Query 007074
Match_columns 619
No_of_seqs 331 out of 1495
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 16:29:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007074.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007074hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ljk_A Glucose-6-phosphate iso 100.0 5E-125 2E-129 1039.0 44.2 462 66-541 18-517 (543)
2 4em6_D Glucose-6-phosphate iso 100.0 6E-125 2E-129 1040.3 44.7 462 66-541 28-526 (553)
3 3hjb_A Glucose-6-phosphate iso 100.0 3E-124 1E-128 1036.1 41.9 460 67-540 50-547 (574)
4 3ujh_A Glucose-6-phosphate iso 100.0 1E-123 5E-128 1032.0 44.5 456 67-541 29-532 (567)
5 3qki_A Glucose-6-phosphate iso 100.0 4E-123 1E-127 1030.9 41.3 456 67-541 42-567 (597)
6 2cxn_A Glucose-6-phosphate iso 100.0 7E-119 2E-123 995.8 45.8 463 66-540 23-527 (557)
7 2wu8_A Glucose-6-phosphate iso 100.0 5E-118 2E-122 987.7 44.2 458 66-541 21-517 (549)
8 2o2c_A GPI, glucose-6-phosphat 100.0 6E-118 2E-122 994.1 44.9 463 66-540 68-579 (613)
9 1t10_A GPI, glucose-6-phosphat 100.0 6E-118 2E-122 992.9 41.5 463 66-540 68-577 (605)
10 3ff1_A Glucose-6-phosphate iso 100.0 4E-107 1E-111 882.6 39.1 405 95-539 6-430 (446)
11 1b0z_A Protein (phosphoglucose 100.0 6E-103 2E-107 852.2 42.2 408 95-541 2-429 (445)
12 2q8n_A Glucose-6-phosphate iso 100.0 1E-100 3E-105 837.2 43.5 409 90-541 9-443 (460)
13 1zzg_A Glucose-6-phosphate iso 100.0 1.8E-99 6E-104 818.5 42.6 401 96-540 2-414 (415)
14 3sho_A Transcriptional regulat 98.9 3.5E-08 1.2E-12 93.6 16.2 132 166-328 27-163 (187)
15 3fkj_A Putative phosphosugar i 98.8 4.1E-08 1.4E-12 103.7 13.4 157 164-348 23-191 (347)
16 3eua_A Putative fructose-amino 98.8 4.3E-08 1.5E-12 102.5 13.2 158 163-348 8-173 (329)
17 2aml_A SIS domain protein; 469 98.6 1.4E-07 4.7E-12 100.3 12.3 100 190-309 50-151 (373)
18 3hba_A Putative phosphosugar i 98.6 1.6E-07 5.3E-12 98.8 11.4 108 165-296 27-135 (334)
19 1wiw_A Glucose-6-phosphate iso 98.6 2.8E-07 9.6E-12 95.4 13.1 246 188-534 36-289 (290)
20 2yva_A DNAA initiator-associat 98.6 2.8E-07 9.7E-12 88.1 12.0 124 166-314 29-170 (196)
21 3fj1_A Putative phosphosugar i 98.6 1.4E-07 4.7E-12 99.4 10.1 113 166-308 29-143 (344)
22 2xhz_A KDSD, YRBH, arabinose 5 98.6 1.3E-07 4.4E-12 89.4 8.9 112 167-309 37-149 (183)
23 3c3j_A Putative tagatose-6-pho 98.6 2.3E-07 7.9E-12 98.9 11.8 108 191-308 54-162 (384)
24 3fxa_A SIS domain protein; str 98.5 2.6E-07 8.9E-12 89.0 10.0 113 166-309 32-145 (201)
25 2a3n_A Putative glucosamine-fr 98.5 2.9E-07 1E-11 97.1 10.8 118 164-310 38-156 (355)
26 3etn_A Putative phosphosugar i 98.5 3.2E-07 1.1E-11 90.5 9.6 94 190-296 59-153 (220)
27 3odp_A Putative tagatose-6-pho 98.5 9.4E-07 3.2E-11 94.9 13.3 162 166-347 44-211 (393)
28 2xbl_A Phosphoheptose isomeras 98.5 1.6E-06 5.5E-11 82.7 13.1 107 191-314 49-174 (198)
29 1tk9_A Phosphoheptose isomeras 98.4 1.7E-06 5.9E-11 81.9 11.2 103 191-310 43-164 (188)
30 3knz_A Putative sugar binding 98.3 1.8E-06 6E-11 91.9 11.6 95 188-297 48-143 (366)
31 3g68_A Putative phosphosugar i 98.3 1E-06 3.5E-11 93.1 9.5 95 188-296 32-127 (352)
32 3trj_A Phosphoheptose isomeras 98.3 2.2E-06 7.7E-11 83.4 11.1 110 191-314 47-175 (201)
33 1m3s_A Hypothetical protein YC 98.3 8.8E-07 3E-11 84.0 7.4 99 166-296 25-124 (186)
34 1jeo_A MJ1247, hypothetical pr 98.3 2.5E-06 8.5E-11 80.5 10.2 99 165-296 27-126 (180)
35 1tzb_A Glucose-6-phosphate iso 98.3 3.7E-06 1.3E-10 86.7 11.8 108 189-322 36-143 (302)
36 3i0z_A Putative tagatose-6-pho 98.3 7.5E-06 2.6E-10 87.8 13.9 101 190-298 56-158 (389)
37 1moq_A Glucosamine 6-phosphate 98.2 3.1E-06 1.1E-10 89.6 10.2 185 190-401 52-251 (368)
38 1vim_A Hypothetical protein AF 98.2 2.7E-06 9.1E-11 82.4 8.5 107 166-309 35-142 (200)
39 1x92_A APC5045, phosphoheptose 98.2 6.8E-06 2.3E-10 78.8 11.0 104 191-310 46-170 (199)
40 2i2w_A Phosphoheptose isomeras 98.2 1.1E-05 3.6E-10 78.7 11.4 101 191-309 65-184 (212)
41 2zj3_A Glucosamine--fructose-6 98.1 7.7E-06 2.6E-10 86.9 11.0 99 190-308 60-159 (375)
42 2poc_A D-fructose-6- PH, isome 98.1 6.2E-06 2.1E-10 87.4 10.0 99 190-308 50-149 (367)
43 1j5x_A Glucosamine-6-phosphate 98.1 1.2E-05 3.9E-10 84.5 10.9 94 189-297 51-146 (342)
44 3tbf_A Glucosamine--fructose-6 98.0 5.2E-06 1.8E-10 88.3 7.4 169 189-383 53-237 (372)
45 2e5f_A Hypothetical protein PH 97.9 2.6E-05 9E-10 81.1 9.4 90 189-297 30-121 (325)
46 2bpl_A Glucosamine--fructose-6 97.8 3.2E-05 1.1E-09 87.3 8.4 93 190-297 292-386 (608)
47 1nri_A Hypothetical protein HI 97.6 0.00098 3.3E-08 68.9 15.2 108 166-296 59-185 (306)
48 3cvj_A Putative phosphoheptose 97.4 0.00018 6.1E-09 71.4 6.6 45 244-296 108-164 (243)
49 3jx9_A Putative phosphoheptose 88.1 4.3 0.00015 38.5 11.5 104 192-323 40-151 (170)
50 2heo_A Z-DNA binding protein 1 79.6 2.2 7.4E-05 34.0 4.6 44 541-591 11-54 (67)
51 1qbj_A Protein (double-strande 74.6 11 0.00037 31.4 7.6 51 541-597 11-61 (81)
52 2gmg_A Hypothetical protein PF 73.4 2.8 9.5E-05 37.0 3.8 42 541-589 12-55 (105)
53 1xmk_A Double-stranded RNA-spe 70.6 7.8 0.00027 32.3 5.8 53 540-602 11-64 (79)
54 3ca8_A Protein YDCF; two domai 70.2 37 0.0013 34.1 12.0 115 163-288 12-153 (266)
55 1oyi_A Double-stranded RNA-bin 69.3 3.7 0.00013 34.6 3.6 54 539-603 16-69 (82)
56 2htj_A P fimbrial regulatory p 67.9 15 0.00052 29.5 7.1 41 542-590 2-42 (81)
57 1qgp_A Protein (double strande 67.5 6.3 0.00021 32.3 4.6 44 542-590 16-59 (77)
58 2lnb_A Z-DNA-binding protein 1 65.9 5.9 0.0002 33.2 4.0 42 541-589 20-61 (80)
59 4g65_A TRK system potassium up 63.1 14 0.00048 40.0 7.6 74 192-288 5-78 (461)
60 2a1j_A DNA repair endonuclease 62.8 6 0.00021 31.2 3.5 47 525-584 9-56 (63)
61 2fu4_A Ferric uptake regulatio 59.2 13 0.00043 29.9 5.0 45 540-590 17-66 (83)
62 3reo_A (ISO)eugenol O-methyltr 58.2 8.5 0.00029 39.9 4.7 46 543-590 44-91 (368)
63 2jt1_A PEFI protein; solution 57.6 24 0.00081 29.1 6.3 61 542-604 6-66 (77)
64 2r75_1 Cell division protein F 57.5 14 0.00048 38.6 6.2 39 192-233 9-47 (338)
65 2r3s_A Uncharacterized protein 56.9 16 0.00056 36.5 6.4 39 543-590 29-67 (335)
66 1z00_B DNA repair endonuclease 54.4 9.5 0.00033 32.0 3.5 47 525-584 23-70 (84)
67 3p9c_A Caffeic acid O-methyltr 53.9 12 0.00043 38.6 5.1 44 543-590 43-89 (364)
68 2vxz_A Pyrsv_GP04; viral prote 53.8 15 0.00051 34.5 4.9 49 534-591 5-53 (165)
69 3ezx_A MMCP 1, monomethylamine 53.4 52 0.0018 31.8 9.1 78 192-276 94-174 (215)
70 1qv9_A F420-dependent methylen 52.7 1E+02 0.0036 31.0 11.0 109 203-323 14-137 (283)
71 1xn7_A Hypothetical protein YH 51.9 25 0.00087 28.9 5.7 41 543-591 5-45 (78)
72 2vxy_A FTSZ, cell division pro 50.7 20 0.00069 38.1 6.1 40 191-233 12-51 (382)
73 2cfx_A HTH-type transcriptiona 50.7 28 0.00097 30.9 6.3 42 541-590 6-47 (144)
74 3r0a_A Putative transcriptiona 50.7 17 0.00058 31.8 4.7 44 540-590 26-70 (123)
75 3lou_A Formyltetrahydrofolate 50.6 33 0.0011 35.1 7.5 57 245-310 96-152 (292)
76 4a6d_A Hydroxyindole O-methylt 49.9 13 0.00045 38.3 4.5 41 543-590 31-71 (353)
77 1y80_A Predicted cobalamin bin 48.6 79 0.0027 29.9 9.5 76 192-276 90-168 (210)
78 3n0v_A Formyltetrahydrofolate 48.5 27 0.00093 35.6 6.5 56 245-309 91-146 (286)
79 3i53_A O-methyltransferase; CO 47.9 13 0.00045 37.4 4.0 43 543-596 28-70 (332)
80 1zg3_A Isoflavanone 4'-O-methy 47.8 13 0.00043 38.1 3.9 44 542-590 32-76 (358)
81 2ia0_A Putative HTH-type trans 47.7 33 0.0011 31.7 6.5 52 540-599 17-70 (171)
82 3dhn_A NAD-dependent epimerase 47.0 83 0.0028 29.0 9.3 88 191-287 5-112 (227)
83 4hv4_A UDP-N-acetylmuramate--L 46.4 87 0.003 33.9 10.5 37 188-228 20-56 (494)
84 2cg4_A Regulatory protein ASNC 45.9 34 0.0011 30.6 6.1 42 541-590 9-50 (152)
85 2w25_A Probable transcriptiona 45.9 36 0.0012 30.3 6.2 42 541-590 8-49 (150)
86 2ip2_A Probable phenazine-spec 45.3 16 0.00056 36.6 4.3 39 543-590 31-69 (334)
87 3dp7_A SAM-dependent methyltra 45.3 15 0.00051 37.9 4.0 42 542-590 37-78 (363)
88 2p5v_A Transcriptional regulat 45.2 36 0.0012 30.8 6.2 42 541-590 11-52 (162)
89 2e5f_A Hypothetical protein PH 44.8 31 0.0011 35.2 6.3 114 167-318 177-292 (325)
90 2dbb_A Putative HTH-type trans 44.3 36 0.0012 30.3 6.0 43 540-590 9-51 (151)
91 3i4p_A Transcriptional regulat 43.7 35 0.0012 31.1 5.9 50 541-598 4-55 (162)
92 1qzz_A RDMB, aclacinomycin-10- 43.6 18 0.00061 37.0 4.3 44 542-596 38-81 (374)
93 3e48_A Putative nucleoside-dip 43.5 74 0.0025 30.7 8.6 86 193-287 3-106 (289)
94 1fp2_A Isoflavone O-methyltran 43.0 16 0.00055 37.3 3.8 44 542-590 38-82 (352)
95 1sfx_A Conserved hypothetical 42.9 35 0.0012 27.7 5.3 41 542-590 22-62 (109)
96 1t6s_A Conserved hypothetical 42.7 59 0.002 30.5 7.3 53 539-596 6-62 (162)
97 2k02_A Ferrous iron transport 41.4 31 0.0011 29.1 4.7 45 543-595 5-49 (87)
98 2p5k_A Arginine repressor; DNA 41.3 45 0.0016 25.0 5.3 36 543-586 8-48 (64)
99 1x19_A CRTF-related protein; m 39.9 21 0.00071 36.5 4.1 40 542-590 53-92 (359)
100 2vaw_A FTSZ, cell division pro 39.4 39 0.0014 36.1 6.2 39 191-232 12-50 (394)
101 2o03_A Probable zinc uptake re 39.3 33 0.0011 30.3 4.8 46 540-590 11-59 (131)
102 2cyy_A Putative HTH-type trans 39.1 36 0.0012 30.5 5.1 42 541-590 8-49 (151)
103 2y75_A HTH-type transcriptiona 39.1 41 0.0014 29.3 5.3 42 544-590 13-54 (129)
104 3lst_A CALO1 methyltransferase 39.1 12 0.0004 38.3 2.0 42 544-596 46-87 (348)
105 1rq2_A Cell division protein F 39.0 41 0.0014 35.8 6.2 40 191-233 12-51 (382)
106 2bpl_A Glucosamine--fructose-6 38.7 1.8E+02 0.0061 32.3 11.7 119 167-318 453-574 (608)
107 3nrb_A Formyltetrahydrofolate 38.6 27 0.00092 35.6 4.6 56 245-309 89-145 (287)
108 3obi_A Formyltetrahydrofolate 38.1 23 0.0008 36.1 4.1 56 245-309 90-146 (288)
109 1tw3_A COMT, carminomycin 4-O- 36.6 25 0.00086 35.7 4.0 40 542-590 41-80 (360)
110 4g65_A TRK system potassium up 36.6 1.5E+02 0.0052 31.8 10.4 96 188-306 233-331 (461)
111 2pn6_A ST1022, 150AA long hypo 36.5 46 0.0016 29.5 5.4 42 541-590 4-45 (150)
112 1ofu_A FTSZ, cell division pro 36.4 41 0.0014 34.7 5.6 39 191-232 12-50 (320)
113 2e1c_A Putative HTH-type trans 36.4 24 0.00082 32.8 3.5 43 540-590 27-69 (171)
114 1tc3_C Protein (TC3 transposas 36.0 59 0.002 22.2 4.9 26 560-587 21-46 (51)
115 2yxb_A Coenzyme B12-dependent 35.5 2.1E+02 0.0073 26.0 9.9 76 192-276 20-98 (161)
116 4dxd_A Cell division protein F 35.1 42 0.0014 35.9 5.5 99 191-301 18-132 (396)
117 3o1l_A Formyltetrahydrofolate 35.1 38 0.0013 34.8 5.0 56 245-309 106-161 (302)
118 3k2z_A LEXA repressor; winged 35.1 47 0.0016 31.2 5.4 46 541-589 6-51 (196)
119 1w5f_A Cell division protein F 34.9 44 0.0015 35.1 5.6 40 191-233 22-61 (353)
120 3c57_A Two component transcrip 34.7 24 0.00082 29.4 2.9 63 521-591 8-75 (95)
121 2fe3_A Peroxide operon regulat 34.2 59 0.002 29.2 5.7 45 541-590 23-70 (145)
122 1fp1_D Isoliquiritigenin 2'-O- 33.9 29 0.001 35.6 4.1 47 542-590 46-96 (372)
123 2vap_A FTSZ, cell division pro 33.9 39 0.0013 35.7 5.0 38 192-232 39-76 (364)
124 1ccw_A Protein (glutamate muta 33.4 2E+02 0.0069 25.4 9.1 76 192-276 5-83 (137)
125 3cuo_A Uncharacterized HTH-typ 33.2 48 0.0016 26.7 4.6 41 541-589 25-65 (99)
126 2aml_A SIS domain protein; 469 32.9 2.5E+02 0.0086 28.9 11.1 115 167-318 213-330 (373)
127 3sft_A CHEB, chemotaxis respon 32.8 21 0.00072 34.5 2.5 63 195-259 9-73 (193)
128 2zj3_A Glucosamine--fructose-6 32.5 1.4E+02 0.0048 30.9 9.1 110 190-318 231-341 (375)
129 1y0u_A Arsenical resistance op 32.3 67 0.0023 26.3 5.3 43 542-596 33-75 (96)
130 2dkn_A 3-alpha-hydroxysteroid 32.3 1.9E+02 0.0067 26.8 9.4 59 192-255 3-74 (255)
131 3gva_A Alkyltransferase-like p 32.1 60 0.0021 28.9 5.2 43 540-585 5-47 (116)
132 3r6d_A NAD-dependent epimerase 31.7 2.7E+02 0.0091 25.5 10.1 82 191-287 6-108 (221)
133 3mcz_A O-methyltransferase; ad 31.2 29 0.00099 35.1 3.4 37 544-590 48-84 (352)
134 1i1g_A Transcriptional regulat 30.6 56 0.0019 28.4 4.9 42 541-590 5-46 (141)
135 4b8w_A GDP-L-fucose synthase; 30.6 2.9E+02 0.01 26.2 10.6 61 191-255 7-73 (319)
136 2z99_A Putative uncharacterize 30.5 87 0.003 30.8 6.5 49 541-596 16-68 (219)
137 1hdo_A Biliverdin IX beta redu 30.1 1.4E+02 0.0047 26.7 7.6 87 191-287 4-111 (206)
138 3qvo_A NMRA family protein; st 30.0 2E+02 0.0068 26.9 9.0 85 190-287 23-125 (236)
139 3sc6_A DTDP-4-dehydrorhamnose 28.7 3E+02 0.01 26.2 10.2 57 192-255 7-68 (287)
140 2xig_A Ferric uptake regulatio 28.5 81 0.0028 28.5 5.6 46 540-590 27-75 (150)
141 4egb_A DTDP-glucose 4,6-dehydr 28.5 2.3E+02 0.0078 27.9 9.5 61 191-255 25-110 (346)
142 3nzo_A UDP-N-acetylglucosamine 28.5 1.5E+02 0.005 30.8 8.4 61 191-255 36-124 (399)
143 1j5y_A Transcriptional regulat 28.1 1.1E+02 0.0038 28.4 6.7 44 539-589 20-63 (187)
144 1ub9_A Hypothetical protein PH 27.8 1.3E+02 0.0043 24.1 6.2 58 542-609 18-76 (100)
145 2jpc_A SSRB; DNA binding prote 27.8 79 0.0027 23.3 4.6 39 542-590 3-45 (61)
146 3gwz_A MMCR; methyltransferase 27.6 39 0.0013 34.8 3.7 42 544-596 62-103 (369)
147 2kif_A O6-methylguanine-DNA me 27.5 68 0.0023 28.1 4.7 43 540-585 3-45 (108)
148 1yo6_A Putative carbonyl reduc 27.5 3.4E+02 0.012 24.9 10.2 22 192-214 5-26 (250)
149 1xrs_B D-lysine 5,6-aminomutas 26.9 4.9E+02 0.017 26.0 12.1 102 192-301 122-235 (262)
150 1p6r_A Penicillinase repressor 26.6 44 0.0015 26.6 3.1 44 541-590 10-55 (82)
151 1fse_A GERE; helix-turn-helix 26.0 97 0.0033 23.5 5.0 35 541-585 15-49 (74)
152 2pzm_A Putative nucleotide sug 25.9 4.4E+02 0.015 25.8 11.1 62 191-256 21-101 (330)
153 3lk7_A UDP-N-acetylmuramoylala 25.7 1.3E+02 0.0045 31.9 7.5 31 191-226 10-40 (451)
154 1chd_A CHEB methylesterase; ch 25.5 59 0.002 31.6 4.3 64 195-260 12-76 (203)
155 2oqg_A Possible transcriptiona 25.2 1.1E+02 0.0037 25.3 5.6 40 542-590 23-62 (114)
156 4ets_A Ferric uptake regulatio 24.7 77 0.0026 29.2 4.8 44 542-590 35-83 (162)
157 1vl0_A DTDP-4-dehydrorhamnose 24.6 3.6E+02 0.012 25.7 9.9 59 190-255 12-75 (292)
158 3g68_A Putative phosphosugar i 24.4 5.8E+02 0.02 26.0 12.5 115 167-317 197-311 (352)
159 3dqp_A Oxidoreductase YLBE; al 24.4 2.7E+02 0.0093 25.4 8.7 58 192-255 2-75 (219)
160 1x3u_A Transcriptional regulat 24.0 1.8E+02 0.0061 22.4 6.3 37 538-584 17-53 (79)
161 1mkm_A ICLR transcriptional re 23.8 1.1E+02 0.0038 29.7 6.0 45 543-596 11-55 (249)
162 3t8r_A Staphylococcus aureus C 23.4 1.1E+02 0.0038 27.4 5.5 42 544-590 15-56 (143)
163 2xvc_A ESCRT-III, SSO0910; cel 23.4 90 0.0031 24.7 4.1 40 543-589 13-52 (59)
164 3lwf_A LIN1550 protein, putati 22.8 1.5E+02 0.0052 27.2 6.4 42 544-590 31-72 (159)
165 3mwm_A ZUR, putative metal upt 22.6 93 0.0032 27.7 4.8 46 540-590 14-62 (139)
166 3p9x_A Phosphoribosylglycinami 22.4 63 0.0021 31.5 3.8 55 246-309 4-60 (211)
167 1je8_A Nitrate/nitrite respons 22.3 1.2E+02 0.004 24.3 5.0 40 540-589 24-67 (82)
168 1bia_A BIRA bifunctional prote 21.7 93 0.0032 31.7 5.1 41 541-589 6-46 (321)
169 1e6u_A GDP-fucose synthetase; 21.6 4.6E+02 0.016 25.2 10.1 58 191-255 4-67 (321)
170 2kko_A Possible transcriptiona 21.6 1.7E+02 0.0058 24.5 6.1 40 542-590 27-66 (108)
171 3ing_A Homoserine dehydrogenas 21.5 75 0.0026 32.8 4.4 87 247-343 85-198 (325)
172 3tbf_A Glucosamine--fructose-6 21.2 99 0.0034 32.2 5.3 110 189-317 226-337 (372)
173 3k69_A Putative transcription 20.9 1.2E+02 0.0043 27.8 5.4 41 544-590 16-56 (162)
174 2d1h_A ST1889, 109AA long hypo 20.8 1.1E+02 0.0038 24.6 4.6 30 559-590 35-64 (109)
175 4ina_A Saccharopine dehydrogen 20.7 5.2E+02 0.018 26.8 10.9 19 192-212 3-21 (405)
176 3bdd_A Regulatory protein MARR 20.6 2.6E+02 0.0088 23.5 7.2 58 542-608 33-90 (142)
177 3hba_A Putative phosphosugar i 20.5 2.1E+02 0.0073 29.2 7.7 112 162-288 176-289 (334)
178 2q1w_A Putative nucleotide sug 20.5 4.5E+02 0.016 25.7 10.0 62 191-256 22-102 (333)
179 2xrn_A HTH-type transcriptiona 20.5 86 0.0029 30.4 4.4 44 544-596 10-53 (241)
180 4id9_A Short-chain dehydrogena 20.4 3.1E+02 0.011 26.9 8.7 88 191-287 20-126 (347)
181 3rkx_A Biotin-[acetyl-COA-carb 20.3 1.7E+02 0.0059 29.9 6.9 52 541-598 4-63 (323)
No 1
>3ljk_A Glucose-6-phosphate isomerase; structural genomics, IDP02733, cytoplasm, gluconeogenesis, glycolysis; HET: MSE MES; 1.48A {Francisella tularensis} PDB: 3m5p_A* 3q7i_A* 3q88_A*
Probab=100.00 E-value=5.2e-125 Score=1039.00 Aligned_cols=462 Identities=30% Similarity=0.439 Sum_probs=415.4
Q ss_pred chhHHHHhhcCchhhHHHHHHHHhhccCcceEEEccCCCCCHHHHHHhHHHHHHH--HHHHHHHHhcCCCCCCccccccc
Q 007074 66 PKKAKNGLEKDPRELWKRYVDWLYQHKELGLYLDVSRVGFTDEFVEEMEPRFQAA--FKAMEELEKGAIANPDEGRMVGH 143 (619)
Q Consensus 66 ~~~l~~~f~~~~~~~~~r~~~~~~~~~~~gl~lD~Sr~~i~~~~l~~l~~~~~~a--~~~~~~l~~G~~~N~~E~R~v~H 143 (619)
..+|+++|+.|+. |+++|++. ..||++|||||++++++++.|.+.++++ .++|++||+|+++|.||+|+|+|
T Consensus 18 ~~~l~~lf~~d~~----R~~~~~~~--~~~l~~D~Sk~~~~~~~~~~l~~la~~~~~~~~~~~mf~G~~iN~tE~R~vlH 91 (543)
T 3ljk_A 18 NINLKNEFDKDDK----RVEKFSLK--HQNIYFDYSKNLINDYILKSLLESAEKSSLKDKIKQMFNGAKINSTEHRAVLH 91 (543)
T ss_dssp CCCHHHHHHHCTT----HHHHTEEE--ETTEEEECTTSSCCHHHHHHHHHHHHHSSHHHHHHHHHHTCCCBTTTTBCCCG
T ss_pred CCCHHHHhhhChh----HHHhhcee--eCCEEEEecCCcCCHHHHHHHHHHHHhCChHHHHHHHhCCCCcCCCCCcceee
Confidence 4569999999999 89998554 6699999999999999999999988776 78999999999999999999999
Q ss_pred ccccCCCCCCc----hhhhHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCC-CC
Q 007074 144 YWLRKPELAPN----SFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDN-PP 218 (619)
Q Consensus 144 ~wLr~p~~~~~----~~~~~~i~~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~-~~ 218 (619)
+|||.|...|. .++.++|++++++|++|+++||+|+|+|++| ++|++||+||||||+|||+|+++||+++. .+
T Consensus 92 ~aLR~~~~~~~~~~g~~v~~~v~~~l~~m~~fa~~vrsg~~~g~tg--~~i~~VV~IGIGGS~LGp~~v~eaL~~~~~~~ 169 (543)
T 3ljk_A 92 TALRDLSSTPLIVDGQDIRQEVTKEKQRVKELVEKVVSGRWRGFSG--KKITDIVNIGIGGSDLGPKMVVRALQPYHCTD 169 (543)
T ss_dssp GGGGCCSCCCCEETTEEHHHHHHHHHHHHHHHHHHHHTTCSBCTTS--CBCCEEEEECCGGGTHHHHHHHHHTGGGCCSS
T ss_pred hhhcCCCCCCcccCchhhHHHHHHHHHHHHHHHHHHHcCCcccCCC--CceeeEEEEecccchHHHHHHHHHhhhhccCC
Confidence 99999988763 4778999999999999999999999999999 99999999999999999999999999864 45
Q ss_pred ceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccc---cCCEEEEEecCCchhhhh
Q 007074 219 LKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREAGLE---FAKQGVAITQENSLLDNT 295 (619)
Q Consensus 219 ~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~---~~~h~VaVT~~~s~L~~~ 295 (619)
+++||++|+||+++.++++.|+|+ +||||||||||||+||+.|++.+++||++++.+ +++||||||++.+ .
T Consensus 170 ~~~~Fv~NvDp~~l~~~L~~l~~~--~TLfiViSKSgtT~ET~~n~~~ar~wl~~~~g~~~~~~khfvAvTt~~~----~ 243 (543)
T 3ljk_A 170 LKVHFVSNVDADSLLQALHVVDPE--TTLLIIASKSFSTEETLLNSISAREWLLDHYEDEKAVANHFVAISSKLD----K 243 (543)
T ss_dssp CEEEEECCSSHHHHHHHHTTCCGG--GEEEEEECTTSCCHHHHHHHHHHHHHHHHHHCCGGGGGGTEEEECSCHH----H
T ss_pred CeEEEEeCCCHHHHHHHHhhCCcc--cEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcccccCeEEEEcCChH----H
Confidence 899999999999999999999985 999999999999999999999999999886432 6899999999643 3
Q ss_pred HHHhCCc--ceeeccCCCCCcchhhhHhhHHHHHhcCCC-HHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHHHHHhcCCC
Q 007074 296 VRIEGWL--ARFPMFDWVGGRTSEMSAVGLLPAALQGID-VREMLAGASLMDEANRTTVLRNNPAALLALCWYWASDGVG 372 (619)
Q Consensus 296 A~~~g~~--~~F~~pd~VGGRfSvlSaVGLlPaal~GiD-i~~lL~GA~~md~~~~~~~l~~N~a~llAl~~~~~~~~~g 372 (619)
+++.||. ++|+||||||||||+||+|||+|++++|+| |++||+||++||+||+++|+++|||++||++++|+.+++|
T Consensus 244 a~~~Gi~~~~~F~~~d~VGGRySv~SaVGL~~a~~~G~d~~~~lL~GA~~md~~f~~~~l~~N~p~llAl~~~~~~~~~G 323 (543)
T 3ljk_A 244 VKEFGIDLEHCYKMWDWVGGRYSLWSSIGMSIAFAIGYDNFEKLLAGAYSVDKHFKETEFSKNIPVIMALLASYYSCTYN 323 (543)
T ss_dssp HHHHTCCGGGEECCCTTSCGGGCTTSGGGHHHHHHHCHHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHTC
T ss_pred HHHcCCCccCEEECCCCCCCcCcCcchhHHHHHHHcCcHHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhcCC
Confidence 5667883 489999999999999999998888888998 9999999999999999999999999999999999999999
Q ss_pred CceEEEEechhchHhHHHHHHHHHHhhcCccccCCCCccc--ccceEeecCCCCChhhHHHhhhccCCceeeEEEeeccC
Q 007074 373 SKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVN--QGLTVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRD 450 (619)
Q Consensus 373 ~~~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~dG~~v~--~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~~tFI~v~~~ 450 (619)
+++++++||+++|++|++|||||+|||+||++++||++|. +|+++||+.||||||||+||||||++++|+|||.+.++
T Consensus 324 ~~~~~llpY~~~L~~f~~w~qQL~mES~GK~v~~~G~~v~~~tgpivwG~~Gt~dQHSf~QlihqG~~~~~~tFI~~~~~ 403 (543)
T 3ljk_A 324 SQSQALLPYDERLCYFVDYLQQADMESNGKSVNIAGETVNYQTGVVLWGGVGTNGQHAFHQLLHQGNIFIPVDFIAIATS 403 (543)
T ss_dssp CCEEEEEECSGGGTTHHHHHHHHHHHHHCCSBCTTSCBCSSCCCCEEEECCTTGGGGTTHHHHHHSSCCCCEEEEEESSC
T ss_pred CCeEEEEEChHHHHHHHHHHHHHHHhccCCccCcCCCccccCccceeecCCCCCcHHHHHHHHhcCCCCceEEEEEeCCC
Confidence 9999999999999999999999999999999999999986 99999999999999999999999999999999999875
Q ss_pred CCC---CCccc----------cCCCCChHHHHHHh-hcc-------c--hhhcccCCcceeEEEeccCChhhHHHHHHHH
Q 007074 451 RPP---GHDWE----------LEPGVTCGDYLFGM-LQG-------T--RSALYANDRESVTVTVQEVTPRSVGALVALY 507 (619)
Q Consensus 451 ~~~---~~~~~----------l~~g~t~~d~L~~~-~~g-------t--~~al~~ggrPs~tI~l~~l~~~~LGaLialy 507 (619)
..+ +|+.+ +..|++.++....+ .+| + .++.++|||||++|+++++||++||+|||||
T Consensus 404 ~~~~~~~~~~l~~N~laQ~~al~~Gkt~~ev~~e~~~~g~~~~~~~~l~~h~~~~gnrPs~~I~l~~ltp~~lG~Lialy 483 (543)
T 3ljk_A 404 HHNYDNHQQALLANCFAQSQALMFGQSYDMVYNELLKSGLNETQAKELAAHKVIPGNRPSTTILLDELSPYSLGALIALY 483 (543)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHTTCCHHHHHHHHHHHCBCCCCCEEEEEESCCCHHHHHHHHHHH
T ss_pred CCCchhhhhhHhhhHHHHHHHHHcCCCHHHHHHHHHhccCchhhHHHhhhhhhcCCCCceEEEEecCCChHHHHHHHHHH
Confidence 432 11211 12466666544321 122 1 2445889999999999999999999999999
Q ss_pred HHHHHHHHHhhCcCCCCCCchHHHHHHHHHHHHH
Q 007074 508 ERAVGIYASLVNINAYHQPGVEAGKKAAGEVLAL 541 (619)
Q Consensus 508 E~av~~~g~L~gINpFDQPGVE~gK~~a~~il~~ 541 (619)
||+|+++|+|||||||||||||+||++|++|+..
T Consensus 484 Eh~v~v~G~l~gIN~FDQpGVElGK~la~~il~~ 517 (543)
T 3ljk_A 484 EHKIFVQGVLWDINSYDQWGVELGKKLGKNILKA 517 (543)
T ss_dssp HHHHHHHHHHHTCCTTCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCcCCCCChhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888764
No 2
>4em6_D Glucose-6-phosphate isomerase; GPI, phosphoglucose isomerase phosphohexose isomerase, PHI, ssgcid; 1.90A {Brucella melitensis BV}
Probab=100.00 E-value=6.1e-125 Score=1040.29 Aligned_cols=462 Identities=32% Similarity=0.448 Sum_probs=416.0
Q ss_pred chhHHHHhhcCchhhHHHHHHHHhhccCcceEEEccCCCCCHHHHHHhHHHHHHH--HHHHHHHHhcCCCCCCccccccc
Q 007074 66 PKKAKNGLEKDPRELWKRYVDWLYQHKELGLYLDVSRVGFTDEFVEEMEPRFQAA--FKAMEELEKGAIANPDEGRMVGH 143 (619)
Q Consensus 66 ~~~l~~~f~~~~~~~~~r~~~~~~~~~~~gl~lD~Sr~~i~~~~l~~l~~~~~~a--~~~~~~l~~G~~~N~~E~R~v~H 143 (619)
..+|+++|+.|+. |+++|++. ..||++|||||++++++++.|.+.++++ .++|++||+|+++|.||+|+|+|
T Consensus 28 ~~~l~~lf~~d~~----R~~~~~~~--~~~~~~D~Sk~~~~~~~~~~l~~la~~~~~~~~~~~mf~G~~iN~tE~R~vlH 101 (553)
T 4em6_D 28 PRDMRAAFSADPG----RFGRYSLC--LDDLLFDWSKCRVNDETMALLKELAVAADVEGRRAAMFAGEHINNTEDRAVLH 101 (553)
T ss_dssp CSCHHHHHHHCTT----HHHHTEEE--ETTEEEECTTSSCCHHHHHHHHHHHHHTTHHHHHHHHHTTCCCBTTTTBCCCG
T ss_pred cCCHHHHhhcCcc----hhhhheee--cCCEEEEccCCcCCHHHHHHHHHHHHhCChHHHHHHHhCCCCcCCCCCchhhh
Confidence 3569999999999 89998554 6699999999999999999999988776 78999999999999999999999
Q ss_pred ccccCCCCCCc----hhhhHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCc
Q 007074 144 YWLRKPELAPN----SFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPL 219 (619)
Q Consensus 144 ~wLr~p~~~~~----~~~~~~i~~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~ 219 (619)
+|||.|...|. .++.++|++++++|++|+++||+|+|+|++| ++|++||+||||||+|||+|+++||+++..++
T Consensus 102 ~aLR~~~~~~~~v~g~~v~~~v~~~l~~i~~fa~~vrsg~~~g~tg--~~i~~vV~IGIGGS~LGp~~v~eAL~~~~~~~ 179 (553)
T 4em6_D 102 VALRDTSSKEVLVDGHNVLPDVKHVLDRMAAFADGIRSGALKGATG--RKITDIVNIGIGGSDLGPVMATLALAPYHDEP 179 (553)
T ss_dssp GGGGCCSCSCCEETTEECHHHHHHHHHHHHHHHHHHHHTSSBCTTS--CBCCEEEEECCGGGTHHHHHHHHHTGGGCCSS
T ss_pred HHhcCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHcCCcccCCC--CceeeEEEEecccccHHHHHHHHHHhccCCCC
Confidence 99999988764 4788999999999999999999999999999 99999999999999999999999999876668
Q ss_pred eEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhcc--ccCCEEEEEecCCchhhhhHH
Q 007074 220 KIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREAGL--EFAKQGVAITQENSLLDNTVR 297 (619)
Q Consensus 220 ~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~--~~~~h~VaVT~~~s~L~~~A~ 297 (619)
++||++|+||+++.++++.|+|+ +||||||||||||+||+.|++.+++||++++. .+++||||||++.+ .++
T Consensus 180 ~~~Fv~NvDp~~l~~~L~~l~~~--~TLfiViSKSgtT~ET~~n~~~ar~wl~~~~~~~~~~kh~vAvTt~~~----~a~ 253 (553)
T 4em6_D 180 RAHFVSNIDGAHIADTLSPLDPA--STLIIVASKTFTTIETMTNAQTARKWVADTLGEAAVGAHFAAVSTALD----KVA 253 (553)
T ss_dssp EEEEECCSSHHHHHHHHTTSCGG--GEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCGGGGGGTEEEECSCHH----HHH
T ss_pred eEEEEeCCCHHHHHHHHhhCCcC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCcccccCeEEEEcCCcH----HHH
Confidence 99999999999999999999985 99999999999999999999999999987642 36899999999643 356
Q ss_pred HhCCc--ceeeccCCCCCcchhhhHhhHHHHHhcCCC-HHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHHHHHhcCCCCc
Q 007074 298 IEGWL--ARFPMFDWVGGRTSEMSAVGLLPAALQGID-VREMLAGASLMDEANRTTVLRNNPAALLALCWYWASDGVGSK 374 (619)
Q Consensus 298 ~~g~~--~~F~~pd~VGGRfSvlSaVGLlPaal~GiD-i~~lL~GA~~md~~~~~~~l~~N~a~llAl~~~~~~~~~g~~ 374 (619)
+.||. ++|+||||||||||+||+|||+|++++|+| |++||+||++||+||+++|+++|||++||++++|+.+++|++
T Consensus 254 ~~Gi~~~~~F~~~d~VGGRySv~SaVGL~~a~~~G~d~~~~lL~GA~~md~~f~~~~l~~N~p~llAl~~~~~~~~~G~~ 333 (553)
T 4em6_D 254 AFGIPEDRVFGFWDWVGGRYSVWSAIGLPVMIAVGPDNFRKFLAGAHAMDVHFRDAPLEKNLPVMLGLIGYWHRAICGYG 333 (553)
T ss_dssp HHTCCGGGEECCCTTSCGGGCTTSGGGHHHHHHHCHHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTSCCC
T ss_pred HcCCccccEEecCCCcCccccccchhhHHHHHHcCcHHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhcCCCC
Confidence 67873 489999999999999999998888888998 999999999999999999999999999999999999999999
Q ss_pred eEEEEechhchHhHHHHHHHHHHhhcCccccCCCCccc--ccceEeecCCCCChhhHHHhhhccCCceeeEEEeeccCCC
Q 007074 375 DMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVN--QGLTVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRP 452 (619)
Q Consensus 375 ~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~dG~~v~--~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~~tFI~v~~~~~ 452 (619)
+++++||+++|++|++|||||+|||+||++++||++|. +|+++||+.||||||||+||||||++++|+|||.+.++..
T Consensus 334 ~~~llpY~~~L~~f~~w~qQL~mES~GK~v~~~G~~v~~~tgpivwG~~Gt~dQHSf~QlihqG~~~~~~tFI~~~~~~~ 413 (553)
T 4em6_D 334 SRAIIPYDQRLSRLPAYLQQLDMESNGKSVTLDGKPVSGPTGPVVWGEPGTNGQHAFFQLLHQGTDTIPLEFIVAAKGHE 413 (553)
T ss_dssp EEEEEEECGGGTTHHHHHHHHHHHHHCCSBCTTSCBCSSCCCCEEECCCTTGGGGTTHHHHHHSSSCCCEEEEEESSCSC
T ss_pred eEEEEEChHHHHHHHHHHHHHHHhccCCccCCCCCccccCCcceecCCCCCCcHHHHHHHHhcCCCCceEEEEEECCCCC
Confidence 99999999999999999999999999999999999986 9999999999999999999999999999999999987543
Q ss_pred C----CCccc----------cCCCCChHHHHHHh-hcc-------c--hhhcccCCcceeEEEeccCChhhHHHHHHHHH
Q 007074 453 P----GHDWE----------LEPGVTCGDYLFGM-LQG-------T--RSALYANDRESVTVTVQEVTPRSVGALVALYE 508 (619)
Q Consensus 453 ~----~~~~~----------l~~g~t~~d~L~~~-~~g-------t--~~al~~ggrPs~tI~l~~l~~~~LGaLialyE 508 (619)
+ +|+.+ +..|++.++..... .+| + .++.++|||||++|+++++||++||+||||||
T Consensus 414 ~~~~~~~~~l~~N~laQ~~al~~Gkt~~e~~~e~~~~g~~~~~~~~l~~h~~~~gnrPs~~I~l~~l~p~~lG~LialyE 493 (553)
T 4em6_D 414 PTLDHQHEMLMANCLAQSEALMKGRTLDEARAQLQAKNLPASQVERIAPHRVFSGNRPSLTLIHDMLDPYTLGRLIALYE 493 (553)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHTTCCHHHHHHHGGGGCBCCCCCEEEEEESCCCHHHHHHHHHHHH
T ss_pred CccchhhhHHhhhHHHHHHHHHcCCCHHHHHHHHHhcCCchhhHHhhhhhhhcCCCCceEEEEeCCCChHHHHHHHHHHH
Confidence 3 11121 11466665543321 122 1 24458899999999999999999999999999
Q ss_pred HHHHHHHHhhCcCCCCCCchHHHHHHHHHHHHH
Q 007074 509 RAVGIYASLVNINAYHQPGVEAGKKAAGEVLAL 541 (619)
Q Consensus 509 ~av~~~g~L~gINpFDQPGVE~gK~~a~~il~~ 541 (619)
|+|+++|+|||||||||||||+||++|++|+..
T Consensus 494 h~v~v~G~l~gIN~FDQpGVElGK~la~~il~~ 526 (553)
T 4em6_D 494 HRVFVEAQIFGINAFDQWGVELGKELATELLPV 526 (553)
T ss_dssp HHHHHHHHHHTCCTTCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcCcCCCCChhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999877763
No 3
>3hjb_A Glucose-6-phosphate isomerase; PGI, IDP01329, gluconeogenesi glycolysis, structural genomics, center for STRU genomics of infectious diseases; HET: PG4; 1.50A {Vibrio cholerae} PDB: 3nbu_A
Probab=100.00 E-value=3e-124 Score=1036.08 Aligned_cols=460 Identities=29% Similarity=0.421 Sum_probs=414.2
Q ss_pred hhHHHHhhcCchhhHHHHHHHHhhccCcc-eEEEccCCCCCHHHHHHhHHHHHH--HHHHHHHHHhcCCCCCCccccccc
Q 007074 67 KKAKNGLEKDPRELWKRYVDWLYQHKELG-LYLDVSRVGFTDEFVEEMEPRFQA--AFKAMEELEKGAIANPDEGRMVGH 143 (619)
Q Consensus 67 ~~l~~~f~~~~~~~~~r~~~~~~~~~~~g-l~lD~Sr~~i~~~~l~~l~~~~~~--a~~~~~~l~~G~~~N~~E~R~v~H 143 (619)
.+|+++|+.|+. |+.++ +.+..| |++|||||++++++++.|.+..++ ..++|++||+|+++|.||+|+|+|
T Consensus 50 ~~l~~lf~~d~~----R~~~~--s~~~~~~l~~D~Sk~~i~~~~~~~l~~la~~~~~~~~~~~mf~G~~iN~tE~R~vlH 123 (574)
T 3hjb_A 50 MDLKALFAQDSE----RFAKY--SARFGQDILVDYSKNLVNAETMQHLFALAKETDLQSAITAMFKGEAINQTEDRAVLH 123 (574)
T ss_dssp CCHHHHHHTCTT----HHHHT--EEEETTTEEEECCSSSCCHHHHHHHHHHHHHTTHHHHHHHHHHTCCCBTTTTBCCCH
T ss_pred CCHHHHhccCCC----ccccc--eEEECCeEEEeccCCcCCHHHHHHHHHHHHhCChHHHHHHHhCCCCCCCCCCcceee
Confidence 458999999999 89987 445678 999999999999999999987654 468899999999999999999999
Q ss_pred ccccCCCCCCc----hhhhHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCc
Q 007074 144 YWLRKPELAPN----SFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPL 219 (619)
Q Consensus 144 ~wLr~p~~~~~----~~~~~~i~~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~ 219 (619)
+|||.|...|. .++.++|++++++|++|+++||+|+|+|+|| ++|++||+||||||+|||+|+++||+++..++
T Consensus 124 ~aLR~~~~~~~~vdg~~v~~~v~~~l~~i~~fa~~vrsg~~~g~tg--~~i~~VV~IGIGGS~LGp~~v~eAL~~~~~~~ 201 (574)
T 3hjb_A 124 TALRNRSNSPVLVNGEDVMPAVNAVLAKMKAFSERVIGGEWKGFTG--KAITDVVNIGIGGSDLGPYMVTEALVPYKNHL 201 (574)
T ss_dssp HHHTCTTCCCCEETTEESHHHHHHHHHHHHHHHHHHHHTCSBCTTS--CBCCEEEEECCGGGTHHHHHHHHHTGGGCCSC
T ss_pred HHhhCCCCCCcccCchhhhHHHHHHHHHHHHHHHHHHcCCcccCCC--CCCCeEEEEecccchHHHHHHHHHhhcccCCC
Confidence 99999988763 4678999999999999999999999999999 99999999999999999999999999876578
Q ss_pred eEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhcc---ccCCEEEEEecCCchhhhhH
Q 007074 220 KIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREAGL---EFAKQGVAITQENSLLDNTV 296 (619)
Q Consensus 220 ~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~---~~~~h~VaVT~~~s~L~~~A 296 (619)
++||++|+||+++.++++.|+|+ +||||||||||||.||+.|++.+|+||++++. .+++|+||||++.++ +
T Consensus 202 ~l~FvsNvDp~~l~~~L~~Ld~~--~TLfiViSKSgtT~ET~~n~~~ar~wl~~~~~~~~~~~khfVavTt~~~~----~ 275 (574)
T 3hjb_A 202 TVHFVSNVDGTHMAETLKNVDPE--TTLFLVASKTFTTQETMTNAHTARDWFLKAAGDEAHVAKHFAALSTNGKA----V 275 (574)
T ss_dssp EEEEECCSSHHHHHHHHTTCCGG--GEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCSGGGGGGTEEEESSCHHH----H
T ss_pred eEEEEeCCCHHHHHHHHhcCCcc--cEEEEEeCCCCCCHHHHHHHHHHHHHHHHhcCCcchhcCEEEEEcCChHH----H
Confidence 99999999999999999999985 99999999999999999999999999988643 267999999986443 4
Q ss_pred HHhCCc--ceeeccCCCCCcchhhhHhhHHHHHhcCCC-HHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHHHHHhcCCCC
Q 007074 297 RIEGWL--ARFPMFDWVGGRTSEMSAVGLLPAALQGID-VREMLAGASLMDEANRTTVLRNNPAALLALCWYWASDGVGS 373 (619)
Q Consensus 297 ~~~g~~--~~F~~pd~VGGRfSvlSaVGLlPaal~GiD-i~~lL~GA~~md~~~~~~~l~~N~a~llAl~~~~~~~~~g~ 373 (619)
++.|+. ++|+||||||||||+||+|||+|++++|+| |++||+||++||+||+++|+++|||++||++.+||.+++|+
T Consensus 276 ~~fgi~~~~~F~~~D~VGGRySvlSaVGL~pa~~~G~d~~~~lL~GA~~md~hf~~~~l~~N~p~llAll~iwy~~~~G~ 355 (574)
T 3hjb_A 276 AEFGIDTDNMFEFWDWVGGRYSLWSAIGLSIILSIGYDNFVELLAGAHEMDQHFVNTPFESNIPVILALIGIWYNNFHGA 355 (574)
T ss_dssp HHHTCCGGGEECCCTTSCGGGCTTTGGGHHHHHHHCHHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTSCC
T ss_pred HHcCCchhcEEeCCCCCCcchhhcchhHHHHHHHcChHHHHHHHHHHHHHHHHhhcCCcccCHHHHHHHHHHHHHhcCCC
Confidence 455763 699999999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred ceEEEEechhchHhHHHHHHHHHHhhcCccccCCCCccc--ccceEeecCCCCChhhHHHhhhccCCceeeEEEeeccCC
Q 007074 374 KDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVN--QGLTVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDR 451 (619)
Q Consensus 374 ~~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~dG~~v~--~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~~tFI~v~~~~ 451 (619)
++++++||+++|++|++|||||+|||+||++++||++|. +|+++||++||||||||+||||||++++|+|||.+.++.
T Consensus 356 ~~~~llpY~~~L~~f~~w~qQL~mES~GK~v~~~G~~v~~~tgpivwG~~GT~dQHSf~QlihqG~~~~~~tFI~~~~~~ 435 (574)
T 3hjb_A 356 ESEAILPYDQYLHRFAAYFQQGNMESNGKYVDRNGNPVTYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAVSH 435 (574)
T ss_dssp CEEEEEESCGGGTTHHHHHHHHHHHHHCCCBCTTSCBCSSCCCCEEECCCTTTTHHHHHHHHHHSSSCCCEEEEEESSCS
T ss_pred CeEEEEECcHHHHHHHHHHHHHHHhccCCccCCCCCccccCCcceeeCCCCCCchHHHHHHHHcCCCCceEEEEEECCCC
Confidence 999999999999999999999999999999999999986 899999999999999999999999999999999998754
Q ss_pred CC---CCcccc----------CCCCChHHHHHHhh-----ccchh-----hcccCCcceeEEEeccCChhhHHHHHHHHH
Q 007074 452 PP---GHDWEL----------EPGVTCGDYLFGML-----QGTRS-----ALYANDRESVTVTVQEVTPRSVGALVALYE 508 (619)
Q Consensus 452 ~~---~~~~~l----------~~g~t~~d~L~~~~-----~gt~~-----al~~ggrPs~tI~l~~l~~~~LGaLialyE 508 (619)
.+ +|+.++ ..|++.++++..+. .++.. ..++|||||++|+++++||++||+||||||
T Consensus 436 ~~~~~~~~~l~~N~lAQ~~al~~Gkt~~ev~~e~~~~g~~~~~~~~L~~hk~~~gnrPs~~I~l~~ltp~tLG~LialyE 515 (574)
T 3hjb_A 436 NLVGDHHQKLMSNFFAQTEALAFGKSAQAVQAELEKAGKSAAEIAALVPFKVFEGNRPTNSILVKQITPRTLGNLIAMYE 515 (574)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHTTCCHHHHHHHHHHHCBCCCCCEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCcchhhHHhhhhhHHHHHHHHCCCCHHHHHHHHHhcccchhhHHHhhhcccCCCCCceEEEEecCCChHHHHHHHHHHH
Confidence 32 122211 24777777554322 13433 346899999999999999999999999999
Q ss_pred HHHHHHHHhhCcCCCCCCchHHHHHHHHHHHH
Q 007074 509 RAVGIYASLVNINAYHQPGVEAGKKAAGEVLA 540 (619)
Q Consensus 509 ~av~~~g~L~gINpFDQPGVE~gK~~a~~il~ 540 (619)
|+|+++|+|||||||||||||+||++|++|+.
T Consensus 516 h~v~v~G~l~gINpFDQpGVElGK~la~~il~ 547 (574)
T 3hjb_A 516 HKIFVQGVIWNIFSFDQWGVELGKQLANQILP 547 (574)
T ss_dssp HHHHHHHHHTTCCSSCCGGGHHHHHHHHHHGG
T ss_pred HHHHHHHHHhCCCCCCChhHHHHHHHHHHHHH
Confidence 99999999999999999999999999987765
No 4
>3ujh_A Glucose-6-phosphate isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: G6Q; 2.10A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-123 Score=1032.05 Aligned_cols=456 Identities=32% Similarity=0.448 Sum_probs=407.4
Q ss_pred hhHHHHhhcCchhhHHHHHHHHhhccCc-ceEEEccCCCCCHHHHHHhHHHHHHH--HHHHHHHHhcCCCCCCccccccc
Q 007074 67 KKAKNGLEKDPRELWKRYVDWLYQHKEL-GLYLDVSRVGFTDEFVEEMEPRFQAA--FKAMEELEKGAIANPDEGRMVGH 143 (619)
Q Consensus 67 ~~l~~~f~~~~~~~~~r~~~~~~~~~~~-gl~lD~Sr~~i~~~~l~~l~~~~~~a--~~~~~~l~~G~~~N~~E~R~v~H 143 (619)
.+|+++|+ |+. |+.++ +.+.. ||++|||||++++++++.|.+.++++ .++|++||+|+++|.||+|+|+|
T Consensus 29 ~~l~~lf~-d~~----R~~~~--~~~~~~~l~~D~Sk~~~~~~~~~~l~~la~~~~~~~~~~~mf~G~~iN~tE~R~vlH 101 (567)
T 3ujh_A 29 LHLRDLLK-DEA----RNDLL--IRSTDQGVYLDFSRQKITLETLQHLVNLAHERQVPAMVKRMFSGEKINQTENRAVLH 101 (567)
T ss_dssp SCHHHHTT-CHH----HHHTT--EEECTTSCEEEEEESSCCHHHHHHHHHHHHHTTHHHHHHHHHTTCCCBTTTTBCCCG
T ss_pred CCHHHHhc-CcC----cchhh--eeeeCCCeeeehhcCcCCHHHHHHHHHHHHhCCcHHHHHHHhCCCCcCCCCCccccc
Confidence 45899995 877 89987 44577 99999999999999999999988766 78999999999999999999999
Q ss_pred ccccCCCCCC-----chhhhHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCC--
Q 007074 144 YWLRKPELAP-----NSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDN-- 216 (619)
Q Consensus 144 ~wLr~p~~~~-----~~~~~~~i~~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~-- 216 (619)
+|||.|...+ ..++.++|++++++|++|+++||+|.|+|+|| ++|++||+||||||+|||+|+++||+++.
T Consensus 102 ~aLR~~~~~~~~~~~g~~v~~~v~~~l~~i~~fa~~vrsg~~~g~tg--~~i~~vV~IGIGGS~LGp~~v~eAL~~~~~~ 179 (567)
T 3ujh_A 102 VALRMPEGSEPVHVDGKNVLDEVHAVLRRIRVFSEKVRSGEIRGHTG--KKLVNVISIGIGGSYLGTEFVHLALAAEGYA 179 (567)
T ss_dssp GGGGCCTTSCCCEETTEEHHHHHHHHHHHHHHHHHHHHHTSSBCTTS--CBCCEEEEECCGGGTHHHHHHHHHHHTCHHH
T ss_pred HHHhCCCCCCCcccCchhhHHHHHHHHHHHHHHHHHHHcCCcccCCC--CcceeEEEEecccchHHHHHHHHHhcccccc
Confidence 9999998876 34678899999999999999999999999999 99999999999999999999999999863
Q ss_pred ----CCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhc---c-ccCCEEEEEecC
Q 007074 217 ----PPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREAG---L-EFAKQGVAITQE 288 (619)
Q Consensus 217 ----~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g---~-~~~~h~VaVT~~ 288 (619)
.++++||++|+||+++.++++.|+|+ +||||||||||||.||+.|++.+|+||++++ . .+++||||||++
T Consensus 180 ~~~~~~~~~~FvsNvDp~~l~~~L~~L~~~--~TlfiViSKSgtT~ET~~n~~~~r~wl~~~~~~g~~~~~kh~vAvT~~ 257 (567)
T 3ujh_A 180 AEKAHGRQIHFLANVDPVDVWLAERGFDPE--ETLVVVISKTFTTAETMMNARSVRDWYLHHYKGDERALGAHFCAVSTN 257 (567)
T ss_dssp HHHTTTCEEEEECCSSHHHHHHHHTTCCGG--GEEEEEECSSSCCHHHHHHHHHHHHHHHHHTTTCGGGSGGGEEEECSC
T ss_pred ccccCCCeEEEEeCCCHHHHHHHHhhCCcc--cEEEEEEeCCCCCHHHHHHHHHHHHHHHHhccccchhhcCeEEEECCC
Confidence 46899999999999999999999985 9999999999999999999999999998763 2 358999999996
Q ss_pred CchhhhhHHHhCCc--ceeeccCCCCCcchhhhHhhHHHHHhc-CCC-HHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHH
Q 007074 289 NSLLDNTVRIEGWL--ARFPMFDWVGGRTSEMSAVGLLPAALQ-GID-VREMLAGASLMDEANRTTVLRNNPAALLALCW 364 (619)
Q Consensus 289 ~s~L~~~A~~~g~~--~~F~~pd~VGGRfSvlSaVGLlPaal~-GiD-i~~lL~GA~~md~~~~~~~l~~N~a~llAl~~ 364 (619)
. +.+++.|+. ++|+||||||||||+||+|||||++++ |+| |++||+||++||+||+++|+++|||++||+++
T Consensus 258 ~----~~~~~fgi~~~n~F~~~D~VGGRySvlSaVGLLPiAla~G~d~~~~lL~GA~~md~~f~~~~l~~N~p~llAl~~ 333 (567)
T 3ujh_A 258 L----DGTSKFGIQSDRVFGFWDWVGGRYSVTSAVGILPLALQYGYDVAQEFLNGAHAMDVHFKTAELADNLPMLMGLIS 333 (567)
T ss_dssp H----HHHHHHTCCGGGBCCCCTTSCGGGCTTSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHH
T ss_pred h----HHHHHcCCChhceecCccCCCCcchhhhhhhHHHHHHHcCchHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHHH
Confidence 3 345666873 599999999999999999999999996 999 89999999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEEechhchHhHHHHHHHHHHhhcCccccCCCCccc--ccceEeecCCCCChhhHHHhhhccCCceee
Q 007074 365 YWASDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVN--QGLTVYGNKGSTDQHAYIQQLREGVHNFFA 442 (619)
Q Consensus 365 ~~~~~~~g~~~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~dG~~v~--~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~~ 442 (619)
+|+.+++|+++++++||+++|++|++|||||+|||+||++++||++|. +|++|||+.||||||||+|||||| +++|+
T Consensus 334 ~w~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK~v~~~G~~v~~~tg~i~~G~~Gt~dQHSf~QlihqG-~~~~~ 412 (567)
T 3ujh_A 334 VWNATFFGYSNVAVLPYAQALLRFPAHIQQLTMESNGKRVTMDGKTLDFDVGEIFFGEPGTNGQHSFYQLIHQG-RVIPA 412 (567)
T ss_dssp HHHHHTSCCCEEEEEESCGGGTTHHHHHHHHHHHHHCCSBCTTSCBCSSCCSCEEECCCTTGGGGTTHHHHHHS-SCCCE
T ss_pred HHHHHcCCCCeEEEecccHHHHHHHHHHHHHHHhccCCccccCCceecccccceeecCCCCCchhHHHHHHHcC-CCcce
Confidence 999989999999999999999999999999999999999999999986 999999999999999999999999 69999
Q ss_pred EEEeeccCCCCCCccccC----------------------CCCChHHHHHHhhccch--hhcccCCcceeEEEeccCChh
Q 007074 443 TFIEVLRDRPPGHDWELE----------------------PGVTCGDYLFGMLQGTR--SALYANDRESVTVTVQEVTPR 498 (619)
Q Consensus 443 tFI~v~~~~~~~~~~~l~----------------------~g~t~~d~L~~~~~gt~--~al~~ggrPs~tI~l~~l~~~ 498 (619)
|||.+.++.. ++.+. .|++..+.......++. ++.++|||||++|+++++||+
T Consensus 413 ~FI~~~~~~~---~~~i~~~~~~~~~~ll~n~~aq~~aL~~Gkt~~ev~~~~~~~~l~~h~~~~GnrPs~~I~~~~l~p~ 489 (567)
T 3ujh_A 413 EFIGFCKSQR---AIKLKEEPVSNHDELMSNFFAQPDALAFGKTPEELRKEGIPEKLVPHKTFPGDRPSCMLLFPEISPF 489 (567)
T ss_dssp EEEEESSCTT---CCCCTTCSSCHHHHHHHHHHHHHHHHHHCBCHHHHHHHTCCTTTTTTTCBCCCCCEEEEEESCCCHH
T ss_pred EEEEECccCC---cccccccccccHHHHhhhhHHHHHHHHcCCCHHHHHhhhhhhhhhhhccCCCCCceEEEEeccCCHH
Confidence 9999986432 22111 13333333332233332 345789999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhCcCCCCCCchHHHHHHHHHHHHH
Q 007074 499 SVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLAL 541 (619)
Q Consensus 499 ~LGaLialyE~av~~~g~L~gINpFDQPGVE~gK~~a~~il~~ 541 (619)
+||+|||||||+|+++|+|||||||||||||+||++|+.|+.+
T Consensus 490 ~lG~Lia~yE~~~~v~G~l~gINpFDQpGVElGK~lA~~i~~~ 532 (567)
T 3ujh_A 490 HIGQLLALYEHRVAVEGWLWGINSFDQWGVELGKVLAKGVRGI 532 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCSSCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999655543
No 5
>3qki_A Glucose-6-phosphate isomerase; structural genomics, structural genomics consortium, SGC; 1.92A {Plasmodium falciparum} PDB: 3pr3_A
Probab=100.00 E-value=3.9e-123 Score=1030.93 Aligned_cols=456 Identities=30% Similarity=0.423 Sum_probs=407.1
Q ss_pred hhHHHHhhcCchhhHHHHHHHHhhccCcceEEEccCCCCCHHHHHHhHHHHHHH--HHHHHHHHhcCCCCCCcccccccc
Q 007074 67 KKAKNGLEKDPRELWKRYVDWLYQHKELGLYLDVSRVGFTDEFVEEMEPRFQAA--FKAMEELEKGAIANPDEGRMVGHY 144 (619)
Q Consensus 67 ~~l~~~f~~~~~~~~~r~~~~~~~~~~~gl~lD~Sr~~i~~~~l~~l~~~~~~a--~~~~~~l~~G~~~N~~E~R~v~H~ 144 (619)
.+|+++ +.|+. |+.++ +.+..||++|||||++++++++.|.+.++++ .++|++||+|+++|.||+|+|+|+
T Consensus 42 ~~l~~l-~~d~~----R~~~~--~~~~~~l~~D~Sk~~i~~~~~~~L~~la~~~~l~~~~~~mf~G~~iN~tE~R~vlH~ 114 (597)
T 3qki_A 42 KDLKDY-LNDKN----RSESL--IKKFKNFYMDLSRQRYSEKTLNKLVEYAEEVELKKKVEKTFMGEKVNMTENRSVLHT 114 (597)
T ss_dssp SCHHHH-TTCHH----HHHHH--EEEETTEEEEEEESSCCHHHHHHHHHHHHHTTHHHHHHHHHHTCCCBTTTTBCCCGG
T ss_pred CCHHHH-hcCcc----hhhhc--eeeeCCEEEEcccCcCCHHHHHHHHHHHHhcCcHHHHHHHhCCCCCCCCCCcccccH
Confidence 458988 88887 89987 4457899999999999999999999988765 789999999999999999999999
Q ss_pred cccCC----CCCC----chhhhHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCC
Q 007074 145 WLRKP----ELAP----NSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDN 216 (619)
Q Consensus 145 wLr~p----~~~~----~~~~~~~i~~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~ 216 (619)
|||.| ...+ ..++.++|++++++|++|+++||+|.|+|++| ++|++||+||||||+|||+|+++||+++.
T Consensus 115 aLR~~~~~~~~~~~~vdg~~v~~~v~~~l~~i~~fa~~vr~g~~~g~tg--k~~~~vV~IGIGGS~LGp~~v~eAL~~~~ 192 (597)
T 3qki_A 115 ALRIPIEKINTHKIIIDNKNVLEDVHGVLKKIEKYSDDIRNGVIKTCKN--TKFKNVICIGIGGSYLGTEFVYEAMKYYY 192 (597)
T ss_dssp GGGCCGGGTTTTCCEETTEEHHHHHHHHHHHHHHHHHHHHTTSSCCTTS--SCCCEEEEECCGGGTHHHHHHHHHHHHHH
T ss_pred HHhCccccccCCccccCchhhHHHHHHHHHHHHHHHHHHHcCCcccCCC--CcceeEEEEecccccHHHHHHHHHhccch
Confidence 99999 6655 24678999999999999999999999999999 99999999999999999999999997531
Q ss_pred ------C-----------------CceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 007074 217 ------P-----------------PLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFRE 273 (619)
Q Consensus 217 ------~-----------------~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~ 273 (619)
. ++++||++|+||+++.++++.|+|+ +||||||||||||.||+.||+.+|+||++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FvsNvDp~~l~~~L~~Ld~~--~TLfiViSKSgtT~ET~~n~~~~r~wl~~ 270 (597)
T 3qki_A 193 YNMELNKNEKDQVNNFNNNYDQDNVFNVRFLANVDPNDVNRAIQNLDQY--DTLVIIISKTFTTAETMLNARSIKKWLSL 270 (597)
T ss_dssp HHHTTSCCCTTCCCCTTCCCSSTTCCEEEEECCSSHHHHHHHHTTCCGG--GEEEEEECSSSCCHHHHHHHHHHHHHHTT
T ss_pred hcccccccccccccccccccccccCceEEEEeCCCHHHHHHHHhhCCcc--cEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 0 2569999999999999999999985 99999999999999999999999999987
Q ss_pred h-cc--ccCCEEEEEecCCchhhhhHHHhCCc--ceeeccCCCCCcchhhhHhhHHHHHhc-CCC-HHHHHHHHHHHhHH
Q 007074 274 A-GL--EFAKQGVAITQENSLLDNTVRIEGWL--ARFPMFDWVGGRTSEMSAVGLLPAALQ-GID-VREMLAGASLMDEA 346 (619)
Q Consensus 274 ~-g~--~~~~h~VaVT~~~s~L~~~A~~~g~~--~~F~~pd~VGGRfSvlSaVGLlPaal~-GiD-i~~lL~GA~~md~~ 346 (619)
+ |. .+++||||||++. +.+++.|+. ++|+||||||||||+||+|||||++++ |+| |++||+||++||+|
T Consensus 271 ~~g~~~~~~kh~vAvT~~~----~~a~~fGi~~~n~F~~~d~VGGRySvlSaVGLLPiAla~G~d~~~~lL~GA~~md~h 346 (597)
T 3qki_A 271 KIKDDENLSKHMVAVSTNL----KLTDEFGISRDNVFEFWDWVGGRFSVTSSVGILPLSIAFGYKNMRNFLNGCHDMDEH 346 (597)
T ss_dssp TCCSHHHHGGGEEEECSCH----HHHHHHTCCGGGEECCCTTSCGGGCTTSHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred hcCCcccccCeEEEECCCh----HHHHHcCCChhcEecCCcccCccccccchhhHHHHHHHcChHHHHHHHHhHHHHHHH
Confidence 6 42 3689999999963 466777873 499999999999999999999999996 999 99999999999999
Q ss_pred hcCCCcCCCHHHHHHHHHHHHhcCCCCceEEEEechhchHhHHHHHHHHHHhhcCccccCCCCccc--ccceEeecCCCC
Q 007074 347 NRTTVLRNNPAALLALCWYWASDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVN--QGLTVYGNKGST 424 (619)
Q Consensus 347 ~~~~~l~~N~a~llAl~~~~~~~~~g~~~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~dG~~v~--~G~~~~g~~Gt~ 424 (619)
|+++|+++|||++||++++|+.+++|+++++++||+++|++|++|||||+|||+||++++||++|. +|++|||+.|||
T Consensus 347 f~~~~l~~N~p~llAl~~~~~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK~v~~dG~~v~~~tg~i~~g~~GTn 426 (597)
T 3qki_A 347 FLHADLKENIPVLLALTSFYNSHFFDYKNVAILPYFQNLLKFSAHIQQLSMESNGKSVDRNNQPIHYNTCQVYFGEPGTN 426 (597)
T ss_dssp HHHSCGGGCHHHHHHHHHHHHHHHHCCCEEEEEESCGGGTTHHHHHHHHHHHHHCCSBBTTSCBCCSCCCCEEECCCTTT
T ss_pred hhCCChhhCHHHHHHHHHHHHHhcCCCCeEEEeeCcHHHHHHHHHHHHHHHhccCcccccCCCCcccCccceeecCCCCC
Confidence 999999999999999999999888999999999999999999999999999999999999999996 899999999999
Q ss_pred ChhhHHHhhhccCCceeeEEEeeccCCCCCCccccC----------------------CCCChHHHHHHh----hccc--
Q 007074 425 DQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELE----------------------PGVTCGDYLFGM----LQGT-- 476 (619)
Q Consensus 425 dQHS~~Qll~qG~~~~~~tFI~v~~~~~~~~~~~l~----------------------~g~t~~d~L~~~----~~gt-- 476 (619)
|||||+|||||| +++|+|||.+.++..+ +.++ .|++..+..... +.++
T Consensus 427 dQHSf~QlihqG-~~~~~~FI~~~~~~~~---~~i~~~~~~~~~~L~~N~laQ~~aL~~Gkt~~ev~~e~~~~g~~~~l~ 502 (597)
T 3qki_A 427 GQHSFYQLIHQG-QVIPVELIGFKHSHFP---IKFDKEVVSNHDELMTNFFAQADALAIGKTYEQVKEENEKNKMSPELL 502 (597)
T ss_dssp THHHHHHHHHHS-SCCCEEEEEESSCSSC---CCCTTSSSCHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHCCCGGGG
T ss_pred chHHHHHHHHcC-CCeeEEEEEECCCCCc---cccCcccccchhhhhhhhHHHHHHHHcCCCHHHHHHHhhhccchhhhh
Confidence 999999999999 9999999999874332 2121 133443332221 2223
Q ss_pred hhhcccCCcceeEEEeccCChhhHHHHHHHHHHHHHHHHHhhCcCCCCCCchHHHHHHHHHHHHH
Q 007074 477 RSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLAL 541 (619)
Q Consensus 477 ~~al~~ggrPs~tI~l~~l~~~~LGaLialyE~av~~~g~L~gINpFDQPGVE~gK~~a~~il~~ 541 (619)
.++.++|||||++|+++++||++||+|||||||+|+++|+|||||||||||||+||++|++|+..
T Consensus 503 ~h~~~~GnrPs~~I~l~~ltp~tLG~LialyEh~v~v~G~l~gINpFDQpGVElGK~lA~~i~~~ 567 (597)
T 3qki_A 503 THKVFNGNRPSTLLLFDELNFYTCGLLLSLYESRIVAEGFLLNINSFDQWGVELGKVLAKEVRNY 567 (597)
T ss_dssp GGGCBCCCCCEEEEEESCCCHHHHHHHHHHHHHHHHHHHHHTTBCTTCCGGGHHHHHHHHHHHHH
T ss_pred hhhhCCCCCceEEEEecCCChHHHHHHHHHHHHHHHHHhhhcCcCCCCChhHHHHHHHHHHHHHH
Confidence 23457899999999999999999999999999999999999999999999999999999888764
No 6
>2cxn_A Glucose-6-phosphate isomerase; 1.40A {Mus musculus} PDB: 2cvp_A 2cxo_A* 2cxp_A* 2cxq_A* 2cxr_A* 2cxs_A* 2cxt_A* 2cxu_A 1u0e_A 1u0f_A* 1u0g_A* 1jiq_A 1iri_A 1nuh_A* 1jlh_A 1iat_A 1hm5_A 1g98_A 1hox_A* 1xtb_A* ...
Probab=100.00 E-value=6.6e-119 Score=995.82 Aligned_cols=463 Identities=30% Similarity=0.428 Sum_probs=414.7
Q ss_pred chhHHHHhhcCchhhHHHHHHHHhh--ccCcceEEEccCCCCCHHHHHHhHHHHHHH--HHHHHHHHhcCCCCCCccccc
Q 007074 66 PKKAKNGLEKDPRELWKRYVDWLYQ--HKELGLYLDVSRVGFTDEFVEEMEPRFQAA--FKAMEELEKGAIANPDEGRMV 141 (619)
Q Consensus 66 ~~~l~~~f~~~~~~~~~r~~~~~~~--~~~~gl~lD~Sr~~i~~~~l~~l~~~~~~a--~~~~~~l~~G~~~N~~E~R~v 141 (619)
+.+|+++|+.|+. |+++|++. ++..||++|||||++++++++.|.+.++++ .+++++||+|+++|.||+|+|
T Consensus 23 ~~~l~~~f~~d~~----R~~~~~~~~~~~~~~~~~D~sk~~i~~~~~~~l~~la~~~~l~~~~~~mf~G~~iN~tE~R~v 98 (557)
T 2cxn_A 23 NLKLRELFEADPE----RFNNFSLNLNTNHGHILVDYSKNLVSKEVMQMLVELAKSRGVEAARDNMFSGSKINYTEDRAV 98 (557)
T ss_dssp GCCHHHHHHHCTT----HHHHTEEEEECSSCEEEEECTTSSCCHHHHHHHHHHHHHTTHHHHHHHHHTTCCCBTTTTBCC
T ss_pred CCCHHHHhhcChH----HHHhhhhccccCCCCEEEEcCCCCCCHHHHHHHHHHHHhcCHHHHHHHHhCCCCCCCCCCcch
Confidence 3569999999998 99998665 223499999999999999999999988776 788999999999999999999
Q ss_pred ccccccCCCCCC----chhhhHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCC-
Q 007074 142 GHYWLRKPELAP----NSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDN- 216 (619)
Q Consensus 142 ~H~wLr~p~~~~----~~~~~~~i~~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~- 216 (619)
+|+|||.|...| ..++.+++++++++|++|+++||+|+|+|++| ++|++||+||||||+|||++++++|+++.
T Consensus 99 lH~alR~~~~~~~~vdg~~v~~~v~~~l~~m~~fa~~vr~g~~~g~~g--~~i~~VV~IGIGGS~LGp~~v~~aL~~~~~ 176 (557)
T 2cxn_A 99 LHVALRNRSNTPIKVDGKDVMPEVNRVLDKMKSFCQRVRSGDWKGYTG--KSITDIINIGIGGSDLGPLMVTEALKPYSK 176 (557)
T ss_dssp CHHHHTCTTCCCCEETTEESHHHHHHHHHHHHHHHHHHHTTCSBCTTS--CBCCEEEEECCGGGTHHHHHHHHHTGGGGT
T ss_pred hHHHHhCCCCCCcccCCcccchhHHHHHHHHHHHHHHHHhCCcccCCC--CccceEEEEeccchHHHHHHHHHHHhhhcc
Confidence 999999998766 35778899999999999999999999999999 99999999999999999999999998873
Q ss_pred CCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHh-ccc--cCCEEEEEecCCchhh
Q 007074 217 PPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREA-GLE--FAKQGVAITQENSLLD 293 (619)
Q Consensus 217 ~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~-g~~--~~~h~VaVT~~~s~L~ 293 (619)
.++++||++|+||+++.++++.|++ ++|||||+||||||+||+.|++.+|+||.++ |.+ .++|+||||++++++
T Consensus 177 ~~~~v~fvsNvDp~~i~~~l~~L~~--e~TLvIViSKSGtT~ETl~na~~ar~~l~~~~G~~~~~~~h~VavTt~~s~~- 253 (557)
T 2cxn_A 177 GGPRVWFVSNIDGTHIAKTLASLSP--ETSLFIIASKTFTTQETITNAETAKEWFLEAAKDPSAVAKHFVALSTNTAKV- 253 (557)
T ss_dssp TSCEEEEECCSSHHHHHHHHTTCCT--TTEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCCGGGGGGTEEEEESCHHHH-
T ss_pred CCCeEEEEecCCHHHHHHHHhcCCC--CcEEEEEEcCCCCChhHHHHHHHHHHHHHHhcCccchhcCEEEEEeCCcHHH-
Confidence 4589999999999999999999987 4999999999999999999999999999876 532 579999999976444
Q ss_pred hhHHHhCCc--ceeeccCCCCCcchhhhHhhHHHHHhcCCC-HHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHHHHHhcC
Q 007074 294 NTVRIEGWL--ARFPMFDWVGGRTSEMSAVGLLPAALQGID-VREMLAGASLMDEANRTTVLRNNPAALLALCWYWASDG 370 (619)
Q Consensus 294 ~~A~~~g~~--~~F~~pd~VGGRfSvlSaVGLlPaal~GiD-i~~lL~GA~~md~~~~~~~l~~N~a~llAl~~~~~~~~ 370 (619)
++.|+. ++|+||||||||||+||+|||+|+++.|+| |++||+||++||+||+++++++|+|++||++++|+.++
T Consensus 254 ---~~~gi~~~~~F~~~d~VGGRySv~SaVGL~~a~~~G~d~~~~lL~GA~~md~~f~~~~l~~N~p~llal~~~~~~~~ 330 (557)
T 2cxn_A 254 ---KEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDHFEQLLSGAHWMDQHFLKTPLEKNAPVLLALLGIWYINC 330 (557)
T ss_dssp ---HHHTCCGGGEEECCTTSCGGGCTTTGGGHHHHHHHCHHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHT
T ss_pred ---HHcCCCcccEEEeecCCCcccHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhccCChhhCHHHHHHHHHHHHHhc
Confidence 444552 599999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CCCceEEEEechhchHhHHHHHHHHHHhhcCccccCCCCccc--ccceEeecCCCCChhhHHHhhhccCCceeeEEEeec
Q 007074 371 VGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVN--QGLTVYGNKGSTDQHAYIQQLREGVHNFFATFIEVL 448 (619)
Q Consensus 371 ~g~~~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~dG~~v~--~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~~tFI~v~ 448 (619)
+|+++++++||+++|++|++|||||+|||+||+++++|++|. +|++|||+.||||||||+||||||++++|+|||.+.
T Consensus 331 ~g~~~~~~lpY~~~L~~f~~w~qQL~mES~GK~v~~~G~~v~~~tgpi~~G~~Gt~dqHsf~QlihqG~~~~p~~FI~~~ 410 (557)
T 2cxn_A 331 YGCETHALLPYDQYMHRFAAYFQQGDMESNGKYITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPV 410 (557)
T ss_dssp SCCCEEEEEESCGGGTTHHHHHHHHHHHHHCCCBCTTSCBCSSCCCCEEECCCTTTTHHHHHHHHHHSSCCCCEEEEEEE
T ss_pred CCCCeEEEEEchHHHHHHHHHHHHHHHHhcCCccCCCCCCcccCCccccccCCCCCcchHHHHHHHhCCCCceeEEEEEC
Confidence 999999999999999999999999999999999999999997 999999999999999999999999999999999998
Q ss_pred cCCCCC-----Ccccc----------CCCCChHHHHHH-hhccc---------hhhcccCCcceeEEEeccCChhhHHHH
Q 007074 449 RDRPPG-----HDWEL----------EPGVTCGDYLFG-MLQGT---------RSALYANDRESVTVTVQEVTPRSVGAL 503 (619)
Q Consensus 449 ~~~~~~-----~~~~l----------~~g~t~~d~L~~-~~~gt---------~~al~~ggrPs~tI~l~~l~~~~LGaL 503 (619)
++..+. |+.+. ..|++..+.+.. ..+|+ .++.++|||||++|+++++||++||+|
T Consensus 411 ~~~~~~~~~~~~~~~~~n~laQ~~aL~~Gkt~~e~~~~~~~~g~~~~~~~~l~~h~~~~gnrPs~~I~~~~l~p~~LG~L 490 (557)
T 2cxn_A 411 QTQHPIRKGLHHKILLANFLAQTEALMKGKLPEEARKELQAAGKSPEDLEKLLPHKVFEGNRPTNSIVFTKLTPFILGAL 490 (557)
T ss_dssp ECSCCCGGGHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHTTCCHHHHHHHGGGGCBCCCCCEEEEEEEECCHHHHHHH
T ss_pred CCCCCCCcccccchhhccchhhHHHHHcCCCHHHHHHHHHhcCCchhhHHhhhhhcccCCCCceEEEEecCCChHHHHHH
Confidence 754321 11111 136666655433 23553 344568999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCcCCCCCCchHHHHHHHHHHHH
Q 007074 504 VALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLA 540 (619)
Q Consensus 504 ialyE~av~~~g~L~gINpFDQPGVE~gK~~a~~il~ 540 (619)
||||||+|+++|+|||||||||||||+||++|++|+.
T Consensus 491 ia~yE~~~~v~G~l~gINpFDQpGVElGK~la~~il~ 527 (557)
T 2cxn_A 491 IAMYEHKIFVQGIMWDINSFDQWGVELGKQLAKKIEP 527 (557)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCCGGGHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhhhcCcCCCCChhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999977765
No 7
>2wu8_A Glucose-6-phosphate isomerase; gluconeogenesis, 5-phosphoarabinonate (PAB), PGI, cytoplasm, glycolysis; 2.25A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.7e-118 Score=987.65 Aligned_cols=458 Identities=32% Similarity=0.451 Sum_probs=407.8
Q ss_pred chhHHHHhhcCchhhHHHHHHHHhhccCcceEEEccCCCCCHHHHHHhHHHHHHH--HHHHHHHHhcCCCCCCccccccc
Q 007074 66 PKKAKNGLEKDPRELWKRYVDWLYQHKELGLYLDVSRVGFTDEFVEEMEPRFQAA--FKAMEELEKGAIANPDEGRMVGH 143 (619)
Q Consensus 66 ~~~l~~~f~~~~~~~~~r~~~~~~~~~~~gl~lD~Sr~~i~~~~l~~l~~~~~~a--~~~~~~l~~G~~~N~~E~R~v~H 143 (619)
+.+|+++|+.|+. |+++|++. ..||++|||||++++++++.|.+.++++ .++|++||+|+++|.||+|+|+|
T Consensus 21 ~~~l~~lf~~d~~----R~~~~~~~--~~~~~~D~sk~~i~~~~~~~l~~la~~~~l~~~~~~mf~G~~iN~tE~R~vlH 94 (549)
T 2wu8_A 21 NTHLRQFFADDPG----RGRELTVS--VGDLYIDYSKHRVTRETLALLIDLARTAHLEERRDQMFAGVHINTSEDRAVLH 94 (549)
T ss_dssp TCCHHHHHHHCTT----HHHHSEEE--ETTEEEECCSSSCCHHHHHHHHHHHHHTTHHHHHHHHHHTCCCBTTTTBCCCG
T ss_pred CCcHHHHhhcChH----HHHhhhee--cCCEEEEcCCCCCCHHHHHHHHHHHHhcCHHHHHHHHhCCCCCCCCCCcccee
Confidence 3569999999998 99998555 5799999999999999999999988776 78899999999999999999999
Q ss_pred ccccCCCCCCc----hhhhHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCC-CC
Q 007074 144 YWLRKPELAPN----SFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDN-PP 218 (619)
Q Consensus 144 ~wLr~p~~~~~----~~~~~~i~~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~-~~ 218 (619)
+|||.|...|. .++.++|++++++|++|+++||+|+|+|++| ++|++||+||||||+|||++++++|+++. .+
T Consensus 95 ~alR~~~~~~~~v~g~~v~~~v~~~l~~i~~fa~~vr~g~~~g~~g--~~i~~VV~IGIGGS~LGp~~v~~aL~~~~~~~ 172 (549)
T 2wu8_A 95 TALRLPRDAELVVDGQDVVTDVHAVLDAMGAFTDRLRSGEWTGATG--KRISTVVNIGIGGSDLGPVMVYQALRHYADAG 172 (549)
T ss_dssp GGGGCCTTCCCEETTEEHHHHHHHHHHHHHHHHHHHHHTCSBCSSS--CBCCEEEEECCGGGTHHHHHHHHHTGGGCCSS
T ss_pred eeeecCCCCccccCCccchhhHHHHHHHHHHHHHHHHhCCcccCCC--CccceEEEEeccchHHHHHHHHHHHHhhccCC
Confidence 99999987662 4778899999999999999999999999999 99999999999999999999999999864 45
Q ss_pred ceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHh-cc-ccCCEEEEEecCCchhhhhH
Q 007074 219 LKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREA-GL-EFAKQGVAITQENSLLDNTV 296 (619)
Q Consensus 219 ~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~-g~-~~~~h~VaVT~~~s~L~~~A 296 (619)
+++||++|+||..+.++++.++++ +|||||+||||||+||+.|++.+++||+++ |. .+++|+||||+++++ +
T Consensus 173 ~~v~fvsNvDp~~~~~~l~~l~~e--~TLvIViSKSGtT~ETl~na~~ar~~l~~~~G~~~~~~h~VAvT~~~s~----~ 246 (549)
T 2wu8_A 173 ISARFVSNVDPADLIATLADLDPA--TTLFIVASKTFSTLETLTNATAARRWLTDALGDAAVSRHFVAVSTNKRL----V 246 (549)
T ss_dssp CEEEEECCSSHHHHHHHHTTCCGG--GEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCGGGGGGTEEEECSCHHH----H
T ss_pred CeEEEEccCCHHHHHHHHhcCCCC--cEEEEEEeCCCCCHhHHHHHHHHHHHHHHhcCcchhcCEEEEECCCcHH----H
Confidence 899999999999999999999874 999999999999999999999999999876 62 357999999997654 3
Q ss_pred HHhCCc--ceeeccCCCCCcchhhhHhhHHHHHh-cCCC-HHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHHHHHhcCCC
Q 007074 297 RIEGWL--ARFPMFDWVGGRTSEMSAVGLLPAAL-QGID-VREMLAGASLMDEANRTTVLRNNPAALLALCWYWASDGVG 372 (619)
Q Consensus 297 ~~~g~~--~~F~~pd~VGGRfSvlSaVGLlPaal-~GiD-i~~lL~GA~~md~~~~~~~l~~N~a~llAl~~~~~~~~~g 372 (619)
++.|+. ++|+||||||||||+||+|| ||+++ .|+| |++||+||++||+||+++++++|+|++||++++|+.+++|
T Consensus 247 ~~~gid~~~~F~~~d~VGGRySv~SaVG-L~~al~~G~d~~~~lL~GA~~md~~f~~~~~~~N~p~~lal~~~~~~~~~g 325 (549)
T 2wu8_A 247 DDFGINTDNMFGFWDWVGGRYSVDSAIG-LSLMTVIGRDAFADFLAGFHIIDRHFATAPLESNAPVLLGLIGLWYSNFFG 325 (549)
T ss_dssp HHHTCCGGGEECCCTTSCGGGCTTTGGG-HHHHHHHCHHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHSC
T ss_pred HhcCcccccEEEeeecCCcchHHHHHHH-HHHHHhcChhHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhCCC
Confidence 444542 79999999999999999999 56665 7999 8999999999999999999999999999999999998999
Q ss_pred CceEEEEechhchHhHHHHHHHHHHhhcCccccCCCCccc--ccceEeecCCCCChhhHHHhhhccCCceeeEEEeeccC
Q 007074 373 SKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVN--QGLTVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRD 450 (619)
Q Consensus 373 ~~~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~dG~~v~--~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~~tFI~v~~~ 450 (619)
+++++++||+++|++|++|||||+|||+||++++||++|. +|++|||+.||||||||+||||||++++|+|||.+.++
T Consensus 326 ~~~~~~lpY~~~L~~f~~w~qQL~mES~GK~v~~~G~~v~~~tgpi~~g~~Gt~dQHsf~Qli~qG~~~~p~~fI~~~~~ 405 (549)
T 2wu8_A 326 AQSRTVLPYSNDLSRFPAYLQQLTMESNGKSTRADGSPVSADTGEIFWGEPGTNGQHAFYQLLHQGTRLVPADFIGFAQP 405 (549)
T ss_dssp CCEEEEEESCGGGTTHHHHHHHHHHHHHCCSBBSSSCBCSSCCCCEEECCCTTTGGGTTHHHHHHSSCCCCEEEEEEEEC
T ss_pred CCeEEEEeChHHHHHHHHHHHHHHHHhcCCccCcCCCccccccccccccCCCCCcchHHHHHHHhCCCCcceEEEEEccC
Confidence 9999999999999999999999999999999999999996 89999999999999999999999999999999999865
Q ss_pred CCCCCccccCCCC-ChHH-----HH---HHhhcc----------ch-----hhcccCCcceeEEEeccCChhhHHHHHHH
Q 007074 451 RPPGHDWELEPGV-TCGD-----YL---FGMLQG----------TR-----SALYANDRESVTVTVQEVTPRSVGALVAL 506 (619)
Q Consensus 451 ~~~~~~~~l~~g~-t~~d-----~L---~~~~~g----------t~-----~al~~ggrPs~tI~l~~l~~~~LGaLial 506 (619)
.. ++.+++|. +.++ ++ .+++.| +. ++.++|||||++|+++++||++||+||||
T Consensus 406 ~~---~~~i~~~~~~~~~~~~~n~~aq~~al~~Gkt~~e~~~~g~~~~l~~h~~~~gnrPs~~I~~~~l~p~~LG~Lia~ 482 (549)
T 2wu8_A 406 LD---DLPTAEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAADGTPAHVVAHKVMPGNRPSTSILASRLTPSVLGQLIAL 482 (549)
T ss_dssp SS---CCCCTTSCSCHHHHHHHHHHHHHHHHHHCBCHHHHHTTTCCHHHHHHHCBCCCCCEEEEEEEECCHHHHHHHHHH
T ss_pred CC---cccccCCCchhhhhhhcchHHHHHHHHcCCCHHHHHHhhhHhhhhhhccCCCCCceEEEEEcCCChhHHHHHHHH
Confidence 42 23332221 1121 11 122333 22 45568999999999999999999999999
Q ss_pred HHHHHHHHHHhhCcCCCCCCchHHHHHHHHHHHHH
Q 007074 507 YERAVGIYASLVNINAYHQPGVEAGKKAAGEVLAL 541 (619)
Q Consensus 507 yE~av~~~g~L~gINpFDQPGVE~gK~~a~~il~~ 541 (619)
|||+|+++|+|||||||||||||+||++|++|+..
T Consensus 483 yE~~~~v~G~l~gINpFDQpGVElgK~la~~il~~ 517 (549)
T 2wu8_A 483 YEHQVFTEGVVWGIDSFDQWGVELGKTQAKALLPV 517 (549)
T ss_dssp HHHHHHHHHHHHTBCTTCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhCcCCCCChhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999877763
No 8
>2o2c_A GPI, glucose-6-phosphate isomerase, glycosomal, PGI, phosphohexose; dimer; HET: G6Q; 1.58A {Trypanosoma brucei brucei} PDB: 2o2d_A* 1q50_A
Probab=100.00 E-value=6e-118 Score=994.10 Aligned_cols=463 Identities=30% Similarity=0.419 Sum_probs=414.5
Q ss_pred chhHHHHhhcCchhhHHHHHHHHhhc-c----CcceEEEccCCCCCHHHHHHhHHHHHHHH--HHHHHHHhcCCCCCCcc
Q 007074 66 PKKAKNGLEKDPRELWKRYVDWLYQH-K----ELGLYLDVSRVGFTDEFVEEMEPRFQAAF--KAMEELEKGAIANPDEG 138 (619)
Q Consensus 66 ~~~l~~~f~~~~~~~~~r~~~~~~~~-~----~~gl~lD~Sr~~i~~~~l~~l~~~~~~a~--~~~~~l~~G~~~N~~E~ 138 (619)
..+|+++|+.|+. |+++|++.. . ..||++|||||++++++++.|.+.++++. +++++||+|+++|.||+
T Consensus 68 ~~~l~~lf~~d~~----R~~~~~~~~~~~~~~~~~l~~D~Sk~~i~~~~l~~L~~la~~~~l~~~~~~mf~G~~iN~tE~ 143 (613)
T 2o2c_A 68 DEPIKKHFETDSE----RGQRYSVKVSLGSKDENFLFLDYSKSHINDEIKCALLRLAEERGIRQFVQSVFRGERVNTTEN 143 (613)
T ss_dssp TSCHHHHHHHCTT----HHHHTEEEEECCCTTCCEEEEEEEESSCCHHHHHHHHHHHHHTTHHHHHHHHHTTCCCBTTTT
T ss_pred CCcHHHHhhhChH----HHHHHHhhhccccCCCCCEEEEecCCCCCHHHHHHHHHHHHhcCHHHHHHHHhCCCCCCCCCC
Confidence 3569999999998 999997765 3 34999999999999999999999887765 88999999999999999
Q ss_pred cccccccccCCCCCC----chhhhHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcC
Q 007074 139 RMVGHYWLRKPELAP----NSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAP 214 (619)
Q Consensus 139 R~v~H~wLr~p~~~~----~~~~~~~i~~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~ 214 (619)
|+|+|+|||.|...| ..++.+++++++++|++|+++||+|+|+|++| ++|++||+||||||+|||++++++|++
T Consensus 144 R~vlH~aLR~~~~~~~~vdg~dv~~~v~~~l~~i~~fa~~vrsg~~~g~tg--~~i~~VV~IGIGGS~LGp~~v~eaL~~ 221 (613)
T 2o2c_A 144 RPVLHIALRNRSNRPIYVDGKDVMPAVNKVLDQMRSFSEKVRTGEWKGHTG--KAIRHVVNIGIGGSDLGPVMATEALKP 221 (613)
T ss_dssp BCCCHHHHTCTTCCCCEETTEESHHHHHHHHHHHHHHHHHHHHTCSBCTTS--CBCCEEEEECCGGGTHHHHHHHHHTGG
T ss_pred CccccHhhcCCCCCCcccCCccccHhHHHHHHHHHHHHHHHHhCCcccCCC--CceeeEEEEeccchHHHHHHHHHHhhh
Confidence 999999999998766 24677889999999999999999999999999 999999999999999999999999988
Q ss_pred CC-CCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHh-c-------cccCCEEEEE
Q 007074 215 DN-PPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREA-G-------LEFAKQGVAI 285 (619)
Q Consensus 215 ~~-~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~-g-------~~~~~h~VaV 285 (619)
+. .++++||++|+||..+.++++.++++ +|||||+||||||+||+.|++.+|+||+++ | ...++|+|||
T Consensus 222 ~~~~~~~v~fvsNvDp~~i~~~l~~l~~e--~TLfIViSKSGTT~ETl~na~~ar~~l~~~~G~~g~~~~~~~a~h~VAV 299 (613)
T 2o2c_A 222 FSQRDLSLHFVSNVDGTHIAEVLKSIDIE--ATLFIVASKTFTTQETITNALSARRALLDYLRSRGIDEKGSVAKHFVAL 299 (613)
T ss_dssp GSCTTSEEEEECCSSHHHHHHHHHHCCGG--GEEEEEECSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHEEEE
T ss_pred hccCCceEEEEccCCHHHHHHHHhcCCCC--CEEEEEEeCCCCChhHHHHHHHHHHHHHHhcCCcccccchhhcCEEEEE
Confidence 73 35899999999999999999999884 999999999999999999999999998875 4 1346899999
Q ss_pred ecCCchhhhhHHHhCCc--ceeeccCCCCCcchhhhHhhHHHHHhcCCC-HHHHHHHHHHHhHHhcCCCcCCCHHHHHHH
Q 007074 286 TQENSLLDNTVRIEGWL--ARFPMFDWVGGRTSEMSAVGLLPAALQGID-VREMLAGASLMDEANRTTVLRNNPAALLAL 362 (619)
Q Consensus 286 T~~~s~L~~~A~~~g~~--~~F~~pd~VGGRfSvlSaVGLlPaal~GiD-i~~lL~GA~~md~~~~~~~l~~N~a~llAl 362 (619)
|++++++ ++.|+. ++|+||||||||||+||+|||+|+++.|+| |++||+||++||+||+++++++|+|++||+
T Consensus 300 Tt~~s~~----~~~gi~~~~~F~~~d~VGGRySvlSaVGL~~a~~~G~d~~~elL~GA~~md~~f~~a~l~~N~p~llal 375 (613)
T 2o2c_A 300 STNNQKV----KEFGIDEENMFQFWDWVGGRYSMWSAIGLPIMISIGYENFVELLTGAHVIDEHFANAPPEQNVPLLLAL 375 (613)
T ss_dssp ESCHHHH----HHHTCCGGGEEECCTTSCGGGCTTSGGGHHHHHHHCHHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHH
T ss_pred eCCcHHH----HHcCCCccceEeeecCCCcchHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhccCChhhCHHHHHHH
Confidence 9976444 444552 599999999999999999998888789999 999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEEechhchHhHHHHHHHHHHhhcCccccCCCCccc--ccceEeecCCCCChhhHHHhhhccCCce
Q 007074 363 CWYWASDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVN--QGLTVYGNKGSTDQHAYIQQLREGVHNF 440 (619)
Q Consensus 363 ~~~~~~~~~g~~~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~dG~~v~--~G~~~~g~~Gt~dQHS~~Qll~qG~~~~ 440 (619)
+.+|+.+++|+++++++||+++|++|++|||||+|||+||+++++|++|. +|++|||+.||||||||+||||||++++
T Consensus 376 l~iw~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK~v~~~G~~v~~~tgpi~~G~~Gt~dQHSf~QlihqG~~~~ 455 (613)
T 2o2c_A 376 VGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESNGKYVTRSGKTVSTLTGPIIFGEAGTNGQHAFYQLIHQGTNLI 455 (613)
T ss_dssp HHHHHHHTSCCCEEEEEEECGGGTTHHHHHHHHHHHHHCCSBCTTSCBCSSCCCCEEECCCTTGGGGTTHHHHHHSSSCC
T ss_pred HHHHHHhCCCCCeEEEEEChHHHHHHHHHHHHHHHHhcCCccCCCCCEeecCCccccccCCCCCcchHHHHHHHhCCCcc
Confidence 99999999999999999999999999999999999999999999999997 9999999999999999999999999999
Q ss_pred eeEEEeeccCCCCC---Cccc----------cCCCCChHHHHHH-hhccc----------hhhcccCCcceeEEEeccCC
Q 007074 441 FATFIEVLRDRPPG---HDWE----------LEPGVTCGDYLFG-MLQGT----------RSALYANDRESVTVTVQEVT 496 (619)
Q Consensus 441 ~~tFI~v~~~~~~~---~~~~----------l~~g~t~~d~L~~-~~~gt----------~~al~~ggrPs~tI~l~~l~ 496 (619)
|+|||.+.++..+. |+.+ +..|++..+.+.. ...|+ .++.++|||||++|+++++|
T Consensus 456 p~~FI~~~~~~~~~~~~~~~l~~N~lAQ~~aL~~Gkt~~e~~~~l~~~G~~~~~~~~~l~~h~~~~gnrPs~~I~l~~l~ 535 (613)
T 2o2c_A 456 PCDFIGAIQSQNKIGDHHKIFMSNFFAQTEALMIGKSPSEVRRELEAAGERSAEKINALLPHKTFIGGRPSNTLLIKSLT 535 (613)
T ss_dssp CEEEEEEEECSSCCTTHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHTTCCCHHHHHHHTTTTCBCCCCCEEEEEEEECC
T ss_pred eeEEEEECCCCCCchhhhhhhhcchhhhHHHHHcCCCHHHHHHHHHhcCCCchhhHhhhhhccccCCCCceEEEEecCCC
Confidence 99999998754321 1111 1136666665543 34565 34567899999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhCcCCCCCCchHHHHHHHHHHHH
Q 007074 497 PRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLA 540 (619)
Q Consensus 497 ~~~LGaLialyE~av~~~g~L~gINpFDQPGVE~gK~~a~~il~ 540 (619)
|++||+|||||||+|+++|+|||||||||||||+||++|++|+.
T Consensus 536 p~~LG~LialyE~~~~v~G~l~gINpFDQpGVElGK~la~~il~ 579 (613)
T 2o2c_A 536 PRALGAIIAMYEHKVLVQGAIWGIDSYDQWGVELGKVLAKSILP 579 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCTTCCGGGHHHHHHHHHHGG
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcCCCCChhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999977765
No 9
>1t10_A GPI, glucose-6-phosphate isomerase, PGI, phosphohexose; phosphoglucose isomerase, substrate, D-fructose-6-phosphate; HET: F6P; 2.35A {Leishmania mexicana mexicana} SCOP: c.80.1.2
Probab=100.00 E-value=5.9e-118 Score=992.95 Aligned_cols=463 Identities=30% Similarity=0.425 Sum_probs=413.3
Q ss_pred chhHHHHhhcCchhhHHHHHHHHhhc-c---CcceEEEccCCCCCHHHHHHhHHHHHHHH--HHHHHHHhcCCCCCCccc
Q 007074 66 PKKAKNGLEKDPRELWKRYVDWLYQH-K---ELGLYLDVSRVGFTDEFVEEMEPRFQAAF--KAMEELEKGAIANPDEGR 139 (619)
Q Consensus 66 ~~~l~~~f~~~~~~~~~r~~~~~~~~-~---~~gl~lD~Sr~~i~~~~l~~l~~~~~~a~--~~~~~l~~G~~~N~~E~R 139 (619)
..+|+++|+.|+. |+++|++.+ . ..||++|||||++++++++.|.+.++++. ++|++||+|+++|.||+|
T Consensus 68 ~~~l~~lf~~d~~----R~~~~~~~~~~~~~~~~l~~D~Sk~~i~~~~~~~L~~la~~~~l~~~~~~mf~G~~iN~tE~R 143 (605)
T 1t10_A 68 NDSILSHFEKDHQ----RFQRYSIEIDLHSDDNFLFLDYSKSHINDEIKDALVALAEERGVRAFAKAMFDGQRVNSTENR 143 (605)
T ss_dssp TSCHHHHHHHCTT----HHHHTEEEEECSSTTCEEEEECCSSSCCHHHHHHHHHHHHHTTHHHHHHHHHTTCCCBTTTTB
T ss_pred CCcHHHHhhcChH----HHHHHhhhhccCCCCCCEEEEccCCCCCHHHHHHHHHHHHhcChHHHHHHHhCCCCCCCCCCc
Confidence 3569999999998 999987765 2 33899999999999999999999887765 889999999999999999
Q ss_pred ccccccccCCCCCC----chhhhHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCC
Q 007074 140 MVGHYWLRKPELAP----NSFLKSQIETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPD 215 (619)
Q Consensus 140 ~v~H~wLr~p~~~~----~~~~~~~i~~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~ 215 (619)
+|+|+|||.|...| ..++.+++++++++|++|+++||+|+|+|++| ++|++||+||||||+|||++++++|+++
T Consensus 144 ~vlH~alR~~~~~~~~vdg~~v~~~v~~~l~~i~~fa~~vrsg~~~g~tg--~~i~~VV~IGIGGS~LGp~~v~~aL~~~ 221 (605)
T 1t10_A 144 AVLHVALRNRSNRPIIVDGKDVMSDVNNVLAQMKDFTERVRSGEWKGQTG--KSIYNIVNIGIGGSDLGPVMVTEALKPF 221 (605)
T ss_dssp CCCHHHHTCTTCCCCEETTEEHHHHHHHHHHHHHHHHHHHHHSCSBCTTS--CBCCEEEEECCGGGTHHHHHHHHHTGGG
T ss_pred chhhHhhhCCCCCCcccCCcccchhHHHHHHHHHHHHHHHHhCCcccCCC--CccceEEEEeccchHHHHHHHHHHhhhh
Confidence 99999999998766 34677889999999999999999999999999 9999999999999999999999999887
Q ss_pred C-CCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHh-cc-------ccCCEEEEEe
Q 007074 216 N-PPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREA-GL-------EFAKQGVAIT 286 (619)
Q Consensus 216 ~-~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~-g~-------~~~~h~VaVT 286 (619)
. .++++||++|+||.++.++++.++++ +|||||+||||||+||+.|++.+|+||.++ |. ..++|+||||
T Consensus 222 ~~~~~~v~fvsNvDp~~i~~~l~~l~~e--~TLfIViSKSGtT~ETl~na~~ar~~l~~~~g~~~~~~~~~~~~h~VavT 299 (605)
T 1t10_A 222 SKRDLHCFFVSNVDGTHMAEVLKQVNLE--ETIFIIASKTFTTQETLTNAMSARNALMSYLKENGISTDGAVAKHFVALS 299 (605)
T ss_dssp SCSSSEEEEECCSSTHHHHHHHTTSCGG--GEEEEEECSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHEEEEC
T ss_pred ccCCCeEEEEecCCHHHHHHHHhcCCCC--cEEEEEEeCCCCChhHHHHHHHHHHHHHHhcccccccccccccCEEEEEe
Confidence 3 35899999999999999999999884 999999999999999999999999999876 42 2468999999
Q ss_pred cCCchhhhhHHHhCCc--ceeeccCCCCCcchhhhHhhHHHHHhcCCC-HHHHHHHHHHHhHHhcCCCcCCCHHHHHHHH
Q 007074 287 QENSLLDNTVRIEGWL--ARFPMFDWVGGRTSEMSAVGLLPAALQGID-VREMLAGASLMDEANRTTVLRNNPAALLALC 363 (619)
Q Consensus 287 ~~~s~L~~~A~~~g~~--~~F~~pd~VGGRfSvlSaVGLlPaal~GiD-i~~lL~GA~~md~~~~~~~l~~N~a~llAl~ 363 (619)
++++++ ++.|+. ++|+||||||||||+||+|||+|+++.|+| |++||+||++||+||+++|+++|+|++||++
T Consensus 300 t~~s~~----~~~gi~~~~~F~~~d~VGGRySv~SaVGL~la~~~G~d~~~~lL~GA~~md~~f~~a~l~~N~p~llall 375 (605)
T 1t10_A 300 TNTEKV----REFGIDTVNMFAFWDWVGGRYSVWSAIGLSVMLSIGYDNFVEFLTGAHVMDNHFASTPTEQNLPMMLALV 375 (605)
T ss_dssp SCHHHH----HHTTCCGGGEECCCTTSCGGGCTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHH
T ss_pred CCchHH----HHcCCCcccEEeeeccCCcchHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHH
Confidence 976444 444553 589999999999999999999777789999 9999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEEechhchHhHHHHHHHHHHhhcCccccCCCCccc--ccceEeecCCCCChhhHHHhhhccCCcee
Q 007074 364 WYWASDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVN--QGLTVYGNKGSTDQHAYIQQLREGVHNFF 441 (619)
Q Consensus 364 ~~~~~~~~g~~~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~dG~~v~--~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~ 441 (619)
.+|+.+++|+++++++||+++|++|++|||||+|||+||+++++|++|. +|++|||+.||||||||+||||||++++|
T Consensus 376 ~~~~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK~v~~~G~~v~~~tgpi~~G~~Gt~dQHsf~QlihqG~~~~p 455 (605)
T 1t10_A 376 GIWYNNFFGSETQAVLPYDQYLWRLPAYLQQLDMESNGKGVTKKSGAVAVQTGPIVFGEAGTNGQHAFYQLIHQGTKIIP 455 (605)
T ss_dssp HHHHHHTTCCCEEEEEESSGGGTTHHHHHHHHHHHHHCCSBCTTCSBCSSCCCCEEECCCTTGGGGTTHHHHHHSSCCCC
T ss_pred HHHHHhCCCCCeEEEEECHHHHHHHHHHHHHHHHHhcCCccCCCCCCcccCCccccccCCCCCcchHHHHHHHhCCCcce
Confidence 9999999999999999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred eEEEeeccCCCCC---Cccc----------cCCCCChHHHHHHh-hccc---------hhhcccCCcceeEEEeccCChh
Q 007074 442 ATFIEVLRDRPPG---HDWE----------LEPGVTCGDYLFGM-LQGT---------RSALYANDRESVTVTVQEVTPR 498 (619)
Q Consensus 442 ~tFI~v~~~~~~~---~~~~----------l~~g~t~~d~L~~~-~~gt---------~~al~~ggrPs~tI~l~~l~~~ 498 (619)
+|||.+.++..+. |+.+ +..|++..+.+..+ ..|+ .++.++|||||++|+++++||+
T Consensus 456 ~~FI~~~~~~~~~~~~~~~l~~N~lAQ~~aL~~Gkt~~e~~~~~~~~g~~~~~~~~l~~h~~~~gnrPs~~I~l~~l~p~ 535 (605)
T 1t10_A 456 CDFIGCVQTQNRVGDHHRTLMSNFFAQTEALMVGKNAEEVRQELVKSGMSGDAIENMIPHKTFTGSRPSNSILVNALTPR 535 (605)
T ss_dssp EEEEEESSCSSSSSSHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHTTCCSSTTTTTGGGGCBCCCCCCEEEEESCCCHH
T ss_pred eEEEEECCCCCCchhhhhhhccchhhhHHHHHcCCCHHHHHHHHHhcCCChhhHHhhhhccccCCCCceEEEEecCCChH
Confidence 9999998754321 1111 11366666655432 3453 3445689999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhCcCCCCCCchHHHHHHHHHHHH
Q 007074 499 SVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLA 540 (619)
Q Consensus 499 ~LGaLialyE~av~~~g~L~gINpFDQPGVE~gK~~a~~il~ 540 (619)
+||+|||||||+|+++|+|||||||||||||+||++|++|+.
T Consensus 536 ~LG~LialyE~~~~v~G~l~gINpFDQpGVElGK~la~~il~ 577 (605)
T 1t10_A 536 ALGAIIAMYEHKVLVQGAIWGINSYDQWGVELGKVLAKSILP 577 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTCCGGGHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHhhhcCcCCCCChhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999977765
No 10
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=100.00 E-value=3.6e-107 Score=882.57 Aligned_cols=405 Identities=26% Similarity=0.331 Sum_probs=363.7
Q ss_pred ceEEEccCC--CCCHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCchhhhHHHHHHHHHHHHHH
Q 007074 95 GLYLDVSRV--GFTDEFVEEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLRKPELAPNSFLKSQIETTLDAVRKFA 172 (619)
Q Consensus 95 gl~lD~Sr~--~i~~~~l~~l~~~~~~a~~~~~~l~~G~~~N~~E~R~v~H~wLr~p~~~~~~~~~~~i~~~l~~I~~fa 172 (619)
.|.||||++ .+++++++.+++++.++++.|.+ +...+.+ .++|+++|...+ ++++++|++|+
T Consensus 6 ~i~~d~~~~~~~~~~~~~~~~~~~~~~a~~~l~~---~~~~g~d-----~lgwl~lp~~~~--------~~~l~~i~~~a 69 (446)
T 3ff1_A 6 HIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHE---GTGAGSD-----FLGWVDLPVDYD--------KEEFSRIVEAS 69 (446)
T ss_dssp SSEEECTTGGGSSCHHHHHTTHHHHHHHHHHHHH---TCSTTGG-----GCHHHHHHHHSC--------HHHHHHHHHHH
T ss_pred eEEEEhhhccccCCHHHHHHHHHHHHHHHHHHHh---hcCCCCC-----ccceeeCccccC--------HHHHHHHHHHH
Confidence 589999997 49999999999999999997765 3333321 267999986432 26899999999
Q ss_pred HHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCC----CCceEEEE-eCCChhHHHHHHHhhCcCCCcEE
Q 007074 173 DEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDN----PPLKIRFI-DNTDPAGIDHQIAQLGPELASTL 247 (619)
Q Consensus 173 ~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~----~~~~i~Fv-dN~DP~~i~~~l~~L~~~l~~TL 247 (619)
++||+ ++++||+||||||+|||+|+++||+++. .++++||+ ||+||+++.++++.|+| ++|+
T Consensus 70 ~~vr~-----------~~~~vV~IGIGGS~LGp~~v~eaL~~~~~~~~~~~~~~fv~dnvDp~~i~~~l~~l~~--~~Tl 136 (446)
T 3ff1_A 70 KRIKE-----------NSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYTKELVDYLAD--KDFS 136 (446)
T ss_dssp HHHHH-----------HCSEEEEECCGGGTHHHHHHHHHHSCSSCCCCSSCEEEEESSSCCHHHHHHHHHHGGG--CCEE
T ss_pred HHHhc-----------CCCEEEEEecchhHHHHHHHHHHHcchhhcccCCceEEEEecCCCHHHHHHHHHhcCc--cceE
Confidence 99994 4789999999999999999999999864 35899999 59999999999999998 4999
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHh-ccc-cCCEEEEEecCC-chhhhhHHHhCCcceeeccCCCCCcchhhhHhhHH
Q 007074 248 VVVISKSGGTPETRNGLLEVQKAFREA-GLE-FAKQGVAITQEN-SLLDNTVRIEGWLARFPMFDWVGGRTSEMSAVGLL 324 (619)
Q Consensus 248 vIViSKSGtT~ETl~~~~~a~~~l~~~-g~~-~~~h~VaVT~~~-s~L~~~A~~~g~~~~F~~pd~VGGRfSvlSaVGLl 324 (619)
||||||||||.||+.|++.+|+||+++ |.+ .++|+||||+++ |+|++.|+++|| ++|+||||||||||+||+|||+
T Consensus 137 ~iViSKSgtT~ET~~n~~~~r~~l~~~~g~~~~~~h~vavT~~~~g~L~~~a~~~G~-~~F~~~d~VGGRySv~SaVGLl 215 (446)
T 3ff1_A 137 VNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGALKQLATNEGY-ETFIVPDDVGGRYSVLTAVGLL 215 (446)
T ss_dssp EEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHEEEEECSSCSHHHHHHHHHTC-EEEECCTTCCGGGCTTSHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHhcCcccccceEEEEeCCCcchhhhHHHHcCC-eEEEeccccccchhhhhhhHHH
Confidence 999999999999999999999999876 543 568999999976 999999999999 8999999999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHH-HHHhcCCCCceEEEEechhchHhHHHHHHHHHHhhcCcc
Q 007074 325 PAALQGIDVREMLAGASLMDEANRTTVLRNNPAALLALCW-YWASDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKE 403 (619)
Q Consensus 325 Paal~GiDi~~lL~GA~~md~~~~~~~l~~N~a~llAl~~-~~~~~~~g~~~~vllpY~~~L~~f~~wlqQL~mESlGK~ 403 (619)
|++++|+||++||+||++||+||+++|+++|||++||+++ +|+. +|+++++++||+++|++|++|||||+|||+||+
T Consensus 216 p~a~~G~d~~~lL~GA~~md~~f~~~~~~~N~~~~~Al~~~~~~~--~G~~~~~l~pY~~~L~~f~~w~qQL~~ES~GK~ 293 (446)
T 3ff1_A 216 PIATAGINIEAMMIGAAKAREELSSDKLEENIAYQYATIRNILYA--KGYTTEMLINYEPSMQYFNEWWKQLFGESEGKD 293 (446)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHTCCCCGGGCHHHHHHHHHHHHHH--TTCCEEEEEESSGGGHHHHHHHHHHHHHHHCCT
T ss_pred HHHhcCccHHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHH--CCCCEEEEEeCcHhHHHHHHHHHHhhccccCCC
Confidence 9999999999999999999999999999999999999997 5665 699999999999999999999999999999998
Q ss_pred ccCCCCcccccceEeecCCCCChhhHHHhhhccCCceeeEEEeeccCCCC------CCcc---ccCCCCChHHHHHHhhc
Q 007074 404 FDLDGNRVNQGLTVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPP------GHDW---ELEPGVTCGDYLFGMLQ 474 (619)
Q Consensus 404 ~~~dG~~v~~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~~tFI~v~~~~~~------~~~~---~l~~g~t~~d~L~~~~~ 474 (619)
++|++|+++.||||||||+||||||++++|+|||.+.++..+ +++. .+..|++..+.++..+.
T Consensus 294 --------g~g~~p~~~~gt~dqHs~~Qli~qG~~~~~~tfi~~~~~~~~~~i~~~~~~~~~~n~l~Gkt~~e~~~~~~~ 365 (446)
T 3ff1_A 294 --------FKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDITIEKDSDDLDGLNYLAGKTIDEVNTKAFE 365 (446)
T ss_dssp --------TCCCEEEEEETTGGGGTTHHHHHHSCSCEEEEEEEESSCSSCCBCCCCSSCTTSGGGGTTCBHHHHHHHHHH
T ss_pred --------CCCCCcCCCCCCCCccchHHHHHcCCCcceEEEEeecCCCCCCCCCccccccchhhhhCCCCHHHHHHHhhH
Confidence 368999999999999999999999999999999999875421 1111 12358888888888899
Q ss_pred cchhhcccCCcceeEEEeccCChhhHHHHHHHHHHHHHHHHHhhCcCCCCCCchHHHHHHHHHHH
Q 007074 475 GTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVL 539 (619)
Q Consensus 475 gt~~al~~ggrPs~tI~l~~l~~~~LGaLialyE~av~~~g~L~gINpFDQPGVE~gK~~a~~il 539 (619)
||..+|++|||||++|+++++||++||+|||||||+|+++|+|||||||||||||+||++|.++|
T Consensus 366 ~t~~ah~~g~rP~~~i~~~~l~p~~lG~Lia~yE~~~~v~G~l~gINpFDQpGVElgK~~~~~lL 430 (446)
T 3ff1_A 366 GTLLAHTDGGVPNMVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALL 430 (446)
T ss_dssp HHHHHHHHTTCCEEEEEESCSSHHHHHHHHHHHHHHHHHHHHHHTSCTTCCGGGHHHHHHHHHHT
T ss_pred hhHHHhhcCCcceEEEEecCCCHhHHHHHHHHHHHHHHHHHHhcCcCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999776665
No 11
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Geobacillus stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A* 2pgi_A
Probab=100.00 E-value=5.8e-103 Score=852.20 Aligned_cols=408 Identities=26% Similarity=0.337 Sum_probs=366.2
Q ss_pred ceEEEccC-CC-CCHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCchhhhHHHHHHHHHHHHHH
Q 007074 95 GLYLDVSR-VG-FTDEFVEEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLRKPELAPNSFLKSQIETTLDAVRKFA 172 (619)
Q Consensus 95 gl~lD~Sr-~~-i~~~~l~~l~~~~~~a~~~~~~l~~G~~~N~~E~R~v~H~wLr~p~~~~~~~~~~~i~~~l~~I~~fa 172 (619)
.|++|+++ +. +++++++.+++++.++++.|. +|...+.+ .|+|+++|.... ++++++|++|+
T Consensus 2 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~g~d-----~lgw~~lp~~~~--------~~~~~~i~~~a 65 (445)
T 1b0z_A 2 AISFDYSNALPFMQENELDYLSEFVKAAHHMLH---ERKGPGSD-----FLGWVDWPIRYD--------KNEFSRIKQAA 65 (445)
T ss_dssp CEEEECGGGTTSSCHHHHHHTHHHHHHHHHHHH---TTCSTTGG-----GBTTTTHHHHSC--------HHHHHHHHHHH
T ss_pred eEEEEhhhhhccCCHHHHHHHHHHHHHHHHHHH---HhhccCcc-----ccCcccCCccCC--------HHHHHHHHHHH
Confidence 37899997 33 468999999999999988664 56665533 277999885211 37899999999
Q ss_pred HHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCC-----CCceEEEE-eCCChhHHHHHHHhhCcCCCcE
Q 007074 173 DEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDN-----PPLKIRFI-DNTDPAGIDHQIAQLGPELAST 246 (619)
Q Consensus 173 ~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~-----~~~~i~Fv-dN~DP~~i~~~l~~L~~~l~~T 246 (619)
++|| ++|++||+||||||+|||++++++|.++. ..++++|+ +|+||+.+.++++.|++ ++|
T Consensus 66 ~~v~-----------~~~~~VV~IGIGGS~LG~~~v~~aL~~~~~~~~~~~~~~~fv~~NvDp~~i~~~l~~l~~--~~T 132 (445)
T 1b0z_A 66 ERIR-----------NHSDALVVIGIGGSYLGARAAIEALSHTFHNQMNDTTQIYFAGQNISSTYISHLLDVLEG--KDL 132 (445)
T ss_dssp HHHH-----------HHCSEEEEECCGGGTHHHHHHHHHHSCTTGGGSTTSCEEEEESSSCCHHHHHHHHHHHTT--CCE
T ss_pred HHHH-----------hcCCEEEEEecChhHHHHHHHHHHHhhhcccccccCCceEEEeCCCCHHHHHHHHhhCCc--CcE
Confidence 9999 46999999999999999999999999875 23688998 99999999999999987 499
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHh-ccc-cCCEEEEEecCC-chhhhhHHHhCCcceeeccCCCCCcchhhhHhhH
Q 007074 247 LVVVISKSGGTPETRNGLLEVQKAFREA-GLE-FAKQGVAITQEN-SLLDNTVRIEGWLARFPMFDWVGGRTSEMSAVGL 323 (619)
Q Consensus 247 LvIViSKSGtT~ETl~~~~~a~~~l~~~-g~~-~~~h~VaVT~~~-s~L~~~A~~~g~~~~F~~pd~VGGRfSvlSaVGL 323 (619)
+|||+||||||.||+.+++.+++||+++ |.+ .++|+||||+++ |+|++.|+++|| ++|++|||||||||+||+|||
T Consensus 133 lviviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~~vavT~~~~g~L~~~a~~~Gi-~~F~~~d~VGGRySv~SavGl 211 (445)
T 1b0z_A 133 SINVISKSGTTTEPAIAFRIFRDYMEKKYGKEEARKRIYVTTDRTKGALKKLADQEGY-ETFVIPDNIGGRYSVLTAVGL 211 (445)
T ss_dssp EEEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHGGGEEEEECSSCSHHHHHHHHHTC-EEEECCTTBCSCCTTSTTTTH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHhcCchhhcCEEEEEecCCcchhHHHHHHhCC-eEEeccCCCCcccHHHHHHHH
Confidence 9999999999999999999999999864 533 569999999965 699999999999 899999999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHHHHHhcCCCCceEEEEechhchHhHHHHHHHHHHhhcCcc
Q 007074 324 LPAALQGIDVREMLAGASLMDEANRTTVLRNNPAALLALCWYWASDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKE 403 (619)
Q Consensus 324 lPaal~GiDi~~lL~GA~~md~~~~~~~l~~N~a~llAl~~~~~~~~~g~~~~vllpY~~~L~~f~~wlqQL~mESlGK~ 403 (619)
+|+++.|+||++||+||++||+||+++++++|||++||++++|+.++ |+++++++||+++|++|++|||||+|||+||+
T Consensus 212 lp~al~G~d~~~lL~GA~~md~~~~~~~~~~N~~~~lal~~~~~~~~-g~~~~~~~pY~~~L~~f~~w~qQL~~ES~GK~ 290 (445)
T 1b0z_A 212 LPIAVAGLNIDRMMEGAASAYHKYNNPDLLTNESYQYAAVRNILYRK-GKAIELLVNYEPSLHYVSEWWKQLFGESEGKD 290 (445)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHCCCCGGGCHHHHHHHHHHHHHHT-TCCEEEEEESSGGGHHHHHHHHHHHHHHHCCT
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHhhcCCcccCHHHHHHHHHHHHHhC-CCCeEEEEEchHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999998765 99999999999999999999999999999998
Q ss_pred ccCCCCcccccceEeecCCCCChhhHHHhhhccCCceeeEEEeeccCCCC-----C-Cccc---cCCCCChHHHHHHhhc
Q 007074 404 FDLDGNRVNQGLTVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPP-----G-HDWE---LEPGVTCGDYLFGMLQ 474 (619)
Q Consensus 404 ~~~dG~~v~~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~~tFI~v~~~~~~-----~-~~~~---l~~g~t~~d~L~~~~~ 474 (619)
| +|++|+|+.||||||||+||||||++++|+|||.+.++..+ . |+.+ +..|++.++.+.+.++
T Consensus 291 ----g----~g~~p~~~~gt~dqHs~~Qli~qG~~~~~~~fi~~~~~~~~~~~~~~~~~~~~~n~l~Gk~~~~~~~~~~~ 362 (445)
T 1b0z_A 291 ----Q----KGLFPASVDFTTDLHSMGQYVQEGRRNLIETVLHVKKPQIELTIQEDPENIDGLNFLAGKTLDEVNKKAFQ 362 (445)
T ss_dssp ----T----CCCEEEEEETTGGGGTTHHHHHHSCSCEEEEEEEEEECSSCCBCCCCSSCTTSCTTTTTCBHHHHHHHHHH
T ss_pred ----C----CCCcccCCCCCcchhhhHHHhhcCCcceeeEEEEecCCCCCCCCcccccchhhhhhhcCCCHHHHHHhhhh
Confidence 4 58999999999999999999999999999999999875422 1 3332 3358888888888888
Q ss_pred cchhhcccCCcceeEEEeccCChhhHHHHHHHHHHHHHHHHHhhCcCCCCCCchHHHHHHHHHHHHH
Q 007074 475 GTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLAL 541 (619)
Q Consensus 475 gt~~al~~ggrPs~tI~l~~l~~~~LGaLialyE~av~~~g~L~gINpFDQPGVE~gK~~a~~il~~ 541 (619)
||..+|.+|||||++|+++++||++||+|||||||+|+++|+|||||||||||||+||++|++||..
T Consensus 363 ~t~~a~~~g~~P~~~i~~~~l~~~~lG~Lia~yE~~~~v~G~l~gINpFDQpGVE~gK~~a~~ll~~ 429 (445)
T 1b0z_A 363 GTLLAHVDGGVPNLIVELDEMNEYTFGEMVYFFEKACGISGHLLGVNPFDQPGVEAYKKNMFALLGK 429 (445)
T ss_dssp HHHHHHHHTTCCEEEEEEEECSHHHHHHHHHHHHHHHHHHHHHHTSCTTCCTTHHHHHHHHHHHTTC
T ss_pred hhHhhhhhCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCcCCCCChhHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999998874
No 12
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=100.00 E-value=9.8e-101 Score=837.18 Aligned_cols=409 Identities=31% Similarity=0.446 Sum_probs=368.9
Q ss_pred hccCcceEEEccCC-------CCCHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCchhhhHHHH
Q 007074 90 QHKELGLYLDVSRV-------GFTDEFVEEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLRKPELAPNSFLKSQIE 162 (619)
Q Consensus 90 ~~~~~gl~lD~Sr~-------~i~~~~l~~l~~~~~~a~~~~~~l~~G~~~N~~E~R~v~H~wLr~p~~~~~~~~~~~i~ 162 (619)
+|....+.+|++.. .+++++++.+.+++..+++.+.+. . ..|+++|.
T Consensus 9 ~~~~~~~~~d~~~~~~~~~g~~i~~~~~~~~~~~l~~a~~~~~~~------------~--lgw~~lp~------------ 62 (460)
T 2q8n_A 9 HHHHMSLKFDFSNLFEPNISGGLTDEDVKSVEEKVTSAVRNFVEN------------T--PDFAKLDR------------ 62 (460)
T ss_dssp ---CCCCEEECGGGBTTTSTTCBCHHHHHHHHHHHHHHHHHHHHS------------C--CGGGGCCH------------
T ss_pred cccceeeeeeccccchhcccCCCCHHHHHHHHHHHHHHHHHHHHh------------c--CCccccch------------
Confidence 34456789999876 477788888888888776654331 1 34999885
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCC----------CceEEEEeCCChhHH
Q 007074 163 TTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNP----------PLKIRFIDNTDPAGI 232 (619)
Q Consensus 163 ~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~----------~~~i~FvdN~DP~~i 232 (619)
..+++|++|+++|+ ++++||+||||||+|||++++++|.++.. +++++|++|+||+.+
T Consensus 63 ~~~~~i~~~a~~i~------------~~~~Vv~IGIGGS~LG~~~~~~aL~~~~~~~~~~~~~~~~~~v~~~~nvdp~~~ 130 (460)
T 2q8n_A 63 SWIDSVKSLEDWII------------NFDTVVVLGIGGSGLGNLALHYSLRPLNWNEMTREERNGYARVFVVDNVDPDLM 130 (460)
T ss_dssp HHHHHHHTTHHHHT------------TCSEEEEECCGGGTHHHHHHHHHHSCTTGGGSCTTTTTTCCEEEEECSCCHHHH
T ss_pred hHHHHHHHHHHHhc------------CCCEEEEEecCchHHHHHHHHHHHHhhhhcccccccccCCcceEEecCCCHHHH
Confidence 22899999999996 38999999999999999999999987642 579999999999999
Q ss_pred HHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHh-ccccCCEEEEEecC-CchhhhhHHHhCCcceeeccCC
Q 007074 233 DHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREA-GLEFAKQGVAITQE-NSLLDNTVRIEGWLARFPMFDW 310 (619)
Q Consensus 233 ~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~-g~~~~~h~VaVT~~-~s~L~~~A~~~g~~~~F~~pd~ 310 (619)
.++++.|+++ +|+|||+||||||.||+.+++.+++||+++ | ++++|+||||++ +|+|.+.|+++|| ++|.+|||
T Consensus 131 ~~~l~~L~~~--~TlvIviSKSGtT~ET~~~~~~ar~~l~~~~G-~~~~~~VAvT~~~~s~L~~~A~~~Gi-~~f~~~d~ 206 (460)
T 2q8n_A 131 SSVLDRIDPK--TTLFNVISKSGSTAEVMATYSIARGILEAYGL-DPREHMLITTDPEKGFLRKLVKEEGF-RSLEVPPG 206 (460)
T ss_dssp HHHHTTCCGG--GEEEEEECSSSCCHHHHHHHHHHHHHHHHTTC-CGGGTEEEEECSSSSHHHHHHHHHTC-EEEECCTT
T ss_pred HHHHhcCCCC--CEEEEEEcCCCCCHHHHHHHHHHHHHHHHhcC-CccCeEEEEeCCCCChHHHHHHHhCC-ceEeeccc
Confidence 9999999874 999999999999999999999999999876 5 567999999996 8999999999999 99999999
Q ss_pred CCCcchhhhHhhHHHHHhcCCCHHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHHHHHhcCCCCceEEEEechhchHhHHH
Q 007074 311 VGGRTSEMSAVGLLPAALQGIDVREMLAGASLMDEANRTTVLRNNPAALLALCWYWASDGVGSKDMVVLPYKDSLLLFSR 390 (619)
Q Consensus 311 VGGRfSvlSaVGLlPaal~GiDi~~lL~GA~~md~~~~~~~l~~N~a~llAl~~~~~~~~~g~~~~vllpY~~~L~~f~~ 390 (619)
||||||+||+|||+|++++|+|+++||+||++||+||+++++++|||++||++.+|+. ++|+++++++||+++|++|++
T Consensus 207 VGGRySvlSavGL~~~~~~G~di~~lL~GA~~md~~~~~~~~~~N~~~~~a~~~~~~~-~~g~~~~~i~pY~~~L~~f~~ 285 (460)
T 2q8n_A 207 VGGRFSVLTPVGLLSAMAEGIDIDELHEGAKDAFEKSMKENILENPAAMIALTHYLYL-NKGKSISVMMAYSNRMIYLVD 285 (460)
T ss_dssp CCGGGCTTSHHHHHHHHHTTCCHHHHHHHHHHHHHHTTCSCGGGCHHHHHHHHHHHHH-HTTCCEEEEEESSGGGHHHHH
T ss_pred cCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhccCChhhCHHHHHHHHHHHHH-hCCCCeeEEecchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998887 789999999999999999999
Q ss_pred HHHHHHHhhcCccccCCCCcccccceEeecCCCCChhhHHHhhhccCCceeeEEEeeccCCCC----CC---ccccCCCC
Q 007074 391 YLQQLVMESLGKEFDLDGNRVNQGLTVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPP----GH---DWELEPGV 463 (619)
Q Consensus 391 wlqQL~mESlGK~~~~dG~~v~~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~~tFI~v~~~~~~----~~---~~~l~~g~ 463 (619)
|||||+||||||++++||++|++|++|+|+.||||||||+||||||++++|+|||.+.++..+ .+ ...+..|+
T Consensus 286 w~qQL~~ES~GK~~~~~g~~v~~g~~pvg~~gt~dqHs~~Qli~qG~~~~~~~fi~~~~~~~~~~i~~~~l~~~~~l~Gk 365 (460)
T 2q8n_A 286 WYRQLWAESLGKRYNLKGEEVFTGQTPVKALGATDQHSQIQLYNEGPNDKVITFLRVENFDREIVIPETGRAELSYLARK 365 (460)
T ss_dssp HHHHHHHHHHCCSBCTTSCBCCCCCEEEEEETTGGGGTTHHHHHHSCSCEEEEEEEECCCSSCCBCCCCSCGGGTTTTTS
T ss_pred HHhhhhhhhcCCccCCCCCCcCcCceeeeCCCCCchhHHHHHHHcCCCcEEEEEEEECCCCCccCCCchhhhHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999999875422 00 11255689
Q ss_pred ChHHHHHHhhccchhhcccCCcceeEEEeccCChhhHHHHHHHHHHHHHHHHHhhCcCCCCCCchHHHHHHHHHHHHH
Q 007074 464 TCGDYLFGMLQGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLAL 541 (619)
Q Consensus 464 t~~d~L~~~~~gt~~al~~ggrPs~tI~l~~l~~~~LGaLialyE~av~~~g~L~gINpFDQPGVE~gK~~a~~il~~ 541 (619)
+.++++.+.+.||..+|.+|||||++|+++++||++||+|||||||+|+++|+|||||||||||||+||++|++||..
T Consensus 366 t~~~~~~~~~~~t~~al~~g~rPs~~i~~~~l~~~~lG~Lia~yE~~~~v~G~l~gINpFDQpGVE~gK~~a~~ll~~ 443 (460)
T 2q8n_A 366 KLSELLLAEQTGTEEALRENNRPNMRVTFDGLTPYNVGQFFAYYEAATAFMGYLLEINPFDQPGVELGKKITFALMGR 443 (460)
T ss_dssp BHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCHHHHHHHHHHHHHHHHHHHHHTTSCTTCCGGGHHHHHHHHHHTTC
T ss_pred CHHHHHHhhhHHHHHHHHhCCcceEEEEecCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCChhHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999888753
No 13
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-99 Score=818.50 Aligned_cols=401 Identities=29% Similarity=0.377 Sum_probs=355.6
Q ss_pred eEEEccCC-CCCHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHHH
Q 007074 96 LYLDVSRV-GFTDEFVEEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLRKPELAPNSFLKSQIETTLDAVRKFADE 174 (619)
Q Consensus 96 l~lD~Sr~-~i~~~~l~~l~~~~~~a~~~~~~l~~G~~~N~~E~R~v~H~wLr~p~~~~~~~~~~~i~~~l~~I~~fa~~ 174 (619)
|.+|+++. .+ +++++.+++++.++++.+.. +.... .... .|+++|... ...++|+++++.
T Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~---~~~~g---~~~l--Gw~~lp~~~----------~~~~~i~~i~~~ 62 (415)
T 1zzg_A 2 LRLDTRFLPGF-PEALSRHGPLLEEARRRLLA---KRGEP---GSML--GWMDLPEDT----------ETLREVRRYREA 62 (415)
T ss_dssp CEEECTTCTTH-HHHHHHTHHHHHHHHHHHHH---TSSST---TCCC--GGGTGGGCT----------THHHHHHHHHHT
T ss_pred eEEEccccccc-HHHHHHHHHHHHHHHHHHHH---hhccC---cccC--CCccCcccc----------cCHHHHHHHHHH
Confidence 67899872 34 78999999999999887754 22211 1123 499988631 145677777776
Q ss_pred HHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCC
Q 007074 175 VVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKS 254 (619)
Q Consensus 175 i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKS 254 (619)
+ ++|++||+||||||+|||++++++|.+ .++++||++|+||+.+.++++.|+++ +|+|||+|||
T Consensus 63 -~-----------~~~~~Vv~iGIGGS~LG~~~~~~aL~~--~~~~~~~~~n~dp~~~~~~l~~l~~~--~TlviviSKS 126 (415)
T 1zzg_A 63 -N-----------PWVEDFVLIGIGGSALGPKALEAAFNE--SGVRFHYLDHVEPEPILRLLRTLDPR--KTLVNAVSKS 126 (415)
T ss_dssp -C-----------TTCSEEEEECCGGGTHHHHHHHHHHCC--SCCEEEEECSCCHHHHHHHHHHSCGG--GEEEEEEESS
T ss_pred -h-----------cCCCEEEEEccCccHHHHHHHHHHHhc--CCCceEEecCCCHHHHHHHHhhCCCC--CEEEEEEeCC
Confidence 5 468999999999999999999999987 45899999999999999999999874 9999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHh-ccccCCEEEEEecC-CchhhhhHHHhCCcceeeccCCCCCcchhhhHhhHHHHHhcCCC
Q 007074 255 GGTPETRNGLLEVQKAFREA-GLEFAKQGVAITQE-NSLLDNTVRIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQGID 332 (619)
Q Consensus 255 GtT~ETl~~~~~a~~~l~~~-g~~~~~h~VaVT~~-~s~L~~~A~~~g~~~~F~~pd~VGGRfSvlSaVGLlPaal~GiD 332 (619)
|||.||+.+++.+++||+++ |...++|+||||++ +|+|.+.|+++|| ++|++|||||||||+||+|||+|++++|+|
T Consensus 127 GtT~ET~~~~~~ar~~l~~~~G~~~~~~~vavT~~~~s~L~~~a~~~Gi-~~f~~~d~VGGRySv~SavGL~~~~~~G~d 205 (415)
T 1zzg_A 127 GSTAETLAGLAVFLKWLKAHLGEDWRRHLVVTTDPKEGPLRAFAEREGL-KAFAIPKEVGGRFSALSPVGLLPLAFAGAD 205 (415)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHGGGGGGGEEEEECSSSSHHHHHHHHHTC-EEEECCTTCCGGGCTTSHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHHHhcCccccCeEEEEeCCCCChHHHHHHHhCC-cEEEeccCCCcccHHHHHHHHHHHHHcCCC
Confidence 99999999999999998864 52346999999996 8999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHHHHHhcCCCCceEEEEechhchHhHHHHHHHHHHhhcCccccC-CCCcc
Q 007074 333 VREMLAGASLMDEANRTTVLRNNPAALLALCWYWASDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDL-DGNRV 411 (619)
Q Consensus 333 i~~lL~GA~~md~~~~~~~l~~N~a~llAl~~~~~~~~~g~~~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~-dG~~v 411 (619)
+++||+||++||+||+++ +++|||++||+ | +.+++|+++++++||+++|++|++|||||+|||+||++++ +|
T Consensus 206 ~~~lL~GA~~md~~~~~~-~~~N~~~~~al-~--~~~~~g~~~~~i~pY~~~l~~f~~~~qQL~~ES~GK~~~~~~g--- 278 (415)
T 1zzg_A 206 LDALLMGARKANETALAP-LEESLPLKTAL-L--LHLHRHLPVHVFMVYSERLSHLPSWFVQLHDESLGKVDRQGQR--- 278 (415)
T ss_dssp HHHHHHHHHHHHHHHHSC-GGGCHHHHHHH-H--HHHTTTSSEEEEEECCSTTTTHHHHHHHHHHHHHSEECTTSCE---
T ss_pred HHHHHHHHHHHHHHHhcc-hhhCHHHHHHH-H--HHHhCCCCeEEEEECcHHHHHHHHHHHHHHHhhhcCcccccCC---
Confidence 999999999999999998 99999999999 4 4457899999999999999999999999999999999987 55
Q ss_pred cccceEeecCCCCChhhHHHhhhccCCceeeEEEeeccCCCC-----CCcc---ccCCCCChHHHHHHhhccchhhcccC
Q 007074 412 NQGLTVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPP-----GHDW---ELEPGVTCGDYLFGMLQGTRSALYAN 483 (619)
Q Consensus 412 ~~G~~~~g~~Gt~dQHS~~Qll~qG~~~~~~tFI~v~~~~~~-----~~~~---~l~~g~t~~d~L~~~~~gt~~al~~g 483 (619)
+|++|||+.||||||||+||||||++++|+|||.+.+++.+ +|.+ .+..|++.++++.+.+.||..+|.+|
T Consensus 279 -~G~~p~g~~gt~~qHs~~Qli~qG~~~~~~~fi~~~~~~~~~~~~~~~~l~~~~~l~Gk~~~~~~~~~~~~~~~al~~g 357 (415)
T 1zzg_A 279 -VGTTAVPALGPKDQHAQVQLFREGPLDKLLALVIPEAPLEDVEIPEVEGLEAASYLFGKTLFQLLKAEAEATYEALAEA 357 (415)
T ss_dssp -ECCEEEEEETTGGGGTTHHHHHHSCSCEEEEEEEESCCSSCCBCCCCTTCGGGTTTTTSBHHHHHHHHHHHHHHHHHHT
T ss_pred -CcceeecCCCCccchhHHHHhhcCCCcEEEEEEEECCCCCCcCCcchhhhhHHHHhcCCCHHHHHHHhhHHHHHHHHhC
Confidence 59999999999999999999999999999999999875432 1111 24568999999999999999999999
Q ss_pred CcceeEEEeccCChhhHHHHHHHHHHHHHHHHHhhCcCCCCCCchHHHHHHHHHHHH
Q 007074 484 DRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLA 540 (619)
Q Consensus 484 grPs~tI~l~~l~~~~LGaLialyE~av~~~g~L~gINpFDQPGVE~gK~~a~~il~ 540 (619)
||||++|+++++||++||+|||||||+|+++|+|||||||||||||+||++|++||.
T Consensus 358 ~~P~~~i~~~~l~~~~lG~Li~~yE~~~~v~g~l~~INpFDQpGVE~gK~~a~~llg 414 (415)
T 1zzg_A 358 GQRVYALFLPEVSPYAVGWLMQHLMWQTAFLGELWEVNAFDQPGVELGKVLTRKRLA 414 (415)
T ss_dssp TCEEEEEEESSSSHHHHHHHHHHHHHHHHHHHHHTTSCTTCCGGGHHHHHHHHHHHH
T ss_pred CcceEEEEecCCChhHHHHHHHHHHHHHHHHHHhcCcCCCCChhHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999875
No 14
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=98.89 E-value=3.5e-08 Score=93.65 Aligned_cols=132 Identities=17% Similarity=0.175 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCc
Q 007074 166 DAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAS 245 (619)
Q Consensus 166 ~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~ 245 (619)
+.++++++.+.+ .+.|+++|+|+|+..++.+...|... +++++++.. |+..+...+..+++ +
T Consensus 27 ~~l~~~~~~i~~------------a~~I~i~G~G~S~~~a~~~~~~l~~~--g~~~~~~~~-~~~~~~~~~~~~~~---~ 88 (187)
T 3sho_A 27 EAIEAAVEAICR------------ADHVIVVGMGFSAAVAVFLGHGLNSL--GIRTTVLTE-GGSTLTITLANLRP---T 88 (187)
T ss_dssp HHHHHHHHHHHH------------CSEEEEECCGGGHHHHHHHHHHHHHT--TCCEEEECC-CTHHHHHHHHTCCT---T
T ss_pred HHHHHHHHHHHh------------CCEEEEEecCchHHHHHHHHHHHHhc--CCCEEEecC-CchhHHHHHhcCCC---C
Confidence 456677777764 36899999999999998888877643 356776652 45666666777774 7
Q ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccCCC----CCcchhhhH
Q 007074 246 TLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFDWV----GGRTSEMSA 320 (619)
Q Consensus 246 TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd~V----GGRfSvlSa 320 (619)
.++|++|+||.|.|+...++.+++. +.++|+||+ ++++|.+.|+ + ++.+|..- ..|.+.+..
T Consensus 89 d~~i~iS~sG~t~~~~~~~~~ak~~--------g~~vi~IT~~~~s~l~~~ad---~--~l~~~~~~~~~~~S~~~~~~l 155 (187)
T 3sho_A 89 DLMIGVSVWRYLRDTVAALAGAAER--------GVPTMALTDSSVSPPARIAD---H--VLVAATRGVGHSLSPVGLIAV 155 (187)
T ss_dssp EEEEEECCSSCCHHHHHHHHHHHHT--------TCCEEEEESCTTSHHHHHCS---E--EEECCCCCSSSSCCCHHHHHH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHC--------CCCEEEEeCCCCCcchhhCc---E--EEEecCCCCcccccHhHHHHH
Confidence 9999999999999999999998873 788999998 4788888773 2 55565432 234444555
Q ss_pred hhHHHHHh
Q 007074 321 VGLLPAAL 328 (619)
Q Consensus 321 VGLlPaal 328 (619)
+-++...+
T Consensus 156 ~d~L~~~~ 163 (187)
T 3sho_A 156 VNLLLAEI 163 (187)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55444444
No 15
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=98.77 E-value=4.1e-08 Score=103.67 Aligned_cols=157 Identities=15% Similarity=0.179 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHH-cCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcC
Q 007074 164 TLDAVRKFADEVV-SGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPE 242 (619)
Q Consensus 164 ~l~~I~~fa~~i~-~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~ 242 (619)
..++|+++++.|. + ++.++|+++|+|+|+.....+...|.....++++.+.. +.+........++
T Consensus 23 ~~~~i~~~~~~i~~~----------~~a~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~--~~e~~~~~~~~l~-- 88 (347)
T 3fkj_A 23 AHENARRIISDILGK----------QNIERVWFVGCGGSLTGFWPGKYFLDCEASKLAVGYIT--SNEFVHATPKALG-- 88 (347)
T ss_dssp HHHHHHHHHHHHHTT----------SCCCEEEEEESTHHHHTTHHHHHHHHHHCSSCEEEEEE--HHHHHHSCCTTCS--
T ss_pred CHHHHHHHHHHHHhh----------CCCCEEEEEEehHHHHHHHHHHHHHHHHhCCCeEEEeC--cHHHHhhCcCCCC--
Confidence 5678889999987 3 45789999999999998888888776432135555543 2333222222343
Q ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccC-----CCCCcch
Q 007074 243 LASTLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFD-----WVGGRTS 316 (619)
Q Consensus 243 l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd-----~VGGRfS 316 (619)
+++++|++|.||.|.||+..++.+++. +.++|+||. ++|+|.+.| .+ ++.++. .+|--++
T Consensus 89 -~~dlvI~iS~SG~T~e~l~a~~~ak~~--------Ga~~iaIT~~~~S~La~~a---d~--~l~~~~g~g~~e~~~~t~ 154 (347)
T 3fkj_A 89 -KNSVVILASQQGNTAETVAAARVAREK--------GAATIGLVYQPDTPLCEYS---DY--IIEYQWARYPETVDPAQQ 154 (347)
T ss_dssp -TTEEEEEEESSSCCHHHHHHHHHHHHH--------TCEEEEEESSTTCHHHHTC---SE--EEECBCCCTTSCCCGGGB
T ss_pred -CCCEEEEEeCCCCcHHHHHHHHHHHHC--------CCcEEEEeCCCCChHHhhc---Ce--EEEeccCCCCCccchhHH
Confidence 489999999999999999999999873 789999997 578888877 32 455543 2332222
Q ss_pred hhhHhhHHHHHh---c-CC-CHHHHHHHHHHHhHHhc
Q 007074 317 EMSAVGLLPAAL---Q-GI-DVREMLAGASLMDEANR 348 (619)
Q Consensus 317 vlSaVGLlPaal---~-Gi-Di~~lL~GA~~md~~~~ 348 (619)
-++..-++-+.+ . +. +.++++++-+.+.+...
T Consensus 155 ~~~~l~llal~l~~~~~~~~~~~~~~~~l~~lp~~~~ 191 (347)
T 3fkj_A 155 KAAYSLWLALEILAQTEGYAQYDELVSAFGRFSDVVH 191 (347)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 233222222212 1 33 36778777666665543
No 16
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=98.77 E-value=4.3e-08 Score=102.55 Aligned_cols=158 Identities=16% Similarity=0.146 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcC
Q 007074 163 TTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPE 242 (619)
Q Consensus 163 ~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~ 242 (619)
+..++|+++++.|.+ ++.++|+++|+|+|+.....+...|.....++++.++. +.+........++
T Consensus 8 ~~~~~i~~~v~~i~~----------~~~~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~--~~e~~~~~~~~l~-- 73 (329)
T 3eua_A 8 KVNREVQAFLQDLKG----------KTIDHVFFVACGGSSAIMYPSKYVFDRESKSINSDLYS--ANEFIQRNPVQLG-- 73 (329)
T ss_dssp GSCHHHHHHHHHHTT----------CCCCEEEEEECTHHHHTTHHHHHHHHHHCSSCEEEEEE--HHHHHHHCCTTCS--
T ss_pred HHHHHHHHHHHHHHH----------CCCCEEEEEEccHHHHHHHHHHHHHHHhcCCCeEEEEc--cHHHHhcCccCCC--
Confidence 456788899999974 45789999999999999888888876442135666553 3333332222344
Q ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeecc--CCCCCc---ch
Q 007074 243 LASTLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMF--DWVGGR---TS 316 (619)
Q Consensus 243 l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~p--d~VGGR---fS 316 (619)
+++++|++|.||.|.||+..++.+++. +.++|+||. ++|+|.+.| .+ ++.++ +.+|-- |+
T Consensus 74 -~~dlvI~iS~SG~T~e~l~a~~~ak~~--------Ga~~iaIT~~~~S~La~~a---d~--~l~~~~g~e~~va~t~~~ 139 (329)
T 3eua_A 74 -EKSLVILCSHSGNTPETVKAAAFARGK--------GALTIAMTFKPESPLAQEA---QY--VAQYDWGDEALAINTNYG 139 (329)
T ss_dssp -TTEEEEEEESSSCCHHHHHHHHHHHHT--------TCEEEEEESCTTSHHHHHS---SE--EEECCCSTTCCGGGSHHH
T ss_pred -CCcEEEEEcCCCCCHHHHHHHHHHHHC--------CCCEEEEECCCCChHHHhC---CE--EEEeCCCCccchhhHHHH
Confidence 489999999999999999999999872 789999997 578888877 32 44443 333211 22
Q ss_pred hhhHhhHHHHHhc-CC-CHHHHHHHHHHHhHHhc
Q 007074 317 EMSAVGLLPAALQ-GI-DVREMLAGASLMDEANR 348 (619)
Q Consensus 317 vlSaVGLlPaal~-Gi-Di~~lL~GA~~md~~~~ 348 (619)
.+..+.+..+... +. +.+++++.-+.+.+...
T Consensus 140 ~l~~la~~l~~~~~~~~~~~~~~~~l~~lp~~~~ 173 (329)
T 3eua_A 140 VLYQIVFGTLQVLENNTKFEQAIEGLDQLQAVYE 173 (329)
T ss_dssp HHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 2221111111111 33 37788877777666554
No 17
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.63 E-value=1.4e-07 Score=100.33 Aligned_cols=100 Identities=20% Similarity=0.096 Sum_probs=73.3
Q ss_pred cceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHH
Q 007074 190 FTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQK 269 (619)
Q Consensus 190 ~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~ 269 (619)
.+.|+++|+|+|+.....+...|.... ++++.++ ++..+......++ +++++|++|.||.|.||+..++.+++
T Consensus 50 ~~~I~i~G~G~S~~~a~~~~~~l~~~~-g~~v~~~---~~~~~~~~~~~~~---~~dlvI~iS~SG~T~e~l~a~~~ak~ 122 (373)
T 2aml_A 50 AKEWLILATGSSLNAAQSAKYYIENLA-DVRITIE---EPFNHLYYEKLSS---HLDLVIGISQSGQSTSTISALERVKK 122 (373)
T ss_dssp CCEEEEEECHHHHHHHHHHHHHHHHHS-SCEEEEE---CHHHHHHHCCCCT---TCCEEEEECSSSCBHHHHHHHHHHHH
T ss_pred CCEEEEEEecHHHHHHHHHHHHHHHHh-CCcEEEE---CchhHHHhccCCC---CCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 578999999999998888877775432 2456555 3444332212233 48999999999999999999999986
Q ss_pred HHHHhcccc-CCEEEEEec-CCchhhhhHHHhCCcceeeccC
Q 007074 270 AFREAGLEF-AKQGVAITQ-ENSLLDNTVRIEGWLARFPMFD 309 (619)
Q Consensus 270 ~l~~~g~~~-~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd 309 (619)
. +.++|+||+ .+|+|.+.|+ + ++.++.
T Consensus 123 --------~~Ga~vIaIT~~~~S~La~~ad---~--~l~~~~ 151 (373)
T 2aml_A 123 --------EASVPVVALTSDVTSEIAEFAD---I--TLDIGS 151 (373)
T ss_dssp --------HCCCCEEEEESCTTSGGGGGCS---E--EEECSC
T ss_pred --------hCCCcEEEEECCCCChHHHhcC---c--ceecCC
Confidence 2 567999998 4788888873 2 566653
No 18
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=98.60 E-value=1.6e-07 Score=98.77 Aligned_cols=108 Identities=20% Similarity=0.191 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCC
Q 007074 165 LDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELA 244 (619)
Q Consensus 165 l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~ 244 (619)
.+.++++++.++. .+.++|+++|+|+|+..+..+...|.... ++++.++ +|........... .+
T Consensus 27 ~~~~~~~~~~i~~----------~~~~~I~i~G~G~S~~aa~~~~~~l~~~~-g~~v~~~---~~~~~~~~~~~~~--~~ 90 (334)
T 3hba_A 27 DAITESLGSVLRE----------FKPKFVMIVGRGSSDHAGVFAKYLFEIEA-SIPTFAA---APSVASVYGKTLK--LA 90 (334)
T ss_dssp HHHHHHHHHHHHH----------HCCSCEEEESSGGGCHHHHHHHHHHHHHH-CCCEEEC---CHHHHHTSCCCCC--CT
T ss_pred HHHHHHHHHHHHh----------CCCCEEEEEEechHHHHHHHHHHHHHHHh-CCcEEEE---cchHHHHhcccCC--CC
Confidence 3456777777753 45789999999999999988887775422 2455554 2322211111111 15
Q ss_pred cEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhH
Q 007074 245 STLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTV 296 (619)
Q Consensus 245 ~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A 296 (619)
++++|++|.||.|.||+..++.+++. +.++|+||. ++|+|.+.|
T Consensus 91 ~dl~i~iS~SG~T~e~~~a~~~ak~~--------g~~~i~IT~~~~S~la~~a 135 (334)
T 3hba_A 91 GGLVIVISQSGRSPDILAQARMAKNA--------GAFCVALVNDETAPIKDIV 135 (334)
T ss_dssp TCEEEEEESSSCCHHHHHHHHHHHHT--------TCEEEEEESCTTSGGGGTS
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHc--------CCcEEEEeCCCCChHHHhc
Confidence 89999999999999999999999872 789999998 589888887
No 19
>1wiw_A Glucose-6-phosphate isomerase like protein; riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.80.1.1
Probab=98.60 E-value=2.8e-07 Score=95.41 Aligned_cols=246 Identities=15% Similarity=-0.008 Sum_probs=143.6
Q ss_pred CCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHH
Q 007074 188 GRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEV 267 (619)
Q Consensus 188 ~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a 267 (619)
.+++.|| ||||| .++...+ .=|.+ +++ .|+||++| .+.+
T Consensus 36 ~~pr~VV--G~GgS----dll~al~--------------~lP~w-------vg~---~dlvia~S----------a~~~- 74 (290)
T 1wiw_A 36 PGPHAAL--GYGEG----QFAALLS--------------GLPDW-------GEE---GTLFLLEG----------GYDL- 74 (290)
T ss_dssp CSSEEEE--EEGGG----HHHHHHH--------------TCCSC-------CSS---SEEEEEEC----------SSCT-
T ss_pred CCCCEEE--eeCHH----HHHHHHH--------------cCCCc-------cCC---CCEEEEec----------HHHH-
Confidence 3567888 99999 4454444 11222 453 89999999 1111
Q ss_pred HHHHHHhccccCCEEEEEecCCchhhhhHHHhCCcceeeccCCCCCcchhhhHhhHHHHHhcC--CCHHHHHHHHHHHhH
Q 007074 268 QKAFREAGLEFAKQGVAITQENSLLDNTVRIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQG--IDVREMLAGASLMDE 345 (619)
Q Consensus 268 ~~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~~~~F~~pd~VGGRfSvlSaVGLlPaal~G--iDi~~lL~GA~~md~ 345 (619)
...-+.++|+||+ +++|.+.|..+|+ .++++|.....||+++.- +.+.+ .|+++..+...++.+
T Consensus 75 -------A~rrGa~vv~vts-gG~L~~~a~~~~~-~~v~vp~~~~pR~al~~l-----~~l~~~~~~l~~~a~~l~~~a~ 140 (290)
T 1wiw_A 75 -------GEAAGMALLAETG-RARVVRVGFRPGV-EVHIPPSPLAPYRYLRFL-----LLATGREEVLRSVDEALLEERR 140 (290)
T ss_dssp -------TSCSTTC--CCCT-TCEEEEEESSTTC-SEECCCCTTHHHHHHHHH-----HHHTTCHHHHHHHHHHHHHHHT
T ss_pred -------HHHcCCeEEEECC-CChHHHHHhhCCC-CEEeCCCCCCCHHHHHHH-----HHhcCchhhHHHHHHHHHHHHH
Confidence 2234788999998 7799999999887 789999888888887766 33333 236666666666666
Q ss_pred HhcCC-CcCCCHHHHHHHHHHHHhcCCCCceEEEEechhchHhHHHHHHHHHHhhcCccccCCCCcccccceEeecCCCC
Q 007074 346 ANRTT-VLRNNPAALLALCWYWASDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGLTVYGNKGST 424 (619)
Q Consensus 346 ~~~~~-~l~~N~a~llAl~~~~~~~~~g~~~~vllpY~~~L~~f~~wlqQL~mESlGK~~~~dG~~v~~G~~~~g~~Gt~ 424 (619)
.+... +..+|||..||.-. . | +.-++. .+ .....+..|+|.+.| |+|.. ..++.
T Consensus 141 ~~~p~~~~~~NpAK~LA~~L---~---~-~~Pvi~-~~-~~~~~A~R~k~~l~e-nAk~~-----------a~~~~---- 195 (290)
T 1wiw_A 141 RLGPEVPVEENPAKFLAYTL---L---E-RLPLFY-SP-LFRPLEGAVQTLFAR-VAKSL-----------SLTPP---- 195 (290)
T ss_dssp TTSTTSCGGGCHHHHHHHHH---T---T-SEEEEE-CT-TCTHHHHHHHHHHHH-TTCCC-----------CBCCC----
T ss_pred hcCCccccccCHHHHHHHHH---h---C-CCcEEE-ec-CcHHHHHHHHHHHHH-hcCCC-----------ccccc----
Confidence 66533 34689999999732 1 3 233444 56 778889889998888 44442 21111
Q ss_pred ChhhH--HHhhhccCCc--eeeEEEeeccCCCCCCccccCCCCChHHHHHHhhccchhhcccCCcceeEEEeccCC-hhh
Q 007074 425 DQHAY--IQQLREGVHN--FFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANDRESVTVTVQEVT-PRS 499 (619)
Q Consensus 425 dQHS~--~Qll~qG~~~--~~~tFI~v~~~~~~~~~~~l~~g~t~~d~L~~~~~gt~~al~~ggrPs~tI~l~~l~-~~~ 499 (619)
--|-- .--+ +|+.+ ...-+|-+ .+ ... ..-+++-+...+.+.+.|..+.-+ -..
T Consensus 196 ~~Hne~~i~~~-~~p~~~~~~~~~v~l-~d---------------~~r----~~~~~~i~~~~~~~v~~v~~~g~s~L~~ 254 (290)
T 1wiw_A 196 PSALEFFLVGL-EARHEQGDPLAAVLL-GP---------------GEE----AALAKEILESRVDALAEVPATGANRLAQ 254 (290)
T ss_dssp SSHHHHHHHTT-SSCGGGGTTEEEEEE-SC---------------SHH----HHHHHHHHTTTSSEEEEECCCSSSHHHH
T ss_pred cccChhhhccc-cCccccccceEEEEe-cc---------------hhH----HHHHHHHHHhcCCceEEEeCCCCCHHHH
Confidence 11111 1001 22222 11111111 10 000 111222222344555555444322 245
Q ss_pred HHHHHHHHHHHHHHHHHhhCcCCCCCCchHHHHHH
Q 007074 500 VGALVALYERAVGIYASLVNINAYHQPGVEAGKKA 534 (619)
Q Consensus 500 LGaLialyE~av~~~g~L~gINpFDQPGVE~gK~~ 534 (619)
+=.|+++-.++.++.+.+.|+||.+-|=++..|+.
T Consensus 255 l~~Li~~~d~asvYLAl~~G~DP~~~~~I~~lK~~ 289 (290)
T 1wiw_A 255 VMALWYRMAWTAYYLALLYGVDPGDHGLLERLREV 289 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCSCCCSCC-----
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHhc
Confidence 67888899999999999999999999988888764
No 20
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=98.59 E-value=2.8e-07 Score=88.13 Aligned_cols=124 Identities=17% Similarity=0.163 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCC----CCCceEEEEe-C--------CChhH-
Q 007074 166 DAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPD----NPPLKIRFID-N--------TDPAG- 231 (619)
Q Consensus 166 ~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~----~~~~~i~Fvd-N--------~DP~~- 231 (619)
+.++.+++.+.+ -+.|+++|+|+|+...+.+..-|... ..++++.++. + -|+..
T Consensus 29 ~~~~~~~~~i~~------------a~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~a~~~d~~~~ 96 (196)
T 2yva_A 29 RAAMTLVQSLLN------------GNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHD 96 (196)
T ss_dssp HHHHHHHHHHHT------------TCCEEEEESTHHHHHHHHHHHHHHTCSSSCCCCCCEEESSCCHHHHHHHTTSTTGG
T ss_pred HHHHHHHHHHHc------------CCEEEEEeCchhhHHHHHHHHHHhccccccCCCCceEeecCchHHHHHHhcCCCHH
Confidence 456677777774 25799999999998888777755421 2345666653 1 13332
Q ss_pred --H-HHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecC-CchhhhhHHHhCCcceeec
Q 007074 232 --I-DHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQE-NSLLDNTVRIEGWLARFPM 307 (619)
Q Consensus 232 --i-~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~-~s~L~~~A~~~g~~~~F~~ 307 (619)
+ ..+...+++ +.++|++|.||.|.|++..++.+++. +.++|+||++ +++|.+.++...+ ++.+
T Consensus 97 ~~~~~~~~~~~~~---~DvvI~iS~SG~t~~~i~~~~~ak~~--------g~~vI~IT~~~~s~la~~~~~ad~--~l~~ 163 (196)
T 2yva_A 97 EVYAKQVRALGHA---GDVLLAISTRGNSRDIVKAVEAAVTR--------DMTIVALTGYDGGELAGLLGPQDV--EIRI 163 (196)
T ss_dssp GHHHHHHHHHCCT---TCEEEEECSSSCCHHHHHHHHHHHHT--------TCEEEEEECTTCHHHHTTCCTTSE--EEEC
T ss_pred HHHHHHHHhcCCC---CCEEEEEeCCCCCHHHHHHHHHHHHC--------CCEEEEEeCCCCchhhhcccCCCE--EEEe
Confidence 1 222355654 78999999999999999999999872 7889999994 7888887322233 6777
Q ss_pred cCCCCCc
Q 007074 308 FDWVGGR 314 (619)
Q Consensus 308 pd~VGGR 314 (619)
|..-.+|
T Consensus 164 ~~~~~~~ 170 (196)
T 2yva_A 164 PSHRSAR 170 (196)
T ss_dssp SCSCHHH
T ss_pred CCCChhH
Confidence 7654344
No 21
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=98.57 E-value=1.4e-07 Score=99.41 Aligned_cols=113 Identities=16% Similarity=0.095 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHH-HhhCcCCC
Q 007074 166 DAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQI-AQLGPELA 244 (619)
Q Consensus 166 ~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l-~~L~~~l~ 244 (619)
..+++|++.+.. .+.++|+++|+|+|+.....+...+.... ++++.+++ |......- ..++ +
T Consensus 29 ~~~~~~~~~~~~----------~~~~~I~i~G~G~S~~aa~~~~~~l~~~~-g~~~~~~~---~~~~~~~~~~~~~---~ 91 (344)
T 3fj1_A 29 QDVARVAAVLRL----------RDPSFVATVARGSSDHVCTYLSYAAELLL-GLPVASLG---PSVASVYDARLRL---D 91 (344)
T ss_dssp HHHHHHHHHHHH----------HCCSEEEEECCTHHHHHHHHHHHHHHHHH-CCCEEECC---THHHHTTCCCCCC---T
T ss_pred HHHHHHHHHHhh----------CCCCEEEEEEechHHHHHHHHHHHHHHHh-CCcEEEec---chHHhhhcccCCC---C
Confidence 456677777753 45789999999999988887777665422 24555542 22111111 1122 5
Q ss_pred cEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeecc
Q 007074 245 STLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMF 308 (619)
Q Consensus 245 ~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~p 308 (619)
++++|++|.||.|.||+..++.+++. +.++|+||. ++|+|.+.| .+ ++.++
T Consensus 92 ~dlvI~iS~SG~T~e~l~a~~~ak~~--------Ga~~iaIT~~~~S~La~~a---d~--~l~~~ 143 (344)
T 3fj1_A 92 RALCLAVSQSGKSPDIVAMTRNAGRD--------GALCVALTNDAASPLAGVS---AH--TIDIH 143 (344)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHT--------TCEEEEEESCTTSHHHHTS---SE--EEECC
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHC--------CCcEEEEECCCCChHHHhc---CE--eeecC
Confidence 89999999999999999999999872 789999997 578888877 33 56555
No 22
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=98.57 E-value=1.3e-07 Score=89.43 Aligned_cols=112 Identities=13% Similarity=0.166 Sum_probs=82.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcE
Q 007074 167 AVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAST 246 (619)
Q Consensus 167 ~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~T 246 (619)
.++++++.+.+ .+ +.|+++|+|+|+...+.+...|... +.++++++ |++.+...+..++ ++.
T Consensus 37 ~i~~~~~~i~~----------a~-~~I~i~G~G~S~~~a~~~~~~l~~~--g~~~~~~~--~~~~~~~~~~~~~---~~d 98 (183)
T 2xhz_A 37 NFTLACEKMFW----------CK-GKVVVMGMGASGHIGRKMAATFAST--GTPSFFVH--PGEAAHGDLGMVT---PQD 98 (183)
T ss_dssp HHHHHHHHHHT----------CS-SCEEEEECHHHHHHHHHHHHHHHTT--TCCEEECC--TTHHHHHTSTTCC---TTC
T ss_pred HHHHHHHHHHh----------CC-CeEEEEeecHHHHHHHHHHHHHHhc--CceEEEeC--chHHhhhhhccCC---CCC
Confidence 67778888873 11 3799999999999888877777543 24666664 3444443334455 389
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccC
Q 007074 247 LVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFD 309 (619)
Q Consensus 247 LvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd 309 (619)
++|++|+||.|.|+...++.+++ .+.++|+||+ .+++|.+.|+ .++.+|.
T Consensus 99 ~vI~iS~sG~t~~~~~~~~~ak~--------~g~~vi~IT~~~~s~la~~ad-----~~l~~~~ 149 (183)
T 2xhz_A 99 VVIAISNSGESSEITALIPVLKR--------LHVPLICITGRPESSMARAAD-----VHLCVKV 149 (183)
T ss_dssp EEEEECSSSCCHHHHHHHHHHHT--------TTCCEEEEESCTTSHHHHHSS-----EEEECCC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH--------CCCCEEEEECCCCChhHHhCC-----EEEEeCC
Confidence 99999999999999999999876 2678999998 4688888773 2566663
No 23
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=98.57 E-value=2.3e-07 Score=98.89 Aligned_cols=108 Identities=19% Similarity=0.158 Sum_probs=78.8
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHH
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKA 270 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~ 270 (619)
++|+++|+|+|+.....+...|.... ++++.++.. .+.+..-...+.+ -+++++|++|.||+|.||+..++.+++.
T Consensus 54 ~~I~i~G~GtS~~~a~~~~~~l~~~~-g~~v~~~~~--~~~~~~~~~~~~~-~~~dlvI~iS~SG~T~e~l~a~~~ak~~ 129 (384)
T 3c3j_A 54 LRIILTGAGTSAFIGDIIAPWLASHT-GKNFSAVPT--TDLVTNPMDYLNP-AHPLLLISFGRSGNSPESVAAVELANQF 129 (384)
T ss_dssp CEEEEECSTHHHHHHHHHHHHHHHHH-CSEEEECCH--HHHHHCHHHHCCT-TSCEEEEEEESSSCCHHHHHHHHHHHHH
T ss_pred CEEEEEEehHHHHHHHHHHHHHHHHh-CCcEEEecc--HHHHhChhhhhCC-CCCeEEEEEeCCcCCHHHHHHHHHHHhh
Confidence 78999999999999988888775421 246666532 3333334444532 1489999999999999999999999873
Q ss_pred HHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeecc
Q 007074 271 FREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMF 308 (619)
Q Consensus 271 l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~p 308 (619)
..+.++|+||. ++|+|.+.|+.++..-++.++
T Consensus 130 ------~~ga~~iaIT~~~~S~La~~ad~~~~~~~l~~~ 162 (384)
T 3c3j_A 130 ------VPECYHLPITCNEAGALYQNAINSDNAFALLMP 162 (384)
T ss_dssp ------CSSEEEEEEESCTTSHHHHHHHTCTTBCCEECC
T ss_pred ------CCCCCEEEEECCCCCHHHhhhccCCcEEEEEec
Confidence 01568999998 479999999866542346665
No 24
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=98.53 E-value=2.6e-07 Score=89.03 Aligned_cols=113 Identities=17% Similarity=0.254 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCc
Q 007074 166 DAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAS 245 (619)
Q Consensus 166 ~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~ 245 (619)
++++++++.+.+ .-+.|+++|+|+|+.-++.+...|... +++++++. |++.+...+..+++ +
T Consensus 32 ~~i~~~~~~i~~-----------a~~~I~i~G~G~S~~~A~~~~~~l~~~--g~~~~~~~--~~~~~~~~~~~~~~---~ 93 (201)
T 3fxa_A 32 EALVKTVEKIAE-----------CTGKIVVAGCGTSGVAAKKLVHSFNCI--ERPAVFLT--PSDAVHGTLGVLQK---E 93 (201)
T ss_dssp HHHHHHHHHHHH-----------CSSCEEEECCTHHHHHHHHHHHHHHHT--TCCEEECC--HHHHTTTGGGGCCT---T
T ss_pred HHHHHHHHHHHh-----------cCCcEEEEEecHHHHHHHHHHHHHHhc--CCcEEEeC--chHHHhhhhhcCCC---C
Confidence 467778888874 113799999999998888887777643 34666653 33333333445664 7
Q ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccC
Q 007074 246 TLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFD 309 (619)
Q Consensus 246 TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd 309 (619)
.++|++|.||.|.|+...++.+++. +.++|+||+ .+++|.+.| .+ ++.+|.
T Consensus 94 dvvI~iS~sG~t~~~~~~~~~ak~~--------g~~vi~IT~~~~s~l~~~a---d~--~l~~~~ 145 (201)
T 3fxa_A 94 DILILISKGGNTGELLNLIPACKTK--------GSTLIGVTENPDSVIAKEA---DI--FFPVSV 145 (201)
T ss_dssp CEEEEECSSSCCHHHHTTHHHHHHH--------TCEEEEEESCTTSHHHHHC---SE--EEECCC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHc--------CCeEEEEECCCCChhHHhC---CE--EEEcCC
Confidence 8999999999999999999998873 789999998 478888877 32 565554
No 25
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=98.52 E-value=2.9e-07 Score=97.05 Aligned_cols=118 Identities=23% Similarity=0.228 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCC
Q 007074 164 TLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPEL 243 (619)
Q Consensus 164 ~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l 243 (619)
..+.++++++.+.+ ...+.|+++|+|+|+.....+...+.... ++++.+.. +.+........++
T Consensus 38 ~~~~i~~~~~~i~~----------~~~~~I~i~G~G~S~~~a~~~~~~l~~~~-g~~~~~~~--~~e~~~~~~~~l~--- 101 (355)
T 2a3n_A 38 ARQKAEQVADEIYQ----------AGFSSLFFASVGGSLAPMMAINEFAKELT-TLPVYVEQ--AAELIHKGNKRLN--- 101 (355)
T ss_dssp THHHHHHHHHHHHH----------HCCSCEEEEECGGGHHHHHHHHHHHHHHC-CSCEEEEE--HHHHHHHCCTTCC---
T ss_pred hHHHHHHHHHHHHh----------CCCCEEEEEEccHHHHHHHHHHHHHHhhc-CCeEEEcC--cHHHHhhchhcCC---
Confidence 45678888888874 23578999999999998887777665421 24555443 2333222222234
Q ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccCC
Q 007074 244 ASTLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFDW 310 (619)
Q Consensus 244 ~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd~ 310 (619)
+++++|++|.||.|.||+..++.+++. +.++|+||+ .+|+|.+.|+ .++.++..
T Consensus 102 ~~dlvI~iS~SG~t~e~~~a~~~ak~~--------Ga~vi~IT~~~~S~La~~ad-----~~l~~~~~ 156 (355)
T 2a3n_A 102 KDSVVITLSKSGDTKESVAIAEWCKAQ--------GIRVVAITKNADSPLAQAAT-----WHIPMRHK 156 (355)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHT--------TCEEEEEESCTTSHHHHTCS-----EEEECCCS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC--------CCeEEEEECCCCChhhHhCC-----EEEEeCCC
Confidence 489999999999999999999999872 678999998 4788887773 35677654
No 26
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=98.49 E-value=3.2e-07 Score=90.46 Aligned_cols=94 Identities=17% Similarity=0.179 Sum_probs=70.7
Q ss_pred cceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHH
Q 007074 190 FTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQK 269 (619)
Q Consensus 190 ~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~ 269 (619)
-+.|+++|+|+|+.-.+.+...|... +.++++++ |.+.+...+..+++ +.++|++|.||.|.|++..++.+++
T Consensus 59 a~~I~i~G~G~S~~~A~~~~~~l~~l--g~~~~~~~--~~~~~~~~~~~~~~---~DlvI~iS~SG~t~~~i~~~~~ak~ 131 (220)
T 3etn_A 59 KGKLVTSGMGKAGQIAMNIATTFCST--GIPSVFLH--PSEAQHGDLGILQE---NDLLLLISNSGKTREIVELTQLAHN 131 (220)
T ss_dssp CCCEEEECSHHHHHHHHHHHHHHHHT--TCCEEECC--TTGGGBTGGGGCCT---TCEEEEECSSSCCHHHHHHHHHHHH
T ss_pred CCEEEEEEecHHHHHHHHHHHHHHhc--CCcEEEeC--CHHHHHhhhccCCC---CCEEEEEcCCCCCHHHHHHHHHHHh
Confidence 46899999999998887777766543 24666664 33333333455664 7899999999999999999999886
Q ss_pred HHHHhccccCCEEEEEec-CCchhhhhH
Q 007074 270 AFREAGLEFAKQGVAITQ-ENSLLDNTV 296 (619)
Q Consensus 270 ~l~~~g~~~~~h~VaVT~-~~s~L~~~A 296 (619)
. ..+.++|+||+ .+++|.+.|
T Consensus 132 ~------~~Ga~vI~IT~~~~s~La~~a 153 (220)
T 3etn_A 132 L------NPGLKFIVITGNPDSPLASES 153 (220)
T ss_dssp H------CTTCEEEEEESCTTSHHHHHS
T ss_pred c------CCCCeEEEEECCCCChhHHhC
Confidence 1 12788999998 478888877
No 27
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=98.47 E-value=9.4e-07 Score=94.91 Aligned_cols=162 Identities=18% Similarity=0.128 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCc
Q 007074 166 DAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAS 245 (619)
Q Consensus 166 ~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~ 245 (619)
..+.+|.+.+.. ++.+.|+++|+|+|+...+.+...|.... ++++..+...| .+..-.....+ -++
T Consensus 44 ~~~~~~~~~~~~----------~~~~~I~i~G~GtS~~aa~~~~~~l~~~~-g~~v~ai~~~~--~~~~~~~~~~~-~~~ 109 (393)
T 3odp_A 44 EKLKSFLDNFAK----------KPNAKIVITGAGSSAFVGNSVVSYLNAKE-NIKIEAIATTD--IVSHPFYYLKK-DEP 109 (393)
T ss_dssp HHHHHHHHHHHT----------STTCEEEEECSTHHHHHHHTTHHHHHHHS-SSEEEECCHHH--HTTCGGGTCCT-TSC
T ss_pred chHHHHHHHHHh----------CCCCEEEEEEechHHHHHHHHHHHHHHHh-CCCeEEeCcHH--HHhhhHHhcCC-CCC
Confidence 346667777763 34689999999999999988777776532 24555442111 10000111222 158
Q ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccC---CCC-Ccch-hhh
Q 007074 246 TLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFD---WVG-GRTS-EMS 319 (619)
Q Consensus 246 TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd---~VG-GRfS-vlS 319 (619)
+++|++|.||.|.||+..++.+++.. .+.++|+||. .+|+|.+.|+...+.-++.+|. .+| --++ ..+
T Consensus 110 dlvI~iS~SGeT~e~l~al~~ak~~~------~Ga~~iaIT~~~~S~La~~aD~~~~~~~i~~~~~~~E~~va~Tksft~ 183 (393)
T 3odp_A 110 TLLISCARSGNSPESTAAVTLAEKIV------DDISHLIITCNSEGKLALHAKRNYNSFLLLMPEESNDKGFAMTGSFST 183 (393)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHHC------SSEEEEEEESCTTSHHHHGGGSSSCEEEEECCGGGSCCSSSCSHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHhhc------CCCcEEEEECCCCCHHHHHhcCCCceEEEEcCCccccccccccHHHHH
Confidence 99999999999999999999998720 1578999998 4899999986321111455553 222 1122 222
Q ss_pred HhhHHHHHhcCCCHHHHHHHHHHHhHHh
Q 007074 320 AVGLLPAALQGIDVREMLAGASLMDEAN 347 (619)
Q Consensus 320 aVGLlPaal~GiDi~~lL~GA~~md~~~ 347 (619)
.+-.+-+.+...+.+++++..+.+.+..
T Consensus 184 ql~~l~ll~~~~~~~~~~~~l~~lp~~~ 211 (393)
T 3odp_A 184 MLLSCLLIFNLDKLESIGKQIESISMQG 211 (393)
T ss_dssp HHHHHHHTTCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 2211111122335677776666655544
No 28
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=98.45 E-value=1.6e-06 Score=82.73 Aligned_cols=107 Identities=19% Similarity=0.180 Sum_probs=74.9
Q ss_pred ceEEEEecccCchHHHHHHHHhcC-C---CCCceEEEEeCCChhHH--------------HHHHHhhCcCCCcEEEEEEc
Q 007074 191 TSILSVGIGGSALGPQFVAEALAP-D---NPPLKIRFIDNTDPAGI--------------DHQIAQLGPELASTLVVVIS 252 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~-~---~~~~~i~FvdN~DP~~i--------------~~~l~~L~~~l~~TLvIViS 252 (619)
+.|+++|+|+|+..++.+..-|.. + ..+++++++ +.|+..+ ......+++ +.++|++|
T Consensus 49 ~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~vI~iS 124 (198)
T 2xbl_A 49 GKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVAL-TTDTSILTAIGNDYGYEKLFSRQVQALGNE---GDVLIGYS 124 (198)
T ss_dssp CCEEEECSTHHHHHHHHHHHHHHSCSSSCCCCCCEEET-TCCHHHHHHHHHHHCGGGTTHHHHHHHCCT---TCEEEEEC
T ss_pred CEEEEEeCcHhhHHHHHHHHHHHhhhccCCCCCceEEe-cCChHHHHHhhccCCHHHHHHHHHHhhCCC---CCEEEEEe
Confidence 679999999999888777543321 1 123455544 2355421 122334553 78999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccCCCCCc
Q 007074 253 KSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFDWVGGR 314 (619)
Q Consensus 253 KSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd~VGGR 314 (619)
+||.|.||...++.+++. +.++|+||+ ++++|.+.| . .++.+|....+|
T Consensus 125 ~SG~t~~~~~~~~~ak~~--------g~~vI~IT~~~~s~L~~~a---d--~~l~~~~~~~~~ 174 (198)
T 2xbl_A 125 TSGKSPNILAAFREAKAK--------GMTCVGFTGNRGGEMRELC---D--LLLEVPSADTPK 174 (198)
T ss_dssp SSSCCHHHHHHHHHHHHT--------TCEEEEEECSCCCTHHHHC---S--EEEECSCSSHHH
T ss_pred CCCCCHHHHHHHHHHHHC--------CCeEEEEECCCCCcHHHhC---C--EEEEeCCCcHHH
Confidence 999999999999998872 688999998 478888887 3 367888765544
No 29
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=98.38 E-value=1.7e-06 Score=81.86 Aligned_cols=103 Identities=19% Similarity=0.234 Sum_probs=72.3
Q ss_pred ceEEEEecccCchHHHHHHHHhcC----CCCCceEEEEeCCChhHH-------------H-HHHHhhCcCCCcEEEEEEc
Q 007074 191 TSILSVGIGGSALGPQFVAEALAP----DNPPLKIRFIDNTDPAGI-------------D-HQIAQLGPELASTLVVVIS 252 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~----~~~~~~i~FvdN~DP~~i-------------~-~~l~~L~~~l~~TLvIViS 252 (619)
+.|+++|+|+|+..++.+..-|.. ...++++.++. .|+..+ . .....+++ +.++|++|
T Consensus 43 ~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~g~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~Dvvi~iS 118 (188)
T 1tk9_A 43 GKILICGNGGSAADAQHFAAELSGRYKKERKALAGIALT-TDTSALSAIGNDYGFEFVFSRQVEALGNE---KDVLIGIS 118 (188)
T ss_dssp CCEEEEESTHHHHHHHHHHHHHHSCSSSCCCCCCEEESS-CCHHHHHHHHHHTCGGGHHHHHHHHHCCT---TCEEEEEC
T ss_pred CEEEEEeCcHhHHHHHHHHHHHhhhhccCCCCCceEecc-CCchhHhhhhcCCCHHHHHHHHHHHhCCC---CCEEEEEe
Confidence 579999999999888777654322 11234555442 255321 1 23344553 89999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccCC
Q 007074 253 KSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFDW 310 (619)
Q Consensus 253 KSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd~ 310 (619)
.||.|.|+...++.+++. +.++|+||+ ++++|.+.| . .++.+|..
T Consensus 119 ~sG~t~~~~~~~~~ak~~--------g~~vi~iT~~~~s~L~~~a---d--~~l~~~~~ 164 (188)
T 1tk9_A 119 TSGKSPNVLEALKKAKEL--------NMLCLGLSGKGGGMMNKLC---D--HNLVVPSD 164 (188)
T ss_dssp SSSCCHHHHHHHHHHHHT--------TCEEEEEEEGGGTTHHHHC---S--EEEEESCS
T ss_pred CCCCCHHHHHHHHHHHHC--------CCEEEEEeCCCCcchHHcC---C--EEEEeCCC
Confidence 999999999999998872 678999998 468888876 3 36777764
No 30
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=98.35 E-value=1.8e-06 Score=91.90 Aligned_cols=95 Identities=18% Similarity=0.152 Sum_probs=69.9
Q ss_pred CCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHH
Q 007074 188 GRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEV 267 (619)
Q Consensus 188 ~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a 267 (619)
.+.+.|+++|+|+|+.....+...+.... ++++.++...+-. .. ...++ +++++|++|.||.|.||+..++.+
T Consensus 48 ~~a~~I~i~G~GtS~~aa~~~~~~~~~~~-g~~~~~~~~se~~--~~-~~~~~---~~dlvI~iS~SGeT~e~l~a~~~a 120 (366)
T 3knz_A 48 RGVTRIILTGSGTSYHGALTARTFMQRWC-ALPVDVCWPFMLD--DE-TLARS---GKALVVGISQGGGSLSTLAAMERA 120 (366)
T ss_dssp TTCCEEEEECCHHHHHHHHHHHHHHHHHH-TSCEEEECGGGCC--HH-HHHHS---CSEEEEEEESSSCCHHHHHHHHHH
T ss_pred cCCCEEEEEEechHHHHHHHHHHHHHHHH-CCCeEEEcchHHH--hh-ccCCC---CCCEEEEEcCCCCCHHHHHHHHHH
Confidence 45789999999999887777766665422 2455555332211 11 22344 389999999999999999999999
Q ss_pred HHHHHHhccccCCEEEEEec-CCchhhhhHH
Q 007074 268 QKAFREAGLEFAKQGVAITQ-ENSLLDNTVR 297 (619)
Q Consensus 268 ~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~ 297 (619)
++. +.++|+||. .+|+|.+.|+
T Consensus 121 k~~--------Ga~~IaIT~~~~S~La~~aD 143 (366)
T 3knz_A 121 RNV--------GHITASMAGVAPATIDRAAD 143 (366)
T ss_dssp HHT--------TCEEEEEESSSSCGGGGGCS
T ss_pred HHc--------CCCEEEEECCCCChhhhhcC
Confidence 872 788999998 5799988873
No 31
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=98.34 E-value=1e-06 Score=93.05 Aligned_cols=95 Identities=18% Similarity=0.149 Sum_probs=70.7
Q ss_pred CCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHH
Q 007074 188 GRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEV 267 (619)
Q Consensus 188 ~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a 267 (619)
.+.+.|+++|+|+|+.....+...+.... ++++.++...+- ......+.. +++++|++|.||.|.||+..++.+
T Consensus 32 ~~~~~I~i~G~G~S~~~a~~~~~~l~~~~-g~~~~~~~~se~---~~~~~~~~~--~~dlvI~iS~SG~T~e~l~a~~~a 105 (352)
T 3g68_A 32 TNLKKIIITGSGTSYHSGVQVQPYLQNLL-DIDVVKMYPFMI---TEDTFKFDN--ENTLVVGVSQGGSSYSTYNAMKLA 105 (352)
T ss_dssp SCCSEEEEECSHHHHHHHHHHHHHHHHHC-SSEEEEECGGGC---CGGGGSSCC--TTEEEEEEESSSCCHHHHHHHHHH
T ss_pred cCCCEEEEEEeehHHHHHHHHHHHHHHHh-CCcEEEEcchhh---hhcccCCCC--CCcEEEEEeCCCCCHHHHHHHHHH
Confidence 56789999999999988888877776532 356665533221 111112221 489999999999999999999999
Q ss_pred HHHHHHhccccCCEEEEEec-CCchhhhhH
Q 007074 268 QKAFREAGLEFAKQGVAITQ-ENSLLDNTV 296 (619)
Q Consensus 268 ~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A 296 (619)
++. +.++|+||. .+|+|.+.|
T Consensus 106 k~~--------ga~~iaIT~~~~S~La~~a 127 (352)
T 3g68_A 106 EDK--------GCKIASMAGCKNALIDEIS 127 (352)
T ss_dssp HHT--------TCEEEEEESSTTCGGGGGC
T ss_pred HHC--------CCCEEEEeCCCCChHHHhC
Confidence 873 789999998 589998887
No 32
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=98.33 E-value=2.2e-06 Score=83.43 Aligned_cols=110 Identities=21% Similarity=0.240 Sum_probs=77.6
Q ss_pred ceEEEEecccCchHHHHHHHHhcCC----CCCceEEEEeCCChhHH-------------HHHHH-hhCcCCCcEEEEEEc
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPD----NPPLKIRFIDNTDPAGI-------------DHQIA-QLGPELASTLVVVIS 252 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~----~~~~~i~FvdN~DP~~i-------------~~~l~-~L~~~l~~TLvIViS 252 (619)
..|+++|.|+|+.-++-+..-|.+. +.+++.+++. .|+..+ .+.+. .+.+ +.++|++|
T Consensus 47 ~~I~i~G~G~S~~~A~~~~~~l~~~~~~~r~g~~~~~~~-~d~~~~~a~~~d~~~~~~~~~~l~~~~~~---~Dvvi~iS 122 (201)
T 3trj_A 47 GKVLVCGNGSSGVIAQHFTSKLLNHFEMERPPLPAIALT-GDVATITAVGNHYGFSQIFAKQVAALGNE---DDILLVIT 122 (201)
T ss_dssp CCEEEEESTHHHHHHHHHHHHHHC-------CCCEEETT-SCHHHHHHHHHHTCGGGTTHHHHHHHCCT---TCEEEEEC
T ss_pred CEEEEEeCcHhHHHHHHHHHHhcCccCCCCCCCceEEcc-CChHHHHHhccCCCHHHHHHHHHHhhCCC---CCEEEEEe
Confidence 5699999999998777666555431 2245555553 344322 22222 3553 78999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccCCCCCc
Q 007074 253 KSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFDWVGGR 314 (619)
Q Consensus 253 KSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd~VGGR 314 (619)
.||.|.|++..++.+++. +.++|+||+ ++|+|.+.|....+ ++.+|..-.+|
T Consensus 123 ~SG~t~~~~~~~~~ak~~--------g~~vi~iT~~~~s~la~~a~~~d~--~l~~~~~~~~~ 175 (201)
T 3trj_A 123 TSGDSENILSAVEEAHDL--------EMKVIALTGGSGGALQNMYNTDDI--ELRVPSDNIAN 175 (201)
T ss_dssp SSSCCHHHHHHHHHHHHT--------TCEEEEEEETTCCGGGGTCCTTCE--EEEESCCCHHH
T ss_pred CCCCCHHHHHHHHHHHHC--------CCcEEEEECCCCCHHHHhhccCCE--EEEeCCCCchH
Confidence 999999999999999872 788999998 57899998866554 67888765444
No 33
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=98.31 E-value=8.8e-07 Score=84.02 Aligned_cols=99 Identities=20% Similarity=0.238 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCc
Q 007074 166 DAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAS 245 (619)
Q Consensus 166 ~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~ 245 (619)
++++++++.+.+ .++|+++|+|+|+...+.+...|... +.+++++. |+. ...++ ++
T Consensus 25 ~~i~~~~~~i~~------------a~~I~i~G~G~S~~~A~~~~~~l~~~--g~~~~~~~--~~~-----~~~~~---~~ 80 (186)
T 1m3s_A 25 EEADQLADHILS------------SHQIFTAGAGRSGLMAKSFAMRLMHM--GFNAHIVG--EIL-----TPPLA---EG 80 (186)
T ss_dssp HHHHHHHHHHHH------------CSCEEEECSHHHHHHHHHHHHHHHHT--TCCEEETT--STT-----CCCCC---TT
T ss_pred HHHHHHHHHHHc------------CCeEEEEecCHHHHHHHHHHHHHHhc--CCeEEEeC--ccc-----ccCCC---CC
Confidence 456777787763 35799999999998888877776543 24566653 221 23344 37
Q ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecC-CchhhhhH
Q 007074 246 TLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQE-NSLLDNTV 296 (619)
Q Consensus 246 TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~-~s~L~~~A 296 (619)
.++|++|.||.|.|++..++.+++ .+.++|+||++ +++|.+.|
T Consensus 81 d~vI~iS~sG~t~~~~~~~~~ak~--------~g~~vi~IT~~~~s~l~~~a 124 (186)
T 1m3s_A 81 DLVIIGSGSGETKSLIHTAAKAKS--------LHGIVAALTINPESSIGKQA 124 (186)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHH--------TTCEEEEEESCTTSHHHHHC
T ss_pred CEEEEEcCCCCcHHHHHHHHHHHH--------CCCEEEEEECCCCCchHHhC
Confidence 899999999999999999998887 27889999984 68887776
No 34
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=98.30 E-value=2.5e-06 Score=80.45 Aligned_cols=99 Identities=18% Similarity=0.231 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCC
Q 007074 165 LDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELA 244 (619)
Q Consensus 165 l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~ 244 (619)
.++++++++.+.+ .+.|+++|+|+|+.-.+.+...|... +.+++++. |+. ...++ +
T Consensus 27 ~~~i~~~~~~i~~------------a~~I~i~G~G~S~~~A~~~~~~l~~~--g~~~~~~~--~~~-----~~~~~---~ 82 (180)
T 1jeo_A 27 KNKLDSLIDRIIK------------AKKIFIFGVGRSGYIGRCFAMRLMHL--GFKSYFVG--ETT-----TPSYE---K 82 (180)
T ss_dssp HHHHHHHHHHHHH------------CSSEEEECCHHHHHHHHHHHHHHHHT--TCCEEETT--STT-----CCCCC---T
T ss_pred HHHHHHHHHHHHh------------CCEEEEEeecHHHHHHHHHHHHHHHc--CCeEEEeC--CCc-----cccCC---C
Confidence 3567788888874 35799999999998887777766543 24566653 221 23344 3
Q ss_pred cEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecC-CchhhhhH
Q 007074 245 STLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQE-NSLLDNTV 296 (619)
Q Consensus 245 ~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~-~s~L~~~A 296 (619)
+.++|++|.||.|.|+...++.+++ .+.++|+||++ ++ |.+.|
T Consensus 83 ~d~vi~iS~sG~t~~~~~~~~~ak~--------~g~~vi~IT~~~~s-l~~~a 126 (180)
T 1jeo_A 83 DDLLILISGSGRTESVLTVAKKAKN--------INNNIIAIVCECGN-VVEFA 126 (180)
T ss_dssp TCEEEEEESSSCCHHHHHHHHHHHT--------TCSCEEEEESSCCG-GGGGC
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHH--------CCCcEEEEeCCCCh-HHHhC
Confidence 7899999999999999999998876 26789999984 57 77776
No 35
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=98.28 E-value=3.7e-06 Score=86.72 Aligned_cols=108 Identities=18% Similarity=0.138 Sum_probs=77.7
Q ss_pred CcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHH
Q 007074 189 RFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQ 268 (619)
Q Consensus 189 ~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~ 268 (619)
+.++|+++|+|+|+...+.+...|.....++++..... .+. ++ +++++|++|.||.|.||+..++.++
T Consensus 36 ~~~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~~~~~~--~~~-------~~---~~dlvI~iS~SG~T~e~~~a~~~ak 103 (302)
T 1tzb_A 36 AMPRLYISGMGGSGVVADLIRDFSLTWNWEVEVIAVKD--YFL-------KA---RDGLLIAVSYSGNTIETLYTVEYAK 103 (302)
T ss_dssp CCSEEEEECCHHHHHHHHHHHHHHHHTTCSSEEEEECS--SCC-------CC---SSSEEEEECSSSCCHHHHHHHHHHH
T ss_pred CCCEEEEEEecHHHHHHHHHHHHHHhhcCCceEEEeCC--cCC-------CC---CCCEEEEEeCCCCCHHHHHHHHHHH
Confidence 35789999999999999988888753321345555432 222 23 4899999999999999999999998
Q ss_pred HHHHHhccccCCEEEEEecCCchhhhhHHHhCCcceeeccCCCCCcchhhhHhh
Q 007074 269 KAFREAGLEFAKQGVAITQENSLLDNTVRIEGWLARFPMFDWVGGRTSEMSAVG 322 (619)
Q Consensus 269 ~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~~~~F~~pd~VGGRfSvlSaVG 322 (619)
+. +.++|+||++. +|.+. ++ .+...|+....|+|.++.+-
T Consensus 104 ~~--------g~~~iaIT~~~-~La~~----~~-~l~~~~e~~a~~~s~~~~l~ 143 (302)
T 1tzb_A 104 RR--------RIPAVAITTGG-RLAQM----GV-PTVIVPKASAPRAALPQLLT 143 (302)
T ss_dssp HT--------TCCEEEEESST-TGGGS----SS-CEEECCCCSSGGGGHHHHHH
T ss_pred HC--------CCeEEEECCCc-hHHHC----Ce-eEEeCCCCCccHHHHHHHHH
Confidence 72 67899999865 55554 54 45567776656666655443
No 36
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=98.25 E-value=7.5e-06 Score=87.79 Aligned_cols=101 Identities=16% Similarity=0.118 Sum_probs=69.4
Q ss_pred cceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHH-HHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHH
Q 007074 190 FTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGI-DHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQ 268 (619)
Q Consensus 190 ~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i-~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~ 268 (619)
++.|+++|+|+|+...+.+...|..... ++-+|+..+++..+ ..-.....+ -+++++|++|.||.|.||+..++.++
T Consensus 56 ~~~I~i~G~GtS~~aa~~~~~~l~~~~g-~~~~~v~a~~~~~~~ase~~~~~~-~~~dl~i~iS~SG~T~e~~~al~~ak 133 (389)
T 3i0z_A 56 YIKVILTGAGTSAYVGDTLLPYFKEVYD-ERKWNFNAIATTDIVANPATYLKK-DVATVLVSFARSGNSPESLATVDLAK 133 (389)
T ss_dssp SEEEEEECSTHHHHHHHHHHHHHHHHSC-TTTEEEEECCHHHHTTCHHHHCCT-TSEEEEEEEESSSCCHHHHHHHHHHH
T ss_pred CCeEEEEEechHHHHHHHHHHHHHHHhC-CCCceEEeccccccccChHHhcCC-CCCcEEEEEeCCCCCHHHHHHHHHHH
Confidence 4799999999999999988877765322 33122332222221 111111222 15899999999999999999999998
Q ss_pred HHHHHhccccCCEEEEEec-CCchhhhhHHH
Q 007074 269 KAFREAGLEFAKQGVAITQ-ENSLLDNTVRI 298 (619)
Q Consensus 269 ~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~ 298 (619)
+.. .+.++|+||. .+|+|.+.|+.
T Consensus 134 ~~~------~g~~~i~IT~~~~s~la~~ad~ 158 (389)
T 3i0z_A 134 SLV------DELYQVTITCAADGKLALQAHG 158 (389)
T ss_dssp HHC------SSEEEEEEESCTTSHHHHTSSS
T ss_pred hhc------CCCcEEEEECCCCCHHHHHccc
Confidence 720 1578999998 47888888753
No 37
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=98.23 E-value=3.1e-06 Score=89.56 Aligned_cols=185 Identities=15% Similarity=0.103 Sum_probs=106.1
Q ss_pred cceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHH
Q 007074 190 FTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQK 269 (619)
Q Consensus 190 ~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~ 269 (619)
.++|+++|+|+|+...+.+...|.... ++++.+.. +..+......++ +++++|++|.||.|.||+..++.+++
T Consensus 52 ~~~I~i~G~G~S~~~a~~~~~~l~~~~-~~~~~~~~---~~e~~~~~~~~~---~~dlvI~iS~SG~T~e~l~a~~~ak~ 124 (368)
T 1moq_A 52 VEHIQILACGTSYNSGMVSRYWFESLA-GIPCDVEI---ASEFRYRKSAVR---RNSLMITLSQSGETADTLAGLRLSKE 124 (368)
T ss_dssp CCEEEEEECHHHHHHHHHHHHHHHHHS-CCCEEEEE---HHHHHTSCCCCC---TTEEEEEEESSSCCHHHHHHHHHHTT
T ss_pred CCEEEEEEchHHHHHHHHHHHHHHHHh-CCceEEEe---hhhHhhhcCCCC---CCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 468999999999999988887665432 23444432 222221122233 48999999999999999999999876
Q ss_pred HHHHhccccC-CEEEEEec-CCchhhhhHHHhCCcceeeccCC--CC-Ccc-hhhhHhhHH---HHHh---cCCC---HH
Q 007074 270 AFREAGLEFA-KQGVAITQ-ENSLLDNTVRIEGWLARFPMFDW--VG-GRT-SEMSAVGLL---PAAL---QGID---VR 334 (619)
Q Consensus 270 ~l~~~g~~~~-~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd~--VG-GRf-SvlSaVGLl---Paal---~GiD---i~ 334 (619)
.+ .++|+||+ .+|+|.+.|+ + ++.++.. .+ .-+ |..+.+-++ -+.+ .|++ ++
T Consensus 125 --------~G~a~viaIT~~~~S~La~~ad---~--~l~~~~~~e~~~a~t~s~~~~l~~l~~L~~~l~~~~~~~~~~~~ 191 (368)
T 1moq_A 125 --------LGYLGSLAICNVPGSSLVRESD---L--ALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEH 191 (368)
T ss_dssp --------TTCSEEEEEESSTTCHHHHHSS---E--EEECCCCCCCSSSCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred --------cCCCeEEEEECCCCChHHHhCC---E--EEEcCCCCeecccchhhHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 25 78999998 4788888773 3 5666531 11 122 333322222 1222 2543 45
Q ss_pred HHHHHHHHHhHHhcCCCcCCCHHHHHHHHHHHHhcCCCCceEEEEechhchHhHHHHHHHHHHhhcC
Q 007074 335 EMLAGASLMDEANRTTVLRNNPAALLALCWYWASDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLG 401 (619)
Q Consensus 335 ~lL~GA~~md~~~~~~~l~~N~a~llAl~~~~~~~~~g~~~~vllpY~~~L~~f~~wlqQL~mESlG 401 (619)
++++..+.+.+.+...--.++....+|- . ..+.+..+++-.....-.=-++--+ ++|-..
T Consensus 192 ~~~~~l~~l~~~~~~~l~~~~~~~~~a~--~----~~~~~~~~~lG~G~~~~~A~E~aLK-l~E~~~ 251 (368)
T 1moq_A 192 DIVHGLQALPSRIEQMLSQDKRIEALAE--D----FSDKHHALFLGRGDQYPIALEGALK-LKEISY 251 (368)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTHHHHHHH--H----HTTCSEEEEEECGGGHHHHHHHHHH-HHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHH--H----HhCCCcEEEEeCCCCHHHHHHHHHH-HHHHhc
Confidence 6766666666554432112344444433 1 1245556666655443333333333 466644
No 38
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=98.21 E-value=2.7e-06 Score=82.39 Aligned_cols=107 Identities=20% Similarity=0.169 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCc
Q 007074 166 DAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAS 245 (619)
Q Consensus 166 ~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~ 245 (619)
+.++++++.+.+ .+.|+++|+|+|++-.+-+..-|... +.+++++.. +. ...++ ++
T Consensus 35 ~~l~~~~~~i~~------------a~~I~i~G~G~S~~~A~~~~~~l~~~--g~~~~~~~~--~~-----~~~~~---~~ 90 (200)
T 1vim_A 35 ETVGEMIKLIDS------------ARSIFVIGAGRSGYIAKAFAMRLMHL--GYTVYVVGE--TV-----TPRIT---DQ 90 (200)
T ss_dssp HHHHHHHHHHHH------------SSCEEEECSHHHHHHHHHHHHHHHHT--TCCEEETTS--TT-----CCCCC---TT
T ss_pred HHHHHHHHHHhc------------CCEEEEEEecHHHHHHHHHHHHHHhc--CCeEEEeCC--cc-----ccCCC---CC
Confidence 456777888864 25799999999998777776666432 245666532 21 12344 37
Q ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccC
Q 007074 246 TLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFD 309 (619)
Q Consensus 246 TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd 309 (619)
.++|++|.||.|.|++..++.+++. +.++|+||+ .+++|.+.| .+ ++.+|.
T Consensus 91 DvvI~iS~SG~t~~~i~~~~~ak~~--------g~~vI~IT~~~~s~La~~a---d~--~l~~~~ 142 (200)
T 1vim_A 91 DVLVGISGSGETTSVVNISKKAKDI--------GSKLVAVTGKRDSSLAKMA---DV--VMVVKG 142 (200)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHH--------TCEEEEEESCTTSHHHHHC---SE--EEECCS
T ss_pred CEEEEEeCCCCcHHHHHHHHHHHHC--------CCeEEEEECCCCChHHHhC---CE--EEEECC
Confidence 8999999999999999999998873 788999998 468888777 32 555553
No 39
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=98.20 E-value=6.8e-06 Score=78.80 Aligned_cols=104 Identities=21% Similarity=0.218 Sum_probs=73.0
Q ss_pred ceEEEEecccCchHHHHHHHHh-cC---CCCCceEEEEeCC---------ChhH---HH-HHHHhhCcCCCcEEEEEEcC
Q 007074 191 TSILSVGIGGSALGPQFVAEAL-AP---DNPPLKIRFIDNT---------DPAG---ID-HQIAQLGPELASTLVVVISK 253 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL-~~---~~~~~~i~FvdN~---------DP~~---i~-~~l~~L~~~l~~TLvIViSK 253 (619)
+.|+++|.|+|+.-.+.+...| .. ...++++.++... |+.. +. .+...+++ +.++|++|.
T Consensus 46 ~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~DvvI~iS~ 122 (199)
T 1x92_A 46 GKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFSKQIRALGQP---GDVLLAIST 122 (199)
T ss_dssp CCEEEECSTHHHHHHHHHHHHHHTCSSSCCCCCCEEETTCCHHHHHHHHHHTCGGGTTHHHHHHHCCT---TCEEEEECS
T ss_pred CEEEEEcCchhHHHHHHHHHHHhcCcccCCCCCceEecCCChhHHHHhhcCccHHHHHHHHHHhCCCC---CCEEEEEeC
Confidence 5799999999998888777777 21 2234556655321 1111 11 22244654 789999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhh---HHHhCCcceeeccCC
Q 007074 254 SGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNT---VRIEGWLARFPMFDW 310 (619)
Q Consensus 254 SGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~---A~~~g~~~~F~~pd~ 310 (619)
||.|.|++..++.+++. +.++|+||+ ++++|.+. | .+ ++.+|..
T Consensus 123 SG~t~~~i~~~~~ak~~--------g~~vI~IT~~~~s~La~~~~~a---d~--~l~~~~~ 170 (199)
T 1x92_A 123 SGNSANVIQAIQAAHDR--------EMLVVALTGRDGGGMASLLLPE---DV--EIRVPSK 170 (199)
T ss_dssp SSCCHHHHHHHHHHHHT--------TCEEEEEECTTCHHHHHHCCTT---CE--EEECSCS
T ss_pred CCCCHHHHHHHHHHHHC--------CCEEEEEECCCCCcHHhccccC---CE--EEEeCCC
Confidence 99999999999998872 788999998 47888887 6 33 6777753
No 40
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=98.15 E-value=1.1e-05 Score=78.74 Aligned_cols=101 Identities=18% Similarity=0.200 Sum_probs=70.0
Q ss_pred ceEEEEecccCchHHHHHH-HH---hcCCCCCceEEEEeCCChhH-------------H-HHHHHhhCcCCCcEEEEEEc
Q 007074 191 TSILSVGIGGSALGPQFVA-EA---LAPDNPPLKIRFIDNTDPAG-------------I-DHQIAQLGPELASTLVVVIS 252 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~-~a---L~~~~~~~~i~FvdN~DP~~-------------i-~~~l~~L~~~l~~TLvIViS 252 (619)
+.|+++|.|+|+.-++.+. +. +.-...++++..+. |+.. + ......+++ +.++|++|
T Consensus 65 ~~I~i~G~G~S~~~A~~~a~~l~~~~~~~~~g~~~~~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~DvvI~iS 139 (212)
T 2i2w_A 65 GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAIS--DVSHISCVGNDFGFNDIFSRYVEAVGRE---GDVLLGIS 139 (212)
T ss_dssp CCEEEEESTHHHHHHHHHHHHHHHHHCTTSSSCSEEECC--CTTCGGGGSCCCSCSSHHHHHHHHHCCT---TCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHhhhcccCCCCeEEecC--ChHHhhHhhccCCHHHHHHHHHHhcCCC---CCEEEEEE
Confidence 5799999999987666544 21 11112234555554 3321 1 223345654 78999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeeccC
Q 007074 253 KSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMFD 309 (619)
Q Consensus 253 KSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd 309 (619)
.||.|.||+..++.+++. +..+|+||+ .+++|.+.| .+ ++.+|.
T Consensus 140 ~SG~t~~~i~~~~~ak~~--------G~~vIaIT~~~~s~La~~a---D~--~l~~~~ 184 (212)
T 2i2w_A 140 TSGNSANVIKAIAAAREK--------GMKVITLTGKDGGKMAGTA---DI--EIRVPH 184 (212)
T ss_dssp SSSCCHHHHHHHHHHHHH--------TCEEEEEEETTCGGGTTCS---SE--EEEECC
T ss_pred CCCCCHHHHHHHHHHHHC--------CCeEEEEECCCCCchHHhC---CE--EEEcCC
Confidence 999999999999999873 788999998 468888887 33 566765
No 41
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=98.14 E-value=7.7e-06 Score=86.95 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=65.1
Q ss_pred cceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHH
Q 007074 190 FTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQK 269 (619)
Q Consensus 190 ~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~ 269 (619)
.+.|+++|+|+|+-......+++.... ++++.... +.........++ +++++|++|.||.|.||+..++.+++
T Consensus 60 ~~~I~i~G~G~S~~a~~~a~~~~~~l~-~~~~~~~~---~~d~~~~~~~~~---~~dlvI~iS~SG~T~e~l~a~~~Ak~ 132 (375)
T 2zj3_A 60 CRRLILIACGTSYHAGVATRQVLEELT-ELPVMVEL---ASDFLDRNTPVF---RDDVCFFLSQSGETADTLMGLRYCKE 132 (375)
T ss_dssp CSEEEEEECHHHHHHHHHHHHHHHHHH-CSCEEEEE---HHHHHHTTCCCC---TTEEEEEEESSSCCHHHHHHHHHHHH
T ss_pred CCEEEEEEecHHHHHHHHHHHHHHHHh-CCCeEEEe---echHhhhccCCC---CCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 368999999999544443333332211 13333322 332221122233 48999999999999999999999987
Q ss_pred HHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeecc
Q 007074 270 AFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMF 308 (619)
Q Consensus 270 ~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~p 308 (619)
. +.++|+||+ .+|+|.+.|+ + ++.++
T Consensus 133 ~--------Ga~~iaIT~~~~S~La~~ad---~--~l~~~ 159 (375)
T 2zj3_A 133 R--------GALTVGITNTVGSSISRETD---C--GVHIN 159 (375)
T ss_dssp T--------TCEEEEEESCTTCHHHHHSS---E--EEECC
T ss_pred c--------CCcEEEEECCCCChHHHhCC---E--eeeec
Confidence 2 678999998 4788888773 3 55555
No 42
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=98.13 E-value=6.2e-06 Score=87.35 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=65.4
Q ss_pred cceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHH
Q 007074 190 FTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQK 269 (619)
Q Consensus 190 ~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~ 269 (619)
.+.|+++|+|+|+-......+++.... ++++.+.. +.........++ +++++|++|.||.|.||+..++.+++
T Consensus 50 ~~~I~i~G~G~S~~~~~~a~~~~~~l~-~~~~~~~~---~~e~~~~~~~~~---~~dlvI~iS~SG~T~e~l~a~~~Ak~ 122 (367)
T 2poc_A 50 CRRIIMIACGTSYHSCLATRSIFEELT-EIPVSVEL---ASDFLDRRSPVF---RDDTCVFVSQSGETADSILALQYCLE 122 (367)
T ss_dssp SSEEEEEECHHHHHHHHHHHHHHHHHH-CSCEEEEE---HHHHHHTTCCCC---TTEEEEEEESSSCCHHHHHHHHHHHH
T ss_pred CCEEEEEEecHHHHHHHHHHHHHHHHh-CCCeEEEe---hhhhHhhccCCC---CCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 368999999999544433333332211 13444332 222222112233 48999999999999999999999987
Q ss_pred HHHHhccccCCEEEEEec-CCchhhhhHHHhCCcceeecc
Q 007074 270 AFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWLARFPMF 308 (619)
Q Consensus 270 ~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~~~F~~p 308 (619)
. +.++|+||+ ++|+|.+.|+ + ++.++
T Consensus 123 ~--------Ga~~iaIT~~~~S~La~~ad---~--~l~~~ 149 (367)
T 2poc_A 123 R--------GALTVGIVNSVGSSMSRQTH---C--GVHIN 149 (367)
T ss_dssp T--------TCEEEEEESSTTSHHHHHSS---E--EEECC
T ss_pred C--------CCCEEEEECCCCChHHHhCC---E--EEEcC
Confidence 2 688999998 4788888773 3 56665
No 43
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=98.09 E-value=1.2e-05 Score=84.49 Aligned_cols=94 Identities=19% Similarity=0.100 Sum_probs=68.5
Q ss_pred CcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCc-EEEEEEcCCCCCHHHHHHHHHH
Q 007074 189 RFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAS-TLVVVISKSGGTPETRNGLLEV 267 (619)
Q Consensus 189 ~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~-TLvIViSKSGtT~ETl~~~~~a 267 (619)
+.++|+++|+|+|+...+.+...|.... ++++.++.. .+. ......++ ++ +++|++|.||.|.||+..++.+
T Consensus 51 ~~~~I~i~G~G~S~~~a~~~~~~l~~~~-g~~v~~~~~--~~~-~~~~~~~~---~~~dlvI~iS~SG~T~e~l~a~~~a 123 (342)
T 1j5x_A 51 LTDEVLFVGCGSSYNLALTISYYFERVL-KIRTKAIPA--GEV-AFQKIPDL---EERGLAFLFSRTGNTTEVLLANDVL 123 (342)
T ss_dssp -CCEEEEEESTHHHHHHHHHHHHHHHHH-CCEEEEEEH--HHH-HTTCSCCC---CSSEEEEEECSSSCCHHHHHHHHHH
T ss_pred CCCEEEEEEchHHHHHHHHHHHHHHHhh-CCeEEEECc--hHH-HhcCcccC---CCCeEEEEEcCCCCCHHHHHHHHHH
Confidence 4578999999999999988888776521 246665532 222 11111122 36 9999999999999999999999
Q ss_pred HHHHHHhccccCCEEEEEec-CCchhhhhHH
Q 007074 268 QKAFREAGLEFAKQGVAITQ-ENSLLDNTVR 297 (619)
Q Consensus 268 ~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A~ 297 (619)
++. +.++|+||+ ++|+|.+.|+
T Consensus 124 k~~--------Ga~vIaIT~~~~S~La~~ad 146 (342)
T 1j5x_A 124 KKR--------NHRTIGITIEEESRLAKESD 146 (342)
T ss_dssp HHT--------TEEEEEEESCTTSHHHHHSS
T ss_pred HHC--------CCCEEEEECCCCCHHHHhcC
Confidence 872 678999998 4788888773
No 44
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=98.05 E-value=5.2e-06 Score=88.35 Aligned_cols=169 Identities=15% Similarity=0.058 Sum_probs=98.1
Q ss_pred CcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHH
Q 007074 189 RFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQ 268 (619)
Q Consensus 189 ~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~ 268 (619)
+.+.|+++|+|+|+.....+...+.... ++++.+... ..+......++ +++++|++|.||.|.||+..++.++
T Consensus 53 ~a~~I~i~G~GtS~~aa~~~~~~~~~~~-g~~~~~~~~---se~~~~~~~~~---~~dlvI~iS~SG~T~e~l~al~~ak 125 (372)
T 3tbf_A 53 KTKHICIVACGTSYNAGMTAKYWIEKYA-KVPCSVEIA---SEIRYRDNVVV---DGSLFVSISQSGETADTLESLRKSK 125 (372)
T ss_dssp SCCEEEEEECHHHHHHHHHHHHHHHHHT-CCCEEEEEH---HHHTTSCCCCC---TTEEEEEEESSSCCHHHHHHHHHHT
T ss_pred cCCEEEEEEechHHHHHHHHHHHHHHHh-CCcEEEech---hHhhhcccCCC---CCCEEEEEeCCCCCHHHHHHHHHHH
Confidence 3578999999999888877777665432 245554422 22110001123 4899999999999999999999988
Q ss_pred HHHHHhccccC-CEEEEEec-CCchhhhhHHHhCCcceeeccC--CCC-C----cchhhhHhhHHHHHhc---C-CC---
Q 007074 269 KAFREAGLEFA-KQGVAITQ-ENSLLDNTVRIEGWLARFPMFD--WVG-G----RTSEMSAVGLLPAALQ---G-ID--- 332 (619)
Q Consensus 269 ~~l~~~g~~~~-~h~VaVT~-~~s~L~~~A~~~g~~~~F~~pd--~VG-G----RfSvlSaVGLlPaal~---G-iD--- 332 (619)
+. + .++|+||. .+|+|.+.|+ + ++.++. ..+ . +++-+...-++-+.+. | ++
T Consensus 126 ~~--------G~a~~iaIT~~~~S~La~~aD---~--~l~~~~g~E~~~a~Tks~t~ql~~l~lL~~~l~~~~g~~~~~~ 192 (372)
T 3tbf_A 126 KQ--------NYVGSMCICNVPNSSLVRESD---I--AFMTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQ 192 (372)
T ss_dssp TT--------TEEEEEEEESSSSSHHHHHSS---E--EEECCCCCCCBSSCSHHHHHHHHHHHHHHHHHHHHTTCSCHHH
T ss_pred Hc--------CCceEEEEcCCCCChHHHhCC---E--eeeecCCccccchhhHHHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 62 6 78999997 5788888773 3 566653 221 1 1122222222222222 4 22
Q ss_pred HHHHHHHHHHHhHHhcCCCcCCCHHHHHHHHHHHHhcCCCCceEEEEechh
Q 007074 333 VREMLAGASLMDEANRTTVLRNNPAALLALCWYWASDGVGSKDMVVLPYKD 383 (619)
Q Consensus 333 i~~lL~GA~~md~~~~~~~l~~N~a~llAl~~~~~~~~~g~~~~vllpY~~ 383 (619)
.++++++-+.+.+..... + +.... +.-+.......+..+++-...
T Consensus 193 ~~~~~~~l~~lp~~~~~~-l-~~~~~----~~~~a~~~~~~~~~~~lGrG~ 237 (372)
T 3tbf_A 193 IAKYTEELKNIRALVMGA-L-KLDTE----IDQISEYFSDKEHTIFLGRGL 237 (372)
T ss_dssp HHHHHHHHHTHHHHHHHH-H-TTHHH----HHHHHGGGTTCCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHH-H-hChHH----HHHHHHHHhccCCEEEEecCc
Confidence 567777766665544321 1 11111 112333344566677777544
No 45
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=97.90 E-value=2.6e-05 Score=81.12 Aligned_cols=90 Identities=23% Similarity=0.174 Sum_probs=65.1
Q ss_pred CcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCc--EEEEEEcCCCCCHHHHHHHHH
Q 007074 189 RFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAS--TLVVVISKSGGTPETRNGLLE 266 (619)
Q Consensus 189 ~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~--TLvIViSKSGtT~ETl~~~~~ 266 (619)
+.++|+++|+|+|+...+.+...|.... ++++. . .+.+. ......++ ++ +++|++|.||.|.||+..++.
T Consensus 30 ~~~~I~i~G~G~S~~~a~~~~~~l~~~~-g~~v~-~--~~se~-~~~~~~~~---~~~~dlvI~iS~SG~T~e~l~a~~~ 101 (325)
T 2e5f_A 30 LPNRILYLGCGSSHFLSKLLAMVTNMHG-GLGIA-L--PCSEF-LYSKETYP---IGEVELAVGISRSGETTEILLALEK 101 (325)
T ss_dssp CCSEEEEEESTHHHHHHHHHHHHHHHTT-SEEEE-E--EHHHH-HHHGGGSC---CCSCSEEEEECSSSCCHHHHHHHHT
T ss_pred CCCEEEEEEChHHHHHHHHHHHHHHHHh-CCCEE-E--echHH-hhcCcccC---CCCCeEEEEEeCCCCCHHHHHHHHH
Confidence 4578999999999999988888876532 23444 2 12222 21222344 37 999999999999999988887
Q ss_pred HHHHHHHhccccCCEEEEEecCCchhhhhHH
Q 007074 267 VQKAFREAGLEFAKQGVAITQENSLLDNTVR 297 (619)
Q Consensus 267 a~~~l~~~g~~~~~h~VaVT~~~s~L~~~A~ 297 (619)
++ .++|+||+.+|+|.+.|+
T Consensus 102 ak-----------a~viaIT~~~S~La~~ad 121 (325)
T 2e5f_A 102 IN-----------VKKLGITTRESSLTRMCD 121 (325)
T ss_dssp CC-----------SCEEEEESSSCHHHHHSS
T ss_pred hC-----------CCEEEEECCCCHHHHhcC
Confidence 64 568999976788877773
No 46
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=97.79 E-value=3.2e-05 Score=87.26 Aligned_cols=93 Identities=16% Similarity=0.103 Sum_probs=67.2
Q ss_pred cceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHH
Q 007074 190 FTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQK 269 (619)
Q Consensus 190 ~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~ 269 (619)
.+.|+++|+|+|+.....+...+.... ++++.++. +..+......++ +++++|++|.||.|.||+..++.+++
T Consensus 292 ~~~I~i~G~G~S~~~a~~~~~~~~~~~-~~~~~~~~---~~e~~~~~~~~~---~~dlvI~iS~SG~T~e~l~a~~~ak~ 364 (608)
T 2bpl_A 292 VEHIQILACGTSYNSGMVSRYWFESLA-GIPCDVEI---ASEFRYRKSAVR---RNSLMITLSQSGETADTLAGLRLSKE 364 (608)
T ss_dssp CCEEEEEECHHHHHHHHHHHHHHHHHS-CCCEEEEE---HHHHTTSCCCCC---TTEEEEEEESSSCCHHHHHHHHHHHH
T ss_pred CCEEEEEEehHHHHHHHHHHHHHHHHh-CCCEEEEe---hhHhhccCCCCC---CCCEEEEEeCCcCCHHHHHHHHHHHH
Confidence 468999999999998877777665432 24555542 222111011133 48999999999999999999999987
Q ss_pred HHHHhccccC-CEEEEEec-CCchhhhhHH
Q 007074 270 AFREAGLEFA-KQGVAITQ-ENSLLDNTVR 297 (619)
Q Consensus 270 ~l~~~g~~~~-~h~VaVT~-~~s~L~~~A~ 297 (619)
. + .++|+||. .+|+|.+.|+
T Consensus 365 ~--------G~a~~IaIT~~~~S~La~~ad 386 (608)
T 2bpl_A 365 L--------GYLGSLAICNVPGSSLVRESD 386 (608)
T ss_dssp T--------TCSEEEEEESSTTCHHHHHSS
T ss_pred c--------CCCeEEEEECCCCCHHHHhcC
Confidence 2 6 78999998 4788888874
No 47
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=97.58 E-value=0.00098 Score=68.90 Aligned_cols=108 Identities=18% Similarity=0.210 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHH-HHHHHhcCCC--CCceEEEEeC------------CC-h
Q 007074 166 DAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQ-FVAEALAPDN--PPLKIRFIDN------------TD-P 229 (619)
Q Consensus 166 ~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~-~v~~aL~~~~--~~~~i~FvdN------------~D-P 229 (619)
+.++.+++.+++| ..|+++|.|+|+.-.. ...+.+.... ...-..++.. .| +
T Consensus 59 ~~i~~i~~~l~~a------------~rI~~~G~G~S~~lA~~~a~~~~~~~g~~~~~~~~l~~~g~~a~~~a~e~~ed~~ 126 (306)
T 1nri_A 59 LAVEQIVQAFQQG------------GRLIYIGAGTSGRLGVLDASECPPTFGVSTEMVKGIIAGGECAIRHPVEGAEDNT 126 (306)
T ss_dssp HHHHHHHHHHHTT------------CCEEEEESHHHHHHHHHHHHHHHHHHCCCTTSEEEEETTCTHHHHSCCTTGGGCT
T ss_pred HHHHHHHHHHHcC------------CEEEEEeccHhHHHHHHHHHhcccccCCCHHHHHHHHhcchHHHhhhhhcccCcH
Confidence 5666777777641 4699999999976663 2333331110 1111111211 11 2
Q ss_pred hHHHHHHH--hhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-CCchhhhhH
Q 007074 230 AGIDHQIA--QLGPELASTLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-ENSLLDNTV 296 (619)
Q Consensus 230 ~~i~~~l~--~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-~~s~L~~~A 296 (619)
......+. .+++ +.++|++|.||.|.|++..++.+++. +..+|+||+ ++|+|.+.|
T Consensus 127 ~~~~~~l~~~~l~~---~DvvI~IS~SG~T~~vi~al~~Ak~~--------Ga~~IaIT~~~~S~La~~A 185 (306)
T 1nri_A 127 KAVLNDLQSIHFSK---NDVLVGIAASGRTPYVIAGLQYAKSL--------GALTISIASNPKSEMAEIA 185 (306)
T ss_dssp THHHHHHHHTTCCT---TSEEEEECTTSCCHHHHHHHHHHHHH--------TCEEEEEESSTTCHHHHHS
T ss_pred HHHHHHHHhcCCCC---CCEEEEEECCCCCHHHHHHHHHHHHC--------CCEEEEEECCCCChHHHhC
Confidence 11122332 3543 78899999999999999999999873 788999998 468888776
No 48
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=97.41 E-value=0.00018 Score=71.36 Aligned_cols=45 Identities=20% Similarity=0.244 Sum_probs=38.5
Q ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecC-Cc-----------hhhhhH
Q 007074 244 ASTLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQE-NS-----------LLDNTV 296 (619)
Q Consensus 244 ~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~-~s-----------~L~~~A 296 (619)
++.++|++|.||.|.|++..++.+++. +..+|+||+. .+ +|.+.|
T Consensus 108 ~~Dv~I~iS~SG~t~~~i~~~~~Ak~~--------G~~vI~IT~~~~s~~~~~~~~~g~~La~~a 164 (243)
T 3cvj_A 108 NKDVIMIISNSGRNTVPVEMAIESRNI--------GAKVIAMTSMKHSQKVTSRHKSGKKLYEYA 164 (243)
T ss_dssp TTCEEEEECSSCCSHHHHHHHHHHHHH--------TCEEEEEECHHHHHHSCCCSTTSCCGGGGC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC--------CCEEEEEeCCcccccccccCCCcCcHHHhC
Confidence 378999999999999999999999873 7889999984 34 777776
No 49
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=88.06 E-value=4.3 Score=38.55 Aligned_cols=104 Identities=13% Similarity=0.015 Sum_probs=65.3
Q ss_pred eEEEEecccCchHHHHHHHHhcCCCCCceEEEE-eCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHH
Q 007074 192 SILSVGIGGSALGPQFVAEALAPDNPPLKIRFI-DNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKA 270 (619)
Q Consensus 192 ~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~Fv-dN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~ 270 (619)
.|-+.|.|-|..-..- ++....+-..+.-+ ++. .+.| .=.|+++|.||...++...++.++++
T Consensus 40 ~IyvfG~Ghs~~~~~e---~~~~~e~l~~~~~~~~~~----------~i~~---~D~vii~S~Sg~n~~~ie~A~~ake~ 103 (170)
T 3jx9_A 40 KVYLDAYGEFEGLYPM---LSDGPDQMKRVTKIKDHK----------TLHA---VDRVLIFTPDTERSDLLASLARYDAW 103 (170)
T ss_dssp CEEEEECGGGGGGTHH---HHTSTTCCTTEEECCTTC----------CCCT---TCEEEEEESCSCCHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHH---HHcccCCccchhhhhhcC----------CCCC---CCEEEEEeCCCCCHHHHHHHHHHHHC
Confidence 4889999998653332 33222111112111 211 3554 44688899999999999999999884
Q ss_pred HHHhccccCCEEEEEec-C--C---chhhhhHHHhCCc-ceeeccCCCCCcchhhhHhhH
Q 007074 271 FREAGLEFAKQGVAITQ-E--N---SLLDNTVRIEGWL-ARFPMFDWVGGRTSEMSAVGL 323 (619)
Q Consensus 271 l~~~g~~~~~h~VaVT~-~--~---s~L~~~A~~~g~~-~~F~~pd~VGGRfSvlSaVGL 323 (619)
+..+|+||+ . . ..|..++ ++.. ..+|.++ |+|+...|.+.-
T Consensus 104 --------G~~vIaITs~~~~~~~~~~L~d~a--n~~p~gll~~e~--g~r~g~~Sti~~ 151 (170)
T 3jx9_A 104 --------HTPYSIITLGDVTETLERSIAPLA--LKFDKGLLPAED--GSRHGLPSLALG 151 (170)
T ss_dssp --------TCCEEEEESSCCCTTGGGSSSCEE--CCCCSCSEECTT--SCEECCCHHHHH
T ss_pred --------CCcEEEEeCcchhccccCcHHHHH--hCCCCCceECCC--CCEechhHHHHH
Confidence 778999998 3 1 2366666 2221 2455555 789988777654
No 50
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=79.55 E-value=2.2 Score=33.97 Aligned_cols=44 Identities=23% Similarity=0.625 Sum_probs=35.9
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDR 591 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (619)
...+|+.+|.+.. .++|+.|||+.+|.+ -.+|.++|..|...+-
T Consensus 11 ~~~~IL~~L~~~~-----~~~s~~eLA~~lgls--r~tv~~~l~~L~~~G~ 54 (67)
T 2heo_A 11 LEQKILQVLSDDG-----GPVAIFQLVKKCQVP--KKTLNQVLYRLKKEDR 54 (67)
T ss_dssp HHHHHHHHHHHHC-----SCEEHHHHHHHHCSC--HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcC-----CCcCHHHHHHHHCcC--HHHHHHHHHHHHHCCc
Confidence 4568999997642 589999999999994 6889999999988643
No 51
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=74.55 E-value=11 Score=31.40 Aligned_cols=51 Identities=22% Similarity=0.376 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEeec
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAEG 597 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (619)
.+.+|+++|.+.. +++.+|+.|||+++|.+. -+|.+.|..|...+. +...|
T Consensus 11 ~~~~IL~~L~~~~---pg~~~t~~eLA~~Lgvsr--~tV~~~L~~Le~~G~-I~~~g 61 (81)
T 1qbj_A 11 QEQRILKFLEELG---EGKATTAHDLSGKLGTPK--KEINRVLYSLAKKGK-LQKEA 61 (81)
T ss_dssp HHHHHHHHHHHHC---TTCCBCHHHHHHHHTCCH--HHHHHHHHHHHHTTS-EEEES
T ss_pred HHHHHHHHHHHcC---CCCCcCHHHHHHHHCcCH--HHHHHHHHHHHHCCC-EEecC
Confidence 4678899998764 677899999999999854 478999999987543 33344
No 52
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=73.41 E-value=2.8 Score=36.99 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=33.6
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCC--chhhHHHHHHHHHhcC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTP--EDIEMIYKIIAHMAAN 589 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 589 (619)
...+|.++|.+ +++|+.|||+.+|.. ..-|.||.-|.|++--
T Consensus 12 ~Re~Ii~lL~~-------~plta~ei~~~l~i~~~~~ke~Vy~hLeHIaks 55 (105)
T 2gmg_A 12 RREKIIELLLE-------GDYSPSELARILDMRGKGSKKVILEDLKVISKI 55 (105)
T ss_dssp HHHHHHHHTTT-------SCBCTTHHHHSSCCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-------CCCCHHHHHHHhCCCCCChHHHHHHHHHHHHHH
Confidence 46789999974 599999999999993 2234499999999864
No 53
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=70.59 E-value=7.8 Score=32.26 Aligned_cols=53 Identities=11% Similarity=0.127 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhh-HHHHHHHHHhcCCCceEeecCCCCC
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIE-MIYKIIAHMAANDRALIAEGSCGSP 602 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (619)
..+.+|+.+|+... +.|+.+||+.+|. ..+ +|=..|..|... |++...+.+.|
T Consensus 11 ~~~~~IL~~Lk~~g------~~ta~eiA~~Lgi--t~~~aVr~hL~~Le~e--GlV~~~~~gRP 64 (79)
T 1xmk_A 11 EIKEKICDYLFNVS------DSSALNLAKNIGL--TKARDINAVLIDMERQ--GDVYRQGTTPP 64 (79)
T ss_dssp HHHHHHHHHHHHTC------CEEHHHHHHHHCG--GGHHHHHHHHHHHHHT--TSEEEECSSSC
T ss_pred hHHHHHHHHHHHcC------CcCHHHHHHHcCC--CcHHHHHHHHHHHHHC--CCEEecCCCCC
Confidence 56789999998863 8999999999998 566 889999999875 44544455666
No 54
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=70.18 E-value=37 Score=34.14 Aligned_cols=115 Identities=7% Similarity=0.019 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCC--------------
Q 007074 163 TTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTD-------------- 228 (619)
Q Consensus 163 ~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~D-------------- 228 (619)
+.++.|..+++-+.......... .+.+-|||+|-|- .--.....+..+... .++.|-....
T Consensus 12 ~~~~~~~~i~~~l~~~~~p~~~~--~~~D~IVVLG~~~-~~Rl~~A~~L~~~g~--~~lIvSGG~g~~t~~~~~~v~~~~ 86 (266)
T 3ca8_A 12 ATIDAINVIGQWLAQDDFSGEVP--YQADCVILAGNAV-MPTIDAACKIARDQQ--IPLLISGGIGHSTTFLYSAIAQHP 86 (266)
T ss_dssp HHHHHHHHHHHHHHCCSTTTTCC--CCCSEEEEESCCC-HHHHHHHHHHHHHHT--CCEEEECCSSTTHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHhccCCCCCC--CCCCEEEECCCCc-hHHHHHHHHHHHcCC--CcEEEECCCCCcccchhhhhcccc
Confidence 34566666666666544433232 3568888887442 111122222222211 1455442222
Q ss_pred ------------hhHHHHHHHhh-CcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecC
Q 007074 229 ------------PAGIDHQIAQL-GPELASTLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQE 288 (619)
Q Consensus 229 ------------P~~i~~~l~~L-~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~ 288 (619)
.+.+.+.+... +- ...-+++=.+|-+|.| |+...++++++.|.. .++++.||++
T Consensus 87 ~y~~l~~~~~sEA~~m~~~l~~~~GV--p~~~IllE~~S~nT~E---Na~~s~~ll~~~g~~-~~~iiLVTs~ 153 (266)
T 3ca8_A 87 HYNTIRTTGRAEATILADIAHQFWHI--PHEKIWIEDQSTNCGE---NARFSIALLNQAVER-VHTAIVVQDP 153 (266)
T ss_dssp TGGGSCCTTSCHHHHHHHHHHHTTCC--CGGGEEEECCCCSHHH---HHHHHHHHHHTCSSC-CSCEEEECCT
T ss_pred ccccccCCCCCHHHHHHHHHHHhcCC--CHHHEEeCCCCccHHH---HHHHHHHHHHhcCCC-CCeEEEECCh
Confidence 13456666543 32 1345678889999765 667777778776652 4689999984
No 55
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=69.32 E-value=3.7 Score=34.60 Aligned_cols=54 Identities=9% Similarity=0.148 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEeecCCCCCc
Q 007074 539 LALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAEGSCGSPR 603 (619)
Q Consensus 539 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (619)
-....+|+.+|.+. ..|+.|||+++|. .-.+|.+.|..|... |++...+..+|.
T Consensus 16 ~~~~~~IL~lL~~~-------g~sa~eLAk~Lgi--Sk~aVr~~L~~Le~e--G~I~~~~~~PP~ 69 (82)
T 1oyi_A 16 AEIVCEAIKTIGIE-------GATAAQLTRQLNM--EKREVNKALYDLQRS--AMVYSSDDIPPR 69 (82)
T ss_dssp HHHHHHHHHHHSSS-------TEEHHHHHHHSSS--CHHHHHHHHHHHHHH--TSSEECSSSSCE
T ss_pred HHHHHHHHHHHHHc-------CCCHHHHHHHHCc--CHHHHHHHHHHHHHC--CCEEeCCCCCCc
Confidence 34566888899852 3999999999999 447899999999765 667666666664
No 56
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=67.89 E-value=15 Score=29.51 Aligned_cols=41 Identities=15% Similarity=0.085 Sum_probs=33.8
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+.+|+.+|.+. .+.|+.|||+.+|. ...+|.+.|..|...+
T Consensus 2 r~~Il~~L~~~------~~~s~~eLa~~lgv--s~~tv~r~L~~L~~~G 42 (81)
T 2htj_A 2 KNEILEFLNRH------NGGKTAEIAEALAV--TDYQARYYLLLLEKAG 42 (81)
T ss_dssp HHHHHHHHHHS------CCCCHHHHHHHHTS--CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHc------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 45788888764 37999999999998 5678999999998763
No 57
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=67.48 E-value=6.3 Score=32.29 Aligned_cols=44 Identities=20% Similarity=0.384 Sum_probs=35.4
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+.+|+.+|.+.. +++.+|+.|||+++|.+. -+|.+.|..|-..+
T Consensus 16 ~~~IL~~L~~~~---~~~~~t~~eLA~~Lgvs~--~tV~~~L~~L~~~G 59 (77)
T 1qgp_A 16 EQRILKFLEELG---EGKATTAHDLSGKLGTPK--KEINRVLYSLAKKG 59 (77)
T ss_dssp HHHHHHHHHHHC---SSSCEEHHHHHHHHCCCH--HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcC---CCCCcCHHHHHHHHCcCH--HHHHHHHHHHHHCC
Confidence 478888898864 356899999999999843 58999999998653
No 58
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=65.86 E-value=5.9 Score=33.17 Aligned_cols=42 Identities=26% Similarity=0.656 Sum_probs=30.8
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAN 589 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (619)
+.++|+++|+++. +|++..+||+++|.+. -.|=+.|.-|-..
T Consensus 20 ~eekVLe~LkeaG-----~PlkageIae~~GvdK--KeVdKaik~LKkE 61 (80)
T 2lnb_A 20 LEQRILQVLTEAG-----SPVKLAQLVKECQAPK--RELNQVLYRMKKE 61 (80)
T ss_dssp HHHHHHHHHHHHT-----SCEEHHHHHHHHTSCH--HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcC-----CCCCHHHHHHHHCCCH--HHHHHHHHHHHHc
Confidence 4579999999975 7999999999999942 2344445555443
No 59
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=63.08 E-value=14 Score=39.97 Aligned_cols=74 Identities=27% Similarity=0.399 Sum_probs=50.3
Q ss_pred eEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHHHHH
Q 007074 192 SILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQKAF 271 (619)
Q Consensus 192 ~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~~~l 271 (619)
+||++|-|- .|.. +.+.|.... -++..+|. ||+.+.++-++++ +.++--.++-++++
T Consensus 5 ~iiI~G~G~--vG~~-la~~L~~~~--~~v~vId~-d~~~~~~~~~~~~-------~~~i~Gd~~~~~~L---------- 61 (461)
T 4g65_A 5 KIIILGAGQ--VGGT-LAENLVGEN--NDITIVDK-DGDRLRELQDKYD-------LRVVNGHASHPDVL---------- 61 (461)
T ss_dssp EEEEECCSH--HHHH-HHHHTCSTT--EEEEEEES-CHHHHHHHHHHSS-------CEEEESCTTCHHHH----------
T ss_pred EEEEECCCH--HHHH-HHHHHHHCC--CCEEEEEC-CHHHHHHHHHhcC-------cEEEEEcCCCHHHH----------
Confidence 589999883 3433 445565442 47888887 8998888777775 23455678888774
Q ss_pred HHhccccCCEEEEEecC
Q 007074 272 REAGLEFAKQGVAITQE 288 (619)
Q Consensus 272 ~~~g~~~~~h~VaVT~~ 288 (619)
+++|.+.++-+||+|+.
T Consensus 62 ~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 62 HEAGAQDADMLVAVTNT 78 (461)
T ss_dssp HHHTTTTCSEEEECCSC
T ss_pred HhcCCCcCCEEEEEcCC
Confidence 44566667788999974
No 60
>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*
Probab=62.84 E-value=6 Score=31.24 Aligned_cols=47 Identities=21% Similarity=0.356 Sum_probs=38.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCch-hhHHHHHHH
Q 007074 525 QPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPED-IEMIYKIIA 584 (619)
Q Consensus 525 QPGVE~gK~~a~~il~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 584 (619)
-||| |++..+.+|+..+.+.++. ..|.+||++.+|. .. .+.||..+.
T Consensus 9 IpGI--G~kr~~~LL~~Fgs~~~i~----------~As~eeL~~vig~-~~~A~~I~~~l~ 56 (63)
T 2a1j_A 9 MPGV--NAKNCRSLMHHVKNIAELA----------ALSQDELTSILGN-AANAKQLYDFIH 56 (63)
T ss_dssp STTC--CHHHHHHHHHHCSSHHHHH----------TCCHHHHHHHHSC-HHHHHHHHHHHH
T ss_pred CCCC--CHHHHHHHHHHcCCHHHHH----------HCCHHHHHHHcCc-hHHHHHHHHHHh
Confidence 4787 8888899999999888876 3479999999985 55 899988764
No 61
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=59.21 E-value=13 Score=29.92 Aligned_cols=45 Identities=13% Similarity=0.375 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHc-----CCCchhhHHHHHHHHHhcCC
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERC-----HTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 590 (619)
.-+..|+.+|.+.. +.++|++||++.+ +. ..-+||..|..|...+
T Consensus 17 ~~r~~IL~~l~~~~----~~~~s~~el~~~l~~~~~~i--s~~TVyR~L~~L~~~G 66 (83)
T 2fu4_A 17 LPRLKILEVLQEPD----NHHVSAEDLYKRLIDMGEEI--GLATVYRVLNQFDDAG 66 (83)
T ss_dssp HHHHHHHHHHTSGG----GSSBCHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCC----CCCCCHHHHHHHHHHhCCCC--CHhhHHHHHHHHHHCC
Confidence 34567888887642 1489999999999 54 6789999999999875
No 62
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=58.21 E-value=8.5 Score=39.91 Aligned_cols=46 Identities=20% Similarity=0.336 Sum_probs=35.1
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHcC--CCchhhHHHHHHHHHhcCC
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERCH--TPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 590 (619)
-.|++.|.+.. .|+.+.|++|||+++| .|+....+..+||+|++.+
T Consensus 44 Lglfd~L~~~~--gp~~~~t~~eLA~~~~~~~~~~~~~l~rlLr~L~~~g 91 (368)
T 3reo_A 44 LDVLEIMAKSV--PPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYS 91 (368)
T ss_dssp TTHHHHHHHHC--CTTCCBCHHHHHTTSSCCCTTHHHHHHHHHHHHHHTT
T ss_pred CCchhHHhhcC--CCCCCcCHHHHHHhcCcCCCcchhhHHHHHHHHHhCC
Confidence 36888887731 0346899999999997 3455668999999999973
No 63
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=57.56 E-value=24 Score=29.06 Aligned_cols=61 Identities=10% Similarity=0.184 Sum_probs=40.4
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEeecCCCCCcc
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAEGSCGSPRS 604 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (619)
+++|+++|++......+.+.|+.|||+++|. +..+|-.-|..|...+-=...-|..+.|..
T Consensus 6 ~~~IL~~I~~~i~~~~g~~psv~EIa~~lgv--S~~TVrr~L~~Le~kG~I~R~~ggr~~~~~ 66 (77)
T 2jt1_A 6 VTKIISIVQERQNMDDGAPVKTRDIADAAGL--SIYQVRLYLEQLHDVGVLEKVNAGKGVPGL 66 (77)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEHHHHHHHHTC--CHHHHHHHHHHHHHTTSEEEESCSSSSCCE
T ss_pred HHHHHHHHHHHHhhccCCCcCHHHHHHHHCC--CHHHHHHHHHHHHHCCcEEecCCCCCcHHH
Confidence 4567777776510001258999999999999 477899999999987532223355554443
No 64
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=57.47 E-value=14 Score=38.60 Aligned_cols=39 Identities=23% Similarity=0.334 Sum_probs=26.7
Q ss_pred eEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHH
Q 007074 192 SILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGID 233 (619)
Q Consensus 192 ~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~ 233 (619)
.|.+||+||. |..++.+.......++++.. -|+|+..|.
T Consensus 9 ~I~viGvGg~--G~n~vn~m~~~~~~gv~~ia-~NTD~q~L~ 47 (338)
T 2r75_1 9 KIKVIGVGGG--GSNAVNRMYEDGIEGVELYA-INTDVQHLS 47 (338)
T ss_dssp CEEEEEEHHH--HHHHHHHHHHTTCCSCEEEE-EESBHHHHH
T ss_pred eEEEEeeCcc--HHHHHHHHHHhCCCCceEEE-EECCHHHHh
Confidence 4889999986 77788776655444455544 577976654
No 65
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=56.90 E-value=16 Score=36.47 Aligned_cols=39 Identities=10% Similarity=0.179 Sum_probs=33.0
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
-+|++.|.+ .+.|++|||+++|. +...+..+||+|++.+
T Consensus 29 l~i~~~l~~-------~~~t~~ela~~~~~--~~~~l~r~L~~L~~~g 67 (335)
T 2r3s_A 29 LNVFTAISQ-------GIESSQSLAQKCQT--SERGMRMLCDYLVIIG 67 (335)
T ss_dssp TTHHHHHTT-------SEECHHHHHHHHTC--CHHHHHHHHHHHHHTT
T ss_pred cChHHHHhc-------CCCCHHHHHHHhCC--CchHHHHHHHHHHhcC
Confidence 368888875 38999999999999 4788999999999974
No 66
>1z00_B DNA repair endonuclease XPF; helix-hairpin-helix, hydrolase; HET: DNA; NMR {Homo sapiens} SCOP: a.60.2.5 PDB: 2aq0_A*
Probab=54.40 E-value=9.5 Score=32.05 Aligned_cols=47 Identities=21% Similarity=0.352 Sum_probs=38.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCch-hhHHHHHHH
Q 007074 525 QPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPED-IEMIYKIIA 584 (619)
Q Consensus 525 QPGVE~gK~~a~~il~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 584 (619)
-||| |.+..+.+|+..+.+.++.+ .|++||++.+|. .. .+.||..|.
T Consensus 23 IpGI--G~kr~~~LL~~FgSl~~i~~----------AS~eEL~~vig~-~~~A~~I~~~l~ 70 (84)
T 1z00_B 23 MPGV--NAKNCRSLMHHVKNIAELAA----------LSQDELTSILGN-AANAKQLYDFIH 70 (84)
T ss_dssp CSSC--CHHHHHHHHHHSSCHHHHHH----------SCHHHHHHHHSC-HHHHHHHHHHHT
T ss_pred CCCC--CHHHHHHHHHHcCCHHHHHH----------CCHHHHHHHhCc-hHHHHHHHHHHH
Confidence 4888 88888999999998888764 479999999996 55 899998774
No 67
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=53.85 E-value=12 Score=38.65 Aligned_cols=44 Identities=30% Similarity=0.405 Sum_probs=34.6
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHcCC---CchhhHHHHHHHHHhcCC
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERCHT---PEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 590 (619)
=.|++.|.+.. +.++|++|||+++|. |+....+..+||+|++.+
T Consensus 43 Lgifd~L~~~g----~~~~t~~eLA~~~g~~~~~~~~~~l~rlLr~L~~~g 89 (364)
T 3p9c_A 43 LGLLEILVAAG----GKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYN 89 (364)
T ss_dssp HTHHHHHHHTT----TCCBCHHHHHHTTTCTTCTTHHHHHHHHHHHHHHTT
T ss_pred CChHHHHhhcC----CCCCCHHHHHHhcCCCCCccchhhHHHHHHHHHhCC
Confidence 36888887731 258999999999994 344558899999999974
No 68
>2vxz_A Pyrsv_GP04; viral protein, SSPF, ORF165A; 1.7A {Pyrobaculum spherical virus}
Probab=53.82 E-value=15 Score=34.48 Aligned_cols=49 Identities=20% Similarity=0.196 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCC
Q 007074 534 AAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDR 591 (619)
Q Consensus 534 ~a~~il~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (619)
.+.++++-.++|+++|++ .+.|..+||+++|. +--++|++|.-|.-++.
T Consensus 5 ~Td~v~erk~~ILE~Lk~-------G~~~t~~Iak~LGl--Shg~aq~~Ly~LeREG~ 53 (165)
T 2vxz_A 5 HSREVLVRLRDILALLAD-------GCKTTSLIQQRLGL--SHGRAKALIYVLEKEGR 53 (165)
T ss_dssp CCHHHHHHHHHHHHHHTT-------CCEEHHHHHHHHTC--CHHHHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHHHHHHHh-------CCccHHHHHHHhCC--cHHHHHHHHHHHHhcCc
Confidence 357899999999999994 38999999999999 66678999999998863
No 69
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=53.36 E-value=52 Score=31.80 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=61.9
Q ss_pred eEEEEecccC--chHHHHHHHHhcCCCCCceEEEE-eCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHH
Q 007074 192 SILSVGIGGS--ALGPQFVAEALAPDNPPLKIRFI-DNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQ 268 (619)
Q Consensus 192 ~VVvIGIGGS--~LGp~~v~~aL~~~~~~~~i~Fv-dN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~ 268 (619)
.||+--++|- .+|-.++...|+.. +.+++++ .++.++.+.+...+.+|+ +|.+|-|.....|+..++...
T Consensus 94 ~vll~~v~gd~HdiG~~iv~~~l~~~--G~~Vi~LG~~vp~e~iv~~~~~~~~d-----~v~l~~S~l~~~~~~~~~~~i 166 (215)
T 3ezx_A 94 LAITFVAEGDIHDIGHRLVTTMLGAN--GFQIVDLGVDVLNENVVEEAAKHKGE-----KVLLVGSALMTTSMLGQKDLM 166 (215)
T ss_dssp EEEEEECTTCCCCHHHHHHHHHHHHT--SCEEEECCSSCCHHHHHHHHHHTTTS-----CEEEEEECSSHHHHTHHHHHH
T ss_pred eEEEEeCCCChhHHHHHHHHHHHHHC--CCeEEEcCCCCCHHHHHHHHHHcCCC-----EEEEEchhcccCcHHHHHHHH
Confidence 4666666654 79999999999864 3588888 678899999999888876 677766677777888899999
Q ss_pred HHHHHhcc
Q 007074 269 KAFREAGL 276 (619)
Q Consensus 269 ~~l~~~g~ 276 (619)
+.+++.|.
T Consensus 167 ~~l~~~~~ 174 (215)
T 3ezx_A 167 DRLNEEKL 174 (215)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 98888765
No 70
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=52.65 E-value=1e+02 Score=30.98 Aligned_cols=109 Identities=14% Similarity=0.266 Sum_probs=74.9
Q ss_pred hHHHHHHHHhcCCC---CCceEEEEeC---CChhHHHHHHHhh-------CcCCCcEEEEEEcCCCCCHHHHHHHHHHHH
Q 007074 203 LGPQFVAEALAPDN---PPLKIRFIDN---TDPAGIDHQIAQL-------GPELASTLVVVISKSGGTPETRNGLLEVQK 269 (619)
Q Consensus 203 LGp~~v~~aL~~~~---~~~~i~FvdN---~DP~~i~~~l~~L-------~~~l~~TLvIViSKSGtT~ETl~~~~~a~~ 269 (619)
+|.-.+.+.+.+++ .++.++.+.. .+|+.+.++...+ +| -++|++|--+.++=+. .+|+
T Consensus 14 igts~~idl~LDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~~~~p----DfvI~isPN~a~PGP~----~ARE 85 (283)
T 1qv9_A 14 LGTSMMMDMLLDERADREDVEFRVVGTSVKMDPECVEAAVEMALDIAEDFEP----DFIVYGGPNPAAPGPS----KARE 85 (283)
T ss_dssp CHHHHHTTGGGSTTSCCSSEEEEEEECTTCCSHHHHHHHHHHHHHHHHHHCC----SEEEEECSCTTSHHHH----HHHH
T ss_pred cchHHHHHHHHHhhhccCCceEEEeccCCCCCHHHHHHHHHHhhhhhhhcCC----CEEEEECCCCCCCCch----HHHH
Confidence 57777888877763 3577777744 6799888876654 55 4789999999998774 4566
Q ss_pred HHHHhccccCCEEEEEec-CCchhhhhHHHhCCc-ceeeccCCCCCcchhhhHhhH
Q 007074 270 AFREAGLEFAKQGVAITQ-ENSLLDNTVRIEGWL-ARFPMFDWVGGRTSEMSAVGL 323 (619)
Q Consensus 270 ~l~~~g~~~~~h~VaVT~-~~s~L~~~A~~~g~~-~~F~~pd~VGGRfSvlSaVGL 323 (619)
.|.++ +.-.|.||+ ++.+-++.-+++||. -+.+..+-||-|--++-++=+
T Consensus 86 ~l~~~----~iP~IvI~D~p~~K~kd~l~~~g~GYIivk~DpMIGArREFLDP~EM 137 (283)
T 1qv9_A 86 MLADS----EYPAVIIGDAPGLKVKDEMEEQGLGYILVKPDAMLGARREFLDPVEM 137 (283)
T ss_dssp HHHTS----SSCEEEEEEGGGGGGHHHHHHTTCEEEEETTSCCCCCCTTTCCHHHH
T ss_pred HHHhC----CCCEEEEcCCcchhhHHHHHhcCCcEEEEecCccccchhhccCHHHH
Confidence 66554 445888998 444444444556763 244566778999888887765
No 71
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=51.94 E-value=25 Score=28.90 Aligned_cols=41 Identities=12% Similarity=0.214 Sum_probs=35.5
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCC
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDR 591 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (619)
.+|+++|++. ...|++|||+.++. +..+|-..|.+|...+.
T Consensus 5 ~~Il~~L~~~------g~vsv~eLa~~l~V--S~~TIRrdL~~Le~~G~ 45 (78)
T 1xn7_A 5 IQVRDLLALR------GRMEAAQISQTLNT--PQPMINAMLQQLESMGK 45 (78)
T ss_dssp HHHHHHHHHS------CSBCHHHHHHHTTC--CHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHc------CCCcHHHHHHHHCc--CHHHHHHHHHHHHHCCC
Confidence 4678888876 48999999999998 77899999999999874
No 72
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=50.73 E-value=20 Score=38.13 Aligned_cols=40 Identities=25% Similarity=0.409 Sum_probs=27.0
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHH
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGID 233 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~ 233 (619)
..|.+||+||- |..++.+.......+.+++. -|+|...+.
T Consensus 12 ~~I~vIGvGg~--G~navn~m~~~gi~gv~fia-~NTD~q~L~ 51 (382)
T 2vxy_A 12 ASIKVIGVGGG--GNNAVNRMIENEVQGVEYIA-VNTDAQALN 51 (382)
T ss_dssp CCEEEEEEHHH--HHHHHHHHHHTTCCSCEEEE-EESBHHHHH
T ss_pred CEEEEEeeCch--HHHHHHHHHHhCCCCCCEEE-EeCCHHHHh
Confidence 45999999986 77788777665444456544 467866543
No 73
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=50.69 E-value=28 Score=30.93 Aligned_cols=42 Identities=7% Similarity=0.211 Sum_probs=35.8
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
.+.+|+..|.+. .+.|..|||+++|. +..+|...|+.|...+
T Consensus 6 ~d~~il~~L~~~------~~~s~~ela~~lg~--s~~tv~~~l~~L~~~G 47 (144)
T 2cfx_A 6 IDLNIIEELKKD------SRLSMRELGRKIKL--SPPSVTERVRQLESFG 47 (144)
T ss_dssp HHHHHHHHHHHC------SCCCHHHHHHHHTC--CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHc------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 456888889875 37999999999998 6788999999998875
No 74
>3r0a_A Putative transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.31A {Methanosarcina mazei}
Probab=50.68 E-value=17 Score=31.83 Aligned_cols=44 Identities=7% Similarity=0.240 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhhccCCCCCCC-CCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 540 ALQKRVLAVLNEASCKEPVEP-LTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
..+.+|+..|.+.. .+ +|+.|||+.++. ..-+||..|..|...+
T Consensus 26 ~~e~~il~~L~~~~-----~~~~t~~eLa~~l~~--s~sTV~r~L~~L~~~G 70 (123)
T 3r0a_A 26 KADLNVMKSFLNEP-----DRWIDTDALSKSLKL--DVSTVQRSVKKLHEKE 70 (123)
T ss_dssp HHHHHHHHHHHHST-----TCCEEHHHHHHHHTS--CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCC-----CCCcCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 44678888887753 35 999999999998 6789999999999764
No 75
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=50.63 E-value=33 Score=35.11 Aligned_cols=57 Identities=12% Similarity=0.066 Sum_probs=37.0
Q ss_pred cEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecCCchhhhhHHHhCCcceeeccCC
Q 007074 245 STLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQENSLLDNTVRIEGWLARFPMFDW 310 (619)
Q Consensus 245 ~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~~~~F~~pd~ 310 (619)
.-++|.+|++|+..+. ..+..+. | +....+++|-++...+..+|+++|+ +++.+|..
T Consensus 96 ~ri~vl~Sg~g~~l~~------ll~~~~~-g-~l~~~i~~Visn~~~~~~~A~~~gI-p~~~~~~~ 152 (292)
T 3lou_A 96 PKVLIMVSKLEHCLAD------LLFRWKM-G-ELKMDIVGIVSNHPDFAPLAAQHGL-PFRHFPIT 152 (292)
T ss_dssp CEEEEEECSCCHHHHH------HHHHHHH-T-SSCCEEEEEEESSSTTHHHHHHTTC-CEEECCCC
T ss_pred CEEEEEEcCCCcCHHH------HHHHHHc-C-CCCcEEEEEEeCcHHHHHHHHHcCC-CEEEeCCC
Confidence 5678889999964433 2222222 2 2345777776655557788999997 88877753
No 76
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=49.89 E-value=13 Score=38.29 Aligned_cols=41 Identities=20% Similarity=0.210 Sum_probs=34.1
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
=.|++.|.++. .|+|++|||+++|. +...+..+||.|++..
T Consensus 31 Lglfd~L~~~~-----~p~t~~eLA~~~g~--~~~~l~rlLr~L~~~g 71 (353)
T 4a6d_A 31 LGVFDLLAEAP-----GPLDVAAVAAGVRA--SAHGTELLLDICVSLK 71 (353)
T ss_dssp HTHHHHHHHSS-----SCBCHHHHHHHHTC--CHHHHHHHHHHHHHTT
T ss_pred cCHHHHHhcCC-----CCCCHHHHHHhhCc--CHHHHHHHHHHHHHCC
Confidence 37888998754 58999999999998 4567889999999864
No 77
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=48.57 E-value=79 Score=29.88 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=54.9
Q ss_pred eEEEEecccC--chHHHHHHHHhcCCCCCceEEEE-eCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHH
Q 007074 192 SILSVGIGGS--ALGPQFVAEALAPDNPPLKIRFI-DNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQ 268 (619)
Q Consensus 192 ~VVvIGIGGS--~LGp~~v~~aL~~~~~~~~i~Fv-dN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~ 268 (619)
.||+...+|- .+|-.++...|... +.+++++ .++.++.+.+...+.+|+ +|++|-+-+| ++..++...
T Consensus 90 ~vll~~~~gd~H~iG~~~va~~l~~~--G~~v~~LG~~vp~~~l~~~~~~~~~d-----~v~lS~~~~~--~~~~~~~~i 160 (210)
T 1y80_A 90 KIVLGTVKGDLHDIGKNLVAMMLESG--GFTVYNLGVDIEPGKFVEAVKKYQPD-----IVGMSALLTT--TMMNMKSTI 160 (210)
T ss_dssp EEEEEEBTTCCCCHHHHHHHHHHHHT--TCEEEECCSSBCHHHHHHHHHHHCCS-----EEEEECCSGG--GTHHHHHHH
T ss_pred EEEEEeCCCcccHHHHHHHHHHHHHC--CCEEEECCCCCCHHHHHHHHHHcCCC-----EEEEeccccc--cHHHHHHHH
Confidence 4666666655 69999999999764 4688888 557789999998888874 5555554333 566777777
Q ss_pred HHHHHhcc
Q 007074 269 KAFREAGL 276 (619)
Q Consensus 269 ~~l~~~g~ 276 (619)
+.+++.|.
T Consensus 161 ~~l~~~~~ 168 (210)
T 1y80_A 161 DALIAAGL 168 (210)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 77777654
No 78
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=48.51 E-value=27 Score=35.55 Aligned_cols=56 Identities=14% Similarity=0.163 Sum_probs=36.6
Q ss_pred cEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecCCchhhhhHHHhCCcceeeccC
Q 007074 245 STLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQENSLLDNTVRIEGWLARFPMFD 309 (619)
Q Consensus 245 ~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~~~~F~~pd 309 (619)
.-++|.+|++|+..+. ..+..+. | .....+++|-++...+..+|+++|+ +++.+|.
T Consensus 91 ~ri~vl~Sg~g~~l~~------ll~~~~~-g-~l~~~i~~Visn~~~~~~~A~~~gI-p~~~~~~ 146 (286)
T 3n0v_A 91 PKVVIMVSKADHCLND------LLYRQRI-G-QLGMDVVAVVSNHPDLEPLAHWHKI-PYYHFAL 146 (286)
T ss_dssp CEEEEEESSCCHHHHH------HHHHHHT-T-SSCCEEEEEEESSSTTHHHHHHTTC-CEEECCC
T ss_pred cEEEEEEeCCCCCHHH------HHHHHHC-C-CCCcEEEEEEeCcHHHHHHHHHcCC-CEEEeCC
Confidence 4588899999964433 2222222 2 2345777776655557788999997 7887775
No 79
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=47.85 E-value=13 Score=37.43 Aligned_cols=43 Identities=19% Similarity=0.272 Sum_probs=34.4
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEee
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAE 596 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (619)
-+|++.|.+ .+.|++|||+++|. +.+.+..+||+|++. |+..+
T Consensus 28 lglf~~l~~-------g~~t~~elA~~~~~--~~~~l~rlLr~l~~~--gl~~~ 70 (332)
T 3i53_A 28 LRVADHIAA-------GHRTAAEIASAAGA--HADSLDRLLRHLVAV--GLFTR 70 (332)
T ss_dssp HTHHHHHHT-------TCCBHHHHHHHHTC--CHHHHHHHHHHHHHT--TSEEE
T ss_pred cChHHHHhc-------CCCCHHHHHHHHCc--CHHHHHHHHHHHHhC--CcEEe
Confidence 368888865 28999999999999 455899999999995 55544
No 80
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=47.81 E-value=13 Score=38.15 Aligned_cols=44 Identities=11% Similarity=0.337 Sum_probs=35.7
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCc-hhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPE-DIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 590 (619)
.-+|++.|.++. .+.|++|||+++|.+. ....+..+||+|++.+
T Consensus 32 ~lgif~~L~~~~-----~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g 76 (358)
T 1zg3_A 32 ELGIADAIHNHG-----KPMTLSELASSLKLHPSKVNILHRFLRLLTHNG 76 (358)
T ss_dssp HHTHHHHHHHHT-----SCEEHHHHHHHTTCCTTTHHHHHHHHHHHHHTT
T ss_pred HCChHhHHhhcC-----CCcCHHHHHHhcCCCCcchHHHHHHHHHHhhCC
Confidence 447888887742 3899999999999843 5778999999999974
No 81
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=47.66 E-value=33 Score=31.74 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC--CceEeecCC
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND--RALIAEGSC 599 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 599 (619)
+.+.+|+..|.+.. ..|..|||+++|. +..+|...|+.|...+ +++...-|.
T Consensus 17 ~~d~~IL~~L~~~~------~~s~~eLA~~lgl--S~~tv~~~l~~L~~~G~I~~~~~~~d~ 70 (171)
T 2ia0_A 17 DLDRNILRLLKKDA------RLTISELSEQLKK--PESTIHFRIKKLQERGVIERYTIILGE 70 (171)
T ss_dssp HHHHHHHHHHHHCT------TCCHHHHHHHHTS--CHHHHHHHHHHHHHTTSEEEEEEEECT
T ss_pred HHHHHHHHHHHHcC------CCCHHHHHHHHCc--CHHHHHHHHHHHHHCCCEEeecccCCH
Confidence 34568899998753 7999999999998 6788999999998876 344444343
No 82
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=46.95 E-value=83 Score=29.04 Aligned_cols=88 Identities=14% Similarity=0.221 Sum_probs=46.5
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCC-------C-------CceEEEE--eCCChhHHHHHHHhhCcCCCcEEEEEEcCC
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDN-------P-------PLKIRFI--DNTDPAGIDHQIAQLGPELASTLVVVISKS 254 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~-------~-------~~~i~Fv--dN~DP~~i~~~l~~L~~~l~~TLvIViSKS 254 (619)
..|+|+|-.| .+|..++...+.... . ..++.++ |-.|++.+.++++.+ +.+|..++.+
T Consensus 5 ~~ilItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASG-FVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGA-----DAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCH-HHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTC-----SEEEECCCC-
T ss_pred CEEEEEcCCc-hHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCC-----CEEEEeCcCC
Confidence 4688877544 477777766654321 0 0233443 556788888888754 5677766554
Q ss_pred CCCHHH----HHHHHHHHHHHHHhccccCCEEEEEec
Q 007074 255 GGTPET----RNGLLEVQKAFREAGLEFAKQGVAITQ 287 (619)
Q Consensus 255 GtT~ET----l~~~~~a~~~l~~~g~~~~~h~VaVT~ 287 (619)
....+. ......+.+++.+.+ .+|+|.+++
T Consensus 79 ~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~v~~Ss 112 (227)
T 3dhn_A 79 WNNPDIYDETIKVYLTIIDGVKKAG---VNRFLMVGG 112 (227)
T ss_dssp -----CCSHHHHHHHHHHHHHHHTT---CSEEEEECC
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhC---CCEEEEeCC
Confidence 333221 222233333333332 368998887
No 83
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=46.36 E-value=87 Score=33.86 Aligned_cols=37 Identities=38% Similarity=0.496 Sum_probs=22.1
Q ss_pred CCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCC
Q 007074 188 GRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTD 228 (619)
Q Consensus 188 ~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~D 228 (619)
+.+++|.+||||||+.++ +.+.|... +.+|...|.-+
T Consensus 20 ~~~~~v~viGiG~sG~s~--~A~~l~~~--G~~V~~~D~~~ 56 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGG--IAEVLANE--GYQISGSDLAP 56 (494)
T ss_dssp --CCEEEEETTTSTTHHH--HHHHHHHT--TCEEEEECSSC
T ss_pred ccCCEEEEEEEcHhhHHH--HHHHHHhC--CCeEEEEECCC
Confidence 346899999999998754 23444332 23566555433
No 84
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=45.95 E-value=34 Score=30.61 Aligned_cols=42 Identities=19% Similarity=0.208 Sum_probs=35.8
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
...+|+..|.+. ...|..|||+++|. +..+|...|+.|...+
T Consensus 9 ~d~~il~~L~~~------~~~s~~ela~~lg~--s~~tv~~~l~~L~~~G 50 (152)
T 2cg4_A 9 LDRGILEALMGN------ARTAYAELAKQFGV--SPETIHVRVEKMKQAG 50 (152)
T ss_dssp HHHHHHHHHHHC------TTSCHHHHHHHHTS--CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHcC
Confidence 456888889875 37999999999998 6788999999998876
No 85
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=45.94 E-value=36 Score=30.35 Aligned_cols=42 Identities=12% Similarity=0.249 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
.+.+|+..|.+. .+.|..|||+++|. ...+|...|+.|...+
T Consensus 8 ~~~~iL~~L~~~------~~~s~~ela~~lg~--s~~tv~~~l~~L~~~G 49 (150)
T 2w25_A 8 IDRILVRELAAD------GRATLSELATRAGL--SVSAVQSRVRRLESRG 49 (150)
T ss_dssp HHHHHHHHHHHC------TTCCHHHHHHHHTS--CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHc------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 456888889775 37999999999998 5678999999999875
No 86
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=45.28 E-value=16 Score=36.64 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=32.7
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
-+|++.|.+ .+.|++|||+++|. +...+..+||+|++.+
T Consensus 31 lgi~~~l~~-------~~~t~~ela~~~~~--~~~~l~r~Lr~L~~~g 69 (334)
T 2ip2_A 31 LGLADLIES-------GIDSDETLAAAVGS--DAERIHRLMRLLVAFE 69 (334)
T ss_dssp TTHHHHHHT-------TCCSHHHHHHHHTC--CHHHHHHHHHHHHHTT
T ss_pred cCcHHHHhC-------CCCCHHHHHHHhCc--CHHHHHHHHHHHHhCC
Confidence 367888865 38999999999998 4588999999999973
No 87
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=45.27 E-value=15 Score=37.88 Aligned_cols=42 Identities=12% Similarity=0.115 Sum_probs=34.0
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
.-.|++.|.+.. .+.|++|||+++|. +...+..+||+|++.+
T Consensus 37 ~lgifd~L~~~~-----~~~t~~eLA~~~g~--~~~~l~rlLr~l~~~g 78 (363)
T 3dp7_A 37 KFGIFQLLSGKR-----EGYTLQEISGRTGL--TRYAAQVLLEASLTIG 78 (363)
T ss_dssp HTTHHHHHHTCT-----TCBCHHHHHHHHTC--CHHHHHHHHHHHHHHT
T ss_pred HhCHHHHHHhcC-----CCCCHHHHHHHhCc--CHHHHHHHHHHHhhCC
Confidence 336888887732 48999999999999 4566999999999973
No 88
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=45.15 E-value=36 Score=30.77 Aligned_cols=42 Identities=21% Similarity=0.258 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
...+|+..|.+.. +.|..|||+++|. +.-+|...|+.|-..+
T Consensus 11 ~~~~il~~L~~~~------~~s~~ela~~lg~--s~~tv~~~l~~L~~~G 52 (162)
T 2p5v_A 11 TDIKILQVLQENG------RLTNVELSERVAL--SPSPCLRRLKQLEDAG 52 (162)
T ss_dssp HHHHHHHHHHHCT------TCCHHHHHHHHTS--CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC------CCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 4568888888753 7899999999998 5778999999998875
No 89
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=44.85 E-value=31 Score=35.15 Aligned_cols=114 Identities=13% Similarity=0.037 Sum_probs=63.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcC-CCCCceEEEEeCCChhHHHHHHHhhCcCCCc
Q 007074 167 AVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAP-DNPPLKIRFIDNTDPAGIDHQIAQLGPELAS 245 (619)
Q Consensus 167 ~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~-~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~ 245 (619)
+++++++++. . ++++++|-|-.+ |-+..-+|+= +.. .+|-.....++..+--+.-+++ +
T Consensus 177 ~~~~~a~~~~------------~-~~~~~lG~G~~~--~~A~E~aLKl~E~~--~i~a~~~~~~E~~HGp~~li~~---~ 236 (325)
T 2e5f_A 177 YIREIVESFD------------F-QNIIFLGSGLLY--PVALEASLKMKEMS--IFWSEAYPTFEVRHGFKAIADE---K 236 (325)
T ss_dssp HHHHHHHHCC------------C-SEEEEEECTTHH--HHHHHHHHHHHHHH--CCEEEEEEGGGGGTTGGGGCST---T
T ss_pred HHHHHHHHhc------------C-CCEEEEccCCCH--HHHHHHHHHHHHHH--HHHhhhcCHHHhhhccHhhcCC---C
Confidence 4666677653 4 789999988653 2233333321 011 2332222235554555555664 6
Q ss_pred EEEEEEcCCCCCHH-HHHHHHHHHHHHHHhccccCCEEEEEecCCchhhhhHHHhCCcceeeccCCCCCcchhh
Q 007074 246 TLVVVISKSGGTPE-TRNGLLEVQKAFREAGLEFAKQGVAITQENSLLDNTVRIEGWLARFPMFDWVGGRTSEM 318 (619)
Q Consensus 246 TLvIViSKSGtT~E-Tl~~~~~a~~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~~~~F~~pd~VGGRfSvl 318 (619)
|.||++. +.+.| +..+++++++ .+.++++||+++. .......+.+|+ +.+.++.+
T Consensus 237 ~~vi~~~--~~~~~~~~~~~~e~~~--------~g~~v~~i~~~~~-------~~~~~~~~~~p~-~~~~l~pl 292 (325)
T 2e5f_A 237 TLVVLMV--EEPFEWHEKLVKEFKN--------QGAKVLVISNSPQ-------DLGQDYSIELPR-LSKDANPI 292 (325)
T ss_dssp EEEEEEE--SSCCHHHHHHHHHHHH--------TTCEEEEEESCCC-------CCSCSEEEECCC-CCTTTTTT
T ss_pred CeEEEEe--CchHHHHHHHHHHHHH--------cCCeEEEEeCCcc-------cccCCcEEEeCC-CchhHHHH
Confidence 7777776 77766 7767766554 2688999997421 111014677775 45555544
No 90
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=44.30 E-value=36 Score=30.27 Aligned_cols=43 Identities=21% Similarity=0.272 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+...+|+..|.+. ...|..|||+++|. +..+|...++.|..++
T Consensus 9 ~~d~~il~~L~~~------~~~s~~ela~~lg~--s~~tv~~~l~~L~~~G 51 (151)
T 2dbb_A 9 RVDMQLVKILSEN------SRLTYRELADILNT--TRQRIARRIDKLKKLG 51 (151)
T ss_dssp HHHHHHHHHHHHC------TTCCHHHHHHHTTS--CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 3456888999875 37999999999998 6778999999998875
No 91
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=43.73 E-value=35 Score=31.15 Aligned_cols=50 Identities=22% Similarity=0.389 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC--CceEeecC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND--RALIAEGS 598 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 598 (619)
.-.+|+..|.+.. ++|..+||+++|. +..+|..-++.|-..+ +++.+.=|
T Consensus 4 ~d~~il~~L~~~~------~~s~~~la~~lg~--s~~tv~~rl~~L~~~g~i~~~~a~~~ 55 (162)
T 3i4p_A 4 LDRKILRILQEDS------TLAVADLAKKVGL--STTPCWRRIQKMEEDGVIRRRVALLD 55 (162)
T ss_dssp HHHHHHHHHTTCS------CSCHHHHHHHHTC--CHHHHHHHHHHHHHTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHCC------CCCHHHHHHHHCc--CHHHHHHHHHHHHHCCCeeeceeeeC
Confidence 3468899998763 7899999999999 6779999999999886 44444333
No 92
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=43.60 E-value=18 Score=36.95 Aligned_cols=44 Identities=16% Similarity=0.289 Sum_probs=35.0
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEee
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAE 596 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (619)
.-+|++.|.+ .+.|++|||+++|. +...+..+||+|++. |+..+
T Consensus 38 ~l~i~~~l~~-------~~~t~~eLA~~~g~--~~~~l~r~Lr~L~~~--Gll~~ 81 (374)
T 1qzz_A 38 TLRLVDHLLA-------GADTLAGLADRTDT--HPQALSRLVRHLTVV--GVLEG 81 (374)
T ss_dssp HTTHHHHHHT-------TCCSHHHHHHHHTC--CHHHHHHHHHHHHHT--TSEEC
T ss_pred HcChHHHHhC-------CCCCHHHHHHHhCc--CHHHHHHHHHHHhhC--CCEEE
Confidence 4478888854 37999999999999 468899999999987 44443
No 93
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=43.49 E-value=74 Score=30.70 Aligned_cols=86 Identities=17% Similarity=0.217 Sum_probs=47.7
Q ss_pred EEEEecccCchHHHHHHHHhcC-CC-----------------CCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCC
Q 007074 193 ILSVGIGGSALGPQFVAEALAP-DN-----------------PPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKS 254 (619)
Q Consensus 193 VVvIGIGGS~LGp~~v~~aL~~-~~-----------------~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKS 254 (619)
|+|+|-.| .+|..++...+.. .. .+.+++-.|-.|++.+.++++.+ +.+|.+++.+
T Consensus 3 ilVtGatG-~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~-----d~vi~~a~~~ 76 (289)
T 3e48_A 3 IMLTGATG-HLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGM-----DTVVFIPSII 76 (289)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTC-----SEEEECCCCC
T ss_pred EEEEcCCc-hHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCC-----CEEEEeCCCC
Confidence 67776544 3677777664432 11 12233444667888888877654 5777776654
Q ss_pred CCCHHHHHHHHHHHHHHHHhccccCCEEEEEec
Q 007074 255 GGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ 287 (619)
Q Consensus 255 GtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~ 287 (619)
..........+.+.+..++.| .+|+|.+++
T Consensus 77 ~~~~~~~~~~~~l~~aa~~~g---v~~iv~~Ss 106 (289)
T 3e48_A 77 HPSFKRIPEVENLVYAAKQSG---VAHIIFIGY 106 (289)
T ss_dssp CSHHHHHHHHHHHHHHHHHTT---CCEEEEEEE
T ss_pred ccchhhHHHHHHHHHHHHHcC---CCEEEEEcc
Confidence 443332333333333333333 368998887
No 94
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=42.99 E-value=16 Score=37.28 Aligned_cols=44 Identities=11% Similarity=0.372 Sum_probs=35.4
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCc-hhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPE-DIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 590 (619)
.-+|++.|.++. .+.|++|||+++|.+. ....+..+||+|++.+
T Consensus 38 ~lgif~~L~~~~-----~~~t~~ela~~~~~~~~~~~~l~rlLr~L~~~g 82 (352)
T 1fp2_A 38 EMNIPNIIQNHG-----KPISLSNLVSILQVPSSKIGNVRRLMRYLAHNG 82 (352)
T ss_dssp HTTHHHHHHHHT-----SCEEHHHHHHHHTCCGGGHHHHHHHHHHHHHTT
T ss_pred HCChhhhhhhcC-----CCccHHHHHHHhCcCCCChHHHHHHHHHHHhCC
Confidence 447888887742 3899999999999843 4778999999999963
No 95
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=42.93 E-value=35 Score=27.73 Aligned_cols=41 Identities=12% Similarity=0.232 Sum_probs=33.9
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+-+|+..|... .+.|..+||+.+|. ..-+|+.+|+.|...+
T Consensus 22 ~~~il~~l~~~------~~~s~~ela~~l~i--s~~tv~~~l~~L~~~g 62 (109)
T 1sfx_A 22 DVRIYSLLLER------GGMRVSEIARELDL--SARFVRDRLKVLLKRG 62 (109)
T ss_dssp HHHHHHHHHHH------CCBCHHHHHHHHTC--CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHc------CCCCHHHHHHHHCC--CHHHHHHHHHHHHHCC
Confidence 45777778664 37999999999998 6788999999999874
No 96
>1t6s_A Conserved hypothetical protein; A winged helix-turn-helix, structural genomics, BSGC structu by NIH, protein structure initiative, PSI; 1.95A {Chlorobium tepidum tls} SCOP: a.4.5.60 a.4.5.60
Probab=42.66 E-value=59 Score=30.50 Aligned_cols=53 Identities=11% Similarity=0.197 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHh----cCCCceEee
Q 007074 539 LALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMA----ANDRALIAE 596 (619)
Q Consensus 539 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 596 (619)
-++...|+++|=... +|+|+++||+.++..-+.+.|-.+|..|. ..+||+.+.
T Consensus 6 ~~~~~~iEAlLf~~~-----~pvs~~~La~~~~~~~~~~~v~~~l~~L~~~y~~~~rg~~l~ 62 (162)
T 1t6s_A 6 QQLLRSLEALIFSSE-----EPVNLQTLSQITAHKFTPSELQEAVDELNRDYEATGRTFRIH 62 (162)
T ss_dssp HHHHHHHHHHHHHCS-----SCBCHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHcC-----CCCCHHHHHHHhCcCCCHHHHHHHHHHHHHHhhhCCCCEEEE
Confidence 345667888887753 79999999999983224455566666654 447888754
No 97
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=41.44 E-value=31 Score=29.11 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=37.0
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEe
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIA 595 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (619)
.+|+++|++. ...|++|||+.++. +..+|-..|.+|...+.=...
T Consensus 5 ~~Il~~L~~~------g~vsv~eLA~~l~V--S~~TIRrDL~~Le~~G~l~R~ 49 (87)
T 2k02_A 5 MEVRDMLALQ------GRMEAKQLSARLQT--PQPLIDAMLERMEAMGKVVRI 49 (87)
T ss_dssp HHHHHHHHHS------CSEEHHHHHHHTTC--CHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHHc------CCCcHHHHHHHHCc--CHHHHHHHHHHHHHCCCEEEE
Confidence 4688888876 48999999999998 778999999999998743333
No 98
>2p5k_A Arginine repressor; DNA-binding domain, winged helix-turn-helix (WHTH), DNA binding protein; 1.00A {Bacillus subtilis} SCOP: a.4.5.3 PDB: 2p5l_C*
Probab=41.32 E-value=45 Score=24.97 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.5
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHc-----CCCchhhHHHHHHHHH
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERC-----HTPEDIEMIYKIIAHM 586 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 586 (619)
..+..+|... ..+|++||++.+ +. +..|||..|..+
T Consensus 8 ~~i~~ll~~~------~~~t~~el~~~l~~~~~~v--s~~Tv~R~L~~l 48 (64)
T 2p5k_A 8 IKIREIITSN------EIETQDELVDMLKQDGYKV--TQATVSRDIKEL 48 (64)
T ss_dssp HHHHHHHHHS------CCCSHHHHHHHHHHTTCCC--CHHHHHHHHHHH
T ss_pred HHHHHHHHcC------CCCCHHHHHHHHHHhCCCc--CHHHHHHHHHHc
Confidence 3456666554 489999999999 65 678999888854
No 99
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=39.88 E-value=21 Score=36.45 Aligned_cols=40 Identities=8% Similarity=0.125 Sum_probs=33.5
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
.-+|++.|.+ .+.|++|||+++|. +...+..+||.|++.+
T Consensus 53 ~lgif~~L~~-------~~~t~~eLA~~~g~--~~~~l~rlLr~L~~~g 92 (359)
T 1x19_A 53 ELDLFSHMAE-------GPKDLATLAADTGS--VPPRLEMLLETLRQMR 92 (359)
T ss_dssp HHTHHHHHTT-------CCBCHHHHHHHHTC--CHHHHHHHHHHHHHTT
T ss_pred HcCcHHHHcC-------CCCCHHHHHHHhCc--ChHHHHHHHHHHHhCC
Confidence 3478888865 37999999999999 4678999999999974
No 100
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=39.36 E-value=39 Score=36.05 Aligned_cols=39 Identities=23% Similarity=0.372 Sum_probs=26.5
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHH
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGI 232 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i 232 (619)
..|++||+||- |.+++.+.......+.+++. -|+|...+
T Consensus 12 ~~I~vIGvGg~--G~n~vn~m~~~gi~gv~fia-~NTD~q~L 50 (394)
T 2vaw_A 12 AVIKVIGVGGG--GGNAVNHMAKNNVEGVEFIC-ANTDAQAL 50 (394)
T ss_dssp CCEEEEEEHHH--HHHHHHHHHTTTCCSEEEEE-EESCTTTT
T ss_pred CEEEEECcCch--HHHHHHHHHHcCCCCCCEEE-ecCCHHHH
Confidence 45999999986 78888777765444444433 56786653
No 101
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=39.26 E-value=33 Score=30.31 Aligned_cols=46 Identities=11% Similarity=0.244 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCC---CchhhHHHHHHHHHhcCC
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERCHT---PEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 590 (619)
.-+..|+++|.+.. .++|++||.+.+.. .-..-|||..|.-|...+
T Consensus 11 ~qR~~Il~~l~~~~-----~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~G 59 (131)
T 2o03_A 11 RQRAAISTLLETLD-----DFRSAQELHDELRRRGENIGLTTVYRTLQSMASSG 59 (131)
T ss_dssp HHHHHHHHHHHHCC-----SCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhCC-----CCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCC
Confidence 44567888887643 68999999999822 236789999999999875
No 102
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=39.08 E-value=36 Score=30.47 Aligned_cols=42 Identities=12% Similarity=0.250 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
.+.+|+..|.+. ...|..|||+++|. +..+|...|+.|...+
T Consensus 8 ~~~~il~~L~~~------~~~s~~ela~~lg~--s~~tv~~~l~~L~~~G 49 (151)
T 2cyy_A 8 IDKKIIKILQND------GKAPLREISKITGL--AESTIHERIRKLRESG 49 (151)
T ss_dssp HHHHHHHHHHHC------TTCCHHHHHHHHCS--CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 456888888875 37999999999998 6788999999998875
No 103
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=39.08 E-value=41 Score=29.28 Aligned_cols=42 Identities=7% Similarity=0.213 Sum_probs=31.1
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 544 RVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+++..|.... ++.+.|+++||+.+|. ....+.+||+.|...+
T Consensus 13 ~iL~~la~~~---~~~~~s~~ela~~~~i--~~~~v~~il~~L~~~G 54 (129)
T 2y75_A 13 TIMIELAKKH---GEGPTSLKSIAQTNNL--SEHYLEQLVSPLRNAG 54 (129)
T ss_dssp HHHHHHHHTT---TSCCBCHHHHHHHTTS--CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCC---CCCcCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 4555665532 3468999999999999 4567888998888754
No 104
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=39.06 E-value=12 Score=38.32 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=33.1
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEee
Q 007074 544 RVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAE 596 (619)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (619)
.|++.|.+ .+.|++|||+++|. +...+..+||+|++. |+..+
T Consensus 46 glf~~l~~-------g~~t~~elA~~~g~--~~~~l~rlLr~l~~~--g~l~~ 87 (348)
T 3lst_A 46 GVADHLVD-------GPRTPAELAAATGT--DADALRRVLRLLAVR--DVVRE 87 (348)
T ss_dssp TGGGGGTT-------SCBCHHHHHHHHTC--CHHHHHHHHHHHHHT--TSEEE
T ss_pred CchhHhhC-------CCCCHHHHHHHhCc--CHHHHHHHHHHHHhC--CCEEe
Confidence 56777754 38999999999999 455899999999997 44444
No 105
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=39.03 E-value=41 Score=35.80 Aligned_cols=40 Identities=28% Similarity=0.314 Sum_probs=26.4
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHH
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGID 233 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~ 233 (619)
..|++||+||- |.+++.+.......+.+++. -|+|...+.
T Consensus 12 ~~I~vIGvGg~--G~n~vn~m~~~gi~gv~fia-~NTD~q~L~ 51 (382)
T 1rq2_A 12 AVIKVVGIGGG--GVNAVNRMIEQGLKGVEFIA-INTDAQALL 51 (382)
T ss_dssp CCEEEEEEHHH--HHHHHHHHHHTTCCSEEEEE-EESCHHHHH
T ss_pred CEEEEECcCch--HHHHHHHHHHhCCCCCCEEE-ecCCHHHHh
Confidence 35999999986 77777776664433444433 577976654
No 106
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=38.69 E-value=1.8e+02 Score=32.30 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=60.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcC-CCCCceEEEEeCCChhHHHHHHHhhCcCCCc
Q 007074 167 AVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAP-DNPPLKIRFIDNTDPAGIDHQIAQLGPELAS 245 (619)
Q Consensus 167 ~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~-~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~ 245 (619)
+++++++++. ..++++++|-|-.+ |-+..-+|+= +.. .+|--....++..+--+.-+++ +
T Consensus 453 ~~~~la~~l~------------~~~~~~~lG~G~~~--~~A~e~alKl~E~s--~i~ae~~~a~e~~HGp~~lv~~---~ 513 (608)
T 2bpl_A 453 RIEALAEDFS------------DKHHALFLGRGDQY--PIALEGALKLKEIS--YIHAEAYAAGELKHGPLALIDA---D 513 (608)
T ss_dssp HHHHHHGGGT------------TCCEEEEEECGGGH--HHHHHHHHHHHHHH--CCEEEEEEGGGGGGTGGGGCCT---T
T ss_pred HHHHHHHHhh------------CCCeEEEEecCcCH--HHHHHHHHHHHHhc--cccceeecHHHhhhchHHHcCC---C
Confidence 4666777664 35789999987553 2222223320 000 1232222224444444455654 4
Q ss_pred EEEEEEcCCCCCH-HHHHHHHHHHHHHHHhccccCCEEEEEecCC-chhhhhHHHhCCcceeeccCCCCCcchhh
Q 007074 246 TLVVVISKSGGTP-ETRNGLLEVQKAFREAGLEFAKQGVAITQEN-SLLDNTVRIEGWLARFPMFDWVGGRTSEM 318 (619)
Q Consensus 246 TLvIViSKSGtT~-ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~~-s~L~~~A~~~g~~~~F~~pd~VGGRfSvl 318 (619)
+.|+++.-.|.+. .++.+++++++ . +.++++||+++ ..+...+ + .++.+|+ +..-++.+
T Consensus 514 ~~vi~i~~~~~~~~~~~~~~~e~~~----r----g~~v~~i~~~~~~~~~~~~---~--~~i~~p~-~~~~l~pl 574 (608)
T 2bpl_A 514 MPVIVVAPNNELLEKLKSNIEEVRA----R----GGQLYVFADQDAGFVSSDN---M--HIIEMPH-VEEVIAPI 574 (608)
T ss_dssp CEEEEEECSSTTHHHHHHHHHHHHH----T----TCEEEEEEETTSCCCCBTT---E--EEEEECC-CCGGGHHH
T ss_pred ceEEEEECCChhHHHHHHHHHHHHH----c----CCeEEEEECCCchhhcccC---C--cEEEcCC-CcchHHHH
Confidence 5555554456554 45555555544 2 68899999753 3333322 1 3577775 44444443
No 107
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=38.57 E-value=27 Score=35.61 Aligned_cols=56 Identities=14% Similarity=0.062 Sum_probs=35.1
Q ss_pred cEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecCCch-hhhhHHHhCCcceeeccC
Q 007074 245 STLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQENSL-LDNTVRIEGWLARFPMFD 309 (619)
Q Consensus 245 ~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~~s~-L~~~A~~~g~~~~F~~pd 309 (619)
.-++|.+|++|+..+. ..+..+. | .....+++|-++... +.+.|+++|+ +++.+|.
T Consensus 89 ~ri~vl~Sg~g~nl~~------ll~~~~~-g-~l~~~i~~Visn~~~a~~~~A~~~gI-p~~~~~~ 145 (287)
T 3nrb_A 89 KKVVIMVSKFDHCLGD------LLYRHRL-G-ELDMEVVGIISNHPREALSVSLVGDI-PFHYLPV 145 (287)
T ss_dssp CEEEEEECSCCHHHHH------HHHHHHH-T-SSCCEEEEEEESSCGGGCCCCCCTTS-CEEECCC
T ss_pred cEEEEEEeCCCcCHHH------HHHHHHC-C-CCCeEEEEEEeCChHHHHHHHHHcCC-CEEEEec
Confidence 4578899999964443 2322222 2 224567776654433 7778888887 7777765
No 108
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=38.14 E-value=23 Score=36.08 Aligned_cols=56 Identities=11% Similarity=0.068 Sum_probs=36.6
Q ss_pred cEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecCC-chhhhhHHHhCCcceeeccC
Q 007074 245 STLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQEN-SLLDNTVRIEGWLARFPMFD 309 (619)
Q Consensus 245 ~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~~-s~L~~~A~~~g~~~~F~~pd 309 (619)
.-++|.+|++|+..+.+ .+..+. | .....+++|-++. ..+.+.|+++|+ +++.+|.
T Consensus 90 ~ri~vl~Sg~g~nl~~l------l~~~~~-g-~l~~~i~~Visn~p~~~~~~A~~~gI-p~~~~~~ 146 (288)
T 3obi_A 90 RKVMLLVSQSDHCLADI------LYRWRV-G-DLHMIPTAIVSNHPRETFSGFDFGDI-PFYHFPV 146 (288)
T ss_dssp EEEEEEECSCCHHHHHH------HHHHHT-T-SSCEEEEEEEESSCGGGSCCTTTTTC-CEEECCC
T ss_pred cEEEEEEcCCCCCHHHH------HHHHHC-C-CCCeEEEEEEcCCChhHHHHHHHcCC-CEEEeCC
Confidence 45888999999755433 222221 2 2345677776655 667788999997 7887765
No 109
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=36.59 E-value=25 Score=35.67 Aligned_cols=40 Identities=23% Similarity=0.324 Sum_probs=33.0
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
.-+|++.|.+ .+.|++|||+++|. +...+..+||.|++.+
T Consensus 41 ~l~i~~~l~~-------~~~t~~ela~~~~~--~~~~l~r~L~~L~~~g 80 (360)
T 1tw3_A 41 TLRLVDHILA-------GARTVKALAARTDT--RPEALLRLIRHLVAIG 80 (360)
T ss_dssp HTTHHHHHHT-------TCCBHHHHHHHHTC--CHHHHHHHHHHHHHTT
T ss_pred HhCHHHHHhC-------CCCCHHHHHHHhCc--CHHHHHHHHHHHHHCC
Confidence 3467888854 37999999999998 4688999999999874
No 110
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=36.55 E-value=1.5e+02 Score=31.76 Aligned_cols=96 Identities=17% Similarity=0.289 Sum_probs=61.5
Q ss_pred CCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHH
Q 007074 188 GRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEV 267 (619)
Q Consensus 188 ~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a 267 (619)
+++++|+++| |+..|-.++. .|... .++..++. |++.-.++-+.|+ +|+|+ =-.|+..|+
T Consensus 233 ~~~~~v~I~G--gG~ig~~lA~-~L~~~---~~v~iIE~-d~~r~~~la~~l~----~~~Vi--~GD~td~~~------- 292 (461)
T 4g65_A 233 KPYRRIMIVG--GGNIGASLAK-RLEQT---YSVKLIER-NLQRAEKLSEELE----NTIVF--CGDAADQEL------- 292 (461)
T ss_dssp SCCCEEEEEC--CSHHHHHHHH-HHTTT---SEEEEEES-CHHHHHHHHHHCT----TSEEE--ESCTTCHHH-------
T ss_pred ccccEEEEEc--chHHHHHHHH-Hhhhc---CceEEEec-CHHHHHHHHHHCC----CceEE--eccccchhh-------
Confidence 5678888866 5556776664 46542 46777765 7777666666664 55544 456777665
Q ss_pred HHHHHHhccccCCEEEEEecCCc---hhhhhHHHhCCcceee
Q 007074 268 QKAFREAGLEFAKQGVAITQENS---LLDNTVRIEGWLARFP 306 (619)
Q Consensus 268 ~~~l~~~g~~~~~h~VaVT~~~s---~L~~~A~~~g~~~~F~ 306 (619)
|++.|.+...-+||+|.++. ..--+|++.|..++..
T Consensus 293 ---L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 293 ---LTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp ---HHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ---HhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 55677777788999997531 2345677777644443
No 111
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=36.49 E-value=46 Score=29.49 Aligned_cols=42 Identities=17% Similarity=0.294 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
.+.+|+..|.+. .+.|..|||+++|. +..+|...|+.|...+
T Consensus 4 ~~~~il~~L~~~------~~~~~~ela~~lg~--s~~tv~~~l~~L~~~G 45 (150)
T 2pn6_A 4 IDLRILKILQYN------AKYSLDEIAREIRI--PKATLSYRIKKLEKDG 45 (150)
T ss_dssp HHHHHHHHHTTC------TTSCHHHHHHHHTS--CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHc------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 456888889775 37999999999998 6788999999998875
No 112
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=36.45 E-value=41 Score=34.74 Aligned_cols=39 Identities=23% Similarity=0.372 Sum_probs=25.9
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHH
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGI 232 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i 232 (619)
-.|++||+||- |.+++.+.......+.+++. -|+|...+
T Consensus 12 ~~I~viGvGg~--G~n~v~~m~~~gi~gv~~i~-~ntD~q~L 50 (320)
T 1ofu_A 12 AVIKVIGVGGG--GGNAVNHMAKNNVEGVEFIC-ANTDAQAL 50 (320)
T ss_dssp CCEEEEEEHHH--HHHHHHHHHHTTCCSEEEEE-EESBTGGG
T ss_pred CEEEEECcCch--HHHHHHHHHHhCCCCCCEEE-EcCCHHHH
Confidence 35999999986 77777776665433444433 57787664
No 113
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=36.37 E-value=24 Score=32.78 Aligned_cols=43 Identities=12% Similarity=0.244 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+.+.+|+..|.+. ...|..|||+++|. ...+|...|+.|-..+
T Consensus 27 ~~d~~IL~~L~~~------~~~s~~eLA~~lgl--S~~tv~~rl~~L~~~G 69 (171)
T 2e1c_A 27 EIDKKIIKILQND------GKAPLREISKITGL--AESTIHERIRKLRESG 69 (171)
T ss_dssp HHHHHHHHHHHHC------TTCCHHHHHHHHTS--CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHc------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 4567899999875 37999999999998 6788999999998875
No 114
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=36.03 E-value=59 Score=22.21 Aligned_cols=26 Identities=8% Similarity=0.148 Sum_probs=20.9
Q ss_pred CCCHHHHHHHcCCCchhhHHHHHHHHHh
Q 007074 560 PLTIDEVAERCHTPEDIEMIYKIIAHMA 587 (619)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (619)
.+|..+||+.+|. ..-+|+.+++...
T Consensus 21 g~s~~~IA~~lgi--s~~Tv~~~~~~~~ 46 (51)
T 1tc3_C 21 NVSLHEMSRKISR--SRHCIRVYLKDPV 46 (51)
T ss_dssp TCCHHHHHHHHTC--CHHHHHHHHHCST
T ss_pred CCCHHHHHHHHCc--CHHHHHHHHhhHH
Confidence 4799999999998 5678888876543
No 115
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=35.48 E-value=2.1e+02 Score=26.02 Aligned_cols=76 Identities=20% Similarity=0.268 Sum_probs=54.0
Q ss_pred eEEEEecccC--chHHHHHHHHhcCCCCCceEEEE-eCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHH
Q 007074 192 SILSVGIGGS--ALGPQFVAEALAPDNPPLKIRFI-DNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQ 268 (619)
Q Consensus 192 ~VVvIGIGGS--~LGp~~v~~aL~~~~~~~~i~Fv-dN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~ 268 (619)
.||+.-+||- .+|..++..+|... +.+++++ .++.|+.+.+...+.+++ +|++|-+-+| ++..++.+.
T Consensus 20 ~vlla~~~gd~HdiG~~~va~~l~~~--G~eVi~lG~~~p~e~lv~aa~~~~~d-----iV~lS~~~~~--~~~~~~~~i 90 (161)
T 2yxb_A 20 KVLVAKMGLDGHDRGAKVVARALRDA--GFEVVYTGLRQTPEQVAMAAVQEDVD-----VIGVSILNGA--HLHLMKRLM 90 (161)
T ss_dssp EEEEEEESSSSCCHHHHHHHHHHHHT--TCEEECCCSBCCHHHHHHHHHHTTCS-----EEEEEESSSC--HHHHHHHHH
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHC--CCEEEECCCCCCHHHHHHHHHhcCCC-----EEEEEeechh--hHHHHHHHH
Confidence 4666667764 69999999999764 4688888 468899999999888874 4444444332 456677777
Q ss_pred HHHHHhcc
Q 007074 269 KAFREAGL 276 (619)
Q Consensus 269 ~~l~~~g~ 276 (619)
+.|++.|.
T Consensus 91 ~~L~~~g~ 98 (161)
T 2yxb_A 91 AKLRELGA 98 (161)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 77777654
No 116
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=35.10 E-value=42 Score=35.92 Aligned_cols=99 Identities=16% Similarity=0.236 Sum_probs=51.5
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEc------CCCCCHHHH-HH
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVIS------KSGGTPETR-NG 263 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViS------KSGtT~ETl-~~ 263 (619)
-.|.|||+||. |..+|-+.+.....+.++. +-|+|... |+..+. ..-+.+-. =.|+-.|.- ..
T Consensus 18 ~~IkVIGVGG~--G~NaVn~m~~~~~~gvefi-aiNTD~qa----L~~s~a---~~ki~lG~~~t~GlGAG~np~vG~ea 87 (396)
T 4dxd_A 18 ATLKVIGVGGG--GNNAVNRMIDHGMNNVEFI-AINTDGQA----LNLSKA---ESKIQIGEKLTRGLGAGANPEIGKKA 87 (396)
T ss_dssp CCEEEEEEHHH--HHHHHHHHHHHCCCSEEEE-EEESCHHH----HHTCCC---SEEEECCHHHHTTSCCTTCHHHHHHH
T ss_pred CeEEEEEECCc--HHHHHHHHHHhCCCCceEE-EEECCHHH----HhcCCC---ccEEEcCccccCCCCCCCChHHHHHH
Confidence 45889999996 7788877765443334433 36789554 444432 22222222 146666642 22
Q ss_pred HHHHHHHHHHhccccCCEEEEEec--CCc-------hhhhhHHHhCC
Q 007074 264 LLEVQKAFREAGLEFAKQGVAITQ--ENS-------LLDNTVRIEGW 301 (619)
Q Consensus 264 ~~~a~~~l~~~g~~~~~h~VaVT~--~~s-------~L~~~A~~~g~ 301 (619)
+...++.+++.- + ...+|.||. -|| .+.+++++.|.
T Consensus 88 aee~~d~Ir~~l-e-~~D~ffItagmGGGTGSGaapvIaeiake~g~ 132 (396)
T 4dxd_A 88 AEESREQIEDAI-Q-GADMVFVTSGMGGGTGTGAAPVVAKIAKEMGA 132 (396)
T ss_dssp HHHTHHHHHHHH-T-TCSEEEEEEETTSSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHH-c-CCCEEEEEeccCCCccccHHHHHHHHHHhcCC
Confidence 333333333321 1 233455553 222 46677777775
No 117
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=35.07 E-value=38 Score=34.84 Aligned_cols=56 Identities=9% Similarity=0.099 Sum_probs=35.5
Q ss_pred cEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecCCchhhhhHHHhCCcceeeccC
Q 007074 245 STLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQENSLLDNTVRIEGWLARFPMFD 309 (619)
Q Consensus 245 ~TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~~~~F~~pd 309 (619)
.-++|.+|++|+..+- ..+..+. | .....+++|-++...+.++|++.|+ +++.+|.
T Consensus 106 ~ri~vl~Sg~g~nl~~------ll~~~~~-g-~l~~~I~~Visn~~~~~~~A~~~gI-p~~~~~~ 161 (302)
T 3o1l_A 106 KRVVLMASRESHCLAD------LLHRWHS-D-ELDCDIACVISNHQDLRSMVEWHDI-PYYHVPV 161 (302)
T ss_dssp CEEEEEECSCCHHHHH------HHHHHHT-T-CSCSEEEEEEESSSTTHHHHHTTTC-CEEECCC
T ss_pred cEEEEEEeCCchhHHH------HHHHHHC-C-CCCcEEEEEEECcHHHHHHHHHcCC-CEEEcCC
Confidence 4578889999964333 2222222 2 2345777776655557788999997 7777763
No 118
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=35.06 E-value=47 Score=31.15 Aligned_cols=46 Identities=17% Similarity=0.212 Sum_probs=32.1
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAN 589 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (619)
.|++|+.++.+.. ...+.+.|..|||+++|.+.. ++...|+.|...
T Consensus 6 ~q~~il~~I~~~~-~~~g~~~s~~eia~~lgl~~~--tv~~~l~~Le~~ 51 (196)
T 3k2z_A 6 RQRKVLLFIEEFI-EKNGYPPSVREIARRFRITPR--GALLHLIALEKK 51 (196)
T ss_dssp HHHHHHHHHHHHH-HHHSSCCCHHHHHHHHTSCHH--HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH-HHhCCCCCHHHHHHHcCCCcH--HHHHHHHHHHHC
Confidence 4556666554321 012358999999999999644 799999999765
No 119
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=34.86 E-value=44 Score=35.12 Aligned_cols=40 Identities=20% Similarity=0.299 Sum_probs=25.6
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHH
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGID 233 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~ 233 (619)
..|++||+||- |.+++.+.......+.+++. -|+|...+.
T Consensus 22 ~~I~vIGvGg~--G~n~vn~m~~~gi~gv~~ia-~nTD~q~L~ 61 (353)
T 1w5f_A 22 LKIKVIGVGGA--GNNAINRMIEIGIHGVEFVA-VNTDLQVLE 61 (353)
T ss_dssp CCEEEEEEHHH--HHHHHHHHHHHCCTTEEEEE-EESCHHHHH
T ss_pred CEEEEECcCch--HHHHHHHHHHhCCCCCCEEE-EcCCHHHHh
Confidence 45999999985 67777666554333444433 577976543
No 120
>3c57_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 1.70A {Mycobacterium tuberculosis} PDB: 1zlk_A 1zlj_A
Probab=34.71 E-value=24 Score=29.44 Aligned_cols=63 Identities=21% Similarity=0.368 Sum_probs=29.2
Q ss_pred CCCCCCchHHHHHHHHHHHHH---HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCch-hh-HHHHHHHHHhcCCC
Q 007074 521 NAYHQPGVEAGKKAAGEVLAL---QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPED-IE-MIYKIIAHMAANDR 591 (619)
Q Consensus 521 NpFDQPGVE~gK~~a~~il~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 591 (619)
++|+++-.|....+...+-.| +++|+.++. ..+|..|||+.+|.+.. +. .+..+++.|..+.+
T Consensus 8 ~~~~~~~~~~~~~l~~~l~~Lt~~e~~vl~l~~--------~g~s~~eIA~~l~is~~tV~~~l~r~~~kL~~~~~ 75 (95)
T 3c57_A 8 HHHSSGLVPRGSHMQDPLSGLTDQERTLLGLLS--------EGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERR 75 (95)
T ss_dssp -------------------CCCHHHHHHHHHHH--------TTCCHHHHHHHHTCCHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCCccHHHHHHHHHHHhcCCHHHHHHHHHHH--------cCCCHHHHHHHHCcCHHHHHHHHHHHHHHHcCCCH
Confidence 467777777777766666444 666666652 37899999999999533 22 34566667766654
No 121
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=34.18 E-value=59 Score=29.18 Aligned_cols=45 Identities=11% Similarity=0.183 Sum_probs=35.5
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCC---CchhhHHHHHHHHHhcCC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHT---PEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 590 (619)
-+..|+++|.+.. .++|++||.+.+.. .-..-|||..|.-|...+
T Consensus 23 qR~~Il~~L~~~~-----~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~G 70 (145)
T 2fe3_A 23 QRHAILEYLVNSM-----AHPTADDIYKALEGKFPNMSVATVYNNLRVFRESG 70 (145)
T ss_dssp HHHHHHHHHHHCS-----SCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCC-----CCCCHHHHHHHHHHhCCCCChhhHHHHHHHHHHCC
Confidence 3557899997743 68999999999832 236789999999999875
No 122
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=33.95 E-value=29 Score=35.63 Aligned_cols=47 Identities=11% Similarity=0.221 Sum_probs=35.1
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCC---C-chhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHT---P-EDIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~ 590 (619)
.-+|++.|.+.. .|+.+.|++|||+++|. + .....+..+||+|++.+
T Consensus 46 ~lgif~~L~~~g--~pg~~~t~~eLA~~~~~~~~~~~~~~~l~rlLr~L~~~g 96 (372)
T 1fp1_D 46 DLNLFEIIAKAT--PPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYS 96 (372)
T ss_dssp HTTHHHHHHTCS--STTCCBCHHHHHTTSCGGGCCTTHHHHHHHHHHHHHHTT
T ss_pred HCChHHHHHhcC--CCCCCcCHHHHHHhcCCCCCCCcChHHHHHHHHHHhhCC
Confidence 347888887631 01223999999999996 3 36788999999999974
No 123
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=33.87 E-value=39 Score=35.68 Aligned_cols=38 Identities=26% Similarity=0.280 Sum_probs=23.5
Q ss_pred eEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHH
Q 007074 192 SILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGI 232 (619)
Q Consensus 192 ~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i 232 (619)
.|.+||+||- |.+++.+.......+.+++ +-|+|...+
T Consensus 39 ~I~vIGvGg~--G~n~v~~m~~~gi~gv~fi-a~NTD~q~L 76 (364)
T 2vap_A 39 KITVVGCGGA--GNNTITRLKMEGIEGAKTV-AINTDAQQL 76 (364)
T ss_dssp CEEEEEEHHH--HHHHHHHHHHHTCTTEEEE-EEESBHHHH
T ss_pred eEEEEeeCch--HHHHHHHHHHhCCCCCCEE-EEcCcHHHH
Confidence 4889999975 6666666554433334433 357786554
No 124
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=33.43 E-value=2e+02 Score=25.39 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=52.0
Q ss_pred eEEEEeccc--CchHHHHHHHHhcCCCCCceEEEE-eCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHH
Q 007074 192 SILSVGIGG--SALGPQFVAEALAPDNPPLKIRFI-DNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQ 268 (619)
Q Consensus 192 ~VVvIGIGG--S~LGp~~v~~aL~~~~~~~~i~Fv-dN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~ 268 (619)
.||+--+|| -.+|..++..+|+.. +.+++++ .++.|+.+.+...+.+++ +|++|-+=+| ++..++.+.
T Consensus 5 ~vvla~~~~d~HdiG~~~v~~~l~~~--G~~Vi~lG~~~p~e~~v~~a~~~~~d-----~v~lS~~~~~--~~~~~~~~i 75 (137)
T 1ccw_A 5 TIVLGVIGSDCHAVGNKILDHAFTNA--GFNVVNIGVLSPQELFIKAAIETKAD-----AILVSSLYGQ--GEIDCKGLR 75 (137)
T ss_dssp EEEEEEETTCCCCHHHHHHHHHHHHT--TCEEEEEEEEECHHHHHHHHHHHTCS-----EEEEEECSST--HHHHHTTHH
T ss_pred EEEEEeCCCchhHHHHHHHHHHHHHC--CCEEEECCCCCCHHHHHHHHHhcCCC-----EEEEEecCcC--cHHHHHHHH
Confidence 366666664 469999999999764 4688888 678899999999888763 3334333333 334566667
Q ss_pred HHHHHhcc
Q 007074 269 KAFREAGL 276 (619)
Q Consensus 269 ~~l~~~g~ 276 (619)
+.|+++|.
T Consensus 76 ~~l~~~g~ 83 (137)
T 1ccw_A 76 QKCDEAGL 83 (137)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 77777654
No 125
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=33.24 E-value=48 Score=26.73 Aligned_cols=41 Identities=12% Similarity=0.114 Sum_probs=33.5
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAN 589 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (619)
.+.+|+..|.++ .+.|..|||+.+|. ..-+|...|+.|...
T Consensus 25 ~~~~il~~l~~~------~~~s~~ela~~l~i--s~~tvs~~l~~L~~~ 65 (99)
T 3cuo_A 25 KRLLILCMLSGS------PGTSAGELTRITGL--SASATSQHLARMRDE 65 (99)
T ss_dssp HHHHHHHHHTTC------CSEEHHHHHHHHCC--CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC------CCcCHHHHHHHHCc--CHHHHHHHHHHHHHC
Confidence 466788888664 48999999999998 566899999999864
No 126
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=32.90 E-value=2.5e+02 Score=28.94 Aligned_cols=115 Identities=6% Similarity=-0.007 Sum_probs=57.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhc--CCCCCceEEEEeCCChhHHHHHHHhhCcCCC
Q 007074 167 AVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALA--PDNPPLKIRFIDNTDPAGIDHQIAQLGPELA 244 (619)
Q Consensus 167 ~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~--~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~ 244 (619)
.++++|+++. ..++++++|-|-.+ |-+..-+|+ ... .+...... -++..+--+.-+++
T Consensus 213 ~~~~~a~~~~------------~~~~~~~lG~G~~~--~~A~E~aLKl~E~s-~i~a~~~~--~~E~~HGp~ali~~--- 272 (373)
T 2aml_A 213 FYERWQEEFA------------TAPKFTAIGYGPTV--GTCKEFETKFSETV-RVPSQGLD--LEAFMHGPYLEVNP--- 272 (373)
T ss_dssp HHHHHHHHHT------------TCCCEEEEECTTHH--HHHHHHHHHHHHHT-CSCEEEEE--HHHHTTTGGGGCCT---
T ss_pred HHHHHHHHHh------------CCCcEEEEeCCCCH--HHHHHHHHHHHHHh-hhhceecc--HHHhccccHHhcCC---
Confidence 6778888875 24789999988553 222222332 111 12222221 24444444455664
Q ss_pred cEEEEEEcCCCCCHH-HHHHHHHHHHHHHHhccccCCEEEEEecCCchhhhhHHHhCCcceeeccCCCCCcchhh
Q 007074 245 STLVVVISKSGGTPE-TRNGLLEVQKAFREAGLEFAKQGVAITQENSLLDNTVRIEGWLARFPMFDWVGGRTSEM 318 (619)
Q Consensus 245 ~TLvIViSKSGtT~E-Tl~~~~~a~~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~~~~F~~pd~VGGRfSvl 318 (619)
+|.||++.-.+.+.| +..+.+++ ++ .+.++++|++++ +. + ..++.+|+.+.+.++.+
T Consensus 273 ~~~vi~l~~~~~~~~~~~~~~~~~----~~----~g~~v~~i~~~~--~~------~-~~~i~ip~~~~~~l~pl 330 (373)
T 2aml_A 273 QHRIFFLETASAVTERLVLLRDYE----SK----YTPFTYTVKFGK--GE------D-DRTLVIPTDLDEYQAPF 330 (373)
T ss_dssp TCEEEEEECCSTTHHHHHHHHHHH----TT----TCSCEEEEEESC--CS------S-TTEEEECSCCCTTTTHH
T ss_pred CCeEEEEECCCchHHHHHHHHHHH----HH----cCCcEEEEECCC--CC------C-CcEEEcCCCCcchHHHH
Confidence 454444433454432 22233332 22 268899999743 11 1 14677886566655554
No 127
>3sft_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; modified doubly-wound/fold, chemoreceptor; 2.15A {Thermotoga maritima}
Probab=32.77 E-value=21 Score=34.46 Aligned_cols=63 Identities=22% Similarity=0.233 Sum_probs=41.2
Q ss_pred EEecccCchHHHHHHHHhcCCC--CCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHH
Q 007074 195 SVGIGGSALGPQFVAEALAPDN--PPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPE 259 (619)
Q Consensus 195 vIGIGGS~LGp~~v~~aL~~~~--~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~E 259 (619)
+|+||.|.=||+++.+.|..-- -+..+.++...+|.....+-+.|+. ...+=|..-+.|..++
T Consensus 9 vV~IGaStGG~~AL~~~l~~LP~~~~~~ivivQHm~~~f~~~la~~L~~--~~~l~V~ea~dg~~l~ 73 (193)
T 3sft_A 9 IVVIGSSTGGPRSLDMIIPNLPKNFPAPIVVVQHMPPGFTKSLAMRLDS--TSELTVKEAEDGEEVK 73 (193)
T ss_dssp EEEEEECTTHHHHHTTTGGGSCTTCSSCEEEEECCCTTCHHHHHHHHHH--HCSSEEEECCTTCBCC
T ss_pred EEEEEeCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCCcHHHHHHHHhc--cCCCcEEEeCCCCEec
Confidence 6789999999999999886532 2357888888888765544455542 1334444555555543
No 128
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=32.51 E-value=1.4e+02 Score=30.92 Aligned_cols=110 Identities=13% Similarity=0.089 Sum_probs=51.7
Q ss_pred cceEEEEecccCchHHHHHHHHhcC-CCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHHHHHHHHHH
Q 007074 190 FTSILSVGIGGSALGPQFVAEALAP-DNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNGLLEVQ 268 (619)
Q Consensus 190 ~~~VVvIGIGGS~LGp~~v~~aL~~-~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ETl~~~~~a~ 268 (619)
.++++++|-|-.+ | -+..-+|+= +.. .+|-....-++..+--+.-+++ ...+|++++..-.+.-++.++++++
T Consensus 231 ~~~~~~lG~G~~~-~-~A~E~aLKl~E~s--~i~ae~~~~~E~~HGp~ali~~--~~~vi~l~~~~~~~~~~~~~~~e~~ 304 (375)
T 2zj3_A 231 QKSVLIMGRGYHY-A-TCLEGALKIKEIT--YMHSEGILAGELKHGPLALVDK--LMPVIMIIMRDHTYAKCQNALQQVV 304 (375)
T ss_dssp CSEEEEEECGGGH-H-HHHHHHHHHHHHH--CCEEEEEEGGGGGGTGGGGCST--TSCEEEEECSSTTHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCH-H-HHHHHHHHHHHHh--hhccccccHHHhccCcHHHcCC--CCeEEEEECCChhHHHHHHHHHHHH
Confidence 4789999998643 2 233223321 000 1222222224444444455654 2445555554333333444444443
Q ss_pred HHHHHhccccCCEEEEEecCCchhhhhHHHhCCcceeeccCCCCCcchhh
Q 007074 269 KAFREAGLEFAKQGVAITQENSLLDNTVRIEGWLARFPMFDWVGGRTSEM 318 (619)
Q Consensus 269 ~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~~~~F~~pd~VGGRfSvl 318 (619)
+ . +.++++|++++. ..+....+ .++.+|+ +...++.+
T Consensus 305 ~----r----g~~v~~i~~~~~--~~~~~~~~--~~i~~p~-~~~~l~pl 341 (375)
T 2zj3_A 305 A----R----QGRPVVICDKED--TETIKNTK--RTIKVPH-SVDCLQGI 341 (375)
T ss_dssp H----T----TCCCEEEEETTC--HHHHHHCS--SEEEECC-CCTTTHHH
T ss_pred H----c----CCeEEEEECCCc--hhhhhccC--cEEEcCC-CchhHHHH
Confidence 3 2 577888987532 12221111 5788885 44555443
No 129
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=32.27 E-value=67 Score=26.31 Aligned_cols=43 Identities=12% Similarity=0.203 Sum_probs=33.9
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEee
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAE 596 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (619)
+.+|+..| + .+.|+.|||+.+|. ..-+|++.|+.|... |++..
T Consensus 33 r~~Il~~L-~-------~~~~~~eLa~~l~i--s~~tv~~~L~~L~~~--Glv~~ 75 (96)
T 1y0u_A 33 RRKILRML-D-------KGRSEEEIMQTLSL--SKKQLDYHLKVLEAG--FCIER 75 (96)
T ss_dssp HHHHHHHH-H-------TTCCHHHHHHHHTC--CHHHHHHHHHHHHHT--TSEEE
T ss_pred HHHHHHHH-c-------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHC--CCEEE
Confidence 45788888 4 37999999999998 667899999999876 44433
No 130
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=32.27 E-value=1.9e+02 Score=26.77 Aligned_cols=59 Identities=15% Similarity=0.121 Sum_probs=34.5
Q ss_pred eEEEEecccCchHHHHHHHHhcCCCCCceEEEEeC-------------CChhHHHHHHHhhCcCCCcEEEEEEcCCC
Q 007074 192 SILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDN-------------TDPAGIDHQIAQLGPELASTLVVVISKSG 255 (619)
Q Consensus 192 ~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN-------------~DP~~i~~~l~~L~~~l~~TLvIViSKSG 255 (619)
.|+|.|-. +.+|..++...+... .+++.++. .|++.+.++++.+... -+.+|..+.-+.
T Consensus 3 ~vlVtGas-g~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 3 VIAITGSA-SGIGAALKELLARAG---HTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGV-LDGLVCCAGVGV 74 (255)
T ss_dssp EEEEETTT-SHHHHHHHHHHHHTT---CEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTC-CSEEEECCCCCT
T ss_pred EEEEeCCC-cHHHHHHHHHHHhCC---CEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCC-ccEEEECCCCCC
Confidence 57777744 568888887776542 35665532 2345666777665111 267777665443
No 131
>3gva_A Alkyltransferase-like protein 1; alkylated DNA damage repair, DNA damage, DNA repair, DNA- binding, DNA binding protein; 2.00A {Schizosaccharomyces pombe} PDB: 3gx4_X* 3gyh_X* 4enj_A* 4enk_A* 4enm_A* 4enn_A* 4hdu_A* 4hdv_A*
Probab=32.13 E-value=60 Score=28.88 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHH
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAH 585 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (619)
+.|++|.+.|.+= +.++..|-.+||+.+|.|...-+|-..|.+
T Consensus 5 ~Fq~~Vw~~l~~I---P~G~v~TYg~IA~~~G~p~aaRaVG~Al~~ 47 (116)
T 3gva_A 5 EFYTKVYDAVCEI---PYGKVSTYGEIARYVGMPSYARQVGQAMKH 47 (116)
T ss_dssp HHHHHHHHHHTTS---CTTCBBCHHHHHHHTTCTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHhcC---CCCCeEeHHHHHHHhCCCCcHHHHHHHHHh
Confidence 4688999999763 689999999999999999888888877764
No 132
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=31.74 E-value=2.7e+02 Score=25.52 Aligned_cols=82 Identities=11% Similarity=0.203 Sum_probs=41.9
Q ss_pred ceEEEEecccCchHHHHHHHHh-cCCC------------------CCceEEE--EeCCChhHHHHHHHhhCcCCCcEEEE
Q 007074 191 TSILSVGIGGSALGPQFVAEAL-APDN------------------PPLKIRF--IDNTDPAGIDHQIAQLGPELASTLVV 249 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL-~~~~------------------~~~~i~F--vdN~DP~~i~~~l~~L~~~l~~TLvI 249 (619)
+.|+|+|-. +.+|..++...+ .... ...++.+ .|-.|++.+.++++.+ +.+|.
T Consensus 6 k~vlVtGas-g~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----d~vv~ 79 (221)
T 3r6d_A 6 XYITILGAA-GQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNA-----EVVFV 79 (221)
T ss_dssp SEEEEESTT-SHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTC-----SEEEE
T ss_pred EEEEEEeCC-cHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCC-----CEEEE
Confidence 458887743 457777776666 3211 0112333 2556677777777644 45555
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec
Q 007074 250 VISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ 287 (619)
Q Consensus 250 ViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~ 287 (619)
.+.- +..+ .+.+.+.+++.+ .+|+|.+++
T Consensus 80 ~ag~--~n~~----~~~~~~~~~~~~---~~~iv~iSs 108 (221)
T 3r6d_A 80 GAME--SGSD----MASIVKALSRXN---IRRVIGVSM 108 (221)
T ss_dssp SCCC--CHHH----HHHHHHHHHHTT---CCEEEEEEE
T ss_pred cCCC--CChh----HHHHHHHHHhcC---CCeEEEEee
Confidence 5432 1222 233333333332 368888887
No 133
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=31.18 E-value=29 Score=35.10 Aligned_cols=37 Identities=16% Similarity=0.050 Sum_probs=30.2
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 544 RVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
.|++.|.+ +.|++|||+++|. +...+..+||+|++.+
T Consensus 48 gif~~l~~--------~~t~~elA~~~~~--~~~~l~rlLr~L~~~g 84 (352)
T 3mcz_A 48 KLFDLTQT--------GRTPAEVAASFGM--VEGKAAILLHALAALG 84 (352)
T ss_dssp THHHHTTS--------CBCHHHHHHHHTC--CHHHHHHHHHHHHHTT
T ss_pred ChHHHhCC--------CCCHHHHHHHhCc--ChHHHHHHHHHHHHCC
Confidence 57777732 8999999999999 4456999999999974
No 134
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=30.64 E-value=56 Score=28.45 Aligned_cols=42 Identities=14% Similarity=0.229 Sum_probs=34.7
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
.+.+|+..|.++ .+.|..|||+++|. +..+|...|+.|...+
T Consensus 5 ~~~~il~~L~~~------~~~~~~ela~~lg~--s~~tv~~~l~~L~~~G 46 (141)
T 1i1g_A 5 RDKIILEILEKD------ARTPFTEIAKKLGI--SETAVRKRVKALEEKG 46 (141)
T ss_dssp HHHHHHHHHHHC------TTCCHHHHHHHHTS--CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 356788888765 37899999999998 7788999999998764
No 135
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=30.62 E-value=2.9e+02 Score=26.17 Aligned_cols=61 Identities=21% Similarity=0.278 Sum_probs=39.9
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCC-CCceEEE-----EeCCChhHHHHHHHhhCcCCCcEEEEEEcCCC
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDN-PPLKIRF-----IDNTDPAGIDHQIAQLGPELASTLVVVISKSG 255 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~-~~~~i~F-----vdN~DP~~i~~~l~~L~~~l~~TLvIViSKSG 255 (619)
..|+|+|-.| .+|..++...+.... ...+... .|-.|++.+.++++..++ +.+|..++.++
T Consensus 7 ~~vlVtGatG-~iG~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~---d~Vih~A~~~~ 73 (319)
T 4b8w_A 7 MRILVTGGSG-LVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQP---THVIHLAAMVG 73 (319)
T ss_dssp CEEEEETCSS-HHHHHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHSCC---SEEEECCCCCC
T ss_pred CeEEEECCCc-HHHHHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhhcCC---CEEEECceecc
Confidence 4688887554 478888777665432 1122222 255688999999988654 68888887765
No 136
>2z99_A Putative uncharacterized protein; winged helix domain, cell cycle, cell division, chromosome partition, cytoplasm; 2.30A {Mycobacterium tuberculosis}
Probab=30.52 E-value=87 Score=30.85 Aligned_cols=49 Identities=22% Similarity=0.297 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHh----cCCCceEee
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMA----ANDRALIAE 596 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 596 (619)
+...|+++|=-.. +|+|+++||+.++.+ .+.|-.+|..|. ..+||+.+.
T Consensus 16 l~~~iEAlLf~a~-----epvs~~~La~~l~~~--~~~v~~~l~~L~~~y~~~~rGiel~ 68 (219)
T 2z99_A 16 LKRVLEALLLVID-----TPVTADALAAATEQP--VYRVAAKLQLMADELTGRDSGIDLR 68 (219)
T ss_dssp HHHHHHHHHHHCS-----SCBCHHHHHHHHTSC--HHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcC-----CCCCHHHHHHHHCcC--HHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 4567888887753 799999999999873 344555666554 457888764
No 137
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=30.15 E-value=1.4e+02 Score=26.74 Aligned_cols=87 Identities=22% Similarity=0.297 Sum_probs=45.1
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCC-----------------CCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcC
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDN-----------------PPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISK 253 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~-----------------~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSK 253 (619)
..|+|+|-.| .+|..++...+.... .+..++..|-.|++.+.++++.+ +.+|..+.-
T Consensus 4 ~~ilVtGatG-~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----d~vi~~a~~ 77 (206)
T 1hdo_A 4 KKIAIFGATG-QTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQ-----DAVIVLLGT 77 (206)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTC-----SEEEECCCC
T ss_pred CEEEEEcCCc-HHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCC-----CEEEECccC
Confidence 4588877543 577777766654311 11223333556788887777654 566666654
Q ss_pred CCC-CHHHHHHHHHHHH---HHHHhccccCCEEEEEec
Q 007074 254 SGG-TPETRNGLLEVQK---AFREAGLEFAKQGVAITQ 287 (619)
Q Consensus 254 SGt-T~ETl~~~~~a~~---~l~~~g~~~~~h~VaVT~ 287 (619)
... ..+. .++...+. ++.+.+ .+|+|.+++
T Consensus 78 ~~~~~~~~-~n~~~~~~~~~~~~~~~---~~~~v~~Ss 111 (206)
T 1hdo_A 78 RNDLSPTT-VMSEGARNIVAAMKAHG---VDKVVACTS 111 (206)
T ss_dssp TTCCSCCC-HHHHHHHHHHHHHHHHT---CCEEEEECC
T ss_pred CCCCCccc-hHHHHHHHHHHHHHHhC---CCeEEEEee
Confidence 332 1111 22222222 222322 368888886
No 138
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=30.00 E-value=2e+02 Score=26.92 Aligned_cols=85 Identities=12% Similarity=0.186 Sum_probs=46.8
Q ss_pred cceEEEEecccCchHHHHHHHHhcCC-C-------C--------CceEEE--EeCCChhHHHHHHHhhCcCCCcEEEEEE
Q 007074 190 FTSILSVGIGGSALGPQFVAEALAPD-N-------P--------PLKIRF--IDNTDPAGIDHQIAQLGPELASTLVVVI 251 (619)
Q Consensus 190 ~~~VVvIGIGGS~LGp~~v~~aL~~~-~-------~--------~~~i~F--vdN~DP~~i~~~l~~L~~~l~~TLvIVi 251 (619)
-+.|+|+|-.| .+|..++...+... . . ..++.+ .|-.|++.+.++++.+ +.+|..+
T Consensus 23 mk~vlVtGatG-~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----D~vv~~a 96 (236)
T 3qvo_A 23 MKNVLILGAGG-QIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQ-----DIVYANL 96 (236)
T ss_dssp CEEEEEETTTS-HHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTC-----SEEEEEC
T ss_pred ccEEEEEeCCc-HHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCC-----CEEEEcC
Confidence 35688877443 47877776665432 1 0 012333 3557888888888765 4666555
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec
Q 007074 252 SKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ 287 (619)
Q Consensus 252 SKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~ 287 (619)
.-. .. ....+.+.+.+++.+ .+|+|.+++
T Consensus 97 ~~~--~~--~~~~~~~~~~~~~~~---~~~iV~iSS 125 (236)
T 3qvo_A 97 TGE--DL--DIQANSVIAAMKACD---VKRLIFVLS 125 (236)
T ss_dssp CST--TH--HHHHHHHHHHHHHTT---CCEEEEECC
T ss_pred CCC--ch--hHHHHHHHHHHHHcC---CCEEEEEec
Confidence 422 22 122333344444433 368998887
No 139
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=28.71 E-value=3e+02 Score=26.19 Aligned_cols=57 Identities=18% Similarity=0.304 Sum_probs=38.3
Q ss_pred eEEEEecccCchHHHHHHHHhcCCCCCceEEEEe-----CCChhHHHHHHHhhCcCCCcEEEEEEcCCC
Q 007074 192 SILSVGIGGSALGPQFVAEALAPDNPPLKIRFID-----NTDPAGIDHQIAQLGPELASTLVVVISKSG 255 (619)
Q Consensus 192 ~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~Fvd-----N~DP~~i~~~l~~L~~~l~~TLvIViSKSG 255 (619)
.|+|+|-.| .+|..++...+.. +-+++.++ -.|++.+.++++..++ +.+|..++.+.
T Consensus 7 ~ilVtGatG-~iG~~l~~~L~~~---g~~V~~~~r~~~D~~d~~~~~~~~~~~~~---d~vi~~a~~~~ 68 (287)
T 3sc6_A 7 RVIITGANG-QLGKQLQEELNPE---EYDIYPFDKKLLDITNISQVQQVVQEIRP---HIIIHCAAYTK 68 (287)
T ss_dssp EEEEESTTS-HHHHHHHHHSCTT---TEEEEEECTTTSCTTCHHHHHHHHHHHCC---SEEEECCCCCC
T ss_pred EEEEECCCC-HHHHHHHHHHHhC---CCEEEEecccccCCCCHHHHHHHHHhcCC---CEEEECCcccC
Confidence 688887543 4777777655543 23666653 3568888888887655 67777777665
No 140
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=28.50 E-value=81 Score=28.51 Aligned_cols=46 Identities=17% Similarity=0.396 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCC---CchhhHHHHHHHHHhcCC
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERCHT---PEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 590 (619)
.-+..|+++|.+.. .++|++||.+.+.. .-..-|||..|.-|...+
T Consensus 27 ~qR~~IL~~l~~~~-----~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~G 75 (150)
T 2xig_A 27 KQREEVVSVLYRSG-----THLSPEEITHSIRQKDKNTSISSVYRILNFLEKEN 75 (150)
T ss_dssp HHHHHHHHHHHHCS-----SCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCC-----CCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCC
Confidence 34557889998754 58999999998832 236789999999999875
No 141
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=28.50 E-value=2.3e+02 Score=27.89 Aligned_cols=61 Identities=21% Similarity=0.279 Sum_probs=37.9
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCC-------------C----------CceEEEE--eCCChhHHHHHHHhhCcCCCc
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDN-------------P----------PLKIRFI--DNTDPAGIDHQIAQLGPELAS 245 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~-------------~----------~~~i~Fv--dN~DP~~i~~~l~~L~~~l~~ 245 (619)
..|+|.|-.| .+|..++...+.... . ..++.++ |=.|++.+.++++..+. +
T Consensus 25 ~~vlVtGatG-~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~---d 100 (346)
T 4egb_A 25 MNILVTGGAG-FIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDV---Q 100 (346)
T ss_dssp EEEEEETTTS-HHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTC---C
T ss_pred CeEEEECCcc-HHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCC---C
Confidence 4688888654 477777766654210 0 0134443 66789999999988544 5
Q ss_pred EEEEEEcCCC
Q 007074 246 TLVVVISKSG 255 (619)
Q Consensus 246 TLvIViSKSG 255 (619)
.+|..++.+.
T Consensus 101 ~Vih~A~~~~ 110 (346)
T 4egb_A 101 VIVNFAAESH 110 (346)
T ss_dssp EEEECCCCC-
T ss_pred EEEECCcccc
Confidence 7777776654
No 142
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=28.47 E-value=1.5e+02 Score=30.77 Aligned_cols=61 Identities=13% Similarity=0.042 Sum_probs=37.1
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCCC--------------------------CceEEEE--eCCChhHHHHHHHhhCcC
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDNP--------------------------PLKIRFI--DNTDPAGIDHQIAQLGPE 242 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~~--------------------------~~~i~Fv--dN~DP~~i~~~l~~L~~~ 242 (619)
+.|+|.|.+|+ +|..++.+.+..... +.++.++ |=.|++.+..+++.-++
T Consensus 36 k~vLVTGatG~-IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~- 113 (399)
T 3nzo_A 36 SRFLVLGGAGS-IGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY- 113 (399)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC-
T ss_pred CEEEEEcCChH-HHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC-
Confidence 46999998876 798888777654210 0234443 44566666655554444
Q ss_pred CCcEEEEEEcCCC
Q 007074 243 LASTLVVVISKSG 255 (619)
Q Consensus 243 l~~TLvIViSKSG 255 (619)
+.+|..+..+.
T Consensus 114 --D~Vih~Aa~~~ 124 (399)
T 3nzo_A 114 --DYVLNLSALKH 124 (399)
T ss_dssp --SEEEECCCCCC
T ss_pred --CEEEECCCcCC
Confidence 67777766543
No 143
>1j5y_A Transcriptional regulator, biotin repressor famil; structural genomics, TM1602, BIOT repressor family, JCSG, conserved hypothetical protein; 2.30A {Thermotoga maritima} SCOP: a.4.5.1 d.94.2.1
Probab=28.11 E-value=1.1e+02 Score=28.43 Aligned_cols=44 Identities=20% Similarity=0.274 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcC
Q 007074 539 LALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAN 589 (619)
Q Consensus 539 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (619)
.+.+.+|+.+|.+.. .++|+.|||+++|. +.-+|+.=|+.|...
T Consensus 20 ~~R~~~Il~~L~~~~-----~~~s~~eLa~~l~v--S~~Ti~rdi~~L~~~ 63 (187)
T 1j5y_A 20 QERLKSIVRILERSK-----EPVSGAQLAEELSV--SRQVIVQDIAYLRSL 63 (187)
T ss_dssp HHHHHHHHHHHHHCS-----SCBCHHHHHHHHTS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCcCHHHHHHHHCc--CHHHHHHHHHHHHHC
Confidence 355678889998643 47999999999998 677888888888764
No 144
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=27.78 E-value=1.3e+02 Score=24.11 Aligned_cols=58 Identities=9% Similarity=0.039 Sum_probs=40.0
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEe-ecCCCCCcceeEEc
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIA-EGSCGSPRSIKVYL 609 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 609 (619)
+-+|+..|... .+.|..+||+.+|. ..-+|+..|+.|... |++. ..+..+.....+..
T Consensus 18 ~~~iL~~L~~~------~~~~~~ela~~l~i--s~~tvs~~l~~L~~~--gli~~~~~~~~~r~~~~~l 76 (100)
T 1ub9_A 18 RLGIMIFLLPR------RKAPFSQIQKVLDL--TPGNLDSHIRVLERN--GLVKTYKVIADRPRTVVEI 76 (100)
T ss_dssp HHHHHHHHHHH------SEEEHHHHHHHTTC--CHHHHHHHHHHHHHT--TSEEEEEECSSSCEEEEEE
T ss_pred HHHHHHHHHhc------CCcCHHHHHHHHCc--CHHHHHHHHHHHHHC--CCEEEEecCCCcceEEEEE
Confidence 55678878654 37999999999998 556899999999886 4443 33333444444443
No 145
>2jpc_A SSRB; DNA binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium}
Probab=27.75 E-value=79 Score=23.31 Aligned_cols=39 Identities=18% Similarity=0.431 Sum_probs=25.2
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHH----HHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYK----IIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 590 (619)
+.+|+.++.+ .+|..|||+.+|.+ ..+|.. +.+.|..++
T Consensus 3 e~~vl~l~~~--------g~s~~eIA~~l~is--~~tV~~~~~~~~~kl~~~~ 45 (61)
T 2jpc_A 3 ERQVLKLIDE--------GYTNHGISEKLHIS--IKTVETHRMNMMRKLQVHK 45 (61)
T ss_dssp HHHHHHHHHT--------SCCSHHHHHHTCSC--HHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHc--------CCCHHHHHHHhCCC--HHHHHHHHHHHHHHHCCCC
Confidence 4567777544 57999999999994 344444 444444443
No 146
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=27.63 E-value=39 Score=34.78 Aligned_cols=42 Identities=19% Similarity=0.298 Sum_probs=33.1
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEee
Q 007074 544 RVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAE 596 (619)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (619)
+|++.|.+ .+.|++|||+++|. +...+..+||+|++. |+..+
T Consensus 62 glf~~l~~-------g~~t~~eLA~~~g~--~~~~l~rlLr~L~~~--g~l~~ 103 (369)
T 3gwz_A 62 GVPELLQE-------GPRTATALAEATGA--HEQTLRRLLRLLATV--GVFDD 103 (369)
T ss_dssp TTGGGGTT-------SCEEHHHHHHHHTC--CHHHHHHHHHHHHHT--TSSEE
T ss_pred ChhhhhcC-------CCCCHHHHHHHHCc--CHHHHHHHHHHHHhC--CCEEE
Confidence 67777754 38999999999999 455799999999996 44443
No 147
>2kif_A O6-methylguanine-DNA methyltransferase; methods development, solution structure, DNA base repair methylguanine methyltransferase; NMR {Vibrio parahaemolyticus AQ3810} PDB: 2kim_A
Probab=27.53 E-value=68 Score=28.12 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHH
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAH 585 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (619)
+.|++|.+.|.+ -+.++..|-.+||+.+|.|...-+|-..+.+
T Consensus 3 ~F~~~V~~~l~~---IP~G~v~TYg~iA~~~G~p~aaRaVG~Al~~ 45 (108)
T 2kif_A 3 QFLVQIFAVIHQ---IPKGKVSTYGEIAKMAGYPGYARHVGKALGN 45 (108)
T ss_dssp HHHHHHHHHHTT---CCTTCBEEHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhc---CCCCCcEeHHHHHHHhCCCCcHHHHHHHHHh
Confidence 357899999976 3689999999999999999988888887764
No 148
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=27.49 E-value=3.4e+02 Score=24.91 Aligned_cols=22 Identities=18% Similarity=0.382 Sum_probs=13.0
Q ss_pred eEEEEecccCchHHHHHHHHhcC
Q 007074 192 SILSVGIGGSALGPQFVAEALAP 214 (619)
Q Consensus 192 ~VVvIGIGGS~LGp~~v~~aL~~ 214 (619)
.|+|.|- ++.+|-.++...+..
T Consensus 5 ~vlItGa-sggiG~~la~~l~~~ 26 (250)
T 1yo6_A 5 SVVVTGA-NRGIGLGLVQQLVKD 26 (250)
T ss_dssp EEEESSC-SSHHHHHHHHHHHTC
T ss_pred EEEEecC-CchHHHHHHHHHHhc
Confidence 4666663 356777666665543
No 149
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=26.92 E-value=4.9e+02 Score=26.01 Aligned_cols=102 Identities=9% Similarity=0.136 Sum_probs=65.4
Q ss_pred eEEEEeccc--CchHHHHHHHH--------hcCCCCCceEEEE-eCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCC-HH
Q 007074 192 SILSVGIGG--SALGPQFVAEA--------LAPDNPPLKIRFI-DNTDPAGIDHQIAQLGPELASTLVVVISKSGGT-PE 259 (619)
Q Consensus 192 ~VVvIGIGG--S~LGp~~v~~a--------L~~~~~~~~i~Fv-dN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT-~E 259 (619)
.||+--++| =.+|-.++... |.... +.+++++ .++.++.+.+...+.+++ +|.+|-+=++ ..
T Consensus 122 ~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~-G~eVi~LG~~vp~e~iv~aa~e~~~d-----~VglS~l~t~~~~ 195 (262)
T 1xrs_B 122 VVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYE-MIDAYNLGSQVANEDFIKKAVELEAD-----VLLVSQTVTQKNV 195 (262)
T ss_dssp EEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCT-TEEEEECCSSBCHHHHHHHHHHTTCS-----EEEEECCCCTTSH
T ss_pred EEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcC-CcEEEECCCCCCHHHHHHHHHHcCCC-----EEEEEeecCCccc
Confidence 355555554 47999999877 76541 4688887 678899999988888775 6666665555 33
Q ss_pred HHHHHHHHHHHHHHhccccCCEEEEEecCCchhhhhHHHhCC
Q 007074 260 TRNGLLEVQKAFREAGLEFAKQGVAITQENSLLDNTVRIEGW 301 (619)
Q Consensus 260 Tl~~~~~a~~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~ 301 (619)
++.+++.+.+.|++.|.... -.|.|-... .-.+++++-|.
T Consensus 196 ~~~~~~~~i~~L~~~g~~~~-i~vivGG~~-~~~~~a~~iGa 235 (262)
T 1xrs_B 196 HIQNMTHLIELLEAEGLRDR-FVLLCGGPR-INNEIAKELGY 235 (262)
T ss_dssp HHHHHHHHHHHHHHTTCGGG-SEEEEECTT-CCHHHHHTTTC
T ss_pred hHHHHHHHHHHHHhcCCCCC-CEEEEECCc-CCHHHHHHcCC
Confidence 78888888888887764321 223343321 11345555554
No 150
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=26.55 E-value=44 Score=26.57 Aligned_cols=44 Identities=11% Similarity=0.178 Sum_probs=34.9
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCC--chhhHHHHHHHHHhcCC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTP--EDIEMIYKIIAHMAAND 590 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 590 (619)
.+..|+.+|.+. .+.|+.||++.++.. =..-+|+.+|..|...+
T Consensus 10 ~e~~vL~~L~~~------~~~t~~ei~~~l~~~~~~s~~Tv~~~l~rL~~kG 55 (82)
T 1p6r_A 10 AELEVMKVIWKH------SSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKG 55 (82)
T ss_dssp HHHHHHHHHHTS------SSEEHHHHHHHHHHHSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC------CCCCHHHHHHHHhhcCCccHHHHHHHHHHHHHCC
Confidence 456788888763 489999999999741 14679999999999874
No 151
>1fse_A GERE; helix-turn-helix DNA-binding protein transcriptional regulat transcription; 2.05A {Bacillus subtilis} SCOP: a.4.6.2
Probab=25.98 E-value=97 Score=23.54 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=24.0
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHH
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAH 585 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (619)
.+.+|+.++. ..+|..|||+.+|.+ ..+|+..+..
T Consensus 15 ~e~~il~~~~--------~g~s~~eIA~~l~is--~~tV~~~~~~ 49 (74)
T 1fse_A 15 REREVFELLV--------QDKTTKEIASELFIS--EKTVRNHISN 49 (74)
T ss_dssp HHHHHHHHHT--------TTCCHHHHHHHHTSC--HHHHHHHHHH
T ss_pred HHHHHHHHHH--------cCCCHHHHHHHHCCC--HHHHHHHHHH
Confidence 4567777763 257999999999994 4555554443
No 152
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=25.88 E-value=4.4e+02 Score=25.78 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=37.5
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCC---------CC--------ceEEE--EeCCChhHHHHHHHhhCcCCCcEEEEEE
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDN---------PP--------LKIRF--IDNTDPAGIDHQIAQLGPELASTLVVVI 251 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~---------~~--------~~i~F--vdN~DP~~i~~~l~~L~~~l~~TLvIVi 251 (619)
..|+|.|-. ..+|..++...+.... .. .++.+ .|-.|++.+.++++.++. +.+|..+
T Consensus 21 ~~vlVTGas-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~---D~vih~A 96 (330)
T 2pzm_A 21 MRILITGGA-GCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKP---THVVHSA 96 (330)
T ss_dssp CEEEEETTT-SHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCC---SEEEECC
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCC---CEEEECC
Confidence 358887754 3578777766654210 00 12333 355678888888885543 6788877
Q ss_pred cCCCC
Q 007074 252 SKSGG 256 (619)
Q Consensus 252 SKSGt 256 (619)
+.+..
T Consensus 97 ~~~~~ 101 (330)
T 2pzm_A 97 AAYKD 101 (330)
T ss_dssp CCCSC
T ss_pred ccCCC
Confidence 76554
No 153
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=25.74 E-value=1.3e+02 Score=31.87 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=21.3
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeC
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDN 226 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN 226 (619)
++|.+||+|||+++. .+.|... +.++...|.
T Consensus 10 k~v~viG~G~sG~s~---A~~l~~~--G~~V~~~D~ 40 (451)
T 3lk7_A 10 KKVLVLGLARSGEAA---ARLLAKL--GAIVTVNDG 40 (451)
T ss_dssp CEEEEECCTTTHHHH---HHHHHHT--TCEEEEEES
T ss_pred CEEEEEeeCHHHHHH---HHHHHhC--CCEEEEEeC
Confidence 579999999998763 4555432 246776665
No 154
>1chd_A CHEB methylesterase; chemotaxis protein, serine hydrolase, carboxyl methylesteras; 1.75A {Salmonella typhimurium} SCOP: c.40.1.1
Probab=25.47 E-value=59 Score=31.57 Aligned_cols=64 Identities=16% Similarity=0.156 Sum_probs=40.6
Q ss_pred EEecccCchHHHHHHHHhcCCCCC-ceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHHH
Q 007074 195 SVGIGGSALGPQFVAEALAPDNPP-LKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPET 260 (619)
Q Consensus 195 vIGIGGS~LGp~~v~~aL~~~~~~-~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~ET 260 (619)
+|+||.|.=||+++.+.|..--.+ ..+.++...+|.....+-+.|+.. ..+=|..-..|..+|+
T Consensus 12 vV~IGaStGG~~AL~~~l~~LP~~~~~ivivQHm~~~f~~~la~~L~~~--~~l~V~ea~dg~~l~p 76 (203)
T 1chd_A 12 LIAIGASTGGTEAIRHVLQPLPLSSPAVIITQHMPPGFTRSFAERLNKL--CQISVKEAEDGERVLP 76 (203)
T ss_dssp EEEEEECTTHHHHHHHHHTTCCTTSCEEEEEECCCTTHHHHHHHHHHHH--CSSEEEECCTTCBCCT
T ss_pred EEEEEeCCCCHHHHHHHHHhCCCCCCeEEEEECCCCchHHHHHHHHcCc--CCCcEEECCCCCEecC
Confidence 778899999999999999764222 236666888887655555555421 3333444455555443
No 155
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=25.20 E-value=1.1e+02 Score=25.34 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=32.3
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+.+|+..|.. .+.|+.+||+.+|. ..-+|...|+.|...+
T Consensus 23 r~~IL~~L~~-------~~~~~~ela~~l~i--s~~tv~~~l~~L~~~g 62 (114)
T 2oqg_A 23 RWEILTELGR-------ADQSASSLATRLPV--SRQAIAKHLNALQACG 62 (114)
T ss_dssp HHHHHHHHHH-------SCBCHHHHHHHSSS--CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHc-------CCCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 5678888843 36899999999998 5668999999998753
No 156
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=24.73 E-value=77 Score=29.18 Aligned_cols=44 Identities=11% Similarity=0.224 Sum_probs=35.2
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCC-----CchhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHT-----PEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 590 (619)
+..|+++|.+.. .++|++||.+.+.. .=+.-|||..|.-|...+
T Consensus 35 R~~IL~~L~~~~-----~h~sA~eI~~~l~~~~~~~~is~aTVYRtL~~L~e~G 83 (162)
T 4ets_A 35 REVLLKTLYHSD-----THYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAE 83 (162)
T ss_dssp HHHHHHHHHSCC-----SCBCHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCC-----CCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHCC
Confidence 567888887754 69999999988742 235789999999999875
No 157
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=24.64 E-value=3.6e+02 Score=25.67 Aligned_cols=59 Identities=15% Similarity=0.262 Sum_probs=37.9
Q ss_pred cceEEEEecccCchHHHHHHHHhcCCCCCceEEEEe-----CCChhHHHHHHHhhCcCCCcEEEEEEcCCC
Q 007074 190 FTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFID-----NTDPAGIDHQIAQLGPELASTLVVVISKSG 255 (619)
Q Consensus 190 ~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~Fvd-----N~DP~~i~~~l~~L~~~l~~TLvIViSKSG 255 (619)
=+.|+|.|-.| .+|..++...+.. +-+++.++ -.|++.+.++++..+. +.+|..++.+.
T Consensus 12 ~~~vlVtGatG-~iG~~l~~~L~~~---g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~---d~vih~A~~~~ 75 (292)
T 1vl0_A 12 HMKILITGANG-QLGREIQKQLKGK---NVEVIPTDVQDLDITNVLAVNKFFNEKKP---NVVINCAAHTA 75 (292)
T ss_dssp CEEEEEESTTS-HHHHHHHHHHTTS---SEEEEEECTTTCCTTCHHHHHHHHHHHCC---SEEEECCCCCC
T ss_pred cceEEEECCCC-hHHHHHHHHHHhC---CCeEEeccCccCCCCCHHHHHHHHHhcCC---CEEEECCccCC
Confidence 36688877554 4787777666543 23566653 3567888888876544 57777776543
No 158
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=24.44 E-value=5.8e+02 Score=26.01 Aligned_cols=115 Identities=8% Similarity=0.004 Sum_probs=55.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcCCCCCceEEEEeCCChhHHHHHHHhhCcCCCcE
Q 007074 167 AVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAST 246 (619)
Q Consensus 167 ~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~T 246 (619)
.++++++++. ..++++++|-|-.+ |-+.--||+=. .-..+|-..---.+..+--++-+++ +|
T Consensus 197 ~~~~~a~~~~------------~~~~~~~lGrG~~~--~~A~E~ALKlk-E~s~i~ae~~~a~E~~HGP~alid~---~~ 258 (352)
T 3g68_A 197 WIERNKEKLV------------NSKEIRIIGHSDIY--GDTLEAALKLL-ETMRIPVTGYEFEEFIHGIYNAINS---DS 258 (352)
T ss_dssp HHHHTHHHHH------------TCCEEEEEECGGGH--HHHHHHHHHHH-HHHCSCEEEEEHHHHHTTGGGGCCT---TE
T ss_pred HHHHHHHHHh------------CCCcEEEEeCCCCH--HHHHHHHHHHH-HHhcccccccchhhccccchheeCC---Cc
Confidence 4566666665 35789999999764 22333333210 0001121111113444444555664 55
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEecCCchhhhhHHHhCCcceeeccCCCCCcchh
Q 007074 247 LVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQENSLLDNTVRIEGWLARFPMFDWVGGRTSE 317 (619)
Q Consensus 247 LvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~~~~F~~pd~VGGRfSv 317 (619)
.||++.-.+.|. +..+.+.+++. +.++++||+++.. +. ..+.+|..+..-++.
T Consensus 259 pvi~~~~~~~~~-----~~~~~~~~~~~----g~~v~~i~~~~~~--------~~-~~~~~p~~~~~~~~p 311 (352)
T 3g68_A 259 TIFILDTGKEPR-----VTKMIDVLSGW----TENVFAIGRDVTE--------ND-KNLKIDITDNPYYQT 311 (352)
T ss_dssp EEEEEECSCCTT-----HHHHHHHHHTT----CSCEEEEESSCCC--------ST-TCEECCCCSCTTGGG
T ss_pred eEEEEECCchHH-----HHHHHHHHHHc----CCeEEEEecCCCC--------Cc-eeEEeCCCCchhHhH
Confidence 555543233331 12233333333 6789999975321 22 467777644333433
No 159
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=24.42 E-value=2.7e+02 Score=25.41 Aligned_cols=58 Identities=21% Similarity=0.336 Sum_probs=32.6
Q ss_pred eEEEEecccCchHHHHHHHHhcCCC---------------CCceEEEEeCCC-hhHHHHHHHhhCcCCCcEEEEEEcCCC
Q 007074 192 SILSVGIGGSALGPQFVAEALAPDN---------------PPLKIRFIDNTD-PAGIDHQIAQLGPELASTLVVVISKSG 255 (619)
Q Consensus 192 ~VVvIGIGGS~LGp~~v~~aL~~~~---------------~~~~i~FvdN~D-P~~i~~~l~~L~~~l~~TLvIViSKSG 255 (619)
+|+|+|-.| .+|..++...+.... .+++++-.|-.| ++.+.++++.+ +.+|..+.-+.
T Consensus 2 ~ilItGatG-~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~-----d~vi~~ag~~~ 75 (219)
T 3dqp_A 2 KIFIVGSTG-RVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGM-----DAIINVSGSGG 75 (219)
T ss_dssp EEEEESTTS-HHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTC-----SEEEECCCCTT
T ss_pred eEEEECCCC-HHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCC-----CEEEECCcCCC
Confidence 477877443 578777776664321 112222235566 77766666543 56766665544
No 160
>1x3u_A Transcriptional regulatory protein FIXJ; helix-turn-helix; NMR {Sinorhizobium meliloti}
Probab=23.96 E-value=1.8e+02 Score=22.40 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHH
Q 007074 538 VLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIA 584 (619)
Q Consensus 538 il~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (619)
+=+.+.+|+.++- ..+|..|||+.+|.+ ..+|...+.
T Consensus 17 L~~~e~~vl~l~~--------~g~s~~eIA~~l~is--~~tV~~~~~ 53 (79)
T 1x3u_A 17 LSERERQVLSAVV--------AGLPNKSIAYDLDIS--PRTVEVHRA 53 (79)
T ss_dssp HCHHHHHHHHHHT--------TTCCHHHHHHHTTSC--HHHHHHHHH
T ss_pred CCHHHHHHHHHHH--------cCCCHHHHHHHHCcC--HHHHHHHHH
Confidence 3344666776652 378999999999984 445554443
No 161
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=23.81 E-value=1.1e+02 Score=29.65 Aligned_cols=45 Identities=13% Similarity=0.347 Sum_probs=34.4
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEee
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAE 596 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (619)
-+|+.+|.+.. .++|+.|||+++|. ..-+++.+|+.|... |++..
T Consensus 11 l~iL~~l~~~~-----~~~~~~ela~~~gl--~~stv~r~l~~L~~~--G~v~~ 55 (249)
T 1mkm_A 11 FEILDFIVKNP-----GDVSVSEIAEKFNM--SVSNAYKYMVVLEEK--GFVLR 55 (249)
T ss_dssp HHHHHHHHHCS-----SCBCHHHHHHHTTC--CHHHHHHHHHHHHHT--TSEEE
T ss_pred HHHHHHHHhCC-----CCCCHHHHHHHHCc--CHHHHHHHHHHHHHC--CcEEE
Confidence 35667776532 47999999999999 556899999999875 55544
No 162
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=23.43 E-value=1.1e+02 Score=27.41 Aligned_cols=42 Identities=7% Similarity=0.144 Sum_probs=30.2
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 544 RVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+++-.|.... +..+.|+++||+.++.| ...+.+||..|...+
T Consensus 15 ~~L~~La~~~---~~~~~s~~~IA~~~~i~--~~~l~kil~~L~~aG 56 (143)
T 3t8r_A 15 TLMISLAKKE---GQGCISLKSIAEENNLS--DLYLEQLVGPLRNAG 56 (143)
T ss_dssp HHHHHHHTTT---TSCCEEHHHHHHHTTCC--HHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCC---CCCCcCHHHHHHHHCcC--HHHHHHHHHHHHHCC
Confidence 4555665532 33589999999999994 456778888887664
No 163
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=23.39 E-value=90 Score=24.65 Aligned_cols=40 Identities=10% Similarity=0.229 Sum_probs=33.8
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcC
Q 007074 543 KRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAN 589 (619)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (619)
.++++.++... .-+.++.+|++.|- +-|.||..||.|+.-
T Consensus 13 ~~lL~yIr~sG-----GildI~~~a~kygV--~kdeV~~~LrrLe~K 52 (59)
T 2xvc_A 13 RELLDYIVNNG-----GFLDIEHFSKVYGV--EKQEVVKLLEALKNK 52 (59)
T ss_dssp HHHHHHHHHTT-----SEEEHHHHHHHHCC--CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcC-----CEEeHHHHHHHhCC--CHHHHHHHHHHHHHC
Confidence 46778887754 68999999999998 667899999999874
No 164
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=22.77 E-value=1.5e+02 Score=27.23 Aligned_cols=42 Identities=10% Similarity=0.175 Sum_probs=29.1
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 544 RVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+++-.|.... +..+.|+++||+.++. ....+-+||..|...+
T Consensus 31 r~L~~LA~~~---~~~~~s~~eIA~~~~i--~~~~l~kil~~L~~aG 72 (159)
T 3lwf_A 31 TITLELAKRI---GDGPISLRSIAQDKNL--SEHYLEQLIGPLRNAG 72 (159)
T ss_dssp HHHHHHHHTT---TSCCBCHHHHHHHHTC--CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcC---CCCCcCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 4444554421 3358999999999999 4456778888887664
No 165
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=22.65 E-value=93 Score=27.71 Aligned_cols=46 Identities=17% Similarity=0.255 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCC---CchhhHHHHHHHHHhcCC
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERCHT---PEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 590 (619)
.-+..|+++|.+.. .++|++||.+.+.. .=..-|||..|.-|...+
T Consensus 14 ~qR~~Il~~L~~~~-----~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~G 62 (139)
T 3mwm_A 14 RQRAAVSAALQEVE-----EFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAG 62 (139)
T ss_dssp HHHHHHHHHHTTCS-----SCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCC-----CCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCC
Confidence 44567888887754 59999999998842 236889999999999876
No 166
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=22.40 E-value=63 Score=31.49 Aligned_cols=55 Identities=13% Similarity=0.180 Sum_probs=34.2
Q ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEE-ecC-CchhhhhHHHhCCcceeeccC
Q 007074 246 TLVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAI-TQE-NSLLDNTVRIEGWLARFPMFD 309 (619)
Q Consensus 246 TLvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaV-T~~-~s~L~~~A~~~g~~~~F~~pd 309 (619)
-+.|.+|.+|+..+.+. +..+. | .....+++| |++ +....+.|++.|+ +++.++.
T Consensus 4 riavl~Sg~Gsnl~ali------~~~~~-~-~l~~eI~~Visn~~~a~v~~~A~~~gI-p~~~~~~ 60 (211)
T 3p9x_A 4 RVAIFASGSGTNAEAII------QSQKA-G-QLPCEVALLITDKPGAKVVERVKVHEI-PVCALDP 60 (211)
T ss_dssp EEEEECCTTCHHHHHHH------HHHHT-T-CCSSEEEEEEESCSSSHHHHHHHTTTC-CEEECCG
T ss_pred EEEEEEeCCchHHHHHH------HHHHc-C-CCCcEEEEEEECCCCcHHHHHHHHcCC-CEEEeCh
Confidence 46788999997654433 22222 2 223456655 553 5677788999997 7776653
No 167
>1je8_A Nitrate/nitrite response regulator protein NARL; protein-DNA complex, two-component response regulator, helix-turn-helix, DNA bending; 2.12A {Escherichia coli} SCOP: a.4.6.2 PDB: 1zg1_A 1zg5_A
Probab=22.32 E-value=1.2e+02 Score=24.33 Aligned_cols=40 Identities=13% Similarity=0.229 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHH----HHHHHhcC
Q 007074 540 ALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYK----IIAHMAAN 589 (619)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 589 (619)
+.+++|+.++. ..+|..|||+.+|.+ ..+|.. +++.|..+
T Consensus 24 ~~e~~vl~l~~--------~g~s~~eIA~~l~is--~~tV~~~l~r~~~kL~~~ 67 (82)
T 1je8_A 24 PRERDILKLIA--------QGLPNKMIARRLDIT--ESTVKVHVKHMLKKMKLK 67 (82)
T ss_dssp HHHHHHHHHHT--------TTCCHHHHHHHHTSC--HHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHH--------cCCCHHHHHHHHCcC--HHHHHHHHHHHHHHHcCC
Confidence 44667777752 368999999999994 444444 44445443
No 168
>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB: 1bib_A* 1hxd_A* 2ewn_A*
Probab=21.65 E-value=93 Score=31.71 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=34.0
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAN 589 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (619)
.+.+|+.+|.++ ...|.+|||+.+|. +..+|++-|+.|...
T Consensus 6 r~~~Il~~L~~~------~~~s~~eLa~~l~v--S~~ti~r~l~~L~~~ 46 (321)
T 1bia_A 6 VPLKLIALLANG------EFHSGEQLGETLGM--SRAAINKHIQTLRDW 46 (321)
T ss_dssp HHHHHHHHHTTS------SCBCHHHHHHHHTS--CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcC------CCcCHHHHHHHHCC--CHHHHHHHHHHHHhC
Confidence 456788888764 48999999999998 777999999998764
No 169
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=21.59 E-value=4.6e+02 Score=25.23 Aligned_cols=58 Identities=12% Similarity=0.115 Sum_probs=36.8
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCCCCceEEEEe------CCChhHHHHHHHhhCcCCCcEEEEEEcCCC
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDNPPLKIRFID------NTDPAGIDHQIAQLGPELASTLVVVISKSG 255 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~~~~~i~Fvd------N~DP~~i~~~l~~L~~~l~~TLvIViSKSG 255 (619)
..|+|+|-.| .+|..++...+... .+++.++ -.|++.+.++++..+. +.+|..++.+.
T Consensus 4 ~~ilVtGatG-~iG~~l~~~L~~~g---~~v~~~~r~~~~D~~d~~~~~~~~~~~~~---d~vih~a~~~~ 67 (321)
T 1e6u_A 4 QRVFIAGHRG-MVGSAIRRQLEQRG---DVELVLRTRDELNLLDSRAVHDFFASERI---DQVYLAAAKVG 67 (321)
T ss_dssp EEEEEETTTS-HHHHHHHHHHTTCT---TEEEECCCTTTCCTTCHHHHHHHHHHHCC---SEEEECCCCCC
T ss_pred CEEEEECCCc-HHHHHHHHHHHhCC---CeEEEEecCccCCccCHHHHHHHHHhcCC---CEEEEcCeecC
Confidence 3588877443 47877776666532 2455543 2467788888875554 67777777654
No 170
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=21.56 E-value=1.7e+02 Score=24.51 Aligned_cols=40 Identities=8% Similarity=0.204 Sum_probs=32.0
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+.+|+..|.+ .+.|+.|||+.+|. ..-+|.+.|+.|...+
T Consensus 27 r~~IL~~L~~-------~~~s~~eLa~~lgi--s~stvs~~L~~L~~~G 66 (108)
T 2kko_A 27 RLQILDLLAQ-------GERAVEAIATATGM--NLTTASANLQALKSGG 66 (108)
T ss_dssp THHHHHHHTT-------CCEEHHHHHHHHTC--CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHc-------CCcCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 4578888864 37899999999998 5678899999998753
No 171
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=21.51 E-value=75 Score=32.78 Aligned_cols=87 Identities=13% Similarity=0.040 Sum_probs=44.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHhccccCCEEEEEec-----CCchhhhhHHHhCCcceeeccCCCCC--------
Q 007074 247 LVVVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQ-----ENSLLDNTVRIEGWLARFPMFDWVGG-------- 313 (619)
Q Consensus 247 LvIViSKSGtT~ETl~~~~~a~~~l~~~g~~~~~h~VaVT~-----~~s~L~~~A~~~g~~~~F~~pd~VGG-------- 313 (619)
+|+.++-|....|+ ++..++++|+ .++|+|.-.. ....|.++|++.|. .|-+...|||
T Consensus 85 vVVe~T~~~~~~~p--a~~~~~~aL~-----aGkhVVtaNK~~la~~~~eL~~lA~~~g~--~~~~Ea~vg~giPii~~l 155 (325)
T 3ing_A 85 LLVDCTPASRDGVR--EYSLYRMAFE-----SGMNVVTANKSGLANKWHDIMDSANQNSK--YIRYEATVAGGVPLFSVL 155 (325)
T ss_dssp EEEECCCCCSSSHH--HHHHHHHHHH-----TTCEEEECCCHHHHHHHHHHHHHHHHHTC--CEECGGGSSTTSCCHHHH
T ss_pred EEEECCCCccccch--HHHHHHHHHH-----CCCeEEEcCchhHHHHHHHHHHHHHHcCC--eEEEEeeecccCHHHHHH
Confidence 45555444344444 2233344333 2788764321 13467788888875 3444444443
Q ss_pred -------c-------chhhhHhhHHHHHhcCCCHHHHHHHHHHH
Q 007074 314 -------R-------TSEMSAVGLLPAALQGIDVREMLAGASLM 343 (619)
Q Consensus 314 -------R-------fSvlSaVGLlPaal~GiDi~~lL~GA~~m 343 (619)
| +|=.+..=|--+ -.|.+|++.|+-|++.
T Consensus 156 ~~~l~g~~I~~i~Gi~nGT~nyil~~m-~~g~~f~~~l~~Aq~~ 198 (325)
T 3ing_A 156 DYSILPSKVKRFRGIVSSTINYVIRNM-ANGRSLRDVVDDAIKK 198 (325)
T ss_dssp HHTCTTCCEEEEEEECCHHHHHHHHHH-HTTCCHHHHHHHHHHH
T ss_pred HHHhhCCCeeEEEEEEEeeeeEEeecc-cCCCCHHHHHHHHHHc
Confidence 2 222222222122 3588899999988875
No 172
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=21.20 E-value=99 Score=32.20 Aligned_cols=110 Identities=11% Similarity=0.034 Sum_probs=52.5
Q ss_pred CcceEEEEecccCchHHHHHHHHhcC-CCCCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHH-HHHHHHH
Q 007074 189 RFTSILSVGIGGSALGPQFVAEALAP-DNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPE-TRNGLLE 266 (619)
Q Consensus 189 ~~~~VVvIGIGGS~LGp~~v~~aL~~-~~~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~E-Tl~~~~~ 266 (619)
..++++++|-|-.+ |-+.--||+= +...+....... .+..+--++-+++ +|.||++.-.+.+.| ++.++++
T Consensus 226 ~~~~~~~lGrG~~~--~~A~E~ALKlkE~s~i~ae~~~a--~E~~HGP~alid~---~~pvi~~~~~d~~~~k~~~~~~e 298 (372)
T 3tbf_A 226 DKEHTIFLGRGLYY--PIAIEGALKLKEISYIHAEAYPS--GELKHGPLALVDK---NMPIVAVVPNDELLDKTLSNLQE 298 (372)
T ss_dssp TCCEEEEEECTTHH--HHHHHHHHHHHHHHCCEEEEEEG--GGTTTTTTTTCCT---TCEEEEEECSSTTHHHHHHHHHH
T ss_pred ccCCEEEEecCcCH--HHHHHHHHHHHHHhCcCcceeeH--HHhcCccHhhcCC---CCeEEEEecCCchHHHHHHHHHH
Confidence 35789999999653 2233334421 000112222211 3333333444554 455544433444444 4566666
Q ss_pred HHHHHHHhccccCCEEEEEecCCchhhhhHHHhCCcceeeccCCCCCcchh
Q 007074 267 VQKAFREAGLEFAKQGVAITQENSLLDNTVRIEGWLARFPMFDWVGGRTSE 317 (619)
Q Consensus 267 a~~~l~~~g~~~~~h~VaVT~~~s~L~~~A~~~g~~~~F~~pd~VGGRfSv 317 (619)
+++ .+.++++||+++.. ........ .++.+|+ +..-++.
T Consensus 299 ~~~--------rg~~vi~i~~~~~~--~~~~~~~~-~~i~~p~-~~~~l~p 337 (372)
T 3tbf_A 299 VHA--------RGGKLILFVDKAVK--ERVNFDNS-IVLELDA-GHDFSAP 337 (372)
T ss_dssp HHH--------TTCEEEEEEEGGGG--GGCCCTTC-EEEEECC-CSTTHHH
T ss_pred HHH--------cCCeEEEEECCCcc--cccccccc-eEEECCC-CchhHhH
Confidence 654 26889999984320 11101122 5677874 4444443
No 173
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=20.91 E-value=1.2e+02 Score=27.76 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=29.3
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 544 RVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
+++-+|... ++.+.|.++||+.++.| ...|.||+..|...+
T Consensus 16 r~l~~La~~----~~~~~s~~~IA~~~~is--~~~l~kil~~L~~aG 56 (162)
T 3k69_A 16 HSILYLDAH----RDSKVASRELAQSLHLN--PVMIRNILSVLHKHG 56 (162)
T ss_dssp HHHHHHHTT----TTSCBCHHHHHHHHTSC--GGGTHHHHHHHHHTT
T ss_pred HHHHHHHhC----CCCCcCHHHHHHHHCcC--HHHHHHHHHHHHHCC
Confidence 566666653 34689999999999994 345667777776654
No 174
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=20.80 E-value=1.1e+02 Score=24.64 Aligned_cols=30 Identities=13% Similarity=0.233 Sum_probs=26.3
Q ss_pred CCCCHHHHHHHcCCCchhhHHHHHHHHHhcCC
Q 007074 559 EPLTIDEVAERCHTPEDIEMIYKIIAHMAAND 590 (619)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (619)
.+.|..|||+.+|. ..-+|+.+|+.|...+
T Consensus 35 ~~~t~~ela~~l~i--s~~tv~~~l~~L~~~g 64 (109)
T 2d1h_A 35 KPITSEELADIFKL--SKTTVENSLKKLIELG 64 (109)
T ss_dssp SCEEHHHHHHHHTC--CHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHCc--CHHHHHHHHHHHHHCC
Confidence 47999999999998 6678999999998764
No 175
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=20.69 E-value=5.2e+02 Score=26.85 Aligned_cols=19 Identities=21% Similarity=0.482 Sum_probs=11.4
Q ss_pred eEEEEecccCchHHHHHHHHh
Q 007074 192 SILSVGIGGSALGPQFVAEAL 212 (619)
Q Consensus 192 ~VVvIGIGGS~LGp~~v~~aL 212 (619)
.|+++|-| ++|..++....
T Consensus 3 kVlIiGaG--giG~~ia~~L~ 21 (405)
T 4ina_A 3 KVLQIGAG--GVGGVVAHKMA 21 (405)
T ss_dssp EEEEECCS--HHHHHHHHHHH
T ss_pred EEEEECCC--HHHHHHHHHHH
Confidence 57788774 46655554444
No 176
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=20.62 E-value=2.6e+02 Score=23.48 Aligned_cols=58 Identities=17% Similarity=0.267 Sum_probs=41.8
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEeecCCCCCcceeEE
Q 007074 542 QKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAEGSCGSPRSIKVY 608 (619)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (619)
+-+|+..|... .+.|..+||+.++. ..-+|..+|+.|...+ -|..+.+..+.....+.
T Consensus 33 ~~~iL~~l~~~------~~~~~~ela~~l~i--s~~~vs~~l~~L~~~g-li~~~~~~~d~r~~~~~ 90 (142)
T 3bdd_A 33 RYSILQTLLKD------APLHQLALQERLQI--DRAAVTRHLKLLEESG-YIIRKRNPDNQREVLVW 90 (142)
T ss_dssp HHHHHHHHHHH------CSBCHHHHHHHHTC--CHHHHHHHHHHHHHTT-SEEEEECSSSTTCEEEE
T ss_pred HHHHHHHHHhC------CCCCHHHHHHHHCC--CHHHHHHHHHHHHHCC-CEEecCCCCCCCeeEEE
Confidence 45677778764 37999999999998 6668999999999863 23355555555554444
No 177
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=20.55 E-value=2.1e+02 Score=29.15 Aligned_cols=112 Identities=6% Similarity=0.044 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCcceEEEEecccCchHHHHHHHHhcC-CCCCceEEEEeCCChhHHHHHHHhhC
Q 007074 162 ETTLDAVRKFADEVVSGKIKPPSSPEGRFTSILSVGIGGSALGPQFVAEALAP-DNPPLKIRFIDNTDPAGIDHQIAQLG 240 (619)
Q Consensus 162 ~~~l~~I~~fa~~i~~G~~~~~~g~~~~~~~VVvIGIGGS~LGp~~v~~aL~~-~~~~~~i~FvdN~DP~~i~~~l~~L~ 240 (619)
.+.++++-+..+++.+..|+.....=...++++++|-|-.+ |-+.--+|+= +...+...... -.+..+--++-++
T Consensus 176 ~~~l~~lp~~~~~~l~~~~~~~a~~~~~~~~~~~lG~G~~~--~~A~E~ALKlkE~~~i~ae~~~--~~E~~HGP~alv~ 251 (334)
T 3hba_A 176 VEAVNSLPQALQAAVDAEPQLRAGSLTDVKNLVVLGRGFGY--AVSKEIALKLKEVCAIHAEAFS--SAEFLHGPVTLVE 251 (334)
T ss_dssp HHHHHHHHHHHHHHHHSCCSCCGGGTTTCCEEEEEECTHHH--HHHHHHHHHHHHHHCCEEEEEE--TTTCC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcCH--HHHHHHHHHHHHHcCcceEEec--HHhhccchHHhcC
Confidence 34445555555555433443322100245789999999654 2222223321 00111222221 2344444445555
Q ss_pred cCCCcEEEEEEcCCCCCHH-HHHHHHHHHHHHHHhccccCCEEEEEecC
Q 007074 241 PELASTLVVVISKSGGTPE-TRNGLLEVQKAFREAGLEFAKQGVAITQE 288 (619)
Q Consensus 241 ~~l~~TLvIViSKSGtT~E-Tl~~~~~a~~~l~~~g~~~~~h~VaVT~~ 288 (619)
+ +|.||++.-.+.+.| +..+++++++ . +.++++|+++
T Consensus 252 ~---~~~vi~~~~~~~~~~~~~~~~~e~~~----~----g~~v~~i~~~ 289 (334)
T 3hba_A 252 K---KLSILDVCIRDESYGSHVEQIANVKQ----R----GANLIHLHQT 289 (334)
T ss_dssp ------CEEEEECCSTTHHHHHHHHHHHHH----T----TCCEEEEECS
T ss_pred C---CceEEEEecCchhHHHHHHHHHHHHH----c----CCeEEEEECC
Confidence 4 555555544566654 4455555544 2 6789999874
No 178
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=20.53 E-value=4.5e+02 Score=25.68 Aligned_cols=62 Identities=19% Similarity=0.301 Sum_probs=37.2
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCC----------CC-------ceEEE--EeCCChhHHHHHHHhhCcCCCcEEEEEE
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDN----------PP-------LKIRF--IDNTDPAGIDHQIAQLGPELASTLVVVI 251 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~----------~~-------~~i~F--vdN~DP~~i~~~l~~L~~~l~~TLvIVi 251 (619)
..|+|.|-.| .+|..++...+.... .. .++.+ .|-.|++.+.++++.... +.+|..+
T Consensus 22 ~~vlVTGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~---D~vih~A 97 (333)
T 2q1w_A 22 KKVFITGICG-QIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQP---DAVVHTA 97 (333)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCC---SEEEECC
T ss_pred CEEEEeCCcc-HHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCC---cEEEECc
Confidence 4588887543 478777766654210 00 12333 366778888888887433 5777777
Q ss_pred cCCCC
Q 007074 252 SKSGG 256 (619)
Q Consensus 252 SKSGt 256 (619)
..+..
T Consensus 98 ~~~~~ 102 (333)
T 2q1w_A 98 ASYKD 102 (333)
T ss_dssp CCCSC
T ss_pred eecCC
Confidence 65543
No 179
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=20.53 E-value=86 Score=30.40 Aligned_cols=44 Identities=14% Similarity=0.263 Sum_probs=33.7
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcCCCceEee
Q 007074 544 RVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAANDRALIAE 596 (619)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (619)
+|+.+|.+.. .++|+.|||+++|. .--+++.+|..|... |++.+
T Consensus 10 ~iL~~l~~~~-----~~~s~~ela~~~gl--~~stv~r~l~~L~~~--G~v~~ 53 (241)
T 2xrn_A 10 SIMRALGSHP-----HGLSLAAIAQLVGL--PRSTVQRIINALEEE--FLVEA 53 (241)
T ss_dssp HHHHHHHTCT-----TCEEHHHHHHHTTS--CHHHHHHHHHHHHTT--TSEEE
T ss_pred HHHHHHHhCC-----CCCCHHHHHHHHCc--CHHHHHHHHHHHHHC--CCEEE
Confidence 5666665532 47999999999999 556899999999875 55544
No 180
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=20.41 E-value=3.1e+02 Score=26.88 Aligned_cols=88 Identities=18% Similarity=0.146 Sum_probs=49.8
Q ss_pred ceEEEEecccCchHHHHHHHHhcCCC-----------CCceEEEEeCCChhHHHHHHHhhCcCCCcEEEEEEcCCCCCHH
Q 007074 191 TSILSVGIGGSALGPQFVAEALAPDN-----------PPLKIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPE 259 (619)
Q Consensus 191 ~~VVvIGIGGS~LGp~~v~~aL~~~~-----------~~~~i~FvdN~DP~~i~~~l~~L~~~l~~TLvIViSKSGtT~E 259 (619)
+.|+|.|-.| .+|..++...+.... .++.++..|=.|++.+.++++.+ +.+|..++.+..+.+
T Consensus 20 ~~vlVtGatG-~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----d~vih~A~~~~~~~~ 93 (347)
T 4id9_A 20 HMILVTGSAG-RVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGV-----SAVLHLGAFMSWAPA 93 (347)
T ss_dssp -CEEEETTTS-HHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTC-----SEEEECCCCCCSSGG
T ss_pred CEEEEECCCC-hHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCC-----CEEEECCcccCcchh
Confidence 5688887543 578887777665421 11233333556788888887744 577877777666554
Q ss_pred HH-----HHH---HHHHHHHHHhccccCCEEEEEec
Q 007074 260 TR-----NGL---LEVQKAFREAGLEFAKQGVAITQ 287 (619)
Q Consensus 260 Tl-----~~~---~~a~~~l~~~g~~~~~h~VaVT~ 287 (619)
.. .|. ..+.+++.+.+ .+++|.+++
T Consensus 94 ~~~~~~~~nv~~~~~ll~a~~~~~---~~~~V~~SS 126 (347)
T 4id9_A 94 DRDRMFAVNVEGTRRLLDAASAAG---VRRFVFASS 126 (347)
T ss_dssp GHHHHHHHHTHHHHHHHHHHHHTT---CSEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcC---CCeEEEECC
Confidence 31 111 12222222222 468999887
No 181
>3rkx_A Biotin-[acetyl-COA-carboxylase] ligase; biotin protein ligase, 3 domains, enzyme DNA binding, biotin coupling domains; 2.10A {Staphylococcus aureus} PDB: 3rir_A* 3rkw_A 3rky_A* 3v7c_A* 3v7s_A* 3v8j_A 3v7r_A 3v8k_A* 3v8l_A* 4dq2_A*
Probab=20.33 E-value=1.7e+02 Score=29.93 Aligned_cols=52 Identities=13% Similarity=0.210 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHcCCCchhhHHHHHHHHHhcC--------CCceEeecC
Q 007074 541 LQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDIEMIYKIIAHMAAN--------DRALIAEGS 598 (619)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 598 (619)
.+++|+++|.++. +...|.++||+.+|. +-.+|.|-++.|... ++||.+...
T Consensus 4 ~~~~iL~~L~~~~----g~~~Sg~eLa~~lgv--Sr~aV~k~i~~L~~~G~~i~~~~~~GY~L~~~ 63 (323)
T 3rkx_A 4 YSQDVLQLLYKNK----PNYISGQSIAESLNI--SRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQL 63 (323)
T ss_dssp HHHHHHHHHHHHT----TSCBCHHHHHHHHTS--CHHHHHHHHHHHHHTTCEEEEETTTEEEEEEC
T ss_pred HHHHHHHHHHhCC----CCccCHHHHHHHHCC--CHHHHHHHHHHHHhcCCeEEEeCCCeEEEecC
Confidence 3568899996532 368999999999998 677888888888643 356666553
Done!