Query 007073
Match_columns 619
No_of_seqs 683 out of 5463
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 16:27:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007073.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007073hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 2.3E-55 8E-60 446.4 18.7 259 294-573 26-304 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 6.2E-55 2.1E-59 441.4 15.7 259 293-573 12-287 (299)
3 4aoj_A High affinity nerve gro 100.0 2.2E-54 7.7E-59 443.3 19.0 259 293-573 40-317 (329)
4 3omv_A RAF proto-oncogene seri 100.0 5.6E-54 1.9E-58 434.5 18.8 262 290-573 32-298 (307)
5 4ase_A Vascular endothelial gr 100.0 1.9E-53 6.4E-58 440.0 15.2 271 283-573 53-345 (353)
6 4b9d_A Serine/threonine-protei 100.0 3.6E-52 1.2E-56 427.1 16.0 251 294-568 24-276 (350)
7 3hmm_A TGF-beta receptor type- 100.0 1.5E-51 5.3E-56 419.1 18.4 265 294-573 3-295 (303)
8 4fih_A Serine/threonine-protei 100.0 8.5E-51 2.9E-55 416.3 22.4 249 294-568 74-323 (346)
9 3fpq_A Serine/threonine-protei 100.0 2.5E-51 8.7E-56 412.0 18.1 247 297-568 29-282 (290)
10 4g3f_A NF-kappa-beta-inducing 100.0 2.7E-51 9.4E-56 418.7 17.9 250 294-572 58-313 (336)
11 3uim_A Brassinosteroid insensi 100.0 6.6E-51 2.2E-55 420.4 20.9 319 269-587 5-323 (326)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.9E-51 6.6E-56 414.9 13.9 248 294-567 32-283 (311)
13 4fie_A Serine/threonine-protei 100.0 1.3E-49 4.6E-54 417.4 23.9 250 293-568 150-400 (423)
14 3hyh_A Carbon catabolite-derep 100.0 1.5E-49 5E-54 395.7 22.8 246 294-568 13-262 (275)
15 4g31_A Eukaryotic translation 100.0 3.7E-49 1.3E-53 399.7 18.9 251 294-568 5-279 (299)
16 3ubd_A Ribosomal protein S6 ki 100.0 2.3E-50 8E-55 407.0 9.6 243 294-563 24-271 (304)
17 4b99_A Mitogen-activated prote 100.0 1E-45 3.5E-50 388.7 23.5 262 294-568 54-344 (398)
18 2qkw_B Protein kinase; three-h 100.0 1.2E-45 3.9E-50 380.3 23.5 283 285-573 30-313 (321)
19 4f9c_A Cell division cycle 7-r 100.0 4.1E-46 1.4E-50 387.5 19.7 198 292-502 19-250 (361)
20 3v5w_A G-protein coupled recep 100.0 1.1E-44 3.9E-49 396.6 18.5 249 293-567 188-448 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 2.5E-44 8.5E-49 396.4 20.1 252 293-568 156-410 (573)
22 2psq_A Fibroblast growth facto 100.0 1.1E-43 3.8E-48 372.6 20.5 261 292-573 79-362 (370)
23 2nru_A Interleukin-1 receptor- 100.0 3.5E-42 1.2E-46 351.9 28.8 283 280-573 11-304 (307)
24 3s95_A LIMK-1, LIM domain kina 100.0 7.8E-43 2.7E-47 357.3 23.6 258 293-574 9-281 (310)
25 3kul_A Ephrin type-A receptor 100.0 2.6E-43 9E-48 363.3 18.3 258 292-573 47-311 (325)
26 3p86_A Serine/threonine-protei 100.0 1.1E-43 3.6E-48 363.5 14.9 265 286-573 29-296 (309)
27 3zgw_A Maternal embryonic leuc 100.0 7.7E-43 2.6E-47 362.1 20.7 251 292-568 8-260 (347)
28 3cbl_A C-FES, proto-oncogene t 100.0 1E-43 3.6E-48 374.0 14.1 260 290-573 110-372 (377)
29 2qol_A Ephrin receptor; recept 100.0 2.9E-43 9.9E-48 369.8 17.0 258 292-573 43-307 (373)
30 3vhe_A Vascular endothelial gr 100.0 2E-43 6.9E-48 369.3 15.5 271 283-573 11-353 (359)
31 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.6E-43 2.6E-47 349.5 18.9 257 292-574 6-263 (268)
32 4hcu_A Tyrosine-protein kinase 100.0 4.6E-43 1.6E-47 351.4 16.9 256 292-573 8-264 (269)
33 1rjb_A FL cytokine receptor; k 100.0 3.2E-43 1.1E-47 365.6 15.8 266 289-574 40-333 (344)
34 3fxz_A Serine/threonine-protei 100.0 1.7E-42 5.8E-47 352.6 20.8 250 293-568 19-269 (297)
35 3tt0_A Basic fibroblast growth 100.0 8.1E-43 2.8E-47 367.9 19.0 262 291-573 66-350 (382)
36 3l9p_A Anaplastic lymphoma kin 100.0 6.2E-43 2.1E-47 366.6 16.6 260 293-573 70-343 (367)
37 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-42 5E-47 377.9 20.0 260 290-574 216-477 (495)
38 2ivs_A Proto-oncogene tyrosine 100.0 5.2E-43 1.8E-47 359.0 15.3 263 290-573 19-309 (314)
39 1luf_A Muscle-specific tyrosin 100.0 5.5E-43 1.9E-47 363.5 15.6 266 288-574 41-334 (343)
40 4eqm_A Protein kinase; transfe 100.0 1.7E-42 5.7E-47 352.2 18.3 262 293-575 10-275 (294)
41 4euu_A Serine/threonine-protei 100.0 1.3E-41 4.6E-46 349.6 24.8 275 293-574 8-308 (319)
42 1qcf_A Haematopoetic cell kina 100.0 5.6E-43 1.9E-47 377.5 15.1 260 289-574 183-443 (454)
43 3q4u_A Activin receptor type-1 100.0 2.7E-42 9.4E-47 351.4 19.2 262 292-573 6-300 (301)
44 3fe3_A MAP/microtubule affinit 100.0 5.6E-42 1.9E-46 353.4 21.5 249 292-568 13-264 (328)
45 3gen_A Tyrosine-protein kinase 100.0 1.7E-42 5.8E-47 349.9 17.3 258 290-573 20-278 (283)
46 3tki_A Serine/threonine-protei 100.0 2.4E-42 8.3E-47 355.7 18.5 254 293-569 6-262 (323)
47 2c30_A Serine/threonine-protei 100.0 2E-41 6.9E-46 348.6 25.2 261 282-568 23-294 (321)
48 1mp8_A Focal adhesion kinase 1 100.0 2.2E-42 7.6E-47 348.8 17.6 258 291-573 12-274 (281)
49 3poz_A Epidermal growth factor 100.0 1.2E-42 4.2E-47 358.7 16.0 256 293-573 14-276 (327)
50 3soc_A Activin receptor type-2 100.0 2.1E-42 7.1E-47 356.2 17.2 271 291-573 21-316 (322)
51 1t46_A HOMO sapiens V-KIT hard 100.0 2.1E-42 7E-47 354.4 16.2 264 290-573 19-305 (313)
52 2i1m_A Macrophage colony-stimu 100.0 7E-43 2.4E-47 361.4 12.5 266 288-573 40-324 (333)
53 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.9E-42 9.9E-47 371.5 17.4 259 290-574 180-439 (452)
54 3kfa_A Tyrosine-protein kinase 100.0 2.1E-42 7.2E-47 350.0 15.2 261 288-573 7-269 (288)
55 3niz_A Rhodanese family protei 100.0 1.6E-41 5.6E-46 347.7 21.4 265 292-568 19-300 (311)
56 2pvf_A Fibroblast growth facto 100.0 6.5E-42 2.2E-46 354.3 18.4 263 290-573 31-316 (334)
57 1csn_A Casein kinase-1; phosph 100.0 3.2E-41 1.1E-45 343.0 23.1 261 292-573 8-281 (298)
58 2izr_A Casein kinase I isoform 100.0 4.5E-41 1.5E-45 347.5 24.5 259 293-573 8-279 (330)
59 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-41 4E-46 366.7 20.5 252 291-573 190-443 (450)
60 3ugc_A Tyrosine-protein kinase 100.0 6.7E-42 2.3E-46 347.7 17.3 266 292-573 8-289 (295)
61 3qd2_B Eukaryotic translation 100.0 6.9E-42 2.4E-46 353.3 17.5 252 293-568 5-325 (332)
62 4f0f_A Serine/threonine-protei 100.0 2.4E-41 8.2E-46 342.2 20.8 254 292-572 17-286 (287)
63 3lb7_A RAF proto-oncogene seri 100.0 3.3E-41 1.1E-45 344.8 21.8 261 291-573 33-298 (307)
64 3dtc_A Mitogen-activated prote 100.0 9.2E-42 3.1E-46 342.2 17.3 254 293-572 6-270 (271)
65 1o6l_A RAC-beta serine/threoni 100.0 1.4E-41 4.9E-46 351.5 18.9 249 293-568 4-260 (337)
66 2xir_A Vascular endothelial gr 100.0 7.9E-42 2.7E-46 350.5 16.9 271 283-573 16-308 (316)
67 3t9t_A Tyrosine-protein kinase 100.0 8.6E-42 2.9E-46 341.5 16.5 256 292-573 6-262 (267)
68 4dc2_A Protein kinase C IOTA t 100.0 2.3E-41 7.7E-46 356.5 20.4 254 292-563 50-307 (396)
69 4aw2_A Serine/threonine-protei 100.0 2.9E-42 9.8E-47 368.1 13.6 264 285-568 65-338 (437)
70 3lxp_A Non-receptor tyrosine-p 100.0 6.9E-42 2.4E-46 351.6 15.9 267 296-573 33-308 (318)
71 3c0i_A Peripheral plasma membr 100.0 5.1E-41 1.7E-45 350.0 22.6 256 293-568 23-286 (351)
72 2yab_A Death-associated protei 100.0 7.6E-41 2.6E-45 349.2 23.9 253 292-568 10-272 (361)
73 1qpc_A LCK kinase; alpha beta 100.0 5.6E-42 1.9E-46 345.3 14.8 259 289-573 8-267 (279)
74 2zv2_A Calcium/calmodulin-depe 100.0 2.5E-41 8.4E-46 344.1 19.4 250 293-568 12-292 (298)
75 3cc6_A Protein tyrosine kinase 100.0 1.4E-41 4.9E-46 342.8 17.5 257 292-573 10-271 (281)
76 3op5_A Serine/threonine-protei 100.0 1.3E-41 4.6E-46 356.3 17.9 267 292-573 33-327 (364)
77 4e5w_A Tyrosine-protein kinase 100.0 5E-42 1.7E-46 349.7 13.9 265 293-573 20-300 (302)
78 3v8s_A RHO-associated protein 100.0 3.9E-42 1.3E-46 364.3 13.4 260 286-568 61-329 (410)
79 3kex_A Receptor tyrosine-prote 100.0 5E-42 1.7E-46 353.8 13.8 256 293-573 12-274 (325)
80 2y0a_A Death-associated protei 100.0 1.4E-40 4.9E-45 343.0 24.3 252 293-568 10-271 (326)
81 3qup_A Tyrosine-protein kinase 100.0 6.2E-42 2.1E-46 352.7 14.1 264 289-573 18-296 (323)
82 1u59_A Tyrosine-protein kinase 100.0 3.3E-41 1.1E-45 341.3 19.1 256 293-573 8-270 (287)
83 1tki_A Titin; serine kinase, m 100.0 1.1E-40 3.9E-45 342.9 23.3 251 293-568 4-257 (321)
84 1p4o_A Insulin-like growth fac 100.0 7.1E-42 2.4E-46 352.0 14.3 268 285-573 16-297 (322)
85 3a8x_A Protein kinase C IOTA t 100.0 5.8E-41 2E-45 348.3 20.9 253 293-563 8-264 (345)
86 3o0g_A Cell division protein k 100.0 4.3E-41 1.5E-45 341.3 19.4 264 294-568 2-282 (292)
87 2pmi_A Negative RE, cyclin-dep 100.0 6.9E-41 2.4E-45 344.0 20.8 267 293-568 4-293 (317)
88 3lzb_A Epidermal growth factor 100.0 2.1E-41 7.3E-46 349.4 16.9 256 293-573 14-276 (327)
89 1ob3_A PFPK5, cell division co 100.0 4.9E-41 1.7E-45 340.2 19.1 263 294-568 2-280 (288)
90 1mqb_A Ephrin type-A receptor 100.0 5.2E-41 1.8E-45 347.4 19.5 257 293-573 43-307 (333)
91 2h8h_A Proto-oncogene tyrosine 100.0 1E-41 3.4E-46 374.7 14.8 261 288-574 261-522 (535)
92 3soa_A Calcium/calmodulin-depe 100.0 6.6E-41 2.2E-45 358.8 20.6 254 292-568 9-267 (444)
93 3is5_A Calcium-dependent prote 100.0 7.4E-41 2.5E-45 338.4 19.8 254 293-568 21-278 (285)
94 4fr4_A YANK1, serine/threonine 100.0 6.5E-41 2.2E-45 351.8 19.9 250 293-567 14-270 (384)
95 3kmu_A ILK, integrin-linked ki 100.0 1.6E-41 5.5E-46 340.0 14.5 252 293-573 9-268 (271)
96 4hgt_A Casein kinase I isoform 100.0 3.7E-40 1.3E-44 334.7 24.7 261 292-573 7-278 (296)
97 3dbq_A Dual specificity protei 100.0 3.5E-41 1.2E-45 350.1 17.5 253 292-569 7-274 (343)
98 2bdw_A Hypothetical protein K1 100.0 1.5E-40 5.2E-45 347.6 22.4 254 292-569 27-285 (362)
99 4eut_A Serine/threonine-protei 100.0 7.4E-41 2.5E-45 354.6 20.2 274 293-573 8-307 (396)
100 2ozo_A Tyrosine-protein kinase 100.0 3.3E-41 1.1E-45 375.9 18.3 255 294-573 335-596 (613)
101 3p1a_A MYT1 kinase, membrane-a 100.0 4.3E-41 1.5E-45 344.6 17.7 247 292-568 55-304 (311)
102 3c1x_A Hepatocyte growth facto 100.0 2.5E-41 8.4E-46 354.8 16.3 255 295-573 90-353 (373)
103 3og7_A AKAP9-BRAF fusion prote 100.0 7E-41 2.4E-45 339.3 18.8 262 290-573 20-286 (289)
104 2wqm_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 344.1 17.6 262 293-573 31-295 (310)
105 2vd5_A DMPK protein; serine/th 100.0 1.8E-41 6.2E-46 359.4 15.0 263 285-568 52-327 (412)
106 2buj_A Serine/threonine-protei 100.0 4.2E-41 1.4E-45 345.5 17.2 265 292-576 27-307 (317)
107 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.6E-41 5.4E-46 353.4 14.0 246 291-563 20-269 (353)
108 2eva_A TAK1 kinase - TAB1 chim 100.0 5.8E-41 2E-45 343.0 17.9 254 293-573 7-261 (307)
109 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.1E-41 1.1E-45 348.6 16.0 246 294-568 9-258 (336)
110 3pls_A Macrophage-stimulating 100.0 8.5E-41 2.9E-45 339.9 19.0 256 295-573 22-285 (298)
111 3uzp_A CKI-delta, CKID, casein 100.0 3.1E-40 1.1E-44 335.4 23.0 260 293-573 8-278 (296)
112 1xbb_A Tyrosine-protein kinase 100.0 3.2E-41 1.1E-45 342.1 15.6 260 288-573 10-277 (291)
113 3uc3_A Serine/threonine-protei 100.0 9E-41 3.1E-45 349.3 19.4 253 292-568 18-274 (361)
114 2v62_A Serine/threonine-protei 100.0 6.8E-41 2.3E-45 348.3 18.3 269 293-577 36-330 (345)
115 3hko_A Calcium/calmodulin-depe 100.0 2.1E-40 7.2E-45 344.4 21.9 262 289-568 21-330 (345)
116 2yex_A Serine/threonine-protei 100.0 1.5E-40 5E-45 334.2 20.0 253 293-568 6-261 (276)
117 3f66_A Hepatocyte growth facto 100.0 5.5E-41 1.9E-45 341.5 17.0 257 293-573 24-289 (298)
118 1fot_A TPK1 delta, CAMP-depend 100.0 2.4E-40 8.2E-45 339.7 21.9 246 293-568 5-258 (318)
119 3gni_B Strad alpha; kinase fol 100.0 1.3E-40 4.3E-45 352.1 20.2 272 292-568 23-333 (389)
120 2zmd_A Dual specificity protei 100.0 9E-41 3.1E-45 352.9 18.3 252 293-569 55-321 (390)
121 3mdy_A Bone morphogenetic prot 100.0 3.3E-40 1.1E-44 341.6 22.1 272 284-573 27-329 (337)
122 1kob_A Twitchin; kinase, intra 100.0 1.9E-40 6.4E-45 349.3 20.5 253 293-569 50-305 (387)
123 3gxj_A TGF-beta receptor type- 100.0 2.7E-42 9.1E-47 351.7 6.2 259 293-576 2-298 (303)
124 2h34_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 337.8 21.6 262 292-576 32-297 (309)
125 2jii_A Serine/threonine-protei 100.0 4.9E-41 1.7E-45 350.4 15.8 260 293-572 41-333 (352)
126 2w4o_A Calcium/calmodulin-depe 100.0 2.5E-40 8.7E-45 344.3 21.1 251 292-568 51-305 (349)
127 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.6E-41 2.9E-45 347.6 17.5 246 293-568 40-293 (350)
128 1fvr_A Tyrosine-protein kinase 100.0 5.7E-41 2E-45 346.2 15.9 258 293-573 24-298 (327)
129 3kn6_A Ribosomal protein S6 ki 100.0 1.5E-40 5E-45 342.7 18.9 250 299-568 16-270 (325)
130 2yfx_A Tyrosine-protein kinase 100.0 9.8E-41 3.4E-45 344.4 17.6 261 292-573 28-302 (327)
131 3a62_A Ribosomal protein S6 ki 100.0 1.3E-40 4.6E-45 343.3 18.6 250 292-568 15-276 (327)
132 1xjd_A Protein kinase C, theta 100.0 3.3E-41 1.1E-45 349.8 14.0 252 289-567 12-268 (345)
133 4agu_A Cyclin-dependent kinase 100.0 5.1E-40 1.8E-44 336.4 22.6 263 294-568 3-284 (311)
134 3lxl_A Tyrosine-protein kinase 100.0 2.5E-41 8.4E-46 348.9 12.7 272 293-574 22-302 (327)
135 1b6c_B TGF-B superfamily recep 100.0 4.9E-40 1.7E-44 341.1 22.5 270 283-573 31-334 (342)
136 2w5a_A Serine/threonine-protei 100.0 3.3E-41 1.1E-45 339.6 13.2 258 293-572 5-271 (279)
137 3brb_A Proto-oncogene tyrosine 100.0 1.9E-40 6.6E-45 340.0 18.6 265 288-573 28-306 (313)
138 3ork_A Serine/threonine protei 100.0 1E-40 3.4E-45 341.9 16.0 257 293-571 11-277 (311)
139 3llt_A Serine/threonine kinase 100.0 1.7E-40 5.7E-45 347.4 17.8 210 281-502 22-262 (360)
140 3a7i_A MST3 kinase, serine/thr 100.0 3.9E-40 1.4E-44 336.0 20.1 250 293-569 21-271 (303)
141 2eue_A Carbon catabolite derep 100.0 7.9E-40 2.7E-44 328.9 22.0 246 294-568 13-262 (275)
142 3kk8_A Calcium/calmodulin depe 100.0 1.4E-39 4.8E-44 328.6 23.8 252 293-568 5-261 (284)
143 2a2a_A Death-associated protei 100.0 1.3E-39 4.5E-44 335.1 24.0 252 293-568 11-272 (321)
144 4fvq_A Tyrosine-protein kinase 100.0 1.8E-40 6.1E-45 336.1 17.2 253 293-576 7-276 (289)
145 3dls_A PAS domain-containing s 100.0 1.6E-40 5.4E-45 343.9 17.1 244 292-569 22-275 (335)
146 3g2f_A Bone morphogenetic prot 100.0 9.2E-41 3.2E-45 345.8 15.3 268 292-573 11-316 (336)
147 1u5q_A Serine/threonine protei 100.0 1.7E-40 6E-45 345.2 17.4 248 293-569 53-306 (348)
148 3e7e_A HBUB1, BUB1A, mitotic c 100.0 8.1E-40 2.8E-44 342.9 22.6 254 290-573 61-337 (365)
149 3fdn_A Serine/threonine-protei 100.0 1.9E-40 6.5E-45 334.2 16.5 248 292-568 7-257 (279)
150 2i0e_A Protein kinase C-beta I 100.0 1.7E-40 5.7E-45 345.5 16.2 246 291-563 17-266 (353)
151 2y94_A 5'-AMP-activated protei 100.0 3.3E-40 1.1E-44 355.8 18.8 248 293-568 15-266 (476)
152 1vzo_A Ribosomal protein S6 ki 100.0 9.6E-41 3.3E-45 348.5 14.1 255 293-569 53-322 (355)
153 3c4z_A Rhodopsin kinase; Ser/T 100.0 4E-40 1.4E-44 359.2 19.5 254 292-564 183-439 (543)
154 1x8b_A WEE1HU, WEE1-like prote 100.0 2.1E-40 7E-45 334.9 15.9 247 293-568 10-279 (289)
155 3cok_A Serine/threonine-protei 100.0 3.5E-40 1.2E-44 332.0 17.4 250 293-568 10-262 (278)
156 4aaa_A Cyclin-dependent kinase 100.0 9.1E-40 3.1E-44 337.8 21.0 264 293-568 24-306 (331)
157 1byg_A CSK, protein (C-termina 100.0 1.9E-40 6.4E-45 334.1 15.4 251 292-573 19-271 (278)
158 4fl3_A Tyrosine-protein kinase 100.0 2.1E-40 7.2E-45 370.4 17.3 247 300-572 375-628 (635)
159 3eqc_A Dual specificity mitoge 100.0 1.2E-40 4.2E-45 348.4 14.4 268 292-568 31-324 (360)
160 3oz6_A Mitogen-activated prote 100.0 1.6E-39 5.5E-44 343.5 22.8 202 292-502 7-234 (388)
161 3g33_A Cell division protein k 100.0 5.3E-40 1.8E-44 335.9 18.4 266 291-568 6-296 (308)
162 2x4f_A Myosin light chain kina 100.0 1.2E-39 4.1E-44 342.1 21.5 247 298-568 93-342 (373)
163 2r5t_A Serine/threonine-protei 100.0 1.3E-40 4.5E-45 348.8 14.0 258 293-577 37-298 (373)
164 4ejn_A RAC-alpha serine/threon 100.0 3E-40 1E-44 355.6 17.0 250 292-568 146-404 (446)
165 2acx_A G protein-coupled recep 100.0 5.7E-40 2E-44 358.8 19.3 255 292-568 182-444 (576)
166 2a19_B Interferon-induced, dou 100.0 2.7E-40 9.3E-45 333.6 15.5 248 292-574 9-273 (284)
167 2w1i_A JAK2; chromosomal rearr 100.0 7.1E-40 2.4E-44 337.9 18.8 266 292-573 39-320 (326)
168 1nxk_A MAP kinase-activated pr 100.0 1.6E-39 5.4E-44 344.4 21.8 252 294-569 61-322 (400)
169 3f3z_A Calcium/calmodulin-depe 100.0 9.1E-40 3.1E-44 328.8 18.9 247 292-568 7-261 (277)
170 1u46_A ACK-1, activated CDC42 100.0 2.7E-40 9.3E-45 334.9 15.2 260 292-575 16-284 (291)
171 2ac3_A MAP kinase-interacting 100.0 4.6E-40 1.6E-44 337.6 16.9 256 294-568 12-295 (316)
172 3mtl_A Cell division protein k 100.0 2.3E-40 7.7E-45 341.3 14.6 262 294-568 2-281 (324)
173 3ttj_A Mitogen-activated prote 100.0 2.5E-39 8.4E-44 349.2 23.3 260 293-568 61-355 (464)
174 3fme_A Dual specificity mitoge 100.0 3E-40 1E-44 334.4 15.1 256 292-568 5-266 (290)
175 3bhy_A Death-associated protei 100.0 3.6E-39 1.2E-43 325.4 22.6 252 293-568 4-265 (283)
176 3byv_A Rhoptry kinase; malaria 100.0 9.9E-41 3.4E-45 351.4 11.5 244 293-568 72-359 (377)
177 3nsz_A CK II alpha, casein kin 100.0 3.7E-39 1.3E-43 332.9 22.7 257 293-568 35-319 (330)
178 2qr7_A Ribosomal protein S6 ki 100.0 4.7E-40 1.6E-44 341.1 15.9 252 292-568 20-277 (342)
179 1t4h_A Serine/threonine-protei 100.0 1.1E-39 3.9E-44 330.5 17.9 248 294-568 26-282 (290)
180 3an0_A Dual specificity mitoge 100.0 4.5E-40 1.5E-44 341.4 15.3 257 291-568 48-310 (340)
181 3mi9_A Cell division protein k 100.0 4.5E-39 1.5E-43 335.4 22.9 264 293-568 16-311 (351)
182 3rp9_A Mitogen-activated prote 100.0 2.8E-39 9.6E-44 349.3 21.9 195 293-495 52-280 (458)
183 3i6u_A CDS1, serine/threonine- 100.0 1.8E-39 6.3E-44 346.2 20.1 254 291-568 132-399 (419)
184 2vwi_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45 339.5 10.3 267 290-568 11-287 (303)
185 2rku_A Serine/threonine-protei 100.0 3.1E-39 1.1E-43 327.9 20.6 249 293-568 14-265 (294)
186 2vgo_A Serine/threonine-protei 100.0 1.2E-39 4.2E-44 329.1 17.5 247 293-568 13-262 (284)
187 2j0j_A Focal adhesion kinase 1 100.0 7.8E-40 2.7E-44 367.1 17.6 261 288-573 384-649 (656)
188 3eb0_A Putative uncharacterize 100.0 1.1E-39 3.7E-44 344.2 17.5 264 290-568 3-321 (383)
189 3lm5_A Serine/threonine-protei 100.0 1.5E-39 5.3E-44 335.5 18.2 259 288-568 22-287 (327)
190 1cm8_A Phosphorylated MAP kina 100.0 4.9E-39 1.7E-43 336.9 22.2 258 293-568 24-307 (367)
191 3ll6_A Cyclin G-associated kin 100.0 7E-40 2.4E-44 338.9 15.5 256 291-573 25-306 (337)
192 2owb_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 334.2 20.1 249 293-568 40-291 (335)
193 2y7j_A Phosphorylase B kinase 100.0 1.6E-38 5.4E-43 332.9 25.4 259 286-568 86-359 (365)
194 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.5E-39 5.2E-44 335.8 17.1 265 291-568 31-318 (329)
195 1ua2_A CAK, cell division prot 100.0 4.3E-39 1.5E-43 334.8 20.6 266 292-569 8-292 (346)
196 3q60_A ROP5B; pseudokinase, tr 100.0 3.9E-40 1.3E-44 346.1 12.7 255 293-568 61-352 (371)
197 2clq_A Mitogen-activated prote 100.0 3.9E-39 1.3E-43 327.1 19.7 252 295-568 23-278 (295)
198 3pg1_A Mitogen-activated prote 100.0 1.2E-39 4E-44 341.2 16.2 270 286-568 14-316 (362)
199 3sv0_A Casein kinase I-like; t 100.0 1.6E-38 5.5E-43 343.2 25.2 260 293-573 6-276 (483)
200 2jam_A Calcium/calmodulin-depe 100.0 2.9E-39 1E-43 329.8 18.2 255 292-572 7-267 (304)
201 3qyz_A Mitogen-activated prote 100.0 1.3E-38 4.3E-43 333.7 23.2 263 293-568 26-313 (364)
202 3n9x_A Phosphotransferase; mal 100.0 3.5E-39 1.2E-43 345.6 19.0 200 293-500 25-253 (432)
203 2j7t_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 327.9 18.8 253 292-568 17-275 (302)
204 3mwu_A Calmodulin-domain prote 100.0 9.9E-39 3.4E-43 347.5 22.7 253 292-569 20-277 (486)
205 2pml_X PFPK7, Ser/Thr protein 100.0 2.3E-39 7.7E-44 337.1 16.9 259 293-568 30-322 (348)
206 3com_A Serine/threonine-protei 100.0 1.8E-38 6.3E-43 325.3 23.4 252 291-568 26-278 (314)
207 1wak_A Serine/threonine-protei 100.0 1E-38 3.4E-43 338.1 22.0 265 293-568 36-391 (397)
208 3q5i_A Protein kinase; CDPK, m 100.0 1.6E-38 5.4E-43 347.4 24.0 252 292-568 34-301 (504)
209 2x7f_A TRAF2 and NCK-interacti 100.0 7.1E-40 2.4E-44 337.7 12.2 257 287-568 17-286 (326)
210 2r3i_A Cell division protein k 100.0 7.6E-39 2.6E-43 325.7 19.5 264 294-568 3-283 (299)
211 3lij_A Calcium/calmodulin depe 100.0 1.5E-38 5E-43 346.8 22.8 251 293-568 36-291 (494)
212 3nyv_A Calmodulin-domain prote 100.0 6.3E-39 2.2E-43 349.0 19.9 252 292-568 24-281 (484)
213 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.2E-40 1.8E-44 337.5 10.6 262 287-574 26-301 (319)
214 2h6d_A 5'-AMP-activated protei 100.0 8.7E-39 3E-43 321.4 19.4 249 292-568 9-261 (276)
215 2b9h_A MAP kinase FUS3, mitoge 100.0 1.9E-38 6.5E-43 330.8 22.0 263 293-568 10-305 (353)
216 4e7w_A Glycogen synthase kinas 100.0 2.2E-39 7.5E-44 342.9 14.9 261 293-568 39-321 (394)
217 3cek_A Dual specificity protei 100.0 6.4E-39 2.2E-43 328.7 17.9 254 290-568 24-292 (313)
218 2ycf_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 328.0 20.0 253 292-568 8-274 (322)
219 3kvw_A DYRK2, dual specificity 100.0 8.9E-39 3.1E-43 341.8 19.4 198 293-502 96-302 (429)
220 1j1b_A Glycogen synthase kinas 100.0 4E-39 1.4E-43 343.7 16.6 260 294-568 54-336 (420)
221 3pfq_A PKC-B, PKC-beta, protei 100.0 4.4E-39 1.5E-43 362.1 17.7 246 291-563 338-587 (674)
222 3e3p_A Protein kinase, putativ 100.0 1.2E-38 4.2E-43 333.1 19.2 270 287-568 16-314 (360)
223 2fst_X Mitogen-activated prote 100.0 1.3E-38 4.6E-43 333.4 19.3 259 293-568 28-311 (367)
224 2wtk_C Serine/threonine-protei 100.0 5E-38 1.7E-42 320.6 23.1 251 293-568 4-263 (305)
225 2xrw_A Mitogen-activated prote 100.0 3.7E-38 1.3E-42 331.0 22.5 260 293-568 24-318 (371)
226 3rgf_A Cyclin-dependent kinase 100.0 1.2E-38 4E-43 338.8 18.9 268 294-568 20-333 (405)
227 1phk_A Phosphorylase kinase; g 100.0 2E-38 6.8E-43 322.4 19.7 253 292-568 15-283 (298)
228 1blx_A Cyclin-dependent kinase 100.0 4.1E-39 1.4E-43 331.9 14.2 265 292-568 9-296 (326)
229 4exu_A Mitogen-activated prote 100.0 5.4E-38 1.8E-42 329.7 21.5 258 293-568 41-323 (371)
230 2rio_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 338.1 19.9 252 295-568 16-295 (434)
231 1z57_A Dual specificity protei 100.0 6.4E-38 2.2E-42 324.3 21.5 259 293-568 13-328 (339)
232 3aln_A Dual specificity mitoge 100.0 1.5E-38 5.1E-43 328.1 15.9 256 292-568 20-285 (327)
233 1zy4_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 321.3 18.0 251 293-568 5-283 (303)
234 1q8y_A SR protein kinase; tran 100.0 7.4E-38 2.5E-42 328.8 20.5 265 293-568 18-333 (373)
235 2wei_A Calmodulin-domain prote 100.0 9.7E-38 3.3E-42 315.8 20.6 252 292-568 20-276 (287)
236 3coi_A Mitogen-activated prote 100.0 1.9E-37 6.4E-42 323.4 22.6 257 293-568 23-305 (353)
237 2i6l_A Mitogen-activated prote 100.0 6.6E-38 2.2E-42 321.7 18.7 262 293-568 10-305 (320)
238 2vx3_A Dual specificity tyrosi 100.0 2.2E-37 7.4E-42 326.5 23.1 202 291-502 51-261 (382)
239 3a99_A Proto-oncogene serine/t 100.0 6.1E-39 2.1E-43 330.0 10.2 247 287-568 36-293 (320)
240 2iwi_A Serine/threonine-protei 100.0 8.3E-38 2.8E-42 320.2 17.8 247 287-568 24-283 (312)
241 3fhr_A MAP kinase-activated pr 100.0 7.4E-38 2.5E-42 324.1 16.8 253 292-568 26-287 (336)
242 2dyl_A Dual specificity mitoge 100.0 4E-37 1.4E-41 315.7 20.6 252 293-568 24-283 (318)
243 2eu9_A Dual specificity protei 100.0 4.4E-37 1.5E-41 320.3 21.0 259 293-568 18-333 (355)
244 3p23_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 332.2 15.9 250 292-568 22-283 (432)
245 3qa8_A MGC80376 protein; kinas 100.0 6.8E-38 2.3E-42 345.7 13.5 260 293-565 13-294 (676)
246 2pzi_A Probable serine/threoni 100.0 3.6E-37 1.2E-41 348.6 16.6 239 293-572 79-325 (681)
247 3uqc_A Probable conserved tran 100.0 5.4E-36 1.8E-40 302.7 17.8 231 293-575 30-265 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 2.4E-36 8.3E-41 321.5 12.4 244 293-568 77-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0 8E-35 2.7E-39 296.2 21.8 226 294-568 17-256 (299)
250 2vuw_A Serine/threonine-protei 100.0 4.1E-36 1.4E-40 311.0 12.0 243 292-567 18-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.7E-29 5.8E-34 278.2 5.9 186 301-498 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 6.6E-27 2.3E-31 256.1 9.8 186 296-499 338-538 (540)
253 1ogq_A PGIP-2, polygalacturona 99.9 6.5E-26 2.2E-30 231.9 10.6 171 34-206 5-187 (313)
254 1zar_A RIO2 kinase; serine kin 99.9 1.4E-23 4.6E-28 210.9 11.3 152 288-472 84-252 (282)
255 4ecn_A Leucine-rich repeat pro 99.9 6.1E-23 2.1E-27 235.0 9.0 168 34-206 268-561 (876)
256 4eco_A Uncharacterized protein 99.9 1.9E-22 6.5E-27 226.2 10.5 170 35-206 30-318 (636)
257 3rgz_A Protein brassinosteroid 99.9 2.3E-22 7.7E-27 230.6 9.0 169 34-205 11-212 (768)
258 3e6j_A Variable lymphocyte rec 99.8 6.3E-21 2.1E-25 185.6 11.6 149 61-210 15-176 (229)
259 2v9t_B SLIT homolog 2 protein 99.8 1.1E-20 3.7E-25 182.7 10.0 147 65-211 11-170 (220)
260 4fcg_A Uncharacterized protein 99.8 3E-21 1E-25 198.5 4.7 169 34-206 26-219 (328)
261 2v70_A SLIT-2, SLIT homolog 2 99.8 2.6E-20 8.8E-25 180.1 9.1 147 65-211 11-171 (220)
262 2o6s_A Variable lymphocyte rec 99.8 2.3E-19 7.9E-24 171.7 11.8 147 64-210 6-165 (208)
263 1zth_A RIO1 serine protein kin 99.8 3.6E-19 1.2E-23 176.4 12.3 137 296-448 49-219 (258)
264 3rgz_A Protein brassinosteroid 99.8 1.7E-19 5.7E-24 206.8 9.3 122 98-220 630-753 (768)
265 1w8a_A SLIT protein; signaling 99.8 1.3E-18 4.3E-23 164.4 11.2 125 65-189 8-143 (192)
266 3m19_A Variable lymphocyte rec 99.8 5.2E-18 1.8E-22 167.4 13.5 134 75-208 58-194 (251)
267 3oja_A Leucine-rich immune mol 99.8 7.3E-20 2.5E-24 198.4 0.1 141 65-209 109-253 (487)
268 1p9a_G Platelet glycoprotein I 99.8 8.3E-19 2.8E-23 176.9 7.9 135 75-211 76-213 (290)
269 2o6q_A Variable lymphocyte rec 99.7 3.2E-18 1.1E-22 170.8 9.3 136 75-210 84-222 (270)
270 3m19_A Variable lymphocyte rec 99.7 9E-18 3.1E-22 165.7 11.1 131 76-206 35-168 (251)
271 1w8a_A SLIT protein; signaling 99.7 5.8E-18 2E-22 159.8 9.2 130 79-211 11-144 (192)
272 1ogq_A PGIP-2, polygalacturona 99.7 2.1E-18 7.2E-23 176.0 5.8 136 77-215 175-312 (313)
273 2wfh_A SLIT homolog 2 protein 99.7 1E-17 3.6E-22 158.1 9.5 128 79-211 13-144 (193)
274 3rfs_A Internalin B, repeat mo 99.7 2.1E-17 7.1E-22 165.1 11.8 136 75-210 84-222 (272)
275 1ozn_A Reticulon 4 receptor; N 99.7 4.4E-18 1.5E-22 171.2 6.8 137 75-211 104-243 (285)
276 2o6r_A Variable lymphocyte rec 99.7 2.4E-17 8.3E-22 153.3 9.3 125 65-189 7-141 (177)
277 2o6q_A Variable lymphocyte rec 99.7 5.4E-17 1.9E-21 161.9 10.9 129 77-205 38-169 (270)
278 4gyi_A RIO2 kinase; protein ki 99.7 3.4E-17 1.2E-21 168.7 8.5 141 295-448 96-265 (397)
279 2xot_A Amphoterin-induced prot 99.7 1.9E-17 6.3E-22 172.5 6.6 134 75-210 63-206 (361)
280 4g8a_A TOLL-like receptor 4; l 99.7 5.7E-17 2E-21 181.5 9.9 159 50-208 9-188 (635)
281 3zyj_A Leucine-rich repeat-con 99.7 3.5E-17 1.2E-21 175.2 6.2 134 76-211 160-297 (440)
282 2z66_A Variable lymphocyte rec 99.7 6.9E-17 2.4E-21 164.1 7.8 135 76-210 126-265 (306)
283 3v47_A TOLL-like receptor 5B a 99.7 8.8E-17 3E-21 172.8 8.7 135 76-210 275-412 (455)
284 2xot_A Amphoterin-induced prot 99.7 1.1E-16 3.6E-21 166.8 8.9 141 65-206 18-176 (361)
285 2wfh_A SLIT homolog 2 protein 99.7 1.8E-16 6E-21 149.7 9.2 123 65-188 10-142 (193)
286 3zyi_A Leucine-rich repeat-con 99.6 6.4E-17 2.2E-21 173.8 6.0 134 76-211 171-308 (452)
287 2v70_A SLIT-2, SLIT homolog 2 99.6 2.8E-16 9.7E-21 151.6 9.7 115 75-189 56-170 (220)
288 4g8a_A TOLL-like receptor 4; l 99.6 1.4E-16 4.7E-21 178.3 8.3 137 75-211 444-585 (635)
289 2z62_A TOLL-like receptor 4, v 99.6 1.3E-16 4.5E-21 159.5 6.1 134 77-210 77-241 (276)
290 2o6r_A Variable lymphocyte rec 99.6 5.3E-16 1.8E-20 144.2 9.7 130 78-210 9-141 (177)
291 4fcg_A Uncharacterized protein 99.6 3.8E-16 1.3E-20 160.3 9.3 130 75-206 149-290 (328)
292 2z62_A TOLL-like receptor 4, v 99.6 8.1E-16 2.8E-20 153.8 11.3 130 77-206 29-162 (276)
293 3vq2_A TLR4, TOLL-like recepto 99.6 2E-16 6.9E-21 176.4 7.5 136 75-211 423-563 (606)
294 1ozn_A Reticulon 4 receptor; N 99.6 2.5E-16 8.4E-21 158.4 7.3 131 76-206 56-190 (285)
295 2ell_A Acidic leucine-rich nuc 99.6 3.6E-16 1.2E-20 144.0 7.3 127 76-206 24-160 (168)
296 3vq2_A TLR4, TOLL-like recepto 99.6 9.8E-16 3.4E-20 170.8 11.1 146 62-207 4-167 (606)
297 2v9t_B SLIT homolog 2 protein 99.6 1.3E-15 4.4E-20 146.9 9.6 113 75-187 55-167 (220)
298 3oja_B Anopheles plasmodium-re 99.6 1.3E-15 4.5E-20 169.4 11.1 153 53-206 8-184 (597)
299 2je0_A Acidic leucine-rich nuc 99.6 3.4E-16 1.2E-20 141.1 4.5 121 76-198 17-142 (149)
300 3v47_A TOLL-like receptor 5B a 99.6 8.3E-16 2.8E-20 165.1 8.3 145 63-207 6-168 (455)
301 2z81_A CD282 antigen, TOLL-lik 99.6 3.3E-16 1.1E-20 172.5 5.0 142 64-206 3-161 (549)
302 2xwt_C Thyrotropin receptor; s 99.6 8.5E-16 2.9E-20 150.2 7.2 129 76-206 31-169 (239)
303 3rfs_A Internalin B, repeat mo 99.6 3.4E-15 1.2E-19 148.9 11.6 131 75-207 62-195 (272)
304 3e6j_A Variable lymphocyte rec 99.6 4.4E-15 1.5E-19 144.1 11.7 114 75-189 63-176 (229)
305 3j0a_A TOLL-like receptor 5; m 99.6 2.5E-16 8.7E-21 182.3 2.9 135 75-211 425-565 (844)
306 1p9a_G Platelet glycoprotein I 99.6 5.3E-15 1.8E-19 148.9 11.2 127 76-206 55-185 (290)
307 2o6s_A Variable lymphocyte rec 99.6 4.9E-15 1.7E-19 141.5 10.4 127 75-205 51-177 (208)
308 3t6q_A CD180 antigen; protein- 99.6 2E-15 6.7E-20 168.4 8.3 134 76-210 425-564 (606)
309 2id5_A Lingo-1, leucine rich r 99.6 2.9E-15 9.9E-20 162.0 9.4 141 66-206 12-165 (477)
310 1ziw_A TOLL-like receptor 3; i 99.6 3.1E-15 1E-19 169.2 9.9 137 75-211 479-627 (680)
311 2z80_A TOLL-like receptor 2, v 99.6 1.2E-15 4.1E-20 158.3 5.9 143 62-206 27-187 (353)
312 3g39_A Variable lymphocyte rec 99.6 4.6E-15 1.6E-19 136.9 9.2 108 79-189 12-119 (170)
313 3o6n_A APL1; leucine-rich repe 99.6 2.6E-15 8.9E-20 158.0 8.3 151 54-206 3-178 (390)
314 2r9u_A Variable lymphocyte rec 99.6 5.4E-15 1.9E-19 136.9 9.0 110 79-192 15-124 (174)
315 2id5_A Lingo-1, leucine rich r 99.6 1E-15 3.4E-20 165.7 4.7 136 76-211 200-338 (477)
316 3o53_A Protein LRIM1, AGAP0063 99.6 2.4E-15 8.1E-20 153.6 6.8 138 68-209 112-253 (317)
317 3t6q_A CD180 antigen; protein- 99.6 4.5E-15 1.5E-19 165.5 9.4 132 76-207 33-167 (606)
318 4b8c_D Glucose-repressible alc 99.6 2.6E-15 8.9E-20 170.2 7.5 112 77-192 225-336 (727)
319 3zyi_A Leucine-rich repeat-con 99.6 7.7E-15 2.6E-19 157.5 10.7 142 67-208 56-211 (452)
320 2z63_A TOLL-like receptor 4, v 99.6 3.6E-15 1.2E-19 164.9 8.2 136 75-210 395-535 (570)
321 2z7x_B TOLL-like receptor 1, v 99.5 3.1E-15 1.1E-19 163.6 7.3 134 75-210 323-485 (520)
322 3j0a_A TOLL-like receptor 5; m 99.5 4.4E-15 1.5E-19 171.9 8.7 141 65-206 14-161 (844)
323 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 5.9E-15 2E-19 163.0 9.0 134 75-210 352-514 (562)
324 2ft3_A Biglycan; proteoglycan, 99.5 1.1E-14 3.9E-19 149.6 10.5 140 65-207 33-186 (332)
325 1xku_A Decorin; proteoglycan, 99.5 4E-15 1.4E-19 152.8 6.7 127 76-206 145-276 (330)
326 4ezg_A Putative uncharacterize 99.5 4.3E-15 1.5E-19 140.7 6.0 124 77-205 45-171 (197)
327 2z66_A Variable lymphocyte rec 99.5 7.9E-15 2.7E-19 148.9 8.3 128 77-205 79-211 (306)
328 3o6n_A APL1; leucine-rich repe 99.5 1.6E-14 5.6E-19 151.8 10.6 132 75-206 68-199 (390)
329 1ziw_A TOLL-like receptor 3; i 99.5 1.4E-14 4.9E-19 163.7 10.7 131 76-206 25-158 (680)
330 3oja_B Anopheles plasmodium-re 99.5 4.2E-15 1.4E-19 165.3 6.0 131 76-210 232-362 (597)
331 4eco_A Uncharacterized protein 99.5 2.5E-15 8.5E-20 168.3 4.1 130 75-206 205-366 (636)
332 4b8c_D Glucose-repressible alc 99.5 3.6E-15 1.2E-19 169.0 5.2 170 34-207 131-330 (727)
333 3zyj_A Leucine-rich repeat-con 99.5 1.8E-14 6.1E-19 154.2 10.3 141 67-207 45-199 (440)
334 1a9n_A U2A', U2A'; complex (nu 99.5 8.5E-15 2.9E-19 135.9 6.7 125 75-205 18-152 (176)
335 1wwl_A Monocyte differentiatio 99.5 2.9E-15 9.8E-20 152.7 3.5 132 75-207 94-242 (312)
336 4ezg_A Putative uncharacterize 99.5 1.1E-14 3.6E-19 137.9 6.9 126 75-205 65-193 (197)
337 1dce_A Protein (RAB geranylger 99.5 1.3E-14 4.5E-19 159.5 8.7 108 77-189 442-550 (567)
338 2ft3_A Biglycan; proteoglycan, 99.5 1.7E-14 5.8E-19 148.3 8.8 107 76-186 123-231 (332)
339 3g39_A Variable lymphocyte rec 99.5 2.1E-14 7.3E-19 132.4 8.5 106 102-210 11-119 (170)
340 1wwl_A Monocyte differentiatio 99.5 5.6E-15 1.9E-19 150.5 4.7 131 75-206 120-266 (312)
341 4glp_A Monocyte differentiatio 99.5 1.3E-14 4.4E-19 147.7 7.3 131 75-207 144-286 (310)
342 2z63_A TOLL-like receptor 4, v 99.5 3.1E-14 1.1E-18 157.4 10.8 131 76-206 28-162 (570)
343 1xku_A Decorin; proteoglycan, 99.5 3E-14 1E-18 146.2 9.0 139 65-206 31-184 (330)
344 2ifg_A High affinity nerve gro 99.5 3.3E-14 1.1E-18 147.0 9.2 132 65-210 8-145 (347)
345 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 1.6E-14 5.5E-19 159.5 6.6 127 76-205 52-181 (562)
346 2r9u_A Variable lymphocyte rec 99.5 4.6E-14 1.6E-18 130.6 8.5 105 103-210 15-122 (174)
347 2z80_A TOLL-like receptor 2, v 99.5 2.4E-14 8.1E-19 148.5 7.2 130 75-205 75-210 (353)
348 2ell_A Acidic leucine-rich nuc 99.5 2.6E-14 8.8E-19 131.5 5.8 112 75-191 48-165 (168)
349 4glp_A Monocyte differentiatio 99.5 2.1E-14 7.1E-19 146.1 5.5 132 75-207 116-265 (310)
350 4ecn_A Leucine-rich repeat pro 99.5 1.5E-14 5E-19 165.8 4.8 130 74-206 446-608 (876)
351 3cvr_A Invasion plasmid antige 99.5 1.9E-14 6.5E-19 157.5 5.5 136 54-207 33-174 (571)
352 2xwt_C Thyrotropin receptor; s 99.5 3E-14 1E-18 139.1 6.4 127 75-204 54-190 (239)
353 2z7x_B TOLL-like receptor 1, v 99.5 1.5E-14 5E-19 158.3 4.2 127 76-205 21-150 (520)
354 2z81_A CD282 antigen, TOLL-lik 99.4 7.5E-14 2.6E-18 153.6 7.2 130 75-204 49-183 (549)
355 3oja_A Leucine-rich immune mol 99.4 3.8E-14 1.3E-18 153.4 4.5 122 75-206 57-182 (487)
356 1h6t_A Internalin B; cell adhe 99.4 1.8E-13 6.3E-18 137.7 9.0 125 75-207 67-192 (291)
357 1xeu_A Internalin C; cellular 99.4 1.6E-13 5.5E-18 136.0 7.3 100 77-185 42-141 (263)
358 1h6u_A Internalin H; cell adhe 99.4 1.5E-13 5.1E-18 139.6 7.0 128 74-209 83-211 (308)
359 1xeu_A Internalin C; cellular 99.4 4.2E-13 1.4E-17 133.0 9.6 124 75-208 62-187 (263)
360 2je0_A Acidic leucine-rich nuc 99.4 7.9E-14 2.7E-18 125.4 3.7 105 75-181 41-149 (149)
361 1h6t_A Internalin B; cell adhe 99.4 2.5E-13 8.6E-18 136.7 7.5 125 74-207 88-214 (291)
362 2ifg_A High affinity nerve gro 99.4 1.8E-13 6.2E-18 141.4 6.3 105 103-210 11-120 (347)
363 1h6u_A Internalin H; cell adhe 99.4 5.5E-13 1.9E-17 135.4 9.5 125 75-208 62-188 (308)
364 1a9n_A U2A', U2A'; complex (nu 99.4 9.7E-14 3.3E-18 128.7 3.1 106 76-185 42-153 (176)
365 4fmz_A Internalin; leucine ric 99.4 3.4E-13 1.1E-17 139.3 7.0 125 76-208 199-326 (347)
366 1m9s_A Internalin B; cell inva 99.4 7E-13 2.4E-17 146.6 8.9 122 76-205 65-187 (605)
367 1ds9_A Outer arm dynein; leuci 99.4 2.7E-15 9.4E-20 142.1 -9.5 86 95-185 43-128 (198)
368 3o53_A Protein LRIM1, AGAP0063 99.3 3.4E-13 1.2E-17 137.6 4.5 125 75-203 143-272 (317)
369 1m9s_A Internalin B; cell inva 99.3 1.3E-12 4.3E-17 144.6 8.6 125 74-207 85-211 (605)
370 4ay9_X Follicle-stimulating ho 99.3 1.5E-12 5.1E-17 134.7 8.5 141 65-206 9-167 (350)
371 3g06_A SSPH2 (leucine-rich rep 99.3 3.8E-13 1.3E-17 149.0 3.4 137 53-206 11-154 (622)
372 1o6v_A Internalin A; bacterial 99.3 1.7E-12 6E-17 139.7 8.1 122 76-206 243-366 (466)
373 3cvr_A Invasion plasmid antige 99.3 2.9E-12 9.8E-17 140.3 9.6 115 75-206 99-220 (571)
374 1ds9_A Outer arm dynein; leuci 99.3 1.7E-14 6E-19 136.5 -7.9 125 75-205 47-184 (198)
375 3bz5_A Internalin-J, INLJ; leu 99.3 7.1E-12 2.4E-16 134.3 9.4 124 74-206 168-299 (457)
376 1o6v_A Internalin A; bacterial 99.3 7.3E-12 2.5E-16 134.8 8.9 126 75-208 220-346 (466)
377 3bz5_A Internalin-J, INLJ; leu 99.3 1.3E-11 4.3E-16 132.4 10.5 123 73-207 124-247 (457)
378 1dce_A Protein (RAB geranylger 99.2 6.5E-12 2.2E-16 138.0 8.1 104 101-209 442-549 (567)
379 4fmz_A Internalin; leucine ric 99.2 9E-12 3.1E-16 128.5 8.4 122 76-206 177-300 (347)
380 3tm0_A Aminoglycoside 3'-phosp 99.2 3.7E-11 1.3E-15 118.8 12.4 145 291-446 11-212 (263)
381 1jl5_A Outer protein YOPM; leu 99.2 1.6E-11 5.4E-16 131.5 10.3 118 76-206 131-250 (454)
382 2ca6_A RAN GTPase-activating p 99.2 4.8E-13 1.6E-17 140.4 -3.1 129 77-205 160-315 (386)
383 1nd4_A Aminoglycoside 3'-phosp 99.2 5.7E-11 1.9E-15 117.0 11.2 137 295-447 21-214 (264)
384 2ast_B S-phase kinase-associat 99.2 4.2E-13 1.4E-17 137.9 -4.5 128 76-204 70-206 (336)
385 3goz_A Leucine-rich repeat-con 99.2 1.4E-12 4.9E-17 135.5 -0.7 129 77-205 23-179 (362)
386 1jl5_A Outer protein YOPM; leu 99.2 5.5E-11 1.9E-15 127.3 10.2 120 75-207 152-271 (454)
387 3g06_A SSPH2 (leucine-rich rep 99.2 6.1E-11 2.1E-15 131.3 10.1 111 77-204 62-172 (622)
388 2ast_B S-phase kinase-associat 99.2 1.4E-12 4.9E-17 133.8 -2.8 131 75-205 92-234 (336)
389 2ca6_A RAN GTPase-activating p 99.1 1.3E-12 4.5E-17 137.0 -3.4 130 76-205 94-256 (386)
390 3goz_A Leucine-rich repeat-con 99.1 4.5E-12 1.5E-16 131.8 -0.4 127 80-206 2-151 (362)
391 3dxp_A Putative acyl-COA dehyd 99.1 6.7E-10 2.3E-14 115.1 13.0 143 298-447 42-248 (359)
392 4ay9_X Follicle-stimulating ho 99.0 3.7E-10 1.3E-14 116.6 7.8 170 21-203 34-233 (350)
393 1z7x_W Ribonuclease inhibitor; 99.0 1.5E-11 5E-16 132.0 -5.0 132 75-206 255-411 (461)
394 3sg8_A APH(2'')-ID; antibiotic 98.9 1.2E-09 4.1E-14 110.4 8.1 186 299-499 25-287 (304)
395 1z7x_W Ribonuclease inhibitor; 98.9 1.6E-11 5.3E-16 131.9 -6.3 132 75-206 226-383 (461)
396 3un9_A NLR family member X1; l 98.8 1.2E-10 4.1E-15 121.1 -5.6 130 76-205 101-251 (372)
397 3rw6_A Nuclear RNA export fact 98.7 2.1E-10 7.1E-15 112.5 -4.9 99 99-200 140-255 (267)
398 3rw6_A Nuclear RNA export fact 98.6 2.8E-09 9.6E-14 104.5 -0.5 80 97-178 167-257 (267)
399 3un9_A NLR family member X1; l 98.6 1.4E-09 4.9E-14 112.9 -3.0 117 76-192 126-259 (372)
400 3sb4_A Hypothetical leucine ri 98.6 4.2E-08 1.4E-12 100.1 7.9 81 123-206 225-310 (329)
401 3r70_A Aminoglycoside phosphot 98.6 3.1E-07 1.1E-11 93.3 13.9 137 295-448 38-238 (320)
402 3sb4_A Hypothetical leucine ri 98.6 4.1E-08 1.4E-12 100.2 6.3 85 99-185 225-310 (329)
403 3d1u_A Putative fructosamine-3 98.5 9.9E-07 3.4E-11 88.0 12.6 143 297-446 18-215 (288)
404 1io0_A Tropomodulin; LRR prote 98.4 1.2E-08 4.2E-13 94.9 -2.8 111 75-185 35-164 (185)
405 4gkh_A Aminoglycoside 3'-phosp 98.4 2E-06 7E-11 84.8 12.9 135 301-447 31-223 (272)
406 3tdw_A Gentamicin resistance p 98.3 3.8E-06 1.3E-10 84.6 13.7 136 299-447 24-224 (306)
407 3ogk_B Coronatine-insensitive 98.3 7.7E-08 2.6E-12 106.4 0.7 127 76-204 164-304 (592)
408 3ogk_B Coronatine-insensitive 98.3 1.5E-07 5.3E-12 104.0 1.7 125 75-201 191-326 (592)
409 3ovc_A Hygromycin-B 4-O-kinase 98.2 7.1E-06 2.4E-10 84.6 12.8 145 297-448 44-244 (362)
410 3ats_A Putative uncharacterize 98.2 4.3E-06 1.5E-10 86.1 9.4 82 299-380 25-122 (357)
411 2p1m_B Transport inhibitor res 98.1 3.3E-08 1.1E-12 109.3 -7.6 128 77-205 373-518 (594)
412 1io0_A Tropomodulin; LRR prote 98.1 6.4E-08 2.2E-12 90.0 -5.1 116 90-205 26-163 (185)
413 2ra8_A Uncharacterized protein 98.1 1.8E-07 6E-12 96.5 -3.3 128 75-205 171-319 (362)
414 2q83_A YTAA protein; 2635576, 98.0 2.5E-05 8.6E-10 79.6 11.0 141 300-446 38-251 (346)
415 2p1m_B Transport inhibitor res 98.0 3.2E-07 1.1E-11 101.4 -3.6 116 75-193 104-232 (594)
416 4fdw_A Leucine rich hypothetic 97.9 9.5E-06 3.2E-10 84.9 6.9 124 76-205 226-357 (401)
417 2olc_A MTR kinase, methylthior 97.9 4.4E-05 1.5E-09 79.7 12.1 76 299-376 35-120 (397)
418 2pyw_A Uncharacterized protein 97.9 4E-05 1.4E-09 80.7 10.1 80 416-496 231-313 (420)
419 2ra8_A Uncharacterized protein 97.9 2E-06 6.8E-11 88.6 -0.0 128 75-205 138-291 (362)
420 4fdw_A Leucine rich hypothetic 97.7 4.4E-05 1.5E-09 79.8 7.9 104 77-185 181-284 (401)
421 3jr1_A Putative fructosamine-3 97.7 0.00016 5.4E-09 72.6 11.7 140 298-443 40-232 (312)
422 3f7w_A Putative fructosamine-3 97.7 0.00012 3.9E-09 72.9 9.9 78 295-377 16-96 (288)
423 3e4g_A ATP synthase subunit S, 97.4 2.8E-05 9.4E-10 70.7 1.1 83 77-159 62-150 (176)
424 2ppq_A HSK, HK, homoserine kin 97.3 0.00073 2.5E-08 68.1 9.7 158 285-446 8-216 (322)
425 3csv_A Aminoglycoside phosphot 97.3 0.00091 3.1E-08 67.8 10.3 143 299-447 23-217 (333)
426 3e4g_A ATP synthase subunit S, 97.3 2.1E-05 7.1E-10 71.5 -1.8 91 93-183 54-150 (176)
427 1nw1_A Choline kinase (49.2 KD 97.2 0.00098 3.4E-08 70.1 10.4 73 299-378 78-159 (429)
428 3dxq_A Choline/ethanolamine ki 97.2 0.002 7E-08 64.2 11.3 71 299-378 23-95 (301)
429 3rfe_A Platelet glycoprotein I 97.1 0.00047 1.6E-08 59.5 4.9 56 80-137 12-68 (130)
430 1zyl_A Hypothetical protein YI 97.0 0.0044 1.5E-07 62.4 12.6 143 300-447 32-223 (328)
431 4gt6_A Cell surface protein; l 97.0 0.00073 2.5E-08 70.3 6.0 88 91-181 256-343 (394)
432 3rfe_A Platelet glycoprotein I 96.9 0.0013 4.5E-08 56.6 6.3 57 103-161 11-68 (130)
433 4h09_A Hypothetical leucine ri 96.8 0.0024 8.2E-08 65.9 8.6 102 77-181 218-319 (379)
434 3c5i_A Choline kinase; choline 96.8 0.0036 1.2E-07 64.4 9.9 74 299-378 38-121 (369)
435 1pgv_A TMD-1, tropomodulin TMD 96.8 0.0001 3.5E-09 68.2 -1.8 110 76-185 41-170 (197)
436 2qg7_A Ethanolamine kinase PV0 96.8 0.0079 2.7E-07 63.6 12.0 75 299-379 113-189 (458)
437 3feg_A Choline/ethanolamine ki 96.7 0.0082 2.8E-07 61.8 11.4 143 299-447 55-254 (379)
438 3i1a_A Spectinomycin phosphotr 96.7 0.0095 3.3E-07 60.4 11.7 31 417-447 206-236 (339)
439 4fs7_A Uncharacterized protein 96.6 0.0016 5.5E-08 67.7 5.1 114 77-198 277-390 (394)
440 4fs7_A Uncharacterized protein 96.5 0.0024 8.3E-08 66.3 5.6 114 76-197 253-367 (394)
441 4gt6_A Cell surface protein; l 96.4 0.002 6.7E-08 67.0 4.2 106 76-185 265-370 (394)
442 4h09_A Hypothetical leucine ri 96.2 0.0082 2.8E-07 61.8 7.7 100 77-179 241-340 (379)
443 2yle_A Protein spire homolog 1 96.1 0.018 6.1E-07 53.5 8.7 104 375-498 32-135 (229)
444 3f2s_A CK, chetk-alpha, cholin 95.6 0.036 1.2E-06 57.3 9.6 143 300-446 58-279 (401)
445 1pgv_A TMD-1, tropomodulin TMD 95.6 0.0011 3.8E-08 61.2 -1.8 89 95-183 36-137 (197)
446 3mes_A Choline kinase; malaria 95.0 0.078 2.7E-06 55.3 9.7 74 299-378 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.4 0.15 5.3E-06 52.7 6.2 29 419-447 246-280 (401)
448 4ann_A ESSB; membrane protein, 90.7 0.91 3.1E-05 42.0 8.8 116 349-500 43-158 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 86.6 0.12 4E-06 54.7 -0.3 62 297-361 145-214 (463)
450 4ano_A ESSB; membrane protein, 84.7 1.7 5.8E-05 40.4 6.5 115 349-500 48-163 (219)
451 2ks1_B Epidermal growth factor 77.2 0.14 4.7E-06 34.2 -2.6 25 232-256 13-37 (44)
452 2l2t_A Receptor tyrosine-prote 69.9 0.14 5E-06 34.0 -3.9 25 232-256 12-36 (44)
453 2lz0_A Uncharacterized protein 48.7 15 0.00052 29.2 3.7 39 117-156 13-51 (100)
454 2lz0_A Uncharacterized protein 35.3 64 0.0022 25.4 5.5 49 86-135 6-54 (100)
455 2k9y_A Ephrin type-A receptor 31.4 2.4 8.1E-05 27.7 -3.1 13 232-244 15-27 (41)
456 2l6w_A Beta-type platelet-deri 29.9 16 0.00056 23.2 0.0 26 232-257 10-35 (39)
457 3ls8_A Phosphatidylinositol 3- 20.9 5.5E+02 0.019 27.5 11.0 46 394-446 454-501 (614)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.3e-55 Score=446.41 Aligned_cols=259 Identities=22% Similarity=0.319 Sum_probs=213.3
Q ss_pred cCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.++++.+.||+|+||+||+|.+. +++.||||+++........++|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34566789999999999999963 468899999986665666789999999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCCC------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 368 LVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
+|||||++|+|.++|....+. ...+++..+.+|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 999999999999999653221 24589999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007073 436 EAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 513 (619)
++||+|||+|+.....+. ...+...||+.|||||++.++.|+.++|||||||++|||+| |+.||..... .
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-----~--- 254 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----Q--- 254 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-----H---
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-----H---
Confidence 999999999987644332 23345679999999999999999999999999999999999 8999864321 1
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+....+..... ...+.+.+..+.+|+.+||+.||++||||.||++.|+..
T Consensus 255 ~~~~~i~~~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 255 DVVEMIRNRQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHcCCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11222221111 112334456789999999999999999999999999874
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=6.2e-55 Score=441.38 Aligned_cols=259 Identities=24% Similarity=0.369 Sum_probs=212.3
Q ss_pred hcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
.++|.+.+.||+|+||+||+|++. +|+.||||+++.. +....++|.+|++++++++|||||+++|+|.+++..
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 357888899999999999999864 4788999999753 445678899999999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccC---------CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 007073 367 LLVYPFMQNLSVAYRLREIK---------PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEA 437 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 437 (619)
++|||||++|+|.++++... .....+++..+.+++.|||+||+|||++ +|+||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997642 2235699999999999999999999999 99999999999999999999
Q ss_pred EEcccccceeeccCCcce-eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHH
Q 007073 438 VVGDFGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDH 515 (619)
Q Consensus 438 kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 515 (619)
||+|||+|+......... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..... . +.
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-----~---~~ 239 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----N---EV 239 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----H---HH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----H---HH
Confidence 999999998765433322 233568999999999999999999999999999999999 8999964321 1 11
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.......... ..+...+.++.+|+.+||+.||++||||++|++.|++.
T Consensus 240 ~~~i~~~~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 240 IECITQGRVL----------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp HHHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHcCCCC----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 2222211111 12233456789999999999999999999999999864
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.2e-54 Score=443.30 Aligned_cols=259 Identities=25% Similarity=0.398 Sum_probs=206.9
Q ss_pred hcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
.++|.+.+.||+|+||+||+|++. +++.||||+++. .+....++|.+|++++++++|||||+++|+|.+++..
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC-CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 356777889999999999999864 478999999975 3455668899999999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCCC-----------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 367 LLVYPFMQNLSVAYRLREIKPG-----------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
++|||||++|+|.++++..... ...++|.++.+|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 9999999999999999764321 24589999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007073 436 EAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 513 (619)
.+||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||..... .
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-----~--- 267 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-----T--- 267 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-----H---
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-----H---
Confidence 999999999987644332 23345679999999999999999999999999999999999 8999964321 1
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+....+....++ ..+...+.++.+|+.+||+.||++||||.||++.|+.+
T Consensus 268 ~~~~~i~~g~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 268 EAIDCITQGREL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp HHHHHHHHTCCC----------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCC----------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 111222211111 12233446789999999999999999999999999874
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-54 Score=434.48 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=205.1
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
++..+++.+.+.||+|+||+||+|+++ ..||||+++... +....+.|.+|++++++++|||||+++|++.. +..++
T Consensus 32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence 345677888999999999999999975 369999987433 34456789999999999999999999998865 56899
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
|||||++|+|.++++... ..+++..+..|+.|||+||+|||++ +||||||||+|||+++++++||+|||+|+..
T Consensus 109 VmEy~~gGsL~~~l~~~~---~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp EEECCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred EEEcCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 999999999999997532 3489999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCC-cceeeeccccccccccccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 449 DVRK-TNVTTQVRGTMGHIAPEYLST---GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 449 ~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
.... ........||+.|||||++.+ +.|+.++|||||||++|||+||+.||...... ..+... ... +.
T Consensus 183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~----~~~~~~---~~~-~~ 254 (307)
T 3omv_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR----DQIIFM---VGR-GY 254 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----HHHHHH---HHT-TC
T ss_pred ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH----HHHHHH---Hhc-CC
Confidence 5332 223445679999999999863 46899999999999999999999999643211 111111 111 10
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..+.+ ...+...+..+.+++.+||+.||++||||.||++.|+.+
T Consensus 255 ----~~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 255 ----ASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp ----CCCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred ----CCCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 11111 112234456889999999999999999999999998764
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.9e-53 Score=439.99 Aligned_cols=271 Identities=25% Similarity=0.373 Sum_probs=221.7
Q ss_pred ccCHHHHHHHhcCCcccCccccCCCceEEEEEeCC------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccC-CCccc
Q 007073 283 RYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVH-RNLLR 355 (619)
Q Consensus 283 ~~~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H-~niv~ 355 (619)
.+...++++..++|++.+.||+|+||+||+|.+.. ++.||||+++........+.|.+|++++++++| ||||+
T Consensus 53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 35567788888999999999999999999998642 468999999876666667889999999999975 89999
Q ss_pred eeeeeeCC-CcceeEecccccchhhhhhcccCC------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 007073 356 LIGFCTTP-TERLLVYPFMQNLSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHR 422 (619)
Q Consensus 356 l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 422 (619)
++|+|.++ +..++|||||++|+|.++|+.... ....+++..+..++.|||+||+|||++ +||||
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHR 209 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecC
Confidence 99999765 568999999999999999975321 134589999999999999999999999 99999
Q ss_pred CCCCCcEEeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCC
Q 007073 423 DVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 500 (619)
Q Consensus 423 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~ 500 (619)
||||+|||+++++.+||+|||+|+.+...... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999976544333 3345679999999999999999999999999999999998 899997
Q ss_pred CCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 501 FSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..... ..+.. .+....++ ..+...+.++.+++.+||+.||++||||.||++.|+.+
T Consensus 290 ~~~~~----~~~~~---~i~~g~~~----------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 290 GVKID----EEFCR---RLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp TCCCS----HHHHH---HHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCHH----HHHHH---HHHcCCCC----------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 53321 11111 11111111 12223346789999999999999999999999998764
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.6e-52 Score=427.13 Aligned_cols=251 Identities=20% Similarity=0.326 Sum_probs=203.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|++.+.||+|+||+||+|++. +|+.||||++.... .....+.|.+|++++++++|||||++++++.+++..++|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999974 69999999996543 33456789999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|+|.+++.... ...+++.....++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999997532 33478889999999999999999999 9999999999999999999999999999876432
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
. ...+..+||+.|||||++.+..|+.++|||||||++|||+||+.||...... +......... ..
T Consensus 179 ~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~~~~-~~----- 243 (350)
T 4b9d_A 179 V-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK--------NLVLKIISGS-FP----- 243 (350)
T ss_dssp H-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHTC-CC-----
T ss_pred c-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcCC-CC-----
Confidence 1 2234567999999999999999999999999999999999999999743211 1111211111 10
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+...+.++.+|+.+||+.||++|||++|+++
T Consensus 244 ----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 244 ----PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112233467899999999999999999999985
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-51 Score=419.09 Aligned_cols=265 Identities=23% Similarity=0.342 Sum_probs=199.7
Q ss_pred cCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHH--HHHHHHHHccCCCccceeeeeeCCC----cce
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQ--REVEMISVAVHRNLLRLIGFCTTPT----ERL 367 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~--~E~~~l~~l~H~niv~l~~~~~~~~----~~~ 367 (619)
++|.+.+.||+|+||+||+|++ +|+.||||++... ..+.+. .|+..+.+++|||||+++|++..++ ..+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 4577889999999999999998 5899999998632 233444 4555567889999999999997654 468
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC-----NPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
+|||||++|+|.++++.. .+++..+.+++.|+|+||+|||+++ .++|+||||||+|||++.++++||+||
T Consensus 78 lV~Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEecCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 999999999999999753 3899999999999999999999862 558999999999999999999999999
Q ss_pred ccceeeccCCcce---eeeccccccccccccccCC------CCCcchhhHHHHHHHHHHHhCCCCCCCCccccc------
Q 007073 443 GLAKLVDVRKTNV---TTQVRGTMGHIAPEYLSTG------KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE------ 507 (619)
Q Consensus 443 Gla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~------ 507 (619)
|+|+......... .....||+.|||||++.+. .++.++|||||||++|||+||+.|+........
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 9999875443322 2345799999999999754 467899999999999999999888753221110
Q ss_pred -cchhHHHHHHHHhhhcccchhccccccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 508 -DDVLLLDHVKKLEREKRLDAIVDRNLNKN-YNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 508 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..... ........... .++.+... ...+.+..+.+|+.+||+.||++||||.||++.|+.+
T Consensus 233 ~~~~~~-~~~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 233 PSDPSV-EEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp CSSCCH-HHHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccchH-HHHHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 00011 11111111111 11111111 1235567899999999999999999999999999874
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.5e-51 Score=416.29 Aligned_cols=249 Identities=20% Similarity=0.268 Sum_probs=206.6
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+.|+..+.||+|+||+||+|.+. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..++||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 56889999999999999999975 79999999996432 23456688999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++|+|.+++... .+++.....++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+....
T Consensus 153 ~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 153 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 9999999998752 389999999999999999999999 99999999999999999999999999999775433
Q ss_pred cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ... ...+.... .+.
T Consensus 225 ~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~---~~~i~~~~------~~~ 289 (346)
T 4fih_A 225 P-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKA---MKMIRDNL------PPR 289 (346)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHH---HHHHHHSS------CCC
T ss_pred C-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHH---HHHHHcCC------CCC
Confidence 2 34456899999999999999999999999999999999999999964321 111 11111110 000
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+ ......+.++.+++.+||+.||++|||+.|+++
T Consensus 290 ~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 290 L--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp C--SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C--CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 111233467899999999999999999999875
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-51 Score=412.00 Aligned_cols=247 Identities=23% Similarity=0.389 Sum_probs=196.1
Q ss_pred cccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeC----CCcceeEe
Q 007073 297 SEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT----PTERLLVY 370 (619)
Q Consensus 297 ~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ 370 (619)
...+.||+|+||+||+|.+. ++..||+|++.... .....+.|.+|++++++++|||||++++++.+ +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999975 68999999996433 34456789999999999999999999999865 24478999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-CCcEEEcccccceeec
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-DFEAVVGDFGLAKLVD 449 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~ 449 (619)
|||++|+|.+++.... .+++..+..++.||+.||+|||++ +++|+||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999998643 489999999999999999999998 113999999999999984 7899999999998543
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||...... ............ ....
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-------~~~~~~i~~~~~-~~~~ 251 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSGVK-PASF 251 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTTCC-CGGG
T ss_pred C---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-------HHHHHHHHcCCC-CCCC
Confidence 2 23445689999999998865 6999999999999999999999999642211 111111111111 0001
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+...++++.+++.+||+.||++|||++|+++
T Consensus 252 --------~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 252 --------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1112246889999999999999999999875
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.7e-51 Score=418.73 Aligned_cols=250 Identities=22% Similarity=0.227 Sum_probs=203.2
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
+.|...+.||+|+||+||+|++. +|+.||||+++.... +.+|+.++++++|||||++++++.+++..++||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 56788889999999999999975 699999999974321 24799999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEcccccceeeccC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-EAVVGDFGLAKLVDVR 451 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~~~ 451 (619)
+++|+|.++++... .+++.....++.||+.||+|||++ +||||||||+|||++.++ ++||+|||+|+.+...
T Consensus 132 ~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 99999999998643 389999999999999999999999 999999999999999987 6999999999987543
Q ss_pred Ccc----eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 452 KTN----VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 452 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
... .....+||+.|||||++.+..|+.++|||||||++|||+||+.||....... .. ..+.. .....
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~-~~i~~--~~~~~-- 275 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP----LC-LKIAS--EPPPI-- 275 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC----CH-HHHHH--SCCGG--
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----HH-HHHHc--CCCCc--
Confidence 221 1234579999999999999999999999999999999999999997533211 11 11111 00000
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
...++..+..+.+++.+||+.||++|||+.|+++.|..
T Consensus 276 -------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 276 -------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp -------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 01223344678999999999999999999999988765
No 11
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.6e-51 Score=420.36 Aligned_cols=319 Identities=71% Similarity=1.128 Sum_probs=269.6
Q ss_pred cccchhhhhcCcccccCHHHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc
Q 007073 269 AGEVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA 348 (619)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l 348 (619)
+.+.......++...+++.+++...++|+..+.||+|+||+||+|...+|+.||||++...........+.+|+++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l 84 (326)
T 3uim_A 5 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA 84 (326)
T ss_dssp ----------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC
T ss_pred CcccCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc
Confidence 34445555667788899999999999999999999999999999998889999999997654444445789999999999
Q ss_pred cCCCccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007073 349 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 428 (619)
Q Consensus 349 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 428 (619)
+||||+++++++..+...++||||+++|+|.+++.........+++..+..++.|++.||+|||+++.++|+||||||+|
T Consensus 85 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~N 164 (326)
T 3uim_A 85 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN 164 (326)
T ss_dssp CCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGG
T ss_pred cCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhh
Confidence 99999999999999999999999999999999998876666779999999999999999999999888899999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccccc
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEED 508 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~ 508 (619)
|+++.++.+||+|||+++..............||+.|+|||.+.+..++.++||||||+++|||+||+.||+........
T Consensus 165 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 244 (326)
T 3uim_A 165 ILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244 (326)
T ss_dssp EEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS
T ss_pred EEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccccc
Confidence 99999999999999999987665555566667999999999999889999999999999999999999999765544555
Q ss_pred chhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcccchhhhhhhhh
Q 007073 509 DVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVEV 587 (619)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~ 587 (619)
.....++............+.+..+........+..+.+++.+||+.||++|||+.+|++.|++....+.++++...+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~ 323 (326)
T 3uim_A 245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEM 323 (326)
T ss_dssp CSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSCC-------
T ss_pred chhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhhhhhhHHHh
Confidence 5667777777777777777888877788889999999999999999999999999999999999999998888765544
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.9e-51 Score=414.89 Aligned_cols=248 Identities=21% Similarity=0.283 Sum_probs=208.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.. .....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999974 79999999996421 2334678999999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++.... .+++.....++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999998643 389999999999999999999999 999999999999999999999999999998754
Q ss_pred CCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... . +........ ..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~---~~~~~i~~~-~~---- 251 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----G---LIFAKIIKL-EY---- 251 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----H---HHHHHHHHT-CC----
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----H---HHHHHHHcC-CC----
Confidence 332 334567899999999999999999999999999999999999999964321 1 111111111 10
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV 567 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 567 (619)
.++...+.++.+++.+|++.||++|||++|++
T Consensus 252 ------~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 ------DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ------CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ------CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11222345789999999999999999999874
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-49 Score=417.37 Aligned_cols=250 Identities=20% Similarity=0.266 Sum_probs=207.3
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.+.|+..+.||+|+||+||+|.+. +|+.||||++.... ....+.+.+|+.++++++|||||++++++.+++..++|||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 356999999999999999999975 69999999996433 3345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
||++|+|.+++... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 229 y~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 229 FLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp CCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 99999999998652 388999999999999999999999 9999999999999999999999999999977543
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.. .....+||+.|||||++.+..|+.++|||||||++|||+||+.||..... ... ...+.... .+
T Consensus 301 ~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~---~~~i~~~~------~~ 365 (423)
T 4fie_A 301 VP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKA---MKMIRDNL------PP 365 (423)
T ss_dssp CC-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHH---HHHHHHSC------CC
T ss_pred Cc-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHH---HHHHHcCC------CC
Confidence 32 34456799999999999999999999999999999999999999964321 111 11111110 00
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+ ......+.++.+|+.+||+.||++|||+.|+++
T Consensus 366 ~~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 366 RL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CC--SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CC--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 011223467899999999999999999999875
No 14
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-49 Score=395.71 Aligned_cols=246 Identities=22% Similarity=0.329 Sum_probs=190.8
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||+||+|... +|+.||||++.+.. .....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999964 79999999996432 2334577999999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+ +|+|.+++... ..++......++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 67999988763 3489999999999999999999999 999999999999999999999999999987643
Q ss_pred CCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.. ......||+.|||||++.+..+ +.++||||+||++|||+||+.||...... ......... ..
T Consensus 165 ~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--------~~~~~i~~~-~~---- 229 (275)
T 3hyh_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFKNISNG-VY---- 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHT-CC----
T ss_pred CC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcC-CC----
Confidence 22 2345679999999999988876 58999999999999999999999643211 111111111 10
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.++...+.++.+++.+|++.||++|||++|+++
T Consensus 230 ------~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 ------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111223457889999999999999999999986
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.7e-49 Score=399.67 Aligned_cols=251 Identities=21% Similarity=0.309 Sum_probs=189.5
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc-------
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE------- 365 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------- 365 (619)
++|++.+.||+|+||+||+|++. +|+.||||+++........+.+.+|++++++++|||||++++++...+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45889999999999999999975 7999999999765555556789999999999999999999999865432
Q ss_pred -----ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEc
Q 007073 366 -----RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVG 440 (619)
Q Consensus 366 -----~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 440 (619)
.++||||+++|+|.+++..... ....++.....++.|++.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 5899999999999999976432 22356677889999999999999999 99999999999999999999999
Q ss_pred ccccceeeccCCcc-----------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc
Q 007073 441 DFGLAKLVDVRKTN-----------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD 509 (619)
Q Consensus 441 DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~ 509 (619)
|||+|+........ ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------ 231 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ 231 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------
Confidence 99999877543221 1234579999999999999999999999999999999996 664211
Q ss_pred hhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 510 VLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........... .... .......+...+++.+||+.||++|||+.|+++
T Consensus 232 -~~~~~~~~~~~-~~~p---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 -ERVRTLTDVRN-LKFP---------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHHHHHT-TCCC---------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHHhc-CCCC---------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00111111110 0000 011233356778999999999999999999876
No 16
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.3e-50 Score=406.98 Aligned_cols=243 Identities=22% Similarity=0.273 Sum_probs=193.6
Q ss_pred cCCcccCccccCCCceEEEEEeC----CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
++|++.+.||+|+||+||+|+.. +++.||||++++.. .......+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999862 47899999986432 12233468899999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.+++.... .+++.....++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999998643 389999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
..... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||...... +....... ...
T Consensus 177 ~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~~-~~~--- 243 (304)
T 3ubd_A 177 IDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--------ETMTMILK-AKL--- 243 (304)
T ss_dssp ----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CCC---
T ss_pred cCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--------HHHHHHHc-CCC---
Confidence 43222 234567999999999999999999999999999999999999999743221 11111111 110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
.++...+.++.+++.+||+.||++|||+
T Consensus 244 -------~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 -------GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -------CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1122234678999999999999999985
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-45 Score=388.71 Aligned_cols=262 Identities=18% Similarity=0.263 Sum_probs=200.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCC------Cc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------TE 365 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~ 365 (619)
++|++.+.||+|+||+||+|.+. +|+.||||+++.... ....+.+.+|+++++.++|||||++++++... +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999975 799999999975432 33456788999999999999999999987543 56
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++|||||+ |+|.+++... ..+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~----~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS----QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 799999996 6788888753 3489999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCC---cceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 446 KLVDVRK---TNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 446 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
+.+.... .......+||+.|||||++.+. .++.++||||+||++|||+||+.||...... .....+.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-----~~l~~I~~~~g 280 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-----HQLQLIMMVLG 280 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-----HHHHHHHHHHC
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-----HHHHHHHHhcC
Confidence 8764322 2233456899999999998775 4699999999999999999999999753321 11111111110
Q ss_pred hcccc-----------hhccccc-cCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 EKRLD-----------AIVDRNL-NKNYN-----IQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 ~~~~~-----------~~~~~~l-~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..... ....... ....+ +..+.++.+|+.+||+.||++|||+.|+++
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000 0000000 00000 112357889999999999999999999875
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.2e-45 Score=380.33 Aligned_cols=283 Identities=39% Similarity=0.640 Sum_probs=240.0
Q ss_pred CHHHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC
Q 007073 285 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 364 (619)
Q Consensus 285 ~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 364 (619)
++.++...+++|+..+.||+|+||+||+|.+++|+.||||++... .....+.+.+|+++++.++||||+++++++...+
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE-SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC-CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 334455577899999999999999999999888999999988653 3455778999999999999999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||||+++|+|.+++.........+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999987554455689999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCC-cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 445 AKLVDVRK-TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 445 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
++...... ........||+.|+|||.+.+..++.++||||||+++|||+||+.||....... ......+........
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE--MVNLAEWAVESHNNG 263 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS--CCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH--HHHHHHHhhhccccc
Confidence 98754322 222334568999999999999999999999999999999999999997543322 223344544445555
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 524 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.+...+++.+........+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 66667777777777889999999999999999999999999999999874
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.1e-46 Score=387.53 Aligned_cols=198 Identities=24% Similarity=0.377 Sum_probs=170.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeC----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 366 (619)
..+.|++.+.||+|+||+||+|+.+ +++.||||++... .....+.+|+++++.+ +|||||++++++.+.+..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~---~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT---SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc---cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 4578999999999999999999853 4678999998653 2345688999999988 699999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEcccccc
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLA 445 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla 445 (619)
++||||+++|+|.+++.. +++.....++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|
T Consensus 96 ~lvmE~~~g~~L~~~~~~-------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNS-------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEECCCCCCHHHHHTT-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeCCCcccHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 999999999999998853 78899999999999999999999 99999999999999876 79999999999
Q ss_pred eeeccCCc---------------------------ceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCC
Q 007073 446 KLVDVRKT---------------------------NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQR 497 (619)
Q Consensus 446 ~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~ 497 (619)
+....... ...+..+||+.|||||++.+. .++.++||||+||++|||+||+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 86543221 112345799999999999775 48999999999999999999999
Q ss_pred CCCCC
Q 007073 498 AIDFS 502 (619)
Q Consensus 498 p~~~~ 502 (619)
||...
T Consensus 246 Pf~~~ 250 (361)
T 4f9c_A 246 PFYKA 250 (361)
T ss_dssp SSSCC
T ss_pred CCCCC
Confidence 99643
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.1e-44 Score=396.59 Aligned_cols=249 Identities=24% Similarity=0.296 Sum_probs=198.3
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHH---HHHHHHccCCCccceeeeeeCCCcc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQRE---VEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E---~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
.++|++.++||+|+||+||+|+.. +|+.||||++.+.. .......+.+| +.+++.++|||||++++++.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467999999999999999999975 69999999986321 11223334444 5556677899999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||++||+|.+++.... .++......++.||+.||+|||++ +||||||||+|||++.++++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999998643 389999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
.+.... ....+||+.|||||++.+ ..|+.++||||+||++|||+||+.||....... .......... ..
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-----~~~i~~~i~~-~~- 410 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTLT-MA- 410 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-----HHHHHHHHHH-CC-
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhhcC-CC-
Confidence 765432 334679999999999975 579999999999999999999999996432211 1111111110 00
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA-----MSEVV 567 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl 567 (619)
..++...+.++.+|+.+|++.||++|++ ++||.
T Consensus 411 ---------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 411 ---------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred ---------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 0112233467899999999999999998 56665
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.5e-44 Score=396.38 Aligned_cols=252 Identities=20% Similarity=0.273 Sum_probs=207.0
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|+++|+.++|||||++++++.++...++|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 368999999999999999999975 79999999986432 3345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC--CcEEEcccccceeec
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED--FEAVVGDFGLAKLVD 449 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfGla~~~~ 449 (619)
||++|+|.+++... ...+++.....++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 235 ~~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 235 FMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp CCCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred ecCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 99999999988652 23489999999999999999999999 99999999999999854 899999999999875
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +....+.... . -+
T Consensus 309 ~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--------~~~~~i~~~~-~--~~ 375 (573)
T 3uto_A 309 PKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--------ETLRNVKSCD-W--NM 375 (573)
T ss_dssp TTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTC-C--CC
T ss_pred CCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHhCC-C--CC
Confidence 433 334567999999999999999999999999999999999999999743221 1111111110 0 00
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... .....+.++.+|+.+||+.||++|||+.|+++
T Consensus 376 ~~~----~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 376 DDS----AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp CSG----GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Ccc----cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 11122357889999999999999999999986
No 22
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-43 Score=372.63 Aligned_cols=261 Identities=27% Similarity=0.404 Sum_probs=213.3
Q ss_pred HhcCCcccCccccCCCceEEEEEeC--------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT 362 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 362 (619)
..++|.+.+.||+|+||.||+|.+. ++..||||+++........+.+.+|+++++++ +||||+++++++..
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 4578899999999999999999852 35679999997655455567899999999999 89999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCC------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 430 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 430 (619)
.+..++||||+++|+|.+++..... ....+++..+..++.|+++||+|||++ +|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 9999999999999999999986432 123588999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccccc
Q 007073 431 LDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEED 508 (619)
Q Consensus 431 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~ 508 (619)
++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--- 312 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--- 312 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---
Confidence 999999999999999876543221 2233457889999999999999999999999999999999 99998653221
Q ss_pred chhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 509 DVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.+. ....... ....+...+..+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 313 --~~~---~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 313 --ELF---KLLKEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp --GHH---HHHHTTC----------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHH---HHHhcCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111 1111111 1112223346789999999999999999999999999874
No 23
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.5e-42 Score=351.86 Aligned_cols=283 Identities=36% Similarity=0.653 Sum_probs=230.6
Q ss_pred cccccCHHHHHHHhcCCccc------CccccCCCceEEEEEeCCCcEEEEEEeccCC---CcchHHHHHHHHHHHHHccC
Q 007073 280 QLKRYSWRELQLATDNFSEK------NVLGQGGFGKVYRGVLADGTKVAVKRLTDFE---SPGGDAAFQREVEMISVAVH 350 (619)
Q Consensus 280 ~~~~~~~~el~~~~~~~~~~------~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l~H 350 (619)
....+++.++..++++|... +.||+|+||.||+|.. +++.||||++.... .....+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678899999999999877 8999999999999997 58999999986432 23456789999999999999
Q ss_pred CCccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007073 351 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 430 (619)
Q Consensus 351 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 430 (619)
|||+++++++...+..++||||+++++|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999999875432 34589999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc
Q 007073 431 LDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD 509 (619)
Q Consensus 431 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~ 509 (619)
++.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|||+||+.||........
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-- 242 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-- 242 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--
Confidence 999999999999999876543222 2334568999999998864 589999999999999999999999975433211
Q ss_pred hhHHHHHHHHhh-hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 510 VLLLDHVKKLER-EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 510 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...... ...+...+++.+ .......+..+.+++.+||+.||++|||+.++++.|+++
T Consensus 243 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 243 --LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp --TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred --HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1122222221 122333444433 234677788999999999999999999999999999874
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.8e-43 Score=357.30 Aligned_cols=258 Identities=26% Similarity=0.403 Sum_probs=210.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|...+.||+|+||+||+|.+. +|+.||+|++.. ......+.|.+|++++++++||||+++++++..++..++|||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR-FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 467888999999999999999975 689999999854 334566789999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|+|.+++... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 88 YIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CCTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 99999999999863 23489999999999999999999999 9999999999999999999999999999876433
Q ss_pred Ccce-------------eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc-hhHHHHHH
Q 007073 452 KTNV-------------TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD-VLLLDHVK 517 (619)
Q Consensus 452 ~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~-~~~~~~~~ 517 (619)
.... .....||+.|+|||.+.+..++.++||||||+++|||++|..|+.......... ........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 2221 114569999999999999999999999999999999999999986533222111 11111100
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
.. .+...+..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 242 -------------~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 242 -------------RY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp -------------HT----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------------cc----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00 11122346889999999999999999999999998753
No 25
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.6e-43 Score=363.32 Aligned_cols=258 Identities=24% Similarity=0.366 Sum_probs=210.0
Q ss_pred HhcCCcccCccccCCCceEEEEEeC----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
..++|.+.+.||+|+||+||+|.+. .+..||||+++........+.|.+|++++++++||||+++++++...+..+
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 3467888999999999999999974 345699999986555566778999999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 127 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 999999999999999653 23489999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcc--eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 448 VDVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 448 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
....... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.........
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~~- 271 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--------DVISSVEEGY- 271 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHHHHHHTTC-
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHcCC-
Confidence 7543222 2223346788999999998999999999999999999999 99998643211 1111111111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....+...+..+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 272 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l 311 (325)
T 3kul_A 272 ---------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311 (325)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1112223446789999999999999999999999999874
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-43 Score=363.54 Aligned_cols=265 Identities=26% Similarity=0.395 Sum_probs=205.1
Q ss_pred HHHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC
Q 007073 286 WRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 364 (619)
Q Consensus 286 ~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 364 (619)
..++....++|++.+.||+|+||+||+|.+ +|+.||||++.... .....+.+.+|++++++++||||+++++++....
T Consensus 29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 3p86_A 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107 (309)
T ss_dssp ---CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 344555677899999999999999999988 58999999987543 2334567899999999999999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCcEEEccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK--IIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred ceEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 99999999999999999975321 22388999999999999999999999 8 999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
|+++...... .......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... +........
T Consensus 184 g~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--------~~~~~~~~~ 254 (309)
T 3p86_A 184 GLSRLKASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--------QVVAAVGFK 254 (309)
T ss_dssp C------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--------HHHHHHHHS
T ss_pred CCCccccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhc
Confidence 9998654322 2233456999999999999999999999999999999999999999643211 111111100
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.. ....+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 255 ~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~ 296 (309)
T 3p86_A 255 CK---------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296 (309)
T ss_dssp CC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC---------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 00 0112223345789999999999999999999999999874
No 27
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.7e-43 Score=362.08 Aligned_cols=251 Identities=21% Similarity=0.271 Sum_probs=198.5
Q ss_pred HhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..++|++.+.||+|+||+||+|.+ .+|+.||||++.........+.+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457899999999999999999996 4799999999976544444567889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999997643 389999999999999999999999 999999999999999999999999999986654
Q ss_pred CCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
..........||+.|+|||.+.+..+ +.++||||+||++|||+||+.||+..... ......... ..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~-~~---- 227 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM--------ALYKKIMRG-KY---- 227 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHT-CC----
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcC-CC----
Confidence 44334455679999999999988775 89999999999999999999999743211 111111111 00
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+...+..+.+++.+||+.||++|||+.|+++
T Consensus 228 ------~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 228 ------DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 011122356789999999999999999999985
No 28
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1e-43 Score=373.98 Aligned_cols=260 Identities=27% Similarity=0.372 Sum_probs=211.5
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
....++|.+.+.||+|+||.||+|.+. +++.||||+++........+.|.+|++++++++||||+++++++...+..++
T Consensus 110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 345578889999999999999999986 7899999999765444455678999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.++++... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 190 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp EEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 999999999999997532 3488999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCccee-eeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 449 DVRKTNVT-TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 449 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
........ ....+++.|+|||.+.++.++.++|||||||++|||+| |..||...... +..........
T Consensus 264 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~-- 333 (377)
T 3cbl_A 264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--------QTREFVEKGGR-- 333 (377)
T ss_dssp TTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--------HHHHHHHTTCC--
T ss_pred CCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC--
Confidence 43211111 11235778999999998999999999999999999999 99998643211 11111111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 334 --------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 334 --------LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 111222346789999999999999999999999999874
No 29
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.9e-43 Score=369.76 Aligned_cols=258 Identities=26% Similarity=0.403 Sum_probs=200.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeC----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
..++|.+.+.||+|+||.||+|.+. ++..||||+++........+.|.+|+.++++++||||+++++++......+
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 3467899999999999999999964 577899999976555556678999999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+++|+|.++++.. ...+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 999999999999999753 23489999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcce--eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 448 VDVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 448 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... +.........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--------~~~~~i~~~~- 267 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--------DVIKAVDEGY- 267 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--------HHHHHHHTTE-
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCC-
Confidence 65432221 122345778999999999999999999999999999998 99998643211 1111111111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....+...+..+.+++.+||+.||++||++.+|++.|+..
T Consensus 268 ---------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 268 ---------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp ---------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 1111223446789999999999999999999999999875
No 30
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2e-43 Score=369.28 Aligned_cols=271 Identities=26% Similarity=0.384 Sum_probs=217.8
Q ss_pred ccCHHHHHHHhcCCcccCccccCCCceEEEEEe------CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccc
Q 007073 283 RYSWRELQLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLR 355 (619)
Q Consensus 283 ~~~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~ 355 (619)
.+...+++...++|.+.+.||+|+||.||+|.+ .+++.||||+++........+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 345667778889999999999999999999984 246899999998655555667899999999999 7899999
Q ss_pred eeeeeeCCCc-ceeEecccccchhhhhhcccCCC----------------------------------------------
Q 007073 356 LIGFCTTPTE-RLLVYPFMQNLSVAYRLREIKPG---------------------------------------------- 388 (619)
Q Consensus 356 l~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------- 388 (619)
+++++...+. .++||||+++|+|.+++......
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999987654 88999999999999999764321
Q ss_pred ----------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 389 ----------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 389 ----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 12288999999999999999999999 99999999999999999999999999998664332
Q ss_pred c-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 453 T-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 453 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
. .......||+.|+|||++.+..++.++||||||+++|||+| |+.||....... .... .......
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~---~~~~~~~------ 314 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCR---RLKEGTR------ 314 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----HHHH---HHHHTCC------
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH----HHHH---HHHcCCC------
Confidence 2 23344568999999999999999999999999999999999 999996533211 1111 1111110
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 315 ----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 315 ----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 111222335789999999999999999999999999874
No 31
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=7.6e-43 Score=349.52 Aligned_cols=257 Identities=24% Similarity=0.370 Sum_probs=213.6
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
..++|++.+.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++......++|||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 457889999999999999999999888899999997533 345779999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp CCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred ccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 999999999997642 3488999999999999999999999 9999999999999999999999999999877554
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||+..... ...........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~------ 223 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--------EVVLKVSQGHR------ 223 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCC------
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--------HHHHHHHcCCC------
Confidence 4444444557788999999998899999999999999999999 99998643221 11111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
...+...+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 224 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 224 ----LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp ----CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred ----CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 0011122357899999999999999999999999998854
No 32
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.6e-43 Score=351.39 Aligned_cols=256 Identities=26% Similarity=0.398 Sum_probs=211.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
..++|+..+.||+|+||+||+|.+.+++.||+|++.... ...+.+.+|++++++++||||+++++++......++|||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 456788999999999999999999889999999997532 345779999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 99999999999753 23488999999999999999999999 9999999999999999999999999999866443
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.........+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||...... +..........
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--------~~~~~~~~~~~------ 225 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFR------ 225 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC------
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhcCcc------
Confidence 3333334457788999999999999999999999999999999 99998643211 11111111100
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 226 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 226 ----LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence 111122245789999999999999999999999999874
No 33
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-43 Score=365.65 Aligned_cols=266 Identities=24% Similarity=0.376 Sum_probs=212.1
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEe------CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeee
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCT 361 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 361 (619)
++...++|.+.+.||+|+||.||+|.+ .++..||||++.........+.+.+|+.+++++ +||||+++++++.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 445678899999999999999999996 245689999997554445567899999999999 8999999999999
Q ss_pred CCCcceeEecccccchhhhhhcccCCC-------------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 007073 362 TPTERLLVYPFMQNLSVAYRLREIKPG-------------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHR 422 (619)
Q Consensus 362 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 422 (619)
..+..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||++ +|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 999999999999999999999764321 13478999999999999999999999 99999
Q ss_pred CCCCCcEEeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCC
Q 007073 423 DVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 500 (619)
Q Consensus 423 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~ 500 (619)
||||+||+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |..||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999876543332 2334457889999999999999999999999999999998 999996
Q ss_pred CCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 501 FSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
...... ..... .. .. .....+...+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 277 ~~~~~~----~~~~~---~~-~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 333 (344)
T 1rjb_A 277 GIPVDA----NFYKL---IQ-NG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 333 (344)
T ss_dssp TCCCSH----HHHHH---HH-TT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred cCCcHH----HHHHH---Hh-cC---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 543211 11111 11 11 111112223467899999999999999999999999998753
No 34
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.7e-42 Score=352.64 Aligned_cols=250 Identities=20% Similarity=0.301 Sum_probs=206.5
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|+..+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 46799999999999999999996 478999999986433 3346778999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|+|.+++... .++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 98 YLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 99999999999753 378899999999999999999999 9999999999999999999999999999876543
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.. ......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ............ .
T Consensus 170 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~~~~~~~~-~---- 235 (297)
T 3fxz_A 170 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--------RALYLIATNGTP-E---- 235 (297)
T ss_dssp TC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHHCSC-C----
T ss_pred cc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC-C----
Confidence 33 233457999999999999999999999999999999999999999643211 111111111110 0
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+...+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 236 ---LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp ---CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---CCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0112233457889999999999999999999985
No 35
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.1e-43 Score=367.93 Aligned_cols=262 Identities=29% Similarity=0.398 Sum_probs=214.8
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC--------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeee
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCT 361 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 361 (619)
...++|.+.+.||+|+||+||+|.+. ++..||||+++..........+.+|+++++++ +||||+++++++.
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 35578899999999999999999852 34679999998665555668899999999999 8999999999999
Q ss_pred CCCcceeEecccccchhhhhhcccCCC------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 007073 362 TPTERLLVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANV 429 (619)
Q Consensus 362 ~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 429 (619)
..+..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||++ +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 999999999999999999999865421 24589999999999999999999999 999999999999
Q ss_pred EeCCCCcEEEcccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccc
Q 007073 430 LLDEDFEAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEE 507 (619)
Q Consensus 430 ll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~ 507 (619)
|++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||......
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-- 300 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-- 300 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 999999999999999987643322 22334457889999999999999999999999999999999 99998643211
Q ss_pred cchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 508 DDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+.......... ...+...+..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 301 ------~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 301 ------ELFKLLKEGHR----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp ------HHHHHHHTTCC----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------HHHHHHHcCCC----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111111111 111222345789999999999999999999999999885
No 36
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-43 Score=366.62 Aligned_cols=260 Identities=27% Similarity=0.381 Sum_probs=211.5
Q ss_pred hcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
.++|.+.+.||+|+||+||+|.+. +++.||||+++..........+.+|+.++++++||||+++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467888999999999999999953 46789999997665566677899999999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCC---CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---cEEEc
Q 007073 367 LLVYPFMQNLSVAYRLREIKP---GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF---EAVVG 440 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~ 440 (619)
++||||+++|+|.+++..... ....+++..+..++.|+++||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999986542 224589999999999999999999999 999999999999999554 59999
Q ss_pred ccccceeeccCC-cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHH
Q 007073 441 DFGLAKLVDVRK-TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 441 DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
|||+++...... ........||+.|+|||.+.+..++.++|||||||++|||+| |+.||...... +....
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--------~~~~~ 298 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EVLEF 298 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHH
Confidence 999998653222 222334568899999999999999999999999999999998 99998643211 11111
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...... ...+...+..+.+++.+||+.||++|||+.+|++.|+..
T Consensus 299 i~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 299 VTSGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp HHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHcCCC----------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 111111 111222345789999999999999999999999999873
No 37
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.5e-42 Score=377.91 Aligned_cols=260 Identities=27% Similarity=0.412 Sum_probs=214.9
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeCC-CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
+...++|.+.+.||+|+||.||+|.+.. +..||||+++... ...+.|.+|+.++++++||||+++++++......++
T Consensus 216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 3456778889999999999999999864 8899999997532 346789999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 294 v~E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 368 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM 368 (495)
T ss_dssp EEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred EEEccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceec
Confidence 999999999999997643 23488999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
............++..|+|||.+.+..++.++|||||||++|||+| |+.||...... .+.. .....
T Consensus 369 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----~~~~---~~~~~----- 435 (495)
T 1opk_A 369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYE---LLEKD----- 435 (495)
T ss_dssp TTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHH---HHHTT-----
T ss_pred cCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH---HHHcC-----
Confidence 5433333334456789999999999999999999999999999999 99998653321 1111 11111
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
.....+...+..+.+++.+||+.||++|||+.+|++.|+...
T Consensus 436 -----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 436 -----YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 111122334467899999999999999999999999999864
No 38
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.2e-43 Score=358.97 Aligned_cols=263 Identities=28% Similarity=0.395 Sum_probs=215.1
Q ss_pred HHHhcCCcccCccccCCCceEEEEEe------CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
+...++|.+.+.||+|+||.||+|.. .+++.||||+++........+.+.+|++++++++||||+++++++...
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 34567899999999999999999986 245889999997655555667899999999999999999999999999
Q ss_pred CcceeEecccccchhhhhhcccCC--------------------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKP--------------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRD 423 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~D 423 (619)
+..++||||+++|+|.+++..... ....+++..+..++.|+++||+|||++ +|+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccc
Confidence 999999999999999999986433 123488999999999999999999999 999999
Q ss_pred CCCCcEEeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCC
Q 007073 424 VKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDF 501 (619)
Q Consensus 424 lkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~ 501 (619)
|||+||+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999876543332 2233457889999999999899999999999999999999 9999865
Q ss_pred CccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 502 SRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.... ..... ..... ....+...+..+.+++.+||+.||++|||+.++++.|+++
T Consensus 256 ~~~~-----~~~~~---~~~~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 256 IPPE-----RLFNL---LKTGH----------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp CCGG-----GHHHH---HHTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCHH-----HHHHH---hhcCC----------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3321 11111 11110 1111223346789999999999999999999999999873
No 39
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-43 Score=363.52 Aligned_cols=266 Identities=24% Similarity=0.400 Sum_probs=215.8
Q ss_pred HHHHHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeee
Q 007073 288 ELQLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 361 (619)
Q Consensus 288 el~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 361 (619)
.+....++|.+.+.||+|+||.||+|.+. +++.||||+++........+.+.+|+.++++++||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34456788999999999999999999974 348899999986555556678999999999999999999999999
Q ss_pred CCCcceeEecccccchhhhhhcccCCC--------------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 007073 362 TPTERLLVYPFMQNLSVAYRLREIKPG--------------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 421 (619)
Q Consensus 362 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH 421 (619)
..+..++||||+++|+|.+++...... ...+++..+..++.|+++||.|||++ +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 999999999999999999999764321 24689999999999999999999999 9999
Q ss_pred cCCCCCcEEeCCCCcEEEcccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCC
Q 007073 422 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAI 499 (619)
Q Consensus 422 ~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~ 499 (619)
|||||+||+++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999986643322 22234568899999999999999999999999999999999 99998
Q ss_pred CCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 500 DFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
...... +........ ... ..+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 278 ~~~~~~--------~~~~~~~~~-~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~ 334 (343)
T 1luf_A 278 YGMAHE--------EVIYYVRDG-NIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334 (343)
T ss_dssp TTSCHH--------HHHHHHHTT-CCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCCChH--------HHHHHHhCC-CcC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence 643211 111111111 110 112233457899999999999999999999999999853
No 40
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-42 Score=352.18 Aligned_cols=262 Identities=22% Similarity=0.292 Sum_probs=206.8
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|++.+.||+|+||.||+|... +++.||+|.+.... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999964 68999999985432 233457889999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999997643 389999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
...........||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .......... ...
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~~-~~~-- 231 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV--------SIAIKHIQDS-VPN-- 231 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH--------HHHHHHHSSC-CCC--
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhhcc-CCC--
Confidence 44433444567999999999999999999999999999999999999999753221 0111111110 000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHhcCCc
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRP-AMSEVVRMLEGEGL 575 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~ 575 (619)
.........+..+.+++.+|++.||++|| +++++.+.|+....
T Consensus 232 ---~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 232 ---VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp ---HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred ---cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 00011222346789999999999999998 89999999987543
No 41
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=349.64 Aligned_cols=275 Identities=17% Similarity=0.208 Sum_probs=216.9
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC--cceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT--ERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv 369 (619)
.++|.+.+.||+|+||+||+|... +|+.||||++.........+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 467899999999999999999976 589999999976544455678899999999999999999999987765 67899
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEEEcccccc
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL----DEDFEAVVGDFGLA 445 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGla 445 (619)
|||+++++|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999986432 23389999999999999999999999 99999999999999 88889999999999
Q ss_pred eeeccCCcceeeecccccccccccccc--------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLS--------TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
+....... .....||+.|+|||.+. +..++.++|||||||++|||+||+.||..................
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 164 RELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred eecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 87654332 23456999999999886 577899999999999999999999999643332222222222111
Q ss_pred HHhhhcccchhc---c------c--cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 518 KLEREKRLDAIV---D------R--NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 518 ~~~~~~~~~~~~---~------~--~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
. ........+. . + .............+.+++.+||+.||++|||++|+++...+..
T Consensus 242 ~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 242 G-KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp H-CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred C-CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1 1111111000 0 0 1112345778889999999999999999999999999887643
No 42
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.6e-43 Score=377.48 Aligned_cols=260 Identities=24% Similarity=0.385 Sum_probs=212.7
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
++...++|.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++||||+++++++. .+..++
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 345667889999999999999999999888999999997532 35788999999999999999999999986 567899
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.++++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 260 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 999999999999997532 12378889999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
............++..|+|||.+....++.++|||||||++|||+| |+.||...... +.........++
T Consensus 335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~-- 404 (454)
T 1qcf_A 335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIRALERGYRM-- 404 (454)
T ss_dssp CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHHHHHTCCC--
T ss_pred CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCC--
Confidence 4322222233456789999999999999999999999999999999 99999643211 111122111111
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
..+...+..+.+++.+||+.||++|||+.+|++.|+...
T Consensus 405 --------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 405 --------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred --------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 112233467899999999999999999999999999863
No 43
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.7e-42 Score=351.41 Aligned_cols=262 Identities=24% Similarity=0.370 Sum_probs=203.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHH--ccCCCccceeeeeeCC----Cc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISV--AVHRNLLRLIGFCTTP----TE 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~----~~ 365 (619)
..++|++.+.||+|+||+||+|.+ +|+.||||++.. .....+..|.+++.. ++||||+++++++... ..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG----GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc----ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 356899999999999999999998 689999999853 345667778888776 7899999999986543 45
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEEeCCCCcE
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH--------EHCNPKIIHRDVKAANVLLDEDFEA 437 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~ 437 (619)
.++||||+++|+|.++++. ..+++..+.+++.|++.||+||| +. +|+||||||+|||++.++.+
T Consensus 81 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eEEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 7899999999999999954 24899999999999999999999 77 99999999999999999999
Q ss_pred EEcccccceeeccCCcce---eeeccccccccccccccCC------CCCcchhhHHHHHHHHHHHhC----------CCC
Q 007073 438 VVGDFGLAKLVDVRKTNV---TTQVRGTMGHIAPEYLSTG------KSSERTDVFGYGIMLLELVTG----------QRA 498 (619)
Q Consensus 438 kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~S~Gv~l~elltg----------~~p 498 (619)
||+|||+++......... .....||+.|+|||.+.+. .++.++|||||||++|||+|| +.|
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 999999998765443322 2234699999999999876 456799999999999999999 777
Q ss_pred CCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 499 IDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
|......... ................... .......+..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 233 f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 233 FYDVVPNDPS---FEDMRKVVCVDQQRPNIPN----RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTSCSSCC---HHHHHHHHTTSCCCCCCCG----GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCCCCcc---hhhhhHHHhccCCCCCCCh----hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 7543221111 1111111111111111000 112235667899999999999999999999999999863
No 44
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.6e-42 Score=353.41 Aligned_cols=249 Identities=22% Similarity=0.333 Sum_probs=206.3
Q ss_pred HhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
..++|.+.+.||+|+||.||+|.+ .+|+.||||++.... .....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 346799999999999999999997 579999999986533 334556788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|.+++.... .++......++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp ECCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 99999999999997643 388999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCcceeeeccccccccccccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSS-ERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
... ......||+.|+|||.+.+..++ .++||||+||++|||+||+.||+..... ......... ..
T Consensus 166 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~-~~--- 231 (328)
T 3fe3_A 166 VGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--------ELRERVLRG-KY--- 231 (328)
T ss_dssp SSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-CC---
T ss_pred CCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhC-CC---
Confidence 332 23455799999999999888775 8999999999999999999999753321 111111111 00
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+...+.++.+++.+||+.||++|||++|+++
T Consensus 232 -------~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 232 -------RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -------CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -------CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011123457889999999999999999999985
No 45
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.7e-42 Score=349.92 Aligned_cols=258 Identities=20% Similarity=0.339 Sum_probs=209.7
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
+...++|++.+.||+|+||+||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp BCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred cCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 34567899999999999999999999888899999997532 3457799999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 98 TEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp ECCCTTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred EeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 99999999999997632 2389999999999999999999999 99999999999999999999999999998664
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
...........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... ..........
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~----- 238 (283)
T 3gen_A 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQGL----- 238 (283)
T ss_dssp CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTC-----
T ss_pred ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhccc-----
Confidence 333223334457788999999999999999999999999999999 99998643211 1111111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....+...+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 239 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 239 -----RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp -----CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 0111122235788999999999999999999999999873
No 46
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.4e-42 Score=355.74 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=202.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|++.+.||+|+||+||+|... +++.||||++.........+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 367999999999999999999976 7899999998654444445678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 99999999998753 3489999999999999999999999 9999999999999999999999999999876433
Q ss_pred Cc-ceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 452 KT-NVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 452 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.. .......||+.|+|||.+.+..+ +.++|||||||++|||+||+.||....... .....+. ..... .
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~~----~~~~~---~ 228 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWK----EKKTY---L 228 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS---HHHHHHH----TTCTT---S
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHHh----ccccc---C
Confidence 22 22335579999999999988775 789999999999999999999997533211 1111111 00000 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.........+.+++.+||+.||++|||+.|+++.
T Consensus 229 ------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 ------NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0012233577899999999999999999999753
No 47
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2e-41 Score=348.59 Aligned_cols=261 Identities=20% Similarity=0.261 Sum_probs=211.9
Q ss_pred cccCHHHHHHHhcC----------CcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccC
Q 007073 282 KRYSWRELQLATDN----------FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVH 350 (619)
Q Consensus 282 ~~~~~~el~~~~~~----------~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H 350 (619)
..++++++..+++. |...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCC
Confidence 45677777776654 666779999999999999976 79999999986433 4456788999999999999
Q ss_pred CCccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007073 351 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 430 (619)
Q Consensus 351 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 430 (619)
|||+++++++...+..++||||+++++|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999998864 2389999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch
Q 007073 431 LDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV 510 (619)
Q Consensus 431 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~ 510 (619)
++.++.+||+|||++........ ......||+.|+|||.+.+..++.++||||||+++|||+||+.||......
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~----- 247 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV----- 247 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----
T ss_pred ECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----
Confidence 99999999999999987654322 233457999999999999999999999999999999999999999643211
Q ss_pred hHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 511 LLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.......... .+.+. .....+..+.+++.+||+.||++|||+.++++
T Consensus 248 ---~~~~~~~~~~------~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 248 ---QAMKRLRDSP------PPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ---HHHHHHHHSS------CCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHhcCC------CCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111110 00000 01122357889999999999999999999986
No 48
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.2e-42 Score=348.79 Aligned_cols=258 Identities=21% Similarity=0.326 Sum_probs=199.1
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCC----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
...++|++.+.||+|+||.||+|.+.. +..||+|++.........+.+.+|+.++++++||||+++++++. .+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 455789999999999999999999742 45799999876555556678999999999999999999999984 5678
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp EEEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred EEEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 8999999999999999753 23488999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
..............+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... ... ........
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-----~~~---~~i~~~~~- 235 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVI---GRIENGER- 235 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHH---HHHHTTCC-
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----HHH---HHHHcCCC-
Confidence 765443333344457889999999998999999999999999999997 99998643321 111 11111111
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 236 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 236 ---------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111223346789999999999999999999999999873
No 49
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-42 Score=358.68 Aligned_cols=256 Identities=25% Similarity=0.405 Sum_probs=201.5
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCc----EEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.++|+..+.||+|+||+||+|.+. +|+ +||+|.+.........+.|.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 467888999999999999999964 444 468888875555566788999999999999999999999998754 78
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+|+||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 9999999999999997643 3488999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 448 VDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 448 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
....... ......||+.|+|||.+.+..++.++|||||||++|||+| |+.||+...... .... .....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~---~~~~~-- 236 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSI---LEKGE-- 236 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHH---HHTTC--
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-----HHHH---HHcCC--
Confidence 6543322 2234457889999999999999999999999999999999 999997533211 1111 11111
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus 237 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 237 --------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp --------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred --------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1111223346789999999999999999999999999874
No 50
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.1e-42 Score=356.20 Aligned_cols=271 Identities=27% Similarity=0.305 Sum_probs=207.6
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc----c
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE----R 366 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~ 366 (619)
...++|++.+.||+|+||+||+|.+. ++.||||++... ......+..|+.++++++||||+++++++..... .
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ--DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC--chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 34578999999999999999999985 799999998642 2334556678888999999999999999977543 5
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC-------CCCeEecCCCCCcEEeCCCCcEEE
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC-------NPKIIHRDVKAANVLLDEDFEAVV 439 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------~~~ivH~Dlkp~NIll~~~~~~kl 439 (619)
++||||+++|+|.++++.. .+++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 98 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 8999999999999999752 3899999999999999999999862 348999999999999999999999
Q ss_pred cccccceeeccCCcc-eeeeccccccccccccccCC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch---
Q 007073 440 GDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTG-----KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV--- 510 (619)
Q Consensus 440 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~--- 510 (619)
+|||+++........ ......||+.|+|||.+.+. .++.++|||||||++|||+||+.||...........
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 999999877543322 23335799999999999763 456789999999999999999999975432211100
Q ss_pred -----hHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 511 -----LLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 511 -----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....+..... .......+... ......+..+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 253 ~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 316 (322)
T 3soc_A 253 IGQHPSLEDMQEVVV-HKKKRPVLRDY---WQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316 (322)
T ss_dssp HCSSCCHHHHHHHHT-TSCCCCCCCGG---GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hccCCchhhhhhhhh-cccCCCCcccc---ccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0111111111 01110000000 01234556799999999999999999999999999874
No 51
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.1e-42 Score=354.37 Aligned_cols=264 Identities=25% Similarity=0.376 Sum_probs=214.8
Q ss_pred HHHhcCCcccCccccCCCceEEEEEe------CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeC
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT 362 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 362 (619)
+...++|.+.+.||+|+||.||+|.+ .+++.||||+++........+.+.+|+++++++ +||||+++++++..
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 34567899999999999999999985 356889999997655555567899999999999 89999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCCC--------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKPG--------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 428 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 428 (619)
++..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||++ +|+||||||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N 175 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 175 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccce
Confidence 99999999999999999999764321 23589999999999999999999999 99999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccc
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEE 506 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~ 506 (619)
|+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||.......
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 255 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh
Confidence 99999999999999999876544332 2234457889999999999999999999999999999999 999986533211
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
........ . .....+...+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 256 ----~~~~~~~~----~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 256 ----KFYKMIKE----G---------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp ----HHHHHHHH----T---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----HHHHHhcc----C---------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 11111111 0 00111222346789999999999999999999999999873
No 52
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7e-43 Score=361.37 Aligned_cols=266 Identities=25% Similarity=0.357 Sum_probs=213.9
Q ss_pred HHHHHhcCCcccCccccCCCceEEEEEeCC------CcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeee
Q 007073 288 ELQLATDNFSEKNVLGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFC 360 (619)
Q Consensus 288 el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~ 360 (619)
+++...++|.+.+.||+|+||.||+|.... +..||+|.+.........+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 345567889999999999999999999642 2479999997655555677899999999999 899999999999
Q ss_pred eCCCcceeEecccccchhhhhhcccCC----------CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007073 361 TTPTERLLVYPFMQNLSVAYRLREIKP----------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 430 (619)
Q Consensus 361 ~~~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 430 (619)
...+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 999999999999999999999875321 123478999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccccc
Q 007073 431 LDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEED 508 (619)
Q Consensus 431 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~ 508 (619)
++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+| |..||.......
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-- 274 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-- 274 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--
Confidence 999999999999999866443322 2234457889999999999999999999999999999999 899986432211
Q ss_pred chhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 509 DVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
........ .. ....+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 275 --~~~~~~~~----~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 275 --KFYKLVKD----GY---------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp --HHHHHHHH----TC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHhc----CC---------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 11111111 10 0011112245789999999999999999999999999873
No 53
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.9e-42 Score=371.55 Aligned_cols=259 Identities=26% Similarity=0.383 Sum_probs=206.3
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
+...++|.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++||||+++++++.. +..++|
T Consensus 180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred ccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 34557788899999999999999999888899999997533 345789999999999999999999999876 678999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 257 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp ECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred ehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 99999999999997532 23488999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
...........++..|+|||.+.+..++.++||||||+++|||+| |+.||...... +.........+
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~---- 399 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYR---- 399 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC----
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC----
Confidence 433333334457889999999999999999999999999999999 99998643211 11112211111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
...+...+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 400 ------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 400 ------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred ------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 1122334567899999999999999999999999999853
No 54
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.1e-42 Score=350.03 Aligned_cols=261 Identities=28% Similarity=0.421 Sum_probs=216.5
Q ss_pred HHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 288 ELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 288 el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
+++...++|++.+.||+|+||+||+|.+. ++..||+|.+... ....+.+.+|++++++++||||+++++++......
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC--STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 34456778999999999999999999976 4889999998642 34567899999999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred EEEEEcCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccce
Confidence 99999999999999997643 24489999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
..............+|+.|+|||.+.+..++.++||||||+++|+|+| |..||....... ... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~-----~~~---~~~~~--- 228 (288)
T 3kfa_A 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYE---LLEKD--- 228 (288)
T ss_dssp TSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----HHH---HHHTT---
T ss_pred eccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHH---HHhcc---
Confidence 766554444445567889999999999999999999999999999999 999986533211 111 11111
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.....+...+..+.+++.+|++.||++|||+.++++.|+..
T Consensus 229 -------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 229 -------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 11111223346789999999999999999999999999873
No 55
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.6e-41 Score=347.72 Aligned_cols=265 Identities=23% Similarity=0.305 Sum_probs=202.0
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..++|++.+.||+|+||+||+|...+|+.||+|++.... .......+.+|++++++++||||+++++++..+...++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 446799999999999999999999889999999996433 2334577889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++ +|.+.+... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 99 EFMEK-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp ECCSE-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred cCCCC-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99985 777777653 23488999999999999999999999 999999999999999999999999999987643
Q ss_pred CCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc--ccch
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK--RLDA 527 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 527 (619)
... ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... .+........... ....
T Consensus 172 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 172 PVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD----QLPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp CCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT----HHHHHHHHHCCCCTTTSGG
T ss_pred Ccc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHHCCCChHHhhh
Confidence 322 2334568999999999876 568999999999999999999999997533221 1111111111000 0000
Q ss_pred hc------cccc---cC----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 IV------DRNL---NK----NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ~~------~~~l---~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. +... .. ...+....++.+++.+|++.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 0000 00 001122357889999999999999999999985
No 56
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.5e-42 Score=354.34 Aligned_cols=263 Identities=27% Similarity=0.412 Sum_probs=213.4
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC--------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeee
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFC 360 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~ 360 (619)
....++|.+.+.||+|+||.||+|.+. ++..||||+++........+.+.+|+++++++ +||||+++++++
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 345678999999999999999999863 46789999997655555667899999999999 899999999999
Q ss_pred eCCCcceeEecccccchhhhhhcccCCC------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007073 361 TTPTERLLVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 428 (619)
Q Consensus 361 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 428 (619)
...+..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||++ +|+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence 9999999999999999999999864421 23488999999999999999999999 99999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccc
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEE 506 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~ 506 (619)
|+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~- 266 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE- 266 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-
Confidence 99999999999999999876543322 2233457889999999998889999999999999999999 99998643211
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+.......... ...+...+..+.+++.+||+.||++|||+.++++.|+++
T Consensus 267 -------~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 267 -------ELFKLLKEGHR----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp -------HHHHHHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------HHHHHHhcCCC----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11111111110 111222345789999999999999999999999999885
No 57
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.2e-41 Score=342.96 Aligned_cols=261 Identities=15% Similarity=0.176 Sum_probs=208.7
Q ss_pred HhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 369 (619)
..++|.+.+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+.+++.+ +|+|++++++++......++|
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 346799999999999999999996 578999999986433 234578899999999 799999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc-----EEEccccc
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-----AVVGDFGL 444 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfGl 444 (619)
|||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 85 ~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEec-CCCHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9999 999999997632 3489999999999999999999999 9999999999999987766 99999999
Q ss_pred ceeeccCCcc------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 445 AKLVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 445 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
++........ ......||+.|+|||.+.+..++.++||||||+++|||+||+.||........ .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~ 235 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYERIGE 235 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHHHHHHHh
Confidence 9877543321 23445699999999999999999999999999999999999999975432211 111111111
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.......... ....+..+.+++.+||+.||++||++.+|++.|+..
T Consensus 236 ~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 236 KKQSTPLREL---------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHHSCHHHH---------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hccCccHHHH---------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 1111111111 112235789999999999999999999999999873
No 58
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.5e-41 Score=347.46 Aligned_cols=259 Identities=17% Similarity=0.166 Sum_probs=207.1
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEe
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 370 (619)
.++|.+.+.||+|+||+||+|.. .+|+.||||.+..... .+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 46789999999999999999996 5789999999864332 34578999999999 8999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc-----EEEcccccc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-----AVVGDFGLA 445 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfGla 445 (619)
||+ +++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 85 ELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 999 99999999864 23589999999999999999999999 9999999999999998887 999999999
Q ss_pred eeeccCCcc------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH
Q 007073 446 KLVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL 519 (619)
Q Consensus 446 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 519 (619)
+........ ......||+.|+|||.+.+..++.++|||||||++|||+||+.||........ ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~--~~~~~~i~~~ 235 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL--KERYQKIGDT 235 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--HHHHHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--HHHHHHHHhh
Confidence 876443322 12356799999999999999999999999999999999999999975432111 1111111111
Q ss_pred hhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 520 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
......... ....+ .+.+++..||+.||.+||++.+|.+.|+..
T Consensus 236 ~~~~~~~~~---------~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 236 KRATPIEVL---------CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHHSCHHHH---------TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hccCCHHHH---------hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 111000000 00112 789999999999999999999999999864
No 59
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.2e-41 Score=366.66 Aligned_cols=252 Identities=28% Similarity=0.388 Sum_probs=207.0
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC-cceeE
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-ERLLV 369 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv 369 (619)
...++|.+.+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|++++++++||||+++++++.... ..++|
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 45577888999999999999999985 7899999997533 4578999999999999999999999987665 68999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 266 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999999998643 23478899999999999999999999 99999999999999999999999999998543
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
.. .....+++.|+|||.+.+..++.++|||||||++|||+| |+.||....... . ........+
T Consensus 341 ~~----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-----~---~~~i~~~~~---- 404 (450)
T 1k9a_A 341 ST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----V---VPRVEKGYK---- 404 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-----H---HHHHHTTCC----
T ss_pred cc----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----H---HHHHHcCCC----
Confidence 22 122357889999999999999999999999999999999 999997533211 1 111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 405 ------~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i 443 (450)
T 1k9a_A 405 ------MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443 (450)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 112233456889999999999999999999999999874
No 60
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.7e-42 Score=347.75 Aligned_cols=266 Identities=23% Similarity=0.357 Sum_probs=205.3
Q ss_pred HhcCCcccCccccCCCceEEEEEe-----CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC--C
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--T 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~ 364 (619)
..++|++.+.||+|+||+||+|.+ .+|+.||||++... .....+.+.+|++++++++||||+++++++... .
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 457789999999999999999984 36889999998643 344557899999999999999999999998553 5
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred ceEEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 5889999999999999997642 3488999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcc--eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccc-------ccchhHHHH
Q 007073 445 AKLVDVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEE-------EDDVLLLDH 515 (619)
Q Consensus 445 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~-------~~~~~~~~~ 515 (619)
++........ ......++..|+|||.+.+..++.++||||||+++|||+||..|+....... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 9876543221 2223457788999999999999999999999999999999999986432110 000000000
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
... .+........+...+..+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 241 ~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l 289 (295)
T 3ugc_A 241 LIE---------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289 (295)
T ss_dssp HHH---------HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HHH---------HHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 000 0111111112334456889999999999999999999999999874
No 61
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.9e-42 Score=353.26 Aligned_cols=252 Identities=20% Similarity=0.300 Sum_probs=200.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc------
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE------ 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 365 (619)
.++|++.+.||+|+||.||+|.+. +|+.||||++.........+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 357889999999999999999986 7999999999765555667889999999999999999999998855432
Q ss_pred ---------------------------------------------------ceeEecccccchhhhhhcccCCCCCCcCH
Q 007073 366 ---------------------------------------------------RLLVYPFMQNLSVAYRLREIKPGEPVLDW 394 (619)
Q Consensus 366 ---------------------------------------------------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~ 394 (619)
.++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 6899999999999999986433 233566
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc-----------ceeeeccccc
Q 007073 395 VTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT-----------NVTTQVRGTM 463 (619)
Q Consensus 395 ~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~gt~ 463 (619)
..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 77899999999999999999 999999999999999999999999999987754321 1123356999
Q ss_pred cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHH
Q 007073 464 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVE 543 (619)
Q Consensus 464 ~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 543 (619)
.|+|||.+.+..++.++|||||||++|||+||..|+.. .......... ... .........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~~~~~~-~~~---------~~~~~~~~~ 300 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRIITDVRN-LKF---------PLLFTQKYP 300 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHHHHHHT-TCC---------CHHHHHHCH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHHHHhhc-cCC---------CcccccCCh
Confidence 99999999999999999999999999999998766320 0001111100 000 001123446
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 544 TMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 544 ~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+.+++.+||+.||++|||+.|+++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhh
Confidence 7789999999999999999999986
No 62
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.4e-41 Score=342.16 Aligned_cols=254 Identities=28% Similarity=0.488 Sum_probs=203.1
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchH------HHHHHHHHHHHHccCCCccceeeeeeCCC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGD------AAFQREVEMISVAVHRNLLRLIGFCTTPT 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~------~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 364 (619)
..++|++.+.||+|+||+||+|.+. +++.||||++......... +.+.+|++++++++||||+++++++....
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3467899999999999999999974 7899999998643322211 67899999999999999999999986554
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCc-----E
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK--IIHRDVKAANVLLDEDFE-----A 437 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~ 437 (619)
++||||+++|+|.+.+... ...+++..+..++.|++.||+|||++ + |+||||||+||+++.++. +
T Consensus 97 --~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~ 168 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCA 168 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred --eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeE
Confidence 7999999999998888653 33589999999999999999999999 8 999999999999988776 9
Q ss_pred EEcccccceeeccCCcceeeeccccccccccccc--cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007073 438 VVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL--STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 515 (619)
Q Consensus 438 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 515 (619)
||+|||+++.... ......||+.|+|||.+ ....++.++||||||+++|||+||+.||....... . ..
T Consensus 169 kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~---~~ 238 (287)
T 4f0f_A 169 KVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---I---KF 238 (287)
T ss_dssp EECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH---H---HH
T ss_pred EeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH---H---HH
Confidence 9999999974332 23445799999999998 34567899999999999999999999997433211 1 11
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
....... ......+...+..+.+++.+||+.||++|||+.++++.|++
T Consensus 239 ~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 239 INMIREE---------GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHHHHHS---------CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHhcc---------CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1111111 11112223344678999999999999999999999999976
No 63
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.3e-41 Score=344.77 Aligned_cols=261 Identities=27% Similarity=0.432 Sum_probs=202.4
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
...++|.+.+.||+|+||+||+|.+. ..+|+|.++... .....+.|.+|++++++++||||+++++++. .+..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 45578999999999999999999874 469999887533 3344578999999999999999999999875 4568899
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 110 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EecCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 9999999999998753 33489999999999999999999999 99999999999999999999999999998654
Q ss_pred cC-Ccceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 450 VR-KTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 450 ~~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
.. .........||+.|+|||.+. +..++.++|||||||++|||+||+.||...... ......... ...
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~----~~~~~~~~~---~~~- 255 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR----DQIIFMVGR---GYA- 255 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----HHHHHHHHH---TCC-
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH----HHHHHHHhc---CCC-
Confidence 32 222333457999999999986 667899999999999999999999999643221 111111111 100
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.+.+ .......+..+.+++.+||+.+|++||++.++++.|+..
T Consensus 256 ----~~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l 298 (307)
T 3lb7_A 256 ----SPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp ----CCCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHH
T ss_pred ----Ccch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHH
Confidence 0000 011122346789999999999999999999999999874
No 64
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9.2e-42 Score=342.15 Aligned_cols=254 Identities=26% Similarity=0.383 Sum_probs=195.7
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCC---cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFES---PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|+..+.||+|+||.||+|.+. |+.||||+++.... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467889999999999999999985 89999999864322 23357789999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC--------CCcEEEcc
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE--------DFEAVVGD 441 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--------~~~~kl~D 441 (619)
|||+++++|.+++.. ..+++..+..++.|+++||+|||++...+|+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999998853 24889999999999999999999992122999999999999986 67899999
Q ss_pred cccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
||+++...... .....||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ........
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~ 228 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL--------AVAYGVAM 228 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH--------HHHHHHHT
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHhhhc
Confidence 99998654322 22346899999999999999999999999999999999999999643211 01111111
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
.......+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 229 ---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 229 ---------NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp ---------SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred ---------CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 111111223334678999999999999999999999999976
No 65
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.4e-41 Score=351.45 Aligned_cols=249 Identities=22% Similarity=0.259 Sum_probs=205.0
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|++.+.||+|+||+||+|... +|+.||+|++++.. .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467899999999999999999975 68999999986421 233456788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|..++.... .++...+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999987633 388999999999999999999999 99999999999999999999999999998543
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.. ........||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ......... ..
T Consensus 157 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~-~~---- 222 (337)
T 1o6l_A 157 SD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILME-EI---- 222 (337)
T ss_dssp CT-TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-CC----
T ss_pred cC-CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--------HHHHHHHcC-CC----
Confidence 22 22234567999999999999999999999999999999999999999643211 111111111 00
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
.++...+.++.+++.+||+.||++|| ++.|+++
T Consensus 223 ------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 ------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11222346789999999999999999 8888874
No 66
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.9e-42 Score=350.50 Aligned_cols=271 Identities=26% Similarity=0.391 Sum_probs=217.7
Q ss_pred ccCHHHHHHHhcCCcccCccccCCCceEEEEEe------CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccc
Q 007073 283 RYSWRELQLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLR 355 (619)
Q Consensus 283 ~~~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~ 355 (619)
.+...+++...++|.+.+.||+|+||+||+|.+ .+++.||||+++........+.+.+|+++++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 345566677788999999999999999999984 356899999998655555667899999999999 6999999
Q ss_pred eeeeeeCCC-cceeEecccccchhhhhhcccCCC------------CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 007073 356 LIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHR 422 (619)
Q Consensus 356 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 422 (619)
+++++...+ ..++||||+++|+|.+++...... ...+++..+..++.|++.||.|||++ +|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 999987765 489999999999999999864432 22388999999999999999999999 99999
Q ss_pred CCCCCcEEeCCCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCC
Q 007073 423 DVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 500 (619)
Q Consensus 423 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~ 500 (619)
||||+||+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999876443322 2334567889999999999999999999999999999999 999986
Q ss_pred CCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 501 FSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...... .. ......... ...+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 253 ~~~~~~----~~---~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 253 GVKIDE----EF---CRRLKEGTR----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp TCCCSH----HH---HHHHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccchhH----HH---HHHhccCcc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 533211 11 111111111 011122335789999999999999999999999999874
No 67
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.6e-42 Score=341.49 Aligned_cols=256 Identities=26% Similarity=0.391 Sum_probs=210.7
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
..++|.+.+.||+|+||.||+|.+.+++.||+|++.... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 356788899999999999999999888999999997533 235789999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++.... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCTTCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCCcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 999999999997632 3488999999999999999999999 9999999999999999999999999999865432
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
.........++..|+|||.+.+..++.++||||||+++|||+| |+.||...... ...........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~i~~~~~------ 223 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFR------ 223 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC------
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--------HHHHHHhcCCc------
Confidence 2222233457789999999998999999999999999999999 89998643211 11111111100
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 224 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 224 ----LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011122345789999999999999999999999999874
No 68
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.3e-41 Score=356.55 Aligned_cols=254 Identities=22% Similarity=0.259 Sum_probs=200.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcce
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 367 (619)
..++|++.++||+|+||+||+|+.+ +++.||||++++.. .......+..|..++.++ +||||+++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 4568999999999999999999975 57899999997532 222335678899999877 8999999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+++|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 130 lV~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 9999999999999987643 389999999999999999999999 999999999999999999999999999985
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
.... ........||+.|+|||++.+..++.++|||||||++|||+||+.||..........................
T Consensus 203 ~~~~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-- 279 (396)
T 4dc2_A 203 GLRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-- 279 (396)
T ss_dssp CCCT-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--
T ss_pred cccC-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--
Confidence 3222 2234456799999999999999999999999999999999999999964322211111111111111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
.++...+.++.+++.+||+.||++||++
T Consensus 280 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 --------RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred --------CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1122334678999999999999999996
No 69
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.9e-42 Score=368.11 Aligned_cols=264 Identities=19% Similarity=0.239 Sum_probs=210.9
Q ss_pred CHHHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeee
Q 007073 285 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCT 361 (619)
Q Consensus 285 ~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 361 (619)
.++++....++|++.++||+|+||+||+|... +++.||||++.+.. .......+.+|..++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34566677889999999999999999999976 57899999986421 1122334889999999999999999999999
Q ss_pred CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcc
Q 007073 362 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGD 441 (619)
Q Consensus 362 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 441 (619)
+.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 999999999999999999999763 23489999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 516 (619)
||+++..............||+.|+|||++. ...++.++|||||||++|||+||+.||...... +..
T Consensus 219 FGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--------~~~ 290 (437)
T 4aw2_A 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--------ETY 290 (437)
T ss_dssp CTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHH
T ss_pred hhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh--------HHH
Confidence 9999877655544455568999999999997 567899999999999999999999999743221 111
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPED--RPAMSEVVR 568 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~ 568 (619)
..+..... ....+ ......+.++.+++.+|+..+|++ ||+++|+++
T Consensus 291 ~~i~~~~~--~~~~p----~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 291 GKIMNHKE--RFQFP----TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHTHHH--HCCCC----SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred Hhhhhccc--cccCC----cccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 11111000 00000 001112357889999999998888 999999875
No 70
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.9e-42 Score=351.64 Aligned_cols=267 Identities=25% Similarity=0.340 Sum_probs=208.6
Q ss_pred CcccCccccCCCceEEEEEeC-----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC--Cccee
Q 007073 296 FSEKNVLGQGGFGKVYRGVLA-----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLL 368 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 368 (619)
|++.+.||+|+||+||++.+. +|+.||||+++........+.+.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488999999999999998753 68899999998665555677899999999999999999999999874 56789
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 99999999999999753 288999999999999999999999 9999999999999999999999999999877
Q ss_pred ccCCcc--eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 449 DVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 449 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
...... ......||..|+|||.+.+..++.++||||||+++|||+||+.||......... ...+...........
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~ 261 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE---LIGIAQGQMTVLRLT 261 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH---HHCSCCHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh---hhcccccchhHHHHH
Confidence 544322 223445788899999999999999999999999999999999998643211000 000000000000111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..+........+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 308 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 11111112222334456899999999999999999999999999873
No 71
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5.1e-41 Score=350.00 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=205.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC----CCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF----ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.+.|++.+.||+|+||+||+|... +|+.||||++... ......+.+.+|+.+++.++||||+++++++...+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 457999999999999999999975 6899999998531 11224678999999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEccccc
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGL 444 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGl 444 (619)
+||||+++|+|.+.+.........+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988876544445589999999999999999999999 9999999999999986654 99999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
++....... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||..... .. ........
T Consensus 180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~---~~~i~~~~- 248 (351)
T 3c0i_A 180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RL---FEGIIKGK- 248 (351)
T ss_dssp CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH------HH---HHHHHHTC-
T ss_pred eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH------HH---HHHHHcCC-
Confidence 987654322 23345699999999999999999999999999999999999999964211 11 11111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ..+... ...+..+.+++.+||+.||++|||+.++++
T Consensus 249 ~~--~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 249 YK--MNPRQW----SHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CC--CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC--CCcccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 000000 112357899999999999999999999985
No 72
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.6e-41 Score=349.18 Aligned_cols=253 Identities=20% Similarity=0.246 Sum_probs=205.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc-----chHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-----GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
..+.|.+.+.||+|+||.||+|... +|+.||+|.+...... ...+.+.+|+.++++++||||+++++++.....
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3467999999999999999999975 6899999999754322 235789999999999999999999999999999
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEcc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF----EAVVGD 441 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~D 441 (619)
.++||||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++ .+||+|
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTC----SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 99999999999999999753 3489999999999999999999999 999999999999998876 799999
Q ss_pred cccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...... ........
T Consensus 163 FG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--------~~~~~i~~ 232 (361)
T 2yab_A 163 FGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITA 232 (361)
T ss_dssp CSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHT
T ss_pred cCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHh
Confidence 99998765432 234457999999999999999999999999999999999999999643211 11111111
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. . -.+... ....+..+.+++.+|++.||++|||+.|+++
T Consensus 233 ~~-~--~~~~~~----~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 233 VS-Y--DFDEEF----FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp TC-C--CCCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cC-C--CCCchh----ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 0 000000 0112357889999999999999999999885
No 73
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.6e-42 Score=345.33 Aligned_cols=259 Identities=28% Similarity=0.418 Sum_probs=211.1
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
+++..++|.+.+.||+|+||.||+|...++..||||.++... ...+.+.+|++++++++||||+++++++. .+..++
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 84 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI 84 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEE
Confidence 345567899999999999999999999888899999986432 34678999999999999999999999886 456899
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 85 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 159 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI 159 (279)
T ss_dssp EEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence 999999999999997532 12488999999999999999999999 9999999999999999999999999999877
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
............++..|+|||.+.+..++.++||||||+++|||+| |+.||...... +..........
T Consensus 160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~--- 228 (279)
T 1qpc_A 160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLERGYR--- 228 (279)
T ss_dssp SSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC---
T ss_pred cCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHhcccC---
Confidence 5443333334457889999999998899999999999999999999 89998643211 11111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+..+.+++.+|++.||++|||+.++++.|+..
T Consensus 229 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 229 -------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 111222346789999999999999999999999999873
No 74
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=344.15 Aligned_cols=250 Identities=24% Similarity=0.326 Sum_probs=195.8
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc-------------------------chHHHHHHHHHHHH
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-------------------------GGDAAFQREVEMIS 346 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-------------------------~~~~~~~~E~~~l~ 346 (619)
.++|.+.+.||+|+||.||+|... +|+.||||++...... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467999999999999999999964 6899999998643211 12356889999999
Q ss_pred HccCCCccceeeeeeC--CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 007073 347 VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDV 424 (619)
Q Consensus 347 ~l~H~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 424 (619)
+++||||+++++++.. ....++||||+++++|.+++.. ..+++..+..++.|+++||+|||++ +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 4568999999999999876543 3489999999999999999999999 9999999
Q ss_pred CCCcEEeCCCCcEEEcccccceeeccCCcceeeeccccccccccccccCCC---CCcchhhHHHHHHHHHHHhCCCCCCC
Q 007073 425 KAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK---SSERTDVFGYGIMLLELVTGQRAIDF 501 (619)
Q Consensus 425 kp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~S~Gv~l~elltg~~p~~~ 501 (619)
||+||+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||+||+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999987654332 234457999999999997765 37899999999999999999999964
Q ss_pred CccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 502 SRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... ......... .... .......+..+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~--------~~~~~~~~~-~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ERI--------MCLHSKIKS-QALE--------FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SSH--------HHHHHHHHH-CCCC--------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccH--------HHHHHHHhc-ccCC--------CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 321 111111111 1100 0001122357899999999999999999999874
No 75
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.4e-41 Score=342.78 Aligned_cols=257 Identities=21% Similarity=0.350 Sum_probs=205.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeCC----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
..++|.+.+.||+|+||+||+|.+.+ +..||||.+.........+.+.+|+.++++++||||+++++++.. +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 45789999999999999999998642 346999999765555567889999999999999999999999865 4568
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+++++|.+++.... ..+++..+..++.|+++||.|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 89 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 9999999999999997632 3488999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
.............+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ...... ......
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~---~~~~~~- 233 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVL---EKGDRL- 233 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHH---HHTCCC-
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHH---hcCCCC-
Confidence 65443333344567889999999998999999999999999999999 99999643221 111111 111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 234 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 234 ---------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 11122345789999999999999999999999999874
No 76
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.3e-41 Score=356.28 Aligned_cols=267 Identities=16% Similarity=0.180 Sum_probs=202.1
Q ss_pred HhcCCcccCccccCCCceEEEEEeCC------CcEEEEEEeccCCCcc----------hHHHHHHHHHHHHHccCCCccc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPG----------GDAAFQREVEMISVAVHRNLLR 355 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~ 355 (619)
..++|.+.+.||+|+||+||+|.+.+ ++.||||++....... ....+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999999754 4789999986432100 0012334445566678999999
Q ss_pred eeeeeeCC----CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe
Q 007073 356 LIGFCTTP----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL 431 (619)
Q Consensus 356 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 431 (619)
+++++... ...++||||+ +++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998764 3479999999 99999999763 24489999999999999999999999 99999999999999
Q ss_pred C--CCCcEEEcccccceeeccCCcce------eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCc
Q 007073 432 D--EDFEAVVGDFGLAKLVDVRKTNV------TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSR 503 (619)
Q Consensus 432 ~--~~~~~kl~DfGla~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~ 503 (619)
+ .++.+||+|||+++.+....... .....||+.|+|||.+.+..++.++|||||||++|||+||+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 88999999999998765332211 133459999999999999999999999999999999999999997422
Q ss_pred cccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 504 LEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.. ......... .....+..++++.+.. ...+.++.+++..||+.+|++||++.+|++.|+..
T Consensus 266 ~~----~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 266 KD----PKYVRDSKI-RYRENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp TC----HHHHHHHHH-HHHHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred cC----HHHHHHHHH-HhhhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 11 111111111 1112233333333221 12235789999999999999999999999999874
No 77
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5e-42 Score=349.75 Aligned_cols=265 Identities=24% Similarity=0.356 Sum_probs=207.8
Q ss_pred hcCCcccCccccCCCceEEEEEe-----CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC--Cc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TE 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~ 365 (619)
.+.|+..+.||+|+||.||+|.+ .+|+.||||+++........+.+.+|++++++++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35688899999999999999984 368999999998655555678899999999999999999999999876 56
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 789999999999999996533 3389999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc--eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccc-------cccchhHHHHH
Q 007073 446 KLVDVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLE-------EEDDVLLLDHV 516 (619)
Q Consensus 446 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~-------~~~~~~~~~~~ 516 (619)
......... ......||..|+|||.+.+..++.++||||||+++|||+||+.|+...... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 877544332 223456888899999999999999999999999999999999986432110 00000011111
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.... .......+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 254 ~~~~----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 254 NTLK----------EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHH----------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHh----------ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 1111 1111112333456889999999999999999999999999863
No 78
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.9e-42 Score=364.26 Aligned_cols=260 Identities=20% Similarity=0.249 Sum_probs=208.6
Q ss_pred HHHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeC
Q 007073 286 WRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT 362 (619)
Q Consensus 286 ~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 362 (619)
.+++....++|++.+.||+|+||+||+|... +|+.||+|++.+.. .......+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455667789999999999999999999976 58899999986421 11223457889999999999999999999999
Q ss_pred CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
....++||||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 99999999999999999998752 378899999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCC----CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK----SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
|+++..............||+.|+|||++.+.. ++.++|||||||++|||+||+.||...... .....
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~ 284 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSK 284 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHH
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--------hHHHH
Confidence 999877654444444667999999999997665 789999999999999999999999743221 11111
Q ss_pred HhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 007073 519 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPED--RPAMSEVVR 568 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~ 568 (619)
+...... ...+ .....+.++.+++.+|++.+|++ ||+++||++
T Consensus 285 i~~~~~~--~~~p-----~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 285 IMNHKNS--LTFP-----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHTHHHH--CCCC-----TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred HHhcccc--ccCC-----CcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 1111000 0000 01122357889999999999998 999999885
No 79
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5e-42 Score=353.82 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=203.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcE----EEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTK----VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~----vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.++|++.+.||+|+||+||+|.+. +|+. ||+|.+...........+.+|+.++++++||||+++++++. ....+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 457888999999999999999964 4443 88888765444444567788999999999999999999886 45688
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 999999999999999753 23488889999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 448 VDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 448 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
....... ......||..|+|||.+.+..++.++||||||+++|||+| |+.||...... .... ........
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~---~~~~~~~~ 236 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-----EVPD---LLEKGERL 236 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT-----HHHH---HHHTTCBC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH-----HHHH---HHHcCCCC
Confidence 6543322 2344567889999999999999999999999999999999 99999753321 1111 11111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 237 ----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~ 274 (325)
T 3kex_A 237 ----------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 274 (325)
T ss_dssp ----------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred ----------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111234678899999999999999999999999875
No 80
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=343.03 Aligned_cols=252 Identities=19% Similarity=0.248 Sum_probs=204.8
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc-----chHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-----GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
.+.|.+.+.||+|+||.||+|... +|+.||+|.+...... ...+.+.+|+.++++++||||+++++++......
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456889999999999999999975 6899999998653321 2467899999999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEccc
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF----EAVVGDF 442 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 442 (619)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS----SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 9999999999999999753 3489999999999999999999999 999999999999999887 8999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
|+++...... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .........
T Consensus 163 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~ 232 (326)
T 2y0a_A 163 GLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANVSAV 232 (326)
T ss_dssp TTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHHT
T ss_pred CCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHHhc
Confidence 9998765332 233456999999999999999999999999999999999999999643211 111111110
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. . . ..... ....+..+.+++.+||+.||++|||+.++++
T Consensus 233 ~-~-~-~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 233 N-Y-E-FEDEY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp C-C-C-CCHHH----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C-C-C-cCccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 0 0 00000 0112357889999999999999999999986
No 81
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.2e-42 Score=352.68 Aligned_cols=264 Identities=25% Similarity=0.357 Sum_probs=196.7
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeCC-C---cEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLAD-G---TKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~~-g---~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
+....++|++.+.||+|+||+||+|.+.. + ..||||+++... .....+.+.+|++++++++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 34456789999999999999999999753 3 279999987532 344567899999999999999999999999877
Q ss_pred Ccc------eeEecccccchhhhhhcccCC--CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 364 TER------LLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 364 ~~~------~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
... ++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCC
Confidence 655 899999999999999965432 223589999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007073 436 EAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 513 (619)
.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||+| |+.||...... ...
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~ 249 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-----EIY 249 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHH
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH-----HHH
Confidence 9999999999876433222 2233457889999999999999999999999999999999 89998653321 111
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
........ ...+...+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 250 ---~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 250 ---NYLIGGNR----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp ---HHHHTTCC----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHHhcCCC----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11111110 111223346789999999999999999999999999874
No 82
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-41 Score=341.27 Aligned_cols=256 Identities=25% Similarity=0.343 Sum_probs=208.5
Q ss_pred hcCCcccC-ccccCCCceEEEEEeC---CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 293 TDNFSEKN-VLGQGGFGKVYRGVLA---DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 293 ~~~~~~~~-~lg~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
.++|.+.+ .||+|+||.||+|.+. ++..||||+++........+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 45566666 8999999999999864 57889999998655555678899999999999999999999999 4556899
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++++|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 87 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 99999999999998742 33489999999999999999999999 9999999999999999999999999999877
Q ss_pred ccCCcce--eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 449 DVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 449 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
....... .....||+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~i~~~~-- 230 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGK-- 230 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------HHHHHHHTTC--
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHhcCC--
Confidence 5433322 223346889999999988889999999999999999999 99999643221 1111111111
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus 231 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 231 --------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp --------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0112233446889999999999999999999999999874
No 83
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=342.88 Aligned_cols=251 Identities=18% Similarity=0.231 Sum_probs=205.1
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|.+.+.||+|+||+||+|... +|+.||+|.+... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC--cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 467899999999999999999975 6889999998632 3345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC--CCcEEEcccccceeec
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE--DFEAVVGDFGLAKLVD 449 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~ 449 (619)
|+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++. ++.+||+|||+++...
T Consensus 82 ~~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 82 FISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred eCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 99999999998753 23488999999999999999999999 9999999999999987 7899999999998765
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... +........... .
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~---~ 222 (321)
T 1tki_A 156 PGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--------QIIENIMNAEYT---F 222 (321)
T ss_dssp TTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCC---C
T ss_pred CCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--------HHHHHHHcCCCC---C
Confidence 432 334456999999999999888999999999999999999999999643211 111111111000 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... ....+.++.+++.+|++.||++|||+.|+++
T Consensus 223 ~~~~----~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 223 DEEA----FKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp CHHH----HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Chhh----hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000 0112357899999999999999999999986
No 84
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.1e-42 Score=352.01 Aligned_cols=268 Identities=24% Similarity=0.381 Sum_probs=216.3
Q ss_pred CHHHHHHHhcCCcccCccccCCCceEEEEEeC------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceee
Q 007073 285 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIG 358 (619)
Q Consensus 285 ~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~ 358 (619)
..++++...++|.+.+.||+|+||.||+|.+. +++.||||.+...........+.+|++++++++||||+++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 33455667889999999999999999999864 368899999976555555678999999999999999999999
Q ss_pred eeeCCCcceeEecccccchhhhhhcccC------CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC
Q 007073 359 FCTTPTERLLVYPFMQNLSVAYRLREIK------PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD 432 (619)
Q Consensus 359 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 432 (619)
++...+..++||||+++|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+||+++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEc
Confidence 9999999999999999999999987532 1123478899999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccch
Q 007073 433 EDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDV 510 (619)
Q Consensus 433 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~ 510 (619)
.++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----- 247 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----- 247 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-----
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-----
Confidence 9999999999999865433221 1223356889999999999999999999999999999999 88888643211
Q ss_pred hHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 511 LLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
+......... . .......+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 248 ---~~~~~~~~~~-~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 248 ---QVLRFVMEGG-L---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp ---HHHHHHHTTC-C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred ---HHHHHHHcCC-c---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 1111111111 1 011223345789999999999999999999999999885
No 85
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.8e-41 Score=348.34 Aligned_cols=253 Identities=22% Similarity=0.260 Sum_probs=200.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 368 (619)
.++|++.+.||+|+||.||+|+.. +|+.||+|++++.. .....+.+.+|..++.++ +||||+++++++......++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 367889999999999999999975 68999999997532 233456688999999987 89999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 88 v~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 999999999999997643 388999999999999999999999 9999999999999999999999999999854
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
.... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||..........................
T Consensus 161 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~--- 236 (345)
T 3a8x_A 161 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--- 236 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC---
T ss_pred cCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC---
Confidence 3222 223456799999999999999999999999999999999999999964322111110001111111111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
.++...+..+.+++.+||+.||++||++
T Consensus 237 -------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 -------RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -------CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1122334678999999999999999996
No 86
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.3e-41 Score=341.35 Aligned_cols=264 Identities=20% Similarity=0.255 Sum_probs=200.8
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|++.+.||+|+||+||+|... +|+.||||++.... .......+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57889999999999999999975 68999999997543 33345788899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|++++.+ ..+... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~l~-~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQDLK-KYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSEEHH-HHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCCCHH-HHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9987444 444332 23489999999999999999999999 9999999999999999999999999999876433
Q ss_pred CcceeeeccccccccccccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc--cc---
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK--RL--- 525 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~--- 525 (619)
. .......||+.|+|||.+.+.. ++.++|||||||++|||+||+.|+...... ...+........... ..
T Consensus 155 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 155 V-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV---DDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp C-SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH---HHHHHHHHHHHCCCCTTTCTTG
T ss_pred c-ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH---HHHHHHHHHHhCCCChhhhhhh
Confidence 2 2233456899999999997766 799999999999999999998886432211 111111111111000 00
Q ss_pred chhcc---------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 DAIVD---------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 ~~~~~---------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
....+ ........+.....+.+++.+|++.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000 00001112234567889999999999999999999985
No 87
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.9e-41 Score=344.04 Aligned_cols=267 Identities=23% Similarity=0.319 Sum_probs=191.3
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|++.+.||+|+||+||+|... +|+.||+|+++..........+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467889999999999999999965 6899999999754444455778899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccC--CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 372 FMQNLSVAYRLREIK--PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|++ |+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 58888886532 2223488999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--cccc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE--KRLD 526 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 526 (619)
.... ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... .+.......... ....
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~ 234 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE----QLKLIFDIMGTPNESLWP 234 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCCTTTCG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCChhHhh
Confidence 3222 2234568999999999976 468999999999999999999999997533211 111111111000 0000
Q ss_pred hh-----ccccc------------cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 AI-----VDRNL------------NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 ~~-----~~~~l------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+ ..+.. ........+..+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00 00000 00001122357899999999999999999999875
No 88
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=349.36 Aligned_cols=256 Identities=25% Similarity=0.399 Sum_probs=202.0
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCc----EEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.++|++.+.||+|+||+||+|.+. +++ +||+|.+.........+.+.+|+.++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467899999999999999999964 444 368888876555667888999999999999999999999998754 78
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+|++|+++|+|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 9999999999999997643 3488999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 448 VDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 448 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
....... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||....... .... .....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----~~~~---~~~~~-- 236 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSI---LEKGE-- 236 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHH---HHTTC--
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----HHHH---HHcCC--
Confidence 6433222 2233456889999999999999999999999999999999 999997533211 1111 11111
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 237 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 237 --------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp --------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111223345789999999999999999999999999875
No 89
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.9e-41 Score=340.25 Aligned_cols=263 Identities=22% Similarity=0.325 Sum_probs=199.4
Q ss_pred cCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|++.+.||+|+||+||+|...+|+.||+|++..... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57889999999999999999998899999999864332 22346788999999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
+++ +|.+++.... ..++...+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 8888886532 3488899999999999999999999 99999999999999999999999999998654322
Q ss_pred cceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc--ccch--
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK--RLDA-- 527 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-- 527 (619)
.......||+.|+|||.+.+. .++.++|||||||++|||+||+.||...... ..+........... ....
T Consensus 155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA----DQLMRIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTGG
T ss_pred -cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHHCCCChhhchhhh
Confidence 122344689999999998764 5899999999999999999999999743211 11111111110000 0000
Q ss_pred ---hcccccc-------CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 ---IVDRNLN-------KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ---~~~~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..++... .......+..+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000 0011223467889999999999999999999875
No 90
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-41 Score=347.37 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=202.9
Q ss_pred hcCCcccCccccCCCceEEEEEeCC-----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD-----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.++|...+.||+|+||.||+|.+.. +..||||.++..........+.+|++++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 4567778999999999999998642 24699999976555555678999999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 999999999999999763 23489999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcc--eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 448 VDVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 448 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
....... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +..........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~~ 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--------EVMKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHCCCc
Confidence 6543221 1223346788999999999999999999999999999999 99998643211 11111111111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus 269 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 269 ----------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp ----------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ----------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111223346789999999999999999999999999874
No 91
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1e-41 Score=374.71 Aligned_cols=261 Identities=26% Similarity=0.385 Sum_probs=212.8
Q ss_pred HHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 288 ELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 288 el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
.+++..++|.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++||||+++++++.. +..+
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~ 337 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 337 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence 3455677889999999999999999999888899999997533 345789999999999999999999999876 6789
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+++|+|.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 338 lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 412 (535)
T ss_dssp EEECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred EeeehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccccccee
Confidence 9999999999999997532 13388999999999999999999999 999999999999999999999999999986
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
.............++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +....+....++
T Consensus 413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~- 483 (535)
T 2h8h_A 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYRM- 483 (535)
T ss_dssp CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--------HHHHHHHTTCCC-
T ss_pred cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCC-
Confidence 54322222233456789999999999999999999999999999999 89998643211 111222111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
..+...+..+.+++.+||+.||++|||+.+|+++|+...
T Consensus 484 ---------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 484 ---------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 112233467899999999999999999999999999853
No 92
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.6e-41 Score=358.85 Aligned_cols=254 Identities=18% Similarity=0.227 Sum_probs=204.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
..++|++.+.||+|+||+||+|... +|+.||+|++..... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4567999999999999999999964 789999999865432 23456788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC---CCCcEEEcccccce
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAK 446 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla~ 446 (619)
|||+++|+|.+.+... ..+++.....++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||+++
T Consensus 89 ~E~~~gg~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 9999999999998763 3389999999999999999999999 999999999999998 56789999999998
Q ss_pred eeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... . ......... ...
T Consensus 162 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-----~---~~~~~i~~~-~~~ 231 (444)
T 3soa_A 162 EVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-----H---RLYQQIKAG-AYD 231 (444)
T ss_dssp CCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----H---HHHHHHHHT-CCC
T ss_pred EecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-----H---HHHHHHHhC-CCC
Confidence 7654322 23346799999999999999999999999999999999999999964321 1 111111111 000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.........+..+.+++.+||+.||++|||+.|+++
T Consensus 232 ------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 232 ------FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ------CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000011223467899999999999999999999986
No 93
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.4e-41 Score=338.44 Aligned_cols=254 Identities=21% Similarity=0.287 Sum_probs=201.4
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|.+.+.||+|+||+||+|... +|..||+|++.........+.+.+|++++++++||||+++++++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 467889999999999999999974 6899999999765555567889999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEcccccceee
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~~ 448 (619)
|+++|+|.+.+.........+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999999876543345589999999999999999999999 99999999999999 45688999999999865
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
.... ......||+.|+|||.+. +.++.++||||||+++|||+||+.||...... ..............
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~~~- 245 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--------EVQQKATYKEPNYA- 245 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCC-
T ss_pred CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--------HHHhhhccCCcccc-
Confidence 4332 233456899999999885 57899999999999999999999999743221 11111111100000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~-------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 VE-------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C---------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cc-------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0012357889999999999999999999985
No 94
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.5e-41 Score=351.85 Aligned_cols=250 Identities=23% Similarity=0.309 Sum_probs=203.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... .......+.+|+++++.++|||||++++++...+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467899999999999999999975 58899999986421 233457788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+.+|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN----VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp ECCCTTEEHHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 9999999999999753 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeeeccccccccccccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLST---GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
.. .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... ............
T Consensus 167 ~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-----~~~~~~~~~~~~--- 236 (384)
T 4fr4_A 167 RE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-----SKEIVHTFETTV--- 236 (384)
T ss_dssp TT--CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-----HHHHHHHHHHCC---
T ss_pred CC--CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc-----HHHHHHHHhhcc---
Confidence 33 22345679999999999964 458999999999999999999999997432211 111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-HHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA-MSEVV 567 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl 567 (619)
..++...+..+.+++.+||+.||++||+ ++++.
T Consensus 237 --------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 237 --------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp --------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred --------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 1112233467899999999999999998 66654
No 95
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.6e-41 Score=340.02 Aligned_cols=252 Identities=22% Similarity=0.315 Sum_probs=204.7
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC--CcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 369 (619)
.++|.+.+.||+|+||+||+|.+. |+.||||+++... .....+.|.+|+.++++++||||+++++++..+ ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 467888999999999999999985 8999999997543 334457799999999999999999999999887 678999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK--IIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||++ + |+||||||+||+++.++.++|+|||++..
T Consensus 88 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ecccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999998632 23589999999999999999999998 7 99999999999999999999999998764
Q ss_pred eccCCcceeeeccccccccccccccCCCCCc---chhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE---RTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
... ....||+.|+|||.+.+..++. ++||||||+++|||+||+.||...... ..........
T Consensus 163 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~- 227 (271)
T 3kmu_A 163 FQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM--------EIGMKVALEG- 227 (271)
T ss_dssp TSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--------HHHHHHHHSC-
T ss_pred ecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--------HHHHHHHhcC-
Confidence 322 2245899999999998765544 899999999999999999999643211 1111111111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.....+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 228 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 228 --------LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 11112223346789999999999999999999999999874
No 96
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.7e-40 Score=334.70 Aligned_cols=261 Identities=18% Similarity=0.241 Sum_probs=201.9
Q ss_pred HhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeee-eCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC-TTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv 369 (619)
..++|.+.+.||+|+||+||+|.. .+++.||||++..... ...+.+|+++++.++|++++..++++ ......++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 457899999999999999999996 5789999998754322 23578899999999998888777766 556677999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEcccccce
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAK 446 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~ 446 (619)
|||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 84 ~e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEcc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 9999 999999987532 3489999999999999999999999 99999999999999 788999999999998
Q ss_pred eeccCCcc------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh
Q 007073 447 LVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 447 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
........ ......||+.|+|||.+.+..++.++|||||||++|||+||+.||........... ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~ 234 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK--YERISEKK 234 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH--HHHHHHHH
T ss_pred eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh--hhhhhccc
Confidence 77543321 22345789999999999999999999999999999999999999975433222111 11111111
Q ss_pred hhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 521 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
........ ....+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 235 ~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 235 MSTPIEVL---------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHSCHHHH---------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred ccchhhhh---------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 11000000 011235789999999999999999999999999873
No 97
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=350.15 Aligned_cols=253 Identities=22% Similarity=0.312 Sum_probs=197.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccC--CCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVH--RNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~l 368 (619)
..++|++.+.||+|+||.||++...+++.||||++.... .....+.+.+|++++++++| +||+++++++......++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 346789999999999999999999889999999986433 33345788999999999986 999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||| +.+++|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++ ++.+||+|||+++..
T Consensus 87 v~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEC-CCSEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEe-CCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 999 5688999999863 2488999999999999999999999 999999999999997 578999999999876
Q ss_pred ccCCcc-eeeeccccccccccccccC-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007073 449 DVRKTN-VTTQVRGTMGHIAPEYLST-----------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 449 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 516 (619)
...... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... ....
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~ 230 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKL 230 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-------HHHH
Confidence 543322 2334579999999999864 67899999999999999999999999632110 0111
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
. .+.++.....++......+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~---------~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 231 H---------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp H---------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H---------HHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1 1111111111222223578899999999999999999999853
No 98
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.5e-40 Score=347.63 Aligned_cols=254 Identities=20% Similarity=0.258 Sum_probs=205.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
..++|.+.+.||+|+||.||+|... +|+.||+|++.... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567999999999999999999975 68999999997533 233456788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEEcccccce
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED---FEAVVGDFGLAK 446 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGla~ 446 (619)
|||+++|+|.+.+... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||++.
T Consensus 107 ~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp ECCCCSCBHHHHHTTC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 9999999999988753 3488999999999999999999999 99999999999999865 459999999998
Q ss_pred eeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... . ......... ...
T Consensus 180 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-----~---~~~~~i~~~-~~~ 248 (362)
T 2bdw_A 180 EVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----H---RLYAQIKAG-AYD 248 (362)
T ss_dssp CCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----H---HHHHHHHHT-CCC
T ss_pred EecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----H---HHHHHHHhC-CCC
Confidence 765332 23345799999999999999999999999999999999999999964321 1 111111111 000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.. .......+..+.+++.+||+.||++|||+.++++.
T Consensus 249 -~~-----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 -YP-----SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -CC-----TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -CC-----cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 00011224578999999999999999999999853
No 99
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.4e-41 Score=354.61 Aligned_cols=274 Identities=18% Similarity=0.210 Sum_probs=214.8
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC--cceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT--ERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv 369 (619)
.++|.+.+.||+|+||+||+|.+. +|+.||||++.........+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467899999999999999999976 589999999976544455678889999999999999999999998765 67899
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEEEcccccc
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL----DEDFEAVVGDFGLA 445 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGla 445 (619)
|||+++|+|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999986432 23389999999999999999999999 99999999999999 78888999999999
Q ss_pred eeeccCCcceeeeccccccccccccccC--------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLST--------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
+...... ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||..................
T Consensus 164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp EECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred eEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 8764432 2334569999999999865 56788999999999999999999999643322222111111111
Q ss_pred HHhhhcccchh---cc--------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 518 KLEREKRLDAI---VD--------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 518 ~~~~~~~~~~~---~~--------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
. ........+ .. -.............+.+++.+||+.||++||++.++++.++++
T Consensus 242 ~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 242 G-KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp S-CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred C-CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 1 111000000 00 0111234577888999999999999999999999999988874
No 100
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=375.94 Aligned_cols=255 Identities=25% Similarity=0.351 Sum_probs=203.3
Q ss_pred cCCcccC-ccccCCCceEEEEEeC---CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 294 DNFSEKN-VLGQGGFGKVYRGVLA---DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 294 ~~~~~~~-~lg~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
+++.+.+ .||+|+||.||+|.+. ++..||||+++........+.|.+|++++++++|||||++++++.. +..++|
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 3444444 7999999999999864 4678999999866555667899999999999999999999999976 568999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 414 ~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EECCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEeCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 9999999999999753 34589999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCccee--eeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 450 VRKTNVT--TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 450 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
....... ....+++.|+|||++.+..++.++|||||||++|||+| |+.||...... +....+....+
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~~i~~~~~-- 557 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGKR-- 557 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--------HHHHHHHTTCC--
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------HHHHHHHcCCC--
Confidence 3332221 22345689999999999999999999999999999998 99999753221 11112211111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+..+.+++.+||+.||++||++.+|++.|+..
T Consensus 558 --------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 558 --------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp --------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred --------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 112233456889999999999999999999999999873
No 101
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=344.58 Aligned_cols=247 Identities=21% Similarity=0.224 Sum_probs=193.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 368 (619)
..++|+..+.||+|+||+||+|... +|+.||||++.... .......+..|+..+.++ +||||+++++++...+..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 3467999999999999999999976 79999999986433 223344556666666555 89999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 135 v~e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 99999 668888877642 3489999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
.... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... ....... ..
T Consensus 208 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-----------~~~~~~~-~~--- 269 (311)
T 3p1a_A 208 GTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-----------WQQLRQG-YL--- 269 (311)
T ss_dssp C--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-----------HHHHTTT-CC---
T ss_pred ccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-----------HHHHhcc-CC---
Confidence 4332 2334569999999999875 799999999999999999999776542110 1111110 00
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.+.. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 270 -~~~~----~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 270 -PPEF----TAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -Cccc----ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0001 1122367899999999999999999999985
No 102
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-41 Score=354.80 Aligned_cols=255 Identities=29% Similarity=0.428 Sum_probs=195.0
Q ss_pred CCcccCccccCCCceEEEEEeC--CC--cEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC-CCcceeE
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA--DG--TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT-PTERLLV 369 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~--~g--~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv 369 (619)
.|...+.||+|+||+||+|.+. ++ ..||||.++........+.|.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4667789999999999999963 22 46899998765556667889999999999999999999998754 4578899
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|.+++... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999753 23478899999999999999999999 99999999999999999999999999998664
Q ss_pred cCCcc---eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 450 VRKTN---VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 450 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
..... ......+|+.|+|||.+.+..++.++|||||||++|||+| |..||....... ... ........
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~-----~~~---~~~~~~~~ 315 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-----ITV---YLLQGRRL 315 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC-----HHH---HHHTTCCC
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH-----HHH---HHHcCCCC
Confidence 33211 1233457889999999999999999999999999999999 666765432111 111 11111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 316 ----------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 316 ----------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 01122345789999999999999999999999999874
No 103
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7e-41 Score=339.27 Aligned_cols=262 Identities=28% Similarity=0.457 Sum_probs=197.5
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
++..++|++.+.||+|+||+||+|.+. ..||||+++... .....+.|.+|++++++++||||+++++++ .....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 345678999999999999999999974 369999987443 334457899999999999999999999965 4566899
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 97 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence 99999999999998653 34489999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCC-cceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 449 DVRK-TNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 449 ~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
.... ........||+.|+|||.+. +..++.++||||||+++|||+||+.||...... ......... ..
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~----~~ 242 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR----DQIIEMVGR----GS 242 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH----HHHHHHHHH----TS
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH----HHHHHHhcc----cc
Confidence 4322 22233456899999999986 567899999999999999999999999643211 111111111 11
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
... .+ .......+..+.+++.+||+.||++|||+.++++.|+++
T Consensus 243 ~~~----~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l 286 (289)
T 3og7_A 243 LSP----DL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286 (289)
T ss_dssp CCC----CT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred cCc----ch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 110 00 111223346789999999999999999999999999875
No 104
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.6e-41 Score=344.11 Aligned_cols=262 Identities=22% Similarity=0.363 Sum_probs=201.2
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... .......+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35789999999999999999996 479999999987432 334557789999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++.........++...+..++.|+++||.|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999976544455689999999999999999999999 99999999999999999999999999998664
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.... ......|++.|+|||.+.+..++.++||||||+++|||+||+.||...... ............ ..
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~-~~--- 256 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQCD-YP--- 256 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC------HHHHHHHHHTTC-SC---
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh------HHHHHHHhhccc-CC---
Confidence 3322 223446899999999999999999999999999999999999998643211 111122211111 10
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.......+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 257 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l 295 (310)
T 2wqm_A 257 -----PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295 (310)
T ss_dssp -----CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 001122345789999999999999999999999999875
No 105
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=359.42 Aligned_cols=263 Identities=19% Similarity=0.228 Sum_probs=208.2
Q ss_pred CHHHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeee
Q 007073 285 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCT 361 (619)
Q Consensus 285 ~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 361 (619)
.+++.....++|++.+.||+|+||+||+|..+ +|+.||||++.+.. .....+.+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34566667889999999999999999999975 79999999986421 1122345788999999999999999999999
Q ss_pred CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcc
Q 007073 362 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGD 441 (619)
Q Consensus 362 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 441 (619)
+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 9999999999999999999997642 2488999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeeecccccccccccccc-------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS-------TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 514 (619)
||+++..............||+.|+|||++. ...++.++|||||||++|||+||+.||...... +
T Consensus 206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~ 277 (412)
T 2vd5_A 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--------E 277 (412)
T ss_dssp CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------H
T ss_pred chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--------H
Confidence 9999877654443444567999999999997 456899999999999999999999999643221 1
Q ss_pred HHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCC---CCHHHHHH
Q 007073 515 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDR---PAMSEVVR 568 (619)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~ 568 (619)
....+..... ....+ ......+.++.+++.+|+. +|++| |+++|+++
T Consensus 278 ~~~~i~~~~~--~~~~p----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 278 TYGKIVHYKE--HLSLP----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHTHHH--HCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHhccc--CcCCC----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1111111000 00000 0112234678999999999 99998 58888763
No 106
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.2e-41 Score=345.49 Aligned_cols=265 Identities=25% Similarity=0.342 Sum_probs=207.9
Q ss_pred HhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeee----CCCcc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT----TPTER 366 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~----~~~~~ 366 (619)
..++|++.+.||+|+||.||++.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++. .....
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 456899999999999999999997 57999999988642 3445678899999999999999999999986 33467
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++|+|.+++.........+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 899999999999999987655556699999999999999999999999 99999999999999999999999999987
Q ss_pred eeccCCcc--------eeeeccccccccccccccCCC---CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007073 447 LVDVRKTN--------VTTQVRGTMGHIAPEYLSTGK---SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 515 (619)
Q Consensus 447 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 515 (619)
........ ......||+.|+|||.+.+.. ++.++||||||+++|||+||+.||......... ....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~ 259 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS---VALA 259 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC---HHHH
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch---hhHH
Confidence 65321110 012345799999999987654 689999999999999999999998532111100 0000
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcc
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLA 576 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 576 (619)
.. . ..........+..+.+++.+||+.||++|||+.++++.|+.....
T Consensus 260 ~~---~----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 260 VQ---N----------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp HH---C----------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred hh---c----------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 00 0 000111122346789999999999999999999999999987543
No 107
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=353.43 Aligned_cols=246 Identities=26% Similarity=0.333 Sum_probs=196.8
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcc
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 366 (619)
...++|++.+.||+|+||+||+|... +|+.||||++++.. .......+.+|..+++.+ +||||+++++++...+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 45578999999999999999999975 68999999986421 223456788999999988 699999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccccee
Confidence 99999999999999997643 389999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
..... ........||+.|+|||++.+..++.++|||||||++|||+||+.||...... +........
T Consensus 173 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~---- 239 (353)
T 3txo_A 173 EGICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILND---- 239 (353)
T ss_dssp CSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC----
T ss_pred ecccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--------HHHHHHHcC----
Confidence 54322 22334567999999999999888999999999999999999999999743221 111111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
.. .++......+.+++.+|++.||++||++
T Consensus 240 -----~~--~~p~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 240 -----EV--VYPTWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp -----CC--CCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred -----CC--CCCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence 00 1122234578899999999999999998
No 108
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-41 Score=342.98 Aligned_cols=254 Identities=26% Similarity=0.400 Sum_probs=197.6
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
.++|++.+.||+|+||+||+|.+. ++.||||++.. ....+.|.+|++++++++||||+++++++. +..++||||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS---TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC---hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 357888999999999999999985 78999999863 345678999999999999999999999887 458999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc-EEEcccccceeeccC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-AVVGDFGLAKLVDVR 451 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~DfGla~~~~~~ 451 (619)
+++|+|.+++..... ...+++..+..++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999976432 234788889999999999999999932228999999999999988876 799999999755322
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.....||+.|+|||.+.+..++.++||||||+++|||+||+.||+...... ............
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~------- 222 (307)
T 2eva_A 160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA------FRIMWAVHNGTR------- 222 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH------HHHHHHHHTTCC-------
T ss_pred ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH------HHHHHHHhcCCC-------
Confidence 223458999999999999999999999999999999999999996432110 011111111110
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.......+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 223 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 223 ---PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261 (307)
T ss_dssp ---CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 011122335788999999999999999999999999875
No 109
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.1e-41 Score=348.56 Aligned_cols=246 Identities=23% Similarity=0.317 Sum_probs=201.1
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|.+.+.||+|+||.||+|.+ .+|+.||||++.... .......+.+|+.+++.++||||+++++++..+...++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5789999999999999999997 578999999986321 1222457889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+ +|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 89 E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 678888886543 389999999999999999999999 999999999999999999999999999986543
Q ss_pred CCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.. ......||+.|+|||.+.+..+ +.++|||||||++|+|+||+.||+........ ..+.
T Consensus 161 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-----------------~~i~ 221 (336)
T 3h4j_B 161 GN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----------------KKVN 221 (336)
T ss_dssp SB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-----------------CCCC
T ss_pred Cc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-----------------HHHH
Confidence 32 2334569999999999988776 78999999999999999999999753322110 0111
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... ...+...+..+.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 222 SCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp SSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 100 0112223467889999999999999999999975
No 110
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-41 Score=339.87 Aligned_cols=256 Identities=29% Similarity=0.374 Sum_probs=203.8
Q ss_pred CCcccCccccCCCceEEEEEeC-C---CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc-eeE
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLA-D---GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER-LLV 369 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~-~---g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lv 369 (619)
.|...+.||+|+||+||+|.+. + +..||+|.+.........+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999853 2 2379999997655555668899999999999999999999999876665 899
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
+||+.+|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 9999999999999762 33478999999999999999999999 99999999999999999999999999998654
Q ss_pred cCC---cceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 450 VRK---TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 450 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
... ........+|+.|+|||.+.+..++.++||||||+++|||+||..|+...... ........ ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~---~~~~-- 246 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFLA---QGRR-- 246 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHHH---TTCC--
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHhh---cCCC--
Confidence 322 11223456789999999999999999999999999999999966665322111 11111111 1110
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 247 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 247 --------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111222345789999999999999999999999999874
No 111
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.1e-40 Score=335.40 Aligned_cols=260 Identities=19% Similarity=0.243 Sum_probs=204.7
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeee-eCCCcceeEe
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC-TTPTERLLVY 370 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv~ 370 (619)
.++|.+.+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|+.+++.++|++++..++++ ......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 46899999999999999999996 5799999999864332 34688999999999998877777666 4556679999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC---CCCcEEEccccccee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAKL 447 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla~~ 447 (619)
||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 999 899999997532 3489999999999999999999999 999999999999994 788999999999987
Q ss_pred eccCCcc------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 448 VDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 448 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
....... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||........... . ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~-~~~~~~~~ 235 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK-Y-ERISEKKM 235 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH-H-HHHHHHHH
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhh-h-hhhccccc
Confidence 7544321 12345799999999999999999999999999999999999999975433222111 1 11111110
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
...... + ....+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 236 ~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 236 STPIEV-----L----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HSCHHH-----H----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred CCchHH-----H----HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 000000 0 011235789999999999999999999999999873
No 112
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.2e-41 Score=342.12 Aligned_cols=260 Identities=25% Similarity=0.350 Sum_probs=206.4
Q ss_pred HHHHHhcCCcccC-ccccCCCceEEEEEe---CCCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeC
Q 007073 288 ELQLATDNFSEKN-VLGQGGFGKVYRGVL---ADGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTT 362 (619)
Q Consensus 288 el~~~~~~~~~~~-~lg~G~fg~Vy~~~~---~~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 362 (619)
++....++|.+.+ .||+|+||+||+|.+ .+++.||||+++.... ....+.+.+|+++++.++||||+++++++ .
T Consensus 10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~ 88 (291)
T 1xbb_A 10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 88 (291)
T ss_dssp -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence 3344566788887 999999999999964 2478899999975432 33467899999999999999999999999 5
Q ss_pred CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
.+..++||||+++++|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Df 161 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDF 161 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCC
T ss_pred CCCcEEEEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccC
Confidence 56788999999999999999763 2388999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCccee--eeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHH
Q 007073 443 GLAKLVDVRKTNVT--TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKL 519 (619)
Q Consensus 443 Gla~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 519 (619)
|++........... ....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.....
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~ 233 (291)
T 1xbb_A 162 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAML 233 (291)
T ss_dssp TTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHH
T ss_pred CcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHH
Confidence 99987754433222 22346789999999998889999999999999999999 99998643211 111111
Q ss_pred hhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 520 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
..... ...+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus 234 ~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 234 EKGER----------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HTTCC----------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HcCCC----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11110 111223346789999999999999999999999999873
No 113
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=9e-41 Score=349.33 Aligned_cols=253 Identities=21% Similarity=0.249 Sum_probs=194.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..++|.+.+.||+|+||+||++... +|+.||||++.... ...+.+.+|+.+++.++||||+++++++..+...++||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 3568999999999999999999976 78999999997533 23466889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--EEEcccccceee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE--AVVGDFGLAKLV 448 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfGla~~~ 448 (619)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++..
T Consensus 96 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 96 EYASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EeCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 9999999999987643 389999999999999999999999 9999999999999987765 999999999743
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcc-hhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSER-TDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
... .......||+.|+|||.+.+..++.+ +|||||||++|||+||+.||........ ............
T Consensus 169 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~~~~~~~~~~---- 238 (361)
T 3uc3_A 169 VLH--SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD----YRKTIQRILSVK---- 238 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC----HHHHHHHHHTTC----
T ss_pred ccc--CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH----HHHHHHHHhcCC----
Confidence 222 22234569999999999988887665 8999999999999999999975332111 111111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.........+..+.+++.+||+.||++|||+.|+++
T Consensus 239 -----~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 239 -----YSIPDDIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp -----CCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred -----CCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 000001112357889999999999999999999985
No 114
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=6.8e-41 Score=348.32 Aligned_cols=269 Identities=17% Similarity=0.194 Sum_probs=200.9
Q ss_pred hcCCcccCccccCCCceEEEEEeC----CCcEEEEEEeccCCCcc----------hHHHHHHHHHHHHHccCCCccceee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPG----------GDAAFQREVEMISVAVHRNLLRLIG 358 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~l~~ 358 (619)
.++|.+.+.||+|+||.||+|... ++..||||+........ ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467899999999999999999975 57889999986533211 1124667888899999999999999
Q ss_pred eeeC----CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC
Q 007073 359 FCTT----PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED 434 (619)
Q Consensus 359 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 434 (619)
++.. ....++||||+ +++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9877 67789999999 999999998643 589999999999999999999999 99999999999999887
Q ss_pred C--cEEEcccccceeeccCCcc------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccc
Q 007073 435 F--EAVVGDFGLAKLVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEE 506 (619)
Q Consensus 435 ~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~ 506 (619)
+ .+||+|||+++.+...... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~- 266 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD- 266 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC-
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc-
Confidence 7 9999999999876432211 113456999999999999999999999999999999999999999532111
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCccc
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAE 577 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 577 (619)
.... ......... .....+..... ....+..+.+++.+||+.||++|||+.+|++.|+...+..
T Consensus 267 --~~~~-~~~~~~~~~-~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 330 (345)
T 2v62_A 267 --PVAV-QTAKTNLLD-ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPL 330 (345)
T ss_dssp --HHHH-HHHHHHHHH-TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred --cHHH-HHHHHhhcc-cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcc
Confidence 1111 111111111 01110100000 0122357899999999999999999999999999866543
No 115
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-40 Score=344.42 Aligned_cols=262 Identities=20% Similarity=0.208 Sum_probs=202.5
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC----CCcchHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF----ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
+....++|.+.+.||+|+||.||+|... +++.||+|++... ......+.+.+|++++++++||||+++++++...
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456778999999999999999999974 6889999998632 1345567899999999999999999999999999
Q ss_pred CcceeEecccccchhhhhhcccCCC------------------------------------CCCcCHHHHHHHHHHHHHH
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPG------------------------------------EPVLDWVTRKRVALGAARG 407 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~~ 407 (619)
+..++||||+++|+|.+++...... ...+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999998632111 1224567788899999999
Q ss_pred HHHHHhcCCCCeEecCCCCCcEEeCCCC--cEEEcccccceeeccCCcc---eeeeccccccccccccccC--CCCCcch
Q 007073 408 LEYLHEHCNPKIIHRDVKAANVLLDEDF--EAVVGDFGLAKLVDVRKTN---VTTQVRGTMGHIAPEYLST--GKSSERT 480 (619)
Q Consensus 408 L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~ 480 (619)
|+|||++ +|+||||||+||+++.++ .+||+|||+++........ ......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 8999999999876432221 2345569999999999975 6789999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCC
Q 007073 481 DVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDR 560 (619)
Q Consensus 481 Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R 560 (619)
||||||+++|||+||+.||...... +........... ...+ .....+..+.+++.+||+.||++|
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~li~~~l~~~p~~R 322 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA--------DTISQVLNKKLC--FENP-----NYNVLSPLARDLLSNLLNRNVDER 322 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCC--TTSG-----GGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhcccc--cCCc-----ccccCCHHHHHHHHHHcCCChhHC
Confidence 9999999999999999999643321 111111111100 0000 011224578999999999999999
Q ss_pred CCHHHHHH
Q 007073 561 PAMSEVVR 568 (619)
Q Consensus 561 Ps~~evl~ 568 (619)
||+.++++
T Consensus 323 ps~~~~l~ 330 (345)
T 3hko_A 323 FDAMRALQ 330 (345)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHhc
Confidence 99999986
No 116
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.5e-40 Score=334.20 Aligned_cols=253 Identities=22% Similarity=0.294 Sum_probs=205.8
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|++.+.||+|+||.||+|... +|+.||||.+.........+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467899999999999999999975 7899999998754445566889999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++... ..++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+......
T Consensus 86 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 99999999988652 3488999999999999999999999 9999999999999999999999999999876433
Q ss_pred Cc-ceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 452 KT-NVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 452 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.. .......||+.|+|||.+.+..+ +.++||||||+++|||+||+.||....... .....+ ...... .
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~----~~~~~~---~ 228 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDW----KEKKTY---L 228 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS---HHHHHH----HTTCTT---S
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHh----hhcccc---c
Confidence 22 12334568999999999987765 789999999999999999999997533211 111111 110000 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 ------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 001122357889999999999999999999875
No 117
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.5e-41 Score=341.47 Aligned_cols=257 Identities=28% Similarity=0.390 Sum_probs=202.3
Q ss_pred hcCCcccCccccCCCceEEEEEeCC----CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeee-CCCcce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT-TPTERL 367 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~ 367 (619)
..+|.+.+.||+|+||+||+|.+.+ +..||+|.+.........+.+.+|+.++++++||||+++++++. .+...+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3468888999999999999999642 23689999976555556788999999999999999999999864 456788
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 999999999999999753 23478899999999999999999999 999999999999999999999999999986
Q ss_pred eccCCc---ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 448 VDVRKT---NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG-QRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 448 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
...... .......||+.|+|||.+.+..++.++||||||+++|||+|| ..||...... .... ......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-----~~~~---~~~~~~ 249 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITV---YLLQGR 249 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-----THHH---HHHTTC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-----HHHH---HHhcCC
Confidence 643321 123345578899999999999999999999999999999995 5555432211 1111 111110
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 524 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
. ...+...+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 250 ~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 289 (298)
T 3f66_A 250 R----------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289 (298)
T ss_dssp C----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 001112235789999999999999999999999999874
No 118
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=339.68 Aligned_cols=246 Identities=25% Similarity=0.297 Sum_probs=203.5
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|++.+.||+|+||.||+|... +|+.||+|++++.. .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467899999999999999999975 69999999986421 123456788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|.+++.... .++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999999999997632 388999999999999999999999 99999999999999999999999999998754
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.. .....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~------ 219 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--------KTYEKILNAE------ 219 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHCC------
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC------
Confidence 32 23457999999999999999999999999999999999999999643211 1111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
. .++...+.++.+++.+|++.||++|| +++++++
T Consensus 220 ---~--~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 220 ---L--RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---C--CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---C--CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 0 11222345789999999999999999 7777763
No 119
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.3e-40 Score=352.14 Aligned_cols=272 Identities=18% Similarity=0.200 Sum_probs=204.2
Q ss_pred HhcCCcccCccccC--CCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcce
Q 007073 292 ATDNFSEKNVLGQG--GFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 367 (619)
Q Consensus 292 ~~~~~~~~~~lg~G--~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 367 (619)
..++|++.+.||+| +||+||+|... +|+.||||++.... .....+.+.+|+.+++.++|||||++++++...+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 45679999999999 99999999976 79999999997433 2334567888999999999999999999999999999
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.+..
T Consensus 103 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99999999999999976432 3388999999999999999999999 999999999999999999999999999875
Q ss_pred eccCCc------ceeeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH
Q 007073 448 VDVRKT------NVTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL 519 (619)
Q Consensus 448 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 519 (619)
...... .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....................
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence 532211 11122468999999999987 5799999999999999999999999965332111000000000000
Q ss_pred hhh-----c-------------ccchhcc---------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 520 ERE-----K-------------RLDAIVD---------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 520 ~~~-----~-------------~~~~~~~---------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... . ....... ...........+..+.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000 0 0000000 00000112234467899999999999999999999985
No 120
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9e-41 Score=352.93 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=197.8
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHcc--CCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAV--HRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv 369 (619)
.++|.+.+.||+|+||.||+|...+|+.||||++.... .....+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 35699999999999999999998889999999986433 3345578999999999997 59999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|| +.+++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++ ++.+||+|||+++...
T Consensus 135 ~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 67889999997643 478889999999999999999999 999999999999996 5789999999998765
Q ss_pred cCCcc-eeeeccccccccccccccC-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007073 450 VRKTN-VTTQVRGTMGHIAPEYLST-----------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 450 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
..... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... .....
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-------~~~~~ 278 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKLH 278 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-------HHHHH
Confidence 43322 2334579999999999865 46899999999999999999999999642110 01111
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
. ++++.....++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 279 ~---------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 A---------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp H---------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H---------HhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1 111111111111223578899999999999999999999853
No 121
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-40 Score=341.63 Aligned_cols=272 Identities=23% Similarity=0.322 Sum_probs=204.8
Q ss_pred cCHHHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc--cCCCccceeeeee
Q 007073 284 YSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA--VHRNLLRLIGFCT 361 (619)
Q Consensus 284 ~~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~ 361 (619)
.+........++|++.+.||+|+||.||+|.+. |+.||||++.. .....+..|.+++... +||||+++++++.
T Consensus 27 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~ 101 (337)
T 3mdy_A 27 LPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFT----TEEASWFRETEIYQTVLMRHENILGFIAADI 101 (337)
T ss_dssp SCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEG----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred CCcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEec----cccchhhhHHHHHHHHhhcCCCeeeEEEEEc
Confidence 344444556788999999999999999999985 89999999853 2345556666666554 8999999999997
Q ss_pred CC----CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCcEEeC
Q 007073 362 TP----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC-----NPKIIHRDVKAANVLLD 432 (619)
Q Consensus 362 ~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp~NIll~ 432 (619)
.. ...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+++ .++|+||||||+||+++
T Consensus 102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~ 176 (337)
T 3mdy_A 102 KGTGSWTQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK 176 (337)
T ss_dssp ESCGGGCEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred cCCCCCCceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC
Confidence 76 6789999999999999999652 3889999999999999999999762 34899999999999999
Q ss_pred CCCcEEEcccccceeeccCCcce---eeeccccccccccccccCCCCCcc------hhhHHHHHHHHHHHhC--------
Q 007073 433 EDFEAVVGDFGLAKLVDVRKTNV---TTQVRGTMGHIAPEYLSTGKSSER------TDVFGYGIMLLELVTG-------- 495 (619)
Q Consensus 433 ~~~~~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~S~Gv~l~elltg-------- 495 (619)
.++.+||+|||+++......... .....||+.|+|||.+.+...+.+ +|||||||++|||+||
T Consensus 177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~ 256 (337)
T 3mdy_A 177 KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE 256 (337)
T ss_dssp TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccc
Confidence 99999999999998764433221 124469999999999987766654 9999999999999999
Q ss_pred --CCCCCCCccccccchhHHHHHHHHhhhcccchhccccccC-CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 496 --QRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK-NYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 496 --~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
+.||......... . ............ .+.... ......+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 257 ~~~~p~~~~~~~~~~---~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 257 EYQLPYHDLVPSDPS---Y-EDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp CCCCTTTTTSCSSCC---H-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cccccHhhhcCCCCc---h-hhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 5555432211111 1 111111111111 111110 0123667889999999999999999999999999987
Q ss_pred C
Q 007073 573 E 573 (619)
Q Consensus 573 ~ 573 (619)
+
T Consensus 329 l 329 (337)
T 3mdy_A 329 M 329 (337)
T ss_dssp H
T ss_pred H
Confidence 4
No 122
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-40 Score=349.34 Aligned_cols=253 Identities=20% Similarity=0.254 Sum_probs=205.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.++|.+.+.||+|+||.||+|... +|+.||+|.+.... ......+.+|+++++.++||||+++++++......++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 467999999999999999999975 68999999986432 3345678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC--CCcEEEcccccceeec
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE--DFEAVVGDFGLAKLVD 449 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~ 449 (619)
|+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++...
T Consensus 129 ~~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 129 FLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred cCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 99999999988753 23489999999999999999999999 9999999999999974 5789999999998765
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..... . ........... ..
T Consensus 203 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~---~~~~~i~~~~~---~~ 269 (387)
T 1kob_A 203 PDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-----L---ETLQNVKRCDW---EF 269 (387)
T ss_dssp TTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-----H---HHHHHHHHCCC---CC
T ss_pred CCcc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-----H---HHHHHHHhCCC---CC
Confidence 4332 3344699999999999999999999999999999999999999964321 1 11111111100 00
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
+ .......+..+.+++.+||+.||++|||+.++++.
T Consensus 270 ~----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 270 D----EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp C----SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred C----ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1 11112234678999999999999999999999863
No 123
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.7e-42 Score=351.74 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=189.7
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHH--ccCCCccceeeeeeCCC----cc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISV--AVHRNLLRLIGFCTTPT----ER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~ 366 (619)
.++|.+.+.||+|+||.||+|.+. |+.||||++.. .....+.+|.+++.. ++||||+++++++.... ..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecc----cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 367999999999999999999884 89999999853 335677888888877 78999999999998766 67
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH--------EHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
++||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+|
T Consensus 77 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred EEEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 9999999999999999653 3778889999999999999999 77 999999999999999999999
Q ss_pred EcccccceeeccCCcce---eeeccccccccccccccCC------CCCcchhhHHHHHHHHHHHhC----------CCCC
Q 007073 439 VGDFGLAKLVDVRKTNV---TTQVRGTMGHIAPEYLSTG------KSSERTDVFGYGIMLLELVTG----------QRAI 499 (619)
Q Consensus 439 l~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~S~Gv~l~elltg----------~~p~ 499 (619)
|+|||+++......... .....||+.|+|||.+.+. .++.++|||||||++|||+|| ..||
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 99999998765443321 2234699999999999776 445789999999999999999 5555
Q ss_pred CCCccccccchhHHHHHHHHhhhcccchhccccccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 500 DFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
............. ...+......... ....+..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 229 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 229 YDLVPSDPSVEEM------------RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp TTTCC-CCCCC-C------------HHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred cccCCCCccHHHH------------HHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 4321111110000 0111111112222 2356678999999999999999999999999999865
Q ss_pred cc
Q 007073 575 LA 576 (619)
Q Consensus 575 ~~ 576 (619)
..
T Consensus 297 ~~ 298 (303)
T 3gxj_A 297 QQ 298 (303)
T ss_dssp CC
T ss_pred hh
Confidence 43
No 124
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.3e-40 Score=337.75 Aligned_cols=262 Identities=20% Similarity=0.225 Sum_probs=200.0
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..++|.+.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3468999999999999999999975 689999999864322 2234778999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 112 v~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 999999999999997643 388999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
............|++.|+|||.+.+..++.++||||||+++|||+||+.||...... .............
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~-- 254 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--------VMGAHINQAIPRP-- 254 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------HHHHHHHSCCCCG--
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--------HHHHHhccCCCCc--
Confidence 544333344556899999999999999999999999999999999999999643211 0111111100000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHhcCCcc
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-AMSEVVRMLEGEGLA 576 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~~ 576 (619)
.......+..+.+++.+||+.||++|| +++++++.|+.....
T Consensus 255 ------~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 255 ------STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp ------GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred ------cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 011122335788999999999999999 999999999985433
No 125
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=350.40 Aligned_cols=260 Identities=18% Similarity=0.218 Sum_probs=202.6
Q ss_pred hcCCcccCccccCCCceEEEEEeCC---------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccc--------
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD---------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR-------- 355 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~-------- 355 (619)
.++|.+.+.||+|+||.||+|.... ++.||||++... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 3679999999999999999999763 789999998642 36789999999999999998
Q ss_pred -------eeeeeeC-CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 007073 356 -------LIGFCTT-PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAA 427 (619)
Q Consensus 356 -------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~ 427 (619)
+++++.. ....++||||+ +++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 5666665 67789999999 999999998642 23489999999999999999999999 9999999999
Q ss_pred cEEeCCCC--cEEEcccccceeeccCCcc------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCC
Q 007073 428 NVLLDEDF--EAVVGDFGLAKLVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 499 (619)
Q Consensus 428 NIll~~~~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~ 499 (619)
||+++.++ .+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||+||+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 9999999999876433221 123347999999999999999999999999999999999999999
Q ss_pred CCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 500 DFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
...... ............ .......+.... ....+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 269 ~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 333 (352)
T 2jii_A 269 TNCLPN---TEDIMKQKQKFV--DKPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA 333 (352)
T ss_dssp GGGTTC---HHHHHHHHHHHH--HSCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred ccCCcC---HHHHHHHHHhcc--CChhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence 743211 111111111111 111111111100 01123578999999999999999999999999987
No 126
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=344.35 Aligned_cols=251 Identities=23% Similarity=0.288 Sum_probs=189.3
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..++|++.+.||+|+||+||+|... +++.||||+++... ..+.+.+|++++++++||||+++++++..+...++||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 4567999999999999999999976 58899999997532 3466889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEccccccee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFGLAKL 447 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGla~~ 447 (619)
||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 128 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 128 ELVTGGELFDRIVEK----GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp CCCCSCBHHHHHTTC----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 999999999988753 3488999999999999999999999 9999999999999975 88999999999986
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
.... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ... ........ .
T Consensus 201 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~---~~~i~~~~-~-- 268 (349)
T 2w4o_A 201 VEHQ--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD----QFM---FRRILNCE-Y-- 268 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH----HHH---HHHHHTTC-C--
T ss_pred cCcc--cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc----HHH---HHHHHhCC-C--
Confidence 5432 2233456899999999999999999999999999999999999999643211 101 11111110 0
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..........+..+.+++.+||+.||++|||+.++++
T Consensus 269 ----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 269 ----YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ----CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----ccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0001111233467899999999999999999999986
No 127
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=8.6e-41 Score=347.59 Aligned_cols=246 Identities=21% Similarity=0.259 Sum_probs=203.8
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|++.+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+.+++.++||||+++++++......++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 467999999999999999999975 68999999986421 223456788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|.+++.... .++...+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceecc
Confidence 99999999999998643 388999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.. .....||+.|+|||.+.+..++.++|||||||++|||+||+.||..... .......... ..
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~-~~---- 255 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--------IQIYEKIVSG-KV---- 255 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHC-CC----
T ss_pred CC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--------HHHHHHHHcC-CC----
Confidence 32 2345699999999999999999999999999999999999999964321 1111111111 10
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPA-----MSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~ 568 (619)
.++...+..+.+++.+||+.||++||+ ++++++
T Consensus 256 ------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 ------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 112223467899999999999999998 666653
No 128
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.7e-41 Score=346.19 Aligned_cols=258 Identities=25% Similarity=0.423 Sum_probs=204.9
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcE--EEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTK--VAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~--vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 368 (619)
.++|.+.+.||+|+||.||+|... +|.. ||+|+++........+.+.+|+++++++ +||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 367889999999999999999964 5664 4999987655555667899999999999 89999999999999999999
Q ss_pred EecccccchhhhhhcccC------------CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc
Q 007073 369 VYPFMQNLSVAYRLREIK------------PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE 436 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 436 (619)
||||+++|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997643 2234589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHH
Q 007073 437 AVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDH 515 (619)
Q Consensus 437 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 515 (619)
+||+|||+++..... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ..
T Consensus 181 ~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~~ 250 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------EL 250 (327)
T ss_dssp EEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HH
T ss_pred EEEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--------HH
Confidence 999999998743221 11223456889999999998889999999999999999998 99999643211 11
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
........ ....+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 251 ~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 251 YEKLPQGY----------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp HHHGGGTC----------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhhcCC----------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11111110 1111223346789999999999999999999999999873
No 129
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.5e-40 Score=342.71 Aligned_cols=250 Identities=19% Similarity=0.269 Sum_probs=180.2
Q ss_pred cCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeEecccccc
Q 007073 299 KNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
.+.||+|+||+||+|... +|+.||||++.. .....+.+|+.+++.+. ||||+++++++......++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK----RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999975 689999999863 34567889999999997 999999999999999999999999999
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---cEEEcccccceeeccCCc
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF---EAVVGDFGLAKLVDVRKT 453 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfGla~~~~~~~~ 453 (619)
+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 92 ~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 92 ELFERIKKK----KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp BHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 999999863 3489999999999999999999999 999999999999997665 899999999986643322
Q ss_pred ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccc
Q 007073 454 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 533 (619)
Q Consensus 454 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 533 (619)
......||+.|+|||.+.+..++.++|||||||++|||+||+.||......... ....+......... .. .
T Consensus 165 -~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~i~~~~-~~------~ 235 (325)
T 3kn6_A 165 -PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKKIKKGD-FS------F 235 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHHHTTTC-CC------C
T ss_pred -cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHHHHcCC-CC------C
Confidence 233456899999999999999999999999999999999999999753321110 11111111111110 00 0
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 534 NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 534 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........+.++.+++.+||+.||++|||+.++++
T Consensus 236 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00001123467899999999999999999999874
No 130
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=9.8e-41 Score=344.42 Aligned_cols=261 Identities=27% Similarity=0.384 Sum_probs=207.2
Q ss_pred HhcCCcccCccccCCCceEEEEEe------CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
..++|.+.+.||+|+||.||+|.+ .++..||||++...........+.+|+.++++++||||+++++++.....
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 457899999999999999999984 25778999999765555667789999999999999999999999999999
Q ss_pred ceeEecccccchhhhhhcccCCC---CCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEE
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPG---EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVV 439 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl 439 (619)
.++||||+++++|.+++...... ...+++..+..++.|++.||.|||++ +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999865422 24588999999999999999999999 9999999999999984 456999
Q ss_pred cccccceeeccCCc-ceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHH
Q 007073 440 GDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 440 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
+|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||...... ....
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~ 256 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EVLE 256 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--------HHHH
Confidence 99999975533222 12234567899999999999999999999999999999999 99998643211 1111
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
....... ...+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus 257 ~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 257 FVTSGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHhcCCC----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 1111111 111222345789999999999999999999999998763
No 131
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.3e-40 Score=343.35 Aligned_cols=250 Identities=22% Similarity=0.257 Sum_probs=194.1
Q ss_pred HhcCCcccCccccCCCceEEEEEe----CCCcEEEEEEeccCC---CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFE---SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~----~~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 364 (619)
..++|++.+.||+|+||.||++.. .+|+.||+|+++... .......+.+|+.+++.++||||+++++++...+
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 356899999999999999999997 478999999997532 1223456788999999999999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||||+++|+|.+++.... .++......++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 9999999999999999997643 378889999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
++...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ......... .
T Consensus 168 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~-~ 237 (327)
T 3a62_A 168 CKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--------KTIDKILKC-K 237 (327)
T ss_dssp C-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHT-C
T ss_pred ccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhC-C
Confidence 97543222 2233456999999999999999999999999999999999999999643211 111111111 0
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
...+...+..+.+++.+||+.||++|| ++.++++
T Consensus 238 ----------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 238 ----------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ----------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 011222346789999999999999999 6667654
No 132
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.3e-41 Score=349.76 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=203.1
Q ss_pred HHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCC
Q 007073 289 LQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPT 364 (619)
Q Consensus 289 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 364 (619)
.....++|.+.+.||+|+||.||+|..+ +|+.||||+++... .......+..|..++..+ +||||+++++++.+.+
T Consensus 12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~ 91 (345)
T 1xjd_A 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 91 (345)
T ss_dssp ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence 3456788999999999999999999975 68999999996421 123456778899999876 8999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~ 164 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGM 164 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChh
Confidence 9999999999999999997643 388999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
++...... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ..........
T Consensus 165 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~- 234 (345)
T 1xjd_A 165 CKENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--------ELFHSIRMDN- 234 (345)
T ss_dssp CBCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCC-
T ss_pred hhhcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHhCC-
Confidence 98543222 2234567999999999999999999999999999999999999999643211 1111111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMS-EVV 567 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl 567 (619)
. .++...+..+.+++.+||+.||++||++. +++
T Consensus 235 ------~----~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 ------P----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ------C----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ------C----CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0 11122345788999999999999999987 443
No 133
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=336.40 Aligned_cols=263 Identities=19% Similarity=0.260 Sum_probs=198.8
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|++.+.||+|+||+||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57899999999999999999975 589999999865433 2335678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRYQ----RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 99999999887653 3388999999999999999999999 9999999999999999999999999999876533
Q ss_pred CcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH-----------H
Q 007073 452 KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK-----------L 519 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------~ 519 (619)
.. ......||+.|+|||.+.+ ..++.++||||||+++|||+||+.||........ ....... .
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 230 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ----LYLIRKTLGDLIPRHQQVF 230 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCSCCHHHHHHH
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhccccccccccc
Confidence 22 2334568999999999876 6689999999999999999999999975432111 0000000 0
Q ss_pred hhhcccchhccccccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 520 EREKRLDAIVDRNLNKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...........+...... .+..+..+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000000000000000 0123456889999999999999999999985
No 134
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.5e-41 Score=348.93 Aligned_cols=272 Identities=25% Similarity=0.314 Sum_probs=210.5
Q ss_pred hcCCcccCccccCCCceEEEEEe-----CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC--CCc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT--PTE 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~ 365 (619)
.++|++.+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 46788999999999999999984 36889999999753 34456779999999999999999999998864 455
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 789999999999999997632 2489999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc--eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 446 KLVDVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 446 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
+........ ......||..|+|||.+.+..++.++||||||+++|||+||+.||............ .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~---~~~~~~~~~ 251 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG---CERDVPALS 251 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC-------CCHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc---cccccccHH
Confidence 877543332 122345788899999999989999999999999999999999998643211000000 000000000
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 524 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
..............+...+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 252 RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred HHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 011111111112223344568899999999999999999999999999863
No 135
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.9e-40 Score=341.14 Aligned_cols=270 Identities=23% Similarity=0.319 Sum_probs=211.6
Q ss_pred ccCHHHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHH--ccCCCccceeeee
Q 007073 283 RYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISV--AVHRNLLRLIGFC 360 (619)
Q Consensus 283 ~~~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~ 360 (619)
..++.......++|.+.+.||+|+||.||+|.+ +|+.||||++.. .....+.+|.+++.. ++||||+++++++
T Consensus 31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~ 105 (342)
T 1b6c_B 31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAAD 105 (342)
T ss_dssp SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEE
T ss_pred CCceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc----hhHHHHHHHHHHHHHhhcCCCcEEEEEeee
Confidence 344445556778999999999999999999998 589999999853 345678889999887 7899999999999
Q ss_pred eCCC----cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCc
Q 007073 361 TTPT----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH--------EHCNPKIIHRDVKAAN 428 (619)
Q Consensus 361 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~N 428 (619)
.... ..++||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+|
T Consensus 106 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~N 177 (342)
T 1b6c_B 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKN 177 (342)
T ss_dssp ECCCSSCCCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGG
T ss_pred cccCCccceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHH
Confidence 8776 789999999999999999752 3889999999999999999999 77 99999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcc---eeeeccccccccccccccCCC------CCcchhhHHHHHHHHHHHhC----
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTN---VTTQVRGTMGHIAPEYLSTGK------SSERTDVFGYGIMLLELVTG---- 495 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~S~Gv~l~elltg---- 495 (619)
|+++.++.+||+|||++......... ......||+.|+|||.+.+.. ++.++||||||+++|||+||
T Consensus 178 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~ 257 (342)
T 1b6c_B 178 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257 (342)
T ss_dssp EEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred EEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcC
Confidence 99999999999999999877544332 123456899999999997652 34789999999999999999
Q ss_pred ------CCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 496 ------QRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKN-YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 496 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..||......... ...+..... ... ..+.+... ........+.+++.+||+.||++|||+.+|++
T Consensus 258 ~~~~~~~~p~~~~~~~~~~---~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 258 GIHEDYQLPYYDLVPSDPS---VEEMRKVVC-EQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329 (342)
T ss_dssp TBCCCCCCTTTTTSCSSCC---HHHHHHHHT-TSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CcccccccCccccCcCccc---HHHHHHHHH-HHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 6676543221111 111111111 111 11111110 12356678999999999999999999999999
Q ss_pred HHhcC
Q 007073 569 MLEGE 573 (619)
Q Consensus 569 ~L~~~ 573 (619)
.|+.+
T Consensus 330 ~L~~i 334 (342)
T 1b6c_B 330 TLSQL 334 (342)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99874
No 136
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.3e-41 Score=339.63 Aligned_cols=258 Identities=20% Similarity=0.275 Sum_probs=206.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeee--CCCccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCT--TPTERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~l 368 (619)
.++|++.+.||+|+||.||+|... +|+.||+|.+.... .....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467889999999999999999975 78999999997543 3345577899999999999999999999874 3567899
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCcEEeCCCCcEEEcccc
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK-----IIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
||||+++++|.+++.........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999987554455689999999999999999999999 7 9999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
+++....... ......|++.|+|||.+.+..++.++||||||+++|||+||+.||..... . ........ +
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~---~~~~~i~~-~ 231 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-----K---ELAGKIRE-G 231 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----H---HHHHHHHH-T
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-----H---HHHHHHhh-c
Confidence 9986543221 12234689999999999999999999999999999999999999864321 1 11111111 1
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 524 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
... ..+...+..+.+++.+||+.||++|||+.|+++.+..
T Consensus 232 ~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 232 KFR---------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp CCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ccc---------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 111 1122334678999999999999999999999987654
No 137
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.9e-40 Score=339.97 Aligned_cols=265 Identities=25% Similarity=0.376 Sum_probs=200.4
Q ss_pred HHHHHhcCCcccCccccCCCceEEEEEeC----CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeC
Q 007073 288 ELQLATDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT 362 (619)
Q Consensus 288 el~~~~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 362 (619)
++....++|.+.+.||+|+||.||+|... ++..||||+++... .....+.+.+|+.++++++||||+++++++..
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 44456778999999999999999999864 34589999987433 33345778999999999999999999999977
Q ss_pred CCc-----ceeEecccccchhhhhhcccC--CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 363 PTE-----RLLVYPFMQNLSVAYRLREIK--PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 363 ~~~-----~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
... .++||||+++|+|.+++.... .....+++..+..++.|+++||.|||++ +|+||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTS
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCC
Confidence 653 489999999999999985422 2345689999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCcc-eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007073 436 EAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 513 (619)
.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |..||...... ...
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~ 259 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-----EMY 259 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHH
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHH
Confidence 9999999999876433221 2233457889999999999999999999999999999999 88888643321 111
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
........ ...+...+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 260 ---~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 260 ---DYLLHGHR----------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp ---HHHHTTCC----------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHHHcCCC----------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111110 111223345789999999999999999999999999874
No 138
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1e-40 Score=341.87 Aligned_cols=257 Identities=23% Similarity=0.289 Sum_probs=195.6
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc---
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER--- 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~--- 366 (619)
.++|++.+.||+|+||.||+|.. .+|+.||||+++.... ......+.+|+.++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999996 5789999999975432 23346788999999999999999999998766544
Q ss_pred -eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 367 -LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 367 -~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
++||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 99999999999999997643 389999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc--eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 446 KLVDVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 446 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
+........ ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ..........
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~~ 235 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--------SVAYQHVRED 235 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhcCC
Confidence 876443221 223456899999999999999999999999999999999999999643321 1111111111
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH-HHHh
Q 007073 524 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV-RMLE 571 (619)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl-~~L~ 571 (619)
.... .. .....+.++.+++.+||+.||++||++.+++ +.+.
T Consensus 236 ~~~~---~~----~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 236 PIPP---SA----RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp CCCH---HH----HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CCCc---cc----ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 0000 00 0111235788999999999999999766655 4443
No 139
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.7e-40 Score=347.41 Aligned_cols=210 Identities=20% Similarity=0.263 Sum_probs=182.9
Q ss_pred ccccCHHHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-----CCCcc
Q 007073 281 LKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-----HRNLL 354 (619)
Q Consensus 281 ~~~~~~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-----H~niv 354 (619)
...+++++.+...++|.+.+.||+|+||+||+|... +++.||||+++. .......+..|+.+++.+. ||||+
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN--IKKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS--CHHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc--chhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 345666677777889999999999999999999974 689999999863 2344567788999999986 99999
Q ss_pred ceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-
Q 007073 355 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE- 433 (619)
Q Consensus 355 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 433 (619)
++++++...+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDP 173 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCT
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccc
Confidence 9999999999999999999 8999999976432 3488999999999999999999999 9999999999999975
Q ss_pred ------------------------CCcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHH
Q 007073 434 ------------------------DFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIML 489 (619)
Q Consensus 434 ------------------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l 489 (619)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence 789999999999864432 2345689999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC
Q 007073 490 LELVTGQRAIDFS 502 (619)
Q Consensus 490 ~elltg~~p~~~~ 502 (619)
|||+||+.||...
T Consensus 250 ~ell~g~~pf~~~ 262 (360)
T 3llt_A 250 AELYTGSLLFRTH 262 (360)
T ss_dssp HHHHHSSCSCCCS
T ss_pred HHHHHCCCCCCCC
Confidence 9999999999753
No 140
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.9e-40 Score=336.02 Aligned_cols=250 Identities=24% Similarity=0.338 Sum_probs=207.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
.+.|...+.||+|+||.||+|... +|+.||||++.........+.+.+|+.+++.++||||+++++++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 456888999999999999999964 6899999999765555667889999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 101 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 9999999999864 2488999999999999999999999 9999999999999999999999999999876543
Q ss_pred CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccc
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 531 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (619)
.. ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ........ ... +
T Consensus 173 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~-----~ 237 (303)
T 3a7i_A 173 QI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--------KVLFLIPK-NNP-----P 237 (303)
T ss_dssp BC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHH-SCC-----C
T ss_pred cc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--------HHHHHhhc-CCC-----C
Confidence 22 223456899999999999999999999999999999999999998643211 11111111 100 1
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 532 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 532 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
......+..+.+++.+||+.||++|||+.++++.
T Consensus 238 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 238 ----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ----CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ----CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1112223578999999999999999999999863
No 141
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.9e-40 Score=328.95 Aligned_cols=246 Identities=21% Similarity=0.321 Sum_probs=179.8
Q ss_pred cCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
++|++.+.||+|+||.||+|.. .+|+.||+|++.... .....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999996 478999999987532 2334668899999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+ ++++.+.+... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 56777777643 3389999999999999999999999 999999999999999999999999999986543
Q ss_pred CCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.. ......||+.|+|||.+.+..+ +.++||||||+++|||+||+.||...... ......... ..
T Consensus 165 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~-~~---- 229 (275)
T 2eue_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFKNISNG-VY---- 229 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHT-CC----
T ss_pred cc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhC-CC----
Confidence 32 2234468999999999987765 78999999999999999999999643211 111111111 00
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+...+..+.+++.+||+.||++|||+.|+++
T Consensus 230 ------~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 230 ------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ------CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 111223457889999999999999999999974
No 142
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.4e-39 Score=328.60 Aligned_cols=252 Identities=21% Similarity=0.269 Sum_probs=204.3
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
.++|++.+.||+|+||.||+|... +|+.||+|++.... .....+.+.+|++++++++||||+++++++..+...++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999975 68999999986433 3344577889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEccccccee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKL 447 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGla~~ 447 (619)
||+++++|.+.+.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999988887643 388999999999999999999999 9999999999999986655 99999999987
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
..... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... .......... ..
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~-~~- 225 (284)
T 3kk8_A 158 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQIKAGA-YD- 225 (284)
T ss_dssp CCSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTC-CC-
T ss_pred cccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--------HHHHHHHhcc-cc-
Confidence 65332 233456999999999999999999999999999999999999999643211 1111111110 00
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ........+..+.+++.+|++.||++|||+.|+++
T Consensus 226 ~-----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 226 Y-----PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp C-----CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C-----CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 00011123357889999999999999999999985
No 143
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.3e-39 Score=335.10 Aligned_cols=252 Identities=20% Similarity=0.247 Sum_probs=205.3
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc-----chHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-----GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
.++|.+.+.||+|+||.||+|... +|+.||||.+...... ...+.+.+|+.++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467899999999999999999975 6899999998753322 2467899999999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEccc
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF----EAVVGDF 442 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 442 (619)
++||||+++++|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC----SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 9999999999999999753 3489999999999999999999999 999999999999999887 7999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
|++....... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... +........
T Consensus 164 g~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~ 233 (321)
T 2a2a_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITSV 233 (321)
T ss_dssp TTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTT
T ss_pred ccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhc
Confidence 9998765432 223456899999999999999999999999999999999999999643211 111111110
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ...+... ...+..+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~---~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 234 SY---DFDEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CC---CCCHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred cc---ccChhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 0000000 112357889999999999999999999986
No 144
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.8e-40 Score=336.06 Aligned_cols=253 Identities=23% Similarity=0.345 Sum_probs=201.9
Q ss_pred hcCCcccCccccCCCceEEEEEeCC-C-------cEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLAD-G-------TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~-g-------~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 364 (619)
.++|.+.+.||+|+||+||+|.... + ..||+|++... .....+.+.+|+.++++++||||+++++++..++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA-HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG-GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 4678889999999999999999652 3 57999998643 3445678999999999999999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--------
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-------- 436 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-------- 436 (619)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 999999999999999999763 23388999999999999999999999 9999999999999998877
Q ss_pred EEEcccccceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007073 437 AVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 515 (619)
Q Consensus 437 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 515 (619)
+||+|||++..... .....||+.|+|||.+.+ ..++.++||||||+++|||+||..|+...... . ..
T Consensus 160 ~kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~----~---~~ 227 (289)
T 4fvq_A 160 IKLSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS----Q---RK 227 (289)
T ss_dssp EEECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH----H---HH
T ss_pred eeeccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch----H---HH
Confidence 99999999864422 123458899999999987 67899999999999999999965554322110 0 11
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcc
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLA 576 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 576 (619)
.......... +...+..+.+++.+||+.||++|||+.++++.|+++.-.
T Consensus 228 ~~~~~~~~~~------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 228 LQFYEDRHQL------------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp HHHHHTTCCC------------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred HHHhhccCCC------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1111111111 111124678999999999999999999999999986443
No 145
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=343.91 Aligned_cols=244 Identities=21% Similarity=0.256 Sum_probs=202.1
Q ss_pred HhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCc-------chHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESP-------GGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
..++|.+.+.||+|+||+||+|.. .+|+.||||++...... .....+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356799999999999999999996 47899999998754311 1234677899999999999999999999999
Q ss_pred CcceeEecccccc-hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 364 TERLLVYPFMQNL-SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 364 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 9999887532 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
|+++....... .....||+.|+|||.+.+..+ +.++|||||||++|||+||+.||......
T Consensus 175 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------- 236 (335)
T 3dls_A 175 GSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------- 236 (335)
T ss_dssp TTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------
T ss_pred ccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------
Confidence 99987654332 334569999999999988877 88999999999999999999999632110
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
...... .+...+..+.+++.+||+.||++|||+.++++.
T Consensus 237 ---~~~~~~------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ---VEAAIH------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---TTTCCC------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---HhhccC------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 011123578999999999999999999999874
No 146
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.2e-41 Score=345.82 Aligned_cols=268 Identities=26% Similarity=0.371 Sum_probs=198.3
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHH--HHccCCCccceeeeeeC-----CC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMI--SVAVHRNLLRLIGFCTT-----PT 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l--~~l~H~niv~l~~~~~~-----~~ 364 (619)
..++|.+.+.||+|+||+||+|.. +++.||||++.. .....+..|.++. ..++||||+++++++.. ..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSF----ANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEG----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeec----cchhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 457899999999999999999987 689999999863 2344555555554 45899999999985532 23
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCcEEeCCCCcEE
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC------NPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
..++||||+++|+|.+++.... .++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred eEEEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 4689999999999999997532 478889999999999999999873 33899999999999999999999
Q ss_pred EcccccceeeccCCc-------ceeeeccccccccccccccC-------CCCCcchhhHHHHHHHHHHHhCCCCCCCCcc
Q 007073 439 VGDFGLAKLVDVRKT-------NVTTQVRGTMGHIAPEYLST-------GKSSERTDVFGYGIMLLELVTGQRAIDFSRL 504 (619)
Q Consensus 439 l~DfGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~ 504 (619)
|+|||+++.+..... .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.|+.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 999999987653221 12224469999999999976 3567899999999999999999877644322
Q ss_pred ccccchhHHH---------HHHHHhhhcccchhccccccC--CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 505 EEEDDVLLLD---------HVKKLEREKRLDAIVDRNLNK--NYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 505 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.......... ........... .+.+.. ......+..+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 2111111110 00111000000 011111 11234667899999999999999999999999999884
No 147
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.7e-40 Score=345.24 Aligned_cols=248 Identities=27% Similarity=0.358 Sum_probs=199.4
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.+.|...+.||+|+||+||+|.. .+|+.||||++..... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34588899999999999999996 5789999999864322 22346789999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+. |++.+.+.... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 133 ~e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 99998 57777775432 3489999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCcceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
.. ....||+.|+|||.+. ...++.++|||||||++|||+||+.||...... ...........
T Consensus 206 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--------~~~~~~~~~~~-- 270 (348)
T 1u5q_A 206 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNES-- 270 (348)
T ss_dssp SB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSCC--
T ss_pred CC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHhcCC--
Confidence 32 2356999999999984 567899999999999999999999998643211 11111111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
+.. .....+..+.+++.+||+.||++|||+.++++.
T Consensus 271 ----~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 271 ----PAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ----CCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ----CCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 111223578899999999999999999999853
No 148
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=8.1e-40 Score=342.92 Aligned_cols=254 Identities=17% Similarity=0.164 Sum_probs=206.2
Q ss_pred HHHhcCCcccCccccCCCceEEEEE------eCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc---CCCccceeeee
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGV------LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV---HRNLLRLIGFC 360 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~ 360 (619)
+...++|.+.+.||+|+||+||+|. ..+++.||||++.. ....++..|+++++.++ |+||+++++++
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP----ANPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS----CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC----CChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 3456789999999999999999994 44689999999864 23567888999888887 99999999999
Q ss_pred eCCCcceeEecccccchhhhhhcccCC-CCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC------
Q 007073 361 TTPTERLLVYPFMQNLSVAYRLREIKP-GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE------ 433 (619)
Q Consensus 361 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~------ 433 (619)
...+..++||||+++|+|.+++..... ....+++..+..++.|+++||+|||++ +|+||||||+|||++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcc
Confidence 999999999999999999999975432 245599999999999999999999999 9999999999999998
Q ss_pred -----CCcEEEcccccceeeccC-CcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccc
Q 007073 434 -----DFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE 507 (619)
Q Consensus 434 -----~~~~kl~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~ 507 (619)
++.+||+|||+|+.+... .........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~- 292 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE- 292 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-
Confidence 899999999999876422 2334455679999999999999999999999999999999999999985321100
Q ss_pred cchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHHhcC
Q 007073 508 DDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDR-PAMSEVVRMLEGE 573 (619)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~~ 573 (619)
... ...+..... ...+.+++..|++.+|.+| |+++++.+.|++.
T Consensus 293 ---------------~~~----~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 293 ---------------CKP----EGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp ---------------EEE----CSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ---------------eee----chhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 001 111111111 3466788889999999998 6788888888774
No 149
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.9e-40 Score=334.21 Aligned_cols=248 Identities=25% Similarity=0.401 Sum_probs=201.1
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..++|++.+.||+|+||+||+|... ++..||||++.... .......+.+|+.++++++||||+++++++......++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 4578999999999999999999975 57799999985421 12235678899999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.+.+.... .++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999997643 388999999999999999999999 9999999999999999999999999998654
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ..........
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~----- 223 (279)
T 3fdn_A 160 PSS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKRISRVE----- 223 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTC-----
T ss_pred Ccc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--------HHHHHHHhCC-----
Confidence 322 223456899999999999999999999999999999999999999643211 1111111100
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+...+..+.+++.+||+.||++|||+.|+++
T Consensus 224 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 224 ------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp ------CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ------CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0112223357889999999999999999999986
No 150
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.7e-40 Score=345.53 Aligned_cols=246 Identities=22% Similarity=0.272 Sum_probs=200.2
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcc
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 366 (619)
...++|++.+.||+|+||.||+|... +|+.||||+++... .....+.+..|..++..+ +||||+++++++...+..
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 35578999999999999999999986 47899999986421 123456788999999887 799999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 99999999999999997643 388999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
..... ........||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+...
T Consensus 170 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~---- 236 (353)
T 2i0e_A 170 ENIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEH---- 236 (353)
T ss_dssp CCCCT-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC----
T ss_pred ccccC-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhC----
Confidence 54322 22234567999999999999999999999999999999999999999643211 111111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
.. .++...+.++.+++.+|++.||++||++
T Consensus 237 -----~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 237 -----NV--AYPKSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp -----CC--CCCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred -----CC--CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00 1122334678999999999999999964
No 151
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.3e-40 Score=355.81 Aligned_cols=248 Identities=25% Similarity=0.367 Sum_probs=204.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|.+.+.||+|+||.||+|.+. +|+.||||++.... .......+.+|+.+++.++||||+++++++..++..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357888999999999999999975 79999999986421 123356789999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~E~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 95 MEYVSGGELFDYICKN----GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EECCSSEEHHHHTTSS----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 9999999999998753 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
... ......||+.|+|||.+.+..+ +.++||||+||++|||+||+.||+..... .........
T Consensus 168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--------~~~~~i~~~------ 231 (476)
T 2y94_A 168 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--------TLFKKICDG------ 231 (476)
T ss_dssp TTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--------HHHHHHHTT------
T ss_pred ccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcC------
Confidence 432 2334579999999999988776 78999999999999999999999743221 111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ..+...+..+.+++.+||+.||++|||+.++++
T Consensus 232 ---~~--~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 232 ---IF--YTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ---CC--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---Cc--CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 00 011122357889999999999999999999986
No 152
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-41 Score=348.46 Aligned_cols=255 Identities=21% Similarity=0.267 Sum_probs=203.6
Q ss_pred hcCCcccCccccCCCceEEEEEe----CCCcEEEEEEeccCC---CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCC
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFE---SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPT 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~----~~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 364 (619)
.++|++.+.||+|+||.||+|.. .+|+.||||+++... .....+.+.+|+++++++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46799999999999999999997 378999999986432 122345677899999999 5999999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||||+++|+|.+++.... .+++..+..++.|+++||.|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 9999999999999999997643 388999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
++..............||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ...........
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~----~~~~~~~~~~~ 281 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS----QAEISRRILKS 281 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC----HHHHHHHHHHC
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch----HHHHHHHHhcc
Confidence 98765444444445679999999999986 3478999999999999999999999974332211 11111111110
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVRM 569 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 569 (619)
. ..++...+..+.+++.+||+.||++|| ++.++++.
T Consensus 282 -------~----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 282 -------E----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp -------C----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred -------C----CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 0 112223345788999999999999999 88888754
No 153
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4e-40 Score=359.15 Aligned_cols=254 Identities=26% Similarity=0.330 Sum_probs=206.9
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..++|...++||+|+||.||+|... +|+.||+|++.+.. .......+.+|+.++++++||||+++++++......++
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 3467899999999999999999975 69999999986421 12345678899999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9999999999999987654455699999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
..... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........ ........... .
T Consensus 340 ~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~----~~~~~~~i~~~-~---- 409 (543)
T 3c4z_A 340 KAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQRVLEQ-A---- 409 (543)
T ss_dssp CTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC----HHHHHHHHHHC-C----
T ss_pred cCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh----HHHHHHHHhhc-c----
Confidence 54322 23345799999999999999999999999999999999999999975322111 11111111110 0
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMS 564 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 564 (619)
..++...+..+.+++.+||+.||++||++.
T Consensus 410 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 410 ------VTYPDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred ------cCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 011223346789999999999999999763
No 154
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.1e-40 Score=334.93 Aligned_cols=247 Identities=21% Similarity=0.309 Sum_probs=200.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|++.+.||+|+||+||+|... +++.||||++.... .......+.+|+..+..+ +||||+++++++..++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467999999999999999999976 79999999987543 334567788999999999 899999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC----------------
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---------------- 433 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---------------- 433 (619)
|||+++++|.+++.........+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999986543334589999999999999999999999 9999999999999984
Q ss_pred ---CCcEEEcccccceeeccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc
Q 007073 434 ---DFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD 509 (619)
Q Consensus 434 ---~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~ 509 (619)
...+||+|||.+....... ...||+.|+|||.+.+. .++.++||||||+++|||++|..++....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 4479999999998765332 23589999999999776 56789999999999999999987753211
Q ss_pred hhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 510 VLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
....... .... ..+...+..+.+++.+||+.||++|||+.++++
T Consensus 236 -----~~~~~~~-~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 -----QWHEIRQ-GRLP---------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp -----HHHHHHT-TCCC---------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----HHHHHHc-CCCC---------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 0011111 1111 112223457899999999999999999999875
No 155
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=332.01 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=183.7
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|.+.+.||+|+||.||+|.. .+|+.||||.+.... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35788999999999999999997 479999999986321 122346789999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 9999999999998753 23489999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||......... ..+.
T Consensus 164 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----------------~~~~ 225 (278)
T 3cok_A 164 MPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-----------------NKVV 225 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CC
T ss_pred CCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH-----------------HHHh
Confidence 3322 223356899999999999989999999999999999999999999753321110 0000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... ..+...+.++.+++.+||+.||++|||+.++++
T Consensus 226 ~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 226 LADY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SSCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hccc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0000 111223457889999999999999999999885
No 156
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=9.1e-40 Score=337.78 Aligned_cols=264 Identities=21% Similarity=0.342 Sum_probs=199.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
.++|++.+.||+|+||.||+|... +|+.||||++..... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357888999999999999999975 589999999865432 233566789999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 e~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHHST----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 999999998876542 2389999999999999999999999 999999999999999999999999999986643
Q ss_pred CCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH-----------
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK----------- 518 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~----------- 518 (619)
... ......||+.|+|||.+.+. .++.++|||||||++|||+||+.||....... ........
T Consensus 177 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 177 PGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID----QLYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCCHHHHHH
T ss_pred Ccc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH----HHHHHHHHhCCCChhhhhH
Confidence 322 23345689999999999775 78999999999999999999999997543211 11111100
Q ss_pred HhhhcccchhccccccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 519 LEREKRLDAIVDRNLNKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 519 ~~~~~~~~~~~~~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
............+...... .+..+..+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000111111111111 1123467899999999999999999999885
No 157
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.9e-40 Score=334.08 Aligned_cols=251 Identities=27% Similarity=0.381 Sum_probs=198.4
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC-CcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-TERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lv~ 370 (619)
..++|++.+.||+|+||+||+|.+. |+.||||.++.. ...+.+.+|++++++++||||+++++++... +..++||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 4578999999999999999999984 899999998643 3457889999999999999999999987654 4789999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred ecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 9999999999997532 12378888999999999999999999 999999999999999999999999999975533
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
. .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... . .......
T Consensus 170 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-----~---~~~~~~~------- 230 (278)
T 1byg_A 170 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----V---VPRVEKG------- 230 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-----H---HHHHTTT-------
T ss_pred c----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-----H---HHHHhcC-------
Confidence 2 123357889999999999999999999999999999999 999986433211 1 1111111
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.....+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 231 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i 271 (278)
T 1byg_A 231 ---YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271 (278)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence 01112223346789999999999999999999999999874
No 158
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.1e-40 Score=370.39 Aligned_cols=247 Identities=25% Similarity=0.363 Sum_probs=197.8
Q ss_pred CccccCCCceEEEEEeC---CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccccc
Q 007073 300 NVLGQGGFGKVYRGVLA---DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
+.||+|+||+||+|.+. .++.||||+++... .....+.|.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 46789999997532 33456789999999999999999999999964 458899999999
Q ss_pred chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc-
Q 007073 376 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN- 454 (619)
Q Consensus 376 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~- 454 (619)
|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 454 g~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 9999999753 3488999999999999999999999 9999999999999999999999999999876543321
Q ss_pred -eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcccchhcccc
Q 007073 455 -VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 532 (619)
Q Consensus 455 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (619)
......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... +..........
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~~i~~~~~-------- 590 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGER-------- 590 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC--------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC--------
Confidence 2233456789999999999999999999999999999999 99999643221 11111111111
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007073 533 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 572 (619)
Q Consensus 533 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 572 (619)
...+...+.++.+++..||+.||++||++.+|++.|++
T Consensus 591 --~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 591 --MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 11222344688999999999999999999999999986
No 159
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.2e-40 Score=348.44 Aligned_cols=268 Identities=22% Similarity=0.269 Sum_probs=205.6
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..++|++.+.||+|+||+||+|.+. +|+.||+|++.........+.+.+|+.++++++||||+++++++..++..++||
T Consensus 31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 3567999999999999999999975 689999999976555556678999999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.... .+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 111 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred ECCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999997643 3889999999999999999999831 799999999999999999999999999975532
Q ss_pred CCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH--------------
Q 007073 451 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV-------------- 516 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~-------------- 516 (619)
. ......||+.|+|||.+.+..++.++|||||||++|||+||+.||.................
T Consensus 185 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 185 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp H---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred c---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 2 22345689999999999999999999999999999999999999975332110000000000
Q ss_pred -------HHHhhhc----ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 517 -------KKLEREK----RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 517 -------~~~~~~~----~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
....... ....+.............+..+.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000 000000000001111223457899999999999999999999985
No 160
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-39 Score=343.49 Aligned_cols=202 Identities=25% Similarity=0.400 Sum_probs=163.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCC--cc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPT--ER 366 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~ 366 (619)
..++|++.+.||+|+||.||+|.+. +|+.||||++.... .......+.+|+.+++.+. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999964 78999999986432 3344567889999999997 999999999997554 67
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||++ ++|...+... .++...+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 87 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 99999998 5888888752 488899999999999999999999 99999999999999999999999999998
Q ss_pred eeccC--------------------CcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 447 LVDVR--------------------KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 447 ~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
..... .....+...||+.|+|||++.+ ..++.++||||+||++|||+||+.||...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 75321 1112334579999999999976 67899999999999999999999999754
No 161
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-40 Score=335.92 Aligned_cols=266 Identities=23% Similarity=0.300 Sum_probs=198.5
Q ss_pred HHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC----CcchHHHHHHHHHHHHHcc---CCCccceeeeeeC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE----SPGGDAAFQREVEMISVAV---HRNLLRLIGFCTT 362 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~ 362 (619)
...++|++.+.||+|+||+||+|.. .+|+.||||++.... .......+.+|++++++++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 4567899999999999999999996 478999999986322 1122356677888877665 9999999999976
Q ss_pred CC-----cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 007073 363 PT-----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEA 437 (619)
Q Consensus 363 ~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 437 (619)
.. ..++||||+. ++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 55 4789999997 599998876432 3389999999999999999999999 99999999999999999999
Q ss_pred EEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007073 438 VVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 438 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
||+|||+++..... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||....... .......
T Consensus 160 kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i~~ 233 (308)
T 3g33_A 160 KLADFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD----QLGKIFD 233 (308)
T ss_dssp EECSCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH----HHHHHHH
T ss_pred EEeeCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHH
Confidence 99999999865432 22345578999999999999999999999999999999999999996533211 1111111
Q ss_pred HHhhhc--ccch---hccccccC-------CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 518 KLEREK--RLDA---IVDRNLNK-------NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 518 ~~~~~~--~~~~---~~~~~l~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...... .... ........ ...+.....+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 110000 0000 00000000 001123467889999999999999999999885
No 162
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=342.09 Aligned_cols=247 Identities=20% Similarity=0.231 Sum_probs=195.1
Q ss_pred ccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecccccc
Q 007073 298 EKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 376 (619)
..+.||+|+||.||+|... +|+.||+|+++... ....+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3568999999999999964 68999999986532 345678999999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe--CCCCcEEEcccccceeeccCCcc
Q 007073 377 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL--DEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 377 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 172 ~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~- 244 (373)
T 2x4f_A 172 ELFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK- 244 (373)
T ss_dssp EEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-
T ss_pred cHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-
Confidence 999888652 23488999999999999999999999 99999999999999 6778999999999987654322
Q ss_pred eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcccccc
Q 007073 455 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLN 534 (619)
Q Consensus 455 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 534 (619)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||...... ........... .....
T Consensus 245 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~~--~~~~~--- 310 (373)
T 2x4f_A 245 -LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--------ETLNNILACRW--DLEDE--- 310 (373)
T ss_dssp -CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCC--CSCSG---
T ss_pred -cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhccC--CCChh---
Confidence 23346999999999999889999999999999999999999999643211 11111111110 00000
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 535 KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 535 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.....+..+.+++.+|++.||++|||+.|+++
T Consensus 311 --~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 311 --EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp --GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 01122357899999999999999999999986
No 163
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.3e-40 Score=348.76 Aligned_cols=258 Identities=21% Similarity=0.233 Sum_probs=199.4
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHH-HHHccCCCccceeeeeeCCCccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEM-ISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
.++|++.+.||+|+||.||+|+.+ +++.||||++++.. .......+..|..+ ++.++||||+++++++...+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999975 58899999996532 22334556677776 567899999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.+++.... .++......++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999999999997643 378889999999999999999999 9999999999999999999999999999853
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... +........
T Consensus 190 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~------ 254 (373)
T 2r5t_A 190 IEH-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILNK------ 254 (373)
T ss_dssp BCC-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--------HHHHHHHHS------
T ss_pred ccC-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhc------
Confidence 322 22334567999999999999999999999999999999999999999643211 111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCccc
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAE 577 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 577 (619)
.+ .++...+..+.+++.+|++.||++||++.+.++.+....+..
T Consensus 255 ---~~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~ 298 (373)
T 2r5t_A 255 ---PL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFS 298 (373)
T ss_dssp ---CC--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGT
T ss_pred ---cc--CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcccc
Confidence 00 111223357889999999999999999977666666655543
No 164
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3e-40 Score=355.57 Aligned_cols=250 Identities=21% Similarity=0.249 Sum_probs=194.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccC--CCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..++|++.+.||+|+||.||+|... +|+.||||++... ........+.+|+.+++.++||||+++++++...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 4467999999999999999999964 6899999998642 233345677889999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+ + +|+||||||+|||++.++.+||+|||+++.
T Consensus 226 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 999999999999987643 38999999999999999999998 7 999999999999999999999999999975
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
.... ........||+.|+|||++.+..++.++|||||||++|||+||+.||...... ......... ..
T Consensus 299 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~-~~-- 366 (446)
T 4ejn_A 299 GIKD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILME-EI-- 366 (446)
T ss_dssp TCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-CC--
T ss_pred ccCC-CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHHhC-CC--
Confidence 4322 22234567999999999999999999999999999999999999999643211 111111111 00
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
.++...+..+.+++.+||+.||++|| +++|+++
T Consensus 367 --------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 --------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11222346789999999999999999 9988874
No 165
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.7e-40 Score=358.79 Aligned_cols=255 Identities=23% Similarity=0.311 Sum_probs=207.1
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..++|...+.||+|+||.||+|... +|+.||||++.... .......+.+|+++++.++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 4567999999999999999999975 79999999986421 22345678899999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 262 VmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999999987643 23489999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchh
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 528 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (619)
.... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........ .......... .
T Consensus 337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~----~~~i~~~i~~-~----- 404 (576)
T 2acx_A 337 PEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVERLVKE-V----- 404 (576)
T ss_dssp CTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC----HHHHHHHHHH-C-----
T ss_pred ccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh----HHHHHHHhhc-c-----
Confidence 5432 23345799999999999998999999999999999999999999975332111 0111111110 0
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007073 529 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 568 (619)
Q Consensus 529 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 568 (619)
...++...+.++.+++.+||+.||++|| ++.|+++
T Consensus 405 -----~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 405 -----PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -----cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 0111223346789999999999999999 6777764
No 166
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.7e-40 Score=333.60 Aligned_cols=248 Identities=24% Similarity=0.373 Sum_probs=202.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC--------
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT-------- 362 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-------- 362 (619)
..++|++.+.||+|+||.||+|.+. +|+.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 3467899999999999999999986 79999999986432 356789999999999999999998854
Q ss_pred --------CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC
Q 007073 363 --------PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED 434 (619)
Q Consensus 363 --------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 434 (619)
....++||||+++|+|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 344789999999999999997542 23488999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007073 435 FEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 435 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 514 (619)
+.+||+|||++....... ......||+.|+|||.+.+..++.++||||||+++|||+||..|+... ..
T Consensus 159 ~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~ 226 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SK 226 (284)
T ss_dssp TEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HH
T ss_pred CCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HH
Confidence 999999999998765432 223446899999999999999999999999999999999999886310 01
Q ss_pred HHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 515 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
...... ...... ..+..+.+++.+||+.||++|||+.|+++.|+...
T Consensus 227 ~~~~~~---------~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 227 FFTDLR---------DGIISD----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp HHHHHH---------TTCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred HHHHhh---------cccccc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 111111 111111 12346789999999999999999999999998743
No 167
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=337.85 Aligned_cols=266 Identities=23% Similarity=0.351 Sum_probs=208.2
Q ss_pred HhcCCcccCccccCCCceEEEEEe-----CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCC--
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-- 364 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-- 364 (619)
..++|++.+.||+|+||.||+|.+ .+|+.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC-CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 456788999999999999999984 36899999999753 3455678999999999999999999999986654
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 6789999999999999997642 3488999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcce--eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccc-------ccchhHHHH
Q 007073 445 AKLVDVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEE-------EDDVLLLDH 515 (619)
Q Consensus 445 a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~-------~~~~~~~~~ 515 (619)
++......... .....++..|+|||.+.+..++.++||||||+++|||+||..|+.....+. .........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 98775443321 223456778999999998889999999999999999999999875321100 000000000
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.. ..+........+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 272 ~~---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 272 LI---------ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320 (326)
T ss_dssp HH---------HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HH---------HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00 11111111112233446789999999999999999999999999874
No 168
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.6e-39 Score=344.44 Aligned_cols=252 Identities=21% Similarity=0.255 Sum_probs=190.8
Q ss_pred cCCccc-CccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHH-HccCCCccceeeeeeC----CCcc
Q 007073 294 DNFSEK-NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMIS-VAVHRNLLRLIGFCTT----PTER 366 (619)
Q Consensus 294 ~~~~~~-~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~----~~~~ 366 (619)
++|.+. ++||+|+||+||+|... +|+.||||++.. ...+.+|++++. ..+||||+++++++.. ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 456555 68999999999999975 689999999863 245678888874 5589999999998865 4568
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEcccc
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFG 443 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG 443 (619)
++||||+++|+|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+|||++. ++.+||+|||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 89999999999999997632 24589999999999999999999999 9999999999999997 7899999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
+++...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........... ....+. . +
T Consensus 210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~i~---~-~ 282 (400)
T 1nxk_A 210 FAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-MKTRIR---M-G 282 (400)
T ss_dssp TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS-HHHHHH---H-T
T ss_pred cccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH-HHHHHH---c-C
Confidence 998654322 23345789999999999999999999999999999999999999975432211110 111111 0 0
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 524 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
... .........+.++.+++.+||+.||++|||+.|+++.
T Consensus 283 ~~~------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 283 QYE------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CCC------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 0000012234678999999999999999999999863
No 169
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=9.1e-40 Score=328.80 Aligned_cols=247 Identities=20% Similarity=0.280 Sum_probs=202.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..++|.+.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 3467899999999999999999975 57799999986533 234678999999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEccccccee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKL 447 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~ 447 (619)
||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++..
T Consensus 86 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 86 ELCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp ECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred eccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 9999999999887633 388999999999999999999999 99999999999999 7889999999999987
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
..... ......||+.|+|||.+.+ .++.++||||||+++|||+||+.||...... ......... ..
T Consensus 159 ~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~-~~-- 224 (277)
T 3f3z_A 159 FKPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLKIREG-TF-- 224 (277)
T ss_dssp CCTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-CC--
T ss_pred ccCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhC-CC--
Confidence 65432 2334568999999999865 4999999999999999999999999643211 111111111 00
Q ss_pred hccccccCCCCH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 IVDRNLNKNYNI----QEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+. ..+..+.+++.+|++.||++|||+.++++
T Consensus 225 --------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 225 --------TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp --------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --------CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011 12357899999999999999999999874
No 170
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.7e-40 Score=334.92 Aligned_cols=260 Identities=29% Similarity=0.382 Sum_probs=198.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeC--CCc--EEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA--DGT--KVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~--~g~--~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
..++|++.+.||+|+||+||+|.+. +++ .||||+++... .....+.+.+|++++++++||||+++++++..+.
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 3467899999999999999999863 333 68999886432 2345678999999999999999999999997765
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++|+||+++++|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred ceeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccc
Confidence 889999999999999997632 3488999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcce--eeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 446 KLVDVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 446 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
.......... .....+|..|+|||.+.+..++.++||||||+++|||+| |+.||...... +........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~ 240 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--------QILHKIDKE 240 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTS
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--------HHHHHHHcc
Confidence 8775433321 223457889999999998889999999999999999999 99998643211 111111111
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGL 575 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 575 (619)
.. ........+..+.+++.+||+.||++|||+.++++.|++...
T Consensus 241 ~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 241 GE---------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CC---------CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 10 011122334678999999999999999999999999987543
No 171
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.6e-40 Score=337.55 Aligned_cols=256 Identities=20% Similarity=0.258 Sum_probs=195.9
Q ss_pred cCCccc-CccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEe
Q 007073 294 DNFSEK-NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 294 ~~~~~~-~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 370 (619)
+.|.+. +.||+|+||+||+|... +|+.||||++.... ......+.+|++++.++ +||||+++++++...+..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 567774 78999999999999964 78999999996532 34567889999999884 7999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEccccccee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKL 447 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGla~~ 447 (619)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++..
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 9999999999997643 388999999999999999999999 9999999999999998766 99999999976
Q ss_pred eccCCc------ceeeeccccccccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch------
Q 007073 448 VDVRKT------NVTTQVRGTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV------ 510 (619)
Q Consensus 448 ~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~------ 510 (619)
...... .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 532211 11223458999999999875 5588999999999999999999999975432110000
Q ss_pred -hHHHHHHHHhhhcccchhccccccCCCCH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 511 -LLLDHVKKLEREKRLDAIVDRNLNKNYNI----QEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 511 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........... ... .++. ..+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~i~~-~~~----------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 244 ACQNMLFESIQE-GKY----------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHH-CCC----------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHhc-cCc----------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00001111111 000 0111 12357899999999999999999999986
No 172
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=341.27 Aligned_cols=262 Identities=22% Similarity=0.328 Sum_probs=194.2
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEecc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 372 (619)
++|.+.+.||+|+||+||+|... +|+.||||++...........+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999975 78999999986433332233456799999999999999999999999999999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 452 (619)
++ |+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 98 5888887753 23488999999999999999999999 99999999999999999999999999998654322
Q ss_pred cceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh---cccchh
Q 007073 453 TNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE---KRLDAI 528 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 528 (619)
.......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... ....+...... ......
T Consensus 155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~ 228 (324)
T 3mtl_A 155 -KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-----QLHFIFRILGTPTEETWPGI 228 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHCCCCTTTSTTG
T ss_pred -cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHHHhCCCChHhchhh
Confidence 22334468999999999876 568999999999999999999999997543211 11111111100 000000
Q ss_pred ccc---------cccCC----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 VDR---------NLNKN----YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 ~~~---------~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... ..... ..+....++.+++.+|++.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000 00000 01123357889999999999999999999985
No 173
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.5e-39 Score=349.25 Aligned_cols=260 Identities=20% Similarity=0.234 Sum_probs=194.0
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC------
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT------ 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 364 (619)
.++|++.+.||+|+||+||+|... +|+.||||++.... .....+.+.+|+.+++.++||||+++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999965 68999999996432 3344677889999999999999999999996553
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||||++++ +...+.. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCCC-HHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 469999999875 4444432 278899999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE-- 522 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 522 (619)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .+.........+
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~----~~~~i~~~lg~p~~ 284 (464)
T 3ttj_A 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID----QWNKVIEQLGTPCP 284 (464)
T ss_dssp C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCSCCH
T ss_pred eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCCH
Confidence 9866432 22345679999999999999999999999999999999999999997533211 111111110000
Q ss_pred c-------cc---------------chhccccccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 K-------RL---------------DAIVDRNLNKNY---NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 ~-------~~---------------~~~~~~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. .. .......+.... ......++.+|+.+||+.||++|||++|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00 000000000000 1122567899999999999999999999985
No 174
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3e-40 Score=334.40 Aligned_cols=256 Identities=19% Similarity=0.243 Sum_probs=188.8
Q ss_pred HhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHH-HHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAF-QREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~-~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
..++|++.+.||+|+||+||+|.. .+|+.||||+++..........+ .++...++.++||||+++++++..++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 457899999999999999999997 47899999999754433333333 4444457788999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||++ |+|.+++.........+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99998 4887777654444556999999999999999999999853 89999999999999999999999999998664
Q ss_pred cCCcceeeeccccccccccccc----cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYL----STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
.... .....||+.|+|||.+ .+..++.++||||||+++|||+||+.||+...... ...........
T Consensus 162 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~- 231 (290)
T 3fme_A 162 DDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-------QQLKQVVEEPS- 231 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-------HHHHHHHHSCC-
T ss_pred cccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH-------HHHHHHhccCC-
Confidence 3322 2334689999999996 56678999999999999999999999996422110 11111111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........+..+.+++.+||+.||++|||+.|+++
T Consensus 232 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 --------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 01111223457899999999999999999999986
No 175
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.6e-39 Score=325.44 Aligned_cols=252 Identities=19% Similarity=0.256 Sum_probs=201.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-----cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-----PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
.++|++.+.||+|+||.||+|... +|+.||+|.++.... ....+.+.+|+.++++++||||+++++++......
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 457899999999999999999976 689999999864321 12467899999999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEccc
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF----EAVVGDF 442 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 442 (619)
++||||+++++|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 99999999999999997532 389999999999999999999999 999999999999998877 8999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
|++....... ......|++.|+|||.+.+..++.++||||||+++|||+||+.||...... .........
T Consensus 157 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~ 226 (283)
T 3bhy_A 157 GIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--------ETLTNISAV 226 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTT
T ss_pred ccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--------HHHHHhHhc
Confidence 9998764332 223456899999999999999999999999999999999999999643211 111111100
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. . ...... ....+..+.+++.+||+.||++|||+.++++
T Consensus 227 ~-~--~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 227 N-Y--DFDEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp C-C--CCCHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c-c--CCcchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 0 0 000000 0112357889999999999999999999986
No 176
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.9e-41 Score=351.38 Aligned_cols=244 Identities=14% Similarity=0.111 Sum_probs=191.6
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccC--CCcchHHHHHHHHH---HHHHccCCCcccee-------ee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDF--ESPGGDAAFQREVE---MISVAVHRNLLRLI-------GF 359 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~~E~~---~l~~l~H~niv~l~-------~~ 359 (619)
.++|.+.+.||+|+||.||+|.+ .+|+.||||++... ......+.+.+|++ ++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 46999999998643 23445678999995 55566899999998 55
Q ss_pred eeCCCc-----------------ceeEecccccchhhhhhcccC---CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 007073 360 CTTPTE-----------------RLLVYPFMQNLSVAYRLREIK---PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 419 (619)
Q Consensus 360 ~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 419 (619)
+..++. .++||||+ +|+|.+++.... .....+++..+..++.|++.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 554432 78999999 689999997532 1123455688889999999999999999 99
Q ss_pred EecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeeccccccccccccccCC-----------CCCcchhhHHHHHH
Q 007073 420 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-----------KSSERTDVFGYGIM 488 (619)
Q Consensus 420 vH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~S~Gv~ 488 (619)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985322 3344567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 489 LLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 489 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+|||+||+.||........ ...+... ....+..+.+++.+||+.||++|||+.++++
T Consensus 303 l~elltg~~Pf~~~~~~~~-----------------~~~~~~~------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG-----------------SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CC-----------------SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccc-----------------hhhhhhh------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999964322111 1111111 0112357889999999999999999999985
No 177
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.7e-39 Score=332.90 Aligned_cols=257 Identities=19% Similarity=0.263 Sum_probs=199.8
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeC--CCccee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTT--PTERLL 368 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~l 368 (619)
.++|++.+.||+|+||+||+|.. .+|+.||||++.. ...+.+.+|++++++++ ||||+++++++.. ....++
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 36789999999999999999996 4789999999863 33577899999999997 9999999999987 556889
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEccccccee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-EAVVGDFGLAKL 447 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~ 447 (619)
||||+++++|..++.. ++...+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++.
T Consensus 111 v~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 9999999999998864 78889999999999999999999 999999999999999776 899999999987
Q ss_pred eccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc--
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR-- 524 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 524 (619)
...... .....||..|+|||.+.+ ..++.++|||||||++|||+||+.||........ .+............
T Consensus 181 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~---~l~~~~~~~~~~~~~~ 255 (330)
T 3nsz_A 181 YHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD---QLVRIAKVLGTEDLYD 255 (330)
T ss_dssp CCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH---HHHHHHHHHCHHHHHH
T ss_pred cCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH---HHHHHHHhcCCchhhh
Confidence 654322 334468999999999877 6789999999999999999999999954322111 11111111100000
Q ss_pred ------------cchhcc--------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 ------------LDAIVD--------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ------------~~~~~~--------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...... ...........+..+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000 00001111123468899999999999999999999986
No 178
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.7e-40 Score=341.06 Aligned_cols=252 Identities=19% Similarity=0.289 Sum_probs=200.0
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 369 (619)
..++|++.+.||+|+||.||+|..+ +|+.||||++..... .+.+|++++.++ +||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 3567999999999999999999975 689999999965332 235688888877 799999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC----CcEEEcccccc
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED----FEAVVGDFGLA 445 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla 445 (619)
|||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||+.++ +.+||+|||++
T Consensus 95 ~E~~~gg~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 95 TELMKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp ECCCCSCBHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 9999999999998753 3489999999999999999999999 99999999999998543 35999999999
Q ss_pred eeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
+....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ........... ..
T Consensus 168 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----~~~~~~~i~~~-~~ 240 (342)
T 2qr7_A 168 KQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-----PEEILARIGSG-KF 240 (342)
T ss_dssp EECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC-----HHHHHHHHHHC-CC
T ss_pred ccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC-----HHHHHHHHccC-Cc
Confidence 87654332 2334568999999999988889999999999999999999999997432111 11111221111 11
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. +........+..+.+++.+||+.||++|||+.++++
T Consensus 241 ~------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 S------LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp C------CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred c------cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 011112233467899999999999999999999875
No 179
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.1e-39 Score=330.47 Aligned_cols=248 Identities=23% Similarity=0.374 Sum_probs=197.1
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeC----CCcce
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT----PTERL 367 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~ 367 (619)
..|.+.+.||+|+||+||+|... ++..||+|.+.... .....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34777889999999999999974 68899999986433 34456778999999999999999999998864 34578
Q ss_pred eEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeC-CCCcEEEccccc
Q 007073 368 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK--IIHRDVKAANVLLD-EDFEAVVGDFGL 444 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~DfGl 444 (619)
+||||+++|+|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 106 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999997643 388999999999999999999998 7 99999999999998 789999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
+...... ......||+.|+|||.+. +.++.++||||||+++|+|+||+.||...... ............
T Consensus 179 ~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (290)
T 1t4h_A 179 ATLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSGVK 247 (290)
T ss_dssp GGGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTTCC
T ss_pred ccccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-------HHHHHHHhccCC
Confidence 9754332 233456899999999886 46999999999999999999999999643211 111111111111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... ....+..+.+++.+||+.||++|||+.++++
T Consensus 248 -~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 248 -PASF--------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -CGGG--------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -cccc--------CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0001 1112247899999999999999999999985
No 180
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.5e-40 Score=341.36 Aligned_cols=257 Identities=19% Similarity=0.270 Sum_probs=202.1
Q ss_pred HHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHH-HHHccCCCccceeeeeeCCCccee
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEM-ISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
...++|++.+.||+|+||.||+|.. .+|+.||||+++..........+..|..+ ++.++||||+++++++..++..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 4557888899999999999999996 47899999999765544555666667666 677899999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++ +|.+++.........+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999985 898888754334456899999999999999999999742 8999999999999999999999999999865
Q ss_pred ccCCcceeeecccccccccccccc----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLS----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
... .......||+.|+|||.+. ...++.++|||||||++|||+||+.||....... ...........
T Consensus 205 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~-------~~~~~~~~~~~ 275 (340)
T 3an0_A 205 VDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-------QQLKQVVEEPS 275 (340)
T ss_dssp SCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-------HHHHHHHHSCC
T ss_pred ccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH-------HHHHHHhcCCC
Confidence 422 1222346999999999964 3478999999999999999999999996422110 11111111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. .......+..+.+++.+||+.||++|||+.++++
T Consensus 276 ~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 P---------QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp C---------CCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C---------CCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 0011123467899999999999999999999985
No 181
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.5e-39 Score=335.38 Aligned_cols=264 Identities=25% Similarity=0.338 Sum_probs=199.0
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC-------
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------- 363 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------- 363 (619)
.++|++.+.||+|+||+||+|.. .+|+.||||++.... .......+.+|+++++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36789999999999999999997 478999999986433 233356788999999999999999999998763
Q ss_pred -CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007073 364 -TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 442 (619)
Q Consensus 364 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 442 (619)
+..++||||+++ ++...+.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 457899999986 6666665432 3489999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCC---cceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007073 443 GLAKLVDVRK---TNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 518 (619)
Q Consensus 443 Gla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 518 (619)
|+++...... ........||+.|+|||.+.+ ..++.++|||||||++|||+||+.||...... .....+..
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~ 243 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-----HQLALISQ 243 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHH
Confidence 9998765322 222334568999999999876 45899999999999999999999999753321 11111111
Q ss_pred Hhhh---cccchhccccc-------cC-CCC-HH------HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 519 LERE---KRLDAIVDRNL-------NK-NYN-IQ------EVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 519 ~~~~---~~~~~~~~~~l-------~~-~~~-~~------~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... ........... .. ... .. ....+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 1100 00000000000 00 000 01 1346889999999999999999999986
No 182
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-39 Score=349.27 Aligned_cols=195 Identities=24% Similarity=0.349 Sum_probs=154.3
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC-----Cc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TE 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 365 (619)
.++|++.+.||+|+||+||+|... +|+.||||++.... .....+.+.+|+++++.++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999965 78999999986532 233457789999999999999999999998433 56
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++||||+. ++|..++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP----VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhcccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 899999975 6888888653 3489999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCc--------------------------ceeeeccccccccccccc-cCCCCCcchhhHHHHHHHHHHHhC
Q 007073 446 KLVDVRKT--------------------------NVTTQVRGTMGHIAPEYL-STGKSSERTDVFGYGIMLLELVTG 495 (619)
Q Consensus 446 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~S~Gv~l~elltg 495 (619)
+....... ...+..+||+.|+|||++ .+..++.++|||||||++|||+||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 87642211 123445789999999976 556799999999999999999994
No 183
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.8e-39 Score=346.20 Aligned_cols=254 Identities=21% Similarity=0.307 Sum_probs=190.9
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-------CcchHHHHHHHHHHHHHccCCCccceeeeeeC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-------SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT 362 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-------~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 362 (619)
...++|.+.+.||+|+||+||+|... +++.||||++.... .......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999975 68999999986421 11122358899999999999999999999864
Q ss_pred CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEE
Q 007073 363 PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED---FEAVV 439 (619)
Q Consensus 363 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl 439 (619)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.+ ..+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred -CceEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 4578999999999999988753 3489999999999999999999999 99999999999999754 45999
Q ss_pred cccccceeeccCCcceeeeccccccccccccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007073 440 GDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST---GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 440 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 516 (619)
+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... .+....
T Consensus 284 ~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~----~~~~~i 357 (419)
T 3i6u_A 284 TDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQI 357 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC----CHHHHH
T ss_pred eecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH----HHHHHH
Confidence 999999876432 22345679999999999853 668899999999999999999999997432211 111111
Q ss_pred HHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 517 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ...... .+.. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 358 ~----~~~~~~--~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 358 T----SGKYNF--IPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp H----TTCCCC--CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred h----cCCCCC--Cchh----hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1 010000 0000 0112357899999999999999999999886
No 184
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.2e-40 Score=339.47 Aligned_cols=267 Identities=27% Similarity=0.374 Sum_probs=187.3
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
....++|.+.+.||+|+||.||+|... +++.||||++.........+.+.+|+.++++++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 456678999999999999999999964 6899999988654444456778899999999999999999999999999999
Q ss_pred EecccccchhhhhhcccC----CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 369 VYPFMQNLSVAYRLREIK----PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
||||+++++|.+++.... .....+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 999999999999987421 1234589999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCc----ceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH
Q 007073 445 AKLVDVRKT----NVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL 519 (619)
Q Consensus 445 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 519 (619)
+........ .......||+.|+|||.+.+ ..++.++||||||+++|||+||+.||....... ... ...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~---~~~ 240 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK----VLM---LTL 240 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG----HHH---HHH
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh----HHH---HHh
Confidence 876543211 11234568999999999875 568999999999999999999999997533211 000 000
Q ss_pred hhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 520 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ...................+..+.+++.+||+.||++|||+.++++
T Consensus 241 ~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 241 Q--NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp T--SSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred c--cCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 0000000000001111223357889999999999999999999985
No 185
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.1e-39 Score=327.91 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=205.1
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|.+.+.||+|+||.||+|... +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467888999999999999999976 58899999986432 233457788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999887532 388999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... +......... .
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~-~---- 232 (294)
T 2rku_A 167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKKNE-Y---- 232 (294)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTTC-C----
T ss_pred cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhhcc-C----
Confidence 3322 233456899999999999989999999999999999999999999643321 1111111110 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+......+.+++.+||+.||++|||+.++++
T Consensus 233 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 233 ------SIPKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ------CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 011222357889999999999999999999985
No 186
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.2e-39 Score=329.14 Aligned_cols=247 Identities=23% Similarity=0.338 Sum_probs=203.8
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|.+.+.||+|+||.||+|... +++.||+|.+.... .......+.+|++++++++||||+++++++...+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467899999999999999999975 57899999985321 122356789999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++|+|.+++.... .+++.....++.|+++||.|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999999999997643 388999999999999999999999 99999999999999999999999999997654
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
... .....|++.|+|||.+.+..++.++||||||+++|||+||+.||...... .........
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~------- 227 (284)
T 2vgo_A 166 SLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--------ETHRRIVNV------- 227 (284)
T ss_dssp SSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTT-------
T ss_pred ccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--------HHHHHHhcc-------
Confidence 322 23456899999999999999999999999999999999999999643211 111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+. .++...+..+.+++.+|++.||++|||+.++++
T Consensus 228 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 228 DL----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CC----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cc----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 00 112223457889999999999999999999985
No 187
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.8e-40 Score=367.13 Aligned_cols=261 Identities=21% Similarity=0.340 Sum_probs=208.2
Q ss_pred HHHHHhcCCcccCccccCCCceEEEEEeC----CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 288 ELQLATDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 288 el~~~~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
+.+...++|.+.+.||+|+||.||+|.+. .+..||||+++........+.|.+|+.++++++||||+++++++. .
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 44455678889999999999999999974 256799999876555555678999999999999999999999985 4
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG 536 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFG 536 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecC
Confidence 5689999999999999999753 23488999999999999999999999 99999999999999999999999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
+++..............+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... +........
T Consensus 537 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--------~~~~~i~~~ 608 (656)
T 2j0j_A 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGRIENG 608 (656)
T ss_dssp CCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHHT
T ss_pred CCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHcC
Confidence 998765443333344557889999999999999999999999999999997 99998643211 111121111
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
... ..+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 609 ~~~----------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 609 ERL----------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp CCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC----------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 111 11223346789999999999999999999999999873
No 188
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-39 Score=344.18 Aligned_cols=264 Identities=18% Similarity=0.226 Sum_probs=197.2
Q ss_pred HHHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC-----
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP----- 363 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 363 (619)
+...++|.+.+.||+|+||+||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 45677899999999999999999996 4799999999864322 224799999999999999999998443
Q ss_pred ---------------------------------CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHH
Q 007073 364 ---------------------------------TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEY 410 (619)
Q Consensus 364 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~ 410 (619)
...++||||++ |+|.+.+.........+++..+..++.|+++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 23779999998 58887777544445568999999999999999999
Q ss_pred HHhcCCCCeEecCCCCCcEEeC-CCCcEEEcccccceeeccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHH
Q 007073 411 LHEHCNPKIIHRDVKAANVLLD-EDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIM 488 (619)
Q Consensus 411 LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~ 488 (619)
||++ +|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||.+.+. .++.++||||+||+
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9999 999999999999997 688999999999987644332 3345689999999998765 48999999999999
Q ss_pred HHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc---------ccchh-----ccccccCCCCHHHHHHHHHHHHhccC
Q 007073 489 LLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK---------RLDAI-----VDRNLNKNYNIQEVETMIQVALLCTQ 554 (619)
Q Consensus 489 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-----~~~~l~~~~~~~~~~~l~~l~~~Cl~ 554 (619)
+|||++|+.||...... ..+...+.....+. ..... ........++...+..+.+++.+||+
T Consensus 232 l~ell~g~~pf~~~~~~----~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 307 (383)
T 3eb0_A 232 FGELILGKPLFSGETSI----DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307 (383)
T ss_dssp HHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC
T ss_pred HHHHHhCCCCCCCCChH----HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHcc
Confidence 99999999999753221 11111111110000 00000 00000001122334678999999999
Q ss_pred CCCCCCCCHHHHHH
Q 007073 555 ASPEDRPAMSEVVR 568 (619)
Q Consensus 555 ~dP~~RPs~~evl~ 568 (619)
.||++|||+.|+++
T Consensus 308 ~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 308 YEPDLRINPYEAMA 321 (383)
T ss_dssp SSGGGSCCHHHHHT
T ss_pred CChhhCCCHHHHhc
Confidence 99999999999984
No 189
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.5e-39 Score=335.47 Aligned_cols=259 Identities=18% Similarity=0.227 Sum_probs=203.5
Q ss_pred HHHHHhcCCccc-CccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHcc-CCCccceeeeeeCC
Q 007073 288 ELQLATDNFSEK-NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTP 363 (619)
Q Consensus 288 el~~~~~~~~~~-~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~ 363 (619)
..+.-.+.|.+. +.||+|+||.||+|... +|+.||+|++.... .......+.+|+.++..+. ||||+++++++...
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 334455667776 89999999999999975 68999999987532 2344678999999999985 69999999999999
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVG 440 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 440 (619)
...++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred CeEEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEe
Confidence 99999999999999999986532 24589999999999999999999999 9999999999999998 7899999
Q ss_pred ccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh
Q 007073 441 DFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 441 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
|||+++...... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .......
T Consensus 177 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~ 246 (327)
T 3lm5_A 177 DFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--------ETYLNIS 246 (327)
T ss_dssp CGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH
T ss_pred eCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--------HHHHHHH
Confidence 999998764332 223456999999999999999999999999999999999999999643221 1111111
Q ss_pred hhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 521 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 521 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... ...........+..+.+++.+||+.||++|||++++++
T Consensus 247 ~~~-------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 247 QVN-------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HTC-------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcc-------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 100 00011111233457889999999999999999999975
No 190
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-39 Score=336.94 Aligned_cols=258 Identities=24% Similarity=0.315 Sum_probs=194.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC------
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT------ 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 364 (619)
.++|...+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467889999999999999999974 79999999986433 2334567889999999999999999999997653
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||||+ +++|.+++.. ..++...+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 7899998875 2388899999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh-
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE- 522 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 522 (619)
++..... .....||+.|+|||.+.+ ..++.++||||+||++|||+||+.||....... .+..........
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~l~~i~~~~g~~~ 246 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD----QLKEIMKVTGTPP 246 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCC
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCC
Confidence 9875432 334568999999999877 679999999999999999999999997533211 011111100000
Q ss_pred -c---------------ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 -K---------------RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 -~---------------~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. .+.......+. .........+.+++.+|++.||++|||+.++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0 00000000000 111233467899999999999999999999986
No 191
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=338.95 Aligned_cols=256 Identities=23% Similarity=0.290 Sum_probs=187.4
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeee-------
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCT------- 361 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~------- 361 (619)
....+|.+.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 34568999999999999999999974 7899999998543 3445677899999999996 999999999984
Q ss_pred -CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCcEE
Q 007073 362 -TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK--IIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 362 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~k 438 (619)
.....++||||+. |+|.+++..... ...+++..+..++.|++.||+|||++ + |+||||||+|||++.++.+|
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEE
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEE
Confidence 2334789999996 688888865332 23489999999999999999999998 7 99999999999999999999
Q ss_pred EcccccceeeccCCcce-----------eeeccccccccccccc---cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcc
Q 007073 439 VGDFGLAKLVDVRKTNV-----------TTQVRGTMGHIAPEYL---STGKSSERTDVFGYGIMLLELVTGQRAIDFSRL 504 (619)
Q Consensus 439 l~DfGla~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~ 504 (619)
|+|||+++......... .....||+.|+|||.+ .+..++.++||||||+++|||+||+.||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 99999998765332211 1134589999999998 566789999999999999999999999863221
Q ss_pred ccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 505 EEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
.. +................+.+++.+||+.||++|||+.|+++.|+..
T Consensus 259 ~~---------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 259 LR---------------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp ----------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HH---------------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 10 0000000001111123578999999999999999999999999875
No 192
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.2e-39 Score=334.22 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=205.1
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|.+.+.||+|+||.||++... +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888999999999999999975 57899999986432 234567788999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999887532 388999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... +......... .
T Consensus 193 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~-~---- 258 (335)
T 2owb_A 193 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKKNE-Y---- 258 (335)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTC-C----
T ss_pred cCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHhcCC-C----
Confidence 3322 233456899999999999999999999999999999999999999643211 1111111110 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+......+.+++.+||+.||++|||+.|+++
T Consensus 259 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 259 ------SIPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 011122357889999999999999999999985
No 193
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.6e-38 Score=332.87 Aligned_cols=259 Identities=22% Similarity=0.333 Sum_probs=205.4
Q ss_pred HHHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc-------chHHHHHHHHHHHHHc-cCCCccce
Q 007073 286 WRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-------GGDAAFQREVEMISVA-VHRNLLRL 356 (619)
Q Consensus 286 ~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-------~~~~~~~~E~~~l~~l-~H~niv~l 356 (619)
+.......++|.+.+.||+|+||.||+|... +|+.||||++...... ...+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444455678999999999999999999985 7999999998643211 1145678999999999 79999999
Q ss_pred eeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc
Q 007073 357 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE 436 (619)
Q Consensus 357 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 436 (619)
++++......++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 99999999999999999999999999753 2389999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceeeccCCcceeeeccccccccccccccC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch
Q 007073 437 AVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV 510 (619)
Q Consensus 437 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~ 510 (619)
+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... .
T Consensus 239 ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-----~ 311 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-----I 311 (365)
T ss_dssp EEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----H
T ss_pred EEEEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-----H
Confidence 9999999998765432 2334579999999999863 3588999999999999999999999964221 1
Q ss_pred hHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 511 LLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
......... .... ..+. . ...+..+.+++.+||+.||++|||+.++++
T Consensus 312 ---~~~~~i~~~-~~~~-~~~~-~----~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 312 ---LMLRMIMEG-QYQF-SSPE-W----DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ---HHHHHHHHT-CCCC-CHHH-H----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---HHHHHHHhC-CCCC-CCcc-c----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111110 0000 0000 0 012356889999999999999999999986
No 194
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.5e-39 Score=335.80 Aligned_cols=265 Identities=19% Similarity=0.269 Sum_probs=193.1
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-cchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
...++|.+.+.||+|+||+||+|... +|+.||||+++.... ......+.+|++++++++||||+++++++......++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 45678999999999999999999964 789999999964332 2234567899999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe-----CCCCcEEEcccc
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL-----DEDFEAVVGDFG 443 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll-----~~~~~~kl~DfG 443 (619)
||||+++ +|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||
T Consensus 111 v~e~~~~-~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEECCSE-EHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEecCCC-CHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 9999985 8988887643 388999999999999999999999 99999999999999 555679999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
+++....... ......||+.|+|||.+.+. .++.++|||||||++|||+||+.||...... ..+..........
T Consensus 183 ~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~ 257 (329)
T 3gbz_A 183 LARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI----DQLFKIFEVLGLP 257 (329)
T ss_dssp HHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCC
T ss_pred CccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH----HHHHHHHHHhCCC
Confidence 9986643322 23345689999999999874 4899999999999999999999999653221 1111111111100
Q ss_pred cc--cchhc-----ccc---ccCC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 KR--LDAIV-----DRN---LNKN-----YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 ~~--~~~~~-----~~~---l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ..... ... .... .......++.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00 00000 000 0000 00112367889999999999999999999985
No 195
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-39 Score=334.81 Aligned_cols=266 Identities=23% Similarity=0.276 Sum_probs=196.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcc----hHHHHHHHHHHHHHccCCCccceeeeeeCCCcc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPG----GDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 366 (619)
..++|.+.+.||+|+||.||+|... +|+.||||++....... ..+.+.+|++++++++||||+++++++......
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4578999999999999999999975 68999999986432211 124678999999999999999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++ +|...+... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999986 787777652 33478889999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc--
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK-- 523 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 523 (619)
...... .......||+.|+|||.+.+. .++.++|||||||++|||++|..||...... ..+...........
T Consensus 161 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~----~~~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 161 SFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL----DQLTRIFETLGTPTEE 235 (346)
T ss_dssp TTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCTT
T ss_pred eccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHHHcCCCChh
Confidence 664332 223345689999999998764 5899999999999999999999998643211 11111111111000
Q ss_pred ccch---hccc---cccCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 524 RLDA---IVDR---NLNKNYN-----IQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 524 ~~~~---~~~~---~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
.... ..+. ......+ ...+..+.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 0000 0000001 2233678999999999999999999999863
No 196
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.9e-40 Score=346.09 Aligned_cols=255 Identities=10% Similarity=0.014 Sum_probs=181.8
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHHHc--cCCCcccee-------eee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVA--VHRNLLRLI-------GFC 360 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l--~H~niv~l~-------~~~ 360 (619)
..+|...+.||+|+||.||+|.+. +|+.||||++..... ....+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999975 789999999976432 23456677886655555 599988754 444
Q ss_pred eCC-----------------CcceeEecccccchhhhhhcccCCCCCCcCHHHH------HHHHHHHHHHHHHHHhcCCC
Q 007073 361 TTP-----------------TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR------KRVALGAARGLEYLHEHCNP 417 (619)
Q Consensus 361 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~~ 417 (619)
..+ ...++||||++ |+|.+++..... .+++..+ ..++.|++.||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 332 23799999999 899999986421 2344445 67889999999999999
Q ss_pred CeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhC
Q 007073 418 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTG 495 (619)
Q Consensus 418 ~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg 495 (619)
+|+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||.+.+ ..++.++|||||||++|||+||
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 999999999999999999999999999986532 1224457799999999987 6799999999999999999999
Q ss_pred CCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 496 QRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 496 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+.||........... .....................+..+.+++.+||+.||++|||+.++++
T Consensus 290 ~~Pf~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKGSW----------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTTCC----------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCcccccch----------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999975432111000 000000000111111111233468899999999999999999999874
No 197
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=327.10 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=197.2
Q ss_pred CCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEeccc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
+|....+||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 344556899999999999996 468899999986533 345677899999999999999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-CCcEEEcccccceeeccCC
Q 007073 374 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-DFEAVVGDFGLAKLVDVRK 452 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~~~~ 452 (619)
++++|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++.......
T Consensus 102 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 102 PGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp SEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 9999999997642 233467888899999999999999999 9999999999999987 8999999999998764322
Q ss_pred cceeeeccccccccccccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhcc
Q 007073 453 TNVTTQVRGTMGHIAPEYLSTGK--SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 530 (619)
Q Consensus 453 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (619)
. ......||+.|+|||.+.+.. ++.++||||||+++|||+||+.||....... . ..... .... ..
T Consensus 178 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~---~~~~~-~~~~-----~~ 244 (295)
T 2clq_A 178 P-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ---A---AMFKV-GMFK-----VH 244 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH---H---HHHHH-HHHC-----CC
T ss_pred C-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh---H---HHHhh-cccc-----cc
Confidence 2 223456899999999997653 7899999999999999999999985321110 0 00000 0000 01
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 531 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 531 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...+...+..+.+++.+||+.||++||++.++++
T Consensus 245 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 245 ----PEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----CCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1122233467889999999999999999999974
No 198
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.2e-39 Score=341.24 Aligned_cols=270 Identities=20% Similarity=0.258 Sum_probs=198.7
Q ss_pred HHHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcc----------hHHHHHHHHHHHHHccCCCccc
Q 007073 286 WRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG----------GDAAFQREVEMISVAVHRNLLR 355 (619)
Q Consensus 286 ~~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~ 355 (619)
..++....++|.+.+.||+|+||.||+|...+|+.||||++....... ..+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 467888899999999999999999999998889999999986432211 2378899999999999999999
Q ss_pred eeeeeeCC-----CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007073 356 LIGFCTTP-----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 430 (619)
Q Consensus 356 l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 430 (619)
+++++... ...++||||++ |+|.+.+... ...+++..+..++.|++.||.|||++ +|+||||||+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99998442 35789999998 5777777642 33589999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc
Q 007073 431 LDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD 509 (619)
Q Consensus 431 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~ 509 (619)
++.++.+||+|||+++..... .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||.......
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--- 241 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN--- 241 (362)
T ss_dssp ECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---
T ss_pred EcCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH---
Confidence 999999999999999754332 22334568999999999877 678999999999999999999999997543211
Q ss_pred hhHHHHHHHHhhhc----------ccchhccccccC-------CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 510 VLLLDHVKKLEREK----------RLDAIVDRNLNK-------NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 510 ~~~~~~~~~~~~~~----------~~~~~~~~~l~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
............. ............ ...+.....+.+++.+||+.||++|||+.|+++
T Consensus 242 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 242 -QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp -HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1111111000000 000000000000 001122457899999999999999999999985
No 199
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.6e-38 Score=343.24 Aligned_cols=260 Identities=18% Similarity=0.228 Sum_probs=204.0
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCC-CccceeeeeeCCCcceeEe
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR-NLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~ 370 (619)
.++|.+.+.||+|+||.||+|.+ .+|+.||||++..... ...+..|+++++.++|+ ++..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 46899999999999999999996 4789999998764332 23578899999999874 5555556667777889999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEccccccee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKL 447 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~ 447 (619)
||+ +++|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 83 e~~-g~sL~~ll~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp ECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred ECC-CCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999 899999997532 3489999999999999999999999 99999999999999 5889999999999987
Q ss_pred eccCCcc------eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007073 448 VDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 521 (619)
Q Consensus 448 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 521 (619)
....... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||........ ............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i~~~~~ 233 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKISEKKV 233 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHHHHHHH
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHHhhccc
Confidence 7543322 12256799999999999999999999999999999999999999975432211 111111111111
Q ss_pred hcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007073 522 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 573 (619)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 573 (619)
......+.. ..+.++.+++..||+.+|++||++.+|++.|+.+
T Consensus 234 ~~~~~~l~~---------~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 234 ATSIEALCR---------GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HSCHHHHHT---------TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred cccHHHHhc---------CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 111111111 1235789999999999999999999999999876
No 200
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.9e-39 Score=329.79 Aligned_cols=255 Identities=22% Similarity=0.328 Sum_probs=203.6
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..++|.+.+.||+|+||.||+|... +|+.||+|.+.... ......+.+|+.++++++||||+++++++......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 3467899999999999999999975 78999999987432 233467889999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEccccccee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKL 447 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~ 447 (619)
||+++++|.+++.... .+++.....++.|++.||.|||++ +|+||||||+||++ +.++.+||+|||++..
T Consensus 86 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 86 QLVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp CCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EcCCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 9999999999887643 388999999999999999999999 99999999999999 7889999999999975
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .......... ..
T Consensus 159 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~-~~- 225 (304)
T 2jam_A 159 EQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--------KLFEKIKEGY-YE- 225 (304)
T ss_dssp CCCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHCC-CC-
T ss_pred cCCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCC-CC-
Confidence 4322 223346899999999999999999999999999999999999998643211 1111111110 00
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHhc
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR--MLEG 572 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~ 572 (619)
.........+..+.+++.+|++.||++|||+.++++ .+++
T Consensus 226 -----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (304)
T 2jam_A 226 -----FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267 (304)
T ss_dssp -----CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred -----CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence 001112233467899999999999999999999985 4444
No 201
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-38 Score=333.71 Aligned_cols=263 Identities=19% Similarity=0.300 Sum_probs=201.5
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC-----Ccc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 366 (619)
.++|++.+.||+|+||.||+|... +++.||||++.........+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 467999999999999999999965 68899999997655555567899999999999999999999998655 357
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+. |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 89999998 4888888652 388999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcce--eeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 447 LVDVRKTNV--TTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 447 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
......... .....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||........ +.........+.
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~~~~~ 252 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ----LNHILGILGSPS 252 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH----HHHHHHHHCSCC
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH----HHHHHHHhCCCC
Confidence 765432221 234579999999998754 4589999999999999999999999975432211 111111000000
Q ss_pred --ccc------------hhcccccc--CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 524 --RLD------------AIVDRNLN--KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 524 --~~~------------~~~~~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... ....+... ....+.....+.+++.+|++.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 00000000 0001122357899999999999999999999985
No 202
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.5e-39 Score=345.61 Aligned_cols=200 Identities=25% Similarity=0.333 Sum_probs=167.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC-----Cc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TE 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 365 (619)
.++|.+.+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+++++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999975 68899999997533 233457889999999999999999999998766 56
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++||||+. |+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP----IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999987 5999888753 3489999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc---------------------eeeeccccccccccccc-cCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 007073 446 KLVDVRKTN---------------------VTTQVRGTMGHIAPEYL-STGKSSERTDVFGYGIMLLELVTGQRAID 500 (619)
Q Consensus 446 ~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~S~Gv~l~elltg~~p~~ 500 (619)
+........ ..+...||+.|+|||++ ....++.++||||+||++|||+||..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 976533211 23456799999999986 55679999999999999999998665553
No 203
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.5e-39 Score=327.89 Aligned_cols=253 Identities=21% Similarity=0.284 Sum_probs=198.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
..++|++.+.||+|+||.||+|... +|+.||+|.+... .....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC-CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 4567899999999999999999986 5899999998643 3445678999999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 450 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 450 (619)
||+++++|.+++.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 96 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp ECCTTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EeCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999887532 3388999999999999999999999 999999999999999999999999998764321
Q ss_pred CCcceeeeccccccccccccc-----cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 451 RKTNVTTQVRGTMGHIAPEYL-----STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 451 ~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
. ........||+.|+|||.+ .+..++.++||||||+++|||+||+.||...... ............
T Consensus 170 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~ 240 (302)
T 2j7t_A 170 T-LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSDPP 240 (302)
T ss_dssp H-HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSCCC
T ss_pred c-ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--------HHHHHHhccCCc
Confidence 1 1112334689999999998 4677899999999999999999999998643211 111111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ..+...+..+.+++.+||+.||++|||+.++++
T Consensus 241 -~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 241 -TL-------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -CC-------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -cc-------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 011223457899999999999999999999875
No 204
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.9e-39 Score=347.52 Aligned_cols=253 Identities=22% Similarity=0.292 Sum_probs=202.2
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
..++|.+.+.||+|+||+||+|... +|+.||||++.... .......+.+|++++++++||||+++++++......++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3467999999999999999999975 78999999986321 233467889999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC---CCCcEEEcccccce
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAK 446 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla~ 446 (619)
|||+++|+|.+.+.... .+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999887643 388999999999999999999999 999999999999995 45679999999998
Q ss_pred eeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
..... .......||+.|+|||++.+ .++.++||||+||++|+|+||+.||..... . +............
T Consensus 173 ~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~---~~~~~i~~~~~~~ 241 (486)
T 3mwu_A 173 CFQQN--TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----Y---DILKRVETGKYAF 241 (486)
T ss_dssp TBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----H---HHHHHHHHTCCCS
T ss_pred ECCCC--CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----H---HHHHHHHhCCCCC
Confidence 65432 22334569999999999875 599999999999999999999999964321 1 1111111111000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 569 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 569 (619)
. .......+..+.+++.+||+.||++|||+.++++.
T Consensus 242 ~-------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 D-------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp C-------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred C-------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00011223578899999999999999999999863
No 205
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.3e-39 Score=337.07 Aligned_cols=259 Identities=20% Similarity=0.284 Sum_probs=203.6
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCc----------------chHHHHHHHHHHHHHccCCCccce
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESP----------------GGDAAFQREVEMISVAVHRNLLRL 356 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~----------------~~~~~~~~E~~~l~~l~H~niv~l 356 (619)
.++|.+.+.||+|+||.||+|.. +|+.||||++...... ...+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999999 8999999998632111 112789999999999999999999
Q ss_pred eeeeeCCCcceeEecccccchhhhh------hcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcE
Q 007073 357 IGFCTTPTERLLVYPFMQNLSVAYR------LREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANV 429 (619)
Q Consensus 357 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NI 429 (619)
++++...+..++||||+++|+|.++ +... ....+++..+..++.|++.||.|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 4431 13558999999999999999999999 8 999999999999
Q ss_pred EeCCCCcEEEcccccceeeccCCcceeeeccccccccccccccCC-CCCc-chhhHHHHHHHHHHHhCCCCCCCCccccc
Q 007073 430 LLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSE-RTDVFGYGIMLLELVTGQRAIDFSRLEEE 507 (619)
Q Consensus 430 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~S~Gv~l~elltg~~p~~~~~~~~~ 507 (619)
+++.++.+||+|||.+...... ......||..|+|||.+.+. .++. ++||||||+++|||+||+.||......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-- 258 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-- 258 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--
Confidence 9999999999999999876433 33455789999999999887 6666 999999999999999999999753321
Q ss_pred cchhHHHHHHHHhhhcccchhcc------ccc---cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 508 DDVLLLDHVKKLEREKRLDAIVD------RNL---NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~------~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ......... ......+ +.. ........+..+.+++.+||+.||++|||+.|+++
T Consensus 259 --~---~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 --V---ELFNNIRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --H---HHHHHHTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --H---HHHHHHhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 111111111 1100000 000 00001234467899999999999999999999986
No 206
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=325.32 Aligned_cols=252 Identities=22% Similarity=0.305 Sum_probs=199.4
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
...++|++.+.||+|+||.||+|... +|+.||||.+.... ....+.+|+.++++++||||+++++++......++|
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 34567999999999999999999975 58999999986432 346789999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.+||+|||++....
T Consensus 103 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 103 MEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred eecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 9999999999998742 23488999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .......... ...
T Consensus 177 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~-~~~-- 244 (314)
T 3com_A 177 DTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--------RAIFMIPTNP-PPT-- 244 (314)
T ss_dssp TTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSC-CCC--
T ss_pred hhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhcCC-Ccc--
Confidence 3322 233456899999999999999999999999999999999999999643211 0111111100 000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 530 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 530 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ..+...+..+.+++.+||+.||++|||+.++++
T Consensus 245 ---~--~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 245 ---F--RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---C--SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---c--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 011222457899999999999999999999985
No 207
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1e-38 Score=338.13 Aligned_cols=265 Identities=20% Similarity=0.237 Sum_probs=200.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc--------CCCccceeeeee--
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--------HRNLLRLIGFCT-- 361 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~-- 361 (619)
.++|.+.+.||+|+||+||+|... +|+.||||+++.. ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 478999999999999999999964 6889999998632 334577889999999886 788999999987
Q ss_pred --CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----
Q 007073 362 --TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF---- 435 (619)
Q Consensus 362 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 435 (619)
.....++||||+.+ ++.+.+.... ...+++..+..++.|++.||+|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 114 GVNGTHICMVFEVLGH-HLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp ETTEEEEEEEECCCCC-BHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHH
T ss_pred CCCCceEEEEEeccCc-cHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhh
Confidence 55678999999955 5555554322 234899999999999999999999964 799999999999999775
Q ss_pred ---------------------------------------------cEEEcccccceeeccCCcceeeecccccccccccc
Q 007073 436 ---------------------------------------------EAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEY 470 (619)
Q Consensus 436 ---------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~ 470 (619)
.+||+|||+++..... .....||+.|+|||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChh
Confidence 7999999999876432 233468999999999
Q ss_pred ccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccccc-chhHHHHHHHHhhh--------c-ccchhcccc--------
Q 007073 471 LSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEED-DVLLLDHVKKLERE--------K-RLDAIVDRN-------- 532 (619)
Q Consensus 471 ~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~--------~-~~~~~~~~~-------- 532 (619)
+.+..++.++|||||||++|||+||+.||......... .............. . .........
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 99999999999999999999999999999754332211 11111111111000 0 000000000
Q ss_pred -----------ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 533 -----------LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 533 -----------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
-...........+.+|+.+||+.||++|||+.|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 001235677788999999999999999999999985
No 208
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.6e-38 Score=347.44 Aligned_cols=252 Identities=22% Similarity=0.294 Sum_probs=200.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCc------------chHHHHHHHHHHHHHccCCCccceee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP------------GGDAAFQREVEMISVAVHRNLLRLIG 358 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------------~~~~~~~~E~~~l~~l~H~niv~l~~ 358 (619)
..++|.+.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999975 6889999998653211 34567899999999999999999999
Q ss_pred eeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---
Q 007073 359 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF--- 435 (619)
Q Consensus 359 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 435 (619)
++......++||||+++|+|.+.+.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 9999999999999999999999887643 389999999999999999999999 999999999999998775
Q ss_pred cEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007073 436 EAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 515 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 515 (619)
.+||+|||+++...... ......||+.|+|||.+. +.++.++||||+||++|+|++|+.||...... ..
T Consensus 187 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~ 255 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--------DI 255 (504)
T ss_dssp SEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HH
T ss_pred cEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HH
Confidence 69999999998765432 233456999999999986 56999999999999999999999999753221 11
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.......... ..... ....+..+.+++.+|++.||++|||+.|+++
T Consensus 256 ~~~i~~~~~~---~~~~~----~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 256 IKKVEKGKYY---FDFND----WKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHHCCCC---CCHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCC---CCccc----cCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111111100 00000 0112357899999999999999999999984
No 209
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=337.66 Aligned_cols=257 Identities=24% Similarity=0.339 Sum_probs=197.7
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeC--
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT-- 362 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~-- 362 (619)
.++....++|++.+.||+|+||.||+|.+. +|+.||||++... ......+.+|+.+++++ +||||+++++++..
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC--cccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 344456788999999999999999999974 7899999998643 23457789999999998 79999999999876
Q ss_pred ----CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 363 ----PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 363 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
....++||||+++|+|.+++.... ...++...+..++.|++.||.|||++ +|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence 456899999999999999997642 23488899999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCCcceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH
Q 007073 439 VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 439 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 513 (619)
|+|||++........ ......||+.|+|||.+. +..++.++||||||+++|||+||+.||......
T Consensus 170 l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------- 240 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------- 240 (326)
T ss_dssp ECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--------
T ss_pred EeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--------
Confidence 999999986543221 223446899999999987 567899999999999999999999998643211
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.......... ... . .....+..+.+++.+||+.||++||++.++++
T Consensus 241 ~~~~~~~~~~-~~~-----~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 241 RALFLIPRNP-APR-----L---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHHHHSC-CCC-----C---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHhhcCc-ccc-----C---CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111111110 000 0 01122357889999999999999999999986
No 210
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.6e-39 Score=325.72 Aligned_cols=264 Identities=22% Similarity=0.304 Sum_probs=200.0
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEec
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 371 (619)
++|+..+.||+|+||.||+|... +|+.||||++.... .......+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999975 78999999986432 22234678899999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007073 372 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 451 (619)
Q Consensus 372 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 451 (619)
|++ ++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 998 599988876432 3378899999999999999999999 9999999999999999999999999999865432
Q ss_pred CcceeeeccccccccccccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc--chh
Q 007073 452 KTNVTTQVRGTMGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL--DAI 528 (619)
Q Consensus 452 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 528 (619)
.. ......||+.|+|||.+.+.. ++.++||||||+++|||+||+.||...... ................ ...
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 157 VR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI----DQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp SB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTG
T ss_pred cc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHHHHhCCCchhhhhHh
Confidence 21 223346899999999998765 799999999999999999999999753321 1111111111110000 000
Q ss_pred -----ccccccC----C---CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 529 -----VDRNLNK----N---YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 529 -----~~~~l~~----~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+.... . ..+..+.++.+++.+|++.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 0 00123467889999999999999999999986
No 211
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.5e-38 Score=346.82 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=198.1
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
.++|.+.+.||+|+||+||+|... ++..||+|++.... .......+.+|+.+++.++||||+++++++......++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457899999999999999999975 68999999987533 2334577899999999999999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEccccccee
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFGLAKL 447 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGla~~ 447 (619)
||+++|+|.+.+.... .+++..+..++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999998887643 388999999999999999999999 9999999999999976 45599999999987
Q ss_pred eccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 448 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 448 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
..... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||...... +...........
T Consensus 189 ~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~-- 255 (494)
T 3lij_A 189 FENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--------EILRKVEKGKYT-- 255 (494)
T ss_dssp CBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCC--
T ss_pred CCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC--
Confidence 65432 233456999999999886 56999999999999999999999999743221 111111111100
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..... ....+..+.+++.+||+.||++|||+.++++
T Consensus 256 -~~~~~----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 256 -FDSPE----WKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp -CCSGG----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CCchh----cccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 00000 1122357889999999999999999999884
No 212
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.3e-39 Score=349.00 Aligned_cols=252 Identities=25% Similarity=0.325 Sum_probs=204.6
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..++|.+.+.||+|+||.||+|... +|+.||||++.... .......+.+|+.++++++||||+++++++......++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3467999999999999999999975 78999999986432 23456789999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEcccccc
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLA 445 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla 445 (619)
||||+.+|+|.+.+... ..+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 99999999999988753 3489999999999999999999999 99999999999999 56789999999999
Q ss_pred eeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
+...... ......||+.|+|||.+.+ .++.++||||+||++|+|+||+.||..... . +...........
T Consensus 177 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~---~~~~~i~~~~~~ 245 (484)
T 3nyv_A 177 THFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE-----Y---DILKKVEKGKYT 245 (484)
T ss_dssp HHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----H---HHHHHHHHCCCC
T ss_pred EEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-----H---HHHHHHHcCCCC
Confidence 8664332 2334569999999999865 699999999999999999999999974321 1 111111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. .......+..+.+++.+||+.||++|||+.++++
T Consensus 246 ~~-------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 246 FE-------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CC-------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC-------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 00 0001123467899999999999999999999984
No 213
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=337.55 Aligned_cols=262 Identities=24% Similarity=0.419 Sum_probs=202.7
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
.++....++|++.+.||+|+||.||+|.+.+ .||+|.++... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 3445567889999999999999999999853 59999986432 23334567889999999999999999999999999
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++||||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||++
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~ 176 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLF 176 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCC
T ss_pred eEEEeecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCc
Confidence 99999999999999999763 23488999999999999999999999 999999999999998 679999999998
Q ss_pred eeeccCC----cceeeeccccccccccccccC---------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhH
Q 007073 446 KLVDVRK----TNVTTQVRGTMGHIAPEYLST---------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLL 512 (619)
Q Consensus 446 ~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~ 512 (619)
+...... ........||+.|+|||.+.+ ..++.++||||||+++|||+||+.||......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------- 249 (319)
T 2y4i_B 177 SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE------- 249 (319)
T ss_dssp C----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-------
T ss_pred cccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------
Confidence 7653211 112233458999999999864 45789999999999999999999999643211
Q ss_pred HHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007073 513 LDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 574 (619)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 574 (619)
.......... ..... ....+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 250 -~~~~~~~~~~-~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 250 -AIIWQMGTGM-KPNLS--------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp -HHHHHHHTTC-CCCCC--------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred -HHHHHhccCC-CCCCC--------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 1111111111 00100 1112346889999999999999999999999999864
No 214
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.7e-39 Score=321.35 Aligned_cols=249 Identities=23% Similarity=0.364 Sum_probs=196.0
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
..++|.+.+.||+|+||.||+|... +|+.||||.+.... .....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3467899999999999999999976 79999999986421 22345678999999999999999999999999999999
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++++|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 89 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 999999999999997643 388999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 527 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (619)
.... ......|++.|+|||.+.+..+ +.++||||||+++|+|+||+.||...... ......... ..
T Consensus 162 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~-~~-- 228 (276)
T 2h6d_A 162 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--------TLFKKIRGG-VF-- 228 (276)
T ss_dssp CC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-CC--
T ss_pred CCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--------HHHHHhhcC-cc--
Confidence 4322 2234468999999999987765 68999999999999999999999643211 111111111 00
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 528 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 528 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..+......+.+++.+|++.||++|||+.++++
T Consensus 229 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 --------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 011122357889999999999999999999986
No 215
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.9e-38 Score=330.76 Aligned_cols=263 Identities=22% Similarity=0.302 Sum_probs=199.5
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC-----Ccc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 366 (619)
.++|.+.+.||+|+||.||+|... +|+.||||++...........+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999975 68999999997555455567788999999999999999999988654 568
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+. ++|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 588888865 2388999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcc---------eeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007073 447 LVDVRKTN---------VTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 516 (619)
Q Consensus 447 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 516 (619)
........ ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~ 236 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH----QLLLIF 236 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH----HHHHHH
Confidence 76532211 1223468999999998764 678999999999999999999999997543210 010111
Q ss_pred HHHhhhc---cc--------chhcccc--ccC----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 517 KKLEREK---RL--------DAIVDRN--LNK----NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 517 ~~~~~~~---~~--------~~~~~~~--l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
....... .. .+..... ... ...+..+..+.+++.+||+.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 00 0000000 000 001123467889999999999999999999986
No 216
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.2e-39 Score=342.90 Aligned_cols=261 Identities=21% Similarity=0.274 Sum_probs=194.0
Q ss_pred hcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc------c
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE------R 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~ 366 (619)
..+|...+.||+|+||+||+|...++..||+|++...... ..+|+++++.++||||+++++++..... .
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 3568889999999999999999987778999988643221 2369999999999999999999855433 6
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCcEEEcccccc
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-EDFEAVVGDFGLA 445 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla 445 (619)
++||||++++.+..... .......+++..+..++.|+++||+|||++ +|+||||||+|||++ .++.+||+|||++
T Consensus 114 ~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRH-YAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEECCSEEHHHHHHH-HHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeeccCccHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 79999998765444332 222234588999999999999999999999 999999999999999 7999999999999
Q ss_pred eeeccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc-
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK- 523 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 523 (619)
+....... .....||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... ..+.........+.
T Consensus 190 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~l~~i~~~~g~p~~ 263 (394)
T 4e7w_A 190 KILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI----DQLVEIIKVLGTPSR 263 (394)
T ss_dssp EECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCH
T ss_pred ccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCH
Confidence 87643322 3345689999999998765 5899999999999999999999999753321 11111111110000
Q ss_pred --------c-----cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 524 --------R-----LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 524 --------~-----~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ...+....+...+....+.++.+++.+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0 00000000000111223468899999999999999999999985
No 217
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.4e-39 Score=328.67 Aligned_cols=254 Identities=21% Similarity=0.312 Sum_probs=197.2
Q ss_pred HHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHcc--CCCccceeeeeeCCCcc
Q 007073 290 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAV--HRNLLRLIGFCTTPTER 366 (619)
Q Consensus 290 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~ 366 (619)
....++|++.+.||+|+||.||++...+|+.||||.+.... .....+.+.+|++++++++ |+||+++++++...+..
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 34567899999999999999999999889999999986433 3345578899999999997 59999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||| +.+++|.+++.... .+++..+..++.|+++||.|||++ +|+||||||+||++++ +.+||+|||+++
T Consensus 104 ~lv~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~ 174 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIAN 174 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSC
T ss_pred EEEEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccc
Confidence 99999 67889999997632 488899999999999999999999 9999999999999964 899999999998
Q ss_pred eeccCCcc-eeeeccccccccccccccC-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007073 447 LVDVRKTN-VTTQVRGTMGHIAPEYLST-----------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 447 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 514 (619)
........ ......||+.|+|||.+.+ ..++.++||||||+++|||+||+.||...... ..
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~~ 247 (313)
T 3cek_A 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------IS 247 (313)
T ss_dssp C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HH
T ss_pred cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-------HH
Confidence 76433222 2234568999999999875 46889999999999999999999999642210 01
Q ss_pred HHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 515 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... ..++.....++...+..+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 248 KLHA---------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHH---------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHH---------HHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1111 11111111112222357899999999999999999999985
No 218
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.2e-38 Score=328.01 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=195.9
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC-------cchHHHHHHHHHHHHHccCCCccceeeeeeCC
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-------PGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 363 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 363 (619)
..++|.+.+.||+|+||.||+|... +|+.||||.+..... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3567999999999999999999975 688999999864321 12234588999999999999999999998765
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVG 440 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 440 (619)
. .++||||+++++|.+++... ..+++.....++.|++.||.|||++ +|+||||||+||+++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 5 89999999999999988753 3488999999999999999999999 9999999999999987654 9999
Q ss_pred ccccceeeccCCcceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007073 441 DFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 517 (619)
Q Consensus 441 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 517 (619)
|||+++..... .......||+.|+|||.+. ...++.++|||||||++|||+||+.||....... .+.....
T Consensus 160 Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~ 233 (322)
T 2ycf_A 160 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQIT 233 (322)
T ss_dssp CCTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS----CHHHHHH
T ss_pred cCccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH----HHHHHHH
Confidence 99999876432 2223456899999999874 5678999999999999999999999997433211 1111111
Q ss_pred HHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 518 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 518 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. +.... .+.. ....+..+.+++.+||+.||++|||+.++++
T Consensus 234 ~----~~~~~--~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 S----GKYNF--IPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp H----TCCCC--CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred h----Ccccc--Cchh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1 10000 0000 0112357899999999999999999999885
No 219
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8.9e-39 Score=341.85 Aligned_cols=198 Identities=20% Similarity=0.252 Sum_probs=171.5
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHc------cCCCccceeeeeeCCCc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA------VHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~ 365 (619)
..+|++.+.||+|+||+||+|... +++.||||+++.. ......+.+|+++++.+ .|+||+++++++.....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 457999999999999999999865 5899999999642 33456788899998877 46799999999999999
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--EEEcccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE--AVVGDFG 443 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfG 443 (619)
.++||||+. ++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecc
Confidence 999999997 588888876432 3389999999999999999999999 9999999999999999887 9999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 248 ~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 248 SSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 99764322 23456899999999999999999999999999999999999999754
No 220
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4e-39 Score=343.69 Aligned_cols=260 Identities=24% Similarity=0.288 Sum_probs=193.3
Q ss_pred cCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCC----C--cc
Q 007073 294 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP----T--ER 366 (619)
Q Consensus 294 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~--~~ 366 (619)
.+|+..+.||+|+||.||+|.+. +|+.||||++.... ..+.+|+++++.++|||||++++++... + ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 46888899999999999999985 68999999986432 1234799999999999999999988432 1 25
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEcccccc
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLA 445 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla 445 (619)
++||||+++ ++.+.+.........+++..+..++.|+++||+|||++ +|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 689999986 55555554333345589999999999999999999999 99999999999999955 67899999999
Q ss_pred eeeccCCcceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE-- 522 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 522 (619)
+....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.........+
T Consensus 205 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~----~~l~~i~~~lg~p~~ 278 (420)
T 1j1b_A 205 KQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV----DQLVEIIKVLGTPTR 278 (420)
T ss_dssp EECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSCCH
T ss_pred hhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCH
Confidence 87643322 2345689999999998765 7899999999999999999999999753211 1112222111100
Q ss_pred -------cccchhccccccC-----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 -------KRLDAIVDRNLNK-----NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 -------~~~~~~~~~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........+.+.. .+....+.++.+|+.+||+.||++|||+.|+++
T Consensus 279 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0000000000000 011223467899999999999999999999984
No 221
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.4e-39 Score=362.10 Aligned_cols=246 Identities=22% Similarity=0.275 Sum_probs=201.7
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcc
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 366 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 366 (619)
...++|++.++||+|+||.||+|... +++.||||++++.. .....+.+..|..++..+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 45578999999999999999999975 68899999986421 223456778899999877 699999999999999999
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceee
Confidence 99999999999999998643 389999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... +....+.
T Consensus 491 ~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~------ 555 (674)
T 3pfq_A 491 ENIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIM------ 555 (674)
T ss_dssp ECCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH------
T ss_pred ccccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--------HHHHHHH------
Confidence 643322 2344567999999999999999999999999999999999999999743211 1111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 563 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 563 (619)
...+ .++...+.++.+|+.+||+.||++||++
T Consensus 556 ---~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 556 ---EHNV--AYPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp ---SSCC--CCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred ---hCCC--CCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 1111 1222344678999999999999999997
No 222
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.2e-38 Score=333.14 Aligned_cols=270 Identities=20% Similarity=0.229 Sum_probs=190.8
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 365 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 365 (619)
.+.....++|.+.+.||+|+||+||+|... +|+.||||++.... .....+.+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP--RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT--TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc--cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 345567789999999999999999999975 68999999986432 223456778888999999999999999865433
Q ss_pred -------ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCcEEeCC-CC
Q 007073 366 -------RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH--EHCNPKIIHRDVKAANVLLDE-DF 435 (619)
Q Consensus 366 -------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--~~~~~~ivH~Dlkp~NIll~~-~~ 435 (619)
.++||||++++ +...+.........+++..+..++.|++.||.||| ++ +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 68999999874 44444433334455888999999999999999999 87 9999999999999996 89
Q ss_pred cEEEcccccceeeccCCcceeeeccccccccccccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007073 436 EAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 514 (619)
Q Consensus 436 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 514 (619)
.+||+|||+++....... .....||+.|+|||.+.+.. ++.++|||||||++|||+||+.||...... ..+..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~ 243 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA----GQLHE 243 (360)
T ss_dssp EEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH
T ss_pred cEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH----HHHHH
Confidence 999999999987654322 33456899999999986654 899999999999999999999999753321 11111
Q ss_pred HHHHHhhh-----------cccchhcc------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 515 HVKKLERE-----------KRLDAIVD------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 515 ~~~~~~~~-----------~~~~~~~~------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........ .......+ ...........+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111000 00000000 00001112224578999999999999999999999985
No 223
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.3e-38 Score=333.36 Aligned_cols=259 Identities=23% Similarity=0.294 Sum_probs=182.3
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCC------C
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------T 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 364 (619)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46789999999999999999996 468999999986532 333457788999999999999999999998654 5
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 578999998 6899888764 2489999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh-
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE- 522 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 522 (619)
++..... .....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... .+.........+
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~l~~i~~~~g~p~ 250 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID----QLKLILRLVGTPG 250 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCC
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCC
Confidence 9865422 334578999999999877 678999999999999999999999997533211 111111110000
Q ss_pred -cccchhccc-------ccc--CCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 -KRLDAIVDR-------NLN--KNYN-----IQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 -~~~~~~~~~-------~l~--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.....+... .+. .... ......+.+|+.+|++.||++|||+.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000000000 000 0000 112357889999999999999999999985
No 224
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=320.59 Aligned_cols=251 Identities=18% Similarity=0.289 Sum_probs=197.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC---CcchHHHHHHHHHHHHHccCCCccceeeeee--CCCcc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE---SPGGDAAFQREVEMISVAVHRNLLRLIGFCT--TPTER 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~ 366 (619)
.++|.+.+.||+|+||.||+|... +++.||+|+++... .......+.+|++++++++||||+++++++. .....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999974 68999999986421 1345678999999999999999999999984 44578
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
++||||++++ +.+.+.... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999987 666665432 23588999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCC-cceeeeccccccccccccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 447 LVDVRK-TNVTTQVRGTMGHIAPEYLSTGK--SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 447 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
...... ........||+.|+|||.+.+.. ++.++||||||+++|||+||+.||..... ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~~~- 228 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--------YKLFENIGKG- 228 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHC-
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--------HHHHHHHhcC-
Confidence 764322 22233456899999999997654 37899999999999999999999974321 1111111111
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 524 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ..+...+..+.+++.+||+.||++|||+.++++
T Consensus 229 ~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 229 SY----------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CC----------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CC----------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 111223457889999999999999999999985
No 225
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.7e-38 Score=330.97 Aligned_cols=260 Identities=19% Similarity=0.235 Sum_probs=191.0
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCC------
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT------ 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 364 (619)
.++|.+.+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367899999999999999999965 68999999987533 2334567889999999999999999999997664
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
..++||||+++ +|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 57999999985 67777642 278889999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH------
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK------ 518 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~------ 518 (619)
++..... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||....... ........
T Consensus 174 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~~ 247 (371)
T 2xrw_A 174 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID----QWNKVIEQLGTPCP 247 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHC-CCCCCH
T ss_pred ccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCH
Confidence 9865432 22334578999999999999999999999999999999999999997533210 00000000
Q ss_pred ------------H-hhhc-----ccchhccccccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 519 ------------L-EREK-----RLDAIVDRNLNKNY---NIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 519 ------------~-~~~~-----~~~~~~~~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. .... ...........+.. .......+.+++.+|++.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 0000 00000000000000 1233578999999999999999999999985
No 226
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=338.82 Aligned_cols=268 Identities=19% Similarity=0.264 Sum_probs=181.7
Q ss_pred cCCcc-cCccccCCCceEEEEEeC---CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeee--CCCcce
Q 007073 294 DNFSE-KNVLGQGGFGKVYRGVLA---DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT--TPTERL 367 (619)
Q Consensus 294 ~~~~~-~~~lg~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~ 367 (619)
+.|++ .++||+|+||+||+|.+. +++.||||++.... ....+.+|++++++++||||+++++++. .....+
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 34555 568999999999999965 57899999986432 2356889999999999999999999994 466789
Q ss_pred eEecccccchhhhhhcccC-----CCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEE
Q 007073 368 LVYPFMQNLSVAYRLREIK-----PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL----DEDFEAV 438 (619)
Q Consensus 368 lv~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~k 438 (619)
+||||+.+ +|.+.+.... .....+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999975 6776665321 1123488999999999999999999999 99999999999999 6778999
Q ss_pred EcccccceeeccCCc--ceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccc-----cch
Q 007073 439 VGDFGLAKLVDVRKT--NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE-----DDV 510 (619)
Q Consensus 439 l~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~-----~~~ 510 (619)
|+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||........ ...
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 252 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHH
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHH
Confidence 999999987653221 223446789999999999874 589999999999999999999999965332110 001
Q ss_pred hHHHHHHHHhhhc--ccchh------------ccccccCCCCH---------HHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 007073 511 LLLDHVKKLEREK--RLDAI------------VDRNLNKNYNI---------QEVETMIQVALLCTQASPEDRPAMSEVV 567 (619)
Q Consensus 511 ~~~~~~~~~~~~~--~~~~~------------~~~~l~~~~~~---------~~~~~l~~l~~~Cl~~dP~~RPs~~evl 567 (619)
.+......+..+. ....+ ........... .....+.+|+.+||+.||++|||++|++
T Consensus 253 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L 332 (405)
T 3rgf_A 253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332 (405)
T ss_dssp HHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 1111111110000 00000 00000000000 0134678999999999999999999998
Q ss_pred H
Q 007073 568 R 568 (619)
Q Consensus 568 ~ 568 (619)
+
T Consensus 333 ~ 333 (405)
T 3rgf_A 333 Q 333 (405)
T ss_dssp T
T ss_pred c
Confidence 5
No 227
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2e-38 Score=322.44 Aligned_cols=253 Identities=21% Similarity=0.277 Sum_probs=203.1
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC--------cchHHHHHHHHHHHHHcc-CCCccceeeeee
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--------PGGDAAFQREVEMISVAV-HRNLLRLIGFCT 361 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~ 361 (619)
..++|.+.+.||+|+||.||+|... +|+.||||.+..... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3568999999999999999999975 689999999864321 112456789999999996 999999999999
Q ss_pred CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcc
Q 007073 362 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGD 441 (619)
Q Consensus 362 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 441 (619)
.....++||||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 999999999999999999999763 2388999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeeecccccccccccccc------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS------TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 515 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 515 (619)
||++....... ......|++.|+|||.+. ...++.++||||||+++|||++|+.||...... ..
T Consensus 168 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~ 237 (298)
T 1phk_A 168 FGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--------LM 237 (298)
T ss_dssp CTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HH
T ss_pred ccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--------HH
Confidence 99998765332 233456899999999885 456899999999999999999999998643211 11
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........ .. .........+..+.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~-~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 238 LRMIMSGN-YQ------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHTC-CC------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHhcCC-cc------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11111110 00 000011233467899999999999999999999875
No 228
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.1e-39 Score=331.91 Aligned_cols=265 Identities=23% Similarity=0.327 Sum_probs=200.2
Q ss_pred HhcCCcccCccccCCCceEEEEEe--CCCcEEEEEEeccCC-CcchHHHHHHHHHHHHHc---cCCCccceeeeee----
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVL--ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVA---VHRNLLRLIGFCT---- 361 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~--~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~---- 361 (619)
..++|++.+.||+|+||.||+|.. .+|+.||+|+++... .......+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 468899999986432 122234566788777766 8999999999987
Q ss_pred -CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEc
Q 007073 362 -TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVG 440 (619)
Q Consensus 362 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 440 (619)
.....++||||++ |+|.+++..... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4567889999998 599998876432 3488999999999999999999999 99999999999999999999999
Q ss_pred ccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh
Q 007073 441 DFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE 520 (619)
Q Consensus 441 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (619)
|||+++...... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ...........
T Consensus 163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~ 236 (326)
T 1blx_A 163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV----DQLGKILDVIG 236 (326)
T ss_dssp SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHC
T ss_pred cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHHHcC
Confidence 999998654322 233456899999999999999999999999999999999999999753321 11111111110
Q ss_pred hhc--cc-ch------hccc---cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 521 REK--RL-DA------IVDR---NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 521 ~~~--~~-~~------~~~~---~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... .. .. .... ..........+..+.+++.+||+.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 00 00 0000 0000112233467889999999999999999999984
No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.4e-38 Score=329.70 Aligned_cols=258 Identities=21% Similarity=0.290 Sum_probs=194.9
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcc----
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER---- 366 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~---- 366 (619)
.++|...+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+.+++.++||||+++++++......
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467888999999999999999965 68999999997543 233457788999999999999999999999877654
Q ss_pred --eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 367 --LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 367 --~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
++||||+. ++|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999998 577776632 288999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
++..... .....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... .+...........
T Consensus 191 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~ 262 (371)
T 4exu_A 191 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD----QLTQILKVTGVPG 262 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCC
T ss_pred ccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCc
Confidence 9865432 334568999999999877 678999999999999999999999997532211 1111111000000
Q ss_pred --ccch--------h---ccccccCC---CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 524 --RLDA--------I---VDRNLNKN---YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 524 --~~~~--------~---~~~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... . ........ ..+..+..+.+++.+|++.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0000 0 00000000 01123467899999999999999999999985
No 230
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.3e-38 Score=338.12 Aligned_cols=252 Identities=22% Similarity=0.279 Sum_probs=187.5
Q ss_pred CCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEeccc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~ 373 (619)
.|...++||+|+||+||.+...+|+.||||++.. ...+.+.+|+++++++ +||||+++++++......++||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~----~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI----DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEG----GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcH----HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 4555688999999999877667899999999863 2345678999999876 8999999999999999999999999
Q ss_pred ccchhhhhhcccCCCCCC---cCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-------------CcE
Q 007073 374 QNLSVAYRLREIKPGEPV---LDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-------------FEA 437 (619)
Q Consensus 374 ~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-------------~~~ 437 (619)
. |+|.+++......... .++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 6999999764332211 13334578999999999999999 99999999999999653 589
Q ss_pred EEcccccceeeccCCcc---eeeeccccccccccccccC-------CCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccc
Q 007073 438 VVGDFGLAKLVDVRKTN---VTTQVRGTMGHIAPEYLST-------GKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEE 506 (619)
Q Consensus 438 kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~ 506 (619)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 99999999977543322 1234579999999999965 678999999999999999999 999986432110
Q ss_pred ccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 507 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
..... ..... +..........+.++.+++.+||+.||++|||+.++++
T Consensus 248 ------~~i~~---~~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 ------SNIIR---GIFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp ------HHHHH---TCCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------HHHhc---CCCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 00100 00000 11111224566788999999999999999999999985
No 231
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6.4e-38 Score=324.32 Aligned_cols=259 Identities=20% Similarity=0.262 Sum_probs=202.1
Q ss_pred hcCCcccCccccCCCceEEEEEe--CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCC------ccceeeeeeCCC
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL--ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN------LLRLIGFCTTPT 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~ 364 (619)
.++|++.+.||+|+||+||+|.. .+|+.||||+++.. ....+.+.+|+++++.++|++ ++++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 46899999999999999999996 36889999998642 334577889999999887765 999999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-----------
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE----------- 433 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~----------- 433 (619)
..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred cEEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcc
Confidence 999999999 889999887643 23488999999999999999999999 9999999999999987
Q ss_pred --------CCcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccc
Q 007073 434 --------DFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLE 505 (619)
Q Consensus 434 --------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~ 505 (619)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred ccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999864332 23456899999999999999999999999999999999999999753321
Q ss_pred cccchhHHHHHHHHhhhc--------ccch---------------------hcccc-ccCCCCHHHHHHHHHHHHhccCC
Q 007073 506 EEDDVLLLDHVKKLEREK--------RLDA---------------------IVDRN-LNKNYNIQEVETMIQVALLCTQA 555 (619)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~--------~~~~---------------------~~~~~-l~~~~~~~~~~~l~~l~~~Cl~~ 555 (619)
. ............ .... ...+. -........+..+.+++.+||+.
T Consensus 241 ~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 315 (339)
T 1z57_A 241 E-----HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY 315 (339)
T ss_dssp H-----HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred H-----HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCc
Confidence 1 111111110000 0000 00000 00111335567899999999999
Q ss_pred CCCCCCCHHHHHH
Q 007073 556 SPEDRPAMSEVVR 568 (619)
Q Consensus 556 dP~~RPs~~evl~ 568 (619)
||++|||+.|+++
T Consensus 316 dP~~Rpt~~ell~ 328 (339)
T 1z57_A 316 DPAKRITLREALK 328 (339)
T ss_dssp STTTSCCHHHHTT
T ss_pred CcccccCHHHHhc
Confidence 9999999999874
No 232
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.5e-38 Score=328.06 Aligned_cols=256 Identities=22% Similarity=0.333 Sum_probs=180.5
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHH-HHHHccCCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVE-MISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
..++|...+.||+|+||.||+|... +|+.||||++...........+..|+. +++.++||||+++++++..++..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 3478889999999999999999975 789999999976544445556666776 66778999999999999999999999
Q ss_pred ecccccchhhhhhccc-CCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 370 YPFMQNLSVAYRLREI-KPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
|||+++ +|.+++... ......+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 999986 777666532 112345889999999999999999999852 7999999999999999999999999999866
Q ss_pred ccCCcceeeeccccccccccccc----cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 449 DVRKTNVTTQVRGTMGHIAPEYL----STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 449 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
.... ......||+.|+|||.+ .+..++.++||||||+++|||+||+.||........ .
T Consensus 177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----------------~ 238 (327)
T 3aln_A 177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----------------Q 238 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------------------
T ss_pred cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----------------H
Confidence 4322 22334689999999998 456789999999999999999999999964221100 0
Q ss_pred cchhcc---ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVD---RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~---~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
+..+.. +.+........+..+.+++.+||+.||++|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 239 LTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 001111 01111111223467899999999999999999999975
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.1e-38 Score=321.32 Aligned_cols=251 Identities=23% Similarity=0.363 Sum_probs=192.2
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC---------
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT--------- 362 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------- 362 (619)
.++|++.+.||+|+||.||+|... +|+.||||++.. .....+.+.+|+.++++++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH--TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE--EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec--cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 467899999999999999999974 799999999853 23345778999999999999999999998754
Q ss_pred ----CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007073 363 ----PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 438 (619)
Q Consensus 363 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 438 (619)
....++||||+++|+|.+++... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 34578999999999999999753 23477888999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCC-------------cceeeeccccccccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCcc
Q 007073 439 VGDFGLAKLVDVRK-------------TNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRL 504 (619)
Q Consensus 439 l~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~ 504 (619)
|+|||+++...... ........||+.|+|||.+.+. .++.++||||||+++|||+| ||....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~- 232 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM- 232 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-
Confidence 99999998654221 1122345689999999999764 68999999999999999998 443211
Q ss_pred ccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 505 EEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. ........... ............+..+.+++.+||+.||++|||+.++++
T Consensus 233 ---~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 ---E---RVNILKKLRSV-------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp ---H---HHHHHHHHHST-------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---h---HHHHHHhcccc-------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 0 01111111110 111112233344567899999999999999999999986
No 234
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7.4e-38 Score=328.76 Aligned_cols=265 Identities=19% Similarity=0.274 Sum_probs=199.8
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-----------CCCccceeeee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-----------HRNLLRLIGFC 360 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~ 360 (619)
.++|.+.+.||+|+||+||+|.. .+|+.||||++.. .....+.+.+|+++++++. |+||+++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG--DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC--CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 46799999999999999999996 4789999999863 2334567889999998876 89999999998
Q ss_pred eCCC----cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC----
Q 007073 361 TTPT----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD---- 432 (619)
Q Consensus 361 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---- 432 (619)
.... ..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+++ +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 7543 678999999 8899999976433 33889999999999999999999953 899999999999994
Q ss_pred --CCCcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccc--c
Q 007073 433 --EDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE--D 508 (619)
Q Consensus 433 --~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~--~ 508 (619)
..+.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||+||+.||........ .
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4558999999999876432 2334689999999999999999999999999999999999999975432111 0
Q ss_pred chhHHHHHHHHhhh--------cccchhccc-------------------cccCCCCHHHHHHHHHHHHhccCCCCCCCC
Q 007073 509 DVLLLDHVKKLERE--------KRLDAIVDR-------------------NLNKNYNIQEVETMIQVALLCTQASPEDRP 561 (619)
Q Consensus 509 ~~~~~~~~~~~~~~--------~~~~~~~~~-------------------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 561 (619)
...+.......... .......+. .-...++...+..+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 11111111110000 000000000 001124567788999999999999999999
Q ss_pred CHHHHHH
Q 007073 562 AMSEVVR 568 (619)
Q Consensus 562 s~~evl~ 568 (619)
|+.|+++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999985
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.7e-38 Score=315.78 Aligned_cols=252 Identities=22% Similarity=0.298 Sum_probs=201.9
Q ss_pred HhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
..++|.+.+.||+|+||.||+|... +++.||||++.... .......+.+|++++++++||||+++++++......++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4568999999999999999999975 78999999986432 234567899999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEEcccccce
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED---FEAVVGDFGLAK 446 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGla~ 446 (619)
+||+++++|.+.+.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.+ +.+||+|||++.
T Consensus 100 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 99999999998887543 388999999999999999999999 99999999999999754 479999999998
Q ss_pred eeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccc
Q 007073 447 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 526 (619)
Q Consensus 447 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (619)
...... ......||+.|+|||.+.+ .++.++||||||+++|+|+||+.||...... +......... ..
T Consensus 173 ~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~-~~ 240 (287)
T 2wei_A 173 CFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGK-YA 240 (287)
T ss_dssp TBCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCC-CC
T ss_pred eecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCC-CC
Confidence 654322 1233458999999998865 5899999999999999999999998643211 1111111111 00
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 527 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 527 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. +.. .....+..+.+++.+||+.||++|||+.++++
T Consensus 241 ~--~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 F--DLP----QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp C--CSG----GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred C--Cch----hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0 000 00122357899999999999999999999986
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=323.38 Aligned_cols=257 Identities=21% Similarity=0.297 Sum_probs=195.4
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc-----
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE----- 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 365 (619)
.++|...+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357888999999999999999975 68999999997543 23345678899999999999999999999987654
Q ss_pred -ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007073 366 -RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 444 (619)
Q Consensus 366 -~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 444 (619)
.++||||+. ++|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999998 588777642 288999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh-
Q 007073 445 AKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE- 522 (619)
Q Consensus 445 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 522 (619)
++..... .....||+.|+|||.+.+ ..++.++||||||+++|||+||+.||....... .+.........+
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~ 244 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD----QLTQILKVTGVPG 244 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH----HHHHHHHHHCBCC
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCC
Confidence 9865322 234568999999999877 678999999999999999999999997533211 111111100000
Q ss_pred -ccc------------chhc---cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 -KRL------------DAIV---DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 -~~~------------~~~~---~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
... ..+. ...+ .......+..+.+++.+|++.||++|||+.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 0000 0000 0112234568899999999999999999999985
No 237
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.6e-38 Score=321.67 Aligned_cols=262 Identities=21% Similarity=0.306 Sum_probs=191.1
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeee----------
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT---------- 361 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~---------- 361 (619)
.++|.+.+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT-DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 467889999999999999999976 5899999998643 3445678899999999999999999999874
Q ss_pred ----CCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCc
Q 007073 362 ----TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-EDFE 436 (619)
Q Consensus 362 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~ 436 (619)
.....++||||++ |+|.+++.. ..++...+..++.|++.||+|||++ +|+||||||+||+++ +++.
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCe
Confidence 3356789999998 699988864 2378899999999999999999999 999999999999997 5679
Q ss_pred EEEcccccceeeccCCc--ceeeeccccccccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH
Q 007073 437 AVVGDFGLAKLVDVRKT--NVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 437 ~kl~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 513 (619)
+||+|||+++....... .......+|..|+|||.+.+ ..++.++||||||+++|||+||+.||........ ..
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~----~~ 235 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ----MQ 235 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HH
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH----HH
Confidence 99999999987643221 12233457899999998865 6789999999999999999999999975432110 00
Q ss_pred HHHHHHhh---------hcccchhcccccc-CC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 514 DHVKKLER---------EKRLDAIVDRNLN-KN-----YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 514 ~~~~~~~~---------~~~~~~~~~~~l~-~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
........ ............. .. .....+..+.+++.+||+.||++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 01100000 0000000000000 00 01123467899999999999999999999985
No 238
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.2e-37 Score=326.47 Aligned_cols=202 Identities=21% Similarity=0.237 Sum_probs=170.9
Q ss_pred HHhcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CC-----CccceeeeeeCC
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HR-----NLLRLIGFCTTP 363 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~ 363 (619)
...++|.+.+.||+|+||+||+|... +|+.||||+++.. ......+..|+.+++.++ |+ +|+++++++...
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 34578999999999999999999975 6889999999632 334567788999988885 45 499999999999
Q ss_pred CcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC--CCCcEEEcc
Q 007073 364 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD--EDFEAVVGD 441 (619)
Q Consensus 364 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~D 441 (619)
+..++||||+++ +|.+++..... ..+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+|
T Consensus 129 ~~~~lv~e~~~~-~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 NHLCLVFEMLSY-NLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TEEEEEEECCCC-BHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CceEEEEecCCC-CHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 999999999964 99998876432 3388999999999999999999952 12899999999999994 578899999
Q ss_pred cccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007073 442 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 502 (619)
Q Consensus 442 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~ 502 (619)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 205 FG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 205 FGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999876432 23456899999999999999999999999999999999999999753
No 239
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.1e-39 Score=329.99 Aligned_cols=247 Identities=22% Similarity=0.367 Sum_probs=199.0
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCc-----chHHHHHHHHHHHHHcc--CCCccceee
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESP-----GGDAAFQREVEMISVAV--HRNLLRLIG 358 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-----~~~~~~~~E~~~l~~l~--H~niv~l~~ 358 (619)
.+.+...++|.+.+.||+|+||.||+|.. .+|+.||||++...... .....+.+|+.++++++ |+||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 34445667899999999999999999996 47899999998643221 12345678999999996 599999999
Q ss_pred eeeCCCcceeEeccccc-chhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCc
Q 007073 359 FCTTPTERLLVYPFMQN-LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-EDFE 436 (619)
Q Consensus 359 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~ 436 (619)
++..++..++|+|++.+ ++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 188 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGE 188 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTE
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCC
Confidence 99999999999999986 89999987632 388999999999999999999999 999999999999999 7899
Q ss_pred EEEcccccceeeccCCcceeeeccccccccccccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007073 437 AVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 515 (619)
Q Consensus 437 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 515 (619)
+||+|||+++..... ......||+.|+|||.+.+..+ +.++||||||+++|||+||+.||.....
T Consensus 189 ~kL~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----------- 254 (320)
T 3a99_A 189 LKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------- 254 (320)
T ss_dssp EEECCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----------
T ss_pred EEEeeCccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----------
Confidence 999999999876532 2234568999999999987766 7889999999999999999999863210
Q ss_pred HHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 516 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.... .. . .....+..+.+++.+||+.||++|||+.++++
T Consensus 255 ---~~~~-~~--~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 255 ---IIRG-QV--F--------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ---HHHC-CC--C--------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---hhcc-cc--c--------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00 0 11122357889999999999999999999986
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.3e-38 Score=320.21 Aligned_cols=247 Identities=22% Similarity=0.327 Sum_probs=191.2
Q ss_pred HHHHHHhcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCc-----chHHHHHHHHHHHHHc----cCCCccce
Q 007073 287 RELQLATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESP-----GGDAAFQREVEMISVA----VHRNLLRL 356 (619)
Q Consensus 287 ~el~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-----~~~~~~~~E~~~l~~l----~H~niv~l 356 (619)
.+.+...++|.+.+.||+|+||.||+|.. .+|+.||||++...... .....+.+|+.++.++ +||||+++
T Consensus 24 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~ 103 (312)
T 2iwi_A 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL 103 (312)
T ss_dssp ---------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred cchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence 34455678899999999999999999996 47899999998643321 1233456799999988 89999999
Q ss_pred eeeeeCCCcceeEecc-cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CC
Q 007073 357 IGFCTTPTERLLVYPF-MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-ED 434 (619)
Q Consensus 357 ~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~ 434 (619)
++++...+..++|+|| +.+++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++ .+
T Consensus 104 ~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 176 (312)
T 2iwi_A 104 LDWFETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRR 176 (312)
T ss_dssp EEEC-----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTT
T ss_pred EEEEecCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCC
Confidence 9999999999999999 78999999997643 389999999999999999999999 999999999999999 88
Q ss_pred CcEEEcccccceeeccCCcceeeeccccccccccccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH
Q 007073 435 FEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS-ERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL 513 (619)
Q Consensus 435 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 513 (619)
+.+||+|||+++...... .....||..|+|||.+.+..+. .++||||||+++|||+||+.||.....
T Consensus 177 ~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------- 244 (312)
T 2iwi_A 177 GCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--------- 244 (312)
T ss_dssp TEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH---------
T ss_pred CeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH---------
Confidence 999999999998765432 2345689999999999877764 589999999999999999999863210
Q ss_pred HHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 514 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
. .. .. ..........+.+++.+||+.||++|||+.|+++
T Consensus 245 -~---~~--~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 245 -I---LE--AE----------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -H---HH--TC----------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -H---hh--hc----------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00 00 0111223457889999999999999999999986
No 241
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=7.4e-38 Score=324.11 Aligned_cols=253 Identities=21% Similarity=0.255 Sum_probs=173.2
Q ss_pred HhcCCccc-CccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC----CCc
Q 007073 292 ATDNFSEK-NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT----PTE 365 (619)
Q Consensus 292 ~~~~~~~~-~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~ 365 (619)
..++|.+. ++||+|+||+||+|... +|+.||||++... .....+....++.+.||||+++++++.. ...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 45678875 46999999999999976 6899999998642 1222223334677899999999999865 344
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDF 442 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Df 442 (619)
.++||||+++|+|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+||+++. ++.+||+||
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 789999999999999998643 24589999999999999999999999 9999999999999976 456999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
|+++..... ......||+.|+|||.+.+..++.++||||||+++|+|+||+.||.......... ....... .
T Consensus 176 g~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~~~-~ 247 (336)
T 3fhr_A 176 GFAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP----GMKRRIR-L 247 (336)
T ss_dssp TTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred ccceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh----hHHHhhh-c
Confidence 999865432 2234568999999999988889999999999999999999999996432211100 0000000 0
Q ss_pred cccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 523 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ...........+..+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 248 GQ------YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ---------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cc------cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 00000111233467899999999999999999999996
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=315.74 Aligned_cols=252 Identities=21% Similarity=0.321 Sum_probs=178.7
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHH-HHHHHHHHHccCCCccceeeeeeCCCcceeEe
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAF-QREVEMISVAVHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~-~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 370 (619)
.++|+..+.||+|+||.||+|.+. +|+.||||++...........+ .++..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999975 7899999999754433333334 44455678889999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
||+ ++.+....... ...+++..+..++.|+++||.|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 104 e~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 44554444332 2348899999999999999999998 6 89999999999999999999999999997654
Q ss_pred cCCcceeeecccccccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 524 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (619)
... ......||+.|+|||.+. ...++.++||||||+++|||+||+.||...... . ...........
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~---~~~~~~~~~~~ 247 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD----F---EVLTKVLQEEP 247 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH----H---HHHHHHHHSCC
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc----H---HHHHHHhccCC
Confidence 322 223446899999999984 556899999999999999999999999642211 1 11111111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 525 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 525 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
.. ... ....+..+.+++.+||+.||++||++.++++
T Consensus 248 -~~-----~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 -PL-----LPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -CC-----CCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -CC-----CCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00 000 1122357889999999999999999999985
No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.4e-37 Score=320.28 Aligned_cols=259 Identities=18% Similarity=0.230 Sum_probs=197.9
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CC-cEEEEEEeccCCCcchHHHHHHHHHHHHHccCCC------ccceeeeeeCCC
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DG-TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN------LLRLIGFCTTPT 364 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~ 364 (619)
.++|.+.+.||+|+||+||+|... ++ +.||+|+++.. ....+.+.+|+.++++++|++ ++.+++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 468999999999999999999974 34 68999998632 344577889999999998766 899999999999
Q ss_pred cceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe-------------
Q 007073 365 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL------------- 431 (619)
Q Consensus 365 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll------------- 431 (619)
..++||||+ ++++.+.+.... ...+++..+..++.|++.||+|||++ +|+||||||+|||+
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred eEEEEEecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 999999999 456666665432 23488999999999999999999999 99999999999999
Q ss_pred ------CCCCcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccc
Q 007073 432 ------DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLE 505 (619)
Q Consensus 432 ------~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~ 505 (619)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999864332 23456899999999999999999999999999999999999999753321
Q ss_pred cccchhHHHHHHHHhhhc---------ccchhccc---------------------cccCCCCHHHHHHHHHHHHhccCC
Q 007073 506 EEDDVLLLDHVKKLEREK---------RLDAIVDR---------------------NLNKNYNIQEVETMIQVALLCTQA 555 (619)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~---------------------~l~~~~~~~~~~~l~~l~~~Cl~~ 555 (619)
. ............ ........ .............+.+++.+||+.
T Consensus 246 ~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 320 (355)
T 2eu9_A 246 E-----HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEF 320 (355)
T ss_dssp H-----HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred H-----HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcC
Confidence 1 111111110000 00000000 000011234456899999999999
Q ss_pred CCCCCCCHHHHHH
Q 007073 556 SPEDRPAMSEVVR 568 (619)
Q Consensus 556 dP~~RPs~~evl~ 568 (619)
||++|||+.|+++
T Consensus 321 dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 321 DPAQRITLAEALL 333 (355)
T ss_dssp STTTSCCHHHHTT
T ss_pred ChhhCcCHHHHhc
Confidence 9999999999874
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=332.21 Aligned_cols=250 Identities=24% Similarity=0.312 Sum_probs=186.1
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeEe
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 370 (619)
...+|...++||+|+||+||.....+|+.||||++.... ...+.+|+++++++ +|||||++++++......++||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC----FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT----EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 445688899999999999665555679999999986432 12356899999999 7999999999999999999999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-----CCcEEEcccccc
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-----DFEAVVGDFGLA 445 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfGla 445 (619)
||+. |+|.+++..... .........++.|++.||+|||++ +|+||||||+|||++. ...+||+|||++
T Consensus 98 E~~~-g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDF---AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp ECCS-EEHHHHHHSSSC---CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred ECCC-CCHHHHHHhcCC---CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 9997 599998876432 233445678999999999999999 9999999999999953 346889999999
Q ss_pred eeeccCCc--ceeeecccccccccccccc---CCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHH
Q 007073 446 KLVDVRKT--NVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKL 519 (619)
Q Consensus 446 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 519 (619)
+....... .......||+.|+|||++. ...++.++|||||||++|||+| |..||...... .....
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---------~~~~~ 241 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---------QANIL 241 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---------HHHHH
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---------HHHHH
Confidence 87653322 2234467999999999997 4567889999999999999999 88888532110 00111
Q ss_pred hhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 520 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
...... . . ..........+.+++.+||+.||++|||+.++++
T Consensus 242 ~~~~~~-~----~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 242 LGACSL-D----C--LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTCCCC-T----T--SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccCCc-c----c--cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 100000 0 0 0112344556889999999999999999999984
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=6.8e-38 Score=345.71 Aligned_cols=260 Identities=22% Similarity=0.260 Sum_probs=199.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeC------CCc
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT------PTE 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~ 365 (619)
.++|.+.+.||+|+||+||+|.+. +|+.||||+++........+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999974 6899999998765555567789999999999999999999998765 667
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVGDF 442 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Df 442 (619)
.++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999986432 23488889999999999999999999 9999999999999986654 999999
Q ss_pred ccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007073 443 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 522 (619)
Q Consensus 443 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 522 (619)
|++....... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||....... .|.......
T Consensus 169 G~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~-------~~~~~i~~~ 239 (676)
T 3qa8_A 169 GYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV-------QWHGKVREK 239 (676)
T ss_dssp CCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH-------HSSTTCC--
T ss_pred cccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh-------hhhhhhhcc
Confidence 9998764332 2344579999999999999999999999999999999999999996432110 000000000
Q ss_pred cc----cchhccc--------cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 007073 523 KR----LDAIVDR--------NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSE 565 (619)
Q Consensus 523 ~~----~~~~~~~--------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 565 (619)
.. ....... ..........+..+.+++..|++.||++|||+.+
T Consensus 240 ~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 240 SNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp ----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred cchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 00 0000000 0011234556788999999999999999999966
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-37 Score=348.59 Aligned_cols=239 Identities=20% Similarity=0.303 Sum_probs=194.4
Q ss_pred hcCCcccCccccCCCceEEEEEeC--CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCccceeeeeeCCCc-----
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA--DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE----- 365 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~--~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 365 (619)
.++|.+.+.||+|+||+||+|.+. +|+.||||++...........+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999975 6899999998765555566788999999999999999999999987665
Q ss_pred ceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007073 366 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 445 (619)
Q Consensus 366 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 445 (619)
.++||||+++++|.+++.. .+++..+..++.|++.||.|||++ +|+||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 6999999999999887653 489999999999999999999999 99999999999999986 8999999999
Q ss_pred eeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007073 446 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 525 (619)
Q Consensus 446 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (619)
+..... ....||+.|+|||++.++. +.++|||||||++|||++|..|+........
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~------------------ 284 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL------------------ 284 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC------------------
T ss_pred hhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc------------------
Confidence 876432 3456999999999987654 8999999999999999999888753211100
Q ss_pred chhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHHhc
Q 007073 526 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA-MSEVVRMLEG 572 (619)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~~ 572 (619)
. ...........+.+++.+||+.||++||+ ++++.+.|.+
T Consensus 285 ---~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 285 ---P----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ---C----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ---c----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 00001123357889999999999999995 6666666654
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.4e-36 Score=302.72 Aligned_cols=231 Identities=11% Similarity=0.026 Sum_probs=183.6
Q ss_pred hcCCcccCccccCCCceEEEEEeC-CCcEEEEEEeccCCC--cchHHHHHHHHHHHHHccCCCccceeeeeeCCCcceeE
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 369 (619)
.++|.+.+.||+|+||.||+|.+. +|+.||||++..... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999975 589999999975433 23347899999999999999999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||+++++|.+++... .......+++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 9999999999998541 24446788999999999999999 99999999999999999999998543
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhc
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 529 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (619)
|++ .++.++|||||||++|||+||+.||........... .....
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--------------~~~~~ 218 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--------------AERDT 218 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--------------CCBCT
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--------------HHHHh
Confidence 333 368999999999999999999999975432211000 00000
Q ss_pred ccccc--CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc
Q 007073 530 DRNLN--KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGL 575 (619)
Q Consensus 530 ~~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 575 (619)
..... .......+..+.+++.+||+.||++| |+.|+++.|+....
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 219 AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00000 00011234578999999999999999 99999999988543
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-36 Score=321.48 Aligned_cols=244 Identities=15% Similarity=0.100 Sum_probs=181.1
Q ss_pred hcCCcccCccccCCCceEEEEEe-CCCcEEEEEEeccCCCc--chHHHHHHHHHHHHHccC-CCcccee---------ee
Q 007073 293 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESP--GGDAAFQREVEMISVAVH-RNLLRLI---------GF 359 (619)
Q Consensus 293 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~~~~~E~~~l~~l~H-~niv~l~---------~~ 359 (619)
...|...++||+|+||+||+|.+ .+|+.||||++...... ...+.|.+|+.+++.++| +|..... ..
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34577788999999999999995 47999999998733322 235778999999999987 3222111 11
Q ss_pred e------------eC-----CCcceeEecccccchhhhhhccc---CCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 007073 360 C------------TT-----PTERLLVYPFMQNLSVAYRLREI---KPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 419 (619)
Q Consensus 360 ~------------~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 419 (619)
. .. ....+++|++ .+++|.+++... ......+++..+..++.|+++||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 1 11 1123455554 467888888532 23345588889999999999999999999 99
Q ss_pred EecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeeccccccccccccc----------cCCCCCcchhhHHHHHHH
Q 007073 420 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL----------STGKSSERTDVFGYGIML 489 (619)
Q Consensus 420 vH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~S~Gv~l 489 (619)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999865432 344567 999999999 555688999999999999
Q ss_pred HHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccchhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 490 LELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 490 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
|||+||+.||........ ...++... . ..+..+.+++.+||+.||++||++.++++
T Consensus 308 ~elltg~~Pf~~~~~~~~-----------------~~~~~~~~--~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG-----------------SEWIFRSC--K----NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC-----------------SGGGGSSC--C----CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchhhh-----------------HHHHHhhc--c----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999999975332111 11111111 1 12357899999999999999999888864
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8e-35 Score=296.23 Aligned_cols=226 Identities=21% Similarity=0.277 Sum_probs=177.6
Q ss_pred cCCccc-CccccCCCceEEEEEe-CCCcEEEEEEeccCCCcchHHHHHHHHHHH-HHccCCCccceeeeeeC----CCcc
Q 007073 294 DNFSEK-NVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMI-SVAVHRNLLRLIGFCTT----PTER 366 (619)
Q Consensus 294 ~~~~~~-~~lg~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~ 366 (619)
++|.+. +.||+|+||.||+|.. .+|+.||+|++.. ...+.+|++++ +..+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 456665 7899999999999997 4789999999863 24567889887 66689999999999876 5678
Q ss_pred eeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEcccc
Q 007073 367 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFG 443 (619)
Q Consensus 367 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG 443 (619)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 99999999999999998643 23589999999999999999999999 9999999999999998 7899999999
Q ss_pred cceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007073 444 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 523 (619)
Q Consensus 444 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (619)
++.... +..++.++|||||||++|||+||+.||......... ..
T Consensus 166 ~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-------------~~ 209 (299)
T 3m2w_A 166 FAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------------PG 209 (299)
T ss_dssp TCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CC
T ss_pred cccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-------------HH
Confidence 987432 234678999999999999999999999643211100 00
Q ss_pred ccchhccccccCCCC----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007073 524 RLDAIVDRNLNKNYN----IQEVETMIQVALLCTQASPEDRPAMSEVVR 568 (619)
Q Consensus 524 ~~~~~~~~~l~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 568 (619)
....+..... ..+ ...+..+.+++.+||+.||++|||+.|+++
T Consensus 210 ~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 210 MKTRIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SCCSSCTTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhhccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000000000 011 123467899999999999999999999986
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.1e-36 Score=311.02 Aligned_cols=243 Identities=15% Similarity=0.120 Sum_probs=183.8
Q ss_pred HhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-------CcchHHHHHHHHHHHHHcc---------CCCccc
Q 007073 292 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-------SPGGDAAFQREVEMISVAV---------HRNLLR 355 (619)
Q Consensus 292 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-------~~~~~~~~~~E~~~l~~l~---------H~niv~ 355 (619)
..++|++.+.||+|+||+||+|++ +|+.||||++.... .....+.+.+|+.+++.++ ||||++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 346788899999999999999998 68999999997542 2334578899999999886 666666
Q ss_pred eeee-----------------eeC-------------CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHH
Q 007073 356 LIGF-----------------CTT-------------PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 405 (619)
Q Consensus 356 l~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia 405 (619)
+.++ +.. ....++||||+++|++.+.+.. ..+++..+..++.|++
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence 5554 332 6788999999999977776643 3378999999999999
Q ss_pred HHHHHHH-hcCCCCeEecCCCCCcEEeCCCC--------------------cEEEcccccceeeccCCcceeeecccccc
Q 007073 406 RGLEYLH-EHCNPKIIHRDVKAANVLLDEDF--------------------EAVVGDFGLAKLVDVRKTNVTTQVRGTMG 464 (619)
Q Consensus 406 ~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~ 464 (619)
.||+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 89 999999999999999887 8999999999876532 3369999
Q ss_pred ccccccccCCCCCcchhhHHHHHH-HHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcccch-hccccccCCCCHHHH
Q 007073 465 HIAPEYLSTGKSSERTDVFGYGIM-LLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA-IVDRNLNKNYNIQEV 542 (619)
Q Consensus 465 y~aPE~~~~~~~~~~~Dv~S~Gv~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~ 542 (619)
|+|||.+.+.. +.++||||+|++ .+++++|..||... .|....... .... ..............+
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s 309 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-----------LWLHYLTDK-MLKQMTFKTKCNTPAMKQIK 309 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-----------HHHHHHHHH-HHHTCCCSSCCCSHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-----------hhhhHHHHh-hhhhhccCcccchhhhhhcC
Confidence 99999998666 899999998777 77888898887310 111111000 0000 001111111234567
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHH
Q 007073 543 ETMIQVALLCTQASPEDRPAMSEVV 567 (619)
Q Consensus 543 ~~l~~l~~~Cl~~dP~~RPs~~evl 567 (619)
.++.+++.+||+.| |++|++
T Consensus 310 ~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 310 RKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHHHhccC-----CHHHHH
Confidence 88999999999966 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.7e-29 Score=278.20 Aligned_cols=186 Identities=14% Similarity=0.045 Sum_probs=129.9
Q ss_pred ccccCCCceEEEEE-eCCCcEEEEEEeccCCC---------cchHHHHHHHHHHHHHc-cCCCccceeeeeeCCCcceeE
Q 007073 301 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFES---------PGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 301 ~lg~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~---------~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 369 (619)
..+.|++|.+..+. .-.|+.||||.+..... ....++|.+|+++|+++ .|+||+++++++.++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 34566666666554 23589999999864321 12345799999999999 699999999999999999999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 449 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 449 (619)
|||++|++|.+.+.... .++. .+|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~~~----~l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE----EIDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHTTC----CCCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHhCC----CCCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 99999999999998643 2444 35899999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCC
Q 007073 450 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRA 498 (619)
Q Consensus 450 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p 498 (619)
.... .....+||+.|||||.+.+ .+..++|+||+|++++++.++..+
T Consensus 391 ~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 4322 2345679999999999865 567789999999998887665444
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=6.6e-27 Score=256.13 Aligned_cols=186 Identities=15% Similarity=0.188 Sum_probs=146.7
Q ss_pred CcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcc-------hHHHHHHHHHHHHHccCCCccceeeeeeCCCccee
Q 007073 296 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG-------GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 368 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 368 (619)
+...++||+|+||.||+|.. .++.+|+|+........ ..+.+.+|++++++++||||+++..++...+..++
T Consensus 338 ~~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 338 KIPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ----------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 34567999999999999965 57889999875422111 13458999999999999999977777777788899
Q ss_pred EecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 369 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 369 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++..
T Consensus 417 VmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 417 MMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 9999999999999875 457899999999999999 9999999999999999 9999999999987
Q ss_pred ccCCcce------eeeccccccccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCC
Q 007073 449 DVRKTNV------TTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAI 499 (619)
Q Consensus 449 ~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~elltg~~p~ 499 (619)
....... .....||+.|||||++.. ..|+..+|+||..+-..+.+.++.+|
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 5432211 235679999999999976 56888899999999988888877665
No 253
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.92 E-value=6.5e-26 Score=231.88 Aligned_cols=171 Identities=30% Similarity=0.559 Sum_probs=157.6
Q ss_pred chhHHHHHHHHHhcCCCCCCCCCCCCCCCCCCC--cceeEEcCC---CCeEEEEeCCCCccc--cCCccccCCCCCCEEE
Q 007073 34 SLSGDALFALRTSLRVPNNQLRDWNQNQVNPCT--WSNVICDNS---NNVASVTLSSMNFSG--TLSPRIGVLRTLSTLT 106 (619)
Q Consensus 34 ~~~~~al~~~k~~l~~~~~~l~~w~~~~~~~c~--w~gv~c~~~---~~l~~L~L~~n~l~~--~~~~~~~~l~~L~~L~ 106 (619)
..|.+||++||+++.+|. .+.+|.. +.+||. |.||+|+.. .+|+.|+|++|++++ .+|..|..+++|++|+
T Consensus 5 ~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~ 82 (313)
T 1ogq_A 5 PQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLY 82 (313)
T ss_dssp HHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEE
T ss_pred HHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeee
Confidence 568999999999998886 7899976 468998 999999864 699999999999999 8999999999999999
Q ss_pred ccC-CCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCccc
Q 007073 107 LKG-NGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLS 185 (619)
Q Consensus 107 L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 185 (619)
|++ |.+++.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|..+..+++|+.|++++|+++
T Consensus 83 L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 162 (313)
T 1ogq_A 83 IGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162 (313)
T ss_dssp EEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCE
T ss_pred CCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCccc
Confidence 995 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccc----cCccccCCCCCC
Q 007073 186 GQIPVHLFQ----IPKYNFTGNNLN 206 (619)
Q Consensus 186 ~~~p~~l~~----l~~l~~~~n~~~ 206 (619)
+.+|..+.+ +..|++++|...
T Consensus 163 ~~~p~~l~~l~~~L~~L~L~~N~l~ 187 (313)
T 1ogq_A 163 GAIPDSYGSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp EECCGGGGCCCTTCCEEECCSSEEE
T ss_pred CcCCHHHhhhhhcCcEEECcCCeee
Confidence 999987764 456788888753
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.4e-23 Score=210.89 Aligned_cols=152 Identities=13% Similarity=0.038 Sum_probs=122.4
Q ss_pred HHHHHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCc-----------------chHHHHHHHHHHHHHccC
Q 007073 288 ELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESP-----------------GGDAAFQREVEMISVAVH 350 (619)
Q Consensus 288 el~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-----------------~~~~~~~~E~~~l~~l~H 350 (619)
.+......|.+.+.||+|+||.||+|.+.+|+.||||.++..... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 444455567778999999999999999977999999998642211 13467899999999999
Q ss_pred CCccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007073 351 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 430 (619)
Q Consensus 351 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 430 (619)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 5 666665543 56799999999999988 421 12346999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCcceeeecccccccccccccc
Q 007073 431 LDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS 472 (619)
Q Consensus 431 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 472 (619)
++ ++.+||+|||+|+ .+..|+|||++.
T Consensus 226 l~-~~~vkl~DFG~a~--------------~~~~~~a~e~l~ 252 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSV--------------EVGEEGWREILE 252 (282)
T ss_dssp EE-TTEEEECCCTTCE--------------ETTSTTHHHHHH
T ss_pred EE-CCcEEEEECCCCe--------------ECCCCCHHHHHH
Confidence 99 9999999999996 345688999874
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=6.1e-23 Score=234.96 Aligned_cols=168 Identities=24% Similarity=0.313 Sum_probs=151.1
Q ss_pred chhHHHHHHHHHhcCCCCCCCCCCCCCC----CCC--CCc------------ceeEEcCCCCeEEEEeCCCCccccCCcc
Q 007073 34 SLSGDALFALRTSLRVPNNQLRDWNQNQ----VNP--CTW------------SNVICDNSNNVASVTLSSMNFSGTLSPR 95 (619)
Q Consensus 34 ~~~~~al~~~k~~l~~~~~~l~~w~~~~----~~~--c~w------------~gv~c~~~~~l~~L~L~~n~l~~~~~~~ 95 (619)
..|..||++||+++.+| +|+.++ .+| |.| .||+|+...+|+.|+|++|++.|.+|+.
T Consensus 268 ~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~~ 342 (876)
T 4ecn_A 268 IKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDA 342 (876)
T ss_dssp HHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECGG
T ss_pred hHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCchH
Confidence 35999999999999877 887654 456 999 9999998789999999999999999999
Q ss_pred ccCCCCCCEEEc-cCCCCCCC-----------------------------------------------------------
Q 007073 96 IGVLRTLSTLTL-KGNGITGE----------------------------------------------------------- 115 (619)
Q Consensus 96 ~~~l~~L~~L~L-~~N~l~~~----------------------------------------------------------- 115 (619)
|++|++|+.|+| ++|.++|.
T Consensus 343 l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~ 422 (876)
T 4ecn_A 343 IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSR 422 (876)
T ss_dssp GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCC
T ss_pred HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccc
Confidence 999999999999 77765443
Q ss_pred -----------------CcccccccccCcEeeecCCCccc-----------------cCCCccc--ccccchhhhccCCc
Q 007073 116 -----------------IPEELGNLSSLTSLDLDNNRLVG-----------------KIPPSLG--NLKKLQFLTLSQNN 159 (619)
Q Consensus 116 -----------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~l~~N~ 159 (619)
+|..|++|++|++|+|++|+|+| .+|..++ ++++|+.|+|++|+
T Consensus 423 l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~ 502 (876)
T 4ecn_A 423 ISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP 502 (876)
T ss_dssp CCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT
T ss_pred cchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC
Confidence 88899999999999999999998 3999988 99999999999999
Q ss_pred CCCCCCCccccccccccccCCCCc-ccc-cCCcccc----------ccCccccCCCCCC
Q 007073 160 FSGTIPDSLTTLSSLISIQLDSNN-LSG-QIPVHLF----------QIPKYNFTGNNLN 206 (619)
Q Consensus 160 l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~l~----------~l~~l~~~~n~~~ 206 (619)
+.+.+|..+.++++|+.|+|++|+ ++| .+|..+. ++..|++++|.+.
T Consensus 503 l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 503 NMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred CCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 999999999999999999999998 998 8887554 6777889999876
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.87 E-value=1.9e-22 Score=226.16 Aligned_cols=170 Identities=25% Similarity=0.304 Sum_probs=153.2
Q ss_pred hhHHHHHHHHHhcCCCCCC--------CCCCCCCCCCCCCc---ceeEEcCCCCeEEEEeCCCCccccCCccccCCCCCC
Q 007073 35 LSGDALFALRTSLRVPNNQ--------LRDWNQNQVNPCTW---SNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLS 103 (619)
Q Consensus 35 ~~~~al~~~k~~l~~~~~~--------l~~w~~~~~~~c~w---~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (619)
.|..||.+|+.++..++.. ..+|+. +.+||.| .||+|+..++|+.|+|++|++.|.+|+.|++|++|+
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~ 108 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELE 108 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCC
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccce
Confidence 4899999999999866433 337986 4799999 999998878999999999999999999999999999
Q ss_pred EEEccCCC------------------------------------------------------------------------
Q 007073 104 TLTLKGNG------------------------------------------------------------------------ 111 (619)
Q Consensus 104 ~L~L~~N~------------------------------------------------------------------------ 111 (619)
+|+|++|.
T Consensus 109 ~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l 188 (636)
T 4eco_A 109 VLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQI 188 (636)
T ss_dssp EEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTT
T ss_pred EEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhh
Confidence 99999984
Q ss_pred ------CCCCCcccccccccCcEeeecCCCcccc-----------------CCCccc--ccccchhhhccCCcCCCCCCC
Q 007073 112 ------ITGEIPEELGNLSSLTSLDLDNNRLVGK-----------------IPPSLG--NLKKLQFLTLSQNNFSGTIPD 166 (619)
Q Consensus 112 ------l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~p~ 166 (619)
++| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|.+|.
T Consensus 189 ~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~ 267 (636)
T 4eco_A 189 GQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPT 267 (636)
T ss_dssp TCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCT
T ss_pred ccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChH
Confidence 445 888999999999999999999986 999999 999999999999999999999
Q ss_pred ccccccccccccCCCCc-ccc-cCCccc---------cccCccccCCCCCC
Q 007073 167 SLTTLSSLISIQLDSNN-LSG-QIPVHL---------FQIPKYNFTGNNLN 206 (619)
Q Consensus 167 ~~~~l~~L~~L~l~~N~-l~~-~~p~~l---------~~l~~l~~~~n~~~ 206 (619)
.+.++++|+.|++++|+ ++| .+|..+ .++..|++++|.+.
T Consensus 268 ~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 268 FLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred HHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 99999999999999999 998 899765 56777889999876
No 257
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.86 E-value=2.3e-22 Score=230.64 Aligned_cols=169 Identities=27% Similarity=0.393 Sum_probs=114.9
Q ss_pred chhHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCcceeEEcCCCCeEEEEeCCCCcccc---CCc----------------
Q 007073 34 SLSGDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGT---LSP---------------- 94 (619)
Q Consensus 34 ~~~~~al~~~k~~l~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~l~~L~L~~n~l~~~---~~~---------------- 94 (619)
..|.+||++||+++.+|. .+++|+. +.+||.|.||+|+ .++|+.|+|+++.+.|. +|+
T Consensus 11 ~~~~~all~~k~~~~~~~-~l~~W~~-~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~ 87 (768)
T 3rgz_A 11 YREIHQLISFKDVLPDKN-LLPDWSS-NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNS 87 (768)
T ss_dssp HHHHHHHHHHHTTCSCTT-SSTTCCT-TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTS
T ss_pred HHHHHHHHHHHhhCCCcc-cccCCCC-CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCC
Confidence 458999999999999988 9999974 5699999999999 67999999999999987 554
Q ss_pred -------cccCCCCCCEEEccCCCCCCCCcc--cccccccCcEeeecCCCccccCCCcc-cccccchhhhccCCcCCCCC
Q 007073 95 -------RIGVLRTLSTLTLKGNGITGEIPE--ELGNLSSLTSLDLDNNRLVGKIPPSL-GNLKKLQFLTLSQNNFSGTI 164 (619)
Q Consensus 95 -------~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~ 164 (619)
.|+.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|++++..
T Consensus 88 ~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 167 (768)
T 3rgz_A 88 HINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGAN 167 (768)
T ss_dssp CEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEET
T ss_pred CcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcC
Confidence 555666666666666666666666 66666666666666666666666554 56666666666666665554
Q ss_pred CCc---cccccccccccCCCCcccccCCc-cccccCccccCCCCC
Q 007073 165 PDS---LTTLSSLISIQLDSNNLSGQIPV-HLFQIPKYNFTGNNL 205 (619)
Q Consensus 165 p~~---~~~l~~L~~L~l~~N~l~~~~p~-~l~~l~~l~~~~n~~ 205 (619)
|.. +.++++|+.|++++|++++.+|. .+.++..|++++|..
T Consensus 168 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l 212 (768)
T 3rgz_A 168 VVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNF 212 (768)
T ss_dssp HHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCC
T ss_pred ChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcC
Confidence 443 44444555555555554444432 233444445555544
No 258
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=6.3e-21 Score=185.60 Aligned_cols=149 Identities=21% Similarity=0.274 Sum_probs=132.7
Q ss_pred CCCCCCcceeEEcCC----------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEee
Q 007073 61 QVNPCTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLD 130 (619)
Q Consensus 61 ~~~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 130 (619)
+...|+|.+|.|++. .+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|++|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 347899999999752 4799999999999999999999999999999999999966667789999999999
Q ss_pred ecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCC
Q 007073 131 LDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNC 207 (619)
Q Consensus 131 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c 207 (619)
|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+ .++..|++.+|++.|
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 9999999777777899999999999999999 899999999999999999999995444444 466778899999999
Q ss_pred CCC
Q 007073 208 GKT 210 (619)
Q Consensus 208 ~~~ 210 (619)
.|.
T Consensus 174 ~c~ 176 (229)
T 3e6j_A 174 ECR 176 (229)
T ss_dssp TBG
T ss_pred Ccc
Confidence 885
No 259
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=1.1e-20 Score=182.66 Aligned_cols=147 Identities=22% Similarity=0.281 Sum_probs=131.3
Q ss_pred CCcceeEEcCC----------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCC
Q 007073 65 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 134 (619)
Q Consensus 65 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 134 (619)
|.|..+.|.+. .+++.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 67888988752 37999999999999888889999999999999999999888999999999999999999
Q ss_pred CccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCCCCCC
Q 007073 135 RLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 135 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c~~~~ 211 (619)
+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. ++..|++.+|++.|+|.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 99965556689999999999999999988899999999999999999999965555454 566788999999999864
No 260
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.82 E-value=3e-21 Score=198.50 Aligned_cols=169 Identities=19% Similarity=0.318 Sum_probs=148.1
Q ss_pred chhHHHHHHHHHhc-CCCCCCCCCCC---CCCCCCCCcceeEEcC---------CCCeEEEEeCCCCccccCCccccCCC
Q 007073 34 SLSGDALFALRTSL-RVPNNQLRDWN---QNQVNPCTWSNVICDN---------SNNVASVTLSSMNFSGTLSPRIGVLR 100 (619)
Q Consensus 34 ~~~~~al~~~k~~l-~~~~~~l~~w~---~~~~~~c~w~gv~c~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~ 100 (619)
.++..||++||..+ .++.+.+.+|. ....++|.|.|+.|+. ..+|+.|+|++|+++ .+|+.++.++
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~ 104 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLS 104 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGT
T ss_pred chHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhCC
Confidence 56899999999988 46777788894 4466899999999952 468999999999999 7888899999
Q ss_pred CCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCcccc---------c
Q 007073 101 TLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTT---------L 171 (619)
Q Consensus 101 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~---------l 171 (619)
+|++|+|++|.|+ .+|..++++++|++|+|++|+|+ .+|..++++++|+.|+|++|++.+.+|..+.. +
T Consensus 105 ~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l 182 (328)
T 4fcg_A 105 HLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGL 182 (328)
T ss_dssp TCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEES
T ss_pred CCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccC
Confidence 9999999999999 89999999999999999999999 88999999999999999999988899988765 8
Q ss_pred cccccccCCCCcccccCCcccc---ccCccccCCCCCC
Q 007073 172 SSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLN 206 (619)
Q Consensus 172 ~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~ 206 (619)
++|+.|++++|+++ .+|..+. ++..|++++|.+.
T Consensus 183 ~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 183 VNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp TTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred CCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 99999999999999 8887665 4556778888765
No 261
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=2.6e-20 Score=180.05 Aligned_cols=147 Identities=24% Similarity=0.290 Sum_probs=130.5
Q ss_pred CCcceeEEcCC----------CCeEEEEeCCCCccccCC-ccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecC
Q 007073 65 CTWSNVICDNS----------NNVASVTLSSMNFSGTLS-PRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN 133 (619)
Q Consensus 65 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (619)
|.|..+.|++. ..++.|+|++|+|++..+ ..|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 56777887642 368899999999998865 4589999999999999999987788999999999999999
Q ss_pred CCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCCCCC
Q 007073 134 NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 134 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c~~~ 210 (619)
|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..+. ++..|++++|++.|+|+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999987778899999999999999999988899999999999999999999977787665 56678899999999987
Q ss_pred C
Q 007073 211 L 211 (619)
Q Consensus 211 ~ 211 (619)
+
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 4
No 262
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.79 E-value=2.3e-19 Score=171.75 Aligned_cols=147 Identities=20% Similarity=0.262 Sum_probs=128.3
Q ss_pred CCCcceeEEcCC----------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecC
Q 007073 64 PCTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN 133 (619)
Q Consensus 64 ~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (619)
.|.|.++.|+.. .+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 478999999752 3799999999999988777889999999999999999977677789999999999999
Q ss_pred CCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCCCC
Q 007073 134 NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 134 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~~~ 210 (619)
|+|++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|++++|++++..+..+ .++..|++++|++.|.++
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99997666778999999999999999997667778999999999999999995444434 467778999999998775
No 263
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=3.6e-19 Score=176.40 Aligned_cols=137 Identities=18% Similarity=0.163 Sum_probs=105.8
Q ss_pred CcccCccccCCCceEEEEEe-CCCcE--EEEEEeccCCCc-----------------------chHHHHHHHHHHHHHcc
Q 007073 296 FSEKNVLGQGGFGKVYRGVL-ADGTK--VAVKRLTDFESP-----------------------GGDAAFQREVEMISVAV 349 (619)
Q Consensus 296 ~~~~~~lg~G~fg~Vy~~~~-~~g~~--vAvK~l~~~~~~-----------------------~~~~~~~~E~~~l~~l~ 349 (619)
|.+.+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+|+.++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999998 68999 999987532111 01236789999999999
Q ss_pred CCCc--cceeeeeeCCCcceeEeccccc-c----hhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHH-hcCCCCeEe
Q 007073 350 HRNL--LRLIGFCTTPTERLLVYPFMQN-L----SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH-EHCNPKIIH 421 (619)
Q Consensus 350 H~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~ivH 421 (619)
|+++ ..++++ ...++||||+.+ | +|.+.... .+......++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8864 333332 367899999943 4 44444322 224456789999999999999 88 9999
Q ss_pred cCCCCCcEEeCCCCcEEEcccccceee
Q 007073 422 RDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 422 ~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
|||||+|||++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999754
No 264
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.78 E-value=1.7e-19 Score=206.82 Aligned_cols=122 Identities=36% Similarity=0.637 Sum_probs=108.3
Q ss_pred CCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccc
Q 007073 98 VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISI 177 (619)
Q Consensus 98 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 177 (619)
.+++|+.|+|++|+++|.+|..|+++++|+.|+|++|+|+|.+|..|+++++|+.|||++|+++|.+|..+..+++|++|
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 35678888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccCCc--cccccCccccCCCCCCCCCCCCCCCCCCCC
Q 007073 178 QLDSNNLSGQIPV--HLFQIPKYNFTGNNLNCGKTLPHSCESSSN 220 (619)
Q Consensus 178 ~l~~N~l~~~~p~--~l~~l~~l~~~~n~~~c~~~~~~~c~~~~~ 220 (619)
++++|+++|.||. .+..++.+.+.||++.|+.+++ +|.....
T Consensus 710 ~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~~~ 753 (768)
T 3rgz_A 710 DLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPSNA 753 (768)
T ss_dssp ECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSCC-
T ss_pred ECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCCcc
Confidence 9999999999995 4677888899999999999987 8876543
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=1.3e-18 Score=164.39 Aligned_cols=125 Identities=27% Similarity=0.364 Sum_probs=88.0
Q ss_pred CCcceeEEcCC----------CCeEEEEeCCCCccccCCc-cccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecC
Q 007073 65 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSP-RIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN 133 (619)
Q Consensus 65 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (619)
|.|..+.|++. .+++.|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56666666531 2677777777777755553 367777777777777777766677777777777777777
Q ss_pred CCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCC
Q 007073 134 NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 189 (619)
Q Consensus 134 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 189 (619)
|+|++..|..|.++++|+.|+|++|+|++..|..+..+++|+.|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 77776666667777777777777777776667777777777777777777776555
No 266
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.75 E-value=5.2e-18 Score=167.37 Aligned_cols=134 Identities=20% Similarity=0.257 Sum_probs=117.7
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 46899999999999988888899999999999999999977778889999999999999999976666789999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCG 208 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~ 208 (619)
|++|+|++..+..|..+++|+.|+|++|++++..|..+ .++..|++.+|++.|.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999996666689999999999999999996555444 4667788999999987
No 267
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.75 E-value=7.3e-20 Score=198.37 Aligned_cols=141 Identities=23% Similarity=0.277 Sum_probs=108.7
Q ss_pred CCcceeEEcCCCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCccccc-ccccCcEeeecCCCccccCCCc
Q 007073 65 CTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELG-NLSSLTSLDLDNNRLVGKIPPS 143 (619)
Q Consensus 65 c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~ 143 (619)
|.+.++.|...++|+.|+|++|.+++..|..++.+++|+.|+|++|.|++.+|..+. ++++|+.|+|++|.|++. |.
T Consensus 109 N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~- 186 (487)
T 3oja_A 109 NNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG- 186 (487)
T ss_dssp SCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-
T ss_pred CcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-
Confidence 456667777777888888888888888788888888888888888888877777775 688888888888888855 32
Q ss_pred ccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCCCC
Q 007073 144 LGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGK 209 (619)
Q Consensus 144 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c~~ 209 (619)
+..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+++ .+|..+. ++..|++++|++.|++
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 187 QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCcc
Confidence 3458888888888888884 5555788888888888888888 4776554 4556778888887764
No 268
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.75 E-value=8.3e-19 Score=176.90 Aligned_cols=135 Identities=27% Similarity=0.292 Sum_probs=119.2
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|.++ .+|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 76 l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 76 LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 468999999999998 7788899999999999999999977778899999999999999999977777789999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c~~~~ 211 (619)
|++|+|++..+..+..+++|+.|+|++|+++ .+|..+. ++..+.+.+|+|.|+|..
T Consensus 155 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 155 LANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred CCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCcc
Confidence 9999999555556788999999999999999 7887665 466788999999999853
No 269
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.73 E-value=3.2e-18 Score=170.81 Aligned_cols=136 Identities=20% Similarity=0.244 Sum_probs=112.0
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 84 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 163 (270)
T 2o6q_A 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELR 163 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeE
Confidence 35788889998888877777788889999999999999877777788899999999999999866566688899999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~~~ 210 (619)
|++|++++..+..|..+++|+.|++++|++++..+..+ .++..|++.+|++.|+|.
T Consensus 164 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 164 LYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 99999986666678889999999999999984333334 456678899999999885
No 270
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.73 E-value=9e-18 Score=165.65 Aligned_cols=131 Identities=20% Similarity=0.249 Sum_probs=115.1
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+++.|+|++|++++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 36899999999999888889999999999999999999888888999999999999999999777788899999999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLN 206 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~ 206 (619)
++|+|++..+..|..+++|+.|+|++|++++..|..+ .++..|++++|.+.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 9999996666678899999999999999995545445 46677889998875
No 271
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=5.8e-18 Score=159.80 Aligned_cols=130 Identities=22% Similarity=0.348 Sum_probs=115.8
Q ss_pred EEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcc-cccccccCcEeeecCCCccccCCCcccccccchhhhccC
Q 007073 79 ASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPE-ELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQ 157 (619)
Q Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 157 (619)
+.|++++|+++ .+|..+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68999999997 67766543 999999999999966654 489999999999999999988899999999999999999
Q ss_pred CcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCCCCCC
Q 007073 158 NNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 158 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c~~~~ 211 (619)
|+|++..|..|..+++|+.|+|++|++++.+|..+. ++..|++++|++.|+|++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 999988888899999999999999999988887665 566788999999999863
No 272
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.72 E-value=2.1e-18 Score=176.04 Aligned_cols=136 Identities=30% Similarity=0.476 Sum_probs=107.2
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+|+.|+|++|.+++.+|..+..++ |+.|+|++|++++.+|..|.++++|+.|+|++|++++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 566666666666666666666665 67777777777666777777788888888888888765554 7788889999999
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccccCCcc--ccccCccccCCCCCCCCCCCCCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH--LFQIPKYNFTGNNLNCGKTLPHSC 215 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--l~~l~~l~~~~n~~~c~~~~~~~c 215 (619)
+|+|++.+|..+..+++|+.|+|++|+++|.+|.. +.++..+++.+|++.|+.+++ .|
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 99998889999999999999999999999999864 567778889999999998765 45
No 273
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=1e-17 Score=158.13 Aligned_cols=128 Identities=30% Similarity=0.427 Sum_probs=112.2
Q ss_pred EEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCC
Q 007073 79 ASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQN 158 (619)
Q Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 158 (619)
+.+++++|+++ .+|..+ .++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46788899998 566655 368999999999999 88899999999999999999999877888999999999999999
Q ss_pred cCCCCCCCccccccccccccCCCCcccccCCc-cc---cccCccccCCCCCCCCCCC
Q 007073 159 NFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV-HL---FQIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 159 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~l---~~l~~l~~~~n~~~c~~~~ 211 (619)
+|++..|..|..+++|+.|+|++|+|++ +|. .+ .++..|++.+|++.|+|.+
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISV-VPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCB-CCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCe-eChhhhhcCccccEEEeCCCCeecCCcC
Confidence 9997778889999999999999999994 554 34 4677789999999999863
No 274
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.71 E-value=2.1e-17 Score=165.12 Aligned_cols=136 Identities=20% Similarity=0.206 Sum_probs=115.5
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 45899999999999988777788999999999999999977777788999999999999999977677788999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~~~ 210 (619)
|++|++++..|..+..+++|+.|++++|++++..|..+ .++..|++.+|++.|.++
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 99999997777778889999999999999997666444 456678899999988765
No 275
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.71 E-value=4.4e-18 Score=171.21 Aligned_cols=137 Identities=22% Similarity=0.248 Sum_probs=110.2
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|++++..|..|..+++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+
T Consensus 104 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 35788888888888877778888888888888888888866666788888888888888888865556688888888888
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~~~~ 211 (619)
|++|++++..|..+..+++|+.|++++|++++..|..+ .++..|++++|++.|+|+.
T Consensus 184 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred CCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 88888887778888888889999999998885443334 4566678899999888763
No 276
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=2.4e-17 Score=153.32 Aligned_cols=125 Identities=23% Similarity=0.309 Sum_probs=74.3
Q ss_pred CCcceeEEcCC----------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCC
Q 007073 65 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 134 (619)
Q Consensus 65 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 134 (619)
|.|.++.|++. .+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 57888877642 25666666666666555555566666666666666666444444566666666666666
Q ss_pred CccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCC
Q 007073 135 RLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 189 (619)
Q Consensus 135 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 189 (619)
+|++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|++++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6664444455666666666666666664333344556666666666666665443
No 277
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.69 E-value=5.4e-17 Score=161.86 Aligned_cols=129 Identities=21% Similarity=0.221 Sum_probs=76.2
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+++.|+|++|++++..+..|..+++|++|+|++|+|+...+..|.++++|++|+|++|++++..+..|.++++|+.|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 45666666666665555566666666666666666664444445666666666666666665444555666666666666
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNL 205 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~ 205 (619)
+|++++..|..|..+++|+.|+|++|++++..+..+ .++..|++++|..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcC
Confidence 666665555556666666666666666663222222 3444555666554
No 278
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=3.4e-17 Score=168.71 Aligned_cols=141 Identities=12% Similarity=0.085 Sum_probs=100.7
Q ss_pred CCcccCccccCCCceEEEEEeCCCcEEEEEEeccCC-------------CcchHHHHHHHHHHHHHccCCCccceeeeee
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-------------SPGGDAAFQREVEMISVAVHRNLLRLIGFCT 361 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~-------------~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 361 (619)
-|++.+.||+|+||.||+|...+|+.||||+++... ..........++++.+...|+|+++++....
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 388999999999999999999899999999875311 0111223333444444444444444432211
Q ss_pred C------CCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007073 362 T------PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 435 (619)
Q Consensus 362 ~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 435 (619)
. ....++||||+++++|...... .....++.|++.+|.|||+. |||||||||.|||+++++
T Consensus 176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 176 PVPEPIAQSRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEK 242 (397)
T ss_dssp SCCCEEEEETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEE
T ss_pred CCCeeeeccCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCC
Confidence 1 1234799999999888665431 12356789999999999999 999999999999998776
Q ss_pred ----------cEEEcccccceee
Q 007073 436 ----------EAVVGDFGLAKLV 448 (619)
Q Consensus 436 ----------~~kl~DfGla~~~ 448 (619)
.+.|+||+-+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3899999987643
No 279
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.68 E-value=1.9e-17 Score=172.54 Aligned_cols=134 Identities=28% Similarity=0.312 Sum_probs=101.6
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 45788888888888877777788888888888888888866666778888888888888888877777888888888888
Q ss_pred ccCCcCCCCCCCcc----ccccccccccCCCCcccccCC-cccccc-----CccccCCCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSL----TTLSSLISIQLDSNNLSGQIP-VHLFQI-----PKYNFTGNNLNCGKT 210 (619)
Q Consensus 155 l~~N~l~~~~p~~~----~~l~~L~~L~l~~N~l~~~~p-~~l~~l-----~~l~~~~n~~~c~~~ 210 (619)
|++|+|+ .+|..+ ..+++|+.|+|++|+|+ .+| ..+..+ ..|++.+|++.|+|.
T Consensus 143 L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 143 LSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCSSCCC-SCCGGGTC----CTTCCEEECCSSCCC-CCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCC-ccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 8888888 455443 46788888888888888 455 344444 457889999999885
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.67 E-value=5.7e-17 Score=181.45 Aligned_cols=159 Identities=18% Similarity=0.189 Sum_probs=124.9
Q ss_pred CCCCCCCCCCC---CCCCCCcc----eeEEcCC----------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCC
Q 007073 50 PNNQLRDWNQN---QVNPCTWS----NVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGI 112 (619)
Q Consensus 50 ~~~~l~~w~~~---~~~~c~w~----gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 112 (619)
+...+++|+.. ...||.+. .+.|.+. .+++.|||++|+|+++.+..|.++++|++|+|++|+|
T Consensus 9 ~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i 88 (635)
T 4g8a_A 9 DDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI 88 (635)
T ss_dssp ----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcC
Confidence 33445555432 12456442 4778642 3799999999999988888999999999999999999
Q ss_pred CCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccc-cCCcc
Q 007073 113 TGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSG-QIPVH 191 (619)
Q Consensus 113 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~ 191 (619)
++..|..|.+|++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|++++|++++ .+|..
T Consensus 89 ~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~ 168 (635)
T 4g8a_A 89 QTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 168 (635)
T ss_dssp CEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred CCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchh
Confidence 97778889999999999999999997666789999999999999999997667789999999999999999985 35655
Q ss_pred c---cccCccccCCCCCCCC
Q 007073 192 L---FQIPKYNFTGNNLNCG 208 (619)
Q Consensus 192 l---~~l~~l~~~~n~~~c~ 208 (619)
+ .++..|++++|.+...
T Consensus 169 ~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 169 FSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp GGGCTTCCEEECCSSCCCEE
T ss_pred hccchhhhhhcccCcccccc
Confidence 4 4566788999987543
No 281
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.66 E-value=3.5e-17 Score=175.24 Aligned_cols=134 Identities=26% Similarity=0.313 Sum_probs=110.9
Q ss_pred CCeEEEEeCCC-CccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 76 NNVASVTLSSM-NFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 76 ~~l~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
.+|+.|+|++| .+....+..|..+++|++|+|++|+|+ .+|. +..+++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 160 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 237 (440)
T 3zyj_A 160 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 237 (440)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEE
Confidence 46677777763 334333446778888999999999988 6664 88899999999999999988899999999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~~~~ 211 (619)
|++|+|++..|..|..+++|+.|+|++|++++..+..+ .++..|++.+|++.|+|.+
T Consensus 238 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 238 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred CCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 99999998888899999999999999999995444443 4677789999999999964
No 282
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.66 E-value=6.9e-17 Score=164.15 Aligned_cols=135 Identities=24% Similarity=0.320 Sum_probs=84.5
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCC-CCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITG-EIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
.+|+.|+|++|.+.+..+..+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 205 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE
Confidence 356666666666665555666666666666666666654 3556666666666666666666655566666666666666
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCcccc----ccCccccCCCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF----QIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~----~l~~l~~~~n~~~c~~~ 210 (619)
|++|++++..+..+..+++|+.|++++|++++..|..+. ++..|++++|++.|+|.
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 666666644444566666666666666666665555443 34456666777666654
No 283
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.66 E-value=8.8e-17 Score=172.79 Aligned_cols=135 Identities=26% Similarity=0.258 Sum_probs=124.4
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|+.|+|++|++++.+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 47999999999999999999999999999999999999888999999999999999999999888899999999999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCcc---ccccCccccCCCCCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~---l~~l~~l~~~~n~~~c~~~ 210 (619)
++|++++..|..+..+++|+.|++++|++++..+.. +.++..|++++|++.|+|+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999888999999999999999999999544433 3467778999999999987
No 284
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.66 E-value=1.1e-16 Score=166.78 Aligned_cols=141 Identities=23% Similarity=0.292 Sum_probs=124.3
Q ss_pred CCcceeEEcC----------CCCeEEEEeCCCCccccCCcccc-CCCCCCEEEccCCCCCCCCcccccccccCcEeeecC
Q 007073 65 CTWSNVICDN----------SNNVASVTLSSMNFSGTLSPRIG-VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN 133 (619)
Q Consensus 65 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (619)
|.+..+.|.+ ...++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 4677778864 23689999999999988888887 999999999999999977778899999999999999
Q ss_pred CCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCcc-------ccccCccccCCCCCC
Q 007073 134 NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH-------LFQIPKYNFTGNNLN 206 (619)
Q Consensus 134 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-------l~~l~~l~~~~n~~~ 206 (619)
|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+ .+|.. +.++..|++++|.+.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 9999777778999999999999999999777899999999999999999999 57754 346777889998864
No 285
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=1.8e-16 Score=149.69 Aligned_cols=123 Identities=25% Similarity=0.381 Sum_probs=109.3
Q ss_pred CCcceeEEcC----------CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCC
Q 007073 65 CTWSNVICDN----------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 134 (619)
Q Consensus 65 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 134 (619)
|.|..+.|++ ..+++.|+|++|+|+ .+|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4566666654 237999999999998 77789999999999999999999888889999999999999999
Q ss_pred CccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccC
Q 007073 135 RLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQI 188 (619)
Q Consensus 135 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 188 (619)
+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++...-
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 999888889999999999999999999555567899999999999999998543
No 286
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.65 E-value=6.4e-17 Score=173.82 Aligned_cols=134 Identities=22% Similarity=0.263 Sum_probs=108.9
Q ss_pred CCeEEEEeCCC-CccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 76 NNVASVTLSSM-NFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 76 ~~l~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
.+|+.|+|++| .+....+..|..+++|++|+|++|+|+ .+|. +..+++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 171 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 248 (452)
T 3zyi_A 171 PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLW 248 (452)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCCC-CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEE
T ss_pred CcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-cccc-ccccccccEEECcCCcCcccCcccccCccCCCEEE
Confidence 35666666653 333333345777888888888889888 4554 88899999999999999988899999999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~~~~ 211 (619)
|++|++++..|..|..+++|+.|+|++|+|++..+..+ .++..|++.+|++.|+|.+
T Consensus 249 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 249 VMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred eCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 99999998889999999999999999999995444443 4677789999999999974
No 287
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.64 E-value=2.8e-16 Score=151.56 Aligned_cols=115 Identities=19% Similarity=0.228 Sum_probs=109.1
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|.|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 46899999999999998888999999999999999999988888899999999999999999988899999999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 189 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 189 (619)
|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999998889999999999999999999997665
No 288
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.64 E-value=1.4e-16 Score=178.34 Aligned_cols=137 Identities=24% Similarity=0.309 Sum_probs=124.7
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCC-CCCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGIT-GEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
..+++.++++.|.+.+..+..+..++.|+.|+|++|++. +.+|..|..+++|++|+|++|+|++..|..|.++++|++|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 457899999999999999999999999999999999854 4578889999999999999999999889999999999999
Q ss_pred hccCCcCCCCCCCccccccccccccCCCCcccccCCcccc----ccCccccCCCCCCCCCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF----QIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~----~l~~l~~~~n~~~c~~~~ 211 (619)
+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. ++..|++++|||.|+|.+
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 9999999987788899999999999999999988887664 566789999999999973
No 289
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.63 E-value=1.3e-16 Score=159.54 Aligned_cols=134 Identities=20% Similarity=0.258 Sum_probs=72.9
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCcccc-CCCcccccccchhhhc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGK-IPPSLGNLKKLQFLTL 155 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l 155 (619)
+|+.|+|++|.+++..+..|..+++|++|+|++|++++..+..+.++++|++|+|++|++++. +|..|.++++|+.|+|
T Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~L 156 (276)
T 2z62_A 77 HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDL 156 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEEC
T ss_pred CCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEEC
Confidence 455555555555544444455555555555555555543333444555555555555555431 3444555555555555
Q ss_pred cCCcCCCC---------------------------CCCccccccccccccCCCCcccccCCcc---ccccCccccCCCCC
Q 007073 156 SQNNFSGT---------------------------IPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNNL 205 (619)
Q Consensus 156 ~~N~l~~~---------------------------~p~~~~~l~~L~~L~l~~N~l~~~~p~~---l~~l~~l~~~~n~~ 205 (619)
++|++++. +|.......+|+.|++++|++++..+.. +.++..|++++|++
T Consensus 157 s~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 236 (276)
T 2z62_A 157 SSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 236 (276)
T ss_dssp CSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCB
T ss_pred CCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcc
Confidence 55444432 2222333347788888888888433333 34566678889998
Q ss_pred CCCCC
Q 007073 206 NCGKT 210 (619)
Q Consensus 206 ~c~~~ 210 (619)
.|+|+
T Consensus 237 ~c~c~ 241 (276)
T 2z62_A 237 DCSCP 241 (276)
T ss_dssp CCCTT
T ss_pred cccCC
Confidence 88875
No 290
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=5.3e-16 Score=144.22 Aligned_cols=130 Identities=21% Similarity=0.268 Sum_probs=111.0
Q ss_pred eEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccC
Q 007073 78 VASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQ 157 (619)
Q Consensus 78 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 157 (619)
.+.+++++|+++ .+|..+ .++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 468999999998 455444 47999999999999977777789999999999999999976667789999999999999
Q ss_pred CcCCCCCCCccccccccccccCCCCcccccCCcc---ccccCccccCCCCCCCCCC
Q 007073 158 NNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 158 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~---l~~l~~l~~~~n~~~c~~~ 210 (619)
|+|++..+..+..+++|+.|++++|++++..+.. +.++..|++++|++.|.++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999777777899999999999999999543333 3467778999999998875
No 291
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.63 E-value=3.8e-16 Score=160.35 Aligned_cols=130 Identities=22% Similarity=0.306 Sum_probs=109.6
Q ss_pred CCCeEEEEeCCCCccccCCccccC---------CCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCccc
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGV---------LRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLG 145 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 145 (619)
..+|+.|+|++|++.+.+|..+.. +++|++|+|++|+|+ .+|..++++++|++|+|++|+++ .+|..++
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~ 226 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIH 226 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhc
Confidence 458899999998888888887664 889999999999998 88888889999999999999998 4777888
Q ss_pred ccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCccccc---cCccccCCCCCC
Q 007073 146 NLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQ---IPKYNFTGNNLN 206 (619)
Q Consensus 146 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~---l~~l~~~~n~~~ 206 (619)
++++|+.|+|++|++.+.+|..+..+++|+.|++++|++.+.+|..+.+ +..|++++|+..
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 8999999999998888888888888999999999998888888876654 455778887764
No 292
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.63 E-value=8.1e-16 Score=153.79 Aligned_cols=130 Identities=18% Similarity=0.180 Sum_probs=112.0
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+++.|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|+.|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 69999999999998887789999999999999999997777789999999999999999998777889999999999999
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccc-cCCcccc---ccCccccCCCCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSG-QIPVHLF---QIPKYNFTGNNLN 206 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~l~---~l~~l~~~~n~~~ 206 (619)
+|++++..+..+..+++|+.|++++|++++ .+|..+. ++..|++++|...
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC
Confidence 999997666688999999999999999985 3676665 4566778888653
No 293
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.63 E-value=2e-16 Score=176.43 Aligned_cols=136 Identities=23% Similarity=0.244 Sum_probs=117.6
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCC-CCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITG-EIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
..+|+.|+|++|.+.+..|..+..+++|++|+|++|++++ .+|..+..+++|+.|+|++|++++..|..|.++++|+.|
T Consensus 423 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 4578888888888888888888889999999999999887 478888999999999999999998888889999999999
Q ss_pred hccCCcCCCCCCCccccccccccccCCCCcccccCCccccc----cCccccCCCCCCCCCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQ----IPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~----l~~l~~~~n~~~c~~~~ 211 (619)
+|++|++++..|..+..+++|+.|++++|+++ .+|..+.. +..+++.+|++.|+|+.
T Consensus 503 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 503 NMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp ECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999999888889999999999999999998 78876543 56688999999998874
No 294
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.63 E-value=2.5e-16 Score=158.35 Aligned_cols=131 Identities=22% Similarity=0.261 Sum_probs=91.2
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCC-CCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNG-ITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
.+|+.|+|++|.+++..|..|..+++|++|+|++|+ ++...|..|.++++|++|+|++|++++..|..|.++++|+.|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 467777777777777767777777777777777776 6655566777777777777777777766667777777777777
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLN 206 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~ 206 (619)
|++|++++..+..+..+++|+.|++++|++++..+..+ .++..|++++|...
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 77777775555557777777777777777774333333 34555667776653
No 295
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=3.6e-16 Score=143.97 Aligned_cols=127 Identities=22% Similarity=0.287 Sum_probs=110.6
Q ss_pred CCeEEEEeCCCCcc-ccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 76 NNVASVTLSSMNFS-GTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 76 ~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
.+|+.|+|++|+++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+.++++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 47999999999998 78888899999999999999999965 6799999999999999999977888888899999999
Q ss_pred ccCCcCCCCCC--CccccccccccccCCCCcccccCCc----cc---cccCccccCCCCCC
Q 007073 155 LSQNNFSGTIP--DSLTTLSSLISIQLDSNNLSGQIPV----HL---FQIPKYNFTGNNLN 206 (619)
Q Consensus 155 l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~p~----~l---~~l~~l~~~~n~~~ 206 (619)
|++|+|++ +| ..+..+++|+.|++++|++++ +|. .+ .++..|++.+|...
T Consensus 102 Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTN-LNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGT-STTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcc-hHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999994 44 788999999999999999995 554 44 45666777777654
No 296
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.61 E-value=9.8e-16 Score=170.83 Aligned_cols=146 Identities=18% Similarity=0.217 Sum_probs=118.6
Q ss_pred CCCCCcc----eeEEcC----------CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCc
Q 007073 62 VNPCTWS----NVICDN----------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLT 127 (619)
Q Consensus 62 ~~~c~w~----gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 127 (619)
.+||.+. .+.|.+ ..+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|+
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 3566552 466754 24789999999999988888899999999999999999977788899999999
Q ss_pred EeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccc-cCCcccc---ccCccccCCC
Q 007073 128 SLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSG-QIPVHLF---QIPKYNFTGN 203 (619)
Q Consensus 128 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~l~---~l~~l~~~~n 203 (619)
+|+|++|++++..|..|+++++|++|+|++|++++..|..+..+++|++|++++|++++ .+|..+. ++..|++++|
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 99999999997778899999999999999999986666888899999999999999885 5687665 4555678887
Q ss_pred CCCC
Q 007073 204 NLNC 207 (619)
Q Consensus 204 ~~~c 207 (619)
....
T Consensus 164 ~l~~ 167 (606)
T 3vq2_A 164 YIQT 167 (606)
T ss_dssp CCCE
T ss_pred ccee
Confidence 6643
No 297
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.60 E-value=1.3e-15 Score=146.91 Aligned_cols=113 Identities=23% Similarity=0.284 Sum_probs=105.0
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|.|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 46899999999999999999999999999999999999966666689999999999999999988899999999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCccccc
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQ 187 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 187 (619)
|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 999999977777899999999999999999753
No 298
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.60 E-value=1.3e-15 Score=169.41 Aligned_cols=153 Identities=16% Similarity=0.183 Sum_probs=108.1
Q ss_pred CCCCCCCCCCCCCC----cceeEEcC-----------------CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCC
Q 007073 53 QLRDWNQNQVNPCT----WSNVICDN-----------------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNG 111 (619)
Q Consensus 53 ~l~~w~~~~~~~c~----w~gv~c~~-----------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 111 (619)
.+++|.+. .+||. |.++.|+. ..+++.|++++|.+....+..|..+++|++|+|++|.
T Consensus 8 ~l~~~~~~-~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~ 86 (597)
T 3oja_B 8 NVKPRQPE-YKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ 86 (597)
T ss_dssp ---CCCSE-ECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSC
T ss_pred cccCCCCC-CcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCC
Confidence 56788763 45653 66655541 1357778888888876666667778888888888888
Q ss_pred CCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCcc
Q 007073 112 ITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH 191 (619)
Q Consensus 112 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 191 (619)
|++..|..|+.+++|++|+|++|.|++..|..|+++++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..|..
T Consensus 87 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 166 (597)
T 3oja_B 87 IEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDT 166 (597)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTT
T ss_pred CCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhh
Confidence 88766777888888888888888888776777788888888888888887444445677888888888888888666655
Q ss_pred cc---ccCccccCCCCCC
Q 007073 192 LF---QIPKYNFTGNNLN 206 (619)
Q Consensus 192 l~---~l~~l~~~~n~~~ 206 (619)
+. ++..|++++|.+.
T Consensus 167 ~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 167 FQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp TTTCTTCCEEECTTSCCS
T ss_pred hhcCCcCcEEECcCCCCC
Confidence 54 4555667777654
No 299
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=3.4e-16 Score=141.08 Aligned_cols=121 Identities=22% Similarity=0.290 Sum_probs=105.9
Q ss_pred CCeEEEEeCCCCcc-ccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 76 NNVASVTLSSMNFS-GTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 76 ~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
.+++.|++++|+++ +.+|..+..+++|+.|+|++|++++. ..++++++|++|+|++|++++.+|..+.++++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 47999999999998 78899999999999999999999965 6799999999999999999977888888899999999
Q ss_pred ccCCcCCCC-CCCccccccccccccCCCCcccccCC---ccccccCcc
Q 007073 155 LSQNNFSGT-IPDSLTTLSSLISIQLDSNNLSGQIP---VHLFQIPKY 198 (619)
Q Consensus 155 l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p---~~l~~l~~l 198 (619)
+++|++++. .|..+..+++|+.|++++|++++..+ ..+..+++|
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L 142 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQL 142 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCc
Confidence 999999953 34889999999999999999995444 245555444
No 300
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.60 E-value=8.3e-16 Score=165.12 Aligned_cols=145 Identities=26% Similarity=0.322 Sum_probs=124.9
Q ss_pred CCCCcce--eEEcCC---------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCC-cccccccccCcEee
Q 007073 63 NPCTWSN--VICDNS---------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEI-PEELGNLSSLTSLD 130 (619)
Q Consensus 63 ~~c~w~g--v~c~~~---------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 130 (619)
..|.|.+ +.|++. .+|++|+|++|++++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4566665 788652 47999999999999998999999999999999999998666 56799999999999
Q ss_pred ecCCCccccCCCcccccccchhhhccCCcCCCCCCCc--cccccccccccCCCCcccccCCcc-c---cccCccccCCCC
Q 007073 131 LDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDS--LTTLSSLISIQLDSNNLSGQIPVH-L---FQIPKYNFTGNN 204 (619)
Q Consensus 131 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~~-l---~~l~~l~~~~n~ 204 (619)
|++|++++..|..|+++++|++|+|++|++++.+|.. +..+++|+.|+|++|++++..|.. + .++..|++++|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999755544 899999999999999999777764 3 456678899988
Q ss_pred CCC
Q 007073 205 LNC 207 (619)
Q Consensus 205 ~~c 207 (619)
...
T Consensus 166 l~~ 168 (455)
T 3v47_A 166 VKS 168 (455)
T ss_dssp BSC
T ss_pred ccc
Confidence 653
No 301
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.59 E-value=3.3e-16 Score=172.49 Aligned_cols=142 Identities=22% Similarity=0.323 Sum_probs=119.9
Q ss_pred CCCcceeEEcCC------------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeee
Q 007073 64 PCTWSNVICDNS------------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDL 131 (619)
Q Consensus 64 ~c~w~gv~c~~~------------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 131 (619)
+|.|.|+ |+.. .+|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5888888 7632 37999999999999888889999999999999999999888888999999999999
Q ss_pred cCCCccccCCCcccccccchhhhccCCcCCC-CCCCccccccccccccCCCCcccccCC-cccc---ccCccccCCCCCC
Q 007073 132 DNNRLVGKIPPSLGNLKKLQFLTLSQNNFSG-TIPDSLTTLSSLISIQLDSNNLSGQIP-VHLF---QIPKYNFTGNNLN 206 (619)
Q Consensus 132 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~---~l~~l~~~~n~~~ 206 (619)
++|++++..|..|+++++|++|+|++|++++ .+|..+..+++|+.|++++|++.+.+| ..+. ++..|++++|...
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999997766779999999999999999986 357788999999999999998655776 3444 5556778887764
No 302
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.59 E-value=8.5e-16 Score=150.20 Aligned_cols=129 Identities=18% Similarity=0.209 Sum_probs=111.4
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCC-CCCCCcccccccccCcEeeecC-CCccccCCCcccccccchhh
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNG-ITGEIPEELGNLSSLTSLDLDN-NRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L 153 (619)
.+++.|+|++|++++..+..|..+++|++|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999998888899999999999999997 8866666899999999999999 99997777889999999999
Q ss_pred hccCCcCCCCCCCccccccccc---cccCCCC-cccccCCcccc---ccC-ccccCCCCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLI---SIQLDSN-NLSGQIPVHLF---QIP-KYNFTGNNLN 206 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~l~---~l~-~l~~~~n~~~ 206 (619)
+|++|++++ +|+ +..+++|+ .|++++| ++++..+..+. ++. .|++++|.+.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 999999994 787 88888888 9999999 99854444454 555 7778888764
No 303
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.59 E-value=3.4e-15 Score=148.91 Aligned_cols=131 Identities=21% Similarity=0.269 Sum_probs=114.5
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|.+++. +.+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|+.|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 46899999999999864 4789999999999999999987788889999999999999999977777799999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNC 207 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c 207 (619)
|++|++++..|..+..+++|+.|++++|++++..|..+ .++..|++++|.+..
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 99999997777778999999999999999996555443 467778899988753
No 304
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.59 E-value=4.4e-15 Score=144.12 Aligned_cols=114 Identities=24% Similarity=0.234 Sum_probs=104.8
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 468999999999999777778899999999999999999777777899999999999999999 8999999999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 189 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 189 (619)
|++|+|++..+..+..+++|+.|++++|++++..+
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999996666789999999999999999997654
No 305
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.58 E-value=2.5e-16 Score=182.28 Aligned_cols=135 Identities=21% Similarity=0.232 Sum_probs=113.7
Q ss_pred CCCeEEEEeCCCCccccCCc-cccCCCCCCEEEccCCCCC-----CCCcccccccccCcEeeecCCCccccCCCcccccc
Q 007073 75 SNNVASVTLSSMNFSGTLSP-RIGVLRTLSTLTLKGNGIT-----GEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLK 148 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 148 (619)
..+|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|.+++
T Consensus 425 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 504 (844)
T 3j0a_A 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT 504 (844)
T ss_dssp CTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCC
T ss_pred CCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchh
Confidence 45788888888888765443 3556788888888888887 34456688899999999999999988888899999
Q ss_pred cchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCccccccCccccCCCCCCCCCCC
Q 007073 149 KLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 149 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~~~c~~~~ 211 (619)
+|+.|+|++|+|++..|..+. ++|+.|+|++|++++.+|..+.++..+++++|++.|+|++
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred hhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 999999999999966566555 8999999999999999999999999999999999999874
No 306
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.57 E-value=5.3e-15 Score=148.94 Aligned_cols=127 Identities=28% Similarity=0.345 Sum_probs=80.8
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|+.|+|++|+|++..+. +.+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 55 ~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 4666666666666644332 56666666666666666 56666666777777777777777555566677777777777
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCc-c---ccccCccccCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV-H---LFQIPKYNFTGNNLN 206 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~---l~~l~~l~~~~n~~~ 206 (619)
++|+|++..+..|..+++|+.|+|++|+|+ .+|. . +.++..|++++|.+.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCS-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCC-ccCHHHhcCcCCCCEEECCCCcCC
Confidence 777776555555666677777777777776 3443 2 234555666666654
No 307
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.57 E-value=4.9e-15 Score=141.49 Aligned_cols=127 Identities=21% Similarity=0.196 Sum_probs=108.6
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 46899999999999987777789999999999999999977777789999999999999999977677789999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccccccCccccCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNL 205 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~~ 205 (619)
|++|++++..+..+..+++|+.|++++|++.+..| ++..|++.+|.+
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~----~l~~L~~~~n~~ 177 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSEWINKH 177 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT----TTHHHHHHHHHC
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCC----CHHHHHHHHHhC
Confidence 99999997666678999999999999999987655 334444444443
No 308
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.57 E-value=2e-15 Score=168.38 Aligned_cols=134 Identities=24% Similarity=0.279 Sum_probs=102.2
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCC---CcccccccccCcEeeecCCCccccCCCcccccccchh
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGE---IPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQF 152 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 152 (619)
.+|+.|+|++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|++|+|++|++++..|..|.++++|+.
T Consensus 425 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 504 (606)
T 3t6q_A 425 HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNH 504 (606)
T ss_dssp TTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCE
Confidence 4677777777777777777777777777777777777652 2345777788888888888888777778888888888
Q ss_pred hhccCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCCCC
Q 007073 153 LTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 153 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~~~ 210 (619)
|+|++|++++..|..+..+++| .|++++|++++..|..+ .++..+++++|++.|+|+
T Consensus 505 L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 505 VDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred EECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 8888888887777788888888 88888888886666544 456778889999988875
No 309
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.57 E-value=2.9e-15 Score=162.00 Aligned_cols=141 Identities=20% Similarity=0.213 Sum_probs=118.5
Q ss_pred CcceeEEcC----------CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCC
Q 007073 66 TWSNVICDN----------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNR 135 (619)
Q Consensus 66 ~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 135 (619)
.|..|.|.+ ..+++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 356777754 2378999999999998888899999999999999999998888899999999999999999
Q ss_pred ccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCC
Q 007073 136 LVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLN 206 (619)
Q Consensus 136 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~ 206 (619)
|++..+..|.++++|+.|+|++|++++..|..|..+++|+.|++++|++++..|..+. ++..|++++|...
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 9965556788999999999999999977888899999999999999999876665554 5566778888654
No 310
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.57 E-value=3.1e-15 Score=169.22 Aligned_cols=137 Identities=20% Similarity=0.216 Sum_probs=113.2
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCc--------ccccccccCcEeeecCCCccccCCCcccc
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIP--------EELGNLSSLTSLDLDNNRLVGKIPPSLGN 146 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 146 (619)
..+|+.|+|++|++++..+..|..+++|++|+|++|++++..+ ..|.++++|++|+|++|+|+...+..|.+
T Consensus 479 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 558 (680)
T 1ziw_A 479 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKD 558 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccc
Confidence 3578899999999988777788889999999999999885321 23788899999999999999444456899
Q ss_pred cccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCc----cccccCccccCCCCCCCCCCC
Q 007073 147 LKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV----HLFQIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 147 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~----~l~~l~~l~~~~n~~~c~~~~ 211 (619)
+++|+.|+|++|+|++..+..|..+++|+.|++++|++++..|. .+.++..+++++|+|.|+|+.
T Consensus 559 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred ccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 99999999999999966666678999999999999999966554 356788899999999999873
No 311
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.57 E-value=1.2e-15 Score=158.34 Aligned_cols=143 Identities=21% Similarity=0.318 Sum_probs=119.6
Q ss_pred CCCCCcceeEEcC------------CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEe
Q 007073 62 VNPCTWSNVICDN------------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSL 129 (619)
Q Consensus 62 ~~~c~w~gv~c~~------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 129 (619)
..+|.|.|+ |+. ..+|+.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 467889887 653 1379999999999998877799999999999999999998788889999999999
Q ss_pred eecCCCccccCCCcccccccchhhhccCCcCCCCCCC--ccccccccccccCCCCc-ccccCCcccc---ccCccccCCC
Q 007073 130 DLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPD--SLTTLSSLISIQLDSNN-LSGQIPVHLF---QIPKYNFTGN 203 (619)
Q Consensus 130 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~-l~~~~p~~l~---~l~~l~~~~n 203 (619)
+|++|+|++..+..|.++++|++|+|++|+++ .+|. .+..+++|+.|++++|+ +++..|..+. ++..|++++|
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 99999999544445899999999999999999 5665 78899999999999995 6644455554 5566788888
Q ss_pred CCC
Q 007073 204 NLN 206 (619)
Q Consensus 204 ~~~ 206 (619)
...
T Consensus 185 ~l~ 187 (353)
T 2z80_A 185 DLQ 187 (353)
T ss_dssp TCC
T ss_pred CcC
Confidence 764
No 312
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=4.6e-15 Score=136.87 Aligned_cols=108 Identities=29% Similarity=0.312 Sum_probs=95.6
Q ss_pred EEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCC
Q 007073 79 ASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQN 158 (619)
Q Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 158 (619)
+.|++++|+++ .+|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 57888999998 466655 489999999999999888999999999999999999999777777899999999999999
Q ss_pred cCCCCCCCccccccccccccCCCCcccccCC
Q 007073 159 NFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 189 (619)
Q Consensus 159 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 189 (619)
+|++..+..|..+++|+.|+|++|+++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9997666679999999999999999985443
No 313
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.56 E-value=2.6e-15 Score=157.96 Aligned_cols=151 Identities=17% Similarity=0.219 Sum_probs=116.3
Q ss_pred CCCCCCCCCCCCC----cceeEEcC-----------------CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCC
Q 007073 54 LRDWNQNQVNPCT----WSNVICDN-----------------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGI 112 (619)
Q Consensus 54 l~~w~~~~~~~c~----w~gv~c~~-----------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 112 (619)
+++|... .+||. |.++.|+. ..+++.|++++|.++...+..|..+++|++|+|++|.+
T Consensus 3 ~~~~~~~-~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i 81 (390)
T 3o6n_A 3 VKPRQPE-YKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 81 (390)
T ss_dssp ----CCE-ECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCC
T ss_pred cCCCCCc-cceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcc
Confidence 5678763 56663 55544441 25788999999999866666678899999999999999
Q ss_pred CCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCC-ccccccccccccCCCCcccccCCcc
Q 007073 113 TGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPD-SLTTLSSLISIQLDSNNLSGQIPVH 191 (619)
Q Consensus 113 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~ 191 (619)
++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|. .|..+++|+.|++++|++++..|..
T Consensus 82 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 160 (390)
T 3o6n_A 82 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDT 160 (390)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTT
T ss_pred cccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhh
Confidence 9777778999999999999999999877888999999999999999999 4554 4688999999999999998666655
Q ss_pred cc---ccCccccCCCCCC
Q 007073 192 LF---QIPKYNFTGNNLN 206 (619)
Q Consensus 192 l~---~l~~l~~~~n~~~ 206 (619)
+. ++..|++++|...
T Consensus 161 ~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 161 FQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp TSSCTTCCEEECCSSCCS
T ss_pred ccCCCCCCEEECCCCcCC
Confidence 54 5666788888764
No 314
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.56 E-value=5.4e-15 Score=136.93 Aligned_cols=110 Identities=22% Similarity=0.251 Sum_probs=96.1
Q ss_pred EEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCC
Q 007073 79 ASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQN 158 (619)
Q Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 158 (619)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 6676664 89999999999999888999999999999999999999765666899999999999999
Q ss_pred cCCCCCCCccccccccccccCCCCcccccCCccc
Q 007073 159 NFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL 192 (619)
Q Consensus 159 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l 192 (619)
+|++..+..|..+++|+.|+|++|++. ..|..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~-c~~~~~ 124 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD-CECRDI 124 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC-TTBGGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc-cccccH
Confidence 999655556999999999999999998 445433
No 315
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.56 E-value=1e-15 Score=165.65 Aligned_cols=136 Identities=18% Similarity=0.190 Sum_probs=115.3
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|+.|+|++|.+.+.+|..+....+|+.|+|++|+|++..+..+.++++|+.|+|++|.|++..+..|.++++|+.|+|
T Consensus 200 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (477)
T 2id5_A 200 YRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQL 279 (477)
T ss_dssp TTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEEC
T ss_pred cccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEEC
Confidence 46777777777777677766666678888888889998555567999999999999999999888888999999999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKTL 211 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~~~~ 211 (619)
++|++++..|..|..+++|+.|+|++|++++..+..+ .++..|++++|++.|+|..
T Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~ 338 (477)
T 2id5_A 280 VGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL 338 (477)
T ss_dssp CSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG
T ss_pred CCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch
Confidence 9999998889999999999999999999995444444 4677889999999999863
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=2.4e-15 Score=153.62 Aligned_cols=138 Identities=23% Similarity=0.298 Sum_probs=102.9
Q ss_pred ceeEEcCCCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccc-cccccCcEeeecCCCccccCCCcccc
Q 007073 68 SNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEEL-GNLSSLTSLDLDNNRLVGKIPPSLGN 146 (619)
Q Consensus 68 ~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~ 146 (619)
.++.+....+|+.|+|++|++++..+..+..+++|++|+|++|++++..|..+ ..+++|++|+|++|+|++. |. ...
T Consensus 112 ~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~ 189 (317)
T 3o53_A 112 SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVV 189 (317)
T ss_dssp SEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCC
T ss_pred CCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccc
Confidence 34444555677888888888887777778888888888888888886666666 3678888888888888844 33 334
Q ss_pred cccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCCCC
Q 007073 147 LKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGK 209 (619)
Q Consensus 147 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c~~ 209 (619)
+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++ .+|..+. ++..|++++|++.|++
T Consensus 190 l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~ 253 (317)
T 3o53_A 190 FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253 (317)
T ss_dssp CTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHH
T ss_pred cccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcC
Confidence 788888888888888 55666888888888888888888 5776553 5566778888887654
No 317
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.55 E-value=4.5e-15 Score=165.49 Aligned_cols=132 Identities=21% Similarity=0.188 Sum_probs=115.6
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+++.|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47999999999999888999999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCccccc-CCcc--ccccCccccCCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQ-IPVH--LFQIPKYNFTGNNLNC 207 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~--l~~l~~l~~~~n~~~c 207 (619)
++|++++..|..+..+++|++|++++|++++. +|.. +.++..|++++|....
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc
Confidence 99999976678899999999999999999862 3432 3567778888887653
No 318
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.55 E-value=2.6e-15 Score=170.16 Aligned_cols=112 Identities=32% Similarity=0.463 Sum_probs=58.2
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
.|+.|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|+.|+|+
T Consensus 225 ~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~ 301 (727)
T 4b8c_D 225 LWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFF 301 (727)
T ss_dssp CCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECC
T ss_pred CCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECC
Confidence 3445555555554 44444445555555555555555 45555555555555555555555 445555555555555555
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccccCCccc
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL 192 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l 192 (619)
+|.|+ .+|..|..|++|+.|+|++|+|++.+|..+
T Consensus 302 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 302 DNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp SSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred CCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 55554 445555555555555555555555444444
No 319
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.55 E-value=7.7e-15 Score=157.54 Aligned_cols=142 Identities=23% Similarity=0.241 Sum_probs=122.1
Q ss_pred cceeEEcCC----------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCc
Q 007073 67 WSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRL 136 (619)
Q Consensus 67 w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 136 (619)
|..+.|.+. .+++.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 567888642 4799999999999999999999999999999999999988889999999999999999999
Q ss_pred cccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCc----cccccCccccCCCCCCCC
Q 007073 137 VGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV----HLFQIPKYNFTGNNLNCG 208 (619)
Q Consensus 137 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~----~l~~l~~l~~~~n~~~c~ 208 (619)
++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|+..+.+|. .+.++..|++++|.....
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 976677799999999999999999966666889999999999999555446764 345677788998877543
No 320
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.55 E-value=3.6e-15 Score=164.87 Aligned_cols=136 Identities=22% Similarity=0.271 Sum_probs=105.8
Q ss_pred CCCeEEEEeCCCCccccCC-ccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCcc-ccCCCcccccccchh
Q 007073 75 SNNVASVTLSSMNFSGTLS-PRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLV-GKIPPSLGNLKKLQF 152 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~ 152 (619)
..+|+.|+|++|.+.+..+ ..+..+++|++|+|++|.+++..|..+.++++|++|+|++|.++ +.+|..+..+++|+.
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 3466667777777765554 45777888888888888888777777888888888888888887 568888888888888
Q ss_pred hhccCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCCCCC
Q 007073 153 LTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 153 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c~~~ 210 (619)
|+|++|++++..|..+..+++|+.|++++|++++..|..+. ++..|++++|++.|.|+
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 88888888877788888888888888888888866555444 45667788888888875
No 321
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.55 E-value=3.1e-15 Score=163.60 Aligned_cols=134 Identities=23% Similarity=0.330 Sum_probs=84.7
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCC--CCcccccccccCcEeeecCCCccccCCCc-ccccc---
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITG--EIPEELGNLSSLTSLDLDNNRLVGKIPPS-LGNLK--- 148 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~--- 148 (619)
..+|+.|+|++|.+++.+|..+..+++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +..++
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4567777777777776667677777777777777777764 34455666777777777777766534432 44444
Q ss_pred -------------------cchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCcc-c---cccCccccCCCCC
Q 007073 149 -------------------KLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH-L---FQIPKYNFTGNNL 205 (619)
Q Consensus 149 -------------------~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-l---~~l~~l~~~~n~~ 205 (619)
+|+.|+|++|+|+ .+|..+..+++|+.|++++|+++ .+|.. + .++..|++++|++
T Consensus 403 ~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPW 480 (520)
T ss_dssp EEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCB
T ss_pred EEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCC
Confidence 5555555555555 55655566667777777777776 45543 3 3445566777777
Q ss_pred CCCCC
Q 007073 206 NCGKT 210 (619)
Q Consensus 206 ~c~~~ 210 (619)
.|+|+
T Consensus 481 ~c~c~ 485 (520)
T 2z7x_B 481 DCSCP 485 (520)
T ss_dssp CCCHH
T ss_pred cccCC
Confidence 76664
No 322
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.55 E-value=4.4e-15 Score=171.92 Aligned_cols=141 Identities=21% Similarity=0.235 Sum_probs=92.2
Q ss_pred CCcceeEEcCCCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCC-cccccccccCcEeeecCCCccccCCCc
Q 007073 65 CTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEI-PEELGNLSSLTSLDLDNNRLVGKIPPS 143 (619)
Q Consensus 65 c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~ 143 (619)
|.|..|.+ ...+++.|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+|++..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 34555555 4457777777777777777777777777777777777555454 566777777777777777777666777
Q ss_pred ccccccchhhhccCCcCCCCCCCc--cccccccccccCCCCcccccCC-ccc---cccCccccCCCCCC
Q 007073 144 LGNLKKLQFLTLSQNNFSGTIPDS--LTTLSSLISIQLDSNNLSGQIP-VHL---FQIPKYNFTGNNLN 206 (619)
Q Consensus 144 ~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p-~~l---~~l~~l~~~~n~~~ 206 (619)
|+++++|++|+|++|.+++.+|.. +..+++|+.|+|++|++++..| ..+ .+|..|++++|.+.
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 777777777777777776655544 6677777777777777765443 233 34444556666543
No 323
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.54 E-value=5.9e-15 Score=163.02 Aligned_cols=134 Identities=23% Similarity=0.326 Sum_probs=89.3
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCC--CcccccccccCcEeeecCCCccccCCCc-cccc----
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGE--IPEELGNLSSLTSLDLDNNRLVGKIPPS-LGNL---- 147 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l---- 147 (619)
..+|+.|+|++|.+++.+|..+..+++|++|+|++|++++. +|..+.++++|++|+|++|++++.+|.. +..+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 44666667777666666666666666666666666666642 2345666666666666666666534432 3333
Q ss_pred ------------------ccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCcc-cc---ccCccccCCCCC
Q 007073 148 ------------------KKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH-LF---QIPKYNFTGNNL 205 (619)
Q Consensus 148 ------------------~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-l~---~l~~l~~~~n~~ 205 (619)
++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ .+|.. +. ++..|++++|++
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~ 509 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPW 509 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCB
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCc
Confidence 56777777777777 67777778888888888888888 67754 43 455677888888
Q ss_pred CCCCC
Q 007073 206 NCGKT 210 (619)
Q Consensus 206 ~c~~~ 210 (619)
.|+|+
T Consensus 510 ~c~c~ 514 (562)
T 3a79_B 510 DCTCP 514 (562)
T ss_dssp CCCHH
T ss_pred CCCcc
Confidence 88875
No 324
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.54 E-value=1.1e-14 Score=149.58 Aligned_cols=140 Identities=22% Similarity=0.307 Sum_probs=121.0
Q ss_pred CCcceeEEcCC----------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCC
Q 007073 65 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 134 (619)
Q Consensus 65 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 134 (619)
|.|..+.|++. .+++.|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 68999999742 37999999999999888889999999999999999999888999999999999999999
Q ss_pred CccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCccc--ccCCcccc--ccCccccCCCCCCC
Q 007073 135 RLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLS--GQIPVHLF--QIPKYNFTGNNLNC 207 (619)
Q Consensus 135 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~l~--~l~~l~~~~n~~~c 207 (619)
+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|+++ +..|..+. ++..|++++|....
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 186 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc
Confidence 999 7787766 89999999999999665667899999999999999996 35555554 67778888887643
No 325
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.54 E-value=4e-15 Score=152.77 Aligned_cols=127 Identities=29% Similarity=0.362 Sum_probs=67.0
Q ss_pred CCeEEEEeCCCCccc--cCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 76 NNVASVTLSSMNFSG--TLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
.+|+.|+|++|.+.. ..+..+..+++|+.|++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|+.|
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 355666666665542 44555555555555555555555 3443332 455555555555554445555555555555
Q ss_pred hccCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLN 206 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~ 206 (619)
+|++|++++..+..+..+++|+.|++++|+++ .+|..+. ++..|++++|++.
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~ 276 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 276 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCC
Confidence 55555555444445555555555555555555 4554333 2333445555443
No 326
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.53 E-value=4.3e-15 Score=140.66 Aligned_cols=124 Identities=23% Similarity=0.346 Sum_probs=69.3
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+|+.|+|++|+++ .+| .+..+++|++|+|++|.++ .++ .+..+++|++|+|++|++++..|..|+.+++|+.|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 5566666666665 333 4555666666666666554 222 45556666666666666665555556666666666666
Q ss_pred CCcCCCCCCCccccccccccccCCCCc-ccccCCc--cccccCccccCCCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNN-LSGQIPV--HLFQIPKYNFTGNNL 205 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~--~l~~l~~l~~~~n~~ 205 (619)
+|++++..|..+..+++|+.|++++|+ ++ .+|. .+.++..|++++|..
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGGGGGCSSCCEEECTTBCC
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHhhcCCCCCCEEECCCCCC
Confidence 666655455555566666666666665 33 4441 223344455555544
No 327
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.53 E-value=7.9e-15 Score=148.87 Aligned_cols=128 Identities=21% Similarity=0.274 Sum_probs=60.0
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCc-ccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIP-EELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
+|+.|+|++|.+. .+|..+..+++|++|+|++|++++..+ ..+.++++|++|+|++|.+++..|..|.++++|+.|+|
T Consensus 79 ~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 79 SLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp CCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 4555555555554 233344455555555555555543322 24444555555555555554444444445555555555
Q ss_pred cCCcCCC-CCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCC
Q 007073 156 SQNNFSG-TIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNL 205 (619)
Q Consensus 156 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~ 205 (619)
++|.+++ .+|..+..+++|+.|++++|++++..|..+. ++..|++++|.+
T Consensus 158 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 211 (306)
T 2z66_A 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211 (306)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCcc
Confidence 5555443 2444444455555555555555433333332 233344444443
No 328
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.53 E-value=1.6e-14 Score=151.82 Aligned_cols=132 Identities=24% Similarity=0.206 Sum_probs=116.9
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+++...+..|.++++|++|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 35899999999999988888999999999999999999988888899999999999999999944444579999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccccccCccccCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLN 206 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~~~ 206 (619)
|++|++++..|..+..+++|+.|++++|++++.-...+.++..|++++|...
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccc
Confidence 9999999777888999999999999999999654466778888888888654
No 329
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.53 E-value=1.4e-14 Score=163.73 Aligned_cols=131 Identities=19% Similarity=0.227 Sum_probs=98.8
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.++++|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 36888888888888777777888888888888888888777777888888888888888888544446788888888888
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCcccc---ccCccccCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLN 206 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~ 206 (619)
++|++++..|..|..+++|++|++++|++++..|..+. ++..|++++|...
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 158 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQ 158 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccc
Confidence 88888766667778888888888888888766665443 4555667776553
No 330
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.53 E-value=4.2e-15 Score=165.34 Aligned_cols=131 Identities=18% Similarity=0.240 Sum_probs=114.5
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|+.|+|++|++++. +.+..+++|+.|+|++|.|++.+|..|+++++|+.|+|++|+|++ +|..+..+++|+.|+|
T Consensus 232 ~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L 308 (597)
T 3oja_B 232 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 308 (597)
T ss_dssp SCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEEC
Confidence 4688888888888863 678899999999999999998889999999999999999999994 6888888999999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCccccccCccccCCCCCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~~~c~~~ 210 (619)
++|.++ .+|..+..+++|+.|+|++|++++..+..+.++..|++++|++.|.+.
T Consensus 309 s~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 309 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHHH
T ss_pred CCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCChhH
Confidence 999999 788888899999999999999996555677788899999999998763
No 331
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.52 E-value=2.5e-15 Score=168.34 Aligned_cols=130 Identities=19% Similarity=0.327 Sum_probs=117.3
Q ss_pred CCCeEEEEeCCCCcccc-----------------CCcccc--CCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCC
Q 007073 75 SNNVASVTLSSMNFSGT-----------------LSPRIG--VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNR 135 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 135 (619)
..+|++|+|++|.+++. +|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 56899999999999986 899999 99999999999999999999999999999999999998
Q ss_pred -ccc-cCCCccccc------ccchhhhccCCcCCCCCCC--ccccccccccccCCCCcccccCCcccc---ccCccccCC
Q 007073 136 -LVG-KIPPSLGNL------KKLQFLTLSQNNFSGTIPD--SLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTG 202 (619)
Q Consensus 136 -l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~ 202 (619)
++| .+|..++++ ++|+.|+|++|+++ .+|. .+..+++|+.|++++|+++|.+| .+. ++..|++++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 998 899988887 99999999999999 8998 89999999999999999999999 554 566678888
Q ss_pred CCCC
Q 007073 203 NNLN 206 (619)
Q Consensus 203 n~~~ 206 (619)
|.+.
T Consensus 363 N~l~ 366 (636)
T 4eco_A 363 NQIT 366 (636)
T ss_dssp SEEE
T ss_pred Cccc
Confidence 8765
No 332
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.52 E-value=3.6e-15 Score=169.03 Aligned_cols=170 Identities=20% Similarity=0.221 Sum_probs=109.1
Q ss_pred chhHHHHHHHHHhcCCC-CCCCCCCCCCCCCCCCcceeEE-----------------cCCCCeEEEEeCCCCccc-----
Q 007073 34 SLSGDALFALRTSLRVP-NNQLRDWNQNQVNPCTWSNVIC-----------------DNSNNVASVTLSSMNFSG----- 90 (619)
Q Consensus 34 ~~~~~al~~~k~~l~~~-~~~l~~w~~~~~~~c~w~gv~c-----------------~~~~~l~~L~L~~n~l~~----- 90 (619)
..+..+|+.+...+..+ .+.-..|......++.|.+.++ .....+..++|++|.|.+
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~~ 210 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDIE 210 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCccccc
Confidence 33677888888666321 1222345444444455654332 122356666666666654
Q ss_pred ----cCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCC
Q 007073 91 ----TLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPD 166 (619)
Q Consensus 91 ----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 166 (619)
..+..+..+++|+.|+|++|+|. .+|..+.++++|++|+|++|.|+ .+|..|++|++|+.|+|++|+|+ .+|.
T Consensus 211 n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~ 287 (727)
T 4b8c_D 211 NRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPA 287 (727)
T ss_dssp -----------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCS
T ss_pred cceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccCh
Confidence 44778899999999999999999 88888889999999999999999 89999999999999999999999 8899
Q ss_pred ccccccccccccCCCCcccccCCcccc---ccCccccCCCCCCC
Q 007073 167 SLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNC 207 (619)
Q Consensus 167 ~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~~~n~~~c 207 (619)
.|..|++|+.|+|++|.|+ .+|..|. +|..|++++|++..
T Consensus 288 ~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 288 ELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp SGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCS
T ss_pred hhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCC
Confidence 9999999999999999998 8997665 55667899998764
No 333
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.52 E-value=1.8e-14 Score=154.17 Aligned_cols=141 Identities=25% Similarity=0.227 Sum_probs=117.9
Q ss_pred cceeEEcC----------CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCc
Q 007073 67 WSNVICDN----------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRL 136 (619)
Q Consensus 67 w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 136 (619)
|..|.|.+ ..+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 56777764 24789999999999988889999999999999999999977788899999999999999999
Q ss_pred cccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCc-c---ccccCccccCCCCCCC
Q 007073 137 VGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV-H---LFQIPKYNFTGNNLNC 207 (619)
Q Consensus 137 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~---l~~l~~l~~~~n~~~c 207 (619)
++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+..+.+|. . +.++..|++++|....
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 966666899999999999999999966666888999999999998555446664 2 4466777888887653
No 334
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=8.5e-15 Score=135.91 Aligned_cols=125 Identities=18% Similarity=0.240 Sum_probs=103.4
Q ss_pred CCCeEEEEeCCCCccccCCccccCCC-CCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLR-TLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
..+|+.|+|++|+++. +|. +..+. +|+.|+|++|+|++. ..+..+++|++|+|++|+|++..+..|..+++|+.|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 3589999999999995 454 55555 999999999999954 579999999999999999996544556999999999
Q ss_pred hccCCcCCCCCCC--ccccccccccccCCCCcccccCCcc----ccc---cCccccCCCCC
Q 007073 154 TLSQNNFSGTIPD--SLTTLSSLISIQLDSNNLSGQIPVH----LFQ---IPKYNFTGNNL 205 (619)
Q Consensus 154 ~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~----l~~---l~~l~~~~n~~ 205 (619)
+|++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. +.. +..|++.+|..
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 99999997 6776 8899999999999999998 67764 544 45566666653
No 335
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.52 E-value=2.9e-15 Score=152.66 Aligned_cols=132 Identities=18% Similarity=0.238 Sum_probs=108.4
Q ss_pred CCCeEEEEeCCCCccccCCccc--cCCCCCCEEEccCCCCCCCCccccccc-----ccCcEeeecCCCccccCCCccccc
Q 007073 75 SNNVASVTLSSMNFSGTLSPRI--GVLRTLSTLTLKGNGITGEIPEELGNL-----SSLTSLDLDNNRLVGKIPPSLGNL 147 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l 147 (619)
..+|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|+|++..|..|+++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 4589999999999998888876 8899999999999999966 8888887 899999999999998777899999
Q ss_pred ccchhhhccCCcCCCC--CCCcc--ccccccccccCCCCcccc--cCCcc----ccccCccccCCCCCCC
Q 007073 148 KKLQFLTLSQNNFSGT--IPDSL--TTLSSLISIQLDSNNLSG--QIPVH----LFQIPKYNFTGNNLNC 207 (619)
Q Consensus 148 ~~L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~--~~p~~----l~~l~~l~~~~n~~~c 207 (619)
++|+.|+|++|++.+. +|..+ ..+++|+.|+|++|++++ .++.. +.++..|++++|.+..
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 242 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRD 242 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCS
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCc
Confidence 9999999999998765 33344 788899999999999983 23322 3578888899887754
No 336
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.51 E-value=1.1e-14 Score=137.93 Aligned_cols=126 Identities=21% Similarity=0.320 Sum_probs=109.6
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|.++. ++.+..+++|++|+|++|++++..|..++++++|++|+|++|++++..|..++++++|+.|+
T Consensus 65 l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 4589999999997763 34789999999999999999987888999999999999999999988889999999999999
Q ss_pred ccCCc-CCCCCCCccccccccccccCCCCcccccCC--ccccccCccccCCCCC
Q 007073 155 LSQNN-FSGTIPDSLTTLSSLISIQLDSNNLSGQIP--VHLFQIPKYNFTGNNL 205 (619)
Q Consensus 155 l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~l~~l~~l~~~~n~~ 205 (619)
|++|+ ++ .+| .+..+++|+.|++++|++++ +| ..+.++..|++.+|++
T Consensus 143 L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 143 LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEEEECBC--
T ss_pred ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEEEeeCccc
Confidence 99998 66 666 68999999999999999995 54 3455677788999875
No 337
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.51 E-value=1.3e-14 Score=159.46 Aligned_cols=108 Identities=24% Similarity=0.361 Sum_probs=99.7
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
.|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|+++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58899999999996 565 999999999999999999 889999999999999999999995 77 89999999999999
Q ss_pred CCcCCCCC-CCccccccccccccCCCCcccccCC
Q 007073 157 QNNFSGTI-PDSLTTLSSLISIQLDSNNLSGQIP 189 (619)
Q Consensus 157 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p 189 (619)
+|+|++.. |..+..+++|+.|+|++|++++..|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999776 9999999999999999999996554
No 338
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.51 E-value=1.7e-14 Score=148.26 Aligned_cols=107 Identities=21% Similarity=0.321 Sum_probs=58.2
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCC--CCCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGIT--GEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
.+|++|+|++|.+++..+..|..+++|+.|+|++|.++ +..|..+..+ +|++|++++|+++ .+|..+. ++|+.|
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~--~~L~~L 198 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLP--ETLNEL 198 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSC--SSCSCC
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccCcccc--CCCCEE
Confidence 36777777777777655556777777777777777774 2455555554 4444444444444 2333222 344444
Q ss_pred hccCCcCCCCCCCccccccccccccCCCCcccc
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSG 186 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 186 (619)
+|++|++++..|..+..+++|+.|++++|++++
T Consensus 199 ~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 199 HLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp BCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc
Confidence 444454444444444444555555555555543
No 339
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=2.1e-14 Score=132.38 Aligned_cols=106 Identities=18% Similarity=0.278 Sum_probs=93.0
Q ss_pred CCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCC
Q 007073 102 LSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDS 181 (619)
Q Consensus 102 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 181 (619)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 6887664 8999999999999988899999999999999999999976677789999999999999
Q ss_pred CcccccCCccc---cccCccccCCCCCCCCCC
Q 007073 182 NNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 182 N~l~~~~p~~l---~~l~~l~~~~n~~~c~~~ 210 (619)
|+|++..|..+ .++..|++++|++.|.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99996544444 466778999999999985
No 340
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.51 E-value=5.6e-15 Score=150.52 Aligned_cols=131 Identities=18% Similarity=0.235 Sum_probs=83.7
Q ss_pred CCCeEEEEeCCCCccccCCccccCC-----CCCCEEEccCCCCCCCCcccccccccCcEeeecCCCcccc--CCCcc--c
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVL-----RTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGK--IPPSL--G 145 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~ 145 (619)
..+|+.|+|++|++++. |..++.+ ++|++|+|++|+|++..|..|+++++|++|+|++|++.+. +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 34677777777777766 6666666 7777777777777766667777777777777777776654 22233 6
Q ss_pred ccccchhhhccCCcCCC--CCC-CccccccccccccCCCCcccccCCc-c---ccccCccccCCCCCC
Q 007073 146 NLKKLQFLTLSQNNFSG--TIP-DSLTTLSSLISIQLDSNNLSGQIPV-H---LFQIPKYNFTGNNLN 206 (619)
Q Consensus 146 ~l~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~~p~-~---l~~l~~l~~~~n~~~ 206 (619)
++++|+.|+|++|+|++ .++ ..+..+++|+.|++++|++++.+|. . +.++..|++++|...
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 66777777777777762 111 2233556677777777777655532 1 245666666666654
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.51 E-value=1.3e-14 Score=147.68 Aligned_cols=131 Identities=20% Similarity=0.233 Sum_probs=107.5
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCC--Cc--ccccccccCcEeeecCCCccccCCC----cccc
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGE--IP--EELGNLSSLTSLDLDNNRLVGKIPP----SLGN 146 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p--~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~ 146 (619)
..+|+.|+|++|++.+..+..|..+++|++|+|++|++.+. ++ ..+.++++|++|+|++|+|+ .+|. .+.+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 45899999999999988888999999999999999998742 22 23468899999999999997 4444 3577
Q ss_pred cccchhhhccCCcCCCCCCCccccc---cccccccCCCCcccccCCccc-cccCccccCCCCCCC
Q 007073 147 LKKLQFLTLSQNNFSGTIPDSLTTL---SSLISIQLDSNNLSGQIPVHL-FQIPKYNFTGNNLNC 207 (619)
Q Consensus 147 l~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~l-~~l~~l~~~~n~~~c 207 (619)
+++|++|+|++|+|++..|..+..+ ++|+.|+|++|+|+ .+|..+ .++..|++++|....
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCC
Confidence 8999999999999997778877776 69999999999999 778655 478888899988763
No 342
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.51 E-value=3.1e-14 Score=157.36 Aligned_cols=131 Identities=18% Similarity=0.171 Sum_probs=95.0
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+++.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 36777888888887777777777888888888888777666677777788888888888777666677777777888888
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccc-cCCcccc---ccCccccCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSG-QIPVHLF---QIPKYNFTGNNLN 206 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~l~---~l~~l~~~~n~~~ 206 (619)
++|++++..+..+..+++|++|++++|++++ .+|..+. ++..|++++|...
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc
Confidence 7777774444467777777777777777775 3566554 4455667776654
No 343
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.49 E-value=3e-14 Score=146.23 Aligned_cols=139 Identities=22% Similarity=0.331 Sum_probs=118.8
Q ss_pred CCcceeEEcC----------CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCC
Q 007073 65 CTWSNVICDN----------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 134 (619)
Q Consensus 65 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 134 (619)
|.|..+.|++ ..+++.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 5788898874 247999999999999888889999999999999999999888999999999999999999
Q ss_pred CccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccc--cCCcccc---ccCccccCCCCCC
Q 007073 135 RLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSG--QIPVHLF---QIPKYNFTGNNLN 206 (619)
Q Consensus 135 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~l~---~l~~l~~~~n~~~ 206 (619)
+|+ .+|..+. ++|+.|++++|++++..+..+..+++|+.|++++|+++. ..|..+. ++..|++++|...
T Consensus 111 ~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 111 QLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred cCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 999 6787765 799999999999996666778999999999999999963 5555554 5566778888764
No 344
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.49 E-value=3.3e-14 Score=147.00 Aligned_cols=132 Identities=19% Similarity=0.173 Sum_probs=103.9
Q ss_pred CCcceeEEcCCCCeEEEEeCCC-CccccCCccccCCCCCCEEEccC-CCCCCCCcccccccccCcEeeecCCCccccCCC
Q 007073 65 CTWSNVICDNSNNVASVTLSSM-NFSGTLSPRIGVLRTLSTLTLKG-NGITGEIPEELGNLSSLTSLDLDNNRLVGKIPP 142 (619)
Q Consensus 65 c~w~gv~c~~~~~l~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 142 (619)
|.|..+.|+ ++ +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|.
T Consensus 8 C~~~~v~~~-----------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCT-----------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECC-----------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcC-----------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 777766664 44 787 4677 99999999999996 999988788999999999999999999998899
Q ss_pred cccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCC-ccccc---cCccccCCCCCCCCCC
Q 007073 143 SLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQ---IPKYNFTGNNLNCGKT 210 (619)
Q Consensus 143 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~---l~~l~~~~n~~~c~~~ 210 (619)
.|.+|++|+.|+|++|+|++..|..+..++ |+.|+|++|+|...-. .+|.. .....+..+...|..+
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCC
Confidence 999999999999999999955555555555 9999999999984322 12222 2233444566667654
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.49 E-value=1.6e-14 Score=159.54 Aligned_cols=127 Identities=21% Similarity=0.199 Sum_probs=99.2
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+++.|+|++|++++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 47888888888888777778888888888888888888777788888888888888888888 67766 7888888888
Q ss_pred cCCcCCC-CCCCccccccccccccCCCCcccccCCcccccc--CccccCCCCC
Q 007073 156 SQNNFSG-TIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQI--PKYNFTGNNL 205 (619)
Q Consensus 156 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l--~~l~~~~n~~ 205 (619)
++|++++ .+|..|.++++|+.|++++|++++.....+.++ ..|++++|..
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccc
Confidence 8888875 245778888888888888888875433445555 6677777765
No 346
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=4.6e-14 Score=130.61 Aligned_cols=105 Identities=17% Similarity=0.270 Sum_probs=91.3
Q ss_pred CEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCC
Q 007073 103 STLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSN 182 (619)
Q Consensus 103 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 182 (619)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999998 8888775 89999999999999888999999999999999999999655566789999999999999
Q ss_pred cccccCCccc---cccCccccCCCCCCCCCC
Q 007073 183 NLSGQIPVHL---FQIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 183 ~l~~~~p~~l---~~l~~l~~~~n~~~c~~~ 210 (619)
+|++..|..+ .++..|++.+|++.|.|.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9995433334 466778999999999874
No 347
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.48 E-value=2.4e-14 Score=148.49 Aligned_cols=130 Identities=22% Similarity=0.240 Sum_probs=113.5
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCC--cccccccchh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPP--SLGNLKKLQF 152 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~ 152 (619)
..+|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+++ .+|. .|.++++|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 468999999999999988889999999999999999999655566999999999999999999 5665 7999999999
Q ss_pred hhccCC-cCCCCCCCccccccccccccCCCCcccccCCccccc---cCccccCCCCC
Q 007073 153 LTLSQN-NFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQ---IPKYNFTGNNL 205 (619)
Q Consensus 153 L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~---l~~l~~~~n~~ 205 (619)
|++++| .+++..|..+..+++|+.|++++|++++..|..+.+ +..|++++|..
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 999999 477556788999999999999999999887877765 45577887764
No 348
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.47 E-value=2.6e-14 Score=131.49 Aligned_cols=112 Identities=23% Similarity=0.276 Sum_probs=101.0
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCC--Ccccccccchh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIP--PSLGNLKKLQF 152 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~ 152 (619)
..+|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|+|++|+|++ +| ..+..+++|+.
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~ 124 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKS 124 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCE
Confidence 35899999999999976 789999999999999999997789888889999999999999995 44 78999999999
Q ss_pred hhccCCcCCCCCCC----ccccccccccccCCCCcccccCCcc
Q 007073 153 LTLSQNNFSGTIPD----SLTTLSSLISIQLDSNNLSGQIPVH 191 (619)
Q Consensus 153 L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~p~~ 191 (619)
|++++|.+++ +|. .+..+++|+.|++++|.+. .+|..
T Consensus 125 L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 125 LDLFNCEVTN-LNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp EECCSSGGGT-STTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred EEeeCCcCcc-hHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 9999999994 554 7899999999999999998 67754
No 349
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.47 E-value=2.1e-14 Score=146.13 Aligned_cols=132 Identities=18% Similarity=0.175 Sum_probs=108.6
Q ss_pred CCCeEEEEeCCCCccccCC----ccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCcccc--C--CCcccc
Q 007073 75 SNNVASVTLSSMNFSGTLS----PRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGK--I--PPSLGN 146 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~ 146 (619)
..+|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|.++++|++|+|++|++.+. + +..+.+
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4589999999999997655 4456799999999999999988888999999999999999998752 2 233578
Q ss_pred cccchhhhccCCcCCCCCCC----ccccccccccccCCCCcccccCCccc------cccCccccCCCCCCC
Q 007073 147 LKKLQFLTLSQNNFSGTIPD----SLTTLSSLISIQLDSNNLSGQIPVHL------FQIPKYNFTGNNLNC 207 (619)
Q Consensus 147 l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~p~~l------~~l~~l~~~~n~~~c 207 (619)
+++|++|+|++|+++ .+|. .+..+++|+.|+|++|++++.+|..+ .++..|++++|.+..
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~ 265 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ 265 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc
Confidence 999999999999997 4544 24678999999999999998777554 367778899998863
No 350
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.47 E-value=1.5e-14 Score=165.76 Aligned_cols=130 Identities=18% Similarity=0.288 Sum_probs=113.0
Q ss_pred CCCCeEEEEeCCCCccc-----------------cCCcccc--CCCCCCEEEccCCCCCCCCcccccccccCcEeeecCC
Q 007073 74 NSNNVASVTLSSMNFSG-----------------TLSPRIG--VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 134 (619)
Q Consensus 74 ~~~~l~~L~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 134 (619)
+..+|+.|+|++|+|++ .+|..++ ++++|++|+|++|++.+.+|..|+++++|+.|+|++|
T Consensus 446 ~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 446 RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred cCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 35689999999999998 3888887 9999999999999999999999999999999999999
Q ss_pred C-ccc-cCCCcccccc-------cchhhhccCCcCCCCCCC--ccccccccccccCCCCcccccCCcccc---ccCcccc
Q 007073 135 R-LVG-KIPPSLGNLK-------KLQFLTLSQNNFSGTIPD--SLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNF 200 (619)
Q Consensus 135 ~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~l~~ 200 (619)
+ |+| .+|..+++++ +|+.|+|++|+++ .+|. .+..+++|+.|+|++|+++ .+| .+. ++..|++
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~L 602 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKL 602 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEEC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEEC
Confidence 8 998 7888777766 9999999999999 8888 8899999999999999998 888 554 4566778
Q ss_pred CCCCCC
Q 007073 201 TGNNLN 206 (619)
Q Consensus 201 ~~n~~~ 206 (619)
++|.+.
T Consensus 603 s~N~l~ 608 (876)
T 4ecn_A 603 DYNQIE 608 (876)
T ss_dssp CSSCCS
T ss_pred cCCccc
Confidence 888765
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.47 E-value=1.9e-14 Score=157.52 Aligned_cols=136 Identities=25% Similarity=0.388 Sum_probs=112.6
Q ss_pred CCCCCCCCCCCC-----Cccee-EEcCCCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCc
Q 007073 54 LRDWNQNQVNPC-----TWSNV-ICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLT 127 (619)
Q Consensus 54 l~~w~~~~~~~c-----~w~gv-~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 127 (619)
+.+|.. +.+|| .|.|+ .|.. ++|+.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+| ..+++|+
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhc-cCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCC
Confidence 446754 45778 79999 6864 489999999999997 66655 488999999999999 777 4579999
Q ss_pred EeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCccccccCccccCCCCCCC
Q 007073 128 SLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLNC 207 (619)
Q Consensus 128 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~~~c 207 (619)
+|+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|..+.++..|++++|.+..
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCCC
Confidence 99999999996 777 665 89999999999995 776 67899999999999994 88877788889999988654
No 352
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.47 E-value=3e-14 Score=139.08 Aligned_cols=127 Identities=16% Similarity=0.194 Sum_probs=102.0
Q ss_pred CCCeEEEEeCCCC-ccccCCccccCCCCCCEEEccC-CCCCCCCcccccccccCcEeeecCCCccccCCCcccccccch-
Q 007073 75 SNNVASVTLSSMN-FSGTLSPRIGVLRTLSTLTLKG-NGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQ- 151 (619)
Q Consensus 75 ~~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~- 151 (619)
..+|+.|+|++|+ ++++.+..|..+++|++|+|++ |+|++..+..|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 4578899999986 8877777888899999999988 88886666778888999999999998884 776 78888887
Q ss_pred --hhhccCC-cCCCCCCCccccccccc-cccCCCCcccccCCccc---cccCccccCCCC
Q 007073 152 --FLTLSQN-NFSGTIPDSLTTLSSLI-SIQLDSNNLSGQIPVHL---FQIPKYNFTGNN 204 (619)
Q Consensus 152 --~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~ 204 (619)
.|++++| ++++..+..|..+++|+ .|++++|+++ .+|... .++..|++++|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 8899998 88855556688888888 8999999888 677543 256677888884
No 353
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.47 E-value=1.5e-14 Score=158.26 Aligned_cols=127 Identities=23% Similarity=0.209 Sum_probs=111.6
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|+.|+|++|++++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 58999999999999888889999999999999999999877889999999999999999999 67766 8999999999
Q ss_pred cCCcCCC-CCCCccccccccccccCCCCcccccCCcccccc--CccccCCCCC
Q 007073 156 SQNNFSG-TIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQI--PKYNFTGNNL 205 (619)
Q Consensus 156 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l--~~l~~~~n~~ 205 (619)
++|++++ .+|..+..+++|+.|++++|++++.....+.++ ..|++++|..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTT
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccc
Confidence 9999986 478899999999999999999987444556666 7788888876
No 354
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.44 E-value=7.5e-14 Score=153.60 Aligned_cols=130 Identities=22% Similarity=0.209 Sum_probs=109.3
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccc-cCCCcccccccchhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVG-KIPPSLGNLKKLQFL 153 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L 153 (619)
..+|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 4589999999999998888899999999999999999998777789999999999999999986 357789999999999
Q ss_pred hccCCcCCCCCC-CccccccccccccCCCCcccccCCcccccc---CccccCCCC
Q 007073 154 TLSQNNFSGTIP-DSLTTLSSLISIQLDSNNLSGQIPVHLFQI---PKYNFTGNN 204 (619)
Q Consensus 154 ~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l---~~l~~~~n~ 204 (619)
++++|++.+.+| ..+..+++|+.|++++|++++.+|..+.++ ..|++.+|.
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 183 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSE 183 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSB
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCc
Confidence 999998555665 578999999999999999998888765543 334444444
No 355
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.43 E-value=3.8e-14 Score=153.39 Aligned_cols=122 Identities=20% Similarity=0.117 Sum_probs=68.9
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|.+++.+| +..+++|++|+|++|.|++ +|. .++|++|+|++|.|++..+. .+++|+.|+
T Consensus 57 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~~----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~ 126 (487)
T 3oja_A 57 FTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LLV----GPSIETLHAANNNISRVSCS---RGQGKKNIY 126 (487)
T ss_dssp CTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EEE----CTTCCEEECCSSCCCCEEEC---CCSSCEEEE
T ss_pred CCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CCC----CCCcCEEECcCCcCCCCCcc---ccCCCCEEE
Confidence 3467777777777766554 6677777777777776663 221 13444444444444433222 235566666
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccc----cccCccccCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL----FQIPKYNFTGNNLN 206 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l----~~l~~l~~~~n~~~ 206 (619)
|++|.|++..|..+..+++|+.|+|++|++++.+|..+ .++..|++++|.+.
T Consensus 127 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 127 LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 66666665555566666666666666666665555433 34455556665543
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.43 E-value=1.8e-13 Score=137.73 Aligned_cols=125 Identities=25% Similarity=0.389 Sum_probs=97.5
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|++++..+ +..+++|++|+|++|++++ +|. +..+++|++|+|++|+|++ + +.+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 4588899999998886544 8888999999999998884 444 8888899999999998885 3 4688888899999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCC-ccccccCccccCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNLNC 207 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~l~~~~n~~~c 207 (619)
|++|++++. ..+..+++|+.|++++|++++..| ..+.++..|++++|.+..
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC
Confidence 999988854 567888889999999998885444 233456667788887643
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.41 E-value=1.6e-13 Score=135.99 Aligned_cols=100 Identities=25% Similarity=0.341 Sum_probs=45.4
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+|+.|++++|+++. ++ .+..+++|+.|+|++|+|++ +|. +.++++|++|+|++|+|++ +|.... ++|+.|+|+
T Consensus 42 ~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~ 114 (263)
T 1xeu_A 42 GVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLD 114 (263)
T ss_dssp TCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECC
T ss_pred cCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEcc
Confidence 44455555554442 22 34445555555555555542 222 4445555555555555542 332211 445555555
Q ss_pred CCcCCCCCCCccccccccccccCCCCccc
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLS 185 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 185 (619)
+|+|++ +| .+..+++|+.|++++|+++
T Consensus 115 ~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 115 NNELRD-TD-SLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp SSCCSB-SG-GGTTCTTCCEEECTTSCCC
T ss_pred CCccCC-Ch-hhcCcccccEEECCCCcCC
Confidence 555442 22 3444445555555555544
No 358
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.41 E-value=1.5e-13 Score=139.61 Aligned_cols=128 Identities=27% Similarity=0.424 Sum_probs=103.4
Q ss_pred CCCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 74 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 74 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
...+|+.|+|++|.+++. +.+..+++|+.|+|++|++++ +|. +..+++|++|+|++|++++. +. +.++++|+.|
T Consensus 83 ~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L 156 (308)
T 1h6u_A 83 NLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYL 156 (308)
T ss_dssp TCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEE
T ss_pred cCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEE
Confidence 356899999999999864 368899999999999999985 554 88999999999999999954 43 8899999999
Q ss_pred hccCCcCCCCCCCccccccccccccCCCCcccccCC-ccccccCccccCCCCCCCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNLNCGK 209 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~l~~~~n~~~c~~ 209 (619)
+|++|++++ ++. +..+++|+.|++++|++++..| ..+.++..|++++|......
T Consensus 157 ~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 157 SIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp ECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCG
T ss_pred EccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCccc
Confidence 999999985 444 8889999999999999985333 24456777888888876443
No 359
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.41 E-value=4.2e-13 Score=132.99 Aligned_cols=124 Identities=26% Similarity=0.333 Sum_probs=105.0
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|++++..+ +..+++|+.|+|++|++++ +|. +.. ++|+.|+|++|+|++ ++ .+.++++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 4689999999999997655 9999999999999999995 555 333 999999999999995 44 699999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCC--ccccccCccccCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP--VHLFQIPKYNFTGNNLNCG 208 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~l~~l~~l~~~~n~~~c~ 208 (619)
|++|+|++ +| .+..+++|+.|++++|++++. + ..+.++..|++++|++.+.
T Consensus 135 Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 99999994 55 689999999999999999965 3 2345667788999987654
No 360
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.40 E-value=7.9e-14 Score=125.45 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=93.8
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCcccc-CCCcccccccchhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGK-IPPSLGNLKKLQFL 153 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 153 (619)
..+|+.|+|++|++++. ..+..+++|++|+|++|++++.+|..+.++++|++|+|++|++++. .+..+..+++|+.|
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 46899999999999976 7899999999999999999987999888999999999999999963 34889999999999
Q ss_pred hccCCcCCCCCC---CccccccccccccCCC
Q 007073 154 TLSQNNFSGTIP---DSLTTLSSLISIQLDS 181 (619)
Q Consensus 154 ~l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 181 (619)
++++|++++..+ ..+..+++|+.|++++
T Consensus 119 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 119 DLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred eCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999995544 3788999999999874
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.40 E-value=2.5e-13 Score=136.72 Aligned_cols=125 Identities=29% Similarity=0.393 Sum_probs=107.0
Q ss_pred CCCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 74 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 74 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
...+|+.|+|++|.+++. + .+..+++|++|+|++|++++ ++ .+..+++|+.|+|++|++++. ..+..+++|+.|
T Consensus 88 ~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~L~~n~i~~-~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 161 (291)
T 1h6t_A 88 NLKNLGWLFLDENKVKDL-S-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 161 (291)
T ss_dssp TCTTCCEEECCSSCCCCG-G-GGTTCTTCCEEECTTSCCCC-CG-GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred cCCCCCEEECCCCcCCCC-h-hhccCCCCCEEECCCCcCCC-Ch-hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEE
Confidence 456899999999999863 3 49999999999999999995 44 589999999999999999954 689999999999
Q ss_pred hccCCcCCCCCCCccccccccccccCCCCcccccCCc--cccccCccccCCCCCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLNC 207 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~l~~l~~l~~~~n~~~c 207 (619)
+|++|++++..| +..+++|+.|++++|+++ .+|. .+.++..|++++|+..+
T Consensus 162 ~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~-~l~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 162 SLEDNQISDIVP--LAGLTKLQNLYLSKNHIS-DLRALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-BCGGGTTCTTCSEEEEEEEEEEC
T ss_pred EccCCccccchh--hcCCCccCEEECCCCcCC-CChhhccCCCCCEEECcCCcccC
Confidence 999999996544 899999999999999999 4663 34466778889887653
No 362
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=1.8e-13 Score=141.40 Aligned_cols=105 Identities=22% Similarity=0.313 Sum_probs=93.7
Q ss_pred CEEEccCC-CCCCCCcccccccccCcEeeecC-CCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCC
Q 007073 103 STLTLKGN-GITGEIPEELGNLSSLTSLDLDN-NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLD 180 (619)
Q Consensus 103 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 180 (619)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|..|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 999 6888 99999999999996 99998777899999999999999999998888899999999999999
Q ss_pred CCcccccCCc-ccc--ccCccccCCCCCCCCCC
Q 007073 181 SNNLSGQIPV-HLF--QIPKYNFTGNNLNCGKT 210 (619)
Q Consensus 181 ~N~l~~~~p~-~l~--~l~~l~~~~n~~~c~~~ 210 (619)
+|+|++ +|. .+. .|..|++.+|++.|+|.
T Consensus 89 ~N~l~~-~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALES-LSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSC-CCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCccce-eCHHHcccCCceEEEeeCCCccCCCc
Confidence 999995 554 333 37889999999999987
No 363
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.39 E-value=5.5e-13 Score=135.39 Aligned_cols=125 Identities=22% Similarity=0.401 Sum_probs=104.1
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|++++..+ +..+++|++|+|++|++++ +| .+..+++|++|+|++|++++ ++. +..+++|+.|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 4689999999999996554 8999999999999999984 55 58999999999999999995 443 89999999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCc--cccccCccccCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLNCG 208 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~l~~l~~l~~~~n~~~c~ 208 (619)
|++|++++..+ +..+++|+.|++++|++++ +|. .+.++..|++++|.....
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTPLANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCC-ChhhcCCCCCCEEECCCCccCcC
Confidence 99999995433 8899999999999999995 543 345667788888887543
No 364
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.38 E-value=9.7e-14 Score=128.71 Aligned_cols=106 Identities=23% Similarity=0.284 Sum_probs=95.8
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCC--cccccccchhh
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPP--SLGNLKKLQFL 153 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L 153 (619)
.+|+.|+|++|.|++. +.|..+++|++|+|++|+|++..|..+..+++|++|+|++|+|+ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999976 68999999999999999999555555699999999999999997 6776 89999999999
Q ss_pred hccCCcCCCCCCCc----cccccccccccCCCCccc
Q 007073 154 TLSQNNFSGTIPDS----LTTLSSLISIQLDSNNLS 185 (619)
Q Consensus 154 ~l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 185 (619)
++++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999998 77875 889999999999999886
No 365
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.38 E-value=3.4e-13 Score=139.30 Aligned_cols=125 Identities=25% Similarity=0.346 Sum_probs=70.2
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|+.|++++|.+.+..+ +..+++|++|+|++|++++ +|. +..+++|++|+|++|.+++ + +.+..+++|+.|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred CccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 456666666666664433 5566666666666666663 332 5566666666666666663 2 34556666666666
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCG 208 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~~~c~ 208 (619)
++|++++ + +.+..+++|+.|++++|++++..|..+ .++..|++++|++...
T Consensus 273 ~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 273 GSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp CSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred cCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 6666653 2 235556666666666666665444433 2344455666655433
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.36 E-value=7e-13 Score=146.63 Aligned_cols=122 Identities=26% Similarity=0.409 Sum_probs=66.3
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|+.|+|++|.|++..+ +..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++ + +.+..|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 456666666666664433 5566666666666666652 33 35556666666666666653 2 23555566666666
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCC-ccccccCccccCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNL 205 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~l~~~~n~~ 205 (619)
++|+|++. ..+..+++|+.|+|++|+|++..| ..+.+|..|++++|.+
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCC
Confidence 66665532 345555556666666665554333 1223344455555544
No 367
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.36 E-value=2.7e-15 Score=142.11 Aligned_cols=86 Identities=23% Similarity=0.332 Sum_probs=42.0
Q ss_pred cccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCcccccccc
Q 007073 95 RIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSL 174 (619)
Q Consensus 95 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 174 (619)
.+..+++|++|+|++|+|++ +| .+.++++|++|+|++|+|+ .+|..+..+++|+.|+|++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 44445555555555555542 34 4445555555555555554 344444444555555555555542 33 34444555
Q ss_pred ccccCCCCccc
Q 007073 175 ISIQLDSNNLS 185 (619)
Q Consensus 175 ~~L~l~~N~l~ 185 (619)
+.|++++|+++
T Consensus 118 ~~L~l~~N~i~ 128 (198)
T 1ds9_A 118 RVLYMSNNKIT 128 (198)
T ss_dssp SEEEESEEECC
T ss_pred CEEECCCCcCC
Confidence 55555555554
No 368
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.34 E-value=3.4e-13 Score=137.57 Aligned_cols=125 Identities=18% Similarity=0.218 Sum_probs=106.8
Q ss_pred CCCeEEEEeCCCCccccCCcccc-CCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIG-VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
..+|+.|+|++|.+++..+..+. .+++|++|+|++|+|++ +|. ...+++|++|+|++|+|+ .+|..+..+++|+.|
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L 219 (317)
T 3o53_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWI 219 (317)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEE
T ss_pred cCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCCEEECCCCcCC-cchhhhcccCcccEE
Confidence 35899999999999988887774 79999999999999994 454 446999999999999999 566679999999999
Q ss_pred hccCCcCCCCCCCccccccccccccCCCCccc-ccCCccccccCc---cccCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLS-GQIPVHLFQIPK---YNFTGN 203 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~l~~l~~---l~~~~n 203 (619)
+|++|+|+ .+|..+..+++|+.|++++|+++ +.+|..+..++. +++.+|
T Consensus 220 ~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 220 SLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp ECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 99999999 78999999999999999999999 777776665544 445533
No 369
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.33 E-value=1.3e-12 Score=144.59 Aligned_cols=125 Identities=29% Similarity=0.393 Sum_probs=107.6
Q ss_pred CCCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 74 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 74 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
...+|+.|+|++|.|++. | .+..+++|+.|+|++|+|++ +| .+..|++|+.|+|++|+|++. ..+..+++|+.|
T Consensus 85 ~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 158 (605)
T 1m9s_A 85 NLKNLGWLFLDENKIKDL-S-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 158 (605)
T ss_dssp GCTTCCEEECCSSCCCCC-T-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEE
T ss_pred cCCCCCEEECcCCCCCCC-h-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEE
Confidence 356899999999999863 3 78999999999999999995 44 499999999999999999954 689999999999
Q ss_pred hccCCcCCCCCCCccccccccccccCCCCcccccCCc--cccccCccccCCCCCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLNC 207 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~l~~l~~l~~~~n~~~c 207 (619)
+|++|+|++..| +..+++|+.|+|++|+|++ +|. .+.+|..|++++|++..
T Consensus 159 ~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 159 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEECCSEEEEC
T ss_pred ECcCCcCCCchh--hccCCCCCEEECcCCCCCC-ChHHccCCCCCEEEccCCcCcC
Confidence 999999997666 8999999999999999995 553 34567778899888754
No 370
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.33 E-value=1.5e-12 Score=134.71 Aligned_cols=141 Identities=16% Similarity=0.202 Sum_probs=111.2
Q ss_pred CCcceeEEcCC----------CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCc-ccccccccCcE-eeec
Q 007073 65 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIP-EELGNLSSLTS-LDLD 132 (619)
Q Consensus 65 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~ 132 (619)
|.|..|.|++. .+++.|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| ..|.++++|+. +.++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 67888999642 378999999999997767789999999999999999876666 46788988775 6777
Q ss_pred CCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCC-CcccccCCc-ccc----ccCccccCCCCCC
Q 007073 133 NNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDS-NNLSGQIPV-HLF----QIPKYNFTGNNLN 206 (619)
Q Consensus 133 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~-~l~----~l~~l~~~~n~~~ 206 (619)
+|+|++..|..|.++++|+.|++++|+|++..+..+....++..|++.+ |+++ .+|. .+. .+..|++++|.+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchhhcchhhhhhcccccccc
Confidence 8999977788999999999999999999966566666777788888855 5666 5553 333 3445778887764
No 371
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.32 E-value=3.8e-13 Score=149.00 Aligned_cols=137 Identities=20% Similarity=0.294 Sum_probs=90.9
Q ss_pred CCCCCCCCCCCCCCcceeEEc------C-CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCccccccccc
Q 007073 53 QLRDWNQNQVNPCTWSNVICD------N-SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSS 125 (619)
Q Consensus 53 ~l~~w~~~~~~~c~w~gv~c~------~-~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 125 (619)
..++|.. +.+||.|.|..|. . ..+++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|. .+++
T Consensus 11 ~w~~W~~-~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 11 VWSAWRR-AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp HHHHHHH-TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHHHh-cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 3445754 3467888654321 1 125778888888887 6666554 67888888888877 5665 4677
Q ss_pred CcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCCccccccCccccCCCCC
Q 007073 126 LTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNL 205 (619)
Q Consensus 126 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~~ 205 (619)
|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|. .+++|+.|++++|+++ .+|..+.++..|++++|.+
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~~N~l~-~lp~~l~~L~~L~Ls~N~l 153 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIFGNQLT-SLPVLPPGLQELSVSDNQL 153 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCC
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECCCCCCC-cCCCCCCCCCEEECcCCcC
Confidence 888888888877 4665 5677777777777777 4554 4456677777777776 4666666666666666655
Q ss_pred C
Q 007073 206 N 206 (619)
Q Consensus 206 ~ 206 (619)
.
T Consensus 154 ~ 154 (622)
T 3g06_A 154 A 154 (622)
T ss_dssp S
T ss_pred C
Confidence 4
No 372
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.31 E-value=1.7e-12 Score=139.70 Aligned_cols=122 Identities=30% Similarity=0.442 Sum_probs=72.4
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|+.|+|++|.+++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..| +..+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 467777777777765443 6666677777777776664333 6666666666666666664332 566666666666
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCC--ccccccCccccCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP--VHLFQIPKYNFTGNNLN 206 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~l~~l~~l~~~~n~~~ 206 (619)
++|++++..| +..+++|+.|++++|++++. + ..+.++..|++++|+..
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQIS 366 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccC
Confidence 6666665444 55566666666666666632 2 12234444555555543
No 373
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.31 E-value=2.9e-12 Score=140.29 Aligned_cols=115 Identities=22% Similarity=0.346 Sum_probs=76.6
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|+|++ +|. +.. +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+
T Consensus 99 l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 166 (571)
T 3cvr_A 99 PASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLS 166 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred cCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEE
Confidence 4577888888888876 555 544 77777777777774 555 56777777777777774 555 456777777
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCcccccc-------CccccCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQI-------PKYNFTGNNLN 206 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l-------~~l~~~~n~~~ 206 (619)
|++|+|++ +|. |. ++|+.|+|++|+|+ .+|....++ ..|++++|.+.
T Consensus 167 Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~~~~~L~~~~~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 167 VRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT 220 (571)
T ss_dssp CCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCCCC--------CCEEEECCSSCCC
T ss_pred CCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhhHHHhhhcccccceEEecCCCcce
Confidence 77777774 665 44 67777777777777 566522245 55666766665
No 374
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.29 E-value=1.7e-14 Score=136.54 Aligned_cols=125 Identities=22% Similarity=0.296 Sum_probs=106.5
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|++++ +| .+..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++ +| .+.++++|+.|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 4689999999999997 66 8999999999999999999 788888889999999999999995 56 699999999999
Q ss_pred ccCCcCCCCCC--CccccccccccccCCCCcccccCCcc----------ccccCcccc-CCCCC
Q 007073 155 LSQNNFSGTIP--DSLTTLSSLISIQLDSNNLSGQIPVH----------LFQIPKYNF-TGNNL 205 (619)
Q Consensus 155 l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~p~~----------l~~l~~l~~-~~n~~ 205 (619)
|++|+++ .+| ..+..+++|+.|++++|++++.+|.. +..++.|.. .+|+.
T Consensus 122 l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld~~~i 184 (198)
T 1ds9_A 122 MSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLDGMPV 184 (198)
T ss_dssp ESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEECCGGG
T ss_pred CCCCcCC-chhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEECCccc
Confidence 9999999 444 47889999999999999999776653 556666543 34443
No 375
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.26 E-value=7.1e-12 Score=134.34 Aligned_cols=124 Identities=23% Similarity=0.245 Sum_probs=102.3
Q ss_pred CCCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhh
Q 007073 74 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 74 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
...+|+.|+|++|++++ +| +..+++|+.|++++|++++. + ++.+++|++|+|++|+|++ +| ++.+++|+.|
T Consensus 168 ~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L 238 (457)
T 3bz5_A 168 PQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYF 238 (457)
T ss_dssp TCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEE
T ss_pred cCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c--cccCCCCCEEECcCCcccc-cC--ccccCCCCEE
Confidence 34689999999999997 44 88899999999999999964 3 8899999999999999996 66 8899999999
Q ss_pred hccCCcCCCCCCCcccccc-------ccccccCCCCcccccCCc-cccccCccccCCCCCC
Q 007073 154 TLSQNNFSGTIPDSLTTLS-------SLISIQLDSNNLSGQIPV-HLFQIPKYNFTGNNLN 206 (619)
Q Consensus 154 ~l~~N~l~~~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~-~l~~l~~l~~~~n~~~ 206 (619)
++++|++++..+..+..++ +|+.|++++|++.|.+|. .+.++..|++++|+..
T Consensus 239 ~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l 299 (457)
T 3bz5_A 239 DCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQL 299 (457)
T ss_dssp ECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTC
T ss_pred EeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCccc
Confidence 9999999977666666655 567888888888878873 4567888888888743
No 376
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.25 E-value=7.3e-12 Score=134.81 Aligned_cols=126 Identities=27% Similarity=0.403 Sum_probs=102.2
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|+|++|.+++. +.+..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..+ +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 45899999999998864 468889999999999999986554 8889999999999999985443 88899999999
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCC-ccccccCccccCCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNLNCG 208 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~l~~~~n~~~c~ 208 (619)
|++|++++..| +..+++|+.|++++|++++..| ..+.++..|++++|+....
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 99999986544 7888999999999999987665 3455677788888877654
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.25 E-value=1.3e-11 Score=132.41 Aligned_cols=123 Identities=19% Similarity=0.211 Sum_probs=91.7
Q ss_pred cCCCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchh
Q 007073 73 DNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQF 152 (619)
Q Consensus 73 ~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 152 (619)
....+|+.|+|++|++++. .++.+++|++|++++|+..+.+ .+..+++|++|+|++|+|++ +| ++.+++|+.
T Consensus 124 ~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~ 195 (457)
T 3bz5_A 124 SQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNR 195 (457)
T ss_dssp TTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCE
T ss_pred CCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCE
Confidence 3456889999999998874 2778888888888888655566 37788888888888888885 55 777888888
Q ss_pred hhccCCcCCCCCCCccccccccccccCCCCcccccCC-ccccccCccccCCCCCCC
Q 007073 153 LTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNLNC 207 (619)
Q Consensus 153 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~l~~~~n~~~c 207 (619)
|++++|++++. .+..+++|+.|++++|++++ +| ..+.++..|++++|.+..
T Consensus 196 L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 196 LNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-IDVTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp EECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CCCTTCTTCSEEECCSSCCSC
T ss_pred EECcCCcCCee---ccccCCCCCEEECcCCcccc-cCccccCCCCEEEeeCCcCCC
Confidence 88888888753 37777888888888888885 56 234456667777777654
No 378
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.25 E-value=6.5e-12 Score=137.99 Aligned_cols=104 Identities=29% Similarity=0.406 Sum_probs=92.6
Q ss_pred CCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccccccCC
Q 007073 101 TLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLD 180 (619)
Q Consensus 101 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 180 (619)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58899999999994 787 999999999999999999 899999999999999999999995 77 89999999999999
Q ss_pred CCcccccC-Ccccc---ccCccccCCCCCCCCC
Q 007073 181 SNNLSGQI-PVHLF---QIPKYNFTGNNLNCGK 209 (619)
Q Consensus 181 ~N~l~~~~-p~~l~---~l~~l~~~~n~~~c~~ 209 (619)
+|+|++.+ |..+. +|..|++++|++....
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 99999766 87665 4556789999875443
No 379
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.24 E-value=9e-12 Score=128.51 Aligned_cols=122 Identities=28% Similarity=0.451 Sum_probs=78.3
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++ ++. +..+++|+.|++
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEEC
Confidence 467777777777764433 6667777777777777764333 6667777777777777773 333 667777777777
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCC--ccccccCccccCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP--VHLFQIPKYNFTGNNLN 206 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~l~~l~~l~~~~n~~~ 206 (619)
++|++++ + +.+..+++|+.|++++|++++ +| ..+.++..|++++|+..
T Consensus 251 ~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 251 GTNQISD-I-NAVKDLTKLKMLNVGSNQISD-ISVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp CSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCC
T ss_pred CCCccCC-C-hhHhcCCCcCEEEccCCccCC-ChhhcCCCCCCEEECcCCcCC
Confidence 7777763 3 346667777777777777763 34 23345556666666653
No 380
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=3.7e-11 Score=118.75 Aligned_cols=145 Identities=12% Similarity=0.073 Sum_probs=112.6
Q ss_pred HHhcCCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeE
Q 007073 291 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLV 369 (619)
Q Consensus 291 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 369 (619)
...+.|.....++.|+.+.||++... |..+++|+...... .....+.+|+++++.+. +..+.++++++...+..++|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 34456887888898999999999864 78999999864211 12345889999999885 66778899998888889999
Q ss_pred ecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 007073 370 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC---------------------------------- 415 (619)
Q Consensus 370 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------- 415 (619)
|||++|.++...+.. ......++.+++++++.||+..
T Consensus 89 ~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 89 MSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 999999998765321 1123467889999999999810
Q ss_pred ----------------------CCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 416 ----------------------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 416 ----------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876667799999875
No 381
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.24 E-value=1.6e-11 Score=131.54 Aligned_cols=118 Identities=24% Similarity=0.286 Sum_probs=79.0
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
.+|++|+|++|++++ +| .|+.+++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .++++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 467777777777775 55 47777888888888887774 55433 477777777777774 55 5777777777777
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCCc--cccccCccccCCCCCC
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLN 206 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~l~~l~~l~~~~n~~~ 206 (619)
++|++++ +|... ++|+.|++++|+++ .+|. .+.++..|++++|...
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~ 250 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLK 250 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCS
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCC
Confidence 7777773 44432 36666777777766 5663 2234555667777654
No 382
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.21 E-value=4.8e-13 Score=140.38 Aligned_cols=129 Identities=21% Similarity=0.310 Sum_probs=65.0
Q ss_pred CeEEEEeCCCCcc-ccCC---ccccCCCCCCEEEccCCCCC--C---CCcccccccccCcEeeecCCCcc----ccCCCc
Q 007073 77 NVASVTLSSMNFS-GTLS---PRIGVLRTLSTLTLKGNGIT--G---EIPEELGNLSSLTSLDLDNNRLV----GKIPPS 143 (619)
Q Consensus 77 ~l~~L~L~~n~l~-~~~~---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~ 143 (619)
+|++|+|++|+++ +.++ ..+..+++|++|+|++|+|+ | ..|..+..+++|+.|+|++|.|+ +.+|..
T Consensus 160 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 160 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 4555555555554 2222 23444555555555555554 1 22334555555555555555553 345555
Q ss_pred ccccccchhhhccCCcCCCC----CCCccc--cccccccccCCCCcccc----cCCccc----cccCccccCCCCC
Q 007073 144 LGNLKKLQFLTLSQNNFSGT----IPDSLT--TLSSLISIQLDSNNLSG----QIPVHL----FQIPKYNFTGNNL 205 (619)
Q Consensus 144 ~~~l~~L~~L~l~~N~l~~~----~p~~~~--~l~~L~~L~l~~N~l~~----~~p~~l----~~l~~l~~~~n~~ 205 (619)
+..+++|+.|+|++|+|++. +|..+. .+++|+.|+|++|++++ .+|..+ .++..|++.+|++
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred HccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 55555555555555555533 333332 25555556666665554 244332 3444555555554
No 383
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.19 E-value=5.7e-11 Score=117.03 Aligned_cols=137 Identities=13% Similarity=0.040 Sum_probs=101.1
Q ss_pred CCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCc--cceeeeeeCCCcceeEecc
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL--LRLIGFCTTPTERLLVYPF 372 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~~~~~lv~e~ 372 (619)
.+....+.+.|..+.||++...+|+.+++|..... ....+.+|+++++.+.+.++ .+++++...++..++||||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 34433333456679999998877889999987542 22457789999998876554 4588888877788999999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC------------------------------------- 415 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------- 415 (619)
++|.++. ... .+ ...++.++++.|+.||+..
T Consensus 97 i~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 97 VPGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp CSSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred cCCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 9998884 211 11 2356778888888888742
Q ss_pred ------------------CCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 416 ------------------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 416 ------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
.+.++|+|++|.||+++++..+.|+|||.+..
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998876678999998763
No 384
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.19 E-value=4.2e-13 Score=137.87 Aligned_cols=128 Identities=21% Similarity=0.218 Sum_probs=91.6
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCC-CcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGE-IPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|++++..|..++++++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4677788888877766554 55678888888888887754 677777788888888888887777777777788888888
Q ss_pred ccCC-cCCCC-CCCccccccccccccCCCC-ccccc-CCcc---cc-ccCccccCCCC
Q 007073 155 LSQN-NFSGT-IPDSLTTLSSLISIQLDSN-NLSGQ-IPVH---LF-QIPKYNFTGNN 204 (619)
Q Consensus 155 l~~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~---l~-~l~~l~~~~n~ 204 (619)
|++| .+++. +|..+..+++|+.|++++| .+++. +|.. +. ++..|++++|.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 8887 56642 5556677778888888888 77743 3433 33 55666777764
No 385
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.19 E-value=1.4e-12 Score=135.51 Aligned_cols=129 Identities=27% Similarity=0.337 Sum_probs=72.4
Q ss_pred CeEEEEeCCCCccccCC----ccccCCC-CCCEEEccCCCCCCCCccccccc-----ccCcEeeecCCCccccCCCcccc
Q 007073 77 NVASVTLSSMNFSGTLS----PRIGVLR-TLSTLTLKGNGITGEIPEELGNL-----SSLTSLDLDNNRLVGKIPPSLGN 146 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~ 146 (619)
+|+.|+|++|.+++..+ ..+..++ +|++|+|++|+|++..+..+..+ ++|++|+|++|+|++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 46666666666665544 4555566 66666666666665555555554 66666666666666544443333
Q ss_pred c-----ccchhhhccCCcCCCCCCCccc----c-ccccccccCCCCcccccCCccc--------cccCccccCCCCC
Q 007073 147 L-----KKLQFLTLSQNNFSGTIPDSLT----T-LSSLISIQLDSNNLSGQIPVHL--------FQIPKYNFTGNNL 205 (619)
Q Consensus 147 l-----~~L~~L~l~~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~~~~p~~l--------~~l~~l~~~~n~~ 205 (619)
. ++|+.|+|++|+|++..+..+. . .++|+.|+|++|++++..+..+ .++..|++++|..
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l 179 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNL 179 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCC
Confidence 2 5666666666666643333322 2 2466666666666663322211 2455566666654
No 386
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.17 E-value=5.5e-11 Score=127.28 Aligned_cols=120 Identities=25% Similarity=0.314 Sum_probs=94.5
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhh
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 154 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 154 (619)
..+|+.|++++|++++ +|.. .++|++|+|++|++++ +| .++++++|++|++++|++++ +|... ++|+.|+
T Consensus 152 l~~L~~L~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~ 221 (454)
T 1jl5_A 152 SSFLKIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIV 221 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEE
T ss_pred CCCCCEEECCCCcCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEE
Confidence 4578999999999885 5543 3588899999999885 66 58888999999999998884 56543 5788888
Q ss_pred ccCCcCCCCCCCccccccccccccCCCCcccccCCccccccCccccCCCCCCC
Q 007073 155 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLNC 207 (619)
Q Consensus 155 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~~~c 207 (619)
+++|+++ .+|. +..+++|+.|++++|+++ .+|..+.++..|++++|....
T Consensus 222 l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~-~l~~~~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 222 AGNNILE-ELPE-LQNLPFLTTIYADNNLLK-TLPDLPPSLEALNVRDNYLTD 271 (454)
T ss_dssp CCSSCCS-SCCC-CTTCTTCCEEECCSSCCS-SCCSCCTTCCEEECCSSCCSC
T ss_pred CcCCcCC-cccc-cCCCCCCCEEECCCCcCC-cccccccccCEEECCCCcccc
Confidence 8888888 6774 788888888888888888 477777788888888887653
No 387
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.15 E-value=6.1e-11 Score=131.33 Aligned_cols=111 Identities=22% Similarity=0.318 Sum_probs=55.6
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|+.|+|+
T Consensus 62 ~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~ 129 (622)
T 3g06_A 62 HITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIF 129 (622)
T ss_dssp TCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECC
T ss_pred CCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECC
Confidence 5666666666665 3333 3556666666666665 3443 4455666666666555 2343 33445555555
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccccCCccccccCccccCCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNN 204 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l~~~~n~ 204 (619)
+|+|+ .+|.. +++|+.|++++|+++ .+|..+.++..|++++|.
T Consensus 130 ~N~l~-~lp~~---l~~L~~L~Ls~N~l~-~l~~~~~~L~~L~L~~N~ 172 (622)
T 3g06_A 130 GNQLT-SLPVL---PPGLQELSVSDNQLA-SLPALPSELCKLWAYNNQ 172 (622)
T ss_dssp SSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSC
T ss_pred CCCCC-cCCCC---CCCCCEEECcCCcCC-CcCCccCCCCEEECCCCC
Confidence 55555 34432 244455555555554 234333444444444433
No 388
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.15 E-value=1.4e-12 Score=133.83 Aligned_cols=131 Identities=18% Similarity=0.260 Sum_probs=100.9
Q ss_pred CCCeEEEEeCCCCcccc-CCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCC-Ccccc-CCCcccccccch
Q 007073 75 SNNVASVTLSSMNFSGT-LSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN-RLVGK-IPPSLGNLKKLQ 151 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~ 151 (619)
..+|++|+|++|.+++. ++..+..+++|++|+|++|++++..|..++++++|++|+|++| .+++. ++..+.++++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 35788889998888765 7777888888889999888888778888888888888888888 67752 666678888888
Q ss_pred hhhccCC-cCCCC-CCCcccccc-ccccccCCCC--ccc-ccCCcc---ccccCccccCCCCC
Q 007073 152 FLTLSQN-NFSGT-IPDSLTTLS-SLISIQLDSN--NLS-GQIPVH---LFQIPKYNFTGNNL 205 (619)
Q Consensus 152 ~L~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~p~~---l~~l~~l~~~~n~~ 205 (619)
.|+|++| .+++. ++..+..++ +|+.|++++| .++ +.+|.. +.++..|++++|..
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 8888888 88743 566677788 8888888888 454 345543 34666777887773
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.15 E-value=1.3e-12 Score=137.03 Aligned_cols=130 Identities=21% Similarity=0.318 Sum_probs=75.6
Q ss_pred CCeEEEEeCCCCccc----cCCccccCCCCCCEEEccCCCCCCCCccccc----cc---------ccCcEeeecCCCcc-
Q 007073 76 NNVASVTLSSMNFSG----TLSPRIGVLRTLSTLTLKGNGITGEIPEELG----NL---------SSLTSLDLDNNRLV- 137 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~- 137 (619)
.+|++|+|++|.+++ .+|..+..+++|++|+|++|.|++..+..+. .+ ++|++|+|++|+|+
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 466777777777665 3555666667777777777766533332222 23 66666666666665
Q ss_pred ccCC---CcccccccchhhhccCCcCC--C---CCCCccccccccccccCCCCccc----ccCCccc---cccCccccCC
Q 007073 138 GKIP---PSLGNLKKLQFLTLSQNNFS--G---TIPDSLTTLSSLISIQLDSNNLS----GQIPVHL---FQIPKYNFTG 202 (619)
Q Consensus 138 ~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~l---~~l~~l~~~~ 202 (619)
+.+| ..+..+++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|+++ +.+|..+ .++..|++++
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~ 253 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 253 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCC
Confidence 3333 34556666666666666665 2 23445566666666666666664 3455433 2444555666
Q ss_pred CCC
Q 007073 203 NNL 205 (619)
Q Consensus 203 n~~ 205 (619)
|.+
T Consensus 254 n~i 256 (386)
T 2ca6_A 254 CLL 256 (386)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.13 E-value=4.5e-12 Score=131.76 Aligned_cols=127 Identities=24% Similarity=0.261 Sum_probs=107.3
Q ss_pred EEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCc----ccccccc-cCcEeeecCCCccccCCCccccc-----cc
Q 007073 80 SVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIP----EELGNLS-SLTSLDLDNNRLVGKIPPSLGNL-----KK 149 (619)
Q Consensus 80 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 149 (619)
.++|+.|+++|.+|..+...++|++|+|++|+|++..+ ..+.+++ +|++|+|++|+|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999888878889999999999997766 7788898 99999999999998778788776 99
Q ss_pred chhhhccCCcCCCCCCCcccc----c-cccccccCCCCcccccCCccc--------cccCccccCCCCCC
Q 007073 150 LQFLTLSQNNFSGTIPDSLTT----L-SSLISIQLDSNNLSGQIPVHL--------FQIPKYNFTGNNLN 206 (619)
Q Consensus 150 L~~L~l~~N~l~~~~p~~~~~----l-~~L~~L~l~~N~l~~~~p~~l--------~~l~~l~~~~n~~~ 206 (619)
|++|+|++|++++..+..+.. + ++|+.|+|++|++++..+..+ .++..|++++|.+.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 999999999999766665444 3 899999999999986554332 37888999999764
No 391
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.07 E-value=6.7e-10 Score=115.11 Aligned_cols=143 Identities=14% Similarity=0.193 Sum_probs=105.8
Q ss_pred ccCccccCCCceEEEEEeCCCcEEEEEEec--cCCCcchHHHHHHHHHHHHHcc--CCCccceeeeeeCC---CcceeEe
Q 007073 298 EKNVLGQGGFGKVYRGVLADGTKVAVKRLT--DFESPGGDAAFQREVEMISVAV--HRNLLRLIGFCTTP---TERLLVY 370 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~--~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~ 370 (619)
..+.|+.|.++.||+.... +..+++|+.. ..........+.+|+++++.+. +..+.++++++... +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 3567899999999999875 4678888765 3221223456788999999987 45577888888766 3478999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC----------------------------------- 415 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------- 415 (619)
||++|..+.+... ..++...+..++.+++++|+.||+..
T Consensus 121 e~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 9999977754211 12567788889999999999999731
Q ss_pred --------------------CCCeEecCCCCCcEEeCCCCc--EEEccccccee
Q 007073 416 --------------------NPKIIHRDVKAANVLLDEDFE--AVVGDFGLAKL 447 (619)
Q Consensus 416 --------------------~~~ivH~Dlkp~NIll~~~~~--~kl~DfGla~~ 447 (619)
.+.++|||+++.||+++.++. +.|+||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997653 68999999875
No 392
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.00 E-value=3.7e-10 Score=116.60 Aligned_cols=170 Identities=17% Similarity=0.120 Sum_probs=89.0
Q ss_pred CccccccchhcccchhHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCcceeEEcCCCC-eEEEEeCCCCccccCCccccCC
Q 007073 21 DPDLHNGWLTFLCSLSGDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSNN-VASVTLSSMNFSGTLSPRIGVL 99 (619)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~al~~~k~~l~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~-l~~L~L~~n~l~~~~~~~~~~l 99 (619)
..++++|.++.+....+..|-.++. |+..+|.+...-+ +-.+. +..+ ++.+.++.|+|+.+.|..|..+
T Consensus 34 ~L~Ls~N~i~~i~~~~f~~l~~L~~-L~Ls~N~i~~~i~----~~~f~-----~L~~l~~~l~~~~N~l~~l~~~~f~~l 103 (350)
T 4ay9_X 34 ELRFVLTKLRVIQKGAFSGFGDLEK-IEISQNDVLEVIE----ADVFS-----NLPKLHEIRIEKANNLLYINPEAFQNL 103 (350)
T ss_dssp EEEEESCCCSEECTTSSTTCTTCCE-EEEECCTTCCEEC----TTSBC-----SCTTCCEEEEEEETTCCEECTTSBCCC
T ss_pred EEEccCCcCCCcCHHHHcCCCCCCE-EECcCCCCCCccC----hhHhh-----cchhhhhhhcccCCcccccCchhhhhc
Confidence 3456677777776655554444443 3334443322110 01111 1122 3345556667776666666777
Q ss_pred CCCCEEEccCCCCCCCCcccccccc--------------------------cCcEeeecCCCccccCCCcccccccchhh
Q 007073 100 RTLSTLTLKGNGITGEIPEELGNLS--------------------------SLTSLDLDNNRLVGKIPPSLGNLKKLQFL 153 (619)
Q Consensus 100 ~~L~~L~L~~N~l~~~~p~~~~~l~--------------------------~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (619)
++|++|++++|+|++..+..+.... .|+.|+|++|+|+ .+|.......+|+.|
T Consensus 104 ~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l 182 (350)
T 4ay9_X 104 PNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDEL 182 (350)
T ss_dssp TTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEE
T ss_pred cccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHH
Confidence 7777777777776644333333333 3555666666666 344444445556666
Q ss_pred hccC-CcCCCCCC-CccccccccccccCCCCcccccCC-ccccccCccccCCC
Q 007073 154 TLSQ-NNFSGTIP-DSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGN 203 (619)
Q Consensus 154 ~l~~-N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~l~~~~n 203 (619)
++++ |.++ .+| +.|..+++|+.|+|++|+|+ .+| ..+.++++|...++
T Consensus 183 ~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 183 NLSDNNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARST 233 (350)
T ss_dssp ECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTC
T ss_pred hhccCCccc-CCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccC
Confidence 6653 4444 443 34566666666666666666 444 33555555555444
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.96 E-value=1.5e-11 Score=132.04 Aligned_cols=132 Identities=19% Similarity=0.216 Sum_probs=98.7
Q ss_pred CCCeEEEEeCCCCcccc----CCccccCCCCCCEEEccCCCCCCCCccccccc-----ccCcEeeecCCCcccc----CC
Q 007073 75 SNNVASVTLSSMNFSGT----LSPRIGVLRTLSTLTLKGNGITGEIPEELGNL-----SSLTSLDLDNNRLVGK----IP 141 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~p 141 (619)
..+|+.|+|++|+++.. ++..+..+++|++|+|++|.+++..+..+... ++|++|+|++|.+++. ++
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 45899999999998864 56777788999999999998875544444432 6889999999988854 45
Q ss_pred CcccccccchhhhccCCcCCCCCCCcccc-----ccccccccCCCCcccc----cCCccc---cccCccccCCCCCC
Q 007073 142 PSLGNLKKLQFLTLSQNNFSGTIPDSLTT-----LSSLISIQLDSNNLSG----QIPVHL---FQIPKYNFTGNNLN 206 (619)
Q Consensus 142 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~----~~p~~l---~~l~~l~~~~n~~~ 206 (619)
..+..+++|+.|+|++|++++..+..+.. .++|+.|++++|++++ .+|..+ .++..|++++|++.
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 66777788999999998887544443332 5688888999988885 667554 46667788888764
No 394
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.93 E-value=1.2e-09 Score=110.43 Aligned_cols=186 Identities=16% Similarity=0.183 Sum_probs=120.2
Q ss_pred cCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCC--ccceeeeeeCCC---cceeEecc
Q 007073 299 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRN--LLRLIGFCTTPT---ERLLVYPF 372 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~e~ 372 (619)
.+.++.|.+..||+.. ..+++|+-.. ......+.+|.++++.+. +.. +.+++....... ..++||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~---~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH---SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS---HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC---cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4568999999999864 5688897642 234567889999998884 333 334444443332 34788999
Q ss_pred cccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 007073 373 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH-------------------------------------- 414 (619)
Q Consensus 373 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------------------------------------- 414 (619)
++|.++...... .++..++..++.++++.++.||+.
T Consensus 98 i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 98 IKGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 999888653321 155666777888888888888861
Q ss_pred -----------------CCCCeEecCCCCCcEEeCC--CCcEEEcccccceeeccCCcceee-e------------cccc
Q 007073 415 -----------------CNPKIIHRDVKAANVLLDE--DFEAVVGDFGLAKLVDVRKTNVTT-Q------------VRGT 462 (619)
Q Consensus 415 -----------------~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~-~------------~~gt 462 (619)
..+.++|+|++|.||++++ +..+.|+||+.+..-.....-... . ....
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 1245899999999999998 566889999998754321000000 0 0000
Q ss_pred ccccc-cccccCCCCCcchhhHHHHHHHHHHHhCCCCC
Q 007073 463 MGHIA-PEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 499 (619)
Q Consensus 463 ~~y~a-PE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~ 499 (619)
.++.. |+.... .....+.|++|.++|++.+|..+|
T Consensus 252 Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11111 222111 122368999999999999998764
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.93 E-value=1.6e-11 Score=131.86 Aligned_cols=132 Identities=19% Similarity=0.169 Sum_probs=105.5
Q ss_pred CCCeEEEEeCCCCccccC-----CccccCCCCCCEEEccCCCCCCC----CcccccccccCcEeeecCCCccccCCCccc
Q 007073 75 SNNVASVTLSSMNFSGTL-----SPRIGVLRTLSTLTLKGNGITGE----IPEELGNLSSLTSLDLDNNRLVGKIPPSLG 145 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 145 (619)
..+|+.|+|++|.+++.. +..+..+++|++|+|++|++++. ++..+.++++|++|+|++|.+++..+..+.
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHH
Confidence 468999999999988642 22334689999999999999953 677888899999999999999865444444
Q ss_pred cc-----ccchhhhccCCcCCCC----CCCccccccccccccCCCCcccccCCccc--------cccCccccCCCCCC
Q 007073 146 NL-----KKLQFLTLSQNNFSGT----IPDSLTTLSSLISIQLDSNNLSGQIPVHL--------FQIPKYNFTGNNLN 206 (619)
Q Consensus 146 ~l-----~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~l--------~~l~~l~~~~n~~~ 206 (619)
.. ++|+.|+|++|.+++. +|..+..+++|+.|++++|++++..+..+ .++..|++++|...
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 33 6999999999999865 46667788999999999999986545433 37888999999764
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.78 E-value=1.2e-10 Score=121.06 Aligned_cols=130 Identities=18% Similarity=0.206 Sum_probs=94.2
Q ss_pred CCeEEEEeCCCCccccCCccc-cCCCCCCEEEccCCCCCCCCcccc-----cccccCcEeeecCCCccc----cCCCccc
Q 007073 76 NNVASVTLSSMNFSGTLSPRI-GVLRTLSTLTLKGNGITGEIPEEL-----GNLSSLTSLDLDNNRLVG----KIPPSLG 145 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~ 145 (619)
.+|+.|+|++|.++......+ ..+++|+.|+|++|+|+......+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 479999999998875433333 346788999999999875443444 246789999999999873 2445557
Q ss_pred ccccchhhhccCCcCCCC----CCCccccccccccccCCCCccccc----CCccc---cccCccccCCCCC
Q 007073 146 NLKKLQFLTLSQNNFSGT----IPDSLTTLSSLISIQLDSNNLSGQ----IPVHL---FQIPKYNFTGNNL 205 (619)
Q Consensus 146 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~l---~~l~~l~~~~n~~ 205 (619)
.+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|+.. ++..+ .++..|++++|++
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCC
Confidence 788999999999998732 345566778899999999999743 22222 4677888888875
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.75 E-value=2.1e-10 Score=112.52 Aligned_cols=99 Identities=24% Similarity=0.265 Sum_probs=72.6
Q ss_pred CCCCCE--EEccCCCCCCCCcc----cccccccCcEeeecCCCccc--cCCCcccccccchhhhccCCcCCCCCCCcccc
Q 007073 99 LRTLST--LTLKGNGITGEIPE----ELGNLSSLTSLDLDNNRLVG--KIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTT 170 (619)
Q Consensus 99 l~~L~~--L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 170 (619)
.+.|.. ++++.|+.. .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..
T Consensus 140 dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~ 216 (267)
T 3rw6_A 140 DPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDK 216 (267)
T ss_dssp CHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGG
T ss_pred CcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhh
Confidence 344444 666777544 3332 22568899999999999997 5567788999999999999999954 34555
Q ss_pred cc--ccccccCCCCcccccCCc-------cccccCcccc
Q 007073 171 LS--SLISIQLDSNNLSGQIPV-------HLFQIPKYNF 200 (619)
Q Consensus 171 l~--~L~~L~l~~N~l~~~~p~-------~l~~l~~l~~ 200 (619)
+. +|+.|+|++|.+++.+|. .+..+++|..
T Consensus 217 l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~ 255 (267)
T 3rw6_A 217 IKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLR 255 (267)
T ss_dssp GTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCE
T ss_pred cccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCe
Confidence 55 899999999999988873 2456666653
No 398
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.64 E-value=2.8e-09 Score=104.48 Aligned_cols=80 Identities=24% Similarity=0.344 Sum_probs=66.5
Q ss_pred cCCCCCCEEEccCCCCCC--CCcccccccccCcEeeecCCCccccCCCcccccc--cchhhhccCCcCCCCCCC------
Q 007073 97 GVLRTLSTLTLKGNGITG--EIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLK--KLQFLTLSQNNFSGTIPD------ 166 (619)
Q Consensus 97 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~------ 166 (619)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|++|+|++|.+++.+|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 468999999999999997 4557778999999999999999954 4456666 999999999999987774
Q ss_pred -cccccccccccc
Q 007073 167 -SLTTLSSLISIQ 178 (619)
Q Consensus 167 -~~~~l~~L~~L~ 178 (619)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 366788888776
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.63 E-value=1.4e-09 Score=112.94 Aligned_cols=117 Identities=22% Similarity=0.197 Sum_probs=91.3
Q ss_pred CCeEEEEeCCCCccccCCccc-----cCCCCCCEEEccCCCCCC----CCcccccccccCcEeeecCCCcccc----CCC
Q 007073 76 NNVASVTLSSMNFSGTLSPRI-----GVLRTLSTLTLKGNGITG----EIPEELGNLSSLTSLDLDNNRLVGK----IPP 142 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~ 142 (619)
.+++.|+|++|+|+......+ ...++|++|+|++|.|+. .++..+..+++|++|+|++|.|+.. ++.
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 479999999999986544444 246889999999999974 2455567899999999999999842 356
Q ss_pred cccccccchhhhccCCcCCCC----CCCccccccccccccCCCCcccccCCccc
Q 007073 143 SLGNLKKLQFLTLSQNNFSGT----IPDSLTTLSSLISIQLDSNNLSGQIPVHL 192 (619)
Q Consensus 143 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~l 192 (619)
.+...++|+.|+|++|.|+.. ++..+...++|+.|+|++|+|+..-...+
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 677888999999999999842 33445567899999999999985433334
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=4.2e-08 Score=100.15 Aligned_cols=81 Identities=16% Similarity=0.220 Sum_probs=58.1
Q ss_pred cccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCccccccccc-cccCCCCcccccCC-ccccc---cCc
Q 007073 123 LSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLI-SIQLDSNNLSGQIP-VHLFQ---IPK 197 (619)
Q Consensus 123 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p-~~l~~---l~~ 197 (619)
+++|+.|+|++|+++...+..|.+|++|+.|+|.+| ++..-+.+|.+|++|+ .+++.+ +++ .|+ ..|.+ |..
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCE
Confidence 678888888888888555567888888888888887 6644456788888888 888887 676 454 45544 444
Q ss_pred cccCCCCCC
Q 007073 198 YNFTGNNLN 206 (619)
Q Consensus 198 l~~~~n~~~ 206 (619)
+++.+|...
T Consensus 302 l~l~~n~i~ 310 (329)
T 3sb4_A 302 VLATGDKIT 310 (329)
T ss_dssp EEECSSCCC
T ss_pred EEeCCCccC
Confidence 566666554
No 401
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.62 E-value=3.1e-07 Score=93.32 Aligned_cols=137 Identities=18% Similarity=0.227 Sum_probs=99.6
Q ss_pred CCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccC---C-CccceeeeeeCCCcceeEe
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVH---R-NLLRLIGFCTTPTERLLVY 370 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H---~-niv~l~~~~~~~~~~~lv~ 370 (619)
.+...+.++.|..+.||+. |..+++|+... ......+.+|.++++.+.+ + .+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~---~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR---DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc---HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 4555678999999999998 67788997632 2234568899999998876 1 23344444 5678999
Q ss_pred cccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 007073 371 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC----------------------------------- 415 (619)
Q Consensus 371 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------- 415 (619)
||++|.++...... .++...+..++.++++.++.||+..
T Consensus 107 e~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 107 KYIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp ECCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred eecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 99999888643211 1455566677777777777777532
Q ss_pred -------------------------CCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 416 -------------------------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 416 -------------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
.+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998766799999998754
No 402
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.58 E-value=4.1e-08 Score=100.25 Aligned_cols=85 Identities=14% Similarity=0.125 Sum_probs=44.9
Q ss_pred CCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccch-hhhccCCcCCCCCCCccccccccccc
Q 007073 99 LRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQ-FLTLSQNNFSGTIPDSLTTLSSLISI 177 (619)
Q Consensus 99 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~L 177 (619)
+++|+.|+|++|+++...+..|.++++|+.|+|++| ++..-+..|.++++|+ .|++.+ +++..-+.+|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 455555555555555333344555555555555555 4433444555555555 555555 4442334455555555555
Q ss_pred cCCCCccc
Q 007073 178 QLDSNNLS 185 (619)
Q Consensus 178 ~l~~N~l~ 185 (619)
++++|+++
T Consensus 303 ~l~~n~i~ 310 (329)
T 3sb4_A 303 LATGDKIT 310 (329)
T ss_dssp EECSSCCC
T ss_pred EeCCCccC
Confidence 55555555
No 403
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.46 E-value=9.9e-07 Score=87.97 Aligned_cols=143 Identities=26% Similarity=0.270 Sum_probs=93.6
Q ss_pred cccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCC---CccceeeeeeCCCcceeEeccc
Q 007073 297 SEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR---NLLRLIGFCTTPTERLLVYPFM 373 (619)
Q Consensus 297 ~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~~ 373 (619)
...+.|+.|.++.||++...+|+.++||+.... .......|..|++.++.+.+. .+.+++++. ..++||||+
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~-~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDD-APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTT-CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCC-CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 345679999999999999888999999986432 233346789999999999875 466777763 478999999
Q ss_pred ccchhhh-----------hhcccCCCC-----------------CCcCHHHHH---H-----------------HHHHHH
Q 007073 374 QNLSVAY-----------RLREIKPGE-----------------PVLDWVTRK---R-----------------VALGAA 405 (619)
Q Consensus 374 ~~gsL~~-----------~l~~~~~~~-----------------~~l~~~~~~---~-----------------i~~~ia 405 (619)
+++++.. .+|...... ..-+|.... + ....+-
T Consensus 93 ~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~ 172 (288)
T 3d1u_A 93 DERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVE 172 (288)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9876431 123221110 001232211 0 011112
Q ss_pred HHHHHHH----hcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 406 RGLEYLH----EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 406 ~~L~~LH----~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
+.+..+. ....+.++|+|+.+.||+++.+ .+.|.|| .+.
T Consensus 173 ~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 173 KVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 2223332 2235679999999999999884 5889999 664
No 404
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=1.2e-08 Score=94.90 Aligned_cols=111 Identities=15% Similarity=0.245 Sum_probs=84.5
Q ss_pred CCCeEEEEeCCC-Cccc----cCCccccCCCCCCEEEccCCCCCCC----CcccccccccCcEeeecCCCcccc----CC
Q 007073 75 SNNVASVTLSSM-NFSG----TLSPRIGVLRTLSTLTLKGNGITGE----IPEELGNLSSLTSLDLDNNRLVGK----IP 141 (619)
Q Consensus 75 ~~~l~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p 141 (619)
..+|++|+|++| .|.. .+...+...++|++|+|++|+|... +...+...++|++|+|++|.|... +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 357999999999 8874 2445566778999999999999742 344556668899999999999843 45
Q ss_pred Ccccccccchhhhc--cCCcCCCC----CCCccccccccccccCCCCccc
Q 007073 142 PSLGNLKKLQFLTL--SQNNFSGT----IPDSLTTLSSLISIQLDSNNLS 185 (619)
Q Consensus 142 ~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 185 (619)
..+...++|+.|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777889999999 88998732 2334555678999999999886
No 405
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.40 E-value=2e-06 Score=84.78 Aligned_cols=135 Identities=18% Similarity=0.128 Sum_probs=95.6
Q ss_pred ccccCCCc-eEEEEEeC-CCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc-CCCccceeeeeeCCCcceeEecccccch
Q 007073 301 VLGQGGFG-KVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYPFMQNLS 377 (619)
Q Consensus 301 ~lg~G~fg-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~gs 377 (619)
.+..|..| .||+.... ++..+++|+-. ......+.+|...++.+. +--+-++++++...+..++|||++++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~----~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGK----GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEE----THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECC----CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45556666 69998864 56789999764 234567889999998875 3235677888888888999999999987
Q ss_pred hhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 007073 378 VAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC------------------------------------------ 415 (619)
Q Consensus 378 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------------ 415 (619)
+.+..... ......++.++++.|+.||...
T Consensus 107 ~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 107 AFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 76654321 1122345555666666666421
Q ss_pred -------------CCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 416 -------------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 416 -------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999887778999998863
No 406
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.35 E-value=3.8e-06 Score=84.57 Aligned_cols=136 Identities=19% Similarity=0.212 Sum_probs=92.3
Q ss_pred cCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCC---Cccceeeeee-CCCcceeEecccc
Q 007073 299 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR---NLLRLIGFCT-TPTERLLVYPFMQ 374 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~e~~~ 374 (619)
.+.++.|....||+. |..+++|.-. .......+.+|.++++.+.+. .+.+.+.++. ..+..++||+|++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~---~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK---SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES---SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC---CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 456888999999988 5778888742 223456788999999998753 2445666664 3455789999999
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH---------------------------------------- 414 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~---------------------------------------- 414 (619)
|.++...... .++...+..++.++++.|+.||+.
T Consensus 97 G~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 97 GQILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp SEECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred CeECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 9887653211 023333444444444444444432
Q ss_pred -----------------CCCCeEecCCCCCcEEeCC---CCc-EEEccccccee
Q 007073 415 -----------------CNPKIIHRDVKAANVLLDE---DFE-AVVGDFGLAKL 447 (619)
Q Consensus 415 -----------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~DfGla~~ 447 (619)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999997 345 58999998874
No 407
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.33 E-value=7.7e-08 Score=106.40 Aligned_cols=127 Identities=14% Similarity=0.109 Sum_probs=68.1
Q ss_pred CCeEEEEeCCCCcccc----CCccccCCCCCCEEEccCCCCCC----CCcccccccccCcEeeecCCCccccCCCccccc
Q 007073 76 NNVASVTLSSMNFSGT----LSPRIGVLRTLSTLTLKGNGITG----EIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNL 147 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 147 (619)
++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++ .++..+.++++|+.|+|++|.+.+ +|..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhh
Confidence 3566666666665543 22333455666666666666652 233334456666666666666663 55556666
Q ss_pred ccchhhhccCCcCC---CCCCCccccccccccccCCCCcccccCCccc---cccCccccCCCC
Q 007073 148 KKLQFLTLSQNNFS---GTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNN 204 (619)
Q Consensus 148 ~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~l~~~~n~ 204 (619)
++|+.|+++++... +..+..+..+++|+.|+++++... .+|..+ .++..|++++|.
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCc
Confidence 66666666543222 122334555556666666554333 444333 355666666665
No 408
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.28 E-value=1.5e-07 Score=103.97 Aligned_cols=125 Identities=13% Similarity=0.014 Sum_probs=95.0
Q ss_pred CCCeEEEEeCCCCcc----ccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCcc---ccCCCccccc
Q 007073 75 SNNVASVTLSSMNFS----GTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLV---GKIPPSLGNL 147 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~~~~l 147 (619)
.++|+.|+|++|.++ +.++..+.++++|+.|+|++|.+. .+|..+.++++|+.|+++.+... +..+..+..+
T Consensus 191 ~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~ 269 (592)
T 3ogk_B 191 NTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFP 269 (592)
T ss_dssp CCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCC
T ss_pred CCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHHHHhhhhHHHhhcccccccccchHHHHHHhhcc
Confidence 468999999999997 344556678899999999999998 58888999999999999864433 3445667788
Q ss_pred ccchhhhccCCcCCCCCCCccccccccccccCCCCcccccCC----ccccccCccccC
Q 007073 148 KKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP----VHLFQIPKYNFT 201 (619)
Q Consensus 148 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p----~~l~~l~~l~~~ 201 (619)
++|+.|+++++... .+|..+..+++|+.|++++|.+++... ..+.++..|++.
T Consensus 270 ~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 270 RKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp TTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred ccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 88888888886544 677778888888888888888764433 233455555555
No 409
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.23 E-value=7.1e-06 Score=84.65 Aligned_cols=145 Identities=12% Similarity=0.110 Sum_probs=91.7
Q ss_pred cccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCC--ccceeeeeeCC-CcceeEeccc
Q 007073 297 SEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN--LLRLIGFCTTP-TERLLVYPFM 373 (619)
Q Consensus 297 ~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~e~~ 373 (619)
...+.++.|....+|+... +|..+++|.-... ..+..|..++..+.... +.++++++... ...++||||+
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 3456789999999999886 5889999976421 25889999999887544 45667766654 5678999999
Q ss_pred ccchhhhh------------------hcccCCCC-C------------CcCHHHH---------------------HHHH
Q 007073 374 QNLSVAYR------------------LREIKPGE-P------------VLDWVTR---------------------KRVA 401 (619)
Q Consensus 374 ~~gsL~~~------------------l~~~~~~~-~------------~l~~~~~---------------------~~i~ 401 (619)
+|.++.+. ++...... . .-.|... ....
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 98766421 11111000 0 0001100 0111
Q ss_pred HHHHHHHHHHHhc-CCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007073 402 LGAARGLEYLHEH-CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 448 (619)
Q Consensus 402 ~~ia~~L~~LH~~-~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 448 (619)
..+...+.++... ..+.++|+|+.+.||+++++..+.|+||+.+..-
T Consensus 197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 1222223333221 1246899999999999988777889999998753
No 410
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.16 E-value=4.3e-06 Score=86.10 Aligned_cols=82 Identities=10% Similarity=0.015 Sum_probs=55.3
Q ss_pred cCcc-ccCCCceEEEEEeC-------CCcEEEEEEeccCC--CcchHHHHHHHHHHHHHccC---CCccceeeeeeCC--
Q 007073 299 KNVL-GQGGFGKVYRGVLA-------DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVH---RNLLRLIGFCTTP-- 363 (619)
Q Consensus 299 ~~~l-g~G~fg~Vy~~~~~-------~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~-- 363 (619)
.+.| +.|....+|+.... ++..+++|+-.... .......+.+|+++++.+.. -.+.++++++...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88989999998764 26788898764321 00012456788888887753 2456777777654
Q ss_pred -CcceeEecccccchhhh
Q 007073 364 -TERLLVYPFMQNLSVAY 380 (619)
Q Consensus 364 -~~~~lv~e~~~~gsL~~ 380 (619)
...++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 34689999999877654
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.14 E-value=3.3e-08 Score=109.35 Aligned_cols=128 Identities=15% Similarity=0.140 Sum_probs=68.1
Q ss_pred CeEEEEeCCCCccccCCcccc-CCCCCCEEEcc--C----CCCCCC-----CcccccccccCcEeeecCCCccccCCCcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIG-VLRTLSTLTLK--G----NGITGE-----IPEELGNLSSLTSLDLDNNRLVGKIPPSL 144 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 144 (619)
+|+.|+++.|++++.....+. .+++|+.|+|+ + |.+++. ++..+.++++|+.|+|++ .+++..+..+
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l 451 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYI 451 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHH
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHH
Confidence 455555555555544333343 35666666666 3 444421 111244556666666655 4444433444
Q ss_pred cc-cccchhhhccCCcCCCCCCCcc-ccccccccccCCCCcccccCC----ccccccCccccCCCCC
Q 007073 145 GN-LKKLQFLTLSQNNFSGTIPDSL-TTLSSLISIQLDSNNLSGQIP----VHLFQIPKYNFTGNNL 205 (619)
Q Consensus 145 ~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p----~~l~~l~~l~~~~n~~ 205 (619)
.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|++++..+ ..+.++..|++++|+.
T Consensus 452 ~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 452 GTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 43 6667777777777654333333 446677777777777653322 2244566666666653
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.11 E-value=6.4e-08 Score=89.98 Aligned_cols=116 Identities=19% Similarity=0.222 Sum_probs=87.4
Q ss_pred ccCCccccCCCCCCEEEccCC-CCCCC----CcccccccccCcEeeecCCCcccc----CCCcccccccchhhhccCCcC
Q 007073 90 GTLSPRIGVLRTLSTLTLKGN-GITGE----IPEELGNLSSLTSLDLDNNRLVGK----IPPSLGNLKKLQFLTLSQNNF 160 (619)
Q Consensus 90 ~~~~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l 160 (619)
..+...+...++|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 344556777899999999999 88742 445567789999999999999732 334556668999999999999
Q ss_pred CCC----CCCccccccccccccC--CCCcccccCC----ccc---cccCccccCCCCC
Q 007073 161 SGT----IPDSLTTLSSLISIQL--DSNNLSGQIP----VHL---FQIPKYNFTGNNL 205 (619)
Q Consensus 161 ~~~----~p~~~~~l~~L~~L~l--~~N~l~~~~p----~~l---~~l~~l~~~~n~~ 205 (619)
... +...+...++|+.|+| ++|.|+..-- ..+ ..+..|++++|..
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 842 4556777789999999 8899984322 222 3577788888764
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.07 E-value=1.8e-07 Score=96.47 Aligned_cols=128 Identities=14% Similarity=0.209 Sum_probs=77.8
Q ss_pred CCCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCccccc--ccccCcEeeecC--CCcccc-----CCCcc-
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELG--NLSSLTSLDLDN--NRLVGK-----IPPSL- 144 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~- 144 (619)
.++|+.|+|++|.-. .+++ + .+++|+.|+|..|.++......+. .+++|+.|+|+. |...+. +...+
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 458889998877311 2333 3 378888888888877643333343 678888888753 221111 11122
Q ss_pred -cccccchhhhccCCcCCCCCCCccc---cccccccccCCCCccccc----CCc---cccccCccccCCCCC
Q 007073 145 -GNLKKLQFLTLSQNNFSGTIPDSLT---TLSSLISIQLDSNNLSGQ----IPV---HLFQIPKYNFTGNNL 205 (619)
Q Consensus 145 -~~l~~L~~L~l~~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~----~p~---~l~~l~~l~~~~n~~ 205 (619)
..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.+++. ++. .+.+|..|++++|.+
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 2467888888888887643222222 467888888888888753 332 245667777777654
No 414
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.98 E-value=2.5e-05 Score=79.61 Aligned_cols=141 Identities=16% Similarity=0.232 Sum_probs=79.9
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCC--Cccceee------eeeCCCcceeEec
Q 007073 300 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR--NLLRLIG------FCTTPTERLLVYP 371 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~------~~~~~~~~~lv~e 371 (619)
+.|+.|..+.||+....+| .+++|+... ....+..|.++++.+... .+.+++. +....+..+++|+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~-----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR-----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS-----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC-----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 4566678899999988654 589998864 123344566666555321 2233332 1123456789999
Q ss_pred ccccchhh--------------hhhcccCCC-----C-----CCcCHHHH------------------------------
Q 007073 372 FMQNLSVA--------------YRLREIKPG-----E-----PVLDWVTR------------------------------ 397 (619)
Q Consensus 372 ~~~~gsL~--------------~~l~~~~~~-----~-----~~l~~~~~------------------------------ 397 (619)
|++|..+. ..+|..... . ..-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 112211110 0 01122211
Q ss_pred -HHHHHHHHHHHHHHHh----------cCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 398 -KRVALGAARGLEYLHE----------HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 398 -~~i~~~ia~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
..+...+.+++.+|++ ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223446666763 124589999999999999888899999999875
No 415
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.98 E-value=3.2e-07 Score=101.41 Aligned_cols=116 Identities=18% Similarity=0.224 Sum_probs=72.9
Q ss_pred CCCeEEEEeCCCCccccCCcccc-CCCCCCEEEccCC-CCCCC-CcccccccccCcEeeecCCCccccCCCcc----ccc
Q 007073 75 SNNVASVTLSSMNFSGTLSPRIG-VLRTLSTLTLKGN-GITGE-IPEELGNLSSLTSLDLDNNRLVGKIPPSL----GNL 147 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l 147 (619)
..+|++|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 34778888888877766655554 5778888888877 44422 44444577888888888887765443333 356
Q ss_pred ccchhhhccCCcCCCCCC-Cc----cccccccccccCCCC-cccccCCcccc
Q 007073 148 KKLQFLTLSQNNFSGTIP-DS----LTTLSSLISIQLDSN-NLSGQIPVHLF 193 (619)
Q Consensus 148 ~~L~~L~l~~N~l~~~~p-~~----~~~l~~L~~L~l~~N-~l~~~~p~~l~ 193 (619)
++|+.|+|++|. . .++ .. +..+++|+.|++++| .++ .+|..+.
T Consensus 184 ~~L~~L~l~~~~-~-~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~ 232 (594)
T 2p1m_B 184 TSLVSLNISCLA-S-EVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQ 232 (594)
T ss_dssp CCCCEEECTTCC-S-CCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHH
T ss_pred CcCcEEEecccC-C-cCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHh
Confidence 678888888776 1 222 11 234577888888877 344 3554443
No 416
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.94 E-value=9.5e-06 Score=84.89 Aligned_cols=124 Identities=14% Similarity=0.128 Sum_probs=90.7
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCcc-----ccCCCcccccccc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLV-----GKIPPSLGNLKKL 150 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L 150 (619)
.+|+.|+|..| ++.+-...|.. .+|+.+.| .|.++..-+..|.++++|+.++|.+|.+. ..-+..|.+|++|
T Consensus 226 ~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 226 SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 47888888864 66566667777 78999999 45566455778889999999999888775 3556788889999
Q ss_pred hhhhccCCcCCCCCCCccccccccccccCCCCcccccCC-cccc--ccCccccCCCCC
Q 007073 151 QFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLF--QIPKYNFTGNNL 205 (619)
Q Consensus 151 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~--~l~~l~~~~n~~ 205 (619)
+.++|. |.++..-..+|.+|++|+.+++.+| ++ .|+ ..|. +|..+.+.+|..
T Consensus 303 ~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 303 ARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp CEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSSCCCEEEECCSSC
T ss_pred CeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCCCCCEEEEcCCCC
Confidence 999998 4577444567888899999998655 65 444 3343 566677777754
No 417
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.94 E-value=4.4e-05 Score=79.72 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=49.8
Q ss_pred cCccccCCCceEEEEEeC-CCcEEEEEEeccCCC------cchHHHHHHHHHHHHHccC--CCcc-ceeeeeeCCCccee
Q 007073 299 KNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES------PGGDAAFQREVEMISVAVH--RNLL-RLIGFCTTPTERLL 368 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~~E~~~l~~l~H--~niv-~l~~~~~~~~~~~l 368 (619)
.+.||.|.++.||++... +++.++||....... ......+..|.++++.+.. +..+ +++.+ ..+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999754 468899998653211 1123456779999887743 4444 44443 3455789
Q ss_pred Eecccccc
Q 007073 369 VYPFMQNL 376 (619)
Q Consensus 369 v~e~~~~g 376 (619)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 418
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.86 E-value=4e-05 Score=80.72 Aligned_cols=80 Identities=13% Similarity=0.033 Sum_probs=49.1
Q ss_pred CCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeeeccccccccccccccCC---CCCcchhhHHHHHHHHHH
Q 007073 416 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG---KSSERTDVFGYGIMLLEL 492 (619)
Q Consensus 416 ~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~S~Gv~l~el 492 (619)
.+.++|||++|.||+++.++ ++++||+.+..-.....-......-...|++|+..... ......++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 34799999999999999876 99999999875431100000000012346676655321 112345566788888887
Q ss_pred HhCC
Q 007073 493 VTGQ 496 (619)
Q Consensus 493 ltg~ 496 (619)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 419
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.86 E-value=2e-06 Score=88.56 Aligned_cols=128 Identities=16% Similarity=0.216 Sum_probs=75.0
Q ss_pred CCCeEEEEeCCCCcc---------ccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCccc
Q 007073 75 SNNVASVTLSSMNFS---------GTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLG 145 (619)
Q Consensus 75 ~~~l~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 145 (619)
..+|+.|.+.++... +.++..+..+|+|+.|+|++|.-. .+|. + .+++|+.|+|..|.++...-..+.
T Consensus 138 l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 138 FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 357777877655331 123344566788888888877311 2333 3 377888888887776633223333
Q ss_pred --ccccchhhhccC--CcCCCC-----CCCcc--ccccccccccCCCCcccccCCc------cccccCccccCCCCC
Q 007073 146 --NLKKLQFLTLSQ--NNFSGT-----IPDSL--TTLSSLISIQLDSNNLSGQIPV------HLFQIPKYNFTGNNL 205 (619)
Q Consensus 146 --~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~p~------~l~~l~~l~~~~n~~ 205 (619)
.+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+.+..+. .+.++..|+++.|..
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 677888888753 222111 11112 2467888888888887643332 244677777777654
No 420
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.74 E-value=4.4e-05 Score=79.80 Aligned_cols=104 Identities=10% Similarity=0.119 Sum_probs=49.1
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
+|+.++|++|+++.+....|. ..+|+.+.|.+| ++..-...|.++++|+.++|.+| ++..-...|.+ .+|+.+.|
T Consensus 181 ~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l- 255 (401)
T 4fdw_A 181 NLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL- 255 (401)
T ss_dssp TCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-
T ss_pred cCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-
Confidence 444444444444433333332 344444444422 33233344555555555555543 33222233333 34444444
Q ss_pred CCcCCCCCCCccccccccccccCCCCccc
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLS 185 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 185 (619)
.|.++..-+.+|.+|++|+.+++.+|.+.
T Consensus 256 p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 256 PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 23344233556777777877777776654
No 421
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.74 E-value=0.00016 Score=72.63 Aligned_cols=140 Identities=16% Similarity=0.182 Sum_probs=92.2
Q ss_pred ccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHcc---CCCccceeeeeeCCCcceeEecccc
Q 007073 298 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV---HRNLLRLIGFCTTPTERLLVYPFMQ 374 (619)
Q Consensus 298 ~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~e~~~ 374 (619)
..+.|+.|....+|+... ++..+++|+... .....+..|.+.++.+. ...+.++++++...+..++||||++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~----~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINER----SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEG----GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCc----ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 346789999999999986 467889998653 23567889999988875 2557788888887788999999999
Q ss_pred cchhhh-----------hhcccCC-C-----------------CCCcCHHHHH---HHHH----------------HHHH
Q 007073 375 NLSVAY-----------RLREIKP-G-----------------EPVLDWVTRK---RVAL----------------GAAR 406 (619)
Q Consensus 375 ~gsL~~-----------~l~~~~~-~-----------------~~~l~~~~~~---~i~~----------------~ia~ 406 (619)
+..+.. .|+.... . ...-+|.... ++.. .+.+
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 875421 2232211 0 0012344321 1111 1111
Q ss_pred -HHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007073 407 -GLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFG 443 (619)
Q Consensus 407 -~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 443 (619)
....|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1223321 2356899999999999999887 8899974
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.69 E-value=0.00012 Score=72.88 Aligned_cols=78 Identities=24% Similarity=0.288 Sum_probs=55.8
Q ss_pred CCcccCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCC---CccceeeeeeCCCcceeEec
Q 007073 295 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR---NLLRLIGFCTTPTERLLVYP 371 (619)
Q Consensus 295 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e 371 (619)
.....+.+|.|..+.||+....||+.|.||+-.... ......|..|.+.|+.+.-. -+.+++++. ..++|||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e 90 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence 455567899999999999999999999999865322 23345678999999988532 234444432 3578999
Q ss_pred ccccch
Q 007073 372 FMQNLS 377 (619)
Q Consensus 372 ~~~~gs 377 (619)
|++++.
T Consensus 91 ~l~~~~ 96 (288)
T 3f7w_A 91 WVDERP 96 (288)
T ss_dssp CCCCCC
T ss_pred eecccC
Confidence 987653
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.44 E-value=2.8e-05 Score=70.65 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=50.5
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCC-CCCCCccccccc----ccCcEeeecCCC-ccccCCCcccccccc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNG-ITGEIPEELGNL----SSLTSLDLDNNR-LVGKIPPSLGNLKKL 150 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 150 (619)
+|++|||+++.++..--..+..+++|+.|+|+++. |+..--..+..+ ++|++|+|+++. |+..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 57888888777765433456677777777777774 553333334443 367777777763 653222345566666
Q ss_pred hhhhccCCc
Q 007073 151 QFLTLSQNN 159 (619)
Q Consensus 151 ~~L~l~~N~ 159 (619)
+.|+|++..
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 424
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.29 E-value=0.00073 Score=68.07 Aligned_cols=158 Identities=12% Similarity=0.080 Sum_probs=86.5
Q ss_pred CHHHHHHHhcCCcc-----cCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCc--ccee
Q 007073 285 SWRELQLATDNFSE-----KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL--LRLI 357 (619)
Q Consensus 285 ~~~el~~~~~~~~~-----~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~ 357 (619)
+.+++......|.. .+.|+.|....+|+....+| .+++|....... ...+..|++++..+...++ .+++
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCCccc
Confidence 34455544445544 24567788899999987655 688998764211 2345567777776643222 2333
Q ss_pred ee------eeCCCcceeEecccccchhhh--------------hhcccCC----CC----CCcCHHHHHH----------
Q 007073 358 GF------CTTPTERLLVYPFMQNLSVAY--------------RLREIKP----GE----PVLDWVTRKR---------- 399 (619)
Q Consensus 358 ~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~----~~----~~l~~~~~~~---------- 399 (619)
.. ....+..+++++|++|..+.. .++.... .. ....|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 112345678999998764321 1221110 00 0012222110
Q ss_pred --HHHHHHHHHHHHHhc----CCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 400 --VALGAARGLEYLHEH----CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 400 --i~~~ia~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
+...+.+.++++++. ...+++|+|+.+.||+++++..+.|+||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244555666532 13479999999999999987666899999876
No 425
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.28 E-value=0.00091 Score=67.80 Aligned_cols=143 Identities=17% Similarity=0.081 Sum_probs=72.1
Q ss_pred cCccccCCCce-EEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCC--ccceeeeeeCCCcceeEeccccc
Q 007073 299 KNVLGQGGFGK-VYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN--LLRLIGFCTTPTERLLVYPFMQN 375 (619)
Q Consensus 299 ~~~lg~G~fg~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~ 375 (619)
.+.|+.|+... +|+....+|..+++|...... ...+..|+++++.+.... +.+++.+... ..+++||++.+
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~--~g~ll~e~l~~ 96 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE----GGDTQPFVDLAQYLRNLDISAPEIYAEEHA--RGLLLIEDLGD 96 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTT----TCCSHHHHHHHHHHHHTTCBCCCEEEEETT--TTEEEECCCCS
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCC----CccccHHHHHHHHHHhCCCCCCceeeecCC--CCEEEEeeCCC
Confidence 34566665554 678776447778787643221 023345677766664323 4456665332 23789999876
Q ss_pred chhhhhhcc---------------------cCCC-CCCcCHHHHH-------H-------------HHHHHHHHHHHHHh
Q 007073 376 LSVAYRLRE---------------------IKPG-EPVLDWVTRK-------R-------------VALGAARGLEYLHE 413 (619)
Q Consensus 376 gsL~~~l~~---------------------~~~~-~~~l~~~~~~-------~-------------i~~~ia~~L~~LH~ 413 (619)
..+.+.+.. .... ...++..... . ....+.+.+..+.+
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 555433211 1000 0111111000 0 00111222233311
Q ss_pred ---cCCCCeEecCCCCCcEEeCCC----CcEEEccccccee
Q 007073 414 ---HCNPKIIHRDVKAANVLLDED----FEAVVGDFGLAKL 447 (619)
Q Consensus 414 ---~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla~~ 447 (619)
...+.++|||+.+.||+++.+ ..+.|+||+.+..
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123479999999999999875 6899999998874
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.28 E-value=2.1e-05 Score=71.45 Aligned_cols=91 Identities=10% Similarity=0.013 Sum_probs=67.1
Q ss_pred CccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCC-ccccCCCccccc----ccchhhhccCCc-CCCCCCC
Q 007073 93 SPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNR-LVGKIPPSLGNL----KKLQFLTLSQNN-FSGTIPD 166 (619)
Q Consensus 93 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~ 166 (619)
|.....-.+|+.|||+++.|+..--..+.++++|+.|+|+++. |+..--..++.+ ++|+.|+|+++. |+..-=.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4433233579999999999986655668899999999999995 774333345543 479999999975 7632223
Q ss_pred ccccccccccccCCCCc
Q 007073 167 SLTTLSSLISIQLDSNN 183 (619)
Q Consensus 167 ~~~~l~~L~~L~l~~N~ 183 (619)
.+..+++|+.|+++++.
T Consensus 134 ~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HGGGCTTCCEEEEESCT
T ss_pred HHhcCCCCCEEECCCCC
Confidence 46788999999999885
No 427
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.24 E-value=0.00098 Score=70.15 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=50.5
Q ss_pred cCccccCCCceEEEEEeCC--------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCc-cceeeeeeCCCcceeE
Q 007073 299 KNVLGQGGFGKVYRGVLAD--------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL-LRLIGFCTTPTERLLV 369 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv 369 (619)
.+.|+.|....||+....+ +..+++|+.... .....+..|..+++.+...++ .++++.+.. .+|
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v 150 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 150 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEE
Confidence 4568889999999998753 578999987431 122456689999888764444 456665432 389
Q ss_pred ecccccchh
Q 007073 370 YPFMQNLSV 378 (619)
Q Consensus 370 ~e~~~~gsL 378 (619)
+||++|.++
T Consensus 151 ~e~l~G~~l 159 (429)
T 1nw1_A 151 EEYIPSRPL 159 (429)
T ss_dssp ECCCCEEEC
T ss_pred EEEeCCccc
Confidence 999986544
No 428
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.16 E-value=0.002 Score=64.18 Aligned_cols=71 Identities=10% Similarity=0.058 Sum_probs=45.0
Q ss_pred cCccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCcc-ceeeeeeCCCcceeEeccc-ccc
Q 007073 299 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL-RLIGFCTTPTERLLVYPFM-QNL 376 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~lv~e~~-~~g 376 (619)
.+.|+.|....+|+. ..+++|+-...... .....+|+.+++.+...++. +++++ .++..++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 567899999999999 56888877532111 11235688887777543443 45543 344467899999 654
Q ss_pred hh
Q 007073 377 SV 378 (619)
Q Consensus 377 sL 378 (619)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.08 E-value=0.00047 Score=59.47 Aligned_cols=56 Identities=23% Similarity=0.275 Sum_probs=39.1
Q ss_pred EEEeCCCCcc-ccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCcc
Q 007073 80 SVTLSSMNFS-GTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLV 137 (619)
Q Consensus 80 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 137 (619)
.++.++++|+ ..+|..+ -++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6777788876 3445432 346788888888888555566777888888888888665
No 430
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.04 E-value=0.0044 Score=62.41 Aligned_cols=143 Identities=15% Similarity=0.149 Sum_probs=82.0
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCC--ccceeee-----eeCCCcceeEecc
Q 007073 300 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN--LLRLIGF-----CTTPTERLLVYPF 372 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~-----~~~~~~~~lv~e~ 372 (619)
..++ |....||+....+|+.+++|...... .....+..|..++..+.... +.+++.. ....+..+++|+|
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 3466 88889999887778889999885321 13456677888887775322 3344433 1113345679999
Q ss_pred cccchhhh--------------hhcccCC-----CCCCcCHHHH----HHH---------------HHHHHHHHHHHHhc
Q 007073 373 MQNLSVAY--------------RLREIKP-----GEPVLDWVTR----KRV---------------ALGAARGLEYLHEH 414 (619)
Q Consensus 373 ~~~gsL~~--------------~l~~~~~-----~~~~l~~~~~----~~i---------------~~~ia~~L~~LH~~ 414 (619)
++|..+.. .+|.... ....+++... ..+ ...+.+.++.+.+.
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 98755421 0111100 0111222111 000 11111223333321
Q ss_pred ----CCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 415 ----CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 415 ----~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234688999999999999 4 899999998763
No 431
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.96 E-value=0.00073 Score=70.29 Aligned_cols=88 Identities=10% Similarity=0.164 Sum_probs=45.8
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCCCCCCCcccc
Q 007073 91 TLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTT 170 (619)
Q Consensus 91 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 170 (619)
+-...|....+|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-...|.++++|+.++|..| ++..-..+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 33445555666666666544433 344455566666666664 3344233445556666666666543 43222345556
Q ss_pred ccccccccCCC
Q 007073 171 LSSLISIQLDS 181 (619)
Q Consensus 171 l~~L~~L~l~~ 181 (619)
|.+|+.+.+..
T Consensus 333 C~~L~~i~ip~ 343 (394)
T 4gt6_A 333 CEQLERIAIPS 343 (394)
T ss_dssp CTTCCEEEECT
T ss_pred CCCCCEEEECc
Confidence 66666666543
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.92 E-value=0.0013 Score=56.60 Aligned_cols=57 Identities=25% Similarity=0.325 Sum_probs=47.6
Q ss_pred CEEEccCCCCC-CCCcccccccccCcEeeecCCCccccCCCcccccccchhhhccCCcCC
Q 007073 103 STLTLKGNGIT-GEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFS 161 (619)
Q Consensus 103 ~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 161 (619)
..++.+++.|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999997 46775443 57999999999999666677899999999999999885
No 433
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.83 E-value=0.0024 Score=65.88 Aligned_cols=102 Identities=15% Similarity=0.127 Sum_probs=54.1
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
.++.+.+..+ +..+....|.....|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 4555555433 33344455556666666666544 44233445555666666666443 332334455666666666666
Q ss_pred CCcCCCCCCCccccccccccccCCC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDS 181 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~ 181 (619)
+|.++..-+.+|.+|.+|+.+.|..
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCT
T ss_pred ccccceehhhhhcCCCCCCEEEcCc
Confidence 6655523344555666666666643
No 434
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.83 E-value=0.0036 Score=64.38 Aligned_cols=74 Identities=9% Similarity=0.038 Sum_probs=44.4
Q ss_pred cCccccCCCceEEEEEeCC---------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCcc-ceeeeeeCCCccee
Q 007073 299 KNVLGQGGFGKVYRGVLAD---------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL-RLIGFCTTPTERLL 368 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~l 368 (619)
.+.|+.|....+|+....+ +..+++|+..... ........|.++++.+...+++ ++++.. ...+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~ 111 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGR 111 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cceecHHHHHHHHHHHHhcCCCCceEEec----CCcE
Confidence 3567888899999998754 2678888764321 1111235788888877644443 565543 2478
Q ss_pred Eecccccchh
Q 007073 369 VYPFMQNLSV 378 (619)
Q Consensus 369 v~e~~~~gsL 378 (619)
||+|++|.++
T Consensus 112 v~e~i~G~~l 121 (369)
T 3c5i_A 112 IEEWLYGDPL 121 (369)
T ss_dssp EEECCCSEEC
T ss_pred EEEEecCCcC
Confidence 9999987544
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.81 E-value=0.0001 Score=68.21 Aligned_cols=110 Identities=14% Similarity=0.188 Sum_probs=66.2
Q ss_pred CCeEEEEeCCC-Cccc----cCCccccCCCCCCEEEccCCCCCC----CCcccccccccCcEeeecCCCcccc----CCC
Q 007073 76 NNVASVTLSSM-NFSG----TLSPRIGVLRTLSTLTLKGNGITG----EIPEELGNLSSLTSLDLDNNRLVGK----IPP 142 (619)
Q Consensus 76 ~~l~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~ 142 (619)
..|++|+|++| +|.. .+...+..=+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|+|... +-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 46888888875 6653 233455556778888888888873 2334455567788888888888732 122
Q ss_pred cccccccchhhhccCCcC---CC----CCCCccccccccccccCCCCccc
Q 007073 143 SLGNLKKLQFLTLSQNNF---SG----TIPDSLTTLSSLISIQLDSNNLS 185 (619)
Q Consensus 143 ~~~~l~~L~~L~l~~N~l---~~----~~p~~~~~l~~L~~L~l~~N~l~ 185 (619)
.+..-+.|+.|+|++|.. .. .+-..+..-+.|+.|+++.|.+.
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 344445677777776533 21 01122333356667777666543
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.76 E-value=0.0079 Score=63.60 Aligned_cols=75 Identities=12% Similarity=0.116 Sum_probs=48.4
Q ss_pred cCccccCCCceEEEEEeCC-CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCcc-ceeeeeeCCCcceeEecccccc
Q 007073 299 KNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL-RLIGFCTTPTERLLVYPFMQNL 376 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~lv~e~~~~g 376 (619)
.+.|+.|-...+|+....+ +..+++|+..... .. ..+..+|..+++.+...++. ++++++. ...|+||++|.
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~----~G~v~e~I~G~ 186 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DE-IINREREKKISCILYNKNIAKKIYVFFT----NGRIEEFMDGY 186 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CS-CSCHHHHHHHHHHHTTSSSBCCEEEEET----TEEEEECCCSE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC----CeEEEEeeCCc
Confidence 4568889999999999865 4788888764321 11 11125789999988765554 5666652 23599999876
Q ss_pred hhh
Q 007073 377 SVA 379 (619)
Q Consensus 377 sL~ 379 (619)
++.
T Consensus 187 ~l~ 189 (458)
T 2qg7_A 187 ALS 189 (458)
T ss_dssp ECC
T ss_pred cCC
Confidence 553
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.70 E-value=0.0082 Score=61.77 Aligned_cols=143 Identities=15% Similarity=0.182 Sum_probs=82.9
Q ss_pred cCccccCCCceEEEEEeC--------CCcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCc-cceeeeeeCCCcceeE
Q 007073 299 KNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL-LRLIGFCTTPTERLLV 369 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv 369 (619)
.+.|..|-...+|+.... +++.+++|+-.. . ......+.+|.++++.+...++ .++++++.. .+|
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-I-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-c-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 356778999999999874 257899987532 1 2234566789999988763333 456665543 389
Q ss_pred ecccccchhhhh-----------------hcccC-CCCCCcC--HHHHHHHHHHHH-------------------HHHHH
Q 007073 370 YPFMQNLSVAYR-----------------LREIK-PGEPVLD--WVTRKRVALGAA-------------------RGLEY 410 (619)
Q Consensus 370 ~e~~~~gsL~~~-----------------l~~~~-~~~~~l~--~~~~~~i~~~ia-------------------~~L~~ 410 (619)
|||++|.++... +|... +...... +.+..++..++. ..+..
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 999998665421 11111 1111112 333344433321 12333
Q ss_pred HHh----c-CCCCeEecCCCCCcEEeCCC----CcEEEccccccee
Q 007073 411 LHE----H-CNPKIIHRDVKAANVLLDED----FEAVVGDFGLAKL 447 (619)
Q Consensus 411 LH~----~-~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla~~ 447 (619)
|.+ . ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 322 1 23368899999999999876 7899999998863
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.69 E-value=0.0095 Score=60.41 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=27.8
Q ss_pred CCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007073 417 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 447 (619)
Q Consensus 417 ~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 447 (619)
..++|+|+.+.||++++++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4699999999999999888899999988764
No 439
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.58 E-value=0.0016 Score=67.71 Aligned_cols=114 Identities=15% Similarity=0.109 Sum_probs=83.1
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
.++.+.+..+. +....|..+.+|+.+.+.++ ++..-..+|.++++|+.++|.++ ++..-...|.+|++|+.+++.
T Consensus 277 ~l~~~~~~~~~---i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp 351 (394)
T 4fs7_A 277 GLKKVIYGSVI---VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFP 351 (394)
T ss_dssp TCCEEEECSSE---ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCC
T ss_pred ccceeccCcee---eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEEC
Confidence 55666665543 33456788999999999765 66455677999999999999765 774556789999999999998
Q ss_pred CCcCCCCCCCccccccccccccCCCCcccccCCccccccCcc
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKY 198 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~l 198 (619)
.| ++..-..+|.+|++|+.+++..| ++ .+...+.+.++|
T Consensus 352 ~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L 390 (394)
T 4fs7_A 352 LS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKF 390 (394)
T ss_dssp TT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEE
T ss_pred cc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCC
Confidence 77 66344668999999999998654 33 344445554444
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.47 E-value=0.0024 Score=66.32 Aligned_cols=114 Identities=13% Similarity=0.045 Sum_probs=87.8
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
..++.+.+..+... +....|.....|+.+.+..+.+. ...|..+.+|+.+.+.+| ++..-...|.++++|+.++|
T Consensus 253 ~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~l 327 (394)
T 4fs7_A 253 TDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDL 327 (394)
T ss_dssp SSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECC
T ss_pred ccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEe
Confidence 46888888877554 77778899999999998876543 346889999999999876 66455678999999999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCcccccCC-ccccccCc
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPK 197 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~ 197 (619)
.++ ++..-..+|.+|++|+.+++..| ++ .|+ ..|.++.+
T Consensus 328 p~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~ 367 (394)
T 4fs7_A 328 PYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCIN 367 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTT
T ss_pred CCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCC
Confidence 754 76344678999999999999877 76 555 45554433
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.37 E-value=0.002 Score=67.02 Aligned_cols=106 Identities=13% Similarity=0.167 Sum_probs=84.2
Q ss_pred CCeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhc
Q 007073 76 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 155 (619)
Q Consensus 76 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 155 (619)
..|+.+.+.++... +-...|.++++|+.+.+. +.++..-...|.++++|+.++|..| ++..-...|.+|++|+.+.|
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 46888888765443 667788899999999996 5566455678999999999999876 66455678999999999999
Q ss_pred cCCcCCCCCCCccccccccccccCCCCccc
Q 007073 156 SQNNFSGTIPDSLTTLSSLISIQLDSNNLS 185 (619)
Q Consensus 156 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 185 (619)
..+ ++..-..+|.+|++|+.+++.+|...
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 755 66344568999999999999988654
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.19 E-value=0.0082 Score=61.79 Aligned_cols=100 Identities=16% Similarity=0.114 Sum_probs=45.7
Q ss_pred CeEEEEeCCCCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 77 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 77 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
.|+.+.+..+ ++.+-...|....+|+.+.+..+ ++......|.++++|+.+.+.+|.++..-...|.++++|+.+.|.
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcC
Confidence 3444444433 33333444445555555555432 332223345555555555555555543333445555555555554
Q ss_pred CCcCCCCCCCccccccccccccC
Q 007073 157 QNNFSGTIPDSLTTLSSLISIQL 179 (619)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~l 179 (619)
.| ++..-..+|.+|++|+.+.+
T Consensus 319 ~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 319 TA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TT-CCEECTTTTTTCTTCCCCCC
T ss_pred cc-ccEEHHHHhhCCCCCCEEEE
Confidence 32 33122334555555555544
No 443
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.12 E-value=0.018 Score=53.55 Aligned_cols=104 Identities=16% Similarity=0.096 Sum_probs=67.0
Q ss_pred cchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007073 375 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 454 (619)
Q Consensus 375 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 454 (619)
.-+|.+.|..+ +.+++..+++.++.|.+.+|.-+-.+..+ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 32 ~vSL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 32 ALSLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred cccHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc--------
Confidence 44788888764 35699999999999999998776321111 1233457889999999887763 1110
Q ss_pred eeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCC
Q 007073 455 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRA 498 (619)
Q Consensus 455 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p 498 (619)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1233567888763 3557889999999999998865444
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.64 E-value=0.036 Score=57.29 Aligned_cols=143 Identities=20% Similarity=0.219 Sum_probs=81.4
Q ss_pred CccccCCCceEEEEEeCC--------CcEEEEEEeccCCCc----------ch-------HHHHHHHHHHHHHccCCCc-
Q 007073 300 NVLGQGGFGKVYRGVLAD--------GTKVAVKRLTDFESP----------GG-------DAAFQREVEMISVAVHRNL- 353 (619)
Q Consensus 300 ~~lg~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~----------~~-------~~~~~~E~~~l~~l~H~ni- 353 (619)
+.|..|-...+|+....+ +..|.++..-..... .. .+....|..+++.+...++
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 457778889999998754 367888875332110 00 1123358888888764444
Q ss_pred cceeeeeeCCCcceeEecccccchhhhh-----------------hcccC-CCCCCcC--HHHHHHHHHHHH--------
Q 007073 354 LRLIGFCTTPTERLLVYPFMQNLSVAYR-----------------LREIK-PGEPVLD--WVTRKRVALGAA-------- 405 (619)
Q Consensus 354 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~~-~~~~~l~--~~~~~~i~~~ia-------- 405 (619)
.++++++.. .+|+||+++-+|... +|... +...... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 456666532 289999997554321 11111 1111122 223333332221
Q ss_pred --------------HHHH----HHHhc-CCCCeEecCCCCCcEEeCCC------CcEEEcccccce
Q 007073 406 --------------RGLE----YLHEH-CNPKIIHRDVKAANVLLDED------FEAVVGDFGLAK 446 (619)
Q Consensus 406 --------------~~L~----~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~DfGla~ 446 (619)
.-+. +|... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 23222 23358899999999999876 789999999886
No 445
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.60 E-value=0.0011 Score=61.24 Aligned_cols=89 Identities=12% Similarity=0.140 Sum_probs=63.2
Q ss_pred cccCCCCCCEEEccCC-CCCC----CCcccccccccCcEeeecCCCccccC----CCcccccccchhhhccCCcCCCC--
Q 007073 95 RIGVLRTLSTLTLKGN-GITG----EIPEELGNLSSLTSLDLDNNRLVGKI----PPSLGNLKKLQFLTLSQNNFSGT-- 163 (619)
Q Consensus 95 ~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~l~~N~l~~~-- 163 (619)
.+.+-+.|+.|+|++| +|.. .+-..+..-+.|+.|+|++|+|...- -..+..-+.|+.|+|++|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3445678999999986 7763 24455667789999999999998332 23344567899999999999732
Q ss_pred --CCCccccccccccccCCCCc
Q 007073 164 --IPDSLTTLSSLISIQLDSNN 183 (619)
Q Consensus 164 --~p~~~~~l~~L~~L~l~~N~ 183 (619)
+-.++..-+.|+.|+|++|.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHhhCCceeEEECCCCc
Confidence 22234444679999998763
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.98 E-value=0.078 Score=55.26 Aligned_cols=74 Identities=7% Similarity=0.038 Sum_probs=48.3
Q ss_pred cCccccCCCceEEEEEeCC--------CcEEEEEEeccCCCcchHHHHHHHHHHHHHccCCCc-cceeeeeeCCCcceeE
Q 007073 299 KNVLGQGGFGKVYRGVLAD--------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL-LRLIGFCTTPTERLLV 369 (619)
Q Consensus 299 ~~~lg~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv 369 (619)
.+.+..|-...+|+....+ +..+++|+.... +. ..-+..+|.++++.+...++ .++++.+ ..+.|
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~-t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I 148 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH-VG-KFYDSKVELDVFRYLSNINIAPNIIADF----PEGRI 148 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCC-C--CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCC-cc-hhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEE
Confidence 4567788899999999753 578888875432 11 11223578888887754344 3455433 24789
Q ss_pred ecccccchh
Q 007073 370 YPFMQNLSV 378 (619)
Q Consensus 370 ~e~~~~gsL 378 (619)
++|++|.++
T Consensus 149 ~efI~G~~l 157 (424)
T 3mes_A 149 EEFIDGEPL 157 (424)
T ss_dssp EECCCSEEC
T ss_pred EEEeCCccC
Confidence 999998664
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.37 E-value=0.15 Score=52.70 Aligned_cols=29 Identities=28% Similarity=0.470 Sum_probs=25.1
Q ss_pred eEecCCCCCcEEe------CCCCcEEEccccccee
Q 007073 419 IIHRDVKAANVLL------DEDFEAVVGDFGLAKL 447 (619)
Q Consensus 419 ivH~Dlkp~NIll------~~~~~~kl~DfGla~~ 447 (619)
++|+|+.+.||++ +++..++++||-+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=90.74 E-value=0.91 Score=42.02 Aligned_cols=116 Identities=11% Similarity=0.097 Sum_probs=79.4
Q ss_pred cCCCccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007073 349 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 428 (619)
Q Consensus 349 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 428 (619)
.||+++.. .+-.+.+...+.|+.-+.+.=...++. .+...+++++.+|+....+++.. +|=-+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~-------~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKS-------FTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGG-------SCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHh-------cCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 57888765 455556666666665443222222333 67889999999999988777655 788899999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 007073 429 VLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 500 (619)
Q Consensus 429 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~ 500 (619)
++++.++.+++.=.|+... ++|. ..++..=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~------------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNV------------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTT------------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccC------------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999986665322 2222 12222334478889999999988774
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=86.62 E-value=0.12 Score=54.67 Aligned_cols=62 Identities=10% Similarity=0.007 Sum_probs=18.5
Q ss_pred cccCccccCCCceEEEEEeCC-CcEEEE------EEeccCC-CcchHHHHHHHHHHHHHccCCCccceeeeee
Q 007073 297 SEKNVLGQGGFGKVYRGVLAD-GTKVAV------KRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCT 361 (619)
Q Consensus 297 ~~~~~lg~G~fg~Vy~~~~~~-g~~vAv------K~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 361 (619)
.+.+.|| ||.||+|.+.. ..+||| |..+... +.+....|.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3456676 99999999864 368899 7765422 2334457888999999999999999988764
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.69 E-value=1.7 Score=40.38 Aligned_cols=115 Identities=14% Similarity=0.165 Sum_probs=77.0
Q ss_pred cCCCccceeeeeeCCCcceeEecccccchhhhhhcccCCCCCCcCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCCC
Q 007073 349 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE-YLHEHCNPKIIHRDVKAA 427 (619)
Q Consensus 349 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~ivH~Dlkp~ 427 (619)
.||.+ -..+-.+.+...+.|+.-+++.=...++. .+...+++++.+++.... +++.. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-------~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-------TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-------SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-------cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 47777 34444666666676765544333333332 678889999999988777 66654 78889999
Q ss_pred cEEeCCCCcEEEcccccceeeccCCcceeeeccccccccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 007073 428 NVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 500 (619)
Q Consensus 428 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~elltg~~p~~ 500 (619)
|+++|.++.+++.-.|+-. -++|.-+ ++.-=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~------------------~lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKE------------------SLPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETT------------------TBSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcc------------------cCCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998666532 3334321 222223478888899998887663
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=77.23 E-value=0.14 Score=34.17 Aligned_cols=25 Identities=36% Similarity=0.472 Sum_probs=12.2
Q ss_pred EEEeeeechhhhhhcceeeeeeccc
Q 007073 232 IIVGIVGGLIVLISGGLLFFLCKGR 256 (619)
Q Consensus 232 ~i~~i~~~~~~~~~~~~~~~~~~~r 256 (619)
+..++++|+++++++++.++++.||
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhh
Confidence 4446666666555444443333333
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=69.88 E-value=0.14 Score=33.96 Aligned_cols=25 Identities=40% Similarity=0.756 Sum_probs=12.5
Q ss_pred EEEeeeechhhhhhcceeeeeeccc
Q 007073 232 IIVGIVGGLIVLISGGLLFFLCKGR 256 (619)
Q Consensus 232 ~i~~i~~~~~~~~~~~~~~~~~~~r 256 (619)
+..++++|+++++++++.++++.||
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhh
Confidence 4446666666655444443333333
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=48.70 E-value=15 Score=29.19 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=16.8
Q ss_pred cccccccccCcEeeecCCCccccCCCcccccccchhhhcc
Q 007073 117 PEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 156 (619)
Q Consensus 117 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 156 (619)
...|.++++|+.+.|..+ ++..-...|.+|.+|+.+.+.
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 334445555555554443 221223344444444444443
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=35.33 E-value=64 Score=25.40 Aligned_cols=49 Identities=14% Similarity=0.066 Sum_probs=38.6
Q ss_pred CCccccCCccccCCCCCCEEEccCCCCCCCCcccccccccCcEeeecCCC
Q 007073 86 MNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNR 135 (619)
Q Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 135 (619)
..++.+-...|.+.++|+.+.|-.+ ++.+-..+|.++.+|+.+.+....
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 4566666778899999999999875 554667789999999999987653
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=31.37 E-value=2.4 Score=27.67 Aligned_cols=13 Identities=31% Similarity=0.779 Sum_probs=6.7
Q ss_pred EEEeeeechhhhh
Q 007073 232 IIVGIVGGLIVLI 244 (619)
Q Consensus 232 ~i~~i~~~~~~~~ 244 (619)
++.++++|+++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 3445555555544
No 456
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=29.89 E-value=16 Score=23.21 Aligned_cols=26 Identities=12% Similarity=0.268 Sum_probs=10.1
Q ss_pred EEEeeeechhhhhhcceeeeeecccc
Q 007073 232 IIVGIVGGLIVLISGGLLFFLCKGRH 257 (619)
Q Consensus 232 ~i~~i~~~~~~~~~~~~~~~~~~~r~ 257 (619)
+++++++.++++++..++.+..++++
T Consensus 10 vl~avlal~vi~iisLIiLi~~w~qK 35 (39)
T 2l6w_A 10 VISAILALVVLTIISLIILIMLWQKK 35 (39)
Confidence 33344443333333333333334333
No 457
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=20.89 E-value=5.5e+02 Score=27.47 Aligned_cols=46 Identities=20% Similarity=0.117 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007073 394 WVTRKRVALGAA--RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 446 (619)
Q Consensus 394 ~~~~~~i~~~ia--~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 446 (619)
+..+..++..+| ..+.|+=.. +|=.++|||++.+|++.=+|||.+.
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 445555655544 355666543 5778999999999999999999874
Done!