~~~~~-~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 516 (619)
..+.+.. ....+||+.||+||.+... +.++++||||+||++|+|+.|+.||... ....
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~----------~n~~ 579 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI----------INQI 579 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH----------HHHH
Confidence 7665543 3456799999999998532 2578999999999999999999998521 1111
Q ss_pred HHHhhhcccchhccccccCCCCHHH-HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQE-VETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~-~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.++..+.++.....++.-. ..+++++|+.|++.||++||+..++++
T Consensus 580 ------aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 580 ------AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ------HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 2344555554332332111 123899999999999999999999985
No 289
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.5e-36 Score=312.17 Aligned_cols=245 Identities=21% Similarity=0.222 Sum_probs=186.3
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc---cCCCccceeeeeeCCCcceeEeccccc
Q 007073 302 LGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA---VHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 302 lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
||+|+||+||+|... +|+.||||++.... .......+..|..++... +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999965 68999999985321 122234455677776655 699999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|.+++... ..++......++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~l~~~----~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~ 152 (330)
T cd05586 81 GELFWHLQKE----GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KT 152 (330)
T ss_pred ChHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CC
Confidence 9999888653 3488899999999999999999999 99999999999999999999999999987543222 12
Q ss_pred eeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccccc
Q 007073 456 TTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLN 534 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 534 (619)
.....||..|+|||.+.+. .++.++|||||||++|||+||+.||...... +........ .. .+.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~--------~~~~~i~~~-~~------~~~ 217 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ--------QMYRNIAFG-KV------RFP 217 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH--------HHHHHHHcC-CC------CCC
Confidence 2345699999999998764 4799999999999999999999998643211 111111110 00 000
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 535 KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 535 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.......+.+++.+|++.||++||++.+.++.+..
T Consensus 218 ---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 ---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 01123567899999999999999965433333333
No 290
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.7e-35 Score=321.15 Aligned_cols=265 Identities=17% Similarity=0.219 Sum_probs=191.0
Q ss_pred HHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCC------Cccceeeee
Q 007073 288 ELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR------NLLRLIGFC 360 (619)
Q Consensus 288 el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~------niv~l~~~~ 360 (619)
++...+++|.+.++||+|+||+||+|... .++.||||+++.. ......+..|+.+++.++|. +++++++++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV--PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc--hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 44456788999999999999999999964 5788999998642 22344566788887777654 588888888
Q ss_pred eCC-CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCC---
Q 007073 361 TTP-TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDF--- 435 (619)
Q Consensus 361 ~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~--- 435 (619)
... ...++||+++ +++|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKH----GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccc
Confidence 765 4678888887 66787777653 248889999999999999999997 5 899999999999998765
Q ss_pred -------------cEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 436 -------------EAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 436 -------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||+||+.||+..
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 49999999886432 2233457999999999999999999999999999999999999999753
Q ss_pred ccccccchhHH---------HHHHHH--------h-hhcccchhcccc-----ccC--CCCHHHHHHHHHHHHhccCCCC
Q 007073 503 RLEEEDDVLLL---------DHVKKL--------E-REKRLDAIVDRN-----LNK--NYNIQEVETMIQVALLCTQASP 557 (619)
Q Consensus 503 ~~~~~~~~~~~---------~~~~~~--------~-~~~~~~~~~~~~-----l~~--~~~~~~~~~l~~l~~~Cl~~dP 557 (619)
..... .... .|.... . ....+....++. ... .........+.+|+.+|++.||
T Consensus 349 ~~~~~--~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 349 DNLEH--LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred ChHHH--HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 32100 0000 000000 0 000000000000 000 0001123467899999999999
Q ss_pred CCCCCHHHHHH
Q 007073 558 EDRPAMSEVVR 568 (619)
Q Consensus 558 ~~RPs~~evl~ 568 (619)
++|||++|+++
T Consensus 427 ~~R~ta~e~L~ 437 (467)
T PTZ00284 427 QKRLNARQMTT 437 (467)
T ss_pred hhCCCHHHHhc
Confidence 99999999985
No 291
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.2e-35 Score=301.51 Aligned_cols=257 Identities=19% Similarity=0.224 Sum_probs=201.8
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|+..+.||+|+||.||++... +++.||+|.+..... ......+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888899999999999999975 578999998865321 233467889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++... ..+++.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKNI----GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 999999999999653 2478888999999999999999999 999999999999999999999999999864211
Q ss_pred CC--------------cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007073 451 RK--------------TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 451 ~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 516 (619)
.. ........|+..|+|||.+.+..++.++|+||||+++|||+||+.||...... +..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~--------~~~ 225 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE--------ELF 225 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHH
Confidence 00 00111235788999999998888999999999999999999999998632210 111
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....... . ..+. .....+..+.+++.+||+.+|++||++.++.+.|+..
T Consensus 226 ~~~~~~~-~---~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 226 GQVISDD-I---EWPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred HHHHhcc-c---CCCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 1111100 0 0000 0112345789999999999999999988888887773
No 292
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.3e-35 Score=298.79 Aligned_cols=263 Identities=23% Similarity=0.270 Sum_probs=198.5
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc----chHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP----GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
+|...+.||+|+||.||+|... +|+.||||.+...... .....+..|++++++++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999965 6899999998754322 2345677899999999999999999999998899999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+ +|+|..++.... ..+++..+..++.|+++||+|||++ +|+|+||||+||+++.++.++|+|||+++...
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 899999987533 2589999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh------
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE------ 522 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------ 522 (619)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|..+|....... .+..........
T Consensus 154 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 154 SPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID----QLGKIFEALGTPTEENWP 228 (298)
T ss_pred CCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH----HHHHHHHHcCCCchhhhh
Confidence 4322 1223346788999998865 457899999999999999999977775322110 011111100000
Q ss_pred --cccchhccccccCC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 523 --KRLDAIVDRNLNKN-----YNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 523 --~~~~~~~~~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.............. ........+.+++.+||+.+|++|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000000000 012234678999999999999999999999973
No 293
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.4e-35 Score=300.41 Aligned_cols=246 Identities=21% Similarity=0.292 Sum_probs=196.1
Q ss_pred ccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccc
Q 007073 298 EKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
....||+|+||.||++... ++..||||.+.... ....+.+.+|+.+++.++|+||+++++.+...+..++||||++++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~ 104 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG 104 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence 3467999999999999964 68899999885422 334567889999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCccee
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 456 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 456 (619)
+|.+++.. ..+++.....++.|++.||+|||++ +|+||||||+||++++++.++|+|||++........ ..
T Consensus 105 ~L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~ 175 (292)
T cd06658 105 ALTDIVTH-----TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KR 175 (292)
T ss_pred cHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cC
Confidence 99988753 2378889999999999999999999 999999999999999999999999999876533222 22
Q ss_pred eeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCC
Q 007073 457 TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKN 536 (619)
Q Consensus 457 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 536 (619)
....|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ........ ...+.+..
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~------~~~~~~~~- 240 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--------QAMRRIRD------NLPPRVKD- 240 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHh------cCCCcccc-
Confidence 3345889999999998888999999999999999999999998642211 01111110 01111110
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 537 YNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 537 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.......+.+++.+||..||++|||++++++.
T Consensus 241 -~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 -SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11234578899999999999999999999863
No 294
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.2e-35 Score=299.74 Aligned_cols=266 Identities=21% Similarity=0.268 Sum_probs=197.8
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC--CcceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 369 (619)
++|+..+.||+|+||.||+|... +++.+|+|.++... .......+.+|+.++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999976 68899999986432 222334677899999999999999999998777 789999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+||+++ +|.+.+.... ..+++.....++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus 85 ~e~~~~-~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETMK---QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999985 8888876532 2589999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH---------HH--H
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD---------HV--K 517 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~---------~~--~ 517 (619)
.... ......++..|+|||.+.+. .++.++|+||||+++|||++|+.||........... +.. |. .
T Consensus 158 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 158 SPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNK-IFKLLGTPTEKIWPGFS 235 (293)
T ss_pred CCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCchHHHHHhh
Confidence 4322 12234578899999998764 468999999999999999999999864322110000 000 00 0
Q ss_pred HHhhh--cccchhccccccCCCCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 518 KLERE--KRLDAIVDRNLNKNYNIQ-EVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 518 ~~~~~--~~~~~~~~~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+... ..........+...+... ....+.+++.+||+.+|++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000 000000011111111111 3567889999999999999999999985
No 295
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.1e-35 Score=293.23 Aligned_cols=250 Identities=22% Similarity=0.294 Sum_probs=205.1
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|++.+.||+|+||.||++... +++.+|+|.+.... .......+.+|++++++++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999864 68899999986433 233456778999999999999999999999988999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|..++.........+++.....++.|+++||+|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999877544445689999999999999999999999 9999999999999999999999999999876543
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
......++..|+|||.+.+..++.++|+||||+++|||++|+.||...... ....... ...
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~-~~~-------- 217 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--------DLRYKVQ-RGK-------- 217 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHh-cCC--------
Confidence 222345788999999999989999999999999999999999998643211 0111110 011
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..........++.+++.+|++.+|++||++.++++
T Consensus 218 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 218 -YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11122345578999999999999999999999985
No 296
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.8e-35 Score=299.43 Aligned_cols=248 Identities=27% Similarity=0.355 Sum_probs=195.5
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.+.|...+.||+|+||+||+|... +|+.||+|.+.... .....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 345888899999999999999975 68999999886332 223346788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+||+.+ ++.+.+.... ..+++..+..++.|++.||.|||+. +|+||||+|+||++++++.++|+|||++....
T Consensus 94 ~e~~~g-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 94 MEYCLG-SASDILEVHK---KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred HHhhCC-CHHHHHHHcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 999974 6666554322 2488999999999999999999999 99999999999999999999999999987653
Q ss_pred cCCcceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
.. ....|+..|+|||.+. .+.++.++||||||+++|||+||+.||...... .........
T Consensus 167 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~--------~~~~~~~~~---- 229 (307)
T cd06607 167 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQN---- 229 (307)
T ss_pred CC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH--------HHHHHHhcC----
Confidence 32 2345788999999874 456889999999999999999999998532211 000011000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..........+..+.+++.+||+.+|++||++.+++..
T Consensus 230 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 230 -----DSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred -----CCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00011122345678999999999999999999999864
No 297
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.8e-35 Score=296.83 Aligned_cols=264 Identities=23% Similarity=0.350 Sum_probs=199.7
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
+|+..+.||+|++|.||+|... +|+.||||.+...........+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999975 689999999875444445567788999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++ +|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++........
T Consensus 81 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 81 DK-DLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred Cc-cHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 85 78777765332 34589999999999999999999999 999999999999999999999999999976533211
Q ss_pred ceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh--hcccchhc-
Q 007073 454 NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER--EKRLDAIV- 529 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 529 (619)
......++..|+|||.+.+. .++.++||||||+++|||+||+.||........ .......... ......+.
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ----LLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH----HHHHHHHhCCCChhhHHHHhc
Confidence 12234578899999988654 578999999999999999999999865432111 0010000000 00000000
Q ss_pred ----ccccc-------CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 ----DRNLN-------KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ----~~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..... ....+..+..+.+++.+|++.||++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 0011223467889999999999999999999875
No 298
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-36 Score=309.22 Aligned_cols=246 Identities=23% Similarity=0.341 Sum_probs=198.2
Q ss_pred ccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchhh
Q 007073 301 VLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVA 379 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 379 (619)
+||+|.||+||.|++. +..++|||-+....+ ...+.+..|+.+-++++|.|||+++|.+.+++...+.||-++||+|.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds-r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS-REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccc-hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 6999999999999975 466799998875443 34566788999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCcEEEcccccceeeccCCcceeee
Q 007073 380 YRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-EDFEAVVGDFGLAKLVDVRKTNVTTQ 458 (619)
Q Consensus 380 ~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~~ 458 (619)
..++..-. .-.-...+.-.+..||.+||.|||+. .|||||||-+|||++ -.|.+||+|||.++.+..- ...+..
T Consensus 661 sLLrskWG-PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-nP~TET 735 (1226)
T KOG4279|consen 661 SLLRSKWG-PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-NPCTET 735 (1226)
T ss_pred HHHHhccC-CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC-Cccccc
Confidence 99986432 11236677788899999999999999 999999999999996 5789999999999877432 223445
Q ss_pred ccccccccccccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCC
Q 007073 459 VRGTMGHIAPEYLSTGK--SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKN 536 (619)
Q Consensus 459 ~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 536 (619)
+.||.-|||||++..++ |+.++|||||||++.||.||++||.....+.. . +..-+- =..-++
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA------A----MFkVGm------yKvHP~ 799 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA------A----MFKVGM------YKVHPP 799 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH------h----hhhhcc------eecCCC
Confidence 67999999999997654 89999999999999999999999964322110 0 000000 011234
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 537 YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 537 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+...+++...++.+|+..||.+||+++++++
T Consensus 800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 56777889999999999999999999999984
No 299
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.6e-35 Score=293.00 Aligned_cols=250 Identities=20% Similarity=0.331 Sum_probs=200.3
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|+..+.||+|+||.||+|... +|..||+|.+.... .....+.+.+|+.+++.++|+||+++++.+......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999975 58899999986432 223456788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEcccccceeeccC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-EAVVGDFGLAKLVDVR 451 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~~~ 451 (619)
+++++|.+++.... ...+++..+..++.|+++||+|||+. +++|+||||+||++++++ .+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQR--GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 99999999987532 23478999999999999999999999 999999999999999885 5699999999866432
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.. ......|++.|+|||...+..++.++||||||+++|||++|+.||..... .+....... ... .
T Consensus 156 ~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~-~~~----~- 220 (257)
T cd08225 156 ME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL--------HQLVLKICQ-GYF----A- 220 (257)
T ss_pred cc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHhc-ccC----C-
Confidence 22 22234588999999999888899999999999999999999999863221 111111111 011 0
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+.....+.+++.+||+.+|++|||+.++++
T Consensus 221 ----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 221 ----PISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 111223457899999999999999999999975
No 300
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.4e-35 Score=297.05 Aligned_cols=250 Identities=21% Similarity=0.313 Sum_probs=201.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|...+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ-QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc-cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 57888899999999999999864 6889999988532 233456788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++... .+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 98 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred CCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 9999999988642 367888999999999999999999 99999999999999999999999999987654332
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
. ......|++.|+|||.+.+..++.++||||||+++|++++|+.||........ . ..... .+.
T Consensus 170 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~----~----~~~~~--------~~~ 232 (293)
T cd06647 170 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----L----YLIAT--------NGT 232 (293)
T ss_pred c-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh----e----eehhc--------CCC
Confidence 2 22234588899999999888899999999999999999999999964321100 0 00000 000
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
............+.+++.+||+.+|++||++.+++..
T Consensus 233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 233 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001122334578899999999999999999999853
No 301
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.3e-35 Score=296.48 Aligned_cols=252 Identities=22% Similarity=0.338 Sum_probs=203.6
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
.++.|+..+.||+|+||.||+|.+. ++..||+|.+..... ..+.+..|+++++.++|+|++++++++......++|+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566888899999999999999976 689999999864332 4677889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 95 EYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred eccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 9999999999998743 3589999999999999999999998 999999999999999999999999999875543
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
... ......++..|+|||.+.+..++.++||||||+++|+|+||+.||...... ........ ......
T Consensus 169 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~~~~-- 236 (286)
T cd06614 169 EKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--------RALFLITT-KGIPPL-- 236 (286)
T ss_pred chh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHh-cCCCCC--
Confidence 221 122335788999999998888999999999999999999999998632211 00011100 000000
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
......+..+.+++.+|++.+|.+||++.++++
T Consensus 237 -----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 237 -----KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred -----cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 011123467899999999999999999999985
No 302
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.3e-35 Score=295.91 Aligned_cols=262 Identities=22% Similarity=0.296 Sum_probs=197.0
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
|+..+.||+|++|.||+|... +|+.||+|++.... .......+.+|+++++.++|||++++++++...+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566789999999999999964 79999999986432 2233467889999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
+ ++|.+++..... ..+++..+.+++.|+++||+|||++ +++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 5 688888865432 3489999999999999999999999 999999999999999999999999999976543221
Q ss_pred ceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc--------c
Q 007073 454 NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK--------R 524 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 524 (619)
. .....++..|+|||.+.+. .++.++||||||+++|||+||+.||....... ............. .
T Consensus 155 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 T-YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID----QLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred c-cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChHHhhhhhh
Confidence 1 2223468899999988654 57899999999999999999999986432211 1111111100000 0
Q ss_pred cchh---cccc---ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAI---VDRN---LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~---~~~~---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+.+. .... ......+.....+.+++.+|++.+|++|||++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 0000 000011223357889999999999999999999985
No 303
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=9.7e-35 Score=295.76 Aligned_cols=244 Identities=24% Similarity=0.272 Sum_probs=198.4
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|.+.+.||+|+||.||++... +++.||+|.++... .....+.+.+|++++++++||||+++++++......++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888899999999999999975 68999999986432 2234567889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++... ..++...+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRKS----GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 999999999998764 3488899999999999999999999 999999999999999999999999999987643
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
. .....|++.|+|||.+.+...+.++||||||+++|+|+||+.||...... ....... .+..
T Consensus 154 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~-~~~~----- 215 (290)
T cd05580 154 R----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI--------QIYEKIL-EGKV----- 215 (290)
T ss_pred C----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHh-cCCc-----
Confidence 3 23345889999999998888999999999999999999999998643210 1111111 0000
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVV 567 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl 567 (619)
..+......+.+++.+||+.+|++|| +++|++
T Consensus 216 -----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 216 -----RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred -----cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 11122246788999999999999999 555554
No 304
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.2e-34 Score=295.57 Aligned_cols=266 Identities=20% Similarity=0.250 Sum_probs=196.1
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCc-----
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTE----- 365 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~----- 365 (619)
++|+..+.||+|+||.||+|... +|+.||+|....... ......+.+|+.+++++. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999965 689999998764322 223467888999999995 6999999999877665
Q ss_pred ceeEecccccchhhhhhcccCCC-CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-CCcEEEcccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPG-EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-DFEAVVGDFG 443 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG 443 (619)
.++||||+++ ++..++...... ...+++.....++.|++.||.|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999986 787777654322 34589999999999999999999999 9999999999999998 8999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
++........ ......+++.|+|||.+.+ ..++.++||||||+++|||+||+.||....... ...........+
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~----~~~~~~~~~~~~ 231 (295)
T cd07837 157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ----QLLHIFKLLGTP 231 (295)
T ss_pred cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHHHhCCC
Confidence 9986533221 1222346888999998865 457999999999999999999999986432111 011111110000
Q ss_pred cc--cchh---cc----cccc----CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 KR--LDAI---VD----RNLN----KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 ~~--~~~~---~~----~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. .... .+ +... ....+.....+.+++.+|++.+|++||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 0000 00 0000 0001234467899999999999999999999875
No 305
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1e-34 Score=294.69 Aligned_cols=262 Identities=22% Similarity=0.307 Sum_probs=198.0
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC--CcceeEec
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLLVYP 371 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 371 (619)
|++.+.||+|+||.||+|... +|+.+|+|++.... .......+.+|++++++++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999976 58999999997543 233456788999999999999999999999887 78999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++ +|..++.... ..+++..+..++.|+++||+|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9985 7877776532 3588999999999999999999999 9999999999999999999999999999877544
Q ss_pred CcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh--hcccchh
Q 007073 452 KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER--EKRLDAI 528 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 528 (619)
.........++..|+|||.+.+ ..++.++||||||+++|||+||+.||....... ........... .......
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE----QLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCchhhcccc
Confidence 3222333456889999998765 457999999999999999999999986433211 01111110000 0000000
Q ss_pred --------------ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 --------------VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 --------------~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
....+...+....+..+.+++.+||+.+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000001112567899999999999999999999875
No 306
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.9e-35 Score=297.37 Aligned_cols=245 Identities=21% Similarity=0.276 Sum_probs=195.8
Q ss_pred ccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccc
Q 007073 298 EKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
....||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++|+||++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc-cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 3457999999999999964 68999999985432 334567889999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCccee
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 456 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 456 (619)
+|...+.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........ ..
T Consensus 104 ~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-~~ 174 (297)
T cd06659 104 ALTDIVSQ-----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KR 174 (297)
T ss_pred CHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-cc
Confidence 99887754 2378899999999999999999999 999999999999999999999999999875543221 22
Q ss_pred eeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCC
Q 007073 457 TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKN 536 (619)
Q Consensus 457 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 536 (619)
....|+..|+|||.+.+..++.++|||||||++|||++|+.||...... ......... .. ... .
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~-~~-----~~~--~ 238 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--------QAMKRLRDS-PP-----PKL--K 238 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcc-CC-----CCc--c
Confidence 3356899999999999889999999999999999999999998642211 111111100 00 000 0
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 537 YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 537 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........+.+++.+|++.+|++||++.++++
T Consensus 239 ~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 239 NAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 01122356889999999999999999999987
No 307
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=8.6e-35 Score=291.43 Aligned_cols=243 Identities=22% Similarity=0.285 Sum_probs=194.9
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchh
Q 007073 302 LGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSV 378 (619)
Q Consensus 302 lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 378 (619)
||.|+||.||++... +++.||+|.+..... ....+.+.+|+.+++.++||||+++++++..+...++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999975 489999999864332 23457789999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeee
Q 007073 379 AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ 458 (619)
Q Consensus 379 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 458 (619)
.+++.... .++...+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~ 151 (262)
T cd05572 81 WTILRDRG----LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWT 151 (262)
T ss_pred HHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccc
Confidence 99997632 378889999999999999999998 99999999999999999999999999998765432 2223
Q ss_pred ccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCC
Q 007073 459 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYN 538 (619)
Q Consensus 459 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 538 (619)
..|+..|+|||.+.+..++.++|+||||+++|||++|+.||.....+ . ....... ........++
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~---~~~~~~~---------~~~~~~~~~~ 216 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED---P---MEIYNDI---------LKGNGKLEFP 216 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---H---HHHHHHH---------hccCCCCCCC
Confidence 46788999999998888999999999999999999999999653310 0 1111111 1101111122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 007073 539 IQEVETMIQVALLCTQASPEDRPA-----MSEVVR 568 (619)
Q Consensus 539 ~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~ 568 (619)
......+.+++.+||+.+|++||+ ++|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 222568999999999999999999 555543
No 308
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-36 Score=297.90 Aligned_cols=259 Identities=25% Similarity=0.348 Sum_probs=206.9
Q ss_pred ccCHHHHHH-HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceee
Q 007073 283 RYSWRELQL-ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIG 358 (619)
Q Consensus 283 ~~~~~el~~-~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~ 358 (619)
.+.|-|.+. ..+.|+.-++||+|+||.||-+..+ +|+.+|.|++.+.. ...+..-.+.|-.|+.++..+.||.+--
T Consensus 173 QWK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaY 252 (591)
T KOG0986|consen 173 QWKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAY 252 (591)
T ss_pred HHHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEee
Confidence 344445543 4456888899999999999999965 79999999885322 2334556778999999999999999998
Q ss_pred eeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 359 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 359 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
.+.+++..++|+..|.||+|..++.+... ..++...+.-++.+|+.||++||.. +||.||+||+|||+|+.|+++
T Consensus 253 AfeTkd~LClVLtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvR 327 (591)
T KOG0986|consen 253 AFETKDALCLVLTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVR 327 (591)
T ss_pred eecCCCceEEEEEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeE
Confidence 99999999999999999999999987543 5599999999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 439 VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 439 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
|+|.|+|..+..... ....+||.+|||||++++..|+...|.||+||++|||+.|+.||..... +
T Consensus 328 ISDLGLAvei~~g~~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke-------------K 392 (591)
T KOG0986|consen 328 ISDLGLAVEIPEGKP--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE-------------K 392 (591)
T ss_pred eeccceEEecCCCCc--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh-------------h
Confidence 999999998765443 3344799999999999999999999999999999999999999953211 0
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
...++.-..+.. ....++...+++..++....+++||++|-..
T Consensus 393 vk~eEvdrr~~~--~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 393 VKREEVDRRTLE--DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hhHHHHHHHHhc--chhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 000000000010 0123445666788888889999999998543
No 309
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.1e-34 Score=289.24 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=206.4
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|...+.||+|+||.||++... +++.||+|++..... ....+.+.+|+++++.++|+|++++++.+......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999975 689999999864332 24567788999999999999999999999988999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+.+.........+++.....++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999999999987544446689999999999999999999999 99999999999999999999999999998765432
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.......|++.|+|||...+..++.++||||+|+++|+|++|+.||...... +........ ..
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~-~~------- 220 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL--------ELALKILKG-QY------- 220 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH--------HHHHHHhcC-CC-------
Confidence 2233346888999999998888999999999999999999999998643211 111111110 01
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+......+.+++.+||+.+|++||++.++++
T Consensus 221 --~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 221 --PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1112233467899999999999999999999885
No 310
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.4e-34 Score=295.16 Aligned_cols=260 Identities=17% Similarity=0.193 Sum_probs=180.6
Q ss_pred HhcCCcccCccccCCCceEEEEEeCC----CcEEEEEEeccCCCcchH----------HHHHHHHHHHHHccCCCcccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGD----------AAFQREVEMISVAVHRNLLRLI 357 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~----------~~~~~E~~~l~~l~H~niv~l~ 357 (619)
..++|.+.++||+|+||+||+|...+ +..+|+|........... .....+...+..+.|+|+++++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 34679999999999999999999754 345666653221111101 1112233345567899999999
Q ss_pred eeeeCCC----cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC
Q 007073 358 GFCTTPT----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE 433 (619)
Q Consensus 358 ~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 433 (619)
+++.... ..+++++++.. ++.+.+... ...++.....++.|++.||+|||++ +|+||||||+|||++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKLVE-NTKEIFKRI----KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDG 161 (294)
T ss_pred EeeeEecCCceEEEEEEehhcc-CHHHHHHhh----ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcC
Confidence 9765443 23556666543 444444332 1246777889999999999999999 9999999999999999
Q ss_pred CCcEEEcccccceeeccCCcc------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccc
Q 007073 434 DFEAVVGDFGLAKLVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE 507 (619)
Q Consensus 434 ~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~ 507 (619)
++.++|+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 999999999999876432211 11234699999999999999999999999999999999999999975422111
Q ss_pred c-chhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 508 D-DVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 508 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
. .....++...... +... ....+..+.+++..|++.+|++||++.++.+.|+
T Consensus 242 ~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 242 LIHAAKCDFIKRLHE---------GKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHhHHHHHHHhhh---------hhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 0 0000111111111 1100 1112367899999999999999999999998763
No 311
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-35 Score=321.00 Aligned_cols=272 Identities=19% Similarity=0.242 Sum_probs=187.6
Q ss_pred HhcCCcccCccccCCCceEEEEEeCC--CcEEEEEEe--------------cc--CCCcchHHHHHHHHHHHHHccCCCc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLAD--GTKVAVKRL--------------TD--FESPGGDAAFQREVEMISVAVHRNL 353 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~--g~~vAvK~l--------------~~--~~~~~~~~~~~~E~~~l~~l~H~ni 353 (619)
..++|++.+.||+|+||+||++..+. +..++.|.+ .+ .........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35689999999999999999987532 222222211 00 0112234568899999999999999
Q ss_pred cceeeeeeCCCcceeEecccccchhhhhhcccC-CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC
Q 007073 354 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIK-PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD 432 (619)
Q Consensus 354 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 432 (619)
+++++++...+..++|++++.+ ++..++.... .............++.|++.||+|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 9999999999999999999864 5555554321 1112234556778999999999999999 999999999999999
Q ss_pred CCCcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhH
Q 007073 433 EDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLL 512 (619)
Q Consensus 433 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~ 512 (619)
.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|+.++...... .....+
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~-~~~~~~ 380 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG-KPGKQL 380 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC-CHHHHH
Confidence 9999999999999877544333334467999999999999999999999999999999999987543221110 111111
Q ss_pred HHHHHHHhh--hc------ccchhcccc-c---cCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 513 LDHVKKLER--EK------RLDAIVDRN-L---NKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 513 ~~~~~~~~~--~~------~~~~~~~~~-l---~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
......... .. .+...++.. . .... ......++.+++.+|++.||++|||+.|+++
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 111111000 00 000000000 0 0000 0012245678899999999999999999985
No 312
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.1e-35 Score=293.96 Aligned_cols=248 Identities=24% Similarity=0.277 Sum_probs=201.4
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
+|++.+.||+|+||.||+|... +++.||+|.+.... .....+.+.+|++++++++||||+++++++..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999975 68999999986432 22356788999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++... ..++......++.|+++||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 99999999998763 3478889999999999999999999 9999999999999999999999999998865433
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
. ......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||....... ..........
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~--------- 216 (258)
T cd05578 154 T--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI------RDQIRAKQET--------- 216 (258)
T ss_pred c--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH------HHHHHHHhcc---------
Confidence 2 2233458889999999988889999999999999999999999997543210 1111111100
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCH--HHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAM--SEVV 567 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~--~evl 567 (619)
.....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 217 -~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 -ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0111222334688999999999999999999 5544
No 313
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.4e-34 Score=298.26 Aligned_cols=270 Identities=20% Similarity=0.285 Sum_probs=196.7
Q ss_pred CCcccCccccCCCceEEEEEeC---CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCC--Ccce
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA---DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERL 367 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~---~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 367 (619)
+|.+.+.||+|+||.||+|... +++.||+|.+.... .......+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4777889999999999999975 47899999987532 123346678899999999999999999999887 7789
Q ss_pred eEecccccchhhhhhcccCC-CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC----CCcEEEccc
Q 007073 368 LVYPFMQNLSVAYRLREIKP-GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE----DFEAVVGDF 442 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~Df 442 (619)
+||||+++ ++.+.+..... ....++......++.|++.||+|||++ +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999986 56555543322 223688899999999999999999999 9999999999999999 899999999
Q ss_pred ccceeeccCCc--ceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc-----hhHHH
Q 007073 443 GLAKLVDVRKT--NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD-----VLLLD 514 (619)
Q Consensus 443 Gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~-----~~~~~ 514 (619)
|+++....... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||.......... ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 122334678899999988664 57999999999999999999999997543322000 00001
Q ss_pred HHHHHhhh-----------cccchhccccccCCCC---------H--HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 515 HVKKLERE-----------KRLDAIVDRNLNKNYN---------I--QEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 515 ~~~~~~~~-----------~~~~~~~~~~l~~~~~---------~--~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+..+... .......+......+. . .....+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11100000 0000000000000000 0 23357889999999999999999999875
No 314
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3.7e-35 Score=305.34 Aligned_cols=263 Identities=20% Similarity=0.335 Sum_probs=196.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC-----Ccc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 366 (619)
.++|.+.+.||+|+||.||+|... +|+.||+|.+...........+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 467999999999999999999964 68999999986544444556788999999999999999999987544 347
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++|+||+.+ ++...+.. ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~-~l~~~~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 84 YIVQELMET-DLYKLIKT-----QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEehhccc-CHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence 899999975 67666643 2488899999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcc--eeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh---
Q 007073 447 LVDVRKTN--VTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE--- 520 (619)
Q Consensus 447 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 520 (619)
........ ......|+..|+|||.+.+ ..++.++|||||||++|+|+||+.||....... .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-----~~~~~~~~~~~~ 229 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-----QLNLILGVLGTP 229 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHHHcCCC
Confidence 65432221 1223468899999998754 568999999999999999999999996432110 000000000
Q ss_pred hhcccchhcccc-------cc--CC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 521 REKRLDAIVDRN-------LN--KN-----YNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 521 ~~~~~~~~~~~~-------l~--~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..+....+.+.. .. .. ..+.....+.+++.+||+.+|++|||+.++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 230 SQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000000 00 00 011234678899999999999999999999865
No 315
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.7e-34 Score=286.65 Aligned_cols=249 Identities=26% Similarity=0.383 Sum_probs=202.7
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
+|+..+.||+|++|.||++... +++.+++|++..... .....+.+|++++++++|+|++++++++......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 4677889999999999999975 689999999865432 45678999999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++++|.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 80 SGGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred CCCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 9999999887642 3489999999999999999999998 999999999999999999999999999987654332
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ........ ........
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~~~~~~--- 219 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--------KALFKIAT-NGPPGLRN--- 219 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--------HHHHHHHh-cCCCCcCc---
Confidence 23446889999999998888999999999999999999999998643210 00001100 11111111
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.......+.+++.+||+.||++|||+.++++
T Consensus 220 ----~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 ----PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ----ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1112467899999999999999999999875
No 316
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.6e-34 Score=289.90 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=196.7
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC----CCcchHHHHHHHHHHHHHccCCCccceeeeeeCC--Ccc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF----ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TER 366 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 366 (619)
.+|.+.+.||+|+||.||+|... +|+.||+|.+... ........+.+|++++++++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47888999999999999999964 6899999987532 1223456788999999999999999999998764 347
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++++||+++++|.+++.... .+++....+++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG----ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 78999999999999887532 377888899999999999999999 99999999999999999999999999998
Q ss_pred eeccCC--cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 447 LVDVRK--TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 447 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
...... ........|+..|+|||.+.+..++.++|||||||++|||++|+.||...... ..+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~---- 222 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM--------AAIFKIA---- 222 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH--------HHHHHHH----
Confidence 653211 11122345889999999998888999999999999999999999998632110 0111111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........+......+.+++.+|++ +|..||+..+++.
T Consensus 223 -----~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 223 -----TQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -----cCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0111112233445678999999999 5799999998765
No 317
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.5e-34 Score=292.76 Aligned_cols=258 Identities=19% Similarity=0.226 Sum_probs=192.7
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCC--CcceeEec
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTP--TERLLVYP 371 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~--~~~~lv~e 371 (619)
|++.+.||+|+||.||+|... +++.||+|+++............+|+.++.++. |+|++++++++... +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 566789999999999999964 689999999875433333344567888888885 99999999999877 78999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++ ++.+.+.... ..+++..+..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||+++.....
T Consensus 81 ~~~~-~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMDM-NLYELIKGRK---RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCCc-cHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 9974 7777776432 3489999999999999999999999 9999999999999999 99999999999866433
Q ss_pred CcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh---------
Q 007073 452 KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER--------- 521 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 521 (619)
.. .....++..|+|||.+.. ..++.++|||||||++|||++|+.||....... ..........
T Consensus 153 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 225 (282)
T cd07831 153 PP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-----QIAKIHDVLGTPDAEVLKK 225 (282)
T ss_pred CC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-----HHHHHHHHcCCCCHHHHHh
Confidence 22 223457889999997654 557899999999999999999999996432211 1111111000
Q ss_pred --hcccchhcccccc----CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 --EKRLDAIVDRNLN----KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 --~~~~~~~~~~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.........+... .......+..+.+++.+||+.+|++||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 226 FRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred hcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000000000000 0001234578999999999999999999999985
No 318
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3e-35 Score=322.24 Aligned_cols=256 Identities=25% Similarity=0.341 Sum_probs=186.4
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC----
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT---- 364 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 364 (619)
..-..+|+..++||+||||.||+++.+ ||+.||||++.-..+........+|+..+++++|||||+++..+.+..
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 345677888999999999999999976 899999999975545556677889999999999999999875431110
Q ss_pred --------------------------------------------------------------------------------
Q 007073 365 -------------------------------------------------------------------------------- 364 (619)
Q Consensus 365 -------------------------------------------------------------------------------- 364 (619)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -----------------------------------cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHH
Q 007073 365 -----------------------------------ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 409 (619)
Q Consensus 365 -----------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~ 409 (619)
..|+-||||+..++.+.++...-.. .....++++.+|++||+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~---~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS---QRDEAWRLFREILEGLA 711 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch---hhHHHHHHHHHHHHHHH
Confidence 0134456666655555555422111 35567889999999999
Q ss_pred HHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec-----------------cCCcceeeecccccccccccccc
Q 007073 410 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD-----------------VRKTNVTTQVRGTMGHIAPEYLS 472 (619)
Q Consensus 410 ~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~ 472 (619)
|+|+. |||||||||.||++|++..|||+|||+|+... .......+..+||.-|+|||++.
T Consensus 712 YIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 712 YIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 99999 99999999999999999999999999998721 01111334567999999999997
Q ss_pred CC---CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHH
Q 007073 473 TG---KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVA 549 (619)
Q Consensus 473 ~~---~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~ 549 (619)
+. .|+.|+|+||+|||++||+. ||..... . ......+. .+.+..- ..+.......=.+++
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME----R---a~iL~~LR-~g~iP~~------~~f~~~~~~~e~slI 851 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME----R---ASILTNLR-KGSIPEP------ADFFDPEHPEEASLI 851 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhc---cCCchHH----H---HHHHHhcc-cCCCCCC------cccccccchHHHHHH
Confidence 64 49999999999999999985 5543211 0 11111111 1111110 112233344557899
Q ss_pred HhccCCCCCCCCCHHHHHH
Q 007073 550 LLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 550 ~~Cl~~dP~~RPs~~evl~ 568 (619)
.++++.||++|||+.|++.
T Consensus 852 ~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 852 RWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHhcCCCccCCCHHHHhh
Confidence 9999999999999999885
No 319
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=7.7e-35 Score=303.71 Aligned_cols=196 Identities=24% Similarity=0.303 Sum_probs=170.0
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-C-----CCccceeeeeeCCCcce
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-H-----RNLLRLIGFCTTPTERL 367 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~~~~~~~~~~~ 367 (619)
+|++.++||+|+||.|-+|.. ++++.||||++++. +.-..+-..|+.+|..++ | -|+|++++++.-.++.+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~--k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK--KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC--hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 789999999999999999996 46999999999753 334456677999999887 4 48999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC--CcEEEcccccc
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED--FEAVVGDFGLA 445 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfGla 445 (619)
+|+|.+.. +|.++++...-.+ ++....+.++.||+.||.+||+. +|||+||||+|||+.+. ..+||+|||.|
T Consensus 265 iVfELL~~-NLYellK~n~f~G--lsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 265 IVFELLST-NLYELLKNNKFRG--LSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eeehhhhh-hHHHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccc
Confidence 99999865 9999998765433 89999999999999999999999 99999999999999754 47999999999
Q ss_pred eeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
+...... ..+..+..|.|||++.+.+|+.+.||||||||+.||+||.+-|...
T Consensus 339 c~~~q~v----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 339 CFESQRV----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cccCCcc----eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 8654321 2456788999999999999999999999999999999998877654
No 320
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.4e-34 Score=295.50 Aligned_cols=254 Identities=23% Similarity=0.375 Sum_probs=194.7
Q ss_pred HhcCCcccCccccCCCceEEEEEeCC-CcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 369 (619)
..++|++.+.||+|+||.||+|.+.+ ++.||||+++..........+..|+.++.+.. |+||+++++++......+++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 34667888999999999999999864 89999999975544445566777888776665 99999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
|||+.+ ++.+...... ..+++..+.+++.|++.||+|||+ . +|+||||+|+||++++++.+||+|||++..+
T Consensus 93 ~e~~~~-~l~~l~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 93 MELMST-CLDKLLKRIQ---GPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred eeccCc-CHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 999864 5655554422 258889999999999999999997 5 8999999999999999999999999998765
Q ss_pred ccCCcceeeeccccccccccccccCCC----CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGK----SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
..... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... .+.........
T Consensus 166 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~- 235 (296)
T cd06618 166 VDSKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEE- 235 (296)
T ss_pred cCCCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCC-
Confidence 43222 22334788999999987554 789999999999999999999998632110 01111111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
... .. .......++.+++.+||+.||++||++.++++.
T Consensus 236 ~~~-----~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 236 PPS-----LP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCC-----CC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 00 011234578999999999999999999999864
No 321
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2e-34 Score=292.66 Aligned_cols=247 Identities=21% Similarity=0.286 Sum_probs=197.6
Q ss_pred CcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccc
Q 007073 296 FSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQ 374 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 374 (619)
|...+.||+|++|.||++.. .+++.+|+|++... .....+.+.+|+.+++.++||||+++++++...+..++++||++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR-KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc-chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 44457899999999999996 47899999988532 23345668899999999999999999999999999999999999
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
+++|.+++.. ..+++..+..++.|++.|++|||++ +++||||+|+||+++.++.++|+|||.+........
T Consensus 100 ~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~- 170 (285)
T cd06648 100 GGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP- 170 (285)
T ss_pred CCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-
Confidence 9999998875 2378889999999999999999999 999999999999999999999999998875533221
Q ss_pred eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccccc
Q 007073 455 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLN 534 (619)
Q Consensus 455 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 534 (619)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... .......... .. +...
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--------~~~~~~~~~~-~~-----~~~~ 236 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--------LQAMKRIRDN-LP-----PKLK 236 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHhc-CC-----CCCc
Confidence 22234588999999999888899999999999999999999999864221 1111111111 00 0000
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 535 KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 535 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.....+..+.+++.+||+.+|++||++.++++
T Consensus 237 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 237 --NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred --ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 01123457899999999999999999999985
No 322
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.3e-34 Score=285.73 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=204.5
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCC--CcceeEe
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLLVY 370 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 370 (619)
+|...+.||+|++|.||+|... +++.|++|.+..... ....+.+.+|++++++++|+||+++++.+... ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999976 789999999864332 24567889999999999999999999999888 7889999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.... .+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 9999999999987643 589999999999999999999998 999999999999999999999999999987754
Q ss_pred CCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.... ......++..|+|||.+.+...+.++||||||+++|+|++|+.||..... ..........
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~-------- 218 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-------PMAALYKIGS-------- 218 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------hHHHHHhccc--------
Confidence 4321 12334588899999999888899999999999999999999999865330 0111111111
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.......+...+..+.+++.+|++.+|++||++.+++.
T Consensus 219 -~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 219 -SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11111223333578999999999999999999999985
No 323
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2e-34 Score=295.03 Aligned_cols=265 Identities=23% Similarity=0.295 Sum_probs=197.7
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC----
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT---- 364 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 364 (619)
...++|++.+.||+|+||.||+|..+ +|+.||+|+++... .......+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999975 68999999986432 2334457788999999999999999999987654
Q ss_pred ------cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 365 ------ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 365 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
..++|+||+++ ++...+... ...+++..+..++.|++.||+|||+. +|+|+||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 68899999986 555555542 23489999999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007073 439 VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 439 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
|+|||++...............++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .....+.
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-----~~~~~~~ 231 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-----AQLELIS 231 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHH
Confidence 99999998765433222233346788999998865 45789999999999999999999998643211 1111111
Q ss_pred HHhh---hcccchhcc--------------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 518 KLER---EKRLDAIVD--------------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 518 ~~~~---~~~~~~~~~--------------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... ......+.. +..... ....+..+.+++.+||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHhCCCChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1100 000000000 000000 0112467899999999999999999999875
No 324
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.2e-34 Score=300.32 Aligned_cols=265 Identities=19% Similarity=0.269 Sum_probs=196.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC-CCcchHHHHHHHHHHHHHccCCCccceeeeeeCC------
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF-ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------ 363 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 363 (619)
..++|+..+.||+|+||.||+|... +|+.||+|.+... ........+.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999964 7899999998643 2233456678899999999999999999988644
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
...++||||+.+ +|.+.+... ++......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 346899999965 777766531 77888899999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch----------hHH
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV----------LLL 513 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~----------~~~ 513 (619)
+++....... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||........... .+.
T Consensus 164 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 164 LARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred cceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9986543221 2334578899999999999999999999999999999999999864321100000 000
Q ss_pred HHHH----HHh-hhc-----ccchhccccc----cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 514 DHVK----KLE-REK-----RLDAIVDRNL----NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 514 ~~~~----~~~-~~~-----~~~~~~~~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... ... ... .......... ...........+.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000 000 000 0000000000 00001233557889999999999999999999985
No 325
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.5e-34 Score=292.24 Aligned_cols=249 Identities=24% Similarity=0.317 Sum_probs=194.1
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchh
Q 007073 302 LGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSV 378 (619)
Q Consensus 302 lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 378 (619)
||+|+||+||++... +|+.||+|.+.... .......+..|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999864 68999999886422 223345677899999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeee
Q 007073 379 AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ 458 (619)
Q Consensus 379 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 458 (619)
.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+...... .....
T Consensus 81 ~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~ 153 (277)
T cd05577 81 KYHIYNVGE--PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKG 153 (277)
T ss_pred HHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC--Ccccc
Confidence 999876432 3488999999999999999999999 9999999999999999999999999998765431 12233
Q ss_pred ccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCC
Q 007073 459 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYN 538 (619)
Q Consensus 459 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 538 (619)
..++..|+|||.+.+..++.++||||||+++|+|++|+.||......... ...... ... .....+
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~--------~~~--~~~~~~ 218 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-----EELKRR--------TLE--MAVEYP 218 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH-----HHHHhc--------ccc--ccccCC
Confidence 45788999999998888999999999999999999999999643321110 000000 000 001122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHH-HHHHHhc
Q 007073 539 IQEVETMIQVALLCTQASPEDRPAMSE-VVRMLEG 572 (619)
Q Consensus 539 ~~~~~~l~~l~~~Cl~~dP~~RPs~~e-vl~~L~~ 572 (619)
......+.+++.+||+.+|++||++++ ....|..
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 219 DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 233567899999999999999995555 4444433
No 326
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.7e-34 Score=290.79 Aligned_cols=242 Identities=25% Similarity=0.318 Sum_probs=186.2
Q ss_pred ccccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHH---HccCCCccceeeeeeCCCcceeEecccc
Q 007073 301 VLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMIS---VAVHRNLLRLIGFCTTPTERLLVYPFMQ 374 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~---~l~H~niv~l~~~~~~~~~~~lv~e~~~ 374 (619)
+||+|+||.||++... +|+.+|+|.+..... ......+.+|..++. ..+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999974 689999998864322 222334455554444 3479999999999999999999999999
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
+|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~----~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 81 GGDLHYHLSQH----GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 99999888653 2489999999999999999999999 99999999999999999999999999987553322
Q ss_pred eeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccc
Q 007073 455 VTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 455 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
.....|+..|+|||.+.+ ..++.++|||||||++|||+||..||........ ......... .
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~------~~~~~~~~~----------~ 214 (279)
T cd05633 152 -PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------HEIDRMTLT----------V 214 (279)
T ss_pred -ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH------HHHHHHhhc----------C
Confidence 123458999999999864 5589999999999999999999999964321110 001111000 0
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
....+...+.++.+++.+|++.||++|| +++++++
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 1112233456789999999999999999 5887765
No 327
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.3e-34 Score=295.70 Aligned_cols=248 Identities=25% Similarity=0.352 Sum_probs=195.0
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
|...+.||+|+||.||+|... +|..||+|.+.... .......+.+|++++++++|||++++++++..+...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666789999999999999964 68999999986432 223345788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+.+ ++.+.+... ...+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 107 ~~g-~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 107 CLG-SASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CCC-CHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 975 676666432 23488999999999999999999999 9999999999999999999999999998754322
Q ss_pred cceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 453 TNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
....|+..|+|||.+. .+.++.++|||||||++|||++|+.||...... ..........
T Consensus 179 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~------ 240 (317)
T cd06635 179 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNE------ 240 (317)
T ss_pred ----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHhcc------
Confidence 2345888999999874 456899999999999999999999998532110 0011111100
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
............+.+++.+||+.+|.+||++.++++..-.
T Consensus 241 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 241 ---SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred ---CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 0111122344578999999999999999999999975543
No 328
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.1e-34 Score=292.88 Aligned_cols=257 Identities=20% Similarity=0.249 Sum_probs=201.1
Q ss_pred CCcccCccccCCCceEEEEEe----CCCcEEEEEEeccCC---CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFE---SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~----~~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 366 (619)
+|++.+.||+|+||.||++.. .+++.||||.+++.. .....+.+.+|++++.++ +||||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999985 357889999986422 122345688999999999 599999999999988899
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++|+|..++... ..+++.....++.|+++||.|||+. +++||||+|+||+++.++.++|+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR----EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhhc----CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 9999999999999888642 2378888999999999999999999 99999999999999999999999999988
Q ss_pred eeccCCcceeeeccccccccccccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGK--SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
..............|+..|+|||.+.+.. .+.++||||||+++|||+||..||....... ............
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~~~~~~~~~~~-- 227 (288)
T cd05583 154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN----SQSEISRRILKS-- 227 (288)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc----hHHHHHHHHHcc--
Confidence 65443332233446889999999987665 7889999999999999999999985321110 011111111100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
. ...+......+.+++.+||+.+|++|||+.++.+.|+..
T Consensus 228 -----~----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 228 -----K----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred -----C----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0 011222345788999999999999999999998888764
No 329
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.1e-34 Score=293.84 Aligned_cols=264 Identities=19% Similarity=0.268 Sum_probs=194.5
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|+..+.||+|++|+||+|... +|+.||+|.+..... ....+.+.+|++++++++|+||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999975 689999998864322 2334678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-CCcEEEcccccceeecc
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-DFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~~ 450 (619)
|+++ ++...+.... ...+++.....++.|++.||+|||++ +++|+||+|+||+++. ++.+||+|||++.....
T Consensus 82 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLDL-DLKKHMDSSP--DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred cccc-cHHHHHHhCC--CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 9964 7777665422 22357788889999999999999999 9999999999999985 56799999999976543
Q ss_pred CCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--cccc-
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE--KRLD- 526 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 526 (619)
.. .......+++.|+|||.+.+ ..++.++||||||+++|+|+||+.||....... ...........+ ....
T Consensus 156 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 156 PV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID----ELFKIFRILGTPNEETWPG 230 (294)
T ss_pred Cc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChhhccc
Confidence 21 11223457889999998866 457899999999999999999999986432110 111110000000 0000
Q ss_pred -----hhc--cccccC----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 -----AIV--DRNLNK----NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 -----~~~--~~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... .+.... ...+.....+.+++.+|++.+|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 000000 001223456889999999999999999999985
No 330
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.7e-34 Score=289.25 Aligned_cols=247 Identities=22% Similarity=0.307 Sum_probs=196.7
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchh
Q 007073 302 LGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSV 378 (619)
Q Consensus 302 lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 378 (619)
||+|+||.||++... +|+.+|+|.+..... ....+.+.+|++++++++||||+++++.+......++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999986 499999999864321 23456788999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc-----
Q 007073 379 AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT----- 453 (619)
Q Consensus 379 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~----- 453 (619)
.+++.... .+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~~----~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENVG----SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 99987533 488999999999999999999999 999999999999999999999999999876533211
Q ss_pred --ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 454 --NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 454 --~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.......++..|+|||.......+.++||||||+++||++||+.||...... ........ +..
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~------ 218 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--------EIFQNILN-GKI------ 218 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhc-CCc------
Confidence 1223345788999999998888999999999999999999999998643211 11111111 000
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
........+..+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 219 --~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 219 --EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred --CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 000001124678999999999999999999777666654
No 331
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-35 Score=305.07 Aligned_cols=258 Identities=22% Similarity=0.252 Sum_probs=198.9
Q ss_pred CcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC------ccee
Q 007073 296 FSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT------ERLL 368 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~l 368 (619)
+...+.||+|+||.||+|+. .+|+.||||.++........+.+.+|++++++++|+|||+++++-.+.. ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 45567899999999999995 5799999999987766777889999999999999999999998765543 5789
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC----CCCcEEEccccc
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD----EDFEAVVGDFGL 444 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~----~~~~~kl~DfGl 444 (619)
|||||.+|||...|+.-. +..-++..+.+.+..+++.||.|||++ +|+||||||.||++- ....-||+|||.
T Consensus 95 vmEyC~gGsL~~~L~~PE-N~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPE-NAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEeecCCCcHHHHhcCcc-cccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 999999999999998743 345599999999999999999999999 999999999999983 333569999999
Q ss_pred ceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
|+.++... .....+||..|.+||.+.. +.|+..+|.|||||++||..||..||-...-+... ....|......+.
T Consensus 171 Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~--~~~~~~~~tkkp~ 246 (732)
T KOG4250|consen 171 ARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNN--KEIMWHIITKKPS 246 (732)
T ss_pred cccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcccc--chhhhhhhccCCC
Confidence 99876443 5667889999999999984 88999999999999999999999999643322111 0111111111111
Q ss_pred ccchhccccc------------cCCCCHHHHHHHHHHHHhccCCCCCCCC
Q 007073 524 RLDAIVDRNL------------NKNYNIQEVETMIQVALLCTQASPEDRP 561 (619)
Q Consensus 524 ~~~~~~~~~l------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 561 (619)
.......+.. ...........+.+.+..++..+|++|-
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 1111111111 1122355556777788888888998887
No 332
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.8e-34 Score=297.64 Aligned_cols=260 Identities=23% Similarity=0.293 Sum_probs=191.9
Q ss_pred CccccC--CCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQG--GFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G--~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
..||+| +||+||++.+. +|+.||+|.+.... .....+.+.+|+.+++.++||||+++++++..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456766 89999999974 79999999986433 233457788999999999999999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
+++.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYFP--EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 999998876432 2378888899999999999999999 99999999999999999999999998654332111100
Q ss_pred ------eeeccccccccccccccCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH---------
Q 007073 456 ------TTQVRGTMGHIAPEYLSTG--KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK--------- 518 (619)
Q Consensus 456 ------~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~--------- 518 (619)
.....++..|+|||++.+. .++.++|||||||++|||++|+.||....... ........
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~ 234 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ----MLLQKLKGPPYSPLDIT 234 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH----HHHHHhcCCCCCCcccc
Confidence 0112346679999999763 47899999999999999999999986432110 00000000
Q ss_pred -------H----------------hhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 519 -------L----------------EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 519 -------~----------------~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ..........+..+...........+.+++.+||+.||++|||+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred ccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 0000000011111111223345678999999999999999999999985
No 333
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.1e-34 Score=293.77 Aligned_cols=264 Identities=23% Similarity=0.318 Sum_probs=193.0
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc-----
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE----- 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 365 (619)
-++|+..+.||+|+||.||+|... +++.||||.+.... .......+.+|++++++++||||+++++++...+.
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357888999999999999999975 68999999886432 22234456789999999999999999999876543
Q ss_pred ---ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 366 ---RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 366 ---~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
.++||||+.+ ++.+.+... ...+++.....++.|++.||+|||++ +++|+||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNK---NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 4899999975 677766542 23488999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcc---eeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 443 GLAKLVDVRKTN---VTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 443 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
|++......... ......++..|+|||.+.+. .++.++||||||+++|||+||+.||...... ........
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~-----~~~~~~~~ 238 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ-----HQLTLISQ 238 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHH
Confidence 999866432221 12234578899999988664 4789999999999999999999998643211 11111111
Q ss_pred Hhh---hcccch-----hccc-cccCCC---------CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 519 LER---EKRLDA-----IVDR-NLNKNY---------NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 519 ~~~---~~~~~~-----~~~~-~l~~~~---------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... ...... ..+. ...... .......+.+++.+||+.||++|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 239 LCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 100 000000 0000 000000 0011246679999999999999999999875
No 334
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.6e-34 Score=292.89 Aligned_cols=264 Identities=24% Similarity=0.289 Sum_probs=194.8
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCC--Cccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 368 (619)
.++|++.+.||+|+||.||+|... +|+.||+|.++.... ......+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467889999999999999999975 689999999864322 22234567899999999999999999998654 45789
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+.+ +|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 86 v~e~~~~-~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999975 7777776532 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--ccc
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE--KRL 525 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 525 (619)
..... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... .+.........+ ...
T Consensus 159 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~----~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 159 GLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE----QLDLIIQLLGTPNESIW 233 (309)
T ss_pred CCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCChhhc
Confidence 54321 1222345788999998865 457999999999999999999999986432211 111111100000 000
Q ss_pred c---------hh-ccccccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 D---------AI-VDRNLNKNY---NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 ~---------~~-~~~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. .. ......... .......+.+++.+|++.||++|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 00 000000000 0112457789999999999999999999885
No 335
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.4e-34 Score=298.22 Aligned_cols=267 Identities=20% Similarity=0.339 Sum_probs=197.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC-CCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCC--Ccc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF-ESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTP--TER 366 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~--~~~ 366 (619)
..++|++.+.||+|+||.||+|... +|+.+|+|++... ........+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3567888999999999999999975 6889999988542 2233445677899999999 999999999988654 357
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||++ ++|..++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 89999997 4888877642 478889999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCc----ceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH------
Q 007073 447 LVDVRKT----NVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH------ 515 (619)
Q Consensus 447 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~------ 515 (619)
....... .......|+..|+|||.+.+ ..++.++||||||+++|||+||+.||.......... .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~-~~~~~~~~~~~ 234 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLE-KIIEVIGPPSA 234 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCCH
Confidence 6643322 12234568899999998765 457899999999999999999999986432211100 00000
Q ss_pred --HHHHhhhcccchhcc----cccc--CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 516 --VKKLEREKRLDAIVD----RNLN--KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 516 --~~~~~~~~~~~~~~~----~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
...... .....+++ .... ....+..+.++.+++.+||+.+|++|||+.++++.
T Consensus 235 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 235 EDIESIKS-PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHh-hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000 00000010 0000 00111235678999999999999999999999864
No 336
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.8e-34 Score=287.37 Aligned_cols=251 Identities=20% Similarity=0.322 Sum_probs=198.2
Q ss_pred CCcccCccccCCCceEEEEEeCC-CcEEEEEEeccCC----CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFE----SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~~-g~~vAvK~l~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
+|.+.+.||+|+||.||++.... +..+++|.++... .......+..|+.+++.++||||+++++++......++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788999999999999998653 4556666654321 223345677899999999999999999999988899999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+||+++++|.+.+.........+++..+..++.|++.|+.|||+. +++|+||+|+||++++ +.++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999999876555556689999999999999999999999 9999999999999976 569999999998764
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
... .......|+..|+|||.+.+..++.++|+||||+++|+|++|..||..... ......... .
T Consensus 157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--------~~~~~~~~~-~------ 220 (260)
T cd08222 157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--------LSVVLRIVE-G------ 220 (260)
T ss_pred CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHc-C------
Confidence 322 222334578899999999888899999999999999999999999853211 111111110 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.....+...+.++.+++.+||+.+|++||++.++++
T Consensus 221 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 221 ---PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 011123345568899999999999999999999985
No 337
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.1e-34 Score=291.12 Aligned_cols=245 Identities=22% Similarity=0.275 Sum_probs=192.0
Q ss_pred CCcccCccccCCCceEEEEEe----CCCcEEEEEEeccCC---CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFE---SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~----~~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 366 (619)
+|++.+.||+|+||.||++.. .+|..||+|++.... .....+.+.+|+.++.++ +|+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477789999999999999986 368999999986422 122346778899999999 589999999999988889
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++|+||+++++|.+++... ..+++.....++.|+++||.|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQR----ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 9999999999999998753 2378888889999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTG--KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
..............|+..|+|||.+... .++.++||||||+++|+|+||+.||....... ............
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~----~~~~~~~~~~~~-- 227 (290)
T cd05613 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN----SQAEISRRILKS-- 227 (290)
T ss_pred ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc----cHHHHHHHhhcc--
Confidence 7654333333345688999999998753 46889999999999999999999986322110 111111111100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCC
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP 561 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 561 (619)
. ..++......+.+++.+|++.+|++||
T Consensus 228 -----~----~~~~~~~~~~~~~ll~~~l~~~p~~R~ 255 (290)
T cd05613 228 -----E----PPYPQEMSALAKDIIQRLLMKDPKKRL 255 (290)
T ss_pred -----C----CCCCccCCHHHHHHHHHHhcCCHHHhc
Confidence 0 011222345788999999999999997
No 338
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.6e-34 Score=294.96 Aligned_cols=260 Identities=22% Similarity=0.264 Sum_probs=191.0
Q ss_pred cCccccCCCceEEEEEeCCCcEEEEEEeccC-CCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccch
Q 007073 299 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDF-ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLS 377 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 377 (619)
.+.+|.|+++.||++.. +|+.||||++... ......+.+.+|+++++.++|+||+++++++...+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34445555555555555 6899999998754 234456789999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc----
Q 007073 378 VAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT---- 453 (619)
Q Consensus 378 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~---- 453 (619)
|.+++..... ..++......++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+........
T Consensus 86 l~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 86 CEDLLKTHFP--EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 9999976432 2378888899999999999999999 999999999999999999999999999875532211
Q ss_pred --ceeeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh---------
Q 007073 454 --NVTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE--------- 520 (619)
Q Consensus 454 --~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--------- 520 (619)
.......++..|+|||.+.. ..++.++|||||||++|||++|+.||....... ...+......
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ----MLLEKVRGTVPCLLDKSTY 236 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhccCccccccCch
Confidence 11123456788999999866 358899999999999999999999996432110 0111000000
Q ss_pred --hhcccch----hccc----cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 521 --REKRLDA----IVDR----NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 521 --~~~~~~~----~~~~----~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
....... ..+. ............++.+++.+||+.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0000000 0000 0011122344567899999999999999999999885
No 339
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.6e-34 Score=290.29 Aligned_cols=265 Identities=22% Similarity=0.253 Sum_probs=196.9
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeEeccc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
|.+.+.||+|+||+||+|... +++.||||++.............+|+..+++++ |+|++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567789999999999999975 578999999865433333445567999999999 999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
+|+|.+.+.... ...+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++........
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 789988887543 23589999999999999999999999 999999999999999999999999999986643222
Q ss_pred ceeeecccccccccccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch--------hHHHHHHHHhhhcc
Q 007073 454 NVTTQVRGTMGHIAPEYLS-TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV--------LLLDHVKKLEREKR 524 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 524 (619)
.....++..|+|||.+. +..++.++|+||||+++|||+||+.||........... .-..|.........
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 155 --YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred --cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 22345788999999875 45579999999999999999999999864432111000 00001111000001
Q ss_pred cchhcccccc---CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLN---KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
....+..... ....+.....+.+++.+||+.+|++|||++|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 1100000000 0001112467899999999999999999999875
No 340
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=302.05 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=200.3
Q ss_pred cCCcccCccccCCCceEEEEEeCCCcEE-EEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~v-AvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+.|+++..||.|+||.||+|..++.... |.|++ +..+....++|+-|+++|+.++||+||++++.|.-.+..++..||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvI-etkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVI-ETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhh-cccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 3455667899999999999998765554 44554 455566778999999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
|.||..+..+-+.. ..+...++..++.|++.||.|||++ .|||||||+.|||++-+|.++|+|||.+..... .
T Consensus 111 C~GGAVDaimlEL~---r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t 183 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELG---RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-T 183 (1187)
T ss_pred cCCchHhHHHHHhc---cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh-H
Confidence 99999998887643 4589999999999999999999999 999999999999999999999999998764321 2
Q ss_pred cceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 453 TNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
......+.||+.|||||+.. ..+|+.++||||||+++.||..+.+|-..-. .....-.+... ....
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln--------pMRVllKiaKS-ePPT 254 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN--------PMRVLLKIAKS-EPPT 254 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc--------hHHHHHHHhhc-CCCc
Confidence 22345678999999999874 4679999999999999999999998854211 11111111111 1111
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
++ -+..+...+.+++..|+.+||..||++.++++
T Consensus 255 Ll-------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 255 LL-------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred cc-------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 11 14566778999999999999999999999885
No 341
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=9.6e-34 Score=286.98 Aligned_cols=261 Identities=20% Similarity=0.272 Sum_probs=199.4
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
|+..+.||+|++|.||+|... +|+.+|+|++..... ......+.+|++++++++|+||+++++++..+...++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 556788999999999999974 789999999865432 234567889999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
++ ++...+.... ..+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 81 DT-DLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred CC-CHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 75 7877776532 3488999999999999999999999 99999999999999999999999999998765433
Q ss_pred ceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--cccchhcc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE--KRLDAIVD 530 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 530 (619)
.......++..|+|||.+.+. .++.++||||||+++|+|+||+.||......+. ........... .......+
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ----LFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHcCCCchHhcccchh
Confidence 122234578899999998776 789999999999999999999999864332110 00000000000 00000000
Q ss_pred -----------ccc--cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 531 -----------RNL--NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 531 -----------~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... .....+..+..+.+++.+||+.||.+||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000 00112234578999999999999999999999985
No 342
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.6e-34 Score=295.18 Aligned_cols=266 Identities=21% Similarity=0.284 Sum_probs=196.0
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeC-CCcc
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT-PTER 366 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~ 366 (619)
...+++|+..+.||+|+||.||+|... +|+.||+|++.... .....+.+.+|++++++++||||+++++++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 346788999999999999999999965 78999999886432 23345678899999999999999999998866 4568
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++++||+ +++|...+.. ..++......++.|+++||+|||+. +|+||||+|+||++++++.++|+|||.+.
T Consensus 86 ~lv~e~~-~~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 86 YFVTELL-GTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEeehh-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 8999998 4588777753 2367778888999999999999999 99999999999999999999999999987
Q ss_pred eeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH--------HHH
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD--------HVK 517 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~--------~~~ 517 (619)
..... .....++..|+|||.+.+ ..++.++||||||+++|||+||+.||........ .....+ +..
T Consensus 157 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 157 IQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQ-FSIITDLLGTPPDDVIN 231 (328)
T ss_pred ccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHH
Confidence 54322 123457889999998766 5689999999999999999999999864321100 000000 000
Q ss_pred HHhhhcccchhccccccCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 518 KLEREKRLDAIVDRNLNKNYN-----IQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.............-......+ +.....+.+++.+|++.+|++||++.+++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000000000001 1234678999999999999999999998643
No 343
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=7.7e-34 Score=282.66 Aligned_cols=248 Identities=23% Similarity=0.383 Sum_probs=201.7
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|+..+.||+|++|.||++... +++.||+|.+..... ......+.+|++++++++|+|++++++++......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4777899999999999999865 678999999875432 13457789999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++++|.+++... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 9999999988754 3489999999999999999999999 99999999999999999999999999998775433
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.. .....++..|+|||...+..++.++||||+|+++|+|++|+.||..... . ........ ...
T Consensus 154 ~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-----~---~~~~~~~~-~~~------- 216 (254)
T cd06627 154 KD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-----M---AALFRIVQ-DDH------- 216 (254)
T ss_pred cc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-----H---HHHHHHhc-cCC-------
Confidence 32 2334588899999999888889999999999999999999999863221 0 00111110 000
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+......+.+++.+|++.+|++||++.+++.
T Consensus 217 --~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 217 --PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred --CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1112223457889999999999999999999874
No 344
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3e-34 Score=298.20 Aligned_cols=263 Identities=21% Similarity=0.319 Sum_probs=197.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC----Ccc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP----TER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~~~ 366 (619)
.++|++.+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888999999999999999965 69999999987532 223456778899999999999999999987543 457
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++|+||+. ++|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD----QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 89999996 5888887642 2389999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcc---eeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh-
Q 007073 447 LVDVRKTN---VTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER- 521 (619)
Q Consensus 447 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 521 (619)
........ ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~-----~~~~~~~~g~ 230 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ-----LKLILSVLGS 230 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH-----HHHHHHHhCC
Confidence 66432221 1223468899999998865 4689999999999999999999999964322110 000000000
Q ss_pred ----------hcccchhcccc-ccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 ----------EKRLDAIVDRN-LNKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 ----------~~~~~~~~~~~-l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........+.. ..... .+..+..+.+++.+|++.+|++||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 231 PSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred ChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000000000 00000 1223578999999999999999999999886
No 345
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=7.1e-34 Score=291.93 Aligned_cols=248 Identities=27% Similarity=0.342 Sum_probs=194.0
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC--CCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.|...+.||+|+||.||+|... ++..+|+|.+... ........+.+|+++++.++|+|++++++++......++|+|
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3666788999999999999965 6789999988632 222334678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+. |++.+.+... ...+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 96 ~~~-~~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 96 YCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred ccC-CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 997 5777666532 23478899999999999999999999 9999999999999999999999999998765432
Q ss_pred Ccceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 452 KTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
....|+..|+|||.+. ...++.++|||||||++|||++|+.||...... ..........
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~----- 230 (308)
T cd06634 169 -----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNE----- 230 (308)
T ss_pred -----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--------HHHHHHhhcC-----
Confidence 2345788999999874 356789999999999999999999997532110 0001111000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
............+.+++.+||+.+|++||++.++++.-.
T Consensus 231 ----~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 231 ----SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred ----CCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 001112234467889999999999999999999986543
No 346
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.2e-33 Score=282.15 Aligned_cols=245 Identities=20% Similarity=0.228 Sum_probs=189.3
Q ss_pred HHhcCCcccCcc--ccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcc
Q 007073 291 LATDNFSEKNVL--GQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 291 ~~~~~~~~~~~l--g~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 366 (619)
.-.++|++.+.+ |+|+||.||++..+ ++..+|+|......... .|+.....+ +||||+++++++..++..
T Consensus 11 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 11 QFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 334567776666 99999999999964 68899999886422111 122222222 699999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEcccccc
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-EAVVGDFGLA 445 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla 445 (619)
++||||+++++|.+++.... .+++.....++.|+++||.|||+. +++||||||+||+++.++ .++|+|||++
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG----KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 99999999999999987532 589999999999999999999999 999999999999999998 9999999998
Q ss_pred eeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
....... ...|+..|+|||++.+..++.++||||||+++|||+||+.||...... ......+.....
T Consensus 158 ~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~----- 224 (267)
T PHA03390 158 KIIGTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE---ELDLESLLKRQQ----- 224 (267)
T ss_pred eecCCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc---hhhHHHHHHhhc-----
Confidence 8654321 235889999999999989999999999999999999999999743221 111111111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA-MSEVVR 568 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~ 568 (619)
.. .......+..+.+++.+|++.+|.+||+ ++++++
T Consensus 225 -----~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 225 -----KK--LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -----cc--CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 0112234568899999999999999996 588773
No 347
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.1e-33 Score=285.11 Aligned_cols=261 Identities=24% Similarity=0.332 Sum_probs=195.0
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc-chHHHHHHHHHHHHHc---cCCCccceeeeeeCCCc-----
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-GGDAAFQREVEMISVA---VHRNLLRLIGFCTTPTE----- 365 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~----- 365 (619)
|++.+.||+|+||.||+|.++ +++.||+|+++..... .....+.+|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999986 4899999999743322 2235566788877665 59999999999987776
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.+++|||+.+ +|.+++..... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||.+
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK--PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999975 78887765332 2488999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc-
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR- 524 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 524 (619)
........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||...... ...............
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 228 (287)
T cd07838 155 RIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA----DQLDKIFDVIGLPSEE 228 (287)
T ss_pred eeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH----HHHHHHHHHcCCCChH
Confidence 87643322 12334788999999999999999999999999999999999888643211 111111111100000
Q ss_pred --cc------hhcccccc---CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 --LD------AIVDRNLN---KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 --~~------~~~~~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ........ ....+.....+.+++.+||+.||++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00 00000000 0111234567889999999999999999999874
No 348
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7e-34 Score=294.98 Aligned_cols=261 Identities=21% Similarity=0.317 Sum_probs=199.7
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCC-----cce
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-----ERL 367 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 367 (619)
+|.+.+.||+|+||.||+|... +|+.||+|++..... ....+.+.+|+.+++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999975 589999999875432 344577899999999999999999999987765 789
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
++|||+++ +|...+... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 81 lv~e~~~~-~l~~~l~~~----~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELMET-DLHKVIKSP----QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchhh-hHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 99999984 788877643 2589999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCc--ceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh---
Q 007073 448 VDVRKT--NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER--- 521 (619)
Q Consensus 448 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 521 (619)
...... .......++..|+|||.+.+. .++.++||||||+++|+|+||+.||........ .........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-----~~~i~~~~~~~~ 227 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-----LNLIVEVLGTPS 227 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-----HHHHHHhcCCCC
Confidence 654321 122334578899999999887 789999999999999999999999965432110 000000000
Q ss_pred --------hcccchhccc-ccc-----CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 --------EKRLDAIVDR-NLN-----KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 --------~~~~~~~~~~-~l~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.......+.. ... ....+..+..+.+++.+||+.+|++||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 228 EEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred hhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0000000000 000 0001223567899999999999999999999986
No 349
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=6.8e-34 Score=289.69 Aligned_cols=243 Identities=21% Similarity=0.280 Sum_probs=194.3
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchh
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSV 378 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 378 (619)
..||+|+||.||++... +|+.||||++... .......+.+|+.+++.++|+|++++++++...+..++||||+++++|
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEeccc-chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 57999999999999874 7899999987532 234566788999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeee
Q 007073 379 AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ 458 (619)
Q Consensus 379 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 458 (619)
.+++... .+++.....++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++........ ....
T Consensus 105 ~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~ 175 (292)
T cd06657 105 TDIVTHT-----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKS 175 (292)
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc-cccc
Confidence 9877532 378888999999999999999999 999999999999999999999999999876543221 2233
Q ss_pred ccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCC
Q 007073 459 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYN 538 (619)
Q Consensus 459 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 538 (619)
..|+..|+|||.+.+..++.++|+||||+++|||++|+.||...... ......... ....+. ..
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--------~~~~~~~~~------~~~~~~--~~ 239 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDN------LPPKLK--NL 239 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhh------CCcccC--Cc
Confidence 45889999999998888999999999999999999999998642211 111111100 000000 01
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 539 IQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 539 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
......+.+++.+||+.+|.+||++.++++
T Consensus 240 ~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 240 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 122356789999999999999999999886
No 350
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=325.61 Aligned_cols=251 Identities=26% Similarity=0.339 Sum_probs=199.0
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++.....||.|.||.||.|.. .+|.-.|||-++-.. .....+...+|+.++..++|||+|+++|+-...+..++.|||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence 456678999999999999994 578999999775322 233456788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
|++|+|.+.++.. ...++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++|||.|..+....
T Consensus 1316 C~~GsLa~ll~~g----ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHG----RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred hccCcHHHHHHhc----chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 9999999999763 2255666667889999999999999 99999999999999999999999999999875442
Q ss_pred cc---eeeeccccccccccccccCCC---CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 453 TN---VTTQVRGTMGHIAPEYLSTGK---SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 453 ~~---~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
.. ......||+.|||||++.+.. ...+.||||+|||+.||+||++||....-+ -.+.-++. .+.
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne----~aIMy~V~----~gh-- 1458 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE----WAIMYHVA----AGH-- 1458 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch----hHHHhHHh----ccC--
Confidence 11 123467999999999997643 567899999999999999999999632211 11111111 111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.++.+...+.+-.+++..|+..||++|.++.|+++.
T Consensus 1459 -------~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 -------KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -------CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 123344456678899999999999999888877653
No 351
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.2e-34 Score=284.87 Aligned_cols=246 Identities=18% Similarity=0.222 Sum_probs=189.8
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHH-HHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMI-SVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||.||+|... +|+.||+|++..... ......+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999964 689999999864321 12223445555544 455899999999999999999999999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
++|.+++.... .++...+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||+++....
T Consensus 82 ~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKTLG----GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 99999987532 378888999999999999999999 999999999999999999999999999875432
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
.....|+..|+|||.+.+..++.++||||||+++|||+||..||...... ........ .... ...
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~~------~~~ 214 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--------AVFDNILS-RRIN------WPE 214 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHh-cccC------CCC
Confidence 22345888999999998888999999999999999999999998643211 11111110 0000 001
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 536 NYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 536 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
......+..+.+++.+||+.+|++||++.++.+.|..
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 1112334678999999999999999988766665543
No 352
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-35 Score=282.93 Aligned_cols=265 Identities=23% Similarity=0.334 Sum_probs=218.1
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeee
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 360 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 360 (619)
.++.+..++++...++-+|.||.||+|.|. +.+.|-||.++...++-+...+.+|.-++....|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 567778888999999999999999999764 34568899998877887888899999999999999999999998
Q ss_pred eCC-CcceeEecccccchhhhhhcccC----CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 361 TTP-TERLLVYPFMQNLSVAYRLREIK----PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 361 ~~~-~~~~lv~e~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
.+. ...+.+|.++.-|+|..++...+ .....++..+...++.|++.|++|||++ +|||.||.++|.+||+..
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhe
Confidence 664 56788899999999999998432 2234467777888999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCcceee-eccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007073 436 EAVVGDFGLAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 513 (619)
++||+|=.+++.+.+.+.+... .......||+||.+.+..|+.++|||||||++|||+| |+.|+..-.+ .
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP--------f 505 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP--------F 505 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH--------H
Confidence 9999999999987665544322 2234678999999999999999999999999999999 8899853221 2
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
+....+..+.++.. +..++.+++.+|.-||...|++||+++|++.-|.+
T Consensus 506 Em~~ylkdGyRlaQ----------P~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse 554 (563)
T KOG1024|consen 506 EMEHYLKDGYRLAQ----------PFNCPDELFTVMACCWALLPEERPSFSQLVICLSE 554 (563)
T ss_pred HHHHHHhccceecC----------CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 23334444444332 33456789999999999999999999999998865
No 353
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4e-34 Score=297.59 Aligned_cols=262 Identities=20% Similarity=0.300 Sum_probs=196.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC-----Cc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TE 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 365 (619)
.++|.+.+.||+|+||+||+|... +|+.||||.+.... .......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 357888999999999999999964 68999999986432 233455677899999999999999999987654 34
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++|+||+. ++|.+++... ..++......++.|++.||.|||++ +++||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS----QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 789999996 5787777642 3488999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh---
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER--- 521 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 521 (619)
+...... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||....... ..........
T Consensus 156 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~ 229 (337)
T cd07858 156 RTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH-----QLKLITELLGSPS 229 (337)
T ss_pred cccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH-----HHHHHHHHhCCCC
Confidence 8664332 22233457889999998865 468999999999999999999999996432110 0000000000
Q ss_pred --------hcccchhc-------cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 522 --------EKRLDAIV-------DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 522 --------~~~~~~~~-------~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
........ +.... ...+..+..+.+++.+|++.+|++|||++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 230 EEDLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hHHhhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000000 00000 0012334678999999999999999999999865
No 354
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-34 Score=267.57 Aligned_cols=248 Identities=23% Similarity=0.350 Sum_probs=192.6
Q ss_pred ccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEeccccc
Q 007073 298 EKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
....||.|..|.|+++.++ .|...|||.+.+.......+..+..+.++.+. ++|.||+-+||+..+....+.||.|.-
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~ 175 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST 175 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence 3567999999999999975 68999999998776666777788888876655 489999999999999999999999863
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
-...++.... .++++...-++...+..||.||.+++ +|+|||+||+|||+|+.|++|++|||++-++-... .
T Consensus 176 -C~ekLlkrik---~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk--A 247 (391)
T KOG0983|consen 176 -CAEKLLKRIK---GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--A 247 (391)
T ss_pred -HHHHHHHHhc---CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc--c
Confidence 2333343322 23777777889999999999999875 89999999999999999999999999998765433 3
Q ss_pred eeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 456 TTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
.+...|-+.|||||.+. ...|+.++||||||+.++||.||..||..-..+ ... ...+..++. +.
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td----Fe~---ltkvln~eP------P~ 314 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD----FEV---LTKVLNEEP------PL 314 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc----HHH---HHHHHhcCC------CC
Confidence 44557899999999985 446899999999999999999999999753221 111 111111110 11
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+.. ....+..+.+++..|+++|+.+||...++++
T Consensus 315 L~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 315 LPG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CCc--ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 111 1225578899999999999999999999875
No 355
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.9e-34 Score=288.57 Aligned_cols=249 Identities=23% Similarity=0.321 Sum_probs=201.5
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 369 (619)
++|.+.+.||+|+||.||+|... +|+.||+|++.... .....+.+..|+++++++. |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888899999999999999975 79999999986422 2334567889999999998 99999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++.... .+++.....++.|++.||.|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRKYG----SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 99999999999997642 489999999999999999999999 99999999999999999999999999998664
Q ss_pred cCCc-------------------ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch
Q 007073 450 VRKT-------------------NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV 510 (619)
Q Consensus 450 ~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~ 510 (619)
.... .......|+..|+|||......++.++||||||++++++++|+.||..... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~ 228 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-----Y 228 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH-----H
Confidence 3321 122234578899999999888899999999999999999999999864321 0
Q ss_pred hHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH----HHHHH
Q 007073 511 LLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM----SEVVR 568 (619)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~----~evl~ 568 (619)
........ .....+...+..+.+++.+||+.+|++||++ +++++
T Consensus 229 ---~~~~~~~~-----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 229 ---LTFQKILK-----------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---HHHHHHHh-----------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11111110 0011122334678999999999999999999 66553
No 356
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.7e-33 Score=284.71 Aligned_cols=242 Identities=25% Similarity=0.326 Sum_probs=186.1
Q ss_pred ccccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHH---HHHccCCCccceeeeeeCCCcceeEecccc
Q 007073 301 VLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEM---ISVAVHRNLLRLIGFCTTPTERLLVYPFMQ 374 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~---l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 374 (619)
+||+|+||.||+|... +|+.||+|.+..... ......+..|..+ ++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999964 588999998864321 1222334445444 444579999999999999999999999999
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
+|+|.+++... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 g~~L~~~l~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 81 GGDLHYHLSQH----GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 99999888642 3489999999999999999999999 99999999999999999999999999987553221
Q ss_pred eeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccc
Q 007073 455 VTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 455 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
.....|+..|+|||.+.++ .++.++||||+||++|||++|+.||......... . ....... ...
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~-----~-~~~~~~~------~~~-- 216 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-----E-IDRMTLT------MAV-- 216 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH-----H-HHHHhhc------cCC--
Confidence 1234689999999998754 6899999999999999999999999653221110 0 0000000 011
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
..+...+..+.+++.+|++.+|.+|| ++.++++
T Consensus 217 --~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 217 --ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred --CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 11122346789999999999999999 8888874
No 357
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.7e-33 Score=288.31 Aligned_cols=245 Identities=26% Similarity=0.363 Sum_probs=191.2
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
|...+.||+|+||+||+|... +|+.||+|.+.... .......+.+|+++++.++|||++++++++......++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999964 68899999986432 223345788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+. |++.+.+... ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~---~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 96 4666666542 23488999999999999999999999 999999999999999999999999999864321
Q ss_pred cceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 453 TNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.....|+..|+|||.+. ...++.++|||||||++|||++|..||..... . .......... ..
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~---~~~~~~~~~~-~~--- 238 (313)
T cd06633 174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----M---SALYHIAQND-SP--- 238 (313)
T ss_pred ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----H---HHHHHHHhcC-CC---
Confidence 22346888999999984 45688999999999999999999999853221 0 1111111100 00
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..........+.+++.+||+.+|++||++.++++.
T Consensus 239 -----~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 239 -----TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01112223468899999999999999999999853
No 358
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.5e-33 Score=288.04 Aligned_cols=265 Identities=25% Similarity=0.311 Sum_probs=192.0
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc-chHHHHHHHHHHHHHccCCCccceeeeeeCCC------
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-GGDAAFQREVEMISVAVHRNLLRLIGFCTTPT------ 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 364 (619)
.++|++.+.||+|+||.||+|... +++.||+|++...... .....+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999965 6899999988643322 22346778999999999999999999875443
Q ss_pred --cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 365 --ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 365 --~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
..++|+||+.+ ++...+... ...+++..+..++.|+++||+|||++ +|+|+||||+||++++++.++|+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP---SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 35899999875 555555432 23489999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcc----------eeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchh
Q 007073 443 GLAKLVDVRKTN----------VTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVL 511 (619)
Q Consensus 443 Gla~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~ 511 (619)
|+++........ ..+...+++.|+|||.+.+. .++.++|||||||++|||++|+.||........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~---- 235 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ---- 235 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH----
Confidence 999765432211 11234568889999987654 579999999999999999999999864322110
Q ss_pred HHHHHHHHhh--h------cccchhcc----ccccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 512 LLDHVKKLER--E------KRLDAIVD----RNLNKNY---NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 512 ~~~~~~~~~~--~------~~~~~~~~----~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.......... + .......+ ....... .......+.+++.+|++.+|++|||+.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000000 0 00000000 0000000 0112257889999999999999999999875
No 359
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.7e-34 Score=294.75 Aligned_cols=250 Identities=22% Similarity=0.323 Sum_probs=206.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
....|.+...||+|.|+.|..|.+. +|..||+|.+.+... ......+.+|+++|+.++|||||+++.+...+...++|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 4457888999999999999999964 699999999876543 23345688999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||..+|.+.+++..... ........++.|+.+|++|||++ .|+|||||++|||++.+.++||+|||++..+.
T Consensus 134 ~eya~~ge~~~yl~~~gr----~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR----MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEeccCchhHHHHHhccc----chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec
Confidence 999999999999987543 44477888999999999999999 99999999999999999999999999999876
Q ss_pred cCCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
. .......+|++.|.|||++++..| ++++|+||+|+++|-|+.|..||+.....+-. ..+
T Consensus 207 ~--~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr-----------------~rv 267 (596)
T KOG0586|consen 207 Y--GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELR-----------------PRV 267 (596)
T ss_pred c--cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccccc-----------------chh
Confidence 3 334456789999999999998876 78999999999999999999999854332211 111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
+...++- +.-...++.+++++++-.+|.+|++++++.+.
T Consensus 268 l~gk~rI--p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 268 LRGKYRI--PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred eeeeecc--cceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 2222221 11223467889999999999999999998753
No 360
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.1e-33 Score=292.70 Aligned_cols=263 Identities=22% Similarity=0.315 Sum_probs=192.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC------
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT------ 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 364 (619)
.++|...+.||+|+||.||+|... +|+.||||++.... .......+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 468989999999999999999964 68999999986432 2233456889999999999999999999886543
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++|+||+.. ++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 94 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEeccccc-CHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 35899999864 5554432 2378889999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH--hh
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL--ER 521 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~ 521 (619)
++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ......... ..
T Consensus 164 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~ 235 (342)
T cd07879 164 ARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD----QLTQILKVTGVPG 235 (342)
T ss_pred CcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCC
Confidence 8754321 223457889999999876 468999999999999999999999997432110 010000000 00
Q ss_pred hcccc--------hhcc---ccccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--HhcC
Q 007073 522 EKRLD--------AIVD---RNLNKNY---NIQEVETMIQVALLCTQASPEDRPAMSEVVRM--LEGE 573 (619)
Q Consensus 522 ~~~~~--------~~~~---~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~~ 573 (619)
+.... .... ....... .+.....+.+++.+||+.||++||++.+++.. +++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 00000 0000 0000000 01223568899999999999999999999843 5443
No 361
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.7e-33 Score=283.57 Aligned_cols=261 Identities=24% Similarity=0.332 Sum_probs=198.0
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+..|+.++++++|+|++++++++......++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456788999999999999975 58999999987543 2334567889999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 453 (619)
+ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||+|+||++++++.++|+|||.++.......
T Consensus 81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 8 58999887642 3488999999999999999999999 999999999999999999999999999986643322
Q ss_pred ceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh--hc------c
Q 007073 454 NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER--EK------R 524 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~------~ 524 (619)
......++..|+|||.+.+. .++.++||||||+++|||++|+.||....... .+......... +. .
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID----QLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHHHHhCCCcHHHHHhhcc
Confidence 22233457789999998776 78999999999999999999999986432110 00000000000 00 0
Q ss_pred c---chhccccccC---CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 L---DAIVDRNLNK---NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~---~~~~~~~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. .......... ...+.....+.+++.+||+.+|++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 0000000000 001122467999999999999999999999875
No 362
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=6.5e-33 Score=288.37 Aligned_cols=263 Identities=21% Similarity=0.239 Sum_probs=192.9
Q ss_pred cCCc-ccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcc-------------hHHHHHHHHHHHHHccCCCccceee
Q 007073 294 DNFS-EKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPG-------------GDAAFQREVEMISVAVHRNLLRLIG 358 (619)
Q Consensus 294 ~~~~-~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~-------------~~~~~~~E~~~l~~l~H~niv~l~~ 358 (619)
++|. +.+.||+|+||+||+|... +++.||||.+....... ....+.+|+++++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4454 3477999999999999965 68999999886432211 1125778999999999999999999
Q ss_pred eeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 359 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 359 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
++...+..++||||+. |+|.+++... ..++......++.|++.||+|||+. +++|+||+|+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK----IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 9999999999999997 5888887642 3378899999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCC-------------cceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCcc
Q 007073 439 VGDFGLAKLVDVRK-------------TNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRL 504 (619)
Q Consensus 439 l~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~ 504 (619)
|+|||++....... ........++..|+|||.+.+. .++.++|||||||++|||+||+.||.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999998664111 1111223467889999998764 469999999999999999999999864322
Q ss_pred ccccchhHHHHHHHHhhhcc--cchhc--------cccccC---CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 505 EEEDDVLLLDHVKKLEREKR--LDAIV--------DRNLNK---NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~--~~~~~--------~~~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. .+.........+.. ..... ...... .........+.+++.+|++.+|++||++++++.
T Consensus 240 ~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 240 ID----QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HH----HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 11 01111111000000 00000 000000 001122457889999999999999999999985
No 363
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=8.3e-33 Score=288.56 Aligned_cols=266 Identities=22% Similarity=0.285 Sum_probs=196.3
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC-
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP- 363 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~- 363 (619)
.++...+++|.+.+.||+|+||.||+|.. .+|+.||+|++.... .....+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 45666789999999999999999999985 478999999986432 223346678899999999999999999988543
Q ss_pred -----CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 364 -----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 364 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
...+++++++ +++|.+.+.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEE
Confidence 2356777776 6788777653 2378899999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007073 439 VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 439 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
|+|||+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .+.....
T Consensus 161 l~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~----~~~~~~~ 232 (345)
T cd07877 161 ILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID----QLKLILR 232 (345)
T ss_pred Eeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHH
Confidence 9999998754321 233457889999998866 568899999999999999999999985432110 0001000
Q ss_pred HHh--hhcccchh-----------ccccccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 518 KLE--REKRLDAI-----------VDRNLNKNY---NIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 518 ~~~--~~~~~~~~-----------~~~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
... .......+ +.......+ .......+.+++.+|++.||++||++.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000 00000000 000000000 00124578899999999999999999988853
No 364
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=274.22 Aligned_cols=242 Identities=24% Similarity=0.287 Sum_probs=198.4
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
-++|...++||+|.||.|..++-+ +|+.+|+|++++.. ..+....-+.|-++++..+||.+..+--.+++.++.+.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 356777899999999999999954 79999999998643 233455667899999999999999998889999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||..||.|..+|... ..++....+-+-..|..||.|||++ +||.||+|-+|.|+|.+|++||+|||+++.-
T Consensus 247 MeyanGGeLf~HLsre----r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~- 318 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE----RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE- 318 (516)
T ss_pred EEEccCceEeeehhhh----hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc-
Confidence 9999999999998763 3478888888899999999999999 9999999999999999999999999999843
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
......+..++||+.|+|||++....|..++|.|.+||++|||++|+.||....-+ .+.+ -++
T Consensus 319 I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~-----kLFe------------LIl 381 (516)
T KOG0690|consen 319 IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE-----KLFE------------LIL 381 (516)
T ss_pred ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh-----HHHH------------HHH
Confidence 33445567789999999999999999999999999999999999999999642211 0111 011
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCC
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRP 561 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 561 (619)
-..+ .++.....+...|+...+.+||++|-
T Consensus 382 ~ed~--kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 382 MEDL--KFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred hhhc--cCCccCCHHHHHHHHHHhhcChHhhc
Confidence 1111 12333445678888899999999995
No 365
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=9.7e-33 Score=287.81 Aligned_cols=259 Identities=24% Similarity=0.335 Sum_probs=193.8
Q ss_pred HhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC-----
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT----- 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 364 (619)
..++|.+.+.||+|+||.||+|.. .+|+.||||++.... .......+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 567899999999999999999985 478999999986432 2223456889999999999999999999886553
Q ss_pred -cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 365 -ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 365 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
..++||||+ +++|..++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999998 6688777753 2378999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH-----
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK----- 517 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~----- 517 (619)
++...... .....+++.|+|||.+.+ ..++.++|+||||+++|++++|+.||....... .......
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~ 235 (343)
T cd07880 164 LARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD----QLMEIMKVTGTP 235 (343)
T ss_pred cccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCC
Confidence 99765322 223457889999998876 458899999999999999999999986432110 0000000
Q ss_pred ------HHhhhcccchhccc--ccc----CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 518 ------KLEREKRLDAIVDR--NLN----KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 518 ------~~~~~~~~~~~~~~--~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... ......... ... ..........+.+++.+|++.||++|||+.+++.
T Consensus 236 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 236 SKEFVQKLQS-EDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CHHHHHhhcc-hhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 000000000 000 0001123346889999999999999999999883
No 366
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=272.58 Aligned_cols=255 Identities=21% Similarity=0.300 Sum_probs=192.9
Q ss_pred ccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHH-HHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 298 EKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMI-SVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
....||.|+||+|++-.++ .|+..|||+++........++++.|.+.. +.-++||||+++|.+..++..++-||.|.-
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~ 147 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI 147 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh
Confidence 3467999999999999975 69999999998766666778899999875 455799999999999999999999999964
Q ss_pred chhhhhhcc-cCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007073 376 LSVAYRLRE-IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 376 gsL~~~l~~-~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
|++.+-.. +.-....+++...-+|..-..+||.||.+.. .|||||+||+|||+|..|.+||+|||++-.+.. +.
T Consensus 148 -SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~--Si 222 (361)
T KOG1006|consen 148 -SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD--SI 222 (361)
T ss_pred -hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH--HH
Confidence 44433321 1122344777777888888899999998764 899999999999999999999999999875532 22
Q ss_pred eeeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 455 VTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 455 ~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
..+.-+|-..|||||.+.. ..|+.+|||||+|+++||+.||+.|+..... +.+.+......... .+..
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-------vfeql~~Vv~gdpp-~l~~-- 292 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-------VFEQLCQVVIGDPP-ILLF-- 292 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-------HHHHHHHHHcCCCC-eecC--
Confidence 3344568889999999853 3489999999999999999999999863221 22222222211111 1110
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..-.......+.+++.-|+.+|-++||++.++.++
T Consensus 293 --~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 293 --DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred --cccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11123456789999999999999999999988753
No 367
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4e-33 Score=290.62 Aligned_cols=261 Identities=22% Similarity=0.304 Sum_probs=190.5
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC---------
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--------- 363 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------- 363 (619)
.+|...+.||+|+||.||+|... +|+.||+|.+.... ....+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC-CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 57888999999999999999964 68999999886433 34557788999999999999999999876543
Q ss_pred -----CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCcE
Q 007073 364 -----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-EDFEA 437 (619)
Q Consensus 364 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~ 437 (619)
...++|+||++ ++|.+.+.. ..+++.....++.|++.||.|||+. +|+||||||+||+++ +++.+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceE
Confidence 24689999997 478777653 2378899999999999999999999 999999999999997 45678
Q ss_pred EEcccccceeeccCCcc--eeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007073 438 VVGDFGLAKLVDVRKTN--VTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 438 kl~DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 514 (619)
|++|||+++........ ......++..|+|||.+.. ..++.++|||||||++|||++|+.||......... ..
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~----~~ 230 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQM----QL 230 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HH
Confidence 99999999865432111 1123357889999997754 56789999999999999999999999643221110 00
Q ss_pred HHHHHh------hhcc---c-chhccccccCC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 515 HVKKLE------REKR---L-DAIVDRNLNKN-----YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 515 ~~~~~~------~~~~---~-~~~~~~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...... .... . ........... ..+....++.+++.+|++.||++|||+.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 231 ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000000 0000 0 00000000000 01123357889999999999999999999984
No 368
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.7e-32 Score=284.77 Aligned_cols=265 Identities=20% Similarity=0.239 Sum_probs=189.6
Q ss_pred CCcccCccccCCCceEEEEEeC-C--CcEEEEEEeccCC-CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCC----Cc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-D--GTKVAVKRLTDFE-SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTP----TE 365 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~--g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~----~~ 365 (619)
+|++.+.||+|+||.||++... . +..||+|++.... .....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777889999999999999965 3 7899999986432 223356788999999998 599999999875432 34
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.+++++|+. ++|...+... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG----QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 677888876 5888877542 3488999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc---eeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhH-------HH
Q 007073 446 KLVDVRKTN---VTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLL-------LD 514 (619)
Q Consensus 446 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~-------~~ 514 (619)
+........ ......|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||............. ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 865432211 1223468999999998765 468999999999999999999999986433210000000 00
Q ss_pred HHHHHhhhcc--cchhcccccc---CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 007073 515 HVKKLEREKR--LDAIVDRNLN---KNYNIQEVETMIQVALLCTQASPEDRPAMSEVV 567 (619)
Q Consensus 515 ~~~~~~~~~~--~~~~~~~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 567 (619)
.......+.. .......... ....+.....+.+++.+|++.+|++|||+.+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 0000000000 0000000000 000111245788999999999999999999986
No 369
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-34 Score=308.74 Aligned_cols=259 Identities=22% Similarity=0.279 Sum_probs=210.5
Q ss_pred HHHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeC
Q 007073 286 WRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT 362 (619)
Q Consensus 286 ~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 362 (619)
.+++....++|.+.++||+|+||.|..++++ +++.||+|++.+.. ......-|..|-.+|.-.+.+=|+.++-.|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 4677888899999999999999999999975 68899999997633 13345678899999998889999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
+...|+|||||+||+|..++..+. .++...++-++..|.-||.-+|+. |+|||||||+|||+|..|++||+||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccc
Confidence 999999999999999999998754 488888889999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeecccccccccccccc----C-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLS----T-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
|.+-.+..+..-.....+|||-|++||+++ + +.|++.+|+||+||++|||+.|..||...+ ++.-+.
T Consensus 220 GsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads--------lveTY~ 291 (1317)
T KOG0612|consen 220 GSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS--------LVETYG 291 (1317)
T ss_pred hhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH--------HHHHHH
Confidence 999988877777777788999999999995 3 678999999999999999999999997543 223333
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC---HHHHH
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA---MSEVV 567 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl 567 (619)
++-.....-...+ ..+.+++..+||.+.+. +|+.|-. .+++-
T Consensus 292 KIm~hk~~l~FP~-------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 292 KIMNHKESLSFPD-------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred HHhchhhhcCCCc-------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 3222211111110 12344667778877664 6777776 55543
No 370
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=7.7e-33 Score=288.63 Aligned_cols=260 Identities=24% Similarity=0.313 Sum_probs=195.0
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc----
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE---- 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 365 (619)
..++|+..+.||+|+||.||+|... +++.||||++.... .......+.+|+.++++++|+|++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4567999999999999999999975 68899999886432 23344667789999999999999999998766554
Q ss_pred --ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 366 --RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 366 --~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 78999998 5688887764 2488999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh-
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER- 521 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 521 (619)
++...... .....++..|+|||.+.+ ..++.++||||||+++|||+||+.||........ +.........
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~----~~~i~~~~~~~ 235 (343)
T cd07851 164 LARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ----LKRIMNLVGTP 235 (343)
T ss_pred cccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHhcCCC
Confidence 99865332 233457889999998865 4678999999999999999999999864321100 0000000000
Q ss_pred -hcc--------cchhcc---ccccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 -EKR--------LDAIVD---RNLNKNY---NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 -~~~--------~~~~~~---~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+.. ....+. ......+ ....+..+.+++.+|++.+|++|||+.+|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 236 DEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000 000000 0000000 0112568899999999999999999999874
No 371
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.1e-32 Score=273.89 Aligned_cols=237 Identities=24% Similarity=0.241 Sum_probs=192.6
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchh
Q 007073 302 LGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSV 378 (619)
Q Consensus 302 lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 378 (619)
||+|+||.||++... +++.+|+|.+..... ......+..|+.++++++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999975 589999999865332 22456788999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeee
Q 007073 379 AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ 458 (619)
Q Consensus 379 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 458 (619)
.+++.... .+++.....++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++....... .....
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 152 (250)
T cd05123 81 FSHLSKEG----RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNT 152 (250)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccC
Confidence 99987532 488999999999999999999998 99999999999999999999999999998764332 12334
Q ss_pred ccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCC
Q 007073 459 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYN 538 (619)
Q Consensus 459 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 538 (619)
..++..|+|||...+...+.++|+||||+++||+++|+.||..... ......... . . ...+
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~-~--------~--~~~~ 213 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILK-D--------P--LRFP 213 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhc-C--------C--CCCC
Confidence 5678899999999888899999999999999999999999864321 111111111 0 0 0112
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHH
Q 007073 539 IQEVETMIQVALLCTQASPEDRPAMSE 565 (619)
Q Consensus 539 ~~~~~~l~~l~~~Cl~~dP~~RPs~~e 565 (619)
...+..+.+++.+||..||++||++.+
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 222467889999999999999999954
No 372
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.2e-33 Score=264.95 Aligned_cols=208 Identities=23% Similarity=0.336 Sum_probs=171.0
Q ss_pred HhcCCcccCccccCCCceEEEEEeCC-----CcEEEEEEeccCCCc-chHHHHHHHHHHHHHccCCCccceeeeeeC-CC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLAD-----GTKVAVKRLTDFESP-GGDAAFQREVEMISVAVHRNLLRLIGFCTT-PT 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~ 364 (619)
....|+....||+|.||.||+|+-++ .+.+|+|+++..... +-.....+|+.+++.++|||++.+..++.+ +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 34568889999999999999997432 236999999754332 234567899999999999999999998877 67
Q ss_pred cceeEecccccchhhhhhcccCC-CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC----CcEEE
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKP-GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED----FEAVV 439 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl 439 (619)
..++++||.+. +|...++.... ....++...+++|+.||..|+.|||++ =|+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 78999999987 77777754322 234688889999999999999999999 79999999999999877 99999
Q ss_pred cccccceeeccCCc--ceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCc
Q 007073 440 GDFGLAKLVDVRKT--NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSR 503 (619)
Q Consensus 440 ~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~ 503 (619)
+|+|+++.+...-. .....++-|..|.|||.+.+. .||.+.||||.||+..||+|-++-|....
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchh
Confidence 99999998854322 233456779999999998875 58999999999999999999988886543
No 373
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-32 Score=261.68 Aligned_cols=255 Identities=21% Similarity=0.299 Sum_probs=194.7
Q ss_pred cCccccCCCceEEEEE-eCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeEecccccc
Q 007073 299 KNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
.++||+|+|+.|--++ ..+|..||||++.+. .........+|++++.+.+ |+||+.++++++++...|||||-|.||
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GG 161 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGG 161 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCc
Confidence 3689999999999998 578999999999765 3456678889999998885 999999999999999999999999999
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEcccccceeeccCC-
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRK- 452 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGla~~~~~~~- 452 (619)
.|..++++.+ .++..+..++..+||.||.|||.+ ||.|||+||+|||...... +||+||.+..-+....
T Consensus 162 plLshI~~~~----~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~ 234 (463)
T KOG0607|consen 162 PLLSHIQKRK----HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND 234 (463)
T ss_pred hHHHHHHHhh----hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCC
Confidence 9999998744 388899999999999999999999 9999999999999976544 7999999876542211
Q ss_pred -----cceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCcc---ccccchhHHHHHHHH
Q 007073 453 -----TNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRL---EEEDDVLLLDHVKKL 519 (619)
Q Consensus 453 -----~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~---~~~~~~~~~~~~~~~ 519 (619)
+......+|+..|||||+.. ...|+.++|.||+|||+|-|++|..||...-- ....+..- ...+
T Consensus 235 ~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C-r~CQ-- 311 (463)
T KOG0607|consen 235 CSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC-RVCQ-- 311 (463)
T ss_pred CCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc-HHHH--
Confidence 11223456888999999763 34588999999999999999999999964221 11111111 0011
Q ss_pred hhhcccchhccccccCCCCH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 520 EREKRLDAIVDRNLNKNYNI----QEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..-...+.++.. .++. ..+.+..+++...+..++.+|-++.++++
T Consensus 312 --~~LFesIQEGkY--eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 312 --NKLFESIQEGKY--EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred --HHHHHHHhccCC--cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 011112222221 1232 33456678888899999999999988886
No 374
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-33 Score=264.05 Aligned_cols=254 Identities=22% Similarity=0.268 Sum_probs=196.1
Q ss_pred HhcCCccc-CccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHH-HHccCCCccceeeeeeCC----C
Q 007073 292 ATDNFSEK-NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMI-SVAVHRNLLRLIGFCTTP----T 364 (619)
Q Consensus 292 ~~~~~~~~-~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~----~ 364 (619)
.+++|.+. ++||-|-.|.|-.+..+ +|+++|+|++.+. ....+|++.- ..-.|||||.+++++... .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS------PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 45566553 68999999999999965 7999999998642 3456788874 445699999999998653 4
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEcc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGD 441 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~D 441 (619)
..++|||.|+||.|...+.+.. ...+++.+...|+.||+.|+.|||+. +|.||||||+|+|.+. |-.+||+|
T Consensus 133 cLLiVmE~meGGeLfsriq~~g--~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRG--DQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred eeEeeeecccchHHHHHHHHcc--cccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecc
Confidence 5788999999999999998753 45689999999999999999999999 9999999999999964 56789999
Q ss_pred cccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
||+|+..... ......+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||....- ..+....++...
T Consensus 208 fGFAK~t~~~--~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg-----~aispgMk~rI~ 280 (400)
T KOG0604|consen 208 FGFAKETQEP--GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-----LAISPGMKRRIR 280 (400)
T ss_pred cccccccCCC--ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC-----ccCChhHHhHhh
Confidence 9999865432 223345679999999999999999999999999999999999999963221 111111121111
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.+... +...-..+.++...++++..++.+|.+|-|++++++.
T Consensus 281 ~gqy~------FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 281 TGQYE------FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ccCcc------CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 11110 0111134556788899999999999999999999853
No 375
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=3.2e-32 Score=306.02 Aligned_cols=146 Identities=26% Similarity=0.350 Sum_probs=130.3
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|.+.+.||+|+||+||+|.+. +++.||||+++... .......+..|+.+++.++|+||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999976 68999999986432 2223467889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
||+.+++|.+++.... .+++...+.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~----~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG----YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999987532 378888999999999999999999 99999999999999999999999999986
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.98 E-value=4.2e-32 Score=267.87 Aligned_cols=220 Identities=20% Similarity=0.161 Sum_probs=175.8
Q ss_pred CCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchhhhhhc
Q 007073 305 GGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLR 383 (619)
Q Consensus 305 G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 383 (619)
|.||.||++... +|+.||+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence 899999999964 78999999986422 23445555566679999999999999999999999999999999887
Q ss_pred ccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeeccccc
Q 007073 384 EIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 463 (619)
Q Consensus 384 ~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~ 463 (619)
... .+++.....++.|+++||+|||++ +|+||||||+||+++.++.++++|||.+...... .....++.
T Consensus 78 ~~~----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~ 146 (237)
T cd05576 78 KFL----NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVEN 146 (237)
T ss_pred Hhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCc
Confidence 532 388999999999999999999999 9999999999999999999999999987654322 12234577
Q ss_pred cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHH
Q 007073 464 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVE 543 (619)
Q Consensus 464 ~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 543 (619)
.|+|||.+.+..++.++||||+|+++|||++|+.|+........ .... ...+.....
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~-------------------~~~~----~~~~~~~~~ 203 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN-------------------THTT----LNIPEWVSE 203 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc-------------------cccc----cCCcccCCH
Confidence 89999999888899999999999999999999988653211000 0000 011122345
Q ss_pred HHHHHHHhccCCCCCCCCCHH
Q 007073 544 TMIQVALLCTQASPEDRPAMS 564 (619)
Q Consensus 544 ~l~~l~~~Cl~~dP~~RPs~~ 564 (619)
.+.+++.+|++.||++||++.
T Consensus 204 ~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 204 EARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHHHHccCCHHHhcCCC
Confidence 788999999999999999973
No 377
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.98 E-value=9.4e-33 Score=247.72 Aligned_cols=211 Identities=22% Similarity=0.320 Sum_probs=177.0
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHH-HccCCCccceeeeeeCCC
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMIS-VAVHRNLLRLIGFCTTPT 364 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~~~ 364 (619)
+.+++..+.......||+|++|.|-+-++ .+|+..|||++......+..+..+.|+.+.. ...+|.+|.++|......
T Consensus 39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 34556666677778899999999988885 4799999999986665666778888998754 567999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++.||.|.- ||+.+-.+....+..+++...-+|+..+.+||.|||++- .++|||+||+|||++.+|++|++|||+
T Consensus 119 dvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 119 DVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred cEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccccc
Confidence 99999999975 777777666556677899999999999999999999975 799999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccC----CCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLST----GKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
+-.+.+. -..+...|-..|||||.+.. ..|+.|+||||+|+.+.||.+++.||+..
T Consensus 196 sG~L~dS--iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 196 SGYLVDS--IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred ceeehhh--hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 9876432 22233457889999998853 36899999999999999999999999754
No 378
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7e-33 Score=271.25 Aligned_cols=244 Identities=24% Similarity=0.311 Sum_probs=197.3
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc--chHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcc
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP--GGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 366 (619)
+...+|....+||+|+||.|..|..+ +.+-+|||++++..-. +..+--+.|-++|+.. +-|.++.++.++++.++.
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 34457888899999999999999976 3467999999865422 2233345677777766 468899999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
+.||||+.||+|-+.++.... +..+.+.-+|..||-||-+||++ +|+.||||.+||++|.+|++||+|||+++
T Consensus 426 yFVMEyvnGGDLMyhiQQ~Gk----FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcK 498 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGK----FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 498 (683)
T ss_pred eeEEEEecCchhhhHHHHhcc----cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccc
Confidence 999999999999999987544 77778888999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
.-- -+...+...+||+.|+|||++...+|+..+|+|||||++|||+.|..||+....++ + ..
T Consensus 499 Eni-~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e-----l------------F~ 560 (683)
T KOG0696|consen 499 ENI-FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-----L------------FQ 560 (683)
T ss_pred ccc-cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH-----H------------HH
Confidence 532 23344567889999999999999999999999999999999999999998643221 1 11
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP 561 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 561 (619)
.+.+.+. .++...+.+..++....+.+.|.+|-
T Consensus 561 aI~ehnv--syPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 561 AIMEHNV--SYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred HHHHccC--cCcccccHHHHHHHHHHhhcCCcccc
Confidence 2233222 34555566778888899999999994
No 379
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=4.4e-32 Score=238.03 Aligned_cols=262 Identities=21% Similarity=0.312 Sum_probs=193.1
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+|...++||+|.||+||+|+. .+++.||+|+++-... .+--....+|+-+++.++|.|||+++++...+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 355567899999999999995 4688999999974433 33345678999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+.. +|..+..... ..++....++++.|+.+||.++|++ ++.|||+||.|.||+.+|++|++|||+++.++...
T Consensus 83 cdq-dlkkyfdsln---g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLN---GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhH-HHHHHHHhcC---CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 975 6666665432 2378889999999999999999999 99999999999999999999999999999776543
Q ss_pred cceeeeccccccccccccccCCC-CCcchhhHHHHHHHHHHHhCCCC-CCCCccccccchhHHHHHHHHh---hhcc--c
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRA-IDFSRLEEEDDVLLLDHVKKLE---REKR--L 525 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~---~~~~--~ 525 (619)
. ..+..+-|..|.+|.++.+.+ |++..|+||-||++.|+.....| |..... +..+....+.+. ...+ +
T Consensus 156 r-cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv----ddqlkrif~~lg~p~ed~wps~ 230 (292)
T KOG0662|consen 156 R-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV----DDQLKRIFRLLGTPTEDQWPSM 230 (292)
T ss_pred E-eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH----HHHHHHHHHHhCCCccccCCcc
Confidence 2 233445689999999998755 89999999999999999985444 443222 111222222111 1111 1
Q ss_pred chhccccccCCCC---------HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 DAIVDRNLNKNYN---------IQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 ~~~~~~~l~~~~~---------~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+.|-..-+.++ +.....-.+++...+.-+|.+|.++++.++
T Consensus 231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 1111211111111 222234457777888889999999988765
No 380
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=2.9e-31 Score=261.46 Aligned_cols=239 Identities=27% Similarity=0.333 Sum_probs=192.6
Q ss_pred CCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchhhhhhcc
Q 007073 306 GFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRE 384 (619)
Q Consensus 306 ~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 384 (619)
+||.||+|... +|+.+|+|++.........+.+.+|++.+++++|+|++++++++......++++||+++++|..++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999986 48999999987544333368899999999999999999999999999999999999999999998876
Q ss_pred cCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeecccccc
Q 007073 385 IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 464 (619)
Q Consensus 385 ~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~ 464 (619)
... +++..+..++.++++++.|||+. +++|+||+|+||++++++.++++|||.+....... ......++..
T Consensus 81 ~~~----~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~ 151 (244)
T smart00220 81 RGR----LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPE 151 (244)
T ss_pred ccC----CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcC
Confidence 332 78899999999999999999999 99999999999999999999999999998765432 2334457889
Q ss_pred ccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHH
Q 007073 465 HIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVET 544 (619)
Q Consensus 465 y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 544 (619)
|++||.+.+..++.++||||||+++|+|++|..||..... .. ........... .. .........+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~----~~---~~~~~~~~~~~-~~-------~~~~~~~~~~ 216 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ----LL---ELFKKIGKPKP-PF-------PPPEWKISPE 216 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----HH---HHHHHHhccCC-CC-------ccccccCCHH
Confidence 9999999888899999999999999999999999864211 01 11111111000 00 0000013467
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHH
Q 007073 545 MIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 545 l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+.+++.+|+..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 899999999999999999999986
No 381
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-32 Score=282.35 Aligned_cols=239 Identities=20% Similarity=0.278 Sum_probs=191.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHH-ccCCCccceeeeeeCCCcceeEe
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISV-AVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++.|.....+|.|+|+.|-.+... +++..+||++.+.. .+-.+|+.++.. -.||||+++.+.+....+.++||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc-----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 567788888999999999999864 68889999986542 223456766554 46999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe-CCCCcEEEcccccceeec
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL-DEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~DfGla~~~~ 449 (619)
|.+.++-+.+.+..... .. ..+..|+.+++.|+.|||++ |+|||||||+|||+ ++.++++|+|||.++...
T Consensus 396 e~l~g~ell~ri~~~~~----~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPE----FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred hhccccHHHHHHHhcch----hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 99999988888876432 23 67778999999999999999 99999999999999 588999999999998765
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.+ ....+-|..|.|||++....|++++|+||||+++|+|+||+.||...... . +...++.
T Consensus 468 ~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~---ei~~~i~--------- 527 (612)
T KOG0603|consen 468 RS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----I---EIHTRIQ--------- 527 (612)
T ss_pred hh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----H---HHHHhhc---------
Confidence 44 22234588999999999999999999999999999999999999643321 1 1111111
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+.+....+....+|+.+|++.||.+||+|.++..
T Consensus 528 ----~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 528 ----MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ----CCccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 11222344567889999999999999999999874
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2.6e-31 Score=291.39 Aligned_cols=264 Identities=18% Similarity=0.217 Sum_probs=170.3
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-C----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeee------e
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-D----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF------C 360 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~------~ 360 (619)
..++|+..+.||+|+||.||+|.+. + +..||||++.... ..+.+..| .+....+.++..+... +
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~---~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG---AVEIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc---hhHHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 5678999999999999999999975 4 6899999876422 11212211 1122222333322221 2
Q ss_pred eCCCcceeEecccccchhhhhhcccCCC----------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 007073 361 TTPTERLLVYPFMQNLSVAYRLREIKPG----------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDV 424 (619)
Q Consensus 361 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 424 (619)
....+.++||||+.+++|.+++...... ...........++.|++.||+|||++ +|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence 4556789999999999999988653210 01112234567999999999999999 9999999
Q ss_pred CCCcEEeCC-CCcEEEcccccceeeccCCcceeeeccccccccccccccCC----------------------CCCcchh
Q 007073 425 KAANVLLDE-DFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG----------------------KSSERTD 481 (619)
Q Consensus 425 kp~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~D 481 (619)
||+|||++. ++.+||+|||+|+.+............+++.|+|||.+... .++.++|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999986 57999999999986654433344456789999999965322 2345679
Q ss_pred hHHHHHHHHHHHhCCCCCCCCccc-----cccchhHHHHHHHHhhhcccchhccccccCCC--CHHHHHHHHHHHHhccC
Q 007073 482 VFGYGIMLLELVTGQRAIDFSRLE-----EEDDVLLLDHVKKLEREKRLDAIVDRNLNKNY--NIQEVETMIQVALLCTQ 554 (619)
Q Consensus 482 v~S~Gv~l~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~l~~l~~~Cl~ 554 (619)
||||||++|||+++..+++..... ...+.....|....... ..+.+...+ .........+|+.+|++
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHcc
Confidence 999999999999977664321000 00000011111110000 000000000 00011234589999999
Q ss_pred CCCCCCCCHHHHHHH
Q 007073 555 ASPEDRPAMSEVVRM 569 (619)
Q Consensus 555 ~dP~~RPs~~evl~~ 569 (619)
.||++|||+.++++.
T Consensus 436 ~dP~kR~ta~e~L~H 450 (566)
T PLN03225 436 FKGRQRISAKAALAH 450 (566)
T ss_pred CCcccCCCHHHHhCC
Confidence 999999999999863
No 383
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-32 Score=274.27 Aligned_cols=246 Identities=23% Similarity=0.318 Sum_probs=196.3
Q ss_pred cCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccc
Q 007073 299 KNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
.++||+|.||+||-|+++ +|+.||||++.+.. ...+..++..|++++..++||.||.+.-.|+++++.++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 478999999999999964 79999999986543 3445678899999999999999999999999999999999999775
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEEcccccceeeccCCc
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED---FEAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGla~~~~~~~~ 453 (619)
=|...|... ...++....+-++.||..||.|||.+ +|+|+||||+|||+... .++||+|||+|+.++..
T Consensus 649 MLEMILSsE---kgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-- 720 (888)
T KOG4236|consen 649 MLEMILSSE---KGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-- 720 (888)
T ss_pred HHHHHHHhh---cccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh--
Confidence 555545432 23477777888999999999999999 99999999999999654 57999999999988643
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
.....++||+.|+|||++.+..|...-|+||.||++|--++|..||..... +.+.++.. ..+ .
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-------IndQIQNA-------aFM---y 783 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-------INDQIQNA-------AFM---Y 783 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-------hhHHhhcc-------ccc---c
Confidence 334567899999999999999999999999999999999999999963221 11111110 000 0
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
......+......+++...++..=.+|-|..+-+..
T Consensus 784 Pp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 784 PPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred CCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 122234555678899999999999999988776643
No 384
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=4.2e-31 Score=282.55 Aligned_cols=263 Identities=20% Similarity=0.208 Sum_probs=181.4
Q ss_pred HhcCCcccCccccCCCceEEEEEe-----------------CCCcEEEEEEeccCCCcchHH--------------HHHH
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-----------------ADGTKVAVKRLTDFESPGGDA--------------AFQR 340 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-----------------~~g~~vAvK~l~~~~~~~~~~--------------~~~~ 340 (619)
..++|++.++||+|+||+||+|.. .+++.||||++.... ....+ .+..
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~-~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDR-QGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccc-hhhHHHHHhhhhhhhcccchhHH
Confidence 567899999999999999999964 245789999986322 11222 3344
Q ss_pred HHHHHHHccCCCc-----cceeeeeeC--------CCcceeEecccccchhhhhhcccCC--------------------
Q 007073 341 EVEMISVAVHRNL-----LRLIGFCTT--------PTERLLVYPFMQNLSVAYRLREIKP-------------------- 387 (619)
Q Consensus 341 E~~~l~~l~H~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~-------------------- 387 (619)
|+.++.+++|.++ ++++++|.. ....++||||+++++|.++++....
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 7777777876654 677887753 3467999999999999999875321
Q ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeeccccccccc
Q 007073 388 GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIA 467 (619)
Q Consensus 388 ~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~a 467 (619)
....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..............+|+.|+|
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 012356778889999999999999999 99999999999999999999999999997654322222222335789999
Q ss_pred cccccCCCC----------------------CcchhhHHHHHHHHHHHhCCC-CCCCCcccc----ccchhHHHHHHHHh
Q 007073 468 PEYLSTGKS----------------------SERTDVFGYGIMLLELVTGQR-AIDFSRLEE----EDDVLLLDHVKKLE 520 (619)
Q Consensus 468 PE~~~~~~~----------------------~~~~Dv~S~Gv~l~elltg~~-p~~~~~~~~----~~~~~~~~~~~~~~ 520 (619)
||.+..... ..+.||||+||++++|++|.. |+.....-. ........|....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~- 457 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYK- 457 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhc-
Confidence 998754321 235799999999999999875 554211000 0001111111100
Q ss_pred hhcccchhccccccCCCCHHHHHHHHHHHHhccCCCC---CCCCCHHHHHH
Q 007073 521 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASP---EDRPAMSEVVR 568 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP---~~RPs~~evl~ 568 (619)
.. ...-...........+++.+++..+| .+|+|++|+++
T Consensus 458 -~~--------~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 458 -GQ--------KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred -cc--------CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 00 00001112234577889999998766 68999999985
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-32 Score=268.70 Aligned_cols=258 Identities=23% Similarity=0.345 Sum_probs=196.5
Q ss_pred HHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCC------cchHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES------PGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
...++|-+.++||+|||+.||+|.+ ...+.||||+-+-... ....+...+|.++-+.++||.||++++++.-+
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 3455677889999999999999994 4678899997642111 11234567899999999999999999999655
Q ss_pred -CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEE
Q 007073 364 -TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVV 439 (619)
Q Consensus 364 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl 439 (619)
+..+-|.||++|.+|+-+|...+ .++..+.+.|+.||+.||.||.+. +++|||-||||.|||+-. -|.+||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhk----lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHK----LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhh----hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEe
Confidence 56789999999999999998644 388899999999999999999997 678999999999999954 478999
Q ss_pred cccccceeeccCCc------ceeeeccccccccccccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc
Q 007073 440 GDFGLAKLVDVRKT------NVTTQVRGTMGHIAPEYLSTG----KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD 509 (619)
Q Consensus 440 ~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~ 509 (619)
+|||+++.++.+.. ..+....||.+|++||.+.-+ +++.|+||||.||++|..+.|+.||..... .
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs----Q 690 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS----Q 690 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh----H
Confidence 99999999864432 235567899999999988533 478999999999999999999999964321 0
Q ss_pred hhHHHHHHHHhhhcccchhccc-cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 007073 510 VLLLDHVKKLEREKRLDAIVDR-NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV 567 (619)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 567 (619)
..+. .+. .++.. .+.-...+....+..+++.+|++..-++|....++.
T Consensus 691 QdIL-------qeN---TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 691 QDIL-------QEN---TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred HHHH-------hhh---chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 1110 000 11110 011111233445778899999999999998766654
No 386
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.3e-32 Score=252.07 Aligned_cols=265 Identities=25% Similarity=0.353 Sum_probs=190.5
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEecc-CCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC--------C
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTD-FESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--------T 364 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~ 364 (619)
.|+...+||+|.||.||+|+.+ +|++||+|++-- ....+--....+|++++..++|+|++.+++.|.+. .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 4555678999999999999965 688899986532 22233335568999999999999999999988542 2
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||.+++. +|...+.+. ...++..+..+++.++..||.|+|.. .|+|||+||.|+||+.++.+||+|||+
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~---~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNR---KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCc---cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccc
Confidence 37899999987 777777653 23488999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcc---eeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH-HHHHH
Q 007073 445 AKLVDVRKTN---VTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD-HVKKL 519 (619)
Q Consensus 445 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~-~~~~~ 519 (619)
++.+...+.. ..+..+-|..|.+||.+.+ ..|+++.|||+-||++.||.||.+-+..... .....+.. .....
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte--qqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE--QQQLHLISQLCGSI 248 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH--HHHHHHHHHHhccC
Confidence 9877533322 1334456999999998876 5699999999999999999999887754321 11111111 11111
Q ss_pred hhhcccc-------hhc-ccccc-CCC--CHHH------HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 520 EREKRLD-------AIV-DRNLN-KNY--NIQE------VETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 520 ~~~~~~~-------~~~-~~~l~-~~~--~~~~------~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+-+.. ..+ -+.+. +.+ .++. ..+..+|+..++..||.+|+++.+++.
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 1110000 000 00000 000 0011 136678999999999999999999874
No 387
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=278.36 Aligned_cols=258 Identities=25% Similarity=0.317 Sum_probs=207.3
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeC--
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT-- 362 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~-- 362 (619)
+.+...++.|++.++||.|.+|.||+++. ++|+.+|+|++.... +.+++...|.++++.. .|||++.++|++..
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~--d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE--DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc--cccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 33444567889999999999999999995 578999999886443 3456777888898876 59999999999853
Q ss_pred ---CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEE
Q 007073 363 ---PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVV 439 (619)
Q Consensus 363 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 439 (619)
++..+||||||.+||..+++.... +..+.|.....|+..+++|+.+||.. .++|||||-.|||++.++.||+
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEE
Confidence 467899999999999999999877 55699999999999999999999999 9999999999999999999999
Q ss_pred cccccceeeccCCcceeeeccccccccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007073 440 GDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 440 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 514 (619)
.|||.+..+.... .......||+.|||||++.. ..|+..+|+||+|++..||--|.+|+......
T Consensus 165 vDFGvSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm--------- 234 (953)
T KOG0587|consen 165 VDFGVSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM--------- 234 (953)
T ss_pred eeeeeeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh---------
Confidence 9999998775433 23445679999999999954 34678999999999999999999997532211
Q ss_pred HHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 515 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+. .-.-.+...-..+.....++.+++..|+.+|-++||++.++++
T Consensus 235 --raLF-----~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 235 --RALF-----LIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred --hhhc-----cCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 0000 0001111111225677889999999999999999999999874
No 388
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.3e-31 Score=257.33 Aligned_cols=260 Identities=20% Similarity=0.231 Sum_probs=197.9
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccC--CC----ccceeeeeeCCC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVH--RN----LLRLIGFCTTPT 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H--~n----iv~l~~~~~~~~ 364 (619)
.+++|.+...+|+|.||.|-.+.+. .+..||||+++.. ....+..+-|++++.++.+ |+ +|.+.+++.-.+
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 3678999999999999999999964 4789999998743 2334566789999999843 22 678888899999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC------------
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD------------ 432 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~------------ 432 (619)
+.++|+|.+ |.|+.+++.+. +-.+++...+..|+.|++++++|||+. +++|-||||+|||+.
T Consensus 165 hiCivfell-G~S~~dFlk~N--~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLKEN--NYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred ceEEEEecc-ChhHHHHhccC--CccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCC
Confidence 999999987 45899999763 234588899999999999999999999 999999999999983
Q ss_pred --------CCCcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcc
Q 007073 433 --------EDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRL 504 (619)
Q Consensus 433 --------~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~ 504 (619)
.+..++|+|||.|+.-.... ...+.|..|.|||++.+-.++.++||||+||||+|+.||...|..-..
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 13468999999998654332 455679999999999999999999999999999999999998865331
Q ss_pred ccccchhHHHHHHHHhhh-----------------ccc-----------chhcccccc----CCCCHHHHHHHHHHHHhc
Q 007073 505 EEEDDVLLLDHVKKLERE-----------------KRL-----------DAIVDRNLN----KNYNIQEVETMIQVALLC 552 (619)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~-----------------~~~-----------~~~~~~~l~----~~~~~~~~~~l~~l~~~C 552 (619)
. ..+ ..+.++..+ +++ ..+.+.... -.....+...+++|+..|
T Consensus 315 ~----EHL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~m 389 (415)
T KOG0671|consen 315 L----EHL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRM 389 (415)
T ss_pred H----HHH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHH
Confidence 1 111 111111110 000 000110000 011245557899999999
Q ss_pred cCCCCCCCCCHHHHHH
Q 007073 553 TQASPEDRPAMSEVVR 568 (619)
Q Consensus 553 l~~dP~~RPs~~evl~ 568 (619)
+..||.+|+|+.|+++
T Consensus 390 L~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 390 LEFDPARRITLREALS 405 (415)
T ss_pred HccCccccccHHHHhc
Confidence 9999999999999985
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-31 Score=281.87 Aligned_cols=246 Identities=27% Similarity=0.347 Sum_probs=186.2
Q ss_pred CcccCccccCCCc-eEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeEeccc
Q 007073 296 FSEKNVLGQGGFG-KVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 296 ~~~~~~lg~G~fg-~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
|...+++|.|+.| .||+|.+ +|+.||||++-. +...-..+|+..++.-+ |||||++++.-.++...|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE----EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhh----HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 5556789999998 6899999 589999999853 22345578999998774 999999998888888899999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-----CCcEEEcccccceee
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-----DFEAVVGDFGLAKLV 448 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfGla~~~ 448 (619)
.- +|.+++...........-.....+..|++.|+++||+. +||||||||.||||+. ...++|+|||+++.+
T Consensus 586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 64 99999876311111111134567889999999999998 9999999999999975 257899999999998
Q ss_pred ccCCcce--eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 449 DVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG-QRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 449 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
....... .....||-+|+|||.+....-+.++||||+||++|+.+|| ++||..... .+ ..-+.....+
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~---R~------~NIl~~~~~L 732 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE---RQ------ANILTGNYTL 732 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH---hh------hhhhcCccce
Confidence 7655443 3356799999999999998889999999999999999996 899963211 00 0001111111
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. +. ...++ +..+|+.+|++.+|..||++.+|+.
T Consensus 733 ~~-----L~--~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 733 VH-----LE--PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ee-----ec--cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 10 00 01111 6789999999999999999999983
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-30 Score=248.54 Aligned_cols=253 Identities=21% Similarity=0.273 Sum_probs=196.5
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC--CCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCc
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF--ESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 365 (619)
.....+|....+||+|+|+.|..++++ +.+.+|+|++++. .......=.+.|-.+..+. +||.+|-+..++.++.+
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr 325 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR 325 (593)
T ss_pred ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence 345678999999999999999999965 5788999998753 2222233344666676654 69999999999999999
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++|.||++||+|--+++.. ..++....+-+...|.-||.|||++ |||.||+|.+|||+|..|++|++|+|++
T Consensus 326 lffvieyv~ggdlmfhmqrq----rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmc 398 (593)
T KOG0695|consen 326 LFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMC 398 (593)
T ss_pred EEEEEEEecCcceeeehhhh----hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchh
Confidence 99999999999998777653 3388888888999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
+.- ..+...++.++||+.|+|||++.+..|...+|.|++||+++||+.|+.||+.-.+...+ ...-+......
T Consensus 399 ke~-l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d-~ntedylfqvi----- 471 (593)
T KOG0695|consen 399 KEG-LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPD-MNTEDYLFQVI----- 471 (593)
T ss_pred hcC-CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcc-cchhHHHHHHH-----
Confidence 853 33445567789999999999999999999999999999999999999999865443221 11112222221
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP 561 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 561 (619)
+.+.++. +...+.....+++.-+++||++|-
T Consensus 472 ---lekqiri--prslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 472 ---LEKQIRI--PRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ---hhhcccc--cceeehhhHHHHHHhhcCCcHHhc
Confidence 1111111 222223455677888999999984
No 391
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.2e-31 Score=263.85 Aligned_cols=244 Identities=21% Similarity=0.230 Sum_probs=197.3
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCc-EEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~-~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
..++.....||-|+||.|=.+..+... .+|+|.+++.. ...+.+....|-.+|...+.|.||++|-.+.+....|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 344555678999999999999875433 48999887543 344567788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
||-|-||.+-..|++... ++..+..-++.-+.+|++|||++ +||.|||||+|.++|.+|-+||.|||+|+.+.
T Consensus 499 mEaClGGElWTiLrdRg~----Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGS----FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred HHhhcCchhhhhhhhcCC----cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 999999999999987433 77888888999999999999999 99999999999999999999999999999876
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.. ..+-.++||+.|.|||++.+..++.++|.||+|+++|||+||.+||.....-.. +..+...-..
T Consensus 572 ~g--~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt--------Yn~ILkGid~---- 637 (732)
T KOG0614|consen 572 SG--RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT--------YNLILKGIDK---- 637 (732)
T ss_pred cC--CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH--------HHHHHhhhhh----
Confidence 44 345567899999999999999999999999999999999999999975432111 1111111011
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCC
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPA 562 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs 562 (619)
-.++........+++++.+..+|.+|-.
T Consensus 638 -----i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 -----IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred -----hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 1122333356778999999999999975
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-30 Score=241.77 Aligned_cols=266 Identities=23% Similarity=0.312 Sum_probs=196.1
Q ss_pred cccCccccCCCceEEEEEe-CCCcEEEEEEeccC-CCcchHHHHHHHHHHHHHccCCCccceeeeeeCC-----CcceeE
Q 007073 297 SEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDF-ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TERLLV 369 (619)
Q Consensus 297 ~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lv 369 (619)
+..+.||.|+||.||...+ ++|+.||.|++... ..-...+.+.+|++++..++|.|++..+++..-+ ++.+++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 3457899999999999996 58999999988643 2334567888999999999999999998877554 356778
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
.|.|.. +|...+- +...++-+..+-+..||.+||.|||+. +|.||||||.|.|++.+-.+||+|||+|+..+
T Consensus 136 TELmQS-DLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 136 TELMQS-DLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHh-hhhheec----cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 888764 5554443 344578888888999999999999999 99999999999999999999999999999887
Q ss_pred cCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH-------HHHhh
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV-------KKLER 521 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~-------~~~~~ 521 (619)
.++....+..+-|..|.|||++++. .|+.+.||||.||+..|++..+..|.....-..-+. +.+.. .+..-
T Consensus 208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~l-ItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQM-IIDLLGTPSQEAMKYAC 286 (449)
T ss_pred hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHH-HHHHhCCCcHHHHHHHh
Confidence 7776667777788999999999875 589999999999999999998888765433211110 00000 00001
Q ss_pred hcccchhccccccC-C--------CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 522 EKRLDAIVDRNLNK-N--------YNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 522 ~~~~~~~~~~~l~~-~--------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
++--..++...... + .....-.+-.++...++..||+.|.+.++.+..+-
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 11111122221111 1 01233345677888899999999999988876543
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=6.3e-28 Score=231.84 Aligned_cols=211 Identities=34% Similarity=0.507 Sum_probs=183.0
Q ss_pred cccCCCceEEEEEeCC-CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchhhh
Q 007073 302 LGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAY 380 (619)
Q Consensus 302 lg~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 380 (619)
||+|++|.||++...+ |+.+++|++.........+.+.+|++.++.+.|++++++++++......++++||+++++|..
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999864 899999998754322235789999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-CCcEEEcccccceeeccCCcceeeec
Q 007073 381 RLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-DFEAVVGDFGLAKLVDVRKTNVTTQV 459 (619)
Q Consensus 381 ~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~~~ 459 (619)
++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+........ .....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~ 153 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTI 153 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcc
Confidence 987642 3478899999999999999999999 9999999999999999 89999999999986644321 12234
Q ss_pred cccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCC
Q 007073 460 RGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYN 538 (619)
Q Consensus 460 ~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 538 (619)
.+...|++||..... .++.+.|+|++|+++++|
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------- 187 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------- 187 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence 578899999999887 789999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 539 IQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 539 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
..+.+++..|++.+|++||++.++++.
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 257889999999999999999999864
No 394
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=6.4e-29 Score=254.92 Aligned_cols=204 Identities=22% Similarity=0.273 Sum_probs=171.3
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
.-|..++.||-|+||.|.++... +...||+|.+++.. ..........|..||+..+.+=||+|+-.|.+.+..|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 34667788999999999999854 45679999987532 2334566778999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec-
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD- 449 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~- 449 (619)
+|++||++-.+|-.. ..+++...+-++..++.|+++.|.. |+|||||||+|||||.+|++||+|||+++-+.
T Consensus 709 dYIPGGDmMSLLIrm----gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRM----GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred eccCCccHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecccccccee
Confidence 999999999888753 3478888888899999999999999 99999999999999999999999999986441
Q ss_pred --------cCC-----cc---------------------------eeeeccccccccccccccCCCCCcchhhHHHHHHH
Q 007073 450 --------VRK-----TN---------------------------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIML 489 (619)
Q Consensus 450 --------~~~-----~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l 489 (619)
..+ +. .....+||+.|+|||++....|+..+|+||.||||
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 000 00 00123699999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCcc
Q 007073 490 LELVTGQRAIDFSRL 504 (619)
Q Consensus 490 ~elltg~~p~~~~~~ 504 (619)
|||+.|+.||.....
T Consensus 862 ~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTP 876 (1034)
T ss_pred HHHhhCCCCccCCCC
Confidence 999999999976544
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=6.5e-29 Score=226.27 Aligned_cols=261 Identities=19% Similarity=0.300 Sum_probs=194.4
Q ss_pred HhcCCcccCccccCCCceEEEEE-eCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCC--cce
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPT--ERL 367 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~~ 367 (619)
..++|++.+.+|+|.++.||.|. ..+.++++||.++. ...+...+|+.++..+. ||||++++++..++. ...
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 34678889999999999999999 45788999999974 44678899999999997 999999999997764 567
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEcccccce
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLAK 446 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla~ 446 (619)
+|+||+.+.+....... ++......++.++..||.|+|+. ||.|||+||.|++||.. ..++|+|||+|.
T Consensus 112 LiFE~v~n~Dfk~ly~t-------l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYPT-------LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred hHhhhhccccHHHHhhh-------hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHh
Confidence 99999998776655443 66667788999999999999999 99999999999999965 579999999999
Q ss_pred eeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH--------
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK-------- 517 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-------- 517 (619)
+..+..... -.+.+.-|.-||.+-. ..|+..-|+|||||++..|+..+.||-......+.-+.+.....
T Consensus 182 FYHp~~eYn--VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 182 FYHPGKEYN--VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred hcCCCceee--eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 876554332 2234667888998865 45788999999999999999999999655433222222211111
Q ss_pred -HH--hhhcccchhccccccCC---C----CH-HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 518 -KL--EREKRLDAIVDRNLNKN---Y----NI-QEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 518 -~~--~~~~~~~~~~~~~l~~~---~----~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+. ........++.+..+.. + +. -..++..+++...+..|..+|||++|...
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 10 11111222222211110 0 11 11257789999999999999999999874
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=9.7e-29 Score=251.81 Aligned_cols=196 Identities=22% Similarity=0.333 Sum_probs=167.2
Q ss_pred CCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-------cchHHHHHHHHHHHHHcc---CCCccceeeeeeCC
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-------PGGDAAFQREVEMISVAV---HRNLLRLIGFCTTP 363 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 363 (619)
+|...+.+|+|+||.|+.|.++ +...|+||.+.+..- ....-..-.|+++|+.++ |+||++++++++++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 5788899999999999999986 467799998864221 111123446999999998 99999999999999
Q ss_pred CcceeEeccc-ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 364 TERLLVYPFM-QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 364 ~~~~lv~e~~-~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
+.+++++|-. ++.+|.+++.... .+++.+...|+.||+.|+++||+. +|||||||-+||.++.+|-+||+||
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~kp----~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFKP----RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhccC----ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeec
Confidence 9999999875 4568888887643 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCC
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAID 500 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~ 500 (619)
|.|.+.. ......++||..|.|||++.+.+| ...-|||++|+++|-++....||.
T Consensus 715 gsaa~~k---sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTK---SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhc---CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9998654 344566789999999999999887 667899999999999999888874
No 397
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=2.9e-27 Score=230.49 Aligned_cols=200 Identities=30% Similarity=0.422 Sum_probs=172.2
Q ss_pred CcccCccccCCCceEEEEEeCC-CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQ 374 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 374 (619)
|...+.||+|++|.||++...+ ++.+|+|.+.........+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567889999999999999865 899999998754322256788899999999999999999999999899999999999
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
+++|.+++...... +++.....++.++++++.+||+. +++|+|++|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~L~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 81 GGDLFDYLRKKGGK---LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCCHHHHHHhcccC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 99999998764321 78889999999999999999999 9999999999999999999999999999877544311
Q ss_pred eeeeccccccccccccc-cCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 007073 455 VTTQVRGTMGHIAPEYL-STGKSSERTDVFGYGIMLLELVTGQRAIDF 501 (619)
Q Consensus 455 ~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~ 501 (619)
......++..|++||.+ ....++.++|||+||++++||++|+.||+.
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 22334578899999998 667788899999999999999999999953
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.4e-27 Score=235.84 Aligned_cols=133 Identities=22% Similarity=0.322 Sum_probs=109.9
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-----C---CCccceeeeeeC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-----H---RNLLRLIGFCTT 362 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~~~~~~ 362 (619)
...+|.+.++||-|.|++||++.+. +.+.||+|+.+.. ..-.+..+.|+++|++++ | ..||+|+++|..
T Consensus 76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA--QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh--hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 3468889999999999999999964 5678999998642 334566788999999885 3 359999999854
Q ss_pred ----CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe
Q 007073 363 ----PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL 431 (619)
Q Consensus 363 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 431 (619)
+.+.++|+|++ |.+|..++....-.+ ++...+++|+.||+.||.|||++| +|||-||||+|||+
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~YrG--lpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYRG--LPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 45789999998 457878876543333 888999999999999999999998 99999999999998
No 399
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=6.1e-28 Score=230.69 Aligned_cols=257 Identities=22% Similarity=0.264 Sum_probs=191.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC-CCcchHHHHHHHHHHHHHccCCCccceeeeeeCC------C
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF-ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------T 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 364 (619)
..+|.....+|.|.- .|..+.+. .+++||+|++... ......+...+|...+..+.|+||++++.++.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 345666778888888 56666543 5899999987532 2334456778999999999999999999988533 4
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
+.++|||+|.. +|...+.. .++-.+...|..|+..|++|||+. +|+||||||+||++..+..+||.|||+
T Consensus 95 e~y~v~e~m~~-nl~~vi~~------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVILM------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred hHHHHHHhhhh-HHHHHHHH------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence 57999999964 77777762 167778899999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
|+..... ...+.++.|..|.|||++.+..+.+.+||||.||++.||++|+.-|.+.. .+-+|.+.....+.
T Consensus 165 ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d-------~idQ~~ki~~~lgt 235 (369)
T KOG0665|consen 165 ARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD-------HIDQWNKIIEQLGT 235 (369)
T ss_pred hcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch-------HHHHHHHHHHHhcC
Confidence 9854332 35667788999999999998889999999999999999999998886321 11222221111111
Q ss_pred cc---------------------------hh-ccccccC--CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 525 LD---------------------------AI-VDRNLNK--NYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 525 ~~---------------------------~~-~~~~l~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.. +. .|..... ..+.-......+++.+|+..+|++|.+.+++++.
T Consensus 236 pd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 236 PDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred CCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00 00 0100000 0112233467789999999999999999999853
No 400
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=9.2e-27 Score=217.39 Aligned_cols=254 Identities=20% Similarity=0.301 Sum_probs=185.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeee-eeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGF-CTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~-~~~~~~~~lv 369 (619)
.+.|.+.+.+|+|.||.+-.++++ ..+.+++|-++... ...++|.+|...--.+ .|.||+.-+++ +++.+.++.+
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~--tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ--TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch--hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 456888899999999999999986 56789999887543 3468899999874444 58999988765 5666778899
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC--CCCcEEEccccccee
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD--EDFEAVVGDFGLAKL 447 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~DfGla~~ 447 (619)
+||.+.|+|...+.... +-+....+++.|++.|+.|+|++ .+||||||.+||||- +...+||+|||+.+.
T Consensus 101 qE~aP~gdL~snv~~~G-----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAG-----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred eccCccchhhhhcCccc-----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccc
Confidence 99999999998876522 66677889999999999999999 999999999999993 335899999999875
Q ss_pred eccCCcceeeeccccccccccccccCC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTG-----KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
.+.. .....-+..|.+||..... ...+.+|||.||+++|.++||+.||...... +...+.|.....+
T Consensus 173 ~g~t----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~---d~~Y~~~~~w~~r- 244 (378)
T KOG1345|consen 173 VGTT----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM---DKPYWEWEQWLKR- 244 (378)
T ss_pred cCce----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc---CchHHHHHHHhcc-
Confidence 4321 1222346689999977432 3478899999999999999999999743332 2223333333221
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
....+ ...+. ...+.+.++.++-+..+|++|=...++.++-.
T Consensus 245 --k~~~~----P~~F~-~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 245 --KNPAL----PKKFN-PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred --cCccC----chhhc-ccCHHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 11111 11111 12346677888899999999955555544433
No 401
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=1.2e-26 Score=230.01 Aligned_cols=267 Identities=21% Similarity=0.313 Sum_probs=198.4
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeC----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCC
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTP 363 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~ 363 (619)
+....+.|...++||+|.|++||++... ..+.||+|.+.....+ .....|++++..+. +.||+++.+++...
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 4456677889999999999999999953 4678999998765443 45789999999885 89999999999999
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEccc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDF 442 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Df 442 (619)
+...+|+||++.....++... ++......++..+..||+++|.+ |||||||||+|+|.+.. +.-.|.||
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDF 177 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDF 177 (418)
T ss_pred CeeEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEec
Confidence 999999999999888888876 67888999999999999999999 99999999999999854 56789999
Q ss_pred ccceeeccCC-------------------------------------------cceeeeccccccccccccccCC-CCCc
Q 007073 443 GLAKLVDVRK-------------------------------------------TNVTTQVRGTMGHIAPEYLSTG-KSSE 478 (619)
Q Consensus 443 Gla~~~~~~~-------------------------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ 478 (619)
|+|...+... ........||+||.|||++... ..++
T Consensus 178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt 257 (418)
T KOG1167|consen 178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT 257 (418)
T ss_pred hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence 9997221000 0001123599999999998764 5699
Q ss_pred chhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH------HHhhhcc--cch---------h------cc-ccc-
Q 007073 479 RTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK------KLEREKR--LDA---------I------VD-RNL- 533 (619)
Q Consensus 479 ~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~--~~~---------~------~~-~~l- 533 (619)
++||||-||+++-+++++.||-.+..+...-..+..... .....+. +.+ . ++ ...
T Consensus 258 aiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~ 337 (418)
T KOG1167|consen 258 AIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIY 337 (418)
T ss_pred ccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcc
Confidence 999999999999999999999655443332222211110 0111111 000 0 00 000
Q ss_pred --------cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 534 --------NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 534 --------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........+..+++++.+|+..||.+|.|+++.+.
T Consensus 338 ~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 338 KSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred cccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 00111233347899999999999999999999884
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-27 Score=247.10 Aligned_cols=253 Identities=22% Similarity=0.281 Sum_probs=197.1
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|+....+|+|.+|.|||++. ..++..|||+++- ...+.....++|+-+++..+|||||.++|.+-..+..++.||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkL-ep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKL-EPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeec-cCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 45788889999999999999996 4789999999863 223445667889999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+.+|+|.+.-+-.. +++..+...+++...+|++|||+. +=+|||||-.||++++.+.+|++|||.+..+...
T Consensus 93 ycgggslQdiy~~Tg----plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred ecCCCcccceeeecc----cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhh
Confidence 999999998777543 488888899999999999999999 8899999999999999999999999998755322
Q ss_pred Ccceeeeccccccccccccc---cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 452 KTNVTTQVRGTMGHIAPEYL---STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
......+.||+.|||||+. ..+.|..++|||+.|+...|+---..|.-.-. -.+.. .+-.. ..
T Consensus 166 -i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh--------pmr~l-~LmTk----S~ 231 (829)
T KOG0576|consen 166 -IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH--------PMRAL-FLMTK----SG 231 (829)
T ss_pred -hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc--------hHHHH-HHhhc----cC
Confidence 2233456799999999976 46779999999999999999876555531100 00000 00000 01
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.++...+ -.....+.+.++++.|+.++|++||+++.++.
T Consensus 232 ~qpp~lk-Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 232 FQPPTLK-DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCCccc-CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1111111 12344578899999999999999999987764
No 403
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6.1e-27 Score=218.40 Aligned_cols=247 Identities=23% Similarity=0.314 Sum_probs=191.9
Q ss_pred cCccccCCCceEEEEEeCCCcEEEEEEecc-CCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccch
Q 007073 299 KNVLGQGGFGKVYRGVLADGTKVAVKRLTD-FESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLS 377 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 377 (619)
..+|.+...|..|+|+|. |..+++|++.- ..+....++|..|.-.++-+.||||++++|.|..+....++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 346889999999999996 56666777652 2334456789999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceee
Q 007073 378 VAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT 457 (619)
Q Consensus 378 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 457 (619)
|...+++. .....+..+..+++.++|+|++|||+.. |-|.---+.+..|++|++.+++|+- +-+++- ....
T Consensus 274 lynvlhe~--t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~kfs-----fqe~ 344 (448)
T KOG0195|consen 274 LYNVLHEQ--TSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTKFS-----FQEV 344 (448)
T ss_pred HHHHHhcC--ccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-ccceee-----eecc
Confidence 99999974 3456788889999999999999999973 2343446889999999999988752 111110 0001
Q ss_pred eccccccccccccccCCCC---CcchhhHHHHHHHHHHHhCCCCCCCCcc-ccccchhHHHHHHHHhhhcccchhccccc
Q 007073 458 QVRGTMGHIAPEYLSTGKS---SERTDVFGYGIMLLELVTGQRAIDFSRL-EEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 458 ~~~gt~~y~aPE~~~~~~~---~~~~Dv~S~Gv~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
...-.+.||+||.++..+. -.++|+|||++++||+.|...||..-+. +-. ..+--..+
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg------------------mkialegl 406 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG------------------MKIALEGL 406 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh------------------hhhhhccc
Confidence 1123678999999987764 4579999999999999999999975322 111 11222334
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+...++..+..+.+++.-|++.||.+||.+..|+-.||++
T Consensus 407 rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 407 RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 5556777788999999999999999999999999999875
No 404
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=2.2e-26 Score=231.85 Aligned_cols=209 Identities=22% Similarity=0.226 Sum_probs=173.8
Q ss_pred cCHHHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc------CCCccce
Q 007073 284 YSWRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV------HRNLLRL 356 (619)
Q Consensus 284 ~~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l 356 (619)
|.+.-.+....+|.+....|+|-|++|.+|... -|..||||++.... ...+.=+.|+++|+++. --+.+++
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE--~M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE--VMHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch--HHhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 344455667788999999999999999999964 47899999997543 23445578999999986 3578999
Q ss_pred eeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-C
Q 007073 357 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-F 435 (619)
Q Consensus 357 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~ 435 (619)
+..|...++.|+|||-+. .+|.+.|..+.. ..-+....+..++.|+.-||..|... +|+|.||||+|||+++. .
T Consensus 500 ~r~F~hknHLClVFE~Ls-lNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 500 FRHFKHKNHLCLVFEPLS-LNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKN 574 (752)
T ss_pred HHHhhhcceeEEEehhhh-chHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcc
Confidence 999999999999999775 488888887654 33478888999999999999999987 99999999999999976 5
Q ss_pred cEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 436 EAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
.+||||||.|........ +.+.-+..|.|||++.+.+|+...|+||.||.|||+.||+..|+..
T Consensus 575 iLKLCDfGSA~~~~enei---tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 575 ILKLCDFGSASFASENEI---TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred eeeeccCccccccccccc---cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 679999999987654332 2334466899999999999999999999999999999999998754
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=3.7e-26 Score=263.16 Aligned_cols=194 Identities=14% Similarity=0.157 Sum_probs=137.5
Q ss_pred ccC-CCccceeeeee-------CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 007073 348 AVH-RNLLRLIGFCT-------TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 419 (619)
Q Consensus 348 l~H-~niv~l~~~~~-------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 419 (619)
++| +||+++++++. .....+.++||+ +++|.+++... ...++..+++.++.||++||+|||++ +|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP---DRSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 445 57888888772 223466778877 55999999742 24489999999999999999999999 99
Q ss_pred EecCCCCCcEEeCC-------------------CCcEEEcccccceeeccCCc---------------ceeeeccccccc
Q 007073 420 IHRDVKAANVLLDE-------------------DFEAVVGDFGLAKLVDVRKT---------------NVTTQVRGTMGH 465 (619)
Q Consensus 420 vH~Dlkp~NIll~~-------------------~~~~kl~DfGla~~~~~~~~---------------~~~~~~~gt~~y 465 (619)
+||||||+|||++. ++.+|++|||+++....... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 45566777777654311000 001123578899
Q ss_pred cccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHH
Q 007073 466 IAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETM 545 (619)
Q Consensus 466 ~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 545 (619)
||||++.+..++.++|||||||++|||++|..|+.... ......... ...+. ........
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~------~~~~~~~~~---------~~~~~-----~~~~~~~~ 241 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS------RTMSSLRHR---------VLPPQ-----ILLNWPKE 241 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH------HHHHHHHHh---------hcChh-----hhhcCHHH
Confidence 99999999999999999999999999999888754210 000000000 01110 01112345
Q ss_pred HHHHHhccCCCCCCCCCHHHHHH
Q 007073 546 IQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 546 ~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+++.+||+.+|.+||++.|+++
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhh
Confidence 68889999999999999999975
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=9.7e-25 Score=204.81 Aligned_cols=166 Identities=20% Similarity=0.190 Sum_probs=124.0
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 455 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 455 (619)
|+|.++++.. +..+++..+..++.|++.||+|||++ + ||+||+++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 6788888753 23489999999999999999999998 5 999999999999999 99998764322
Q ss_pred eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC
Q 007073 456 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 535 (619)
Q Consensus 456 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 535 (619)
..||+.|||||++.+..++.++|||||||++|||+||+.||...... .............. ...+ .
T Consensus 64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~---~~~~~~~~~~~~~~----~~~~----~ 129 (176)
T smart00750 64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL---SAILEILLNGMPAD----DPRD----R 129 (176)
T ss_pred ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh---cHHHHHHHHHhccC----Cccc----c
Confidence 25899999999999999999999999999999999999998542211 11111111111000 0000 0
Q ss_pred CCCHHHHH--HHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 536 NYNIQEVE--TMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 536 ~~~~~~~~--~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
........ .+.+++.+||+.+|++||++.++++.+..
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 01112222 68999999999999999999999987755
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=3.7e-23 Score=213.05 Aligned_cols=257 Identities=20% Similarity=0.236 Sum_probs=190.3
Q ss_pred CCcccCccccCCCceEEEEEeCCC--cEEEEEEeccCCCcchHHHHHHHHHHHHHccC----CCccceeeee-eCCCcce
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLADG--TKVAVKRLTDFESPGGDAAFQREVEMISVAVH----RNLLRLIGFC-TTPTERL 367 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~~g--~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~-~~~~~~~ 367 (619)
+|.+.+.||+|+||.||.+...+. ..+|+|........... .+..|..++..+.. +++..+++.. ..+...+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 799999999999999999997543 47888877543322222 67788998888863 6888888888 4667789
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-----CcEEEccc
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-----FEAVVGDF 442 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~Df 442 (619)
+||+.+ |.+|.+...... ...++..+...|+.|+..+|+++|+. |++||||||.|+++... ..+.|.||
T Consensus 98 iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 998866 668888776544 45699999999999999999999999 99999999999999865 46999999
Q ss_pred ccce--eeccCCc------ce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH
Q 007073 443 GLAK--LVDVRKT------NV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 443 Gla~--~~~~~~~------~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 513 (619)
|+++ ....... .. .....||..|+++....+.+.+.+.|+||++.++.|++.|..||........ .
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-----~ 246 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-----K 246 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-----H
Confidence 9998 3321111 11 2345699999999999999999999999999999999999999964332211 1
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
..+........... .....+..+.++...+-..+..++|....+...++.
T Consensus 247 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~ 296 (322)
T KOG1164|consen 247 SKFEKDPRKLLTDR---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKD 296 (322)
T ss_pred HHHHHHhhhhcccc---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence 11111111111100 111122455566666666899999999999988766
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=1.3e-23 Score=215.75 Aligned_cols=167 Identities=26% Similarity=0.275 Sum_probs=130.0
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC--CCcEEEEEEeccCC----CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA--DGTKVAVKRLTDFE----SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 364 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~--~g~~vAvK~l~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 364 (619)
...++|.+.+.||+|+||+||+|.+. +++.||||++.... .......|.+|++++++++|+|+++.+..+ .
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C
Confidence 45678999999999999999999864 57888999875321 122356789999999999999998633222 4
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCcEEeCCCCcEEEcccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDV-KAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~DfG 443 (619)
..++||||+++++|... . ... ...++.++++||.|||++ +|+|||| ||+|||++.++.+||+|||
T Consensus 92 ~~~LVmE~~~G~~L~~~-~---~~~-------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-R---PHG-------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CcEEEEEccCCCCHHHh-C---ccc-------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 57999999999999632 1 100 146788999999999999 9999999 9999999999999999999
Q ss_pred cceeeccCCccee-------eeccccccccccccccCC
Q 007073 444 LAKLVDVRKTNVT-------TQVRGTMGHIAPEYLSTG 474 (619)
Q Consensus 444 la~~~~~~~~~~~-------~~~~gt~~y~aPE~~~~~ 474 (619)
+|+.+........ ....+++.|+|||++...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9997754321111 245678899999998643
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=4.7e-23 Score=189.59 Aligned_cols=261 Identities=18% Similarity=0.227 Sum_probs=200.2
Q ss_pred HhcCCcccCccccCCCceEEEEE-eCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccC-CCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVH-RNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lv 369 (619)
...+|.+++.||+|+||.+|.|. ..+|..||||.-.. .....++..|.+++..++| ..|..+..+..+.....+|
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~---~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS---KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecc---cCCCcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 45679999999999999999999 46899999997643 2335677889999999985 7788888888888899999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEEcccccce
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED---FEAVVGDFGLAK 446 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGla~ 446 (619)
|+.+ |.+|.+.+..... .++..+.+-++-|+..-++|+|.+ +++||||||+|+|..-+ ..+.++|||+|+
T Consensus 90 MdLL-GPsLEdLfnfC~R---~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFCSR---RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eecc-CccHHHHHHHHhh---hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchh
Confidence 9987 6688888876433 378889999999999999999999 99999999999998643 568999999999
Q ss_pred eeccCCcc------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh
Q 007073 447 LVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 447 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
.+.+..+. ......||.+|.+--...+.+.+.+.|+-|+|.++.+.--|..||..-...... +.+..+.
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~-----QKyEkI~ 237 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKK-----QKYEKIS 237 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHH-----HHHHHHH
Confidence 87543322 223456999999999888888899999999999999999999999764432211 1111111
Q ss_pred hhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 521 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+..+...+ .......+.++.-.+.-|-..--++-|...-+-+.++.+
T Consensus 238 -EkK~s~~i-----e~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 238 -EKKMSTPI-----EVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred -HhhcCCCH-----HHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 11111111 112334456778888899999999999988877776654
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=6.2e-21 Score=196.20 Aligned_cols=262 Identities=26% Similarity=0.330 Sum_probs=197.4
Q ss_pred CcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcc--hHHHHHHHHHHHHHccCC-CccceeeeeeCCCcceeEecc
Q 007073 296 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHR-NLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~e~ 372 (619)
|...+.||.|+||.||++... ..+++|.+....... ....+.+|+.+++.+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999986 889999987654443 477899999999999988 799999999777778999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEcccccceeeccC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-EAVVGDFGLAKLVDVR 451 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~~~ 451 (619)
+.++++.+.+...... ..+.......++.|++.++.|+|+. +++|||+||+||+++... .++++|||.++.....
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999666543211 3578889999999999999999999 999999999999999988 7999999999866443
Q ss_pred Ccc-----eeeeccccccccccccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 452 KTN-----VTTQVRGTMGHIAPEYLST---GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 452 ~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
... ......|+..|+|||.+.+ ..++...|+||+|++++++++|..|+...... ................
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~- 233 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-SATSQTLKIILELPTP- 233 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-ccHHHHHHHHHhcCCc-
Confidence 322 2355679999999999987 57899999999999999999999996543321 0001111111111100
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 524 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.................+.+++..|+..+|..|.+..+....
T Consensus 234 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 ----SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ----ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000001223567889999999999999998887653
No 411
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=6.5e-21 Score=183.31 Aligned_cols=258 Identities=18% Similarity=0.216 Sum_probs=195.3
Q ss_pred cCCcccCccccCCCceEEEEE-eCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 371 (619)
-.|.++++||+|.||..+.|+ +-++.+||||.-.. .....++..|.+.++.+. .++|...+-+..++.+..+|+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr---kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR---KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccc---cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 468899999999999999999 45799999996532 223567788999999886 6899998888888888999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-----CCcEEEcccccce
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-----DFEAVVGDFGLAK 446 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfGla~ 446 (619)
.+ |.||.++..-+. ..++..++..+|.|+..-++|+|++ ..|.|||||+|+||.. ...+.++|||+|+
T Consensus 105 LL-GPSLEDLFD~Cg---R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCG---RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hh-CcCHHHHHHHhc---CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 87 568888776543 3489999999999999999999999 9999999999999964 3468999999999
Q ss_pred eeccCCcce------eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh
Q 007073 447 LVDVRKTNV------TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 447 ~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
.+.+.++.. .....||.+||+-....+.+-+.+.|.-|+|-+.++.+-|..||..-..+... +.+.++.
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK-----~kYeKIG 252 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK-----EKYEKIG 252 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH-----HHHHHhc
Confidence 875544332 23456999999999999999999999999999999999999999875543321 1122221
Q ss_pred hhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 521 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
..++...+- ......+.++...+.-.-..+-.+-|..+-+...+.+
T Consensus 253 e~Kr~T~i~------~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~d 298 (449)
T KOG1165|consen 253 ETKRSTPIE------VLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDD 298 (449)
T ss_pred cccccCCHH------HHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 111111000 0122334456666666667788888887766655544
No 412
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=3.2e-22 Score=218.99 Aligned_cols=254 Identities=18% Similarity=0.209 Sum_probs=185.7
Q ss_pred cccCccccCCCceEEEEEeC-CCcEEEEEEec----cCCCcc-hHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 297 SEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLT----DFESPG-GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 297 ~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~----~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
...+++|.|++|.|+..... .....+.|..+ ...... ....+..|+-+-..+.|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34678999999988877743 34444444332 111111 1122555676777889999988887777766666669
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++ +|...+... ..+....+..++.|+..|++|+|+. ||.|||+|++|++++.++.+||+|||.+.....
T Consensus 401 E~~~~-Dlf~~~~~~----~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN----GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hcccH-HHHHHHhcc----cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeecc
Confidence 99999 999888763 2377778888999999999999999 999999999999999999999999999987754
Q ss_pred CCc---ceeeeccccccccccccccCCCCCc-chhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 451 RKT---NVTTQVRGTMGHIAPEYLSTGKSSE-RTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 451 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
... ......+|+.+|+|||.+.+..|.+ ..||||.|+++..|++|+.||.......... .......+..
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-------~~~~~~~~~~ 545 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-------KTNNYSDQRN 545 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-------hhhccccccc
Confidence 332 4456778999999999999999865 5899999999999999999997655432210 0000000000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ..+ ........+.....++.++++.+|.+|.|+++|++
T Consensus 546 ~-~~~--~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 546 I-FEG--PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred c-ccC--hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 0 000 01112344567788999999999999999999985
No 413
>PLN03150 hypothetical protein; Provisional
Probab=99.84 E-value=3e-21 Score=214.44 Aligned_cols=158 Identities=36% Similarity=0.628 Sum_probs=117.9
Q ss_pred chhHHHHHHHHHhcCCCCCCCCCCCCCCCCCC-----CcceeEEcCC-----CCeEEEEeCCCCccccCCccccCCCCCC
Q 007073 34 SLSGDALFALRTSLRVPNNQLRDWNQNQVNPC-----TWSNVICDNS-----NNVASVTLSSMNFSGTLSPRIGVLRTLS 103 (619)
Q Consensus 34 ~~~~~al~~~k~~l~~~~~~l~~w~~~~~~~c-----~w~gv~c~~~-----~~l~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (619)
..|..||+++|+++.++.. .+|++ +|| .|.||.|... ..++.|+|++|++.|.+|..++.|++|+
T Consensus 371 ~~~~~aL~~~k~~~~~~~~--~~W~g---~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~ 445 (623)
T PLN03150 371 LEEVSALQTLKSSLGLPLR--FGWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQ 445 (623)
T ss_pred chHHHHHHHHHHhcCCccc--CCCCC---CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCC
Confidence 4589999999999876542 48975 455 7999999631 1377888888888888888888888888
Q ss_pred EEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCc
Q 007073 104 TLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNN 183 (619)
Q Consensus 104 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 183 (619)
.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|.+|..+++|++|+.|+|++|+++|.+|..+..+
T Consensus 446 ~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~------------ 513 (623)
T PLN03150 446 SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGR------------ 513 (623)
T ss_pred EEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhc------------
Confidence 88888888888888778888888888888888887777777777777777777777777777665432
Q ss_pred ccccCCccccccCccccCCCCCCCCCCCCCCCC
Q 007073 184 LSGQIPVHLFQIPKYNFTGNNLNCGKTLPHSCE 216 (619)
Q Consensus 184 l~~~~p~~l~~l~~l~~~~n~~~c~~~~~~~c~ 216 (619)
+.++..+++.+|+..|+.+....|.
T Consensus 514 --------~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 514 --------LLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred --------cccCceEEecCCccccCCCCCCCCc
Confidence 0122346677888888876556675
No 414
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.84 E-value=6.2e-21 Score=225.82 Aligned_cols=171 Identities=37% Similarity=0.603 Sum_probs=125.0
Q ss_pred chhHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCcceeEEcCCCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCC
Q 007073 34 SLSGDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGIT 113 (619)
Q Consensus 34 ~~~~~al~~~k~~l~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 113 (619)
..|..||++||+++.+|.+.+.+|+. ..+||.|.||+|++.++|+.|+|++|++++.++..|..+++|+.|+|++|+++
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~w~~-~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~ 106 (968)
T PLN00113 28 AEELELLLSFKSSINDPLKYLSNWNS-SADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLS 106 (968)
T ss_pred HHHHHHHHHHHHhCCCCcccCCCCCC-CCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccC
Confidence 46899999999999888888999975 45899999999998889999999999999999999999999999999999999
Q ss_pred CCCccccc-ccccCcEeeecCCCccccC----------------------CCcccccccchhhhccCCcCCCCCCCcccc
Q 007073 114 GEIPEELG-NLSSLTSLDLDNNRLVGKI----------------------PPSLGNLKKLQFLTLSQNNFSGTIPDSLTT 170 (619)
Q Consensus 114 ~~~p~~~~-~l~~L~~L~L~~N~l~~~~----------------------p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 170 (619)
+.+|..+. ++++|++|+|++|+++|.+ |..++++++|+.|+|++|.+.+.+|..+.+
T Consensus 107 ~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 186 (968)
T PLN00113 107 GPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTN 186 (968)
T ss_pred CcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhh
Confidence 88887654 6777777777777666544 444555555555555555555555555555
Q ss_pred ccccccccCCCCcccccCCccccc---cCccccCCCCC
Q 007073 171 LSSLISIQLDSNNLSGQIPVHLFQ---IPKYNFTGNNL 205 (619)
Q Consensus 171 l~~L~~L~l~~N~l~~~~p~~l~~---l~~l~~~~n~~ 205 (619)
+++|++|+|++|++++.+|..+.+ +..|++.+|..
T Consensus 187 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 224 (968)
T PLN00113 187 LTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL 224 (968)
T ss_pred CcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCcc
Confidence 555555555555555555544332 33344555543
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=1.4e-20 Score=177.97 Aligned_cols=140 Identities=16% Similarity=0.154 Sum_probs=107.6
Q ss_pred cCccccCCCceEEEEEeCCCcEEEEEEeccCCCc-ch-------HH-----------------HHHHHHHHHHHccCCCc
Q 007073 299 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESP-GG-------DA-----------------AFQREVEMISVAVHRNL 353 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~-------~~-----------------~~~~E~~~l~~l~H~ni 353 (619)
...||+|+||.||+|...+|+.||||+++..... .. .. ....|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999888999999998643211 11 11 22349999999988877
Q ss_pred cceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecCCCCCcEEeC
Q 007073 354 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL-HEHCNPKIIHRDVKAANVLLD 432 (619)
Q Consensus 354 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~ivH~Dlkp~NIll~ 432 (619)
.....+.. ...++||||++++++...... ...++.....+++.|++.+|.|+ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK----DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh----cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 44333222 234899999998776544322 12478888999999999999999 688 999999999999998
Q ss_pred CCCcEEEcccccceee
Q 007073 433 EDFEAVVGDFGLAKLV 448 (619)
Q Consensus 433 ~~~~~kl~DfGla~~~ 448 (619)
++.++|+|||+|...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 478999999999754
No 416
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.84 E-value=5.4e-21 Score=208.58 Aligned_cols=261 Identities=21% Similarity=0.249 Sum_probs=192.4
Q ss_pred CCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHH--HHHccCCCccceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEM--ISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++...+.||++.|=+|.+|++++|. |+||++.+....-..+.|.++++- ...++|||.+++.-+-.+....++|-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5666789999999999999998887 899998765544445555544443 5567899999987777777778899999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee--ecc
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL--VDV 450 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~--~~~ 450 (619)
+.+ +|.+.+.. .+-+...+.+-|+.|+..|+.-+|+. +|+|||||.+||||+.-.=+.|+||-.-+- +..
T Consensus 103 vkh-nLyDRlST----RPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 103 VKH-NLYDRLST----RPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred Hhh-hhhhhhcc----chHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 876 88888764 34477888888999999999999999 999999999999999888899999976542 233
Q ss_pred CCcceeeecc----ccccccccccccCC-----------CCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHH
Q 007073 451 RKTNVTTQVR----GTMGHIAPEYLSTG-----------KSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 451 ~~~~~~~~~~----gt~~y~aPE~~~~~-----------~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 514 (619)
++....+.+. .-..|+|||.+... ..+++.||||.||++.|+++ |+++|..++.-+....
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~---- 250 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSG---- 250 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhcc----
Confidence 3333222222 23479999987431 15788999999999999999 6777754322100000
Q ss_pred HHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcccchhhh
Q 007073 515 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEW 582 (619)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 582 (619)
.....+..+..+-| ..+.+++..|++.||++|-++++.++.-++..|.+-|..+
T Consensus 251 --~~~~~e~~Le~Ied------------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP~yFy~F 304 (1431)
T KOG1240|consen 251 --NADDPEQLLEKIED------------VSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFPEYFYSF 304 (1431)
T ss_pred --CccCHHHHHHhCcC------------ccHHHHHHHHHccCchhccCHHHHHHhhhccccHHHHHHH
Confidence 00011111222222 2577899999999999999999999999999888877654
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=1.6e-20 Score=179.52 Aligned_cols=173 Identities=13% Similarity=0.099 Sum_probs=133.3
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcch--HHH------HHHHHHHHHHccCCCccceeeeeeC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGG--DAA------FQREVEMISVAVHRNLLRLIGFCTT 362 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~--~~~------~~~E~~~l~~l~H~niv~l~~~~~~ 362 (619)
...++|...+++|+|+||.||.+.. ++..+|||.+++...... ... +.+|+..+.++.|++|..+..++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 4678899999999999999999766 577899999975432221 122 6789999999999999999887553
Q ss_pred C--------CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC
Q 007073 363 P--------TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED 434 (619)
Q Consensus 363 ~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 434 (619)
. ...++||||++|.+|.+... ++. ....+++.++..+|+. |++|||+||+||+++.+
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~ 171 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKN 171 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCC
Confidence 2 35789999999999977632 221 2456899999999999 99999999999999998
Q ss_pred CcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHH
Q 007073 435 FEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 493 (619)
Q Consensus 435 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ell 493 (619)
+ ++++|||........... ..+.....+..++|+||||+.+....
T Consensus 172 g-i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 8 999999988644221111 11334455678999999999877654
No 418
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.82 E-value=3.5e-20 Score=193.66 Aligned_cols=215 Identities=22% Similarity=0.356 Sum_probs=162.3
Q ss_pred HHccCCCccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCe-EecCC
Q 007073 346 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI-IHRDV 424 (619)
Q Consensus 346 ~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i-vH~Dl 424 (619)
+.+.|.|+.+++|.+..+...+.|.+|+..|+|.+.+.. ....+++.....+..+++.||+|+|.. +| .|+.+
T Consensus 2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 567899999999999999999999999999999999987 334589999999999999999999987 55 89999
Q ss_pred CCCcEEeCCCCcEEEcccccceeeccC-CcceeeeccccccccccccccCC-------CCCcchhhHHHHHHHHHHHhCC
Q 007073 425 KAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGHIAPEYLSTG-------KSSERTDVFGYGIMLLELVTGQ 496 (619)
Q Consensus 425 kp~NIll~~~~~~kl~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~S~Gv~l~elltg~ 496 (619)
+++|.++|....+|++|||+....... .........-..-|.|||.+... ..+.++||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998766421 11111112234579999998763 1477899999999999999999
Q ss_pred CCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 497 RAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 497 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
.||+........ ..+...+.. .....+.+.+... .+....+..++.+||..+|.+||++++|-..++...
T Consensus 156 ~~~~~~~~~~~~-~eii~~~~~-----~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 156 GPFDLRNLVEDP-DEIILRVKK-----GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred CccccccccCCh-HHHHHHHHh-----cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 999864443332 112222222 0111111111110 133347899999999999999999999998888653
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=1.8e-19 Score=170.94 Aligned_cols=140 Identities=17% Similarity=0.170 Sum_probs=110.0
Q ss_pred cCccccCCCceEEEEEeCCCcEEEEEEeccCCCc-ch------------------------HHHHHHHHHHHHHccCCCc
Q 007073 299 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESP-GG------------------------DAAFQREVEMISVAVHRNL 353 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~------------------------~~~~~~E~~~l~~l~H~ni 353 (619)
...||+|+||.||+|...+|+.||||+++..... .. ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999998753211 00 1223578899999999987
Q ss_pred cceeeeeeCCCcceeEecccccchhhhh-hcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEe
Q 007073 354 LRLIGFCTTPTERLLVYPFMQNLSVAYR-LREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLL 431 (619)
Q Consensus 354 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll 431 (619)
.....+... ..++||||++++++... +.. ..++.....+++.|++.++.++|+ . ||+||||||+||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 554444332 35899999998855433 322 236677888999999999999999 8 99999999999999
Q ss_pred CCCCcEEEcccccceeec
Q 007073 432 DEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 432 ~~~~~~kl~DfGla~~~~ 449 (619)
+ ++.++|+|||++....
T Consensus 152 ~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 152 H-DGKPYIIDVSQAVELD 168 (190)
T ss_pred E-CCCEEEEEcccceecC
Confidence 9 7899999999998654
No 420
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.81 E-value=1.6e-19 Score=177.80 Aligned_cols=233 Identities=23% Similarity=0.273 Sum_probs=149.7
Q ss_pred CcccCccccCCCceEEEEEeC-CCcEEEEEEeccC--CCcchHHHHHHHHHHHHHcc----------C-CCccceeeeee
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAV----------H-RNLLRLIGFCT 361 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~----------H-~niv~l~~~~~ 361 (619)
+...+.||.|+++.||.+++. +|+++|||...-. ......+++.+|.-....+. | +-++++ +...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~-d~~~ 92 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPL-DLLR 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---S-EEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeee-EEEE
Confidence 345678999999999999976 5899999987532 23345667777765544432 2 222222 2211
Q ss_pred ---------CCC--------cceeEecccccchhhhhhcc---cCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 007073 362 ---------TPT--------ERLLVYPFMQNLSVAYRLRE---IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 421 (619)
Q Consensus 362 ---------~~~--------~~~lv~e~~~~gsL~~~l~~---~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH 421 (619)
... ..+++|+-+ .++|.+.+.. .......+....+..+..|+++.+++||+. |++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 111 124556655 3477666542 222233456667788889999999999999 9999
Q ss_pred cCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeeccccccccccccccC--------CCCCcchhhHHHHHHHHHHH
Q 007073 422 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST--------GKSSERTDVFGYGIMLLELV 493 (619)
Q Consensus 422 ~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~S~Gv~l~ell 493 (619)
+||+|+|++++.+|.++|+||+.....+.. ......+..|.+||.... -.+|.+.|.|++|+++|.|.
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTR----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEE----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCce----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 999999999999999999999987654321 111335678999997743 24789999999999999999
Q ss_pred hCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCC
Q 007073 494 TGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDR 560 (619)
Q Consensus 494 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R 560 (619)
+|..||+.......... ....+. +.++.+..|+..+++.+|.+|
T Consensus 245 C~~lPf~~~~~~~~~~~----------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW----------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG----------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc----------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999986543322211 111233 667889999999999999988
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=2.5e-19 Score=167.48 Aligned_cols=184 Identities=21% Similarity=0.110 Sum_probs=137.3
Q ss_pred ccCccccCCCceEEEEEeCCCcEEEEEEeccCCC---cchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeEeccc
Q 007073 298 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFES---PGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
+...|++|+||+||.+.. ++.+++.+.+..... .-....|.+|+++++++. |+++.+++++ ...+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 467899999999997776 678888777754322 111225789999999996 5889999886 4568999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDV-KAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
.|.+|...... ....++.|+++++.++|+. ||+|||| ||+|||++.++.++|+|||+|.......
T Consensus 81 ~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 81 AGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred cCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 99888643321 1134678999999999999 9999999 7999999999999999999998654322
Q ss_pred cc----e--------eeeccccccccccccccCC-CCC-cchhhHHHHHHHHHHHhCCCCCC
Q 007073 453 TN----V--------TTQVRGTMGHIAPEYLSTG-KSS-ERTDVFGYGIMLLELVTGQRAID 500 (619)
Q Consensus 453 ~~----~--------~~~~~gt~~y~aPE~~~~~-~~~-~~~Dv~S~Gv~l~elltg~~p~~ 500 (619)
.. . ......++.|++|+...-- ..+ ...+.++-|+-+|.++|+..+.-
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 10 0 0112357778888754322 233 56788899999999999998764
No 422
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.79 E-value=4.4e-20 Score=192.68 Aligned_cols=236 Identities=25% Similarity=0.251 Sum_probs=183.2
Q ss_pred ccccCCCceEEEEE----eCCCcEEEEEEeccCCCcchH-HHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeEecccc
Q 007073 301 VLGQGGFGKVYRGV----LADGTKVAVKRLTDFESPGGD-AAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYPFMQ 374 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~----~~~g~~vAvK~l~~~~~~~~~-~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~ 374 (619)
.+|+|+||.|+.+. ...|+-+|+|.+++....... .....|..++...+ ||.+|++.-.+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999865 234778999988754322221 24456888888887 9999999999999999999999999
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
+|.+...+..... ++......+...++-+++++|+. +|+|||+|++||+++.+|++++.|||+++..-..+..
T Consensus 81 gg~lft~l~~~~~----f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM----FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred cchhhhccccCCc----hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 9999888875332 66667777788899999999999 9999999999999999999999999999865332222
Q ss_pred eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccccc
Q 007073 455 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLN 534 (619)
Q Consensus 455 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 534 (619)
+||..|||||++. .+...+|.||||++++||+||-.||.. +....+. ...
T Consensus 154 -----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il---------~~~-- 203 (612)
T KOG0603|consen 154 -----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRIL---------KAE-- 203 (612)
T ss_pred -----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHh---------hhc--
Confidence 7999999999997 567889999999999999999999863 1111111 111
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCH--HHHHHHHhcC
Q 007073 535 KNYNIQEVETMIQVALLCTQASPEDRPAM--SEVVRMLEGE 573 (619)
Q Consensus 535 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~--~evl~~L~~~ 573 (619)
...+........+++..+...+|..|--. ..+.+..+..
T Consensus 204 ~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~ 244 (612)
T KOG0603|consen 204 LEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHE 244 (612)
T ss_pred cCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccc
Confidence 12355566778888889999999999765 3444444443
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=2.2e-18 Score=192.32 Aligned_cols=201 Identities=19% Similarity=0.193 Sum_probs=164.0
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc---CCCccceeeeeeCC
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV---HRNLLRLIGFCTTP 363 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 363 (619)
.+.++..+.|.+.+.||+|+||+||+|...+|+.||+|+-+....-+ |.--.+++.+++ -+.|..+...+.-.
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----FYICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee----eeehHHHHHhhchhhhcchHHHHHHHccC
Confidence 45677788899999999999999999998889999999876543321 222223344444 34566666677778
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-------CCCc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-------EDFE 436 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-------~~~~ 436 (619)
+.-++|+||.+.|+|.+++.. ...+++.....++.|+++.+++||.. +||||||||+|+||. +...
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~----~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINT----NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred CcceeeeeccccccHHHhhcc----CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccc
Confidence 889999999999999999983 44589999999999999999999999 999999999999994 2356
Q ss_pred EEEcccccceeeccC-CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCC
Q 007073 437 AVVGDFGLAKLVDVR-KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRA 498 (619)
Q Consensus 437 ~kl~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p 498 (619)
++|+|||.+..+..- +.......++|-.+-.+|...++.++.+.|.|.++.+++-|+.|+..
T Consensus 840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 899999999766432 22355667789999999999999999999999999999999999753
No 424
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=9.4e-18 Score=165.15 Aligned_cols=254 Identities=24% Similarity=0.330 Sum_probs=164.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeCC-Cc-----------------------------------EEEEEEeccCCCcchH
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLAD-GT-----------------------------------KVAVKRLTDFESPGGD 335 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-g~-----------------------------------~vAvK~l~~~~~~~~~ 335 (619)
..++|++.+.||+|....||.+...+ |. +.|+|++.........
T Consensus 155 tiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~~ 234 (598)
T KOG4158|consen 155 TIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSGD 234 (598)
T ss_pred chhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCch
Confidence 44678889999999999999987531 10 3677777544333333
Q ss_pred HHHHH----HH------------HH--HHH--------ccCCCccceeeeeeCC--------------------------
Q 007073 336 AAFQR----EV------------EM--ISV--------AVHRNLLRLIGFCTTP-------------------------- 363 (619)
Q Consensus 336 ~~~~~----E~------------~~--l~~--------l~H~niv~l~~~~~~~-------------------------- 363 (619)
..+.+ |. .+ .+. -+|||||++.+++.+.
T Consensus 235 ~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~ 314 (598)
T KOG4158|consen 235 AHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGE 314 (598)
T ss_pred HHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCC
Confidence 32222 21 11 111 3599999998876332
Q ss_pred -CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe--CCC--CcEE
Q 007073 364 -TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL--DED--FEAV 438 (619)
Q Consensus 364 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~--~~~k 438 (619)
...++||.-++. +|..++... ..+...+.-|+.|+.+|..|||.+ ||.|||+|++|||+ |+| ..+.
T Consensus 315 ~~tlylvMkrY~~-tLr~yl~~~-----~~s~r~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LV 385 (598)
T KOG4158|consen 315 PKTLYLVMKRYRQ-TLREYLWTR-----HRSYRTGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLV 385 (598)
T ss_pred CceEEEehhcchh-hHHHHHhcC-----CCchHHHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEE
Confidence 224666655543 666666542 245556777899999999999999 99999999999998 344 3568
Q ss_pred EcccccceeeccC-----CcceeeeccccccccccccccCCCC------CcchhhHHHHHHHHHHHhCCCCCCCCccccc
Q 007073 439 VGDFGLAKLVDVR-----KTNVTTQVRGTMGHIAPEYLSTGKS------SERTDVFGYGIMLLELVTGQRAIDFSRLEEE 507 (619)
Q Consensus 439 l~DfGla~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~------~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~ 507 (619)
|+|||.+-.-+.. .....-...|...-||||+....+- -.|+|.|+.|.+.||+++...||.....
T Consensus 386 vaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe--- 462 (598)
T KOG4158|consen 386 VADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE--- 462 (598)
T ss_pred EcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch---
Confidence 9999986432210 0111112346778999999865432 4689999999999999999999964111
Q ss_pred cchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 007073 508 DDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 571 (619)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 571 (619)
..+ +... .++..+ +..+...+..+.+++...++.||++|++..-....|.
T Consensus 463 --m~L-~~r~--Yqe~qL---------Palp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 463 --MLL-DTRT--YQESQL---------PALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred --hee-chhh--hhhhhC---------CCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 000 0000 011111 1123344467888999999999999999776665554
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=2.1e-17 Score=157.69 Aligned_cols=136 Identities=21% Similarity=0.241 Sum_probs=103.8
Q ss_pred cccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-----cCCCccceeeeeeCCC---c-ce
Q 007073 297 SEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-----VHRNLLRLIGFCTTPT---E-RL 367 (619)
Q Consensus 297 ~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~~~~~~~~---~-~~ 367 (619)
...+.||+|+||.||. .-.++.. +||++.... ....+.+.+|+.+++.+ .||||++++|++.++. . ..
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 4467899999999996 2224444 799876432 23457789999999999 5799999999998874 2 23
Q ss_pred eEecc--cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHH-HHHHhcCCCCeEecCCCCCcEEeCC----CCcEEEc
Q 007073 368 LVYPF--MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL-EYLHEHCNPKIIHRDVKAANVLLDE----DFEAVVG 440 (619)
Q Consensus 368 lv~e~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L-~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~ 440 (619)
+|+|| +.+|+|.+++... .++.. ..++.++..++ +|||++ +|+||||||+||+++. +..++|+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~-----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC-----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred EEecCCCCcchhHHHHHHcc-----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEE
Confidence 68999 5579999999652 14444 35577777777 999999 9999999999999974 3489999
Q ss_pred ccccc
Q 007073 441 DFGLA 445 (619)
Q Consensus 441 DfGla 445 (619)
||+-+
T Consensus 152 Dg~G~ 156 (210)
T PRK10345 152 DNIGE 156 (210)
T ss_pred ECCCC
Confidence 95443
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.73 E-value=3.1e-17 Score=160.49 Aligned_cols=142 Identities=14% Similarity=0.097 Sum_probs=109.5
Q ss_pred CCcccCccccCCCceEEEEE--eCCCcEEEEEEeccCCCc-------------------c----hHHHHHHHHHHHHHcc
Q 007073 295 NFSEKNVLGQGGFGKVYRGV--LADGTKVAVKRLTDFESP-------------------G----GDAAFQREVEMISVAV 349 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~--~~~g~~vAvK~l~~~~~~-------------------~----~~~~~~~E~~~l~~l~ 349 (619)
.|.+.+.||+|+||.||+|. ..+|+.||+|+++..... . ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 568999999998643210 0 0123568999999997
Q ss_pred CCC--ccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCC
Q 007073 350 HRN--LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK-IIHRDVKA 426 (619)
Q Consensus 350 H~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-ivH~Dlkp 426 (619)
+.. +.+++++ ...++||||++++++....... ..........++.|++.++.+||+. + |+||||||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD----VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc----CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 633 3344432 2458999999998886654221 2245556678999999999999999 9 99999999
Q ss_pred CcEEeCCCCcEEEcccccceee
Q 007073 427 ANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 427 ~NIll~~~~~~kl~DfGla~~~ 448 (619)
+||+++ ++.++|+|||.+...
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhcc
Confidence 999999 789999999998754
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=5.2e-17 Score=157.10 Aligned_cols=135 Identities=19% Similarity=0.267 Sum_probs=113.7
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEeccCCCcc-------hHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 300 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG-------GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+.||+|++|.||+|.+ +|..|++|+........ ....+.+|++++..+.|+++.....++......+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999998 67889999865332111 124577899999999999998877777777888999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
++|++|.+.+... .. .+..++.+++.+|.++|+. +++|||++|.||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999888642 11 7788999999999999999 999999999999999 78899999999864
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.72 E-value=5.1e-17 Score=155.41 Aligned_cols=144 Identities=20% Similarity=0.148 Sum_probs=111.1
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCc---------------------chHHHHHHHHHHHHH
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESP---------------------GGDAAFQREVEMISV 347 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~---------------------~~~~~~~~E~~~l~~ 347 (619)
+......|...+.||+|+||.||++...+|+.||||++...... .....+..|..++..
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 33344447788999999999999999888999999987532100 011235678888988
Q ss_pred ccCCC--ccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 007073 348 AVHRN--LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVK 425 (619)
Q Consensus 348 l~H~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 425 (619)
+.|++ +...++ ....++||||+++++|...... .....++.+++.++.++|+. +|+|||||
T Consensus 90 l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~ 152 (198)
T cd05144 90 LYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDLS 152 (198)
T ss_pred HHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCCC
Confidence 88874 444443 2456899999999988764321 23457889999999999998 99999999
Q ss_pred CCcEEeCCCCcEEEcccccceeec
Q 007073 426 AANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 426 p~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|+||++++++.++|+|||++....
T Consensus 153 p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cccEEEcCCCcEEEEECCccccCC
Confidence 999999999999999999997554
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=4.6e-17 Score=155.90 Aligned_cols=131 Identities=19% Similarity=0.280 Sum_probs=107.5
Q ss_pred ccccCCCceEEEEEeCCCcEEEEEEeccCCCcc-------hHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 301 VLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG-------GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
.||+|+||.||+|.+ +|..|++|......... ....+.+|++++..+.|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 57899999865432111 1256778999999999988766655666667789999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
++++|.+.+.... . .++.+++.+|.++|+. +++|||++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~-----~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN-----D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH-----H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999988775411 0 7899999999999999 999999999999999 78999999999875
No 430
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.70 E-value=5.6e-18 Score=173.78 Aligned_cols=175 Identities=25% Similarity=0.339 Sum_probs=129.7
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++.|+++...+|.+++..... ....++.....++.|++.|+.| + +.+|+|+||.||+...+.++||+|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~-~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT-GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc-ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 46789999999999999975433 3346788899999999999999 6 899999999999999999999999999
Q ss_pred ceeeccCC-----cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH
Q 007073 445 AKLVDVRK-----TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL 519 (619)
Q Consensus 445 a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 519 (619)
...+.... ....+...||..||+||.+.+..|+.|+||||+|++++|+++ +|....
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T~~---------------- 463 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFSTQF---------------- 463 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---HhccHH----------------
Confidence 98775444 223456679999999999999999999999999999999987 121100
Q ss_pred hhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 007073 520 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEV 566 (619)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev 566 (619)
.....+.++-+..+.+.+..+. +.=..++.+++...|.+||++.++
T Consensus 464 er~~t~~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 464 ERIATLTDIRDGIIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred HHHHhhhhhhcCCCChHHhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 0111112222222221111111 123578889999999999955443
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=7.2e-17 Score=177.63 Aligned_cols=140 Identities=16% Similarity=0.222 Sum_probs=113.0
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEe-ccCCCc------chHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRL-TDFESP------GGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l-~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
.....|...+.||+|+||+||+|.+.+. .+++|+. .+.... ...+.+.+|+++++.++|++++....++..+
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 3344556789999999999999998544 4444433 221111 1235688999999999999999888888777
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
...++||||+++++|.+++. ....++.+++++|.|||+. +++|||+||+||++ +++.++|+|||
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFG 472 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFG 472 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCc
Confidence 78899999999999988775 3467899999999999999 99999999999999 67789999999
Q ss_pred ccee
Q 007073 444 LAKL 447 (619)
Q Consensus 444 la~~ 447 (619)
+++.
T Consensus 473 la~~ 476 (535)
T PRK09605 473 LGKY 476 (535)
T ss_pred cccc
Confidence 9975
No 432
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.69 E-value=1.5e-17 Score=182.07 Aligned_cols=212 Identities=23% Similarity=0.252 Sum_probs=144.6
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
...+|+.++.|..|++|.||..+++ ..+++|+|+ .+... +.+- ++.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcc-cccch------hhhc--cccccCCccee----------------
Confidence 3467888999999999999999986 467788853 22110 0000 22222333333
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
|+-...+.... .++. +.+.+++|+|+. +|+|||+||+|.+|+.-|++|++|||+.+..-.
T Consensus 136 -----gDc~tllk~~g----~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 -----GDCATLLKNIG----PLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred -----chhhhhcccCC----CCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 33333333211 1222 227789999999 999999999999999999999999999875421
Q ss_pred CC--------------cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007073 451 RK--------------TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 451 ~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 516 (619)
.. .....+++||+.|.|||++....|...+|+|++|+++||.+-|+.||.....++-.+..+.+.+
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i 275 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI 275 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc
Confidence 10 0112356899999999999999999999999999999999999999987655443332222211
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMS 564 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 564 (619)
... .. ......+..+++.+.++.+|.+|--..
T Consensus 276 ~wp------E~----------dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 276 EWP------EE----------DEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred ccc------cc----------CcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 111 11 112235778899999999999995433
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=6e-15 Score=134.02 Aligned_cols=135 Identities=18% Similarity=0.157 Sum_probs=113.8
Q ss_pred ccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccC--CCccceeeeeeCCCcceeEeccccc
Q 007073 298 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVH--RNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.++..++| .++.+++++....+..++++||+++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 35679999999999999854 7899998764322 5678899999999987 5888999888888889999999998
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+.+... +......++.+++++++++|.....+++|+|++|+||+++..+.+++.|||.++.
T Consensus 78 ~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 78 ETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred eecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 766543 4456677899999999999986445799999999999999989999999999863
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=3.6e-15 Score=141.22 Aligned_cols=137 Identities=20% Similarity=0.258 Sum_probs=97.7
Q ss_pred cCccccCCCceEEEEEeCCCcEEEEEEeccCCCc-chHHHH----------------------HHHHHHHHHccCCC--c
Q 007073 299 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESP-GGDAAF----------------------QREVEMISVAVHRN--L 353 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~~~----------------------~~E~~~l~~l~H~n--i 353 (619)
.+.||+|+||+||+|...+|+.||||+++..... .....+ ..|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999888999999988643211 111111 24555555554433 3
Q ss_pred cceeeeeeCCCcceeEecccccchhhhh-hcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEe
Q 007073 354 LRLIGFCTTPTERLLVYPFMQNLSVAYR-LREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLL 431 (619)
Q Consensus 354 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll 431 (619)
.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++|. . +|+|+||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 334332 246899999999654321 21111 11 4567889999999999999 7 99999999999999
Q ss_pred CCCCcEEEcccccceeec
Q 007073 432 DEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 432 ~~~~~~kl~DfGla~~~~ 449 (619)
+ ++.++++|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8899999999997543
No 435
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.60 E-value=9.9e-17 Score=140.73 Aligned_cols=129 Identities=26% Similarity=0.465 Sum_probs=112.5
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
.++++.|.||+|.++ .+|+.++.|.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 357888999999998 77888999999999999999999 88889999999999999999999 8999999999999999
Q ss_pred ccCCcCC-CCCCCccccccccccccCCCCcccccCCccccccCccccCCCCCCC
Q 007073 155 LSQNNFS-GTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLNC 207 (619)
Q Consensus 155 l~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~~~c 207 (619)
|++|++. ..+|..|+-++.|+.|+|+.|.+. .+|..++++++|.+.++..+-
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCc
Confidence 9999986 357888999999999999999998 889888888887776665543
No 436
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.54 E-value=5.8e-14 Score=137.67 Aligned_cols=136 Identities=18% Similarity=0.156 Sum_probs=104.6
Q ss_pred cCccc-cCCCceEEEEEeCCCcEEEEEEeccCC------------CcchHHHHHHHHHHHHHccCCCc--cceeeeeeCC
Q 007073 299 KNVLG-QGGFGKVYRGVLADGTKVAVKRLTDFE------------SPGGDAAFQREVEMISVAVHRNL--LRLIGFCTTP 363 (619)
Q Consensus 299 ~~~lg-~G~fg~Vy~~~~~~g~~vAvK~l~~~~------------~~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~ 363 (619)
..+|| .|+.|+||++... +..++||+..... +......+.+|++++..++|+++ .+.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35687 8999999999885 7889999875311 01223567889999999998885 6677665433
Q ss_pred Cc----ceeEeccccc-chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 364 TE----RLLVYPFMQN-LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 364 ~~----~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
.. .++|+|++++ .+|.+++... .++.. .+.+++.++.+||+. ||+||||||.|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 22 3599999997 6888877542 13332 357899999999999 999999999999999988999
Q ss_pred Eccccccee
Q 007073 439 VGDFGLAKL 447 (619)
Q Consensus 439 l~DfGla~~ 447 (619)
|+|||.+..
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999998874
No 437
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.52 E-value=2.3e-15 Score=165.18 Aligned_cols=254 Identities=21% Similarity=0.264 Sum_probs=184.1
Q ss_pred cCCcccCccccCCCceEEEEEeC--CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeE
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA--DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~--~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 369 (619)
..|...+.||+|+|+.|-..... ....+|+|.+.... ..........|..+-..+. |+|++++++....++..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45666778999999999888753 34456667654332 2223344445777766666 99999999999999999999
Q ss_pred ecccccchhhhhhc-ccCCCCCCcCHHHHHHHHHHHHHHHHHHH-hcCCCCeEecCCCCCcEEeCCCC-cEEEcccccce
Q 007073 370 YPFMQNLSVAYRLR-EIKPGEPVLDWVTRKRVALGAARGLEYLH-EHCNPKIIHRDVKAANVLLDEDF-EAVVGDFGLAK 446 (619)
Q Consensus 370 ~e~~~~gsL~~~l~-~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~ 446 (619)
.+|..++++..-+. ... ...+......+..|+..++.|+| +. ++.|+|+||+|.+++..+ ..+++|||+|.
T Consensus 100 ~~~s~g~~~f~~i~~~~~---~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDS---TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cCcccccccccccccCCc---cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 99999999988883 221 12455566778999999999999 77 999999999999999999 99999999998
Q ss_pred eecc-C-Ccceeeeccc-cccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 447 LVDV-R-KTNVTTQVRG-TMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 447 ~~~~-~-~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
.+.. . .........| ++.|+|||...+. -..+..|+||.|+++.-+++|..|++........ ...|....
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~---~~~~~~~~--- 247 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR---YSSWKSNK--- 247 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc---ceeecccc---
Confidence 7765 2 2223334567 9999999999885 4478899999999999999999999865433211 11111110
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV 567 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 567 (619)
.. ..............++..+++..+|+.|.+.+++.
T Consensus 248 ~~--------~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 248 GR--------FTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred cc--------cccCccccCChhhhhcccccccCCchhcccccccc
Confidence 00 00011122223566778888889999999977764
No 438
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.50 E-value=1.5e-15 Score=156.34 Aligned_cols=180 Identities=22% Similarity=0.259 Sum_probs=144.3
Q ss_pred CccccccchhcccchhHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCcceeEEcCCCCeEEEEeCCCCccccCCccccCCC
Q 007073 21 DPDLHNGWLTFLCSLSGDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLR 100 (619)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~al~~~k~~l~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~ 100 (619)
..+|+-|.++.....-.-.|.++++ |+.++|.+..... -+|+- ..+|..|+|++|+|+...+..|..|.
T Consensus 273 ~l~L~~N~l~~vn~g~lfgLt~L~~-L~lS~NaI~rih~-----d~Wsf-----tqkL~~LdLs~N~i~~l~~~sf~~L~ 341 (873)
T KOG4194|consen 273 HLNLETNRLQAVNEGWLFGLTSLEQ-LDLSYNAIQRIHI-----DSWSF-----TQKLKELDLSSNRITRLDEGSFRVLS 341 (873)
T ss_pred eeecccchhhhhhcccccccchhhh-hccchhhhheeec-----chhhh-----cccceeEeccccccccCChhHHHHHH
Confidence 3456677777777766666666665 6667776654422 23432 24899999999999988889999999
Q ss_pred CCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCC---cccccccchhhhccCCcCCCCCCCccccccccccc
Q 007073 101 TLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPP---SLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISI 177 (619)
Q Consensus 101 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 177 (619)
.|++|+|++|+|+..-...|..+++|+.|||++|.|++.+.+ .|..|++|+.|+|.+|+|..+.-.+|..+++|+.|
T Consensus 342 ~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~L 421 (873)
T KOG4194|consen 342 QLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHL 421 (873)
T ss_pred HhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCccccee
Confidence 999999999999977777899999999999999999987764 57789999999999999994444589999999999
Q ss_pred cCCCCcccccCCcccc--ccCccccCCCCCCCCCCC
Q 007073 178 QLDSNNLSGQIPVHLF--QIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 178 ~l~~N~l~~~~p~~l~--~l~~l~~~~n~~~c~~~~ 211 (619)
||.+|.|-..-|..|. .+.+|-+..-.+.|+|++
T Consensus 422 dL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql 457 (873)
T KOG4194|consen 422 DLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQL 457 (873)
T ss_pred cCCCCcceeecccccccchhhhhhhcccceEEeccH
Confidence 9999999977777776 456677888889999985
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.49 E-value=3.1e-15 Score=131.36 Aligned_cols=129 Identities=26% Similarity=0.435 Sum_probs=115.4
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCcc-ccCCCcccccccchhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLV-GKIPPSLGNLKKLQFL 153 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L 153 (619)
..+|+.|++++|+|+ .+|..+++|++|+.|+++-|++. .+|..|+.++.|+.|||.+|+++ ..+|+.|..++.|+.|
T Consensus 55 l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlral 132 (264)
T KOG0617|consen 55 LKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRAL 132 (264)
T ss_pred hhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHH
Confidence 458999999999998 88899999999999999999999 99999999999999999999987 4579999999999999
Q ss_pred hccCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNC 207 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c 207 (619)
+|+.|.|. .+|..++++++|+.|.+..|.+- .+|..++ ++..|.+.||...-
T Consensus 133 yl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~v 187 (264)
T KOG0617|consen 133 YLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTV 187 (264)
T ss_pred HhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeee
Confidence 99999999 89999999999999999999998 8997665 55667888888643
No 440
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=5.9e-14 Score=135.64 Aligned_cols=204 Identities=18% Similarity=0.275 Sum_probs=142.9
Q ss_pred HHHHHccCCCccceeeeeeCC-----CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007073 343 EMISVAVHRNLLRLIGFCTTP-----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 417 (619)
Q Consensus 343 ~~l~~l~H~niv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~ 417 (619)
.-+-++.|.|||+++.|+.+. .+..++.|||.-|++..+|++.......+....-.+++.||..||.|||+ |.|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 345567799999999998654 34678999999999999999877777778888888999999999999998 478
Q ss_pred CeEecCCCCCcEEeCCCCcEEEcccccceeecc----CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHH
Q 007073 418 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV----RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 493 (619)
Q Consensus 418 ~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ell 493 (619)
+|+|+++.-+-|++..++-+|++----. .... ..........+-++|.|||+-.....+.++|||+||....||.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 8999999999999999998887532111 1100 0011111234678999999887778889999999999999998
Q ss_pred hCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 494 TGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 494 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
-|..--..+......+....... ..+...+ =..++..|++..|..||+|.+++..
T Consensus 277 ilEiq~tnseS~~~~ee~ia~~i----------~~len~l-----------qr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIANVI----------IGLENGL-----------QRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred HheeccCCCcceeehhhhhhhhe----------eeccCcc-----------ccCcCcccccCCCCCCcchhhhhcC
Confidence 87643221111111100000000 0000001 1246678999999999999998743
No 441
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=4.2e-13 Score=143.00 Aligned_cols=142 Identities=23% Similarity=0.260 Sum_probs=100.5
Q ss_pred cCccccCCCceEEEEEeCCCcEEEEEEeccCCCcch---------------------------------------HHHHH
Q 007073 299 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGG---------------------------------------DAAFQ 339 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~---------------------------------------~~~~~ 339 (619)
.+.||.|++|.||+|+.++|+.||||+.+......- +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999999864211000 01244
Q ss_pred HHHHHHHHcc----CCCccceeeee-eCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHH-HHHHHHh
Q 007073 340 REVEMISVAV----HRNLLRLIGFC-TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR-GLEYLHE 413 (619)
Q Consensus 340 ~E~~~l~~l~----H~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~-~L~~LH~ 413 (619)
+|.+.+.+++ |.+-+.+-.++ ......++||||++|+++.+.......+ . .+.+++..+++ .+..+|.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~---~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG---L---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC---C---CHHHHHHHHHHHHHHHHHh
Confidence 4555554442 33333333333 2245679999999999998876532111 1 24456666666 4678898
Q ss_pred cCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 414 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 414 ~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
. |++|+|++|.||+++.++.++++|||++..+.
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8 99999999999999999999999999998664
No 442
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.39 E-value=3e-13 Score=139.53 Aligned_cols=177 Identities=24% Similarity=0.252 Sum_probs=111.8
Q ss_pred cCccccccchhcccchhHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCcceeEEcCCCCeEEEEeCCCCccccCCccccCC
Q 007073 20 FDPDLHNGWLTFLCSLSGDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVL 99 (619)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~al~~~k~~l~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l 99 (619)
-..+|.+|.++.+.+.+..||.+++. ++.+.|.++.... ||.-.+ .++++|+|++|.|+..-...|..|
T Consensus 128 ~~L~L~~N~I~sv~se~L~~l~alrs-lDLSrN~is~i~~----~sfp~~------~ni~~L~La~N~It~l~~~~F~~l 196 (873)
T KOG4194|consen 128 EKLDLRHNLISSVTSEELSALPALRS-LDLSRNLISEIPK----PSFPAK------VNIKKLNLASNRITTLETGHFDSL 196 (873)
T ss_pred eEEeeeccccccccHHHHHhHhhhhh-hhhhhchhhcccC----CCCCCC------CCceEEeecccccccccccccccc
Confidence 34577799999999999999999987 7777777765532 232222 267777777777776666677777
Q ss_pred CCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccc------------------------hhhhc
Q 007073 100 RTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKL------------------------QFLTL 155 (619)
Q Consensus 100 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L------------------------~~L~l 155 (619)
.+|..|-|+.|+|+...+..|.+|++|+.|+|..|+|.-.-.-.|.+|++| ++|+|
T Consensus 197 nsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L 276 (873)
T KOG4194|consen 197 NSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNL 276 (873)
T ss_pred chheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeec
Confidence 777777777777774444556667777777777777762213444555554 45555
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNC 207 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c 207 (619)
+.|+++..--.++.+|+.|+.|+||.|.|...-++... ++..|+++.|..+-
T Consensus 277 ~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~ 331 (873)
T KOG4194|consen 277 ETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITR 331 (873)
T ss_pred ccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEecccccccc
Confidence 55555433344555666666666666666533333332 34455666666543
No 443
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.38 E-value=2.2e-14 Score=141.83 Aligned_cols=124 Identities=29% Similarity=0.450 Sum_probs=105.9
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCccc-ccccchhhhc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLG-NLKKLQFLTL 155 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l 155 (619)
+|++||.-+|-++ .+|+.++.|.+|.-|+|..|+|. .+| +|++++.|.+|+++.|+|+ .+|...+ ++++|.+|||
T Consensus 184 ~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDL 259 (565)
T KOG0472|consen 184 RLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDL 259 (565)
T ss_pred HHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeec
Confidence 7888888888777 78888999999999999999998 788 6889999999999999998 7887766 8899999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCcccccc--CccccCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQI--PKYNFTGNNLN 206 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l--~~l~~~~n~~~ 206 (619)
..|+++ ..|+.+..+.+|..||+++|.|+ .+|..++++ .+|.+.|||..
T Consensus 260 RdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 260 RDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNLHLKFLALEGNPLR 310 (565)
T ss_pred cccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccceeeehhhcCCchH
Confidence 999998 88999988999999999999998 688777765 55778888864
No 444
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.31 E-value=2e-13 Score=141.58 Aligned_cols=132 Identities=28% Similarity=0.434 Sum_probs=75.1
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCC----------------------CCcccccccccCcEeeecC
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITG----------------------EIPEELGNLSSLTSLDLDN 133 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~----------------------~~p~~~~~l~~L~~L~L~~ 133 (619)
.+|..+|||.|++. .+|..+-++++|+.|+||+|+|+. .+|..+++|++|+.|++.+
T Consensus 222 ~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~ 300 (1255)
T KOG0444|consen 222 HNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANN 300 (1255)
T ss_pred hhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhcc
Confidence 35666666666665 556666666666666666555551 4555555555555555555
Q ss_pred CCcc-ccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCCC
Q 007073 134 NRLV-GKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGK 209 (619)
Q Consensus 134 N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~~ 209 (619)
|+++ .-+|..+++|.+|+.+..++|++. .+|..+..|..|+.|.|++|++. .+|+.+ ..+..|++..|+..-.+
T Consensus 301 NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMP 378 (1255)
T KOG0444|consen 301 NKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMP 378 (1255)
T ss_pred CcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCC
Confidence 5543 124555555555555555555555 56666666666666666666666 566543 34444566666655444
Q ss_pred C
Q 007073 210 T 210 (619)
Q Consensus 210 ~ 210 (619)
|
T Consensus 379 P 379 (1255)
T KOG0444|consen 379 P 379 (1255)
T ss_pred C
Confidence 3
No 445
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.31 E-value=9.8e-12 Score=115.62 Aligned_cols=130 Identities=22% Similarity=0.170 Sum_probs=96.6
Q ss_pred cCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccc-eeeeeeCCCcceeEecccccch
Q 007073 299 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR-LIGFCTTPTERLLVYPFMQNLS 377 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~-l~~~~~~~~~~~lv~e~~~~gs 377 (619)
.+.|+.|.++.||++... |..|++|....... ....+..|+.+++.+.+.++++ ++.+. ....++||||+++.+
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence 356899999999999975 78899998754321 2345678999999887666554 44433 334689999999987
Q ss_pred hhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 378 VAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC--NPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 378 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
+... . . ....++.+++++|+.||+.. ..+++|+|++|.||+++ ++.++++|||.+.
T Consensus 78 l~~~--~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 78 LLTE--D-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccc--c-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 7543 0 1 11245678999999999982 22369999999999999 6689999999876
No 446
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.29 E-value=4.7e-12 Score=136.45 Aligned_cols=146 Identities=20% Similarity=0.198 Sum_probs=93.6
Q ss_pred cCCcccCccccCCCceEEEEEeCC-CcEEEEEEeccCCCc---------------------------------chHH---
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESP---------------------------------GGDA--- 336 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~---------------------------------~~~~--- 336 (619)
..|+. +.||+|++|.||+|+.++ |+.||||+.+....+ +-.+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 789999999999999987 999999998743100 0011
Q ss_pred ---HHHHHHHHHHHcc----CCCccceeeeeeC-CCcceeEecccccchhhhhhcccCCC--CCCcCHHHHHHHHHHHHH
Q 007073 337 ---AFQREVEMISVAV----HRNLLRLIGFCTT-PTERLLVYPFMQNLSVAYRLREIKPG--EPVLDWVTRKRVALGAAR 406 (619)
Q Consensus 337 ---~~~~E~~~l~~l~----H~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~--~~~l~~~~~~~i~~~ia~ 406 (619)
+|.+|+..+.+++ +.+.+.+-.++.+ ..+.++||||++|+.+.+...-...+ ...+.......++.|
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q--- 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ--- 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 2344444444332 3344444344432 45678999999999997642211111 011222222222233
Q ss_pred HHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEcccccceeecc
Q 007073 407 GLEYLHEHCNPKIIHRDVKAANVLLDEDF----EAVVGDFGLAKLVDV 450 (619)
Q Consensus 407 ~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfGla~~~~~ 450 (619)
+... |++|+|+||.||+++.++ .+++.|||++..++.
T Consensus 276 ----if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 ----VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ----HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3446 999999999999999888 999999999987754
No 447
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.28 E-value=1e-12 Score=136.35 Aligned_cols=109 Identities=29% Similarity=0.427 Sum_probs=101.8
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCC-CCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITG-EIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
+|.+|+||+|+++ .+|..+++|+.|+.|++.+|+++- -||..+++|.+|+.+..++|.+. .+|..++.|..|+.|.|
T Consensus 269 ~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L 346 (1255)
T KOG0444|consen 269 NLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKL 346 (1255)
T ss_pred hhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcc
Confidence 7889999999998 899999999999999999999873 48999999999999999999999 99999999999999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 189 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 189 (619)
++|++. .+|+++.-|+.|+.||+..|.=- ..|
T Consensus 347 ~~NrLi-TLPeaIHlL~~l~vLDlreNpnL-VMP 378 (1255)
T KOG0444|consen 347 DHNRLI-TLPEAIHLLPDLKVLDLRENPNL-VMP 378 (1255)
T ss_pred ccccee-echhhhhhcCCcceeeccCCcCc-cCC
Confidence 999998 89999999999999999999765 444
No 448
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.28 E-value=6.9e-13 Score=131.19 Aligned_cols=144 Identities=27% Similarity=0.332 Sum_probs=126.8
Q ss_pred eEEcCC----------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecC-CCccc
Q 007073 70 VICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN-NRLVG 138 (619)
Q Consensus 70 v~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~ 138 (619)
|.|++. ...+.|+|..|+|+.+.|..|..+++|+.||||+|+|+.+-|++|..|.+|..|-+-+ |+|+.
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~ 130 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD 130 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh
Confidence 888752 3789999999999988889999999999999999999988999999999998876655 99996
Q ss_pred cCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCc----cccccCccccCCCCCCCCCCCCCC
Q 007073 139 KIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV----HLFQIPKYNFTGNNLNCGKTLPHS 214 (619)
Q Consensus 139 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~----~l~~l~~l~~~~n~~~c~~~~~~~ 214 (619)
...+.|++|.+|+.|.+.-|++.-...+.|..|++|..|.+..|.+. .|+. .+..++.+.+.-|++.|+|.++-.
T Consensus 131 l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wl 209 (498)
T KOG4237|consen 131 LPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWL 209 (498)
T ss_pred hhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchh
Confidence 55678999999999999999999777889999999999999999998 7774 345677788999999999987643
No 449
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=6.3e-12 Score=132.11 Aligned_cols=247 Identities=19% Similarity=0.165 Sum_probs=175.1
Q ss_pred CCcccCcccc--CCCceEEEEEe---CCCcEEEEEEeccCCC-cchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcce
Q 007073 295 NFSEKNVLGQ--GGFGKVYRGVL---ADGTKVAVKRLTDFES-PGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 295 ~~~~~~~lg~--G~fg~Vy~~~~---~~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 367 (619)
.|...+.+|. |.+|.||.+.. .++..+|+|+-+..-+ +.....=.+|+...+.++ |+|.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3455678999 99999999986 4688999997543222 222223345666666665 999999888888888888
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHH----HHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEccc
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR----GLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDF 442 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~----~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Df 442 (619)
+-.|++. .++..+.+... ..++....+.+..+..+ |+.++|.. +++|-|+||.||+...+ ...+++||
T Consensus 195 iqtE~~~-~sl~~~~~~~~---~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPC---NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeecccc-chhHHhhhccc---ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 8888876 56766665532 22555666777777777 99999999 99999999999999999 88999999
Q ss_pred ccceeeccCCcce----eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 443 GLAKLVDVRKTNV----TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 443 Gla~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
|+...+....-.. .....|...|++||..+ +-++.++|+|++|.+..+..++.......... .|..
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~--------~W~~- 337 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS--------SWSQ- 337 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC--------Cccc-
Confidence 9998886544221 12235788999999874 56789999999999999999987765432111 0100
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV 567 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 567 (619)
..... +...+.......+...+.++++.+|-.|++.+.+.
T Consensus 338 ~r~~~---------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 338 LRQGY---------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred ccccc---------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 00000 11111222223455588899999999999977765
No 450
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.27 E-value=1.3e-10 Score=123.42 Aligned_cols=233 Identities=18% Similarity=0.180 Sum_probs=149.9
Q ss_pred eCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCH
Q 007073 315 LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDW 394 (619)
Q Consensus 315 ~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~ 394 (619)
..++.+|.|...+.... .......+-++-++.++||||+++++...+....|+|+|-+.- |..++.+ +.-
T Consensus 34 k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~-------l~~ 103 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKE-------LGK 103 (690)
T ss_pred eccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHH-------hHH
Confidence 44788888888764333 3345566778889999999999999999999999999998753 4444544 223
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeeccccccccccccccCC
Q 007073 395 VTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG 474 (619)
Q Consensus 395 ~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 474 (619)
....-.+.||+.||.|||+.| +++|++|.-..|+++..|+.||++|-++.....-.. ......---.|..|+.+...
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCcc
Confidence 445556889999999999776 899999999999999999999999998764322111 01111112246667655332
Q ss_pred CCCcchhhHHHHHHHHHHHhCCCCCCCCccc-cccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhcc
Q 007073 475 KSSERTDVFGYGIMLLELVTGQRAIDFSRLE-EEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCT 553 (619)
Q Consensus 475 ~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl 553 (619)
. -..|.|.||++++|++.|..+-...... ............. .+... ....+ ...+++..|.
T Consensus 181 ~--~s~D~~~Lg~li~el~ng~~~~~~~~~~~~~ipk~~~~~~~k--------~~~~~------~~~r~-n~~~~~~~~~ 243 (690)
T KOG1243|consen 181 E--WSIDSWGLGCLIEELFNGSLLTKTDLSNTGKIPKALIELYCK--------KLGAT------ELKRP-NKLRFILECR 243 (690)
T ss_pred c--cchhhhhHHHHHHHHhCcccCcchhhhccCccchhHHHHHHH--------Hhccc------ccccc-chhhHHHHHH
Confidence 2 3459999999999999994332111100 0000011111100 00000 00001 1456666777
Q ss_pred CCCCCCCCCHHHHHHHHhcCCccc
Q 007073 554 QASPEDRPAMSEVVRMLEGEGLAE 577 (619)
Q Consensus 554 ~~dP~~RPs~~evl~~L~~~~~~~ 577 (619)
..-+--|=.+-+++.+|+...+.+
T Consensus 244 ~~~gff~n~fvd~~~fLeel~lks 267 (690)
T KOG1243|consen 244 LLGGFFRNDFVDTLLFLEELRLKS 267 (690)
T ss_pred hccccccchHHHHHHHHHhcccCc
Confidence 777777777888888888765543
No 451
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.26 E-value=2.6e-13 Score=134.11 Aligned_cols=187 Identities=22% Similarity=0.309 Sum_probs=146.7
Q ss_pred ccccccchhcccchhHHHHHHHHHhcCCCCCCCCCCCCCC-----------CCCCCcceeEEc------CCCCeEEEEeC
Q 007073 22 PDLHNGWLTFLCSLSGDALFALRTSLRVPNNQLRDWNQNQ-----------VNPCTWSNVICD------NSNNVASVTLS 84 (619)
Q Consensus 22 ~~~~~~~~~~~~~~~~~al~~~k~~l~~~~~~l~~w~~~~-----------~~~c~w~gv~c~------~~~~l~~L~L~ 84 (619)
.|+++|++++|-++.+..|-++-+.+.+.+|.+++..... .++| -+.|- ...++..|.|-
T Consensus 96 LdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan---~i~Cir~~al~dL~~l~lLsly 172 (498)
T KOG4237|consen 96 LDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNAN---HINCIRQDALRDLPSLSLLSLY 172 (498)
T ss_pred ecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChh---hhcchhHHHHHHhhhcchhccc
Confidence 5788999999999988888888777777777776642211 1222 12332 24577788889
Q ss_pred CCCccccCCccccCCCCCCEEEccCCCCC--------------------C------------------------------
Q 007073 85 SMNFSGTLSPRIGVLRTLSTLTLKGNGIT--------------------G------------------------------ 114 (619)
Q Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--------------------~------------------------------ 114 (619)
+|.+..+--..|..+.+++.+.+..|.+- |
T Consensus 173 Dn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~ 252 (498)
T KOG4237|consen 173 DNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLP 252 (498)
T ss_pred chhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHH
Confidence 99998554558888999999988888822 0
Q ss_pred -----------CCc-ccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCC
Q 007073 115 -----------EIP-EELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSN 182 (619)
Q Consensus 115 -----------~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 182 (619)
.-| ..|.+|++|+.|+|++|+|+++-+..|..+..|++|+|..|+|...-...|.++..|+.|+|.+|
T Consensus 253 s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N 332 (498)
T KOG4237|consen 253 SRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDN 332 (498)
T ss_pred HhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCC
Confidence 011 23778999999999999999988999999999999999999998555667889999999999999
Q ss_pred cccccCCccc---cccCccccCCCCCCCCCCC
Q 007073 183 NLSGQIPVHL---FQIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 183 ~l~~~~p~~l---~~l~~l~~~~n~~~c~~~~ 211 (619)
+|+..-|..| ..+..|++.+|||+|.|.+
T Consensus 333 ~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l 364 (498)
T KOG4237|consen 333 QITTVAPGAFQTLFSLSTLNLLSNPFNCNCRL 364 (498)
T ss_pred eeEEEecccccccceeeeeehccCcccCccch
Confidence 9997778655 4678899999999999975
No 452
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.24 E-value=6.8e-13 Score=131.36 Aligned_cols=127 Identities=30% Similarity=0.475 Sum_probs=108.5
Q ss_pred CeEEEEeCCCCccc-----------------------cCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecC
Q 007073 77 NVASVTLSSMNFSG-----------------------TLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN 133 (619)
Q Consensus 77 ~l~~L~L~~n~l~~-----------------------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (619)
-++.++++.|++.. .+|..++.+++|..|+|++|-+. .+|.+++.+..|+.||||.
T Consensus 389 ~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~ 467 (565)
T KOG0472|consen 389 IVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSF 467 (565)
T ss_pred ceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccc
Confidence 37777887776552 44555677899999999999998 8999999999999999999
Q ss_pred CCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCccccccC---ccccCCCCCC
Q 007073 134 NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIP---KYNFTGNNLN 206 (619)
Q Consensus 134 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~---~l~~~~n~~~ 206 (619)
|+|. .+|..+..+..|+.+-.++|++....|+.+.+|.+|..|||.+|.+. .||..+++++ .|.+.|||+.
T Consensus 468 NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 468 NRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 9999 89999988889999999999998555666999999999999999999 8998877655 5789999985
No 453
>PLN03150 hypothetical protein; Provisional
Probab=99.22 E-value=5.2e-12 Score=140.81 Aligned_cols=95 Identities=41% Similarity=0.714 Sum_probs=91.6
Q ss_pred CCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCC
Q 007073 101 TLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLD 180 (619)
Q Consensus 101 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 180 (619)
.++.|+|++|.++|.+|..+++|++|+.|+|++|+|+|.+|..++++++|+.|+|++|+++|.+|+.+.+|++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCcccccc
Q 007073 181 SNNLSGQIPVHLFQI 195 (619)
Q Consensus 181 ~N~l~~~~p~~l~~l 195 (619)
+|+++|.+|..+..+
T Consensus 499 ~N~l~g~iP~~l~~~ 513 (623)
T PLN03150 499 GNSLSGRVPAALGGR 513 (623)
T ss_pred CCcccccCChHHhhc
Confidence 999999999988754
No 454
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.22 E-value=1.1e-12 Score=142.29 Aligned_cols=174 Identities=26% Similarity=0.361 Sum_probs=132.1
Q ss_pred hccCccccccchhcccchhHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCcceeEEcCCCCeEEEEeCCCCccccCCcccc
Q 007073 18 DNFDPDLHNGWLTFLCSLSGDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGTLSPRIG 97 (619)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~al~~~k~~l~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~ 97 (619)
.+-+.|+..|.+..-.......+..--..++.+.+.+.+. ||.=+ .....|+.|.|.+|.++...=+.+.
T Consensus 311 sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~l------p~~~e----~~~~~Lq~LylanN~Ltd~c~p~l~ 380 (1081)
T KOG0618|consen 311 SLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTL------PSYEE----NNHAALQELYLANNHLTDSCFPVLV 380 (1081)
T ss_pred eeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccccc------ccccc----hhhHHHHHHHHhcCcccccchhhhc
Confidence 3445566666666555543333333122233333333322 22111 1234799999999999988778899
Q ss_pred CCCCCCEEEccCCCCCCCCc-ccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCcccccccccc
Q 007073 98 VLRTLSTLTLKGNGITGEIP-EELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLIS 176 (619)
Q Consensus 98 ~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 176 (619)
++++|+.|+|++|+|. .+| ..+.++..|+.|+||+|+++ .+|..+.+++.|++|...+|++. ..| .+..++.|+.
T Consensus 381 ~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~ 456 (1081)
T KOG0618|consen 381 NFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKV 456 (1081)
T ss_pred cccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceE
Confidence 9999999999999999 565 46889999999999999999 89999999999999999999999 888 8899999999
Q ss_pred ccCCCCcccc-cCCccc--cccCccccCCCCC
Q 007073 177 IQLDSNNLSG-QIPVHL--FQIPKYNFTGNNL 205 (619)
Q Consensus 177 L~l~~N~l~~-~~p~~l--~~l~~l~~~~n~~ 205 (619)
+|++.|+|+- .+|..+ .+|+.|+++||.+
T Consensus 457 lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 457 LDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred EecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 9999999973 345443 5789999999996
No 455
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=2.1e-11 Score=128.20 Aligned_cols=247 Identities=19% Similarity=0.177 Sum_probs=173.8
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC--CCcEEEEEEeccCCCcc-hHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcc
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA--DGTKVAVKRLTDFESPG-GDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~--~g~~vAvK~l~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 366 (619)
....+|..+..||.|.|+.|+....+ ++..|++|.+.+..... .+..-..|+.+...+ .|.++++....+......
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 34567888899999999999998854 68899999886543222 222334566666655 489999988877777778
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEcccccc
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLA 445 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla 445 (619)
++--||++++++.....- ...++...++++..|++.++.++|++ .++|+|+||+||++..+ +..+++|||.+
T Consensus 342 ~ip~e~~~~~s~~l~~~~----~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVT----SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cCchhhhcCcchhhhhHH----HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccc
Confidence 888999999988776622 22367778889999999999999999 99999999999999886 78899999998
Q ss_pred eeeccCCcceeeecccccccc--ccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 446 KLVDVRKTNVTTQVRGTMGHI--APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
+.+... .....++-+++ +|+......+-.+.|+||||.-+.|..+|..--. ... .|
T Consensus 415 t~~~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~-~~~---------~~-------- 472 (524)
T KOG0601|consen 415 TRLAFS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE-SGV---------QS-------- 472 (524)
T ss_pred ccccee----cccccccccccccchhhccccccccccccccccccccccccCcccCc-ccc---------cc--------
Confidence 743211 11112333444 5555566778899999999999999999864321 100 00
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 007073 524 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 570 (619)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 570 (619)
..+... .... .+.....+..+...+...++..||.+.+.....
T Consensus 473 --~~i~~~-~~p~-~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 473 --LTIRSG-DTPN-LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred --eeeecc-cccC-CCchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 000000 0011 112225667778888899999999988876543
No 456
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.17 E-value=3.6e-10 Score=109.93 Aligned_cols=142 Identities=21% Similarity=0.272 Sum_probs=108.7
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCC--CccceeeeeeCCC---cceeEecccc
Q 007073 300 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR--NLLRLIGFCTTPT---ERLLVYPFMQ 374 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~~~~~~---~~~lv~e~~~ 374 (619)
+.|+.|.++.||++...+|+.+++|.............+..|+++++.+.+. ++.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 5689999999999998777899999875433222356788999999998764 4566777766542 5689999999
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC--------------------------------------- 415 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--------------------------------------- 415 (619)
+.++...+.. ..++...+..++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9888775531 12566677778888888888888521
Q ss_pred --------------CCCeEecCCCCCcEEeCC--CCcEEEcccccce
Q 007073 416 --------------NPKIIHRDVKAANVLLDE--DFEAVVGDFGLAK 446 (619)
Q Consensus 416 --------------~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~ 446 (619)
...++|+|++|.||+++. ++.+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 245799999999999998 6678999999876
No 457
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.17 E-value=6e-10 Score=104.58 Aligned_cols=137 Identities=15% Similarity=0.141 Sum_probs=97.4
Q ss_pred CccccCCCceEEEEEeCC-------CcEEEEEEeccCC---------------------CcchHHHHH----HHHHHHHH
Q 007073 300 NVLGQGGFGKVYRGVLAD-------GTKVAVKRLTDFE---------------------SPGGDAAFQ----REVEMISV 347 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~-------g~~vAvK~l~~~~---------------------~~~~~~~~~----~E~~~l~~ 347 (619)
..||.|--+.||.|...+ +..+|||..+-.. .....+.+. +|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 478999999999998643 4799999763200 011123333 79999988
Q ss_pred ccC--CCccceeeeeeCCCcceeEecccccchhhh-hhcccCCCCCCcCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecC
Q 007073 348 AVH--RNLLRLIGFCTTPTERLLVYPFMQNLSVAY-RLREIKPGEPVLDWVTRKRVALGAARGLEYL-HEHCNPKIIHRD 423 (619)
Q Consensus 348 l~H--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~ivH~D 423 (619)
+.. -++..++++ ...++||||+.+..+.. .+.+ ..++......+..+++.+|..+ |+. +++|||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 864 344555553 56889999998653321 2222 1234445567789999999999 777 999999
Q ss_pred CCCCcEEeCCCCcEEEcccccceeec
Q 007073 424 VKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 424 lkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+++.||++++ +.++|+|||.+....
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeCC
Confidence 9999999974 679999999987543
No 458
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.15 E-value=1.4e-11 Score=113.30 Aligned_cols=117 Identities=31% Similarity=0.493 Sum_probs=45.7
Q ss_pred CeEEEEeCCCCccccCCcccc-CCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcc-cccccchhhh
Q 007073 77 NVASVTLSSMNFSGTLSPRIG-VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSL-GNLKKLQFLT 154 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ 154 (619)
++++|+|++|.|+. +. .++ .+.+|+.|+|++|.|+ .++. +..+++|+.|+|++|+|+ .++..+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~-~l~~-l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQIT-KLEG-LPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---TT-----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-cc-chhhhhcCCCEEECCCCCCc-cccC-ccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 67889999999984 33 455 5889999999999998 5654 888999999999999999 565545 4689999999
Q ss_pred ccCCcCCCCCC--CccccccccccccCCCCcccccCCc----cccccCcccc
Q 007073 155 LSQNNFSGTIP--DSLTTLSSLISIQLDSNNLSGQIPV----HLFQIPKYNF 200 (619)
Q Consensus 155 l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~p~----~l~~l~~l~~ 200 (619)
|++|+|. .+. ..+..+++|+.|+|.+|+++ ..+. -+..+|.|..
T Consensus 95 L~~N~I~-~l~~l~~L~~l~~L~~L~L~~NPv~-~~~~YR~~vi~~lP~Lk~ 144 (175)
T PF14580_consen 95 LSNNKIS-DLNELEPLSSLPKLRVLSLEGNPVC-EKKNYRLFVIYKLPSLKV 144 (175)
T ss_dssp -TTS----SCCCCGGGGG-TT--EEE-TT-GGG-GSTTHHHHHHHH-TT-SE
T ss_pred CcCCcCC-ChHHhHHHHcCCCcceeeccCCccc-chhhHHHHHHHHcChhhe
Confidence 9999997 332 34667888999999999988 3442 2334555543
No 459
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.07 E-value=2e-09 Score=97.43 Aligned_cols=132 Identities=22% Similarity=0.305 Sum_probs=100.4
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEe-ccCCC-cch-----HHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 300 NVLGQGGFGKVYRGVLADGTKVAVKRL-TDFES-PGG-----DAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~~vAvK~l-~~~~~-~~~-----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
..+++|+-+.+|.+.+. |.++++|.- .+... +.- ...-.+|++++.+++--.|--..=+..++....++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 46899999999999885 445666643 22211 211 23456799999988766665555566778888999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
++|-.|.+.+... ...++..+-+.+.-||.. +|+|+|+.++||++..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9998888888763 245666777788889999 999999999999998775 99999999873
No 460
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.03 E-value=1.6e-09 Score=97.47 Aligned_cols=144 Identities=19% Similarity=0.226 Sum_probs=105.7
Q ss_pred ccCccccCCCceEEEEEeCCCcEEEEEEec-cCC-Ccc-----hHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 298 EKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFE-SPG-----GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~-~~~-~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
...+|.+|+-+.|+++.+. |+...||.-. +.. .+. ......+|++.+.+++--.|.-..=++.+.....++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4578999999999999994 7887777432 211 111 2345678999999887666655555666777788999
Q ss_pred ccccc-chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---cEEEcccccce
Q 007073 371 PFMQN-LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF---EAVVGDFGLAK 446 (619)
Q Consensus 371 e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfGla~ 446 (619)
||+++ .++.+++....... ..-.....++..|-+.+.-||.. +|+||||.++||++..++ .+.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~~~--~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE--SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHccCc--ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99987 47777776644322 22222367888999999999999 999999999999996543 45899999986
Q ss_pred e
Q 007073 447 L 447 (619)
Q Consensus 447 ~ 447 (619)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 3
No 461
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.03 E-value=6e-11 Score=109.10 Aligned_cols=115 Identities=31% Similarity=0.497 Sum_probs=38.5
Q ss_pred eCCCCccccCCccccCCCCCCEEEccCCCCCCCCccccc-ccccCcEeeecCCCccccCCCcccccccchhhhccCCcCC
Q 007073 83 LSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELG-NLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFS 161 (619)
Q Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 161 (619)
|+.+.|. .++ .+.+..++++|+|++|+|+ .+.. ++ .+++|+.|||++|.|+ .++ .+..+++|++|++++|+|+
T Consensus 4 lt~~~i~-~~~-~~~n~~~~~~L~L~~n~I~-~Ie~-L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 4 LTANMIE-QIA-QYNNPVKLRELNLRGNQIS-TIEN-LGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp -----------------------------------S---TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---
T ss_pred ccccccc-ccc-ccccccccccccccccccc-cccc-hhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC
Confidence 4455555 333 3456668999999999999 6654 66 6899999999999999 565 5889999999999999999
Q ss_pred CCCCCcc-ccccccccccCCCCcccccCC-----ccccccCccccCCCCC
Q 007073 162 GTIPDSL-TTLSSLISIQLDSNNLSGQIP-----VHLFQIPKYNFTGNNL 205 (619)
Q Consensus 162 ~~~p~~~-~~l~~L~~L~l~~N~l~~~~p-----~~l~~l~~l~~~~n~~ 205 (619)
.+++.+ ..+++|+.|+|++|+|. .+- ..+.++..|++.|||.
T Consensus 78 -~i~~~l~~~lp~L~~L~L~~N~I~-~l~~l~~L~~l~~L~~L~L~~NPv 125 (175)
T PF14580_consen 78 -SISEGLDKNLPNLQELYLSNNKIS-DLNELEPLSSLPKLRVLSLEGNPV 125 (175)
T ss_dssp -S-CHHHHHH-TT--EEE-TTS----SCCCCGGGGG-TT--EEE-TT-GG
T ss_pred -ccccchHHhCCcCCEEECcCCcCC-ChHHhHHHHcCCCcceeeccCCcc
Confidence 665555 46899999999999998 333 2345666788999997
No 462
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.99 E-value=1.3e-08 Score=104.97 Aligned_cols=220 Identities=14% Similarity=0.152 Sum_probs=152.0
Q ss_pred CCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC----CCcceeEeccccc-chhh
Q 007073 306 GFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT----PTERLLVYPFMQN-LSVA 379 (619)
Q Consensus 306 ~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~ 379 (619)
...+.|++.. .||..|+.||++...... ...-..-+++++++.|+|+|++.+++.+ +...++||+|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~-~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQS-TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccC-cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 4468899985 489999999995433221 1112345788999999999999998863 3457899999986 3555
Q ss_pred hhhcccC-----------CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 380 YRLREIK-----------PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 380 ~~l~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
+.-.... ..+...+....+.++.|++.||.++|+. |...+-|.+.+|+++.+.+++|+..|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 4432211 1234467788999999999999999999 9999999999999999999999999988777
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
..++.. -+ +--.+-|.=.||.+++.|.||..---... ......+.
T Consensus 444 ~~d~~~---------------~l---e~~Qq~D~~~lG~ll~aLAt~~~ns~~~d---------------~~~~s~~~-- 488 (655)
T KOG3741|consen 444 QEDPTE---------------PL---ESQQQNDLRDLGLLLLALATGTENSNRTD---------------STQSSHLT-- 488 (655)
T ss_pred cCCCCc---------------ch---hHHhhhhHHHHHHHHHHHhhccccccccc---------------chHHHHHH--
Confidence 654411 11 11246788999999999999964311000 00000000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
......+.++.+++.-....++++ -+..+++.++-+
T Consensus 489 -------~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~~~ 524 (655)
T KOG3741|consen 489 -------RITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMIGS 524 (655)
T ss_pred -------HhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHHHH
Confidence 112344456677777777778876 567777766543
No 463
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.93 E-value=9.5e-11 Score=121.27 Aligned_cols=125 Identities=30% Similarity=0.520 Sum_probs=101.1
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
...++.|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++.+.+|+.|.
T Consensus 120 L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~ 195 (722)
T KOG0532|consen 120 LEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLN 195 (722)
T ss_pred hhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHH
Confidence 347888888888888 7777777765 788888888888 88888888888888888888888 7888888888888888
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCcccccc---CccccCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQI---PKYNFTGNNLN 206 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l---~~l~~~~n~~~ 206 (619)
+..|++. .+|..+..| .|..||++.|+++ .||-.|.+| ..|.|.+||..
T Consensus 196 vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 196 VRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred Hhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 8888888 778877754 4788888888888 788766554 45667788764
No 464
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.93 E-value=4.9e-10 Score=84.76 Aligned_cols=57 Identities=40% Similarity=0.632 Sum_probs=21.9
Q ss_pred CCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCC
Q 007073 102 LSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQN 158 (619)
Q Consensus 102 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 158 (619)
|++|+|++|+|+...+..|.++++|++|+|++|+|+...|..|.++++|+.|++++|
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 333444444443222233333444444444444443333333344444444444433
No 465
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.92 E-value=9.8e-10 Score=122.89 Aligned_cols=115 Identities=26% Similarity=0.361 Sum_probs=76.9
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+|+.|+|++|+|++ +|.. .++|+.|++++|+|+ .+|.. .++|+.|+|++|+|+ .+|... ++|+.|+++
T Consensus 343 ~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS 410 (788)
T PRK15387 343 GLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLT-SLPVLP---SELKELMVS 410 (788)
T ss_pred ccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccccceEEecCCccc-CCCCcc---cCCCEEEcc
Confidence 45555555555552 3321 234445555555555 34432 246888888888888 466543 578889999
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCG 208 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c~ 208 (619)
+|+|+ .+|... .+|+.|++++|+|+ .+|..+. ++..+++++|++...
T Consensus 411 ~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 411 GNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSER 460 (788)
T ss_pred CCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCch
Confidence 99998 577643 47889999999999 8997665 455688999998643
No 466
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.92 E-value=1.8e-09 Score=121.31 Aligned_cols=95 Identities=24% Similarity=0.469 Sum_probs=40.5
Q ss_pred CCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCC
Q 007073 101 TLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLD 180 (619)
Q Consensus 101 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 180 (619)
+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|+++
T Consensus 263 ~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls 333 (754)
T PRK15370 263 ALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLT-ALPETLP--PGLKTLEAG 333 (754)
T ss_pred CCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCccc-cCCcccc--ccceecccc
Confidence 4444444444444 3443332 24455555555444 2333322 24444444444444 3333221 344444444
Q ss_pred CCcccccCCccc-cccCccccCCCCC
Q 007073 181 SNNLSGQIPVHL-FQIPKYNFTGNNL 205 (619)
Q Consensus 181 ~N~l~~~~p~~l-~~l~~l~~~~n~~ 205 (619)
+|.++ .+|..+ .++..|++++|.+
T Consensus 334 ~N~Lt-~LP~~l~~sL~~L~Ls~N~L 358 (754)
T PRK15370 334 ENALT-SLPASLPPELQVLDVSKNQI 358 (754)
T ss_pred CCccc-cCChhhcCcccEEECCCCCC
Confidence 44444 244322 2344444444443
No 467
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.91 E-value=1.2e-10 Score=111.53 Aligned_cols=127 Identities=27% Similarity=0.391 Sum_probs=101.5
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
..|++||||+|.|+ .+..+..-+|.++.|++|+|.|. .+-. +..|++|+.||||+|.++ .+.+.=.+|.|.++|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 47899999999999 67778888999999999999998 5554 889999999999999999 66666677888999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCC--ccccccC---ccccCCCCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP--VHLFQIP---KYNFTGNNLNCGK 209 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~l~~l~---~l~~~~n~~~c~~ 209 (619)
+.|.|. .+ +.+..|-+|..||+++|+|. .+. ..+++++ .+.+.+||..-..
T Consensus 360 a~N~iE-~L-SGL~KLYSLvnLDl~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 360 AQNKIE-TL-SGLRKLYSLVNLDLSSNQIE-ELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhhHh-hh-hhhHhhhhheeccccccchh-hHHHhcccccccHHHHHhhcCCCccccc
Confidence 999987 33 45677788999999999997 333 3455554 4567788875433
No 468
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.90 E-value=3.5e-10 Score=125.03 Aligned_cols=250 Identities=17% Similarity=0.190 Sum_probs=165.7
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..+.+.+.+-+-+|+++.++.+.-. .|...+.|...... .....+....+-.++-..+||-++...--+.......+
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4456677778889999999888743 35445555433211 01112222333333333455666655444445567889
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
+++|..++++...++.... .+..-.......+..+++|||.. .+.|+|++|.|.++..+++.+++|||.....
T Consensus 882 ~~~~~~~~~~~Skl~~~~~----~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGC----LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhHHhccCCchhhhhcCCC----cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 9999999999999887542 33333344556678899999998 7999999999999999999999999844322
Q ss_pred ccC------------------------------CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCC
Q 007073 449 DVR------------------------------KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRA 498 (619)
Q Consensus 449 ~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p 498 (619)
... +........||+.|.+||...+......+|+|+.|++++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 100 00011234689999999999999999999999999999999999999
Q ss_pred CCCCccccccchhHHHHHHHHhhhcccchhcccccc-CCCCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 007073 499 IDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLN-KNYNIQEVETMIQVALLCTQASPEDRPAMSE 565 (619)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 565 (619)
|........ ...+...... ............+++...+..+|.+|-.+.-
T Consensus 1035 ~na~tpq~~-----------------f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~ 1085 (1205)
T KOG0606|consen 1035 FNAETPQQI-----------------FENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKG 1085 (1205)
T ss_pred CCCcchhhh-----------------hhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCccc
Confidence 864332110 0111111111 1123344456778888888999999977663
No 469
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.88 E-value=2.2e-09 Score=120.70 Aligned_cols=117 Identities=26% Similarity=0.475 Sum_probs=68.6
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+++.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|+|
T Consensus 199 ~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~L 269 (754)
T PRK15370 199 EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDL 269 (754)
T ss_pred cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEEC
Confidence 36778888888877 4555443 47777777777777 5565443 35666666666666 5555543 35666666
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCcccc-ccCccccCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF-QIPKYNFTGNNL 205 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~-~l~~l~~~~n~~ 205 (619)
++|+|+ .+|..+. ++|+.|++++|+|+ .+|..+. ++..|++++|.+
T Consensus 270 s~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp~sL~~L~Ls~N~L 316 (754)
T PRK15370 270 FHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLPSGITHLNVQSNSL 316 (754)
T ss_pred cCCccC-ccccccC--CCCcEEECCCCccc-cCcccchhhHHHHHhcCCcc
Confidence 666666 4555443 35666666666665 3443322 344445555444
No 470
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.87 E-value=1.9e-09 Score=81.53 Aligned_cols=61 Identities=34% Similarity=0.466 Sum_probs=56.9
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRL 136 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 136 (619)
++|+.|+|++|+|+.+.+..|..+++|++|+|++|+|+...|..|.++++|++|+|++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3789999999999988888999999999999999999977778999999999999999986
No 471
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.87 E-value=1.3e-07 Score=95.35 Aligned_cols=289 Identities=16% Similarity=0.131 Sum_probs=171.3
Q ss_pred cccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeee-------eCCCccee
Q 007073 297 SEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFC-------TTPTERLL 368 (619)
Q Consensus 297 ~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~-------~~~~~~~l 368 (619)
.....||+|+.+.+|-.-.- +.. +-|+.+..... .. .+.+++|... .||-+-.-+.+- .......+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~d~-VAKIYh~Pppa-~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-RDQ-VAKIYHAPPPA-AQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchh-hch-hheeecCCCch-HH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 34678999999999965421 222 33655532211 11 2234444443 466543312111 11122456
Q ss_pred Eecccccch-hhhhhc--ccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 369 VYPFMQNLS-VAYRLR--EIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 369 v~e~~~~gs-L~~~l~--~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.|..+.+-- ...+.. .....-....|+-.++++..+|.+.+.||+. |.+-||+.++|+|+.+++.+.|.|=..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccce
Confidence 666665431 111111 1112234578999999999999999999999 9999999999999999999999886543
Q ss_pred eeeccCCcceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhC-CCCCCCCccccccchhHHHHHHHH
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTG-QRAIDFSRLEEEDDVLLLDHVKKL 519 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~ 519 (619)
... .........+|...|.+||.-. +-.-+...|-|.+||++++++.| ++||...........-.- ..
T Consensus 165 qi~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E----~~ 238 (637)
T COG4248 165 QIN--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE----TD 238 (637)
T ss_pred eec--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch----hh
Confidence 322 2233445667899999999764 33457789999999999999987 999975332111110000 00
Q ss_pred hhhcccchhcc------ccccCCCCHHHHHHHHHHHHhccCCC--CCCCCCHHHHHHHHhcCCcccchhhhhhhhhhhHH
Q 007073 520 EREKRLDAIVD------RNLNKNYNIQEVETMIQVALLCTQAS--PEDRPAMSEVVRMLEGEGLAERWEEWQHVEVTRRQ 591 (619)
Q Consensus 520 ~~~~~~~~~~~------~~l~~~~~~~~~~~l~~l~~~Cl~~d--P~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~ 591 (619)
...+......+ +........-.+.++..+..+|+... +.-|||++..+..|..... +.....+....
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~-----~L~~C~v~a~H 313 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ-----QLKKCTVSAMH 313 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH-----hhhhhhhcccc
Confidence 00011100000 00011112334467788888999764 5689999999888866321 22333344445
Q ss_pred HHHhhccccCcccC
Q 007073 592 EYERLQRRFDWGED 605 (619)
Q Consensus 592 ~~~~~~~~~~w~~~ 605 (619)
.|...--++.|++-
T Consensus 314 ~y~~hl~~CPwCa~ 327 (637)
T COG4248 314 VYPVHLTDCPWCAL 327 (637)
T ss_pred cccCCCCCCchhhh
Confidence 56666666788764
No 472
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.87 E-value=2.6e-08 Score=98.92 Aligned_cols=141 Identities=16% Similarity=0.073 Sum_probs=100.6
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEeccCCCcc----------hHHHHHHHHHHHHHccCCCc--cceeeeeeC-----
Q 007073 300 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG----------GDAAFQREVEMISVAVHRNL--LRLIGFCTT----- 362 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~----------~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~----- 362 (619)
+.+-......|++..+ +|+.|.||+........ ....+.+|...+.++...+| ..++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4455445556778777 57899999774322111 11247789999888864443 344555532
Q ss_pred CCcceeEecccccc-hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-------C
Q 007073 363 PTERLLVYPFMQNL-SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-------D 434 (619)
Q Consensus 363 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------~ 434 (619)
....++|+|++++. +|.+++..... ...+...+..++.+++..+.-||+. ||+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT--NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 23468999999986 78888753221 2245566778999999999999999 9999999999999975 4
Q ss_pred CcEEEcccccce
Q 007073 435 FEAVVGDFGLAK 446 (619)
Q Consensus 435 ~~~kl~DfGla~ 446 (619)
..+.++||+.+.
T Consensus 182 ~~~~LIDl~r~~ 193 (268)
T PRK15123 182 LKLSVIDLHRAQ 193 (268)
T ss_pred ceEEEEECCccc
Confidence 789999999885
No 473
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.85 E-value=3.3e-08 Score=92.52 Aligned_cols=126 Identities=20% Similarity=0.289 Sum_probs=82.1
Q ss_pred eEEEEEeCCCcEEEEEEeccCC--------------C------cc-----hHHHHHHHHHHHHHccCCC--ccceeeeee
Q 007073 309 KVYRGVLADGTKVAVKRLTDFE--------------S------PG-----GDAAFQREVEMISVAVHRN--LLRLIGFCT 361 (619)
Q Consensus 309 ~Vy~~~~~~g~~vAvK~l~~~~--------------~------~~-----~~~~~~~E~~~l~~l~H~n--iv~l~~~~~ 361 (619)
.||.|...+|..+|||..+... . .. ......+|.+.|.++..-+ +.+++++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 4899999899999999764210 0 00 1234567999999998654 4555544
Q ss_pred CCCcceeEecccc--cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHH-HHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 362 TPTERLLVYPFMQ--NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEY-LHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 362 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~-LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
....+||||++ |..+.. +.... ++......++.++...+.. +|.. ||+|||+.+.||+++++ .+.
T Consensus 79 --~~~~ivME~I~~~G~~~~~-l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPR-LKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp --ETTEEEEE--EETTEEGGC-HHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred --eCCEEEEEecCCCccchhh-HHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 25689999998 545544 33211 1123445677788886665 4677 99999999999999988 999
Q ss_pred Ecccccceee
Q 007073 439 VGDFGLAKLV 448 (619)
Q Consensus 439 l~DfGla~~~ 448 (619)
++|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999988754
No 474
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.82 E-value=6.4e-09 Score=116.44 Aligned_cols=112 Identities=22% Similarity=0.327 Sum_probs=52.5
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+++.|+|++|+|+. +|. .+++|++|+|++|+|+ .+|.. .++|+.|+|++|.|+ .+|..+ ++|+.|+|+
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~Ls 290 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWIF 290 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhch---hhcCEEECc
Confidence 34555555555552 332 1345555555555555 33431 234455555555554 333322 334445555
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccccCCccccccCccccCCCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNL 205 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~~ 205 (619)
+|+|+ .+|.. +++|+.|+|++|+|+ .+|....++..|.+.+|.+
T Consensus 291 ~N~Lt-~LP~~---p~~L~~LdLS~N~L~-~Lp~lp~~L~~L~Ls~N~L 334 (788)
T PRK15387 291 GNQLT-SLPVL---PPGLQELSVSDNQLA-SLPALPSELCKLWAYNNQL 334 (788)
T ss_pred CCccc-ccccc---ccccceeECCCCccc-cCCCCcccccccccccCcc
Confidence 55555 34432 245555566666555 3444334444444444443
No 475
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.82 E-value=4.3e-10 Score=122.60 Aligned_cols=121 Identities=26% Similarity=0.398 Sum_probs=100.2
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|.|.......+.++..|+.|+||+|+|+ .+|+.+.++..|++|...+|+|. ..| .+.++++|+.+|
T Consensus 382 ~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lD 458 (1081)
T KOG0618|consen 382 FKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLD 458 (1081)
T ss_pred ccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEe
Confidence 358999999999999666677889999999999999999 99999999999999999999999 888 999999999999
Q ss_pred ccCCcCCCC-CCCccccccccccccCCCCcccccCCccccccCccc
Q 007073 155 LSQNNFSGT-IPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYN 199 (619)
Q Consensus 155 l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~ 199 (619)
+|.|+|+.. +|..... ++|++|||++|.-...--..|..+..+.
T Consensus 459 lS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l~ 503 (1081)
T KOG0618|consen 459 LSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSLS 503 (1081)
T ss_pred cccchhhhhhhhhhCCC-cccceeeccCCcccccchhhhHHhhhhh
Confidence 999999843 3544433 8999999999985322223344444333
No 476
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.80 E-value=3.2e-10 Score=117.38 Aligned_cols=124 Identities=28% Similarity=0.495 Sum_probs=93.1
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
.|..+.|.+|.+. ++|..+++|..|++|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+..|..||.+
T Consensus 99 ~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s 174 (722)
T KOG0532|consen 99 SLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVS 174 (722)
T ss_pred HHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhh
Confidence 3555556666666 66777777777888888888877 7777676654 777778888877 778788877888888888
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccccCCcccccc--CccccCCCCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQI--PKYNFTGNNLN 206 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l--~~l~~~~n~~~ 206 (619)
.|.+. .+|..+..+.+|+.|.+..|++. .+|.++..| .+|+|+.|+..
T Consensus 175 ~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~LpLi~lDfScNkis 224 (722)
T KOG0532|consen 175 KNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLPLIRLDFSCNKIS 224 (722)
T ss_pred hhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCceeeeecccCcee
Confidence 88887 77888888888888888888887 677777654 45788888765
No 477
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.77 E-value=2e-10 Score=97.70 Aligned_cols=134 Identities=22% Similarity=0.397 Sum_probs=102.1
Q ss_pred EEcCCCCeEEEEeCCCCccccCCcc---ccCCCCCCEEEccCCCCCCCCcccc-cccccCcEeeecCCCccccCCCcccc
Q 007073 71 ICDNSNNVASVTLSSMNFSGTLSPR---IGVLRTLSTLTLKGNGITGEIPEEL-GNLSSLTSLDLDNNRLVGKIPPSLGN 146 (619)
Q Consensus 71 ~c~~~~~l~~L~L~~n~l~~~~~~~---~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~ 146 (619)
+|++...+..++|+++.|. .++.. +.....|+..+|++|.+. ..|+.| .+.+.++.|+|++|.|+ .+|..+..
T Consensus 22 rcedakE~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aa 98 (177)
T KOG4579|consen 22 RCEDAKELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAA 98 (177)
T ss_pred hhHHHHHhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhh
Confidence 3666667888899999886 45543 445567777899999999 555544 45568999999999999 78999999
Q ss_pred cccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCcccc--ccCc-cccCCCCCCCCC
Q 007073 147 LKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF--QIPK-YNFTGNNLNCGK 209 (619)
Q Consensus 147 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~--~l~~-l~~~~n~~~c~~ 209 (619)
++.|+.|++++|.|. ..|..+..|.+|-.|+..+|.+. .||..+. .++- .++.++++.-++
T Consensus 99 m~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~ 162 (177)
T KOG4579|consen 99 MPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDET 162 (177)
T ss_pred hHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccC
Confidence 999999999999998 88888888999999999999998 7885532 2222 234555554443
No 478
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.75 E-value=1.7e-08 Score=121.04 Aligned_cols=126 Identities=21% Similarity=0.325 Sum_probs=76.1
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+|+.|+|++|++. .++..+..+++|+.|+|++|...+.+|. ++.+++|+.|+|++|.....+|..++++++|+.|+++
T Consensus 612 ~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~ 689 (1153)
T PLN03210 612 NLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMS 689 (1153)
T ss_pred CCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCC
Confidence 5666666666665 4555566666666666665543335554 5666666666666655444666666666666666666
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccccCCccccccCccccCCCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNL 205 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~~ 205 (619)
+|..-+.+|..+ ++++|+.|++++|...+.+|....++..|++.+|..
T Consensus 690 ~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i 737 (1153)
T PLN03210 690 RCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAI 737 (1153)
T ss_pred CCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCcc
Confidence 654333566554 566666666666655555665555666666666653
No 479
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.74 E-value=9.8e-08 Score=91.79 Aligned_cols=136 Identities=22% Similarity=0.177 Sum_probs=96.2
Q ss_pred CcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-------------------C--cchHHHHHHHHHHHHHccCC--C
Q 007073 296 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-------------------S--PGGDAAFQREVEMISVAVHR--N 352 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-------------------~--~~~~~~~~~E~~~l~~l~H~--n 352 (619)
..+++.||-|--+.||.|...+|.++|||.-+... + ........+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34568999999999999999999999999542100 0 01223567788888888654 4
Q ss_pred ccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC
Q 007073 353 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD 432 (619)
Q Consensus 353 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 432 (619)
+.+.++ .+...+||||+++--|...- ++......++..|.+-+.-+-.. ||||+|+++-||+++
T Consensus 173 VP~P~~----~nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIA----WNRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVT 236 (304)
T ss_pred CCCccc----cccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEe
Confidence 555544 35678999999884443211 12223344555555555555566 999999999999999
Q ss_pred CCCcEEEccccccee
Q 007073 433 EDFEAVVGDFGLAKL 447 (619)
Q Consensus 433 ~~~~~kl~DfGla~~ 447 (619)
+++.+.++||--+..
T Consensus 237 ~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 237 EDGDIVVIDWPQAVP 251 (304)
T ss_pred cCCCEEEEeCccccc
Confidence 999999999987653
No 480
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.74 E-value=9.8e-09 Score=71.18 Aligned_cols=40 Identities=40% Similarity=0.892 Sum_probs=30.8
Q ss_pred chhHHHHHHHHHhcC-CCCCCCCCCCCCC-CCCCCcceeEEc
Q 007073 34 SLSGDALFALRTSLR-VPNNQLRDWNQNQ-VNPCTWSNVICD 73 (619)
Q Consensus 34 ~~~~~al~~~k~~l~-~~~~~l~~w~~~~-~~~c~w~gv~c~ 73 (619)
..|.+||++||.++. +|.+.+.+|+... .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 368999999999998 5778999999864 799999999996
No 481
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.69 E-value=2.3e-09 Score=102.81 Aligned_cols=108 Identities=23% Similarity=0.293 Sum_probs=93.1
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
+.++.|++|+|.|... . .+..|++|+.||||+|.++ .+.+.-.+|-+.+.|.|+.|.|. .+ ..+++|-+|..||+
T Consensus 307 Pkir~L~lS~N~i~~v-~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE-~L-SGL~KLYSLvnLDl 381 (490)
T KOG1259|consen 307 PKLRRLILSQNRIRTV-Q-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIE-TL-SGLRKLYSLVNLDL 381 (490)
T ss_pred cceeEEeccccceeee-h-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHh-hh-hhhHhhhhheeccc
Confidence 5899999999999844 3 3889999999999999999 77777778999999999999988 33 36788999999999
Q ss_pred cCCcCCCCC--CCccccccccccccCCCCcccccCCc
Q 007073 156 SQNNFSGTI--PDSLTTLSSLISIQLDSNNLSGQIPV 190 (619)
Q Consensus 156 ~~N~l~~~~--p~~~~~l~~L~~L~l~~N~l~~~~p~ 190 (619)
++|+|. .+ -..+++||.|+.|.|.+|.+. .+|+
T Consensus 382 ~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl~-~~vd 416 (490)
T KOG1259|consen 382 SSNQIE-ELDEVNHIGNLPCLETLRLTGNPLA-GSVD 416 (490)
T ss_pred cccchh-hHHHhcccccccHHHHHhhcCCCcc-ccch
Confidence 999998 44 246899999999999999999 4553
No 482
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.67 E-value=6.8e-10 Score=117.83 Aligned_cols=125 Identities=30% Similarity=0.393 Sum_probs=60.0
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCC-cccccccchhhhc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPP-SLGNLKKLQFLTL 155 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l 155 (619)
.|...+.+.|.+. ....++.-++.|+.|||++|+++..- .+..|++|++|||++|.+. .+|. ....++ |+.|.|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 3444455555554 33444555555555555555555222 3555555555555555555 3332 122222 555555
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCC----ccccccCccccCCCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP----VHLFQIPKYNFTGNNLNCG 208 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p----~~l~~l~~l~~~~n~~~c~ 208 (619)
+||.++ .+ ..+.+|.+|+.||++.|-|.+--- ..+..+..|.+.|||.-|.
T Consensus 240 rnN~l~-tL-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 240 RNNALT-TL-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred cccHHH-hh-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 555555 22 224455555555555555542211 1233445555555555553
No 483
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.64 E-value=2e-09 Score=111.01 Aligned_cols=131 Identities=24% Similarity=0.343 Sum_probs=91.5
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCC---CCEEEccCCCCCC----CCccccccc-ccCcEeeecCCCcccc----CCC
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRT---LSTLTLKGNGITG----EIPEELGNL-SSLTSLDLDNNRLVGK----IPP 142 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p~ 142 (619)
..+|+.|+|++|.+.+..+..+..+.+ |+.|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 458888899888887666666665555 8889998888873 233445566 8888899998888832 334
Q ss_pred cccccccchhhhccCCcCCCC----CCCccccccccccccCCCCcccccCCc-------cccccCccccCCCCC
Q 007073 143 SLGNLKKLQFLTLSQNNFSGT----IPDSLTTLSSLISIQLDSNNLSGQIPV-------HLFQIPKYNFTGNNL 205 (619)
Q Consensus 143 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~-------~l~~l~~l~~~~n~~ 205 (619)
.+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++.-.. .+.++..|++++|+.
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l 233 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNL 233 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcC
Confidence 556677888888888888742 333445556888888888888633221 233567777877764
No 484
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.61 E-value=7.9e-08 Score=115.30 Aligned_cols=125 Identities=18% Similarity=0.300 Sum_probs=95.7
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+|+.|++.++.+. .+|..| .+.+|+.|+|++|++. .+|..+..+++|+.|+|++|...+.+| .++.+++|+.|+|+
T Consensus 590 ~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~ 665 (1153)
T PLN03210 590 KLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLS 665 (1153)
T ss_pred ccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEec
Confidence 4777777777766 566666 5688888888888888 677778888899999998876444676 47888889999998
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccccCCcc--ccccCccccCCCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH--LFQIPKYNFTGNNL 205 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--l~~l~~l~~~~n~~ 205 (619)
+|.....+|..+..+++|+.|++++|..-+.+|.. +.+|..|++.||..
T Consensus 666 ~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~ 716 (1153)
T PLN03210 666 DCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSR 716 (1153)
T ss_pred CCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCC
Confidence 87755688888888889999999886544477763 45677778877653
No 485
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.60 E-value=1.7e-08 Score=107.44 Aligned_cols=128 Identities=33% Similarity=0.522 Sum_probs=105.9
Q ss_pred CCCeEEEEeCCCCccccCCccccCCC-CCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLR-TLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
...++.|++.+|+++ .+++....++ +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 347999999999999 6677777785 9999999999999 88777899999999999999999 788887799999999
Q ss_pred hccCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNC 207 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c 207 (619)
++++|+++ .+|..+..+..|+.|.+++|++. .++..+. ++..+.+.+|+..+
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~ 246 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED 246 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee
Confidence 99999999 88887767777999999999655 4555444 44445566776655
No 486
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.58 E-value=3.9e-09 Score=108.79 Aligned_cols=130 Identities=22% Similarity=0.279 Sum_probs=98.1
Q ss_pred CCeEEEEeCCCCccc------cCCccccCCCCCCEEEccCCCCCCCCccccccccc---CcEeeecCCCccc----cCCC
Q 007073 76 NNVASVTLSSMNFSG------TLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSS---LTSLDLDNNRLVG----KIPP 142 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~ 142 (619)
.+++.|+++++.+.+ .++..+..+++|+.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+..
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~ 130 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAK 130 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHH
Confidence 468899999888772 34456777889999999999998777777777766 9999999999883 3334
Q ss_pred ccccc-ccchhhhccCCcCCCC----CCCccccccccccccCCCCccccc----CCcccc---ccCccccCCCCC
Q 007073 143 SLGNL-KKLQFLTLSQNNFSGT----IPDSLTTLSSLISIQLDSNNLSGQ----IPVHLF---QIPKYNFTGNNL 205 (619)
Q Consensus 143 ~~~~l-~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~l~---~l~~l~~~~n~~ 205 (619)
.+..+ ++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++. ++..+. ++..|++++|.+
T Consensus 131 ~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i 205 (319)
T cd00116 131 GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGL 205 (319)
T ss_pred HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCcc
Confidence 55666 8999999999999843 233456677899999999999842 333344 778888888865
No 487
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.57 E-value=9.5e-09 Score=87.67 Aligned_cols=114 Identities=28% Similarity=0.360 Sum_probs=94.5
Q ss_pred CCeEEEEeCCCCccccCCcccc-CCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 76 NNVASVTLSSMNFSGTLSPRIG-VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
.+|+.++|++|.+. ..|+.|. .++.++.|+|++|.|+ .+|.++..++.|+.|+++.|.|. ..|..+..|.+|..|+
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 47999999999999 4555554 5679999999999999 89999999999999999999999 7888898999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCcccc
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF 193 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 193 (619)
..+|.+. .+|-.+.--+.+-..++.+|.+.+.-|..+.
T Consensus 130 s~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klq 167 (177)
T KOG4579|consen 130 SPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQ 167 (177)
T ss_pred CCCCccc-cCcHHHhccccHHHHHhcCCcccccCccccc
Confidence 9999998 6776544333444556788889887775543
No 488
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.57 E-value=3e-08 Score=105.52 Aligned_cols=120 Identities=33% Similarity=0.538 Sum_probs=103.4
Q ss_pred EEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccc-cCcEeeecCCCccccCCCcccccccchhhhccCC
Q 007073 80 SVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLS-SLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQN 158 (619)
Q Consensus 80 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 158 (619)
.|+++.|.+... ...+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 588888888533 345667789999999999999 7888788885 9999999999999 78888999999999999999
Q ss_pred cCCCCCCCccccccccccccCCCCcccccCCcc---ccccCccccCCCC
Q 007073 159 NFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNN 204 (619)
Q Consensus 159 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~---l~~l~~l~~~~n~ 204 (619)
+++ .+|.....+++|+.|++++|+++ .+|.. ...+..+.+++|+
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~ 220 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNS 220 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCc
Confidence 999 88887778899999999999999 78874 3458899999996
No 489
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.56 E-value=1.8e-08 Score=107.85 Aligned_cols=150 Identities=15% Similarity=0.246 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcce--------eeeccccccccccccccC
Q 007073 402 LGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV--------TTQVRGTMGHIAPEYLST 473 (619)
Q Consensus 402 ~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~ 473 (619)
.+++.|+.|+|... ++||++|.|++|.++.++..||+.|+.+.......... .....-...|.|||++..
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34569999999874 89999999999999999999999999876543311111 011123457999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhc
Q 007073 474 GKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLC 552 (619)
Q Consensus 474 ~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~C 552 (619)
...+.++|+||+||++|-+.. |+.-+....... ...... ..+..-.-.+....+.++.+=+.+.
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-----~~~~~~----------~~~~~~~~~~s~~~p~el~~~l~k~ 248 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-----SYSFSR----------NLLNAGAFGYSNNLPSELRESLKKL 248 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcc-----hhhhhh----------cccccccccccccCcHHHHHHHHHH
Confidence 888999999999999999984 554443221110 000000 0000000111233345677777788
Q ss_pred cCCCCCCCCCHHHHHH
Q 007073 553 TQASPEDRPAMSEVVR 568 (619)
Q Consensus 553 l~~dP~~RPs~~evl~ 568 (619)
+..++.-||++.++..
T Consensus 249 l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 249 LNGDSAVRPTLDLLLS 264 (700)
T ss_pred hcCCcccCcchhhhhc
Confidence 9999999997766653
No 490
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.52 E-value=5.8e-07 Score=86.26 Aligned_cols=124 Identities=19% Similarity=0.205 Sum_probs=90.2
Q ss_pred CCcEEEEEEeccCCC------cchHHHHHHHHHHHHHccCCC--ccceeeeeeCCC----cceeEecccccc-hhhhhhc
Q 007073 317 DGTKVAVKRLTDFES------PGGDAAFQREVEMISVAVHRN--LLRLIGFCTTPT----ERLLVYPFMQNL-SVAYRLR 383 (619)
Q Consensus 317 ~g~~vAvK~l~~~~~------~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~ 383 (619)
.++.+.+|....... +-......+|...+..+.... ..+.+++..... ..++|+|++++. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 356677775432111 123446778888887776433 345566655432 347899999874 7888887
Q ss_pred ccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---cEEEccccccee
Q 007073 384 EIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF---EAVVGDFGLAKL 447 (619)
Q Consensus 384 ~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfGla~~ 447 (619)
.... .+......++.++++.++-||+. ||+|+|+++.|||++.+. .+.++||+-++.
T Consensus 111 ~~~~----~~~~~~~~ll~~l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 111 QWEQ----LDPSQRRELLRALARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred hhcc----cchhhHHHHHHHHHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 5322 45556788999999999999999 999999999999999887 899999998764
No 491
>PRK09902 hypothetical protein; Provisional
Probab=98.43 E-value=4.2e-06 Score=78.88 Aligned_cols=138 Identities=20% Similarity=0.194 Sum_probs=101.5
Q ss_pred cccCCCceEEEEEeCCCcEEEEEEeccC--CC---cchHHHHHHHHHHHHHccCCC--ccceeeeee---CC--CcceeE
Q 007073 302 LGQGGFGKVYRGVLADGTKVAVKRLTDF--ES---PGGDAAFQREVEMISVAVHRN--LLRLIGFCT---TP--TERLLV 369 (619)
Q Consensus 302 lg~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~---~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~---~~--~~~~lv 369 (619)
-|+||-+-|++.... |+.+-+|+-... .+ +-+...|.+|+..+.++...+ +.+.. ++. .+ -.-.||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 477899999998874 567999976421 11 446789999999999886433 33443 332 11 235788
Q ss_pred eccccc-chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--EEEcccccce
Q 007073 370 YPFMQN-LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE--AVVGDFGLAK 446 (619)
Q Consensus 370 ~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfGla~ 446 (619)
+|-+.+ -+|.+++.+... .+.+...+..++.+++++++-||+. |+.|+|+.+.||+++.++. ++++||--++
T Consensus 104 Te~L~g~~~L~~~l~~~~~--~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV--SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCc--CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 887764 477777754221 2356677789999999999999999 9999999999999986666 9999998665
No 492
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.41 E-value=1.1e-06 Score=94.51 Aligned_cols=142 Identities=23% Similarity=0.263 Sum_probs=92.8
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEeccCCCc---------------------c--------hHH----------HHHH
Q 007073 300 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESP---------------------G--------GDA----------AFQR 340 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~---------------------~--------~~~----------~~~~ 340 (619)
+-|+.++-|.||+|++++|+.||||+.+....+ . ..+ ++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 679999999999999999999999987531110 0 001 2344
Q ss_pred HHHHHHHcc----CCCccceeeeee-CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHH-HHHHHhc
Q 007073 341 EVEMISVAV----HRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARG-LEYLHEH 414 (619)
Q Consensus 341 E~~~l~~l~----H~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~-L~~LH~~ 414 (619)
|..-+.+++ ...-+++=.++. -..+..++|||++|-.+.+...-...+ .+ +..++..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g---~d---~k~ia~~~~~~f~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG---ID---RKELAELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC---CC---HHHHHHHHHHHHHHHHHhc
Confidence 554444432 222223333333 356789999999998888774332222 33 23334333332 2223334
Q ss_pred CCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 415 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 415 ~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
|++|.|..|.||+++.++.+.+.|||+...++.
T Consensus 285 ---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 ---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 899999999999999999999999999877653
No 493
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.35 E-value=6.9e-06 Score=79.88 Aligned_cols=138 Identities=14% Similarity=0.159 Sum_probs=84.7
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCc--cceeeeeeCCCcceeEecccccch
Q 007073 300 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL--LRLIGFCTTPTERLLVYPFMQNLS 377 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~~~~~lv~e~~~~gs 377 (619)
..||+|..+.||+. .|..+++|...... ......+|.++++.+..-.+ .+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 46899999999984 25567888775422 23456889999988875443 566777777777789999999863
Q ss_pred -hhhh---------------------hcccCCCCCCcCHHHHHH-HHH----------HHH-HHHHHHHhc-CCCCeEec
Q 007073 378 -VAYR---------------------LREIKPGEPVLDWVTRKR-VAL----------GAA-RGLEYLHEH-CNPKIIHR 422 (619)
Q Consensus 378 -L~~~---------------------l~~~~~~~~~l~~~~~~~-i~~----------~ia-~~L~~LH~~-~~~~ivH~ 422 (619)
+... +|....... ....... +.. .+. ....+|... ..+.++|+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~--~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~Hg 158 (226)
T TIGR02172 81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTS--TFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHG 158 (226)
T ss_pred chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCC--cHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEec
Confidence 1111 121111111 1111000 000 011 112222221 13357899
Q ss_pred CCCCCcEEeCCCCcEEEcccccce
Q 007073 423 DVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 423 Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
|+.|.||++++++ +.++||+.+.
T Consensus 159 D~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 159 DFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCCcEEEcCCC-cEEEechhcC
Confidence 9999999999888 9999999875
No 494
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.34 E-value=1.5e-07 Score=95.17 Aligned_cols=110 Identities=25% Similarity=0.310 Sum_probs=58.5
Q ss_pred CCCeEEEEeCCCCcccc-CCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCC--Ccccccccch
Q 007073 75 SNNVASVTLSSMNFSGT-LSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIP--PSLGNLKKLQ 151 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~ 151 (619)
.++++.|.|++|+|+-. +-..+..+|+|..|+|..|..-+.-......+..|+.|||++|++. ..+ ...+.++.|+
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~ 274 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLN 274 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchh
Confidence 34556666666655521 1112234566666666666422232333444566666666666665 333 3455666666
Q ss_pred hhhccCCcCCCC-CCCc-----cccccccccccCCCCccc
Q 007073 152 FLTLSQNNFSGT-IPDS-----LTTLSSLISIQLDSNNLS 185 (619)
Q Consensus 152 ~L~l~~N~l~~~-~p~~-----~~~l~~L~~L~l~~N~l~ 185 (619)
.|+++.+.+... .|+. ...+++|++|++..|++.
T Consensus 275 ~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 275 QLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hhhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 666666666522 2333 344566666666666664
No 495
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.27 E-value=3.4e-07 Score=97.81 Aligned_cols=127 Identities=26% Similarity=0.315 Sum_probs=75.5
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.++..|+|.+|+|..+ ...+..+++|++|+|++|.|+...+ +..++.|+.|++++|.|+ .++ .+..+++|+.+++
T Consensus 95 ~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~-~~~-~~~~l~~L~~l~l 169 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLIS-DIS-GLESLKSLKLLDL 169 (414)
T ss_pred cceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhhheeccCcch-hcc-CCccchhhhcccC
Confidence 4677777777777643 2235667777777777777773332 566666777777777777 232 4455677777777
Q ss_pred cCCcCCCCCCCc-cccccccccccCCCCcccccCC--ccccccCccccCCCCCCCCC
Q 007073 156 SQNNFSGTIPDS-LTTLSSLISIQLDSNNLSGQIP--VHLFQIPKYNFTGNNLNCGK 209 (619)
Q Consensus 156 ~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p--~~l~~l~~l~~~~n~~~c~~ 209 (619)
++|++. .+... ...+.+|+.+++.+|.+. .+. ..+..+..+++..|......
T Consensus 170 ~~n~i~-~ie~~~~~~~~~l~~l~l~~n~i~-~i~~~~~~~~l~~~~l~~n~i~~~~ 224 (414)
T KOG0531|consen 170 SYNRIV-DIENDELSELISLEELDLGGNSIR-EIEGLDLLKKLVLLSLLDNKISKLE 224 (414)
T ss_pred Ccchhh-hhhhhhhhhccchHHHhccCCchh-cccchHHHHHHHHhhcccccceecc
Confidence 777776 33332 356667777777777776 222 12233344455555554443
No 496
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.22 E-value=3.6e-07 Score=97.66 Aligned_cols=128 Identities=26% Similarity=0.330 Sum_probs=100.7
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
..+..+++..|.+.. +-..+..+++|..|+|.+|+|. .+...+..+++|++|+|++|.|+..- .+..++.|+.|++
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l 147 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNL 147 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhhee
Confidence 467777788888874 4455788999999999999999 55555788999999999999999433 4677888999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCC---ccccccCccccCCCCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP---VHLFQIPKYNFTGNNLNCGK 209 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p---~~l~~l~~l~~~~n~~~c~~ 209 (619)
++|.|+ .+ ..+..+++|+.+++++|+++..-+ ..+.++..+.+.+|......
T Consensus 148 ~~N~i~-~~-~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~ 202 (414)
T KOG0531|consen 148 SGNLIS-DI-SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREIE 202 (414)
T ss_pred ccCcch-hc-cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhccc
Confidence 999998 44 345668999999999999995444 45567777888888875443
No 497
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.22 E-value=3.4e-07 Score=92.66 Aligned_cols=62 Identities=27% Similarity=0.237 Sum_probs=31.0
Q ss_pred CCeEEEEeCCCCccccC--CccccCCCCCCEEEccCCCCCCCCccc-ccccccCcEeeecCCCcc
Q 007073 76 NNVASVTLSSMNFSGTL--SPRIGVLRTLSTLTLKGNGITGEIPEE-LGNLSSLTSLDLDNNRLV 137 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~ 137 (619)
.+++.||||+|-+..-. -.-...|++|+.|+|+.|++.-..... -..+++|+.|.|+.+.|+
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls 210 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLS 210 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCC
Confidence 35666666666554321 122345666666666666665222111 123445555555555554
No 498
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.19 E-value=1.3e-06 Score=60.63 Aligned_cols=37 Identities=43% Similarity=0.715 Sum_probs=22.1
Q ss_pred CCCCEEEccCCCCCCCCcccccccccCcEeeecCCCcc
Q 007073 100 RTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLV 137 (619)
Q Consensus 100 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 137 (619)
++|++|+|++|+|+ .+|..+++|++|+.|+|++|+|+
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 35666666666666 45555666666666666666666
No 499
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.17 E-value=2.3e-05 Score=74.93 Aligned_cols=153 Identities=23% Similarity=0.257 Sum_probs=94.0
Q ss_pred CHHHHHHHhcCCcccC---ccccCCCceEEEEEeCCCcEEEEEEeccCCCc--------chHH--------------H-H
Q 007073 285 SWRELQLATDNFSEKN---VLGQGGFGKVYRGVLADGTKVAVKRLTDFESP--------GGDA--------------A-F 338 (619)
Q Consensus 285 ~~~el~~~~~~~~~~~---~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--------~~~~--------------~-~ 338 (619)
++..+........+.. .|++|--+.||+|...++..+|||+.+..... .+.. . .
T Consensus 36 t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~ 115 (268)
T COG1718 36 TLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWA 115 (268)
T ss_pred HHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHH
Confidence 3444444444444444 46677777999999888999999988532110 0000 1 1
Q ss_pred HHHHHHHHHccCC--CccceeeeeeCCCcceeEecccccc-hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC
Q 007073 339 QREVEMISVAVHR--NLLRLIGFCTTPTERLLVYPFMQNL-SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 415 (619)
Q Consensus 339 ~~E~~~l~~l~H~--niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ 415 (619)
.+|+.-|.++... .+.+.+++ ....|||||+... .-.-.|.+ ..+.......+..++.+.+.-|-..+
T Consensus 116 ~kEf~NL~R~~eAGVrvP~Pi~~----~~nVLvMEfIg~~g~pAP~LkD-----v~~e~~e~~~~~~~~v~~~~~l~~~a 186 (268)
T COG1718 116 RKEFRNLKRAYEAGVRVPEPIAF----RNNVLVMEFIGDDGLPAPRLKD-----VPLELEEAEGLYEDVVEYMRRLYKEA 186 (268)
T ss_pred HHHHHHHHHHHHcCCCCCCceee----cCCeEEEEeccCCCCCCCCccc-----CCcCchhHHHHHHHHHHHHHHHHHhc
Confidence 2344445444322 22222222 3468999998653 11111222 11222245667778888888887743
Q ss_pred CCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 416 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 416 ~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
++||+||+.-|||+. ++.+.|+|||-|....
T Consensus 187 --~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 187 --GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred --CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 999999999999999 7899999999987543
No 500
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.16 E-value=2.6e-05 Score=73.82 Aligned_cols=138 Identities=14% Similarity=0.142 Sum_probs=91.6
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHH---------HHHHHHHHHccC---CCccceee
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAF---------QREVEMISVAVH---RNLLRLIG 358 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~---------~~E~~~l~~l~H---~niv~l~~ 358 (619)
....+|...+++.......|.+-.. +|..+++|..+.... ..++.| .+++..+.+++. -....++.
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~-r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENR-RPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhh-hHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 4567788888888888777777776 589999998764321 122222 233333334432 22333333
Q ss_pred eeeC-----CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC
Q 007073 359 FCTT-----PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE 433 (619)
Q Consensus 359 ~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 433 (619)
+... ....+++|||++|..|.+... ++. .++..+++++.-+|+. |++|+|..|.|+++++
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~ 170 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSN 170 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEEC
Confidence 3222 234578999999977765432 111 2456677889999999 9999999999999996
Q ss_pred CCcEEEcccccce
Q 007073 434 DFEAVVGDFGLAK 446 (619)
Q Consensus 434 ~~~~kl~DfGla~ 446 (619)
++ ++++||+..+
T Consensus 171 ~~-i~iID~~~k~ 182 (229)
T PF06176_consen 171 NG-IRIIDTQGKR 182 (229)
T ss_pred Cc-EEEEECcccc
Confidence 64 9999998665
Done!