BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007075
(619 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356500631|ref|XP_003519135.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Glycine
max]
gi|401721241|gb|AFP99901.1| putative UDP-N-acetylglucosamin [Glycine max]
Length = 928
Score = 1154 bits (2986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/618 (87%), Positives = 579/618 (93%), Gaps = 1/618 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ+AL
Sbjct: 301 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQLALG 360
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG I+LAI
Sbjct: 361 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGDIALAI 420
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYEQCLKIDPDSRNAGQNRLLAMNYI+EG+DDKLFEAHRDWG+RFMRLYSQ+TSWDN+K
Sbjct: 421 NAYEQCLKIDPDSRNAGQNRLLAMNYIDEGNDDKLFEAHRDWGRRFMRLYSQFTSWDNSK 480
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLVIGYVSPDYFTHSVSYFIEAPL+YHDY NYKVVVYSAVVKADAKTIRFREKV+K
Sbjct: 481 DPERPLVIGYVSPDYFTHSVSYFIEAPLLYHDYTNYKVVVYSAVVKADAKTIRFREKVLK 540
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGGIW+DIYG DEKKVA MVRED++DIL+ELTGHTANNKLGMMAC+PAPVQVTWIGYPNT
Sbjct: 541 KGGIWKDIYGTDEKKVADMVREDQVDILIELTGHTANNKLGMMACRPAPVQVTWIGYPNT 600
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDS ADPPETKQKHVEEL+RLP+CFLCYTPSPEAGPVCPTPAL+NGF+TF
Sbjct: 601 TGLPTIDYRITDSQADPPETKQKHVEELVRLPDCFLCYTPSPEAGPVCPTPALSNGFVTF 660
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWA+ILCA+PNSRLVVKCKPFCCDSVR RFLSTLE+LGLE LRVD
Sbjct: 661 GSFNNLAKITPKVLQVWAKILCAIPNSRLVVKCKPFCCDSVRQRFLSTLEKLGLEPLRVD 720
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 721 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 780
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+KVGL +LIAKNEDEYV+LA++LASD++AL NLRMSLR+LMSKSP+C+G F LGLESTY
Sbjct: 781 SKVGLGNLIAKNEDEYVKLAVKLASDISALQNLRMSLRELMSKSPLCNGAKFTLGLESTY 840
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEPS-KFSEPTKIIFAKEGSPGSVMPNGFNQAS 599
R MW RYCKGDVP+LKRME+LQQ V S +PS K SEPT+ + EGSPGSV NGF+
Sbjct: 841 RKMWRRYCKGDVPALKRMELLQQPVSSNDPSNKNSEPTRATNSSEGSPGSVKANGFSSTQ 900
Query: 600 PSMLNLSNIEENGVQLNQ 617
P LN N EENG LN
Sbjct: 901 PPKLNFVNCEENGGSLNH 918
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++DMA+ FYE A P AEA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 193 YNLGVVYSEMMQYDMALTFYEKAASERPMYAEAYCNMGVIYKNRGDLEAAITCYERCLAV 252
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G +D +KA+ N YA+A NLGV Y +
Sbjct: 253 SPNFEIAKNNMAIALTDLGTKVKLEGDIDHGVAFYKKALYYNWHYADAMYNLGVAYGEML 312
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 313 KFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRDNLDKAVECYQ 356
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y + + A Y+ A +P A L ++ D N + ++ Y
Sbjct: 121 GILYKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFE 180
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL I P+++ + NLGVVY+ + D A EKA + P YAEAY N+GV+Y++ G +
Sbjct: 181 ALKIDPHYAPAYYNLGVVYSEMMQYDMALTFYEKAASERPMYAEAYCNMGVIYKNRGDLE 240
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
AI YE+CL + P+ A N +A+ + G KL E D G F + + Y +W
Sbjct: 241 AAITCYERCLAVSPNFEIAKNNMAIALTDL--GTKVKL-EGDIDHGVAFYK-KALYYNW 295
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 6 VAYGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
V+Y +L KF A+ YE + EA G+ + ++ A E + A+ +
Sbjct: 50 VSYANILRSRNKFVDALALYERVLESDGGNVEALIGKGICLQMQNMGRLAFESFAEAIRL 109
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AG 114
P + +L + G++Y +G++ AAE +KA+ +P+Y A L ++ D AG
Sbjct: 110 DPQNACALTHCGILYKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAG 169
Query: 115 SISLAIDAYEQCLKIDP 131
+ I Y + LKIDP
Sbjct: 170 NTQEGIQKYFEALKIDP 186
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ L ++L G+ +Q A E +AI +P A
Sbjct: 55 ILRSRNKFVDALALYERVLESDGGNVEALIGKGICLQMQNMGRLAFESFAEAIRLDPQNA 114
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A + G+LY+D G + A ++Y++ L++DP + A +
Sbjct: 115 CALTHCGILYKDEGRLVEAAESYQKALQVDPSYKAAAE 152
>gi|225440809|ref|XP_002281883.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Vitis vinifera]
gi|297740152|emb|CBI30334.3| unnamed protein product [Vitis vinifera]
Length = 914
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/613 (88%), Positives = 573/613 (93%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ+ALS
Sbjct: 301 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQLALS 360
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG+IS+AI
Sbjct: 361 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIVANPTYAEAYNNLGVLYRDAGNISMAI 420
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYEQCLKIDPDSRNAGQNRLLAMNYINEG+DDKLFEAHRDWG+RFMRLY QYTSWDN K
Sbjct: 421 EAYEQCLKIDPDSRNAGQNRLLAMNYINEGNDDKLFEAHRDWGRRFMRLYPQYTSWDNPK 480
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLV+GYVSPDYFTHSVSYFIEAPLV HDY NYKVVVYSAVVKADAKTIRFR+KV+K
Sbjct: 481 DPERPLVVGYVSPDYFTHSVSYFIEAPLVNHDYANYKVVVYSAVVKADAKTIRFRDKVLK 540
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+GG+WRDIYGIDEKKVA+MVREDK+DILVELTGHTANNKLGMMAC+PAPVQVTWIGYPNT
Sbjct: 541 RGGVWRDIYGIDEKKVASMVREDKVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNT 600
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDSLAD P+T QKHVEEL+RLPECFLCY PSPEAGPV PTPAL+NGFITF
Sbjct: 601 TGLPTIDYRITDSLADLPDTSQKHVEELVRLPECFLCYMPSPEAGPVSPTPALSNGFITF 660
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR RFLSTLEQLGLESLRVD
Sbjct: 661 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRQRFLSTLEQLGLESLRVD 720
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAY+LMDISLDTFPYAGTTTTCESL+MGVPCVTMAGSVHAHNVGVSLL
Sbjct: 721 LLPLILLNHDHMQAYALMDISLDTFPYAGTTTTCESLFMGVPCVTMAGSVHAHNVGVSLL 780
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
KVGL L+AK EDEYVQLALQLASD+TAL+NLRMSLRDLMSKSPVC+G NFAL LESTY
Sbjct: 781 NKVGLGRLVAKTEDEYVQLALQLASDITALSNLRMSLRDLMSKSPVCNGPNFALALESTY 840
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGSPGSVMPNGFNQASP 600
R+MW RYCKGDVPSL+RME+LQQ+ E K EPTKI +++ S GS+ NG NQ
Sbjct: 841 RSMWRRYCKGDVPSLRRMEILQQENSEEPVVKLPEPTKITNSRDDSSGSIKTNGLNQVPS 900
Query: 601 SMLNLSNIEENGV 613
SML S EENGV
Sbjct: 901 SMLKHSTSEENGV 913
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ YE A P AEA N+GVI+K+R +L+ A+ CY+ L++
Sbjct: 193 YNLGVVYSEMMQYDTALSCYEKAALERPMYAEAYCNMGVIFKNRGDLESAITCYERCLAV 252
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 253 SPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYYKKALYYNWHYADAMYNLGVAYGEML 312
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 313 KFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRDNLDKAVECYQ 356
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 7/151 (4%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVE 53
+ +LG+ Y + + A Y+ A + A L ++ D N + ++
Sbjct: 117 LTHLGILYKDEGRLLEAAESYDKALRIDSSYKPAAECLAIVLTDLGTSLKLAGNTQEGIQ 176
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
Y AL I P+++ + NLGVVY+ + D A EKA P YAEAY N+GV++++
Sbjct: 177 KYYEALKIDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAALERPMYAEAYCNMGVIFKNR 236
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
G + AI YE+CL + P+ A N +A+
Sbjct: 237 GDLESAITCYERCLAVSPNFEIAKNNMAIAL 267
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV++ +
Sbjct: 178 YYE-ALKIDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAALERPMYAEAYCNMGVIFKNR 236
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G +++A E+ +A +P + A NN+ + D G+
Sbjct: 237 GDLESAITCYERCLAVSPNFEIAKNNMAIALTDLGT 272
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + EA G+ + ++ A E + A+ P +L +L
Sbjct: 61 KFADALAMYENILEKDNGNVEAHIGKGICLQMQNMGRLAFESFSEAIRQDPQNLCALTHL 120
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G++ AAE +KA+ + +Y A L ++ D AG+ I Y +
Sbjct: 121 GILYKDEGRLLEAAESYDKALRIDSSYKPAAECLAIVLTDLGTSLKLAGNTQEGIQKYYE 180
Query: 126 CLKIDP 131
LKIDP
Sbjct: 181 ALKIDP 186
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ L ++ G+ +Q A E +AI +P
Sbjct: 55 ILRSRNKFADALAMYENILEKDNGNVEAHIGKGICLQMQNMGRLAFESFSEAIRQDPQNL 114
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A +LG+LY+D G + A ++Y++ L+ID + A +
Sbjct: 115 CALTHLGILYKDEGRLLEAAESYDKALRIDSSYKPAAE 152
>gi|356505394|ref|XP_003521476.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Glycine
max]
Length = 919
Score = 1139 bits (2947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/611 (86%), Positives = 570/611 (93%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDR+NLDKAVECYQ+ALS
Sbjct: 295 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRENLDKAVECYQLALS 354
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGK+DAAA MIEKAI ANPTYAEAYNNLGVLYRDAG I+ AI
Sbjct: 355 IKPNFSQSLNNLGVVYTVQGKVDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGDIARAI 414
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYEQCLKIDPDSRNAGQNRLLAMNYI EGHDD LFE HRDWG+RFMRLY QYTSWDN+K
Sbjct: 415 NAYEQCLKIDPDSRNAGQNRLLAMNYIEEGHDDTLFEVHRDWGRRFMRLYPQYTSWDNSK 474
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLVIGYVSPDYFTHSVSYFIE PLVYHDY N+KV+VYSAVVKAD+KTIRFREKV+
Sbjct: 475 DPERPLVIGYVSPDYFTHSVSYFIETPLVYHDYSNFKVIVYSAVVKADSKTIRFREKVLN 534
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGGIW+DIYGIDEK+VA MVRED++DILVELTGHTA+NKLGMMAC+PAP+QVTWIGYPNT
Sbjct: 535 KGGIWKDIYGIDEKRVANMVREDQVDILVELTGHTASNKLGMMACRPAPIQVTWIGYPNT 594
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDSLADPPETKQKHVEEL+RLPECFLCYTPSPEAGP+CPTPAL+NGF+TF
Sbjct: 595 TGLPTIDYRITDSLADPPETKQKHVEELVRLPECFLCYTPSPEAGPICPTPALSNGFVTF 654
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCA+PNSRLVVKCKPFC DSVR RFLSTLEQLGLE LRVD
Sbjct: 655 GSFNNLAKITPKVLQVWARILCAIPNSRLVVKCKPFCSDSVRQRFLSTLEQLGLEPLRVD 714
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 715 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 774
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+KVGL+HLIA+NEDEYV+LA QLASD++AL NLRMSLR+LMSKSP+CDG F LGLESTY
Sbjct: 775 SKVGLEHLIARNEDEYVELAQQLASDISALQNLRMSLRNLMSKSPLCDGAKFILGLESTY 834
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGSPGSVMPNGFNQASP 600
R MWHRYC+GDVPSLKR+E+LQ+ + +K SEPT+I ++E SPGSV NG+N
Sbjct: 835 RKMWHRYCRGDVPSLKRLELLQEVATGDLSNKNSEPTRIANSREDSPGSVKANGYNTIPA 894
Query: 601 SMLNLSNIEEN 611
S LN+ EEN
Sbjct: 895 SKLNIHTREEN 905
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ FYE A P AEA N+GVI+K+R +L+ A+ CY+ L++
Sbjct: 187 YNLGVVYSEMMQYDTALSFYEKAASERPIYAEAYCNMGVIFKNRGDLESAITCYERCLTV 246
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ + +KA+ N YA+A NLGV Y +
Sbjct: 247 SPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTLYKKALYYNWHYADAMYNLGVAYGEML 306
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 307 KFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRENLDKAVECYQ 350
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ + + + A Y+ A +P A L ++ D N ++ Y
Sbjct: 115 GILHKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQDGIQKYFE 174
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL + P+++ + NLGVVY+ + D A EKA + P YAEAY N+GV++++ G +
Sbjct: 175 ALKVDPHYAPAYYNLGVVYSEMMQYDTALSFYEKAASERPIYAEAYCNMGVIFKNRGDLE 234
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 235 SAITCYERCLTVSPNFEIAKNNMAIAL 261
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 3 NLGVAYGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMA 58
N V+Y +L KF A+ YE + EA G+ + ++ A E + A
Sbjct: 41 NDSVSYANVLRSRNKFVDALSIYERVLESDGANVEALIGKGICLQMQNKGRLAYESFSEA 100
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS-IS 117
+ + P + +L + G+++ +G++ AAE +KA+ +P+Y A L ++ D G+ I
Sbjct: 101 IKVDPQNACALTHCGILHKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIK 160
Query: 118 LA------IDAYEQCLKIDP 131
LA I Y + LK+DP
Sbjct: 161 LAGNTQDGIQKYFEALKVDP 180
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
+ + R+ A+ Y+ L ++L G+ +Q K A E +AI +P A
Sbjct: 49 VLRSRNKFVDALSIYERVLESDGANVEALIGKGICLQMQNKGRLAYESFSEAIKVDPQNA 108
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
A + G+L++D G + A ++Y++ L++DP + A + LA+ + G + KL +
Sbjct: 109 CALTHCGILHKDEGRLVEAAESYQKALQVDPSYKAAAE--CLAIVLTDIGTNIKLAGNTQ 166
Query: 161 DWGKRFM 167
D +++
Sbjct: 167 DGIQKYF 173
>gi|255579381|ref|XP_002530535.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223529939|gb|EEF31867.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 930
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/620 (87%), Positives = 575/620 (92%), Gaps = 4/620 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFD AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ ALS
Sbjct: 304 MYNLGVAYGEMLKFDNAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQTALS 363
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG+I +AI
Sbjct: 364 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIMANPTYAEAYNNLGVLYRDAGNIPMAI 423
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYEQCLKIDPDSRNAGQNRLLAMNYINEGHD+KLFEAHRDWG+RFMRLY QYT WDN K
Sbjct: 424 NAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDEKLFEAHRDWGRRFMRLYPQYTMWDNPK 483
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
D +RPLVIGYVSPDYFTHSVSYFIEAPLVYHDY NYKVVVYSAVVKADAKTIRFREKV+K
Sbjct: 484 DLDRPLVIGYVSPDYFTHSVSYFIEAPLVYHDYANYKVVVYSAVVKADAKTIRFREKVLK 543
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+GGIWRDIYGIDEKKVA+MVRED +DILVELTGHTANNKLGMMAC+PAP+QVTWIGYPNT
Sbjct: 544 QGGIWRDIYGIDEKKVASMVREDNVDILVELTGHTANNKLGMMACRPAPIQVTWIGYPNT 603
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDSLADP +TKQKHVEEL+RLP+CFLCYTPSPEAGPVCPTPAL NGFITF
Sbjct: 604 TGLPTIDYRITDSLADPRDTKQKHVEELVRLPDCFLCYTPSPEAGPVCPTPALANGFITF 663
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR RFL+ LE+LGLESLRVD
Sbjct: 664 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRQRFLTMLEELGLESLRVD 723
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG++HAHNVGVSLL
Sbjct: 724 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGAIHAHNVGVSLL 783
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+KVGL HL+A+NED YVQLALQLASD+ AL+NLRMSLRDLMSKSPVCDG F LGLES+Y
Sbjct: 784 SKVGLGHLVAQNEDNYVQLALQLASDIPALSNLRMSLRDLMSKSPVCDGSKFTLGLESSY 843
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEE-PSKFSEPTKIIFAKEGSPGSVMPNGFNQAS 599
R+MWHRYCKGDVPSLKRME+L+QQ SE P++ EPT+ F EG P SV NG+N S
Sbjct: 844 RDMWHRYCKGDVPSLKRMELLKQQKGSEAVPNENFEPTRNAFPVEGPPESVKLNGYNIVS 903
Query: 600 PSMLNLSNIEEN--GVQLNQ 617
S+LN S+ EEN QLN
Sbjct: 904 SSILNRSS-EENVSQTQLNH 922
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 90/193 (46%), Gaps = 43/193 (22%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ YE A P AEA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 196 YNLGVVYSEMMQYDTALNCYEKAALERPMYAEAYCNMGVIYKNRGDLESAIACYERCLAV 255
Query: 62 KPNF-----------------------------------------SQSLNNLGVVYTVQG 80
PNF + ++ NLGV Y
Sbjct: 256 SPNFEIAKNNMAIALTDLGTKVKLEGDINQGIAYYKKALYYNWHYADAMYNLGVAYGEML 315
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
K D A E A NP AEA NNLGV+Y+D ++ A++ Y+ L I P+ + N
Sbjct: 316 KFDNAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQTALSIKPNFSQSLNN- 374
Query: 141 LLAMNYINEGHDD 153
L + Y +G D
Sbjct: 375 -LGVVYTVQGKMD 386
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y E + A Y+ A +P A L ++ D N + ++ Y
Sbjct: 124 GILYKEEGRLVEAAESYQKALRADPLYKPAAECLSIVLTDLGTSLKLSGNTQEGIQKYYE 183
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL I P+++ + NLGVVY+ + D A EKA P YAEAY N+GV+Y++ G +
Sbjct: 184 ALKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAALERPMYAEAYCNMGVIYKNRGDLE 243
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 244 SAIACYERCLAVSPNFEIAKNNMAIAL 270
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 181 YYE-ALKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAALERPMYAEAYCNMGVIYKNR 239
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G +++A E+ +A +P + A NN+ + D G+
Sbjct: 240 GDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGT 275
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 16 MAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF-------SQS 68
+A + A +P A A + G++YK+ L +A E YQ AL P + S
Sbjct: 101 LAFDSFAEAIKLDPQNACALTHCGILYKEEGRLVEAAESYQKALRADPLYKPAAECLSIV 160
Query: 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
L +LG + G + +A+ +P YA AY NLGV+Y + A++ YE+
Sbjct: 161 LTDLGTSLKLSGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEK 217
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + EA G+ + ++ A + + A+ + P + +L +
Sbjct: 64 KFVDALAIYESVLEKDSGNVEAYIGKGICLQMQNMGRLAFDSFAEAIKLDPQNACALTHC 123
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G++ AAE +KA+ A+P Y A L ++ D +G+ I Y +
Sbjct: 124 GILYKEEGRLVEAAESYQKALRADPLYKPAAECLSIVLTDLGTSLKLSGNTQEGIQKYYE 183
Query: 126 CLKIDP 131
LKIDP
Sbjct: 184 ALKIDP 189
>gi|356570865|ref|XP_003553604.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Glycine
max]
Length = 917
Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/611 (86%), Positives = 568/611 (92%), Gaps = 1/611 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDR+NLDKAVECYQ+ALS
Sbjct: 294 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRENLDKAVECYQLALS 353
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGK+DAAA MIEKAI ANPTYAEAYNNLGVLYRDAG I+ AI
Sbjct: 354 IKPNFSQSLNNLGVVYTVQGKVDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGDIARAI 413
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYEQCLKIDPDSRNAGQNRLLAMNYI EGHDD LFE HRDWG+RFMRLYSQYTSWDN+K
Sbjct: 414 NAYEQCLKIDPDSRNAGQNRLLAMNYIEEGHDDTLFEVHRDWGRRFMRLYSQYTSWDNSK 473
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY N+KV+VYSAVVKAD+KTIRFREKV+
Sbjct: 474 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYSNFKVIVYSAVVKADSKTIRFREKVVN 533
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGGIW+DIYGIDEK VA MVRED++DILVELTGHTANNKLGMMAC+PAP+QVTWIGYPNT
Sbjct: 534 KGGIWKDIYGIDEKMVANMVREDQVDILVELTGHTANNKLGMMACRPAPIQVTWIGYPNT 593
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDSLADPPETKQKHVEEL+RLPECFLCYTPS EAGPVCPTPAL+NGF+TF
Sbjct: 594 TGLPTIDYRITDSLADPPETKQKHVEELVRLPECFLCYTPSLEAGPVCPTPALSNGFVTF 653
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVW RILCA+PNSRLVVKCKPFC DSVR FLSTLEQLGLE LRVD
Sbjct: 654 GSFNNLAKITPKVLQVWVRILCAIPNSRLVVKCKPFCSDSVRQIFLSTLEQLGLEPLRVD 713
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 714 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 773
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+KVGL+HLIA+NEDEYV+LA QLASD++AL NLRMSLR+LMSKSP+CDG F LGLESTY
Sbjct: 774 SKVGLEHLIARNEDEYVELAQQLASDISALQNLRMSLRNLMSKSPLCDGAKFILGLESTY 833
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGSPGSVMPNGFNQASP 600
RNMWHRYC+GDVPSLKRME+L Q + +K SEPT+I ++E SPGSV NGF
Sbjct: 834 RNMWHRYCRGDVPSLKRMELL-QVATGDLSNKNSEPTRIANSREDSPGSVKANGFKTRPV 892
Query: 601 SMLNLSNIEEN 611
S LN+ + EEN
Sbjct: 893 SKLNIHSCEEN 903
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ FYE A P AEA N+GVI+K+R +L+ A+ CY+ L++
Sbjct: 186 YNLGVVYSEMMQYDTALSFYEKAASERPVYAEAYCNMGVIFKNRGDLESAITCYERCLTV 245
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ + +KA+ N YA+A NLGV Y +
Sbjct: 246 SPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTLYKKALYYNWHYADAMYNLGVAYGEML 305
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 306 KFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRENLDKAVECYQ 349
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ + + + A Y+ A +P A L ++ D N ++ Y
Sbjct: 114 GILHKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQDGIQKYFE 173
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL + P+++ + NLGVVY+ + D A EKA + P YAEAY N+GV++++ G +
Sbjct: 174 ALKVDPHYAPAYYNLGVVYSEMMQYDTALSFYEKAASERPVYAEAYCNMGVIFKNRGDLE 233
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 234 SAITCYERCLTVSPNFEIAKNNMAIAL 260
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 3 NLGVAYGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMA 58
N V+Y +L KF A+ YE + EA G+ + ++ A E + A
Sbjct: 40 NDSVSYANVLRSRNKFVDALAIYERVLESDGANVEALIGKGICLQMQNKGRLAYESFSEA 99
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS-IS 117
+ + P + +L + G+++ +G++ AAE +KA+ +P+Y A L ++ D G+ I
Sbjct: 100 IKVDPQNACALTHCGILHKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIK 159
Query: 118 LA------IDAYEQCLKIDP 131
LA I Y + LK+DP
Sbjct: 160 LAGNTQDGIQKYFEALKVDP 179
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
+ + R+ A+ Y+ L ++L G+ +Q K A E +AI +P A
Sbjct: 48 VLRSRNKFVDALAIYERVLESDGANVEALIGKGICLQMQNKGRLAYESFSEAIKVDPQNA 107
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
A + G+L++D G + A ++Y++ L++DP + A + LA+ + G + KL +
Sbjct: 108 CALTHCGILHKDEGRLVEAAESYQKALQVDPSYKAAAE--CLAIVLTDIGTNIKLAGNTQ 165
Query: 161 DWGKRFMR 168
D +++
Sbjct: 166 DGIQKYFE 173
>gi|356534448|ref|XP_003535766.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Glycine
max]
Length = 929
Score = 1131 bits (2926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/618 (86%), Positives = 573/618 (92%), Gaps = 1/618 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ+AL
Sbjct: 302 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQLALG 361
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG ISLAI
Sbjct: 362 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGDISLAI 421
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYEQCLKIDPDSRNAGQNRLLAMNYI+EG+DDKLFEAHRDWG+RFMRLY Q+TSWDN+K
Sbjct: 422 NAYEQCLKIDPDSRNAGQNRLLAMNYIDEGNDDKLFEAHRDWGRRFMRLYPQFTSWDNSK 481
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY NYKV+VYSAVVKADAKTIRFREKV+K
Sbjct: 482 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYTNYKVIVYSAVVKADAKTIRFREKVLK 541
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGGIW+DIYG DEKKVA MVR+D++DIL+ELTGHTANNKLGM+AC+PAPVQVTWIGYPNT
Sbjct: 542 KGGIWKDIYGTDEKKVADMVRQDQVDILIELTGHTANNKLGMLACRPAPVQVTWIGYPNT 601
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDS ADPPETKQKHVEEL+RLP+ FLCYTPSPEAGPVCPTPAL+NGF+TF
Sbjct: 602 TGLPTIDYRITDSRADPPETKQKHVEELVRLPDSFLCYTPSPEAGPVCPTPALSNGFVTF 661
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWA+ILCA+PNSRLVVKCKPFCCDSVR RFLSTLE+LGLE LRVD
Sbjct: 662 GSFNNLAKITPKVLQVWAKILCAIPNSRLVVKCKPFCCDSVRQRFLSTLEKLGLEPLRVD 721
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 722 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 781
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+KVGL +LIAKNEDEYV+LAL+LASD++AL NLRMSLR+LMSKSP+CDG F LGLESTY
Sbjct: 782 SKVGLGNLIAKNEDEYVKLALKLASDISALQNLRMSLRELMSKSPLCDGAKFILGLESTY 841
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQV-VSEEPSKFSEPTKIIFAKEGSPGSVMPNGFNQAS 599
R MW RYCKGDVP+LK ME+LQQ V + SK SEPT+ + EGSP SV NGF+
Sbjct: 842 RQMWRRYCKGDVPALKCMELLQQPVSSNNPSSKNSEPTRATNSSEGSPESVKANGFSSTQ 901
Query: 600 PSMLNLSNIEENGVQLNQ 617
P LN N EENG LN
Sbjct: 902 PPKLNFLNCEENGGSLNH 919
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++DMA+ FYE A P AEA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 194 YNLGVVYSEMMQYDMALTFYEKAASERPMYAEAYCNMGVIYKNRGDLEAAITCYERCLAV 253
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 254 SPNFEIAKNNMAIALTDLGTKVKLEGDINRGVAFYKKALHYNWHYADAMYNLGVAYGEML 313
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 314 KFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRDNLDKAVECYQ 357
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQMALSIKPNFSQSLNNLG 73
Y+ A +P A L ++ D N + ++ Y AL I P+++ + NLG
Sbjct: 138 YQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFEALKIDPHYAPAYYNLG 197
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
VVY+ + D A EKA + P YAEAY N+GV+Y++ G + AI YE+CL + P+
Sbjct: 198 VVYSEMMQYDMALTFYEKAASERPMYAEAYCNMGVIYKNRGDLEAAITCYERCLAVSPNF 257
Query: 134 RNAGQNRLLAM 144
A N +A+
Sbjct: 258 EIAKNNMAIAL 268
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A +PH A A NLGV+Y + D A+ Y+ A S +P ++++ N+GV+Y +G
Sbjct: 179 YFEALKIDPHYAPAYYNLGVVYSEMMQYDMALTFYEKAASERPMYAEAYCNMGVIYKNRG 238
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
++AA E+ +A +P + A NN+ + D G+
Sbjct: 239 DLEAAITCYERCLAVSPNFEIAKNNMAIALTDLGT 273
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + EA G+ + ++ A E + A+ + P + +L +
Sbjct: 62 KFVDALALYERVLESDGGNVEALVGKGICLQMQNMGRLAFESFAEAIRMDPQNACALTHC 121
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS-ISLA------IDAYEQ 125
G++Y +G + AAE +KA+ +P+Y A L ++ D G+ I LA I Y +
Sbjct: 122 GILYKDEGCLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFE 181
Query: 126 CLKIDP 131
LKIDP
Sbjct: 182 ALKIDP 187
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ L ++L G+ +Q A E +AI +P A
Sbjct: 56 ILRSRNKFVDALALYERVLESDGGNVEALVGKGICLQMQNMGRLAFESFAEAIRMDPQNA 115
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A + G+LY+D G + A ++Y++ L++DP + A +
Sbjct: 116 CALTHCGILYKDEGCLVEAAESYQKALQVDPSYKAAAE 153
>gi|256772634|emb|CAX46402.1| putative SPINDLY protein [Rosa lucieae]
Length = 916
Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/614 (86%), Positives = 568/614 (92%), Gaps = 3/614 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS
Sbjct: 305 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 364
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG+IS+AI
Sbjct: 365 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGNISMAI 424
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
DAYEQCLKIDPDSRNAGQNRLLAMNYI+EG DDKLF AHRDWG+RFMRL SQ+TSWDN K
Sbjct: 425 DAYEQCLKIDPDSRNAGQNRLLAMNYIHEGQDDKLFVAHRDWGRRFMRLSSQHTSWDNLK 484
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLVIGYVSPDYFTHSVSYFIEAPL +H+Y YKVVVYSAVVKADAKTIRFR+KV+K
Sbjct: 485 DPERPLVIGYVSPDYFTHSVSYFIEAPLAHHEYAKYKVVVYSAVVKADAKTIRFRDKVLK 544
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGGIWRDIYGIDEKKVA++VREDKIDILVELTGHTANNKLG MAC+PAPVQVTWIGYPNT
Sbjct: 545 KGGIWRDIYGIDEKKVASIVREDKIDILVELTGHTANNKLGTMACRPAPVQVTWIGYPNT 604
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP IDYRITDSLAD P++KQKHVEEL+RLPECFLCYTPSPEAGPV PTPAL+NGFITF
Sbjct: 605 TGLPAIDYRITDSLADSPDSKQKHVEELVRLPECFLCYTPSPEAGPVSPTPALSNGFITF 664
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARIL A+PNSRLVVKCKPF CDSVR RFLSTLEQLGLE LRVD
Sbjct: 665 GSFNNLAKITPKVLQVWARILSAIPNSRLVVKCKPFSCDSVRERFLSTLEQLGLEPLRVD 724
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLN+DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS+L
Sbjct: 725 LLPLILLNYDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSIL 784
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+ VGL +LIAKNE+EYVQLA+QLASD+TAL+NLRMSLRDLMS+SPVCDG F LGLES Y
Sbjct: 785 STVGLGNLIAKNEEEYVQLAVQLASDITALSNLRMSLRDLMSRSPVCDGPKFTLGLESAY 844
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEP-SKFSEPTKIIFAKEGSPGSVMPNGFNQAS 599
RNMW RYCKGDVPS + ME+LQQ+V EEP +K +EP +I + G P S+ NGFN
Sbjct: 845 RNMWGRYCKGDVPSQRHMEILQQEVTPEEPTTKIAEPIRI--TESGFPASIKSNGFNPCP 902
Query: 600 PSMLNLSNIEENGV 613
M NLS+ EENGV
Sbjct: 903 TPMANLSSSEENGV 916
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM++FD A+ YE A P EA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 197 YNLGVVYSEMMQFDTALTCYEKAALERPMYTEAYCNMGVIYKNRGDLESAIACYERCLAV 256
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G +D +KA+ N YA+A NLGV Y +
Sbjct: 257 SPNFEIAKNNMAIALTDLGTKVKLEGDIDQGIAYYKKALYYNWHYADAMYNLGVAYGEML 316
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 317 KFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRDNLDKAVECYQ 360
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y + + A Y+ A + +P A L ++ D N ++ Y
Sbjct: 125 GILYKDEGRLREAAESYQKALNADPSYKPAAECLAIVLTDLGTSLKLAGNTQDGLQKYYE 184
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL P+++ + NLGVVY+ + D A EKA P Y EAY N+GV+Y++ G +
Sbjct: 185 ALKTDPHYAPAYYNLGVVYSEMMQFDTALTCYEKAALERPMYTEAYCNMGVIYKNRGDLE 244
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 245 SAIACYERCLAVSPNFEIAKNNMAIAL 271
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 182 YYE-ALKTDPHYAPAYYNLGVVYSEMMQFDTALTCYEKAALERPMYTEAYCNMGVIYKNR 240
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G +++A E+ +A +P + A NN+ + D G+
Sbjct: 241 GDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGT 276
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 6 VAYGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
++Y +L KF A+ YE + EA G+ + ++ A + + A+ +
Sbjct: 54 ISYANILRSRNKFSDALSLYETVLDKDARNVEAHIGKGICLQMKNMGRLAFDSFTEAIKL 113
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG-SISLA- 119
+ +L + G++Y +G++ AAE +KA+ A+P+Y A L ++ D G S+ LA
Sbjct: 114 DSENACALTHCGILYKDEGRLREAAESYQKALNADPSYKPAAECLAIVLTDLGTSLKLAG 173
Query: 120 -----IDAYEQCLKIDP 131
+ Y + LK DP
Sbjct: 174 NTQDGLQKYYEALKTDP 190
>gi|224088480|ref|XP_002308458.1| predicted protein [Populus trichocarpa]
gi|222854434|gb|EEE91981.1| predicted protein [Populus trichocarpa]
Length = 934
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/624 (84%), Positives = 570/624 (91%), Gaps = 9/624 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKF+MAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ LS
Sbjct: 303 MYNLGVAYGEMLKFEMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQATLS 362
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRD G+I++AI
Sbjct: 363 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIMANPTYAEAYNNLGVLYRDVGNITMAI 422
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AYEQCL+IDPDSRNAGQNRLLAMNYINEGHDDKLF+AHR+WG+RFMRLY Q+TSWDN K
Sbjct: 423 SAYEQCLEIDPDSRNAGQNRLLAMNYINEGHDDKLFQAHREWGRRFMRLYPQFTSWDNPK 482
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY NY VVVYSAVVK+DAKT RFREKV+K
Sbjct: 483 VPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYANYMVVVYSAVVKSDAKTNRFREKVLK 542
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEKKVA+M+REDK+DILVELTGHTANNKLGMMAC+PAPVQVTWIGYPNT
Sbjct: 543 KGGMWRDIYGIDEKKVASMIREDKVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNT 602
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDS DPP TKQKHVEEL+RLPECFLCY PSPEAGPV PTPAL+NGFITF
Sbjct: 603 TGLPTIDYRITDSFTDPPHTKQKHVEELVRLPECFLCYIPSPEAGPVTPTPALSNGFITF 662
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPF CDSVR RFL+ LEQLGLE LRVD
Sbjct: 663 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFGCDSVRQRFLTVLEQLGLEPLRVD 722
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC+TMAG+VHAHNVGVSLL
Sbjct: 723 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCITMAGAVHAHNVGVSLL 782
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+KVGL HL+AKNE+EYVQLALQLASD++AL+NLRMSLR+LMSKSPVCDG NF LGLE+TY
Sbjct: 783 SKVGLGHLVAKNEEEYVQLALQLASDISALSNLRMSLRELMSKSPVCDGPNFTLGLETTY 842
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEE-PSKFSEPTKIIFAKEGS-------PGSVMP 592
RNMWHRYCKGDVPSL+R+E+LQQQ + E+ P K S+ T I +++G P SV
Sbjct: 843 RNMWHRYCKGDVPSLRRIELLQQQGIPEDVPIKNSDSTTITSSRDGPPESRDGLPESVKA 902
Query: 593 NGFNQASPSMLNLSNIEENGVQLN 616
NGF+ SP +N S EN Q+N
Sbjct: 903 NGFSAVSPPTVNHS-CGENRSQVN 925
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ YE A P AEA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 195 YNLGVVYSEMMQYDTALSCYEKAAIERPMYAEAYCNMGVIYKNRGDLESAIACYERCLAV 254
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 255 SPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTYYKKALYYNWHYADAMYNLGVAYGEML 314
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 315 KFEMAIVFYELAFHFNPHCAEACNN--LGVIYKDRDNLDKAVECYQ 358
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y + + A Y A +P A L ++ D N + ++ Y
Sbjct: 123 GILYKDEGRLLEAAESYHKALKADPSYKPASECLAIVLTDLGTSLKLSGNTQEGIQKYYD 182
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL + P+++ + NLGVVY+ + D A EKA P YAEAY N+GV+Y++ G +
Sbjct: 183 ALKVDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAAIERPMYAEAYCNMGVIYKNRGDLE 242
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 243 SAIACYERCLAVSPNFEIAKNNMAIAL 269
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
I Y A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y
Sbjct: 176 GIQKYYDALKVDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAAIERPMYAEAYCNMGVIY 235
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+G +++A E+ +A +P + A NN+ + D G+
Sbjct: 236 KNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGT 274
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE A + EA G+ + ++ A + + A+ + P + +L +
Sbjct: 63 KFADALALYESALENDSGNVEAYIGKGICLQMQNMERLAFDSFAEAIKLDPENACALTHC 122
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G++ AAE KA+ A+P+Y A L ++ D +G+ I Y
Sbjct: 123 GILYKDEGRLLEAAESYHKALKADPSYKPASECLAIVLTDLGTSLKLSGNTQEGIQKYYD 182
Query: 126 CLKIDP 131
LK+DP
Sbjct: 183 ALKVDP 188
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ AL ++ G+ +Q A + +AI +P A
Sbjct: 57 ILRSRNKFADALALYESALENDSGNVEAYIGKGICLQMQNMERLAFDSFAEAIKLDPENA 116
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A + G+LY+D G + A ++Y + LK DP + A +
Sbjct: 117 CALTHCGILYKDEGRLLEAAESYHKALKADPSYKPASE 154
>gi|224140075|ref|XP_002323412.1| predicted protein [Populus trichocarpa]
gi|222868042|gb|EEF05173.1| predicted protein [Populus trichocarpa]
Length = 917
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/604 (86%), Positives = 560/604 (92%), Gaps = 5/604 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ---- 56
MYNLGVAYGEMLKF+MAIVFYELAF+FNPHCAEACNNLGVIYKDRDNLDKAVECYQ
Sbjct: 303 MYNLGVAYGEMLKFEMAIVFYELAFNFNPHCAEACNNLGVIYKDRDNLDKAVECYQANSD 362
Query: 57 MALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI 116
+LSIKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG+I
Sbjct: 363 TSLSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIMANPTYAEAYNNLGVLYRDAGNI 422
Query: 117 SLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
S+AI AYEQCL+IDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWG+RFMRLY QYTSW
Sbjct: 423 SMAISAYEQCLEIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGRRFMRLYPQYTSW 482
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
DN K P+RPLVIGYVSPDYFTHSVSYFIEAPLVYH Y NYKVVVYSAVVK DAKT RF+E
Sbjct: 483 DNPKVPDRPLVIGYVSPDYFTHSVSYFIEAPLVYHVYANYKVVVYSAVVKPDAKTNRFKE 542
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
KV+K+GGIWRDIYGIDEKKVA MVREDK+DILVELTGHTANNKLGMMAC+PAPVQVTWIG
Sbjct: 543 KVLKRGGIWRDIYGIDEKKVAIMVREDKVDILVELTGHTANNKLGMMACRPAPVQVTWIG 602
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG 356
YPNTTGLPTIDYRITDS ADPP+TKQKHVEELIRLPECFLCY PSPEAGPV PTPAL+NG
Sbjct: 603 YPNTTGLPTIDYRITDSFADPPDTKQKHVEELIRLPECFLCYIPSPEAGPVAPTPALSNG 662
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR RFL+ LEQLGLE
Sbjct: 663 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRQRFLTMLEQLGLEP 722
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
L VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG+VHAHNVG
Sbjct: 723 LHVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGAVHAHNVG 782
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
SLL+ VGL HL+AKNE+EYVQ ALQLASD+ AL+NLRMSLRDLMSKSPVCDG NF LGL
Sbjct: 783 ASLLSNVGLGHLVAKNEEEYVQSALQLASDIAALSNLRMSLRDLMSKSPVCDGPNFTLGL 842
Query: 537 ESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEE-PSKFSEPTKIIFAKEGSPGSVMPNGF 595
E+TYRNMWHRYCKGDVPSL+R+E+LQQQ V +E P K ++ T+I +++G P S+ NGF
Sbjct: 843 ETTYRNMWHRYCKGDVPSLRRIELLQQQEVPKEVPIKNTDSTRITSSRDGPPESIKANGF 902
Query: 596 NQAS 599
+ S
Sbjct: 903 SAVS 906
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ YE A P AEA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 195 YNLGVVYSEMMQYDTALSCYEKAAMERPMYAEAYCNMGVIYKNRGDLESAIACYERCLAV 254
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G + +KA+ N YA+A NLGV Y +
Sbjct: 255 SPNFEIAKNNMAIALTDFGTKVKLEGDISQGVAYYKKALYYNWHYADAMYNLGVAYGEML 314
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 315 KFEMAIVFYELAFNFNPHCAEACNN--LGVIYKDRDNLDKAVECYQ 358
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N + ++ Y AL + P+++ + NLGVVY+ + D A EKA
Sbjct: 162 DLGTSLKLSGNTQEGIQKYYEALKVDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAAMER 221
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + AI YE+CL + P+ A N +A+
Sbjct: 222 PMYAEAYCNMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIAL 269
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 180 YYE-ALKVDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAAMERPMYAEAYCNMGVIYKNR 238
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS-------ISLAIDAYEQCL 127
G +++A E+ +A +P + A NN+ + D G+ IS + Y++ L
Sbjct: 239 GDLESAIACYERCLAVSPNFEIAKNNMAIALTDFGTKVKLEGDISQGVAYYKKAL 293
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + EA G+ + ++ A + + A+ + P + +L +
Sbjct: 63 KFADALALYESVLEKDSGIVEAYIGKGICLQMQNMGRLAFDSFAEAIKLDPQNACALTHC 122
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G++ AAE KA+ A+ +Y A L ++ D +G+ I Y +
Sbjct: 123 GILYKDEGRLLEAAESYHKALKADLSYKPASECLAIVLTDLGTSLKLSGNTQEGIQKYYE 182
Query: 126 CLKIDP 131
LK+DP
Sbjct: 183 ALKVDP 188
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ L ++ G+ +Q A + +AI +P A
Sbjct: 57 ILRSRNKFADALALYESVLEKDSGIVEAYIGKGICLQMQNMGRLAFDSFAEAIKLDPQNA 116
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A + G+LY+D G + A ++Y + LK D + A +
Sbjct: 117 CALTHCGILYKDEGRLLEAAESYHKALKADLSYKPASE 154
>gi|449526080|ref|XP_004170042.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Cucumis
sativus]
Length = 925
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/612 (85%), Positives = 566/612 (92%), Gaps = 2/612 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFD AIVFYELAFHFNPHCAEACNNLGVIYKD+DNLDKAVECYQ+ALS
Sbjct: 303 MYNLGVAYGEMLKFDTAIVFYELAFHFNPHCAEACNNLGVIYKDQDNLDKAVECYQLALS 362
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVL+RDAG+I +A+
Sbjct: 363 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAYNNLGVLHRDAGNIEMAV 422
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
DAYE+CLKIDPDSRNAGQNRLLAMNY +EGH+DKL+EAHRDWG+RFMRLY QYTSWDN K
Sbjct: 423 DAYERCLKIDPDSRNAGQNRLLAMNYTDEGHEDKLYEAHRDWGRRFMRLYPQYTSWDNPK 482
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLVIGYVSPDYFTHSVSYF+EAPLV+HDY NYKVVVYSAVVKADAKTIRFR+KV+K
Sbjct: 483 DPERPLVIGYVSPDYFTHSVSYFVEAPLVHHDYANYKVVVYSAVVKADAKTIRFRDKVLK 542
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+GG+WRDIYGIDEKKVA+MVREDK+DILVELTGHTANNKLGMMAC+PAPVQVTWIGYPNT
Sbjct: 543 QGGVWRDIYGIDEKKVASMVREDKVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNT 602
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITD+L DPP TKQKHVEEL+RLPECFLCYTPSPEAG V PAL+NGFITF
Sbjct: 603 TGLPTIDYRITDALTDPPNTKQKHVEELVRLPECFLCYTPSPEAGSVSSAPALSNGFITF 662
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVL+VWARILCA+PNSRLVVKCKPFCCDSVR RFLSTLEQLGLES RVD
Sbjct: 663 GSFNNLAKITPKVLEVWARILCAIPNSRLVVKCKPFCCDSVRQRFLSTLEQLGLESQRVD 722
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 723 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 782
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+KVGL HL+AKNE+EYV+LALQLASDVTAL+NLRMSLR+LMSKSPVCDG NF LGLESTY
Sbjct: 783 SKVGLGHLVAKNEEEYVKLALQLASDVTALSNLRMSLRNLMSKSPVCDGPNFILGLESTY 842
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGSPGSVMPNGFNQASP 600
R MWHRYCKGDVPSL+RME++QQ+ ++EE ++ I A + SP S NG S
Sbjct: 843 RKMWHRYCKGDVPSLRRMEIVQQRELTEETITTTDSN--ITALKESPASTQSNGHCPVSL 900
Query: 601 SMLNLSNIEENG 612
+L+ S ENG
Sbjct: 901 DVLDRSPCGENG 912
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y E + A Y+ A +P A L V+ D N ++ Y
Sbjct: 123 GILYKEEGRLVEAAESYQKALRVDPSYRPAAECLAVVLTDLGTSLKLSGNSQDGIQKYYE 182
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL I P+++ + NLGVVY+ + D A EKA P YAEAY N+GV+Y++ G +
Sbjct: 183 ALKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAAFERPMYAEAYCNMGVIYKNRGDLE 242
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 243 SAIACYERCLAVSPNFEIAKNNMAIAL 269
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 180 YYE-ALKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAAFERPMYAEAYCNMGVIYKNR 238
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G +++A E+ +A +P + A NN+ + D G+
Sbjct: 239 GDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGT 274
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ L + ++ G+ +Q + A E +AI +P A
Sbjct: 57 ILRSRNKFSDALVLYEKVLEKDGDNLEAHIGKGICLQMQNMIKPAFESFAEAIRLDPQNA 116
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A+ + G+LY++ G + A ++Y++ L++DP R A +
Sbjct: 117 CAFTHCGILYKEEGRLVEAAESYQKALRVDPSYRPAAE 154
>gi|75318818|sp|O82039.1|SPY_PETHY RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY; AltName:
Full=PhSPY
gi|3319682|emb|CAA76834.1| SPINDLY protein [Petunia x hybrida]
Length = 932
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/625 (83%), Positives = 562/625 (89%), Gaps = 11/625 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL+
Sbjct: 303 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALT 362
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG+ISLAI
Sbjct: 363 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGNISLAI 422
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYEQCLKIDPDSRNAGQNRLLAMNYINEG DDKL+EAHRDWG RFMRLY QY SWDN+K
Sbjct: 423 EAYEQCLKIDPDSRNAGQNRLLAMNYINEGSDDKLYEAHRDWGWRFMRLYQQYNSWDNSK 482
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPER LVIGYVSPDYFTHSVSYFIEAPL YHDY NYKVV+YSAVVKADAKT RFR+KV+K
Sbjct: 483 DPERQLVIGYVSPDYFTHSVSYFIEAPLAYHDYANYKVVIYSAVVKADAKTNRFRDKVLK 542
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEKKV++M+REDK+DI++ELTGHTANNKLGMMAC+PAPVQVTWIGYPNT
Sbjct: 543 KGGVWRDIYGIDEKKVSSMIREDKVDIMIELTGHTANNKLGMMACRPAPVQVTWIGYPNT 602
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDS+ADPP TKQKHVEEL+RLP+ FLCYTPSPEAGPV P PALTNGF+TF
Sbjct: 603 TGLPTIDYRITDSMADPPSTKQKHVEELVRLPDSFLCYTPSPEAGPVSPAPALTNGFVTF 662
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAVP+SRL+VKCKPF CDSVR RFLS LEQLGLE RVD
Sbjct: 663 GSFNNLAKITPKVLQVWARILCAVPHSRLIVKCKPFGCDSVRQRFLSILEQLGLEPQRVD 722
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L+PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM GSVHAHNVGVSLL
Sbjct: 723 LVPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMGGSVHAHNVGVSLL 782
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VGL+ L+A+NEDEYV+LA+QLASDVT+L+NLRMSLR+LM+KSP+CDG F LESTY
Sbjct: 783 KTVGLRKLVARNEDEYVELAIQLASDVTSLSNLRMSLRELMAKSPLCDGAQFTQNLESTY 842
Query: 541 RNMWHRYCKGDVPSLKRME-------MLQQQVVSEE-PSKFSEPTKIIFAKEGSPGSVMP 592
R+MW RYC GDVPSL+RME L + VV EE P E T+I +K+ G +
Sbjct: 843 RSMWRRYCDGDVPSLRRMELLQQQQQTLAELVVPEESPVSPIEKTRISASKD---GPIKE 899
Query: 593 NGFNQASPSMLNLSNIEENGVQLNQ 617
NGF + + N S IEENGVQLNQ
Sbjct: 900 NGFTVSPALVYNSSTIEENGVQLNQ 924
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++DMA+ YE A P AEA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 195 YNLGVVYSEMMQYDMALNCYEKAAIERPMYAEAYCNMGVIYKNRGDLESAIACYERCLAV 254
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 255 SPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYYKKALYYNWHYADAMYNLGVAYGEML 314
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 315 KFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRDNLDKAVECYQ 358
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y + + A Y+ A +P A L ++ D N + ++ Y
Sbjct: 123 GILYKDEGRLVEAAESYQKALKADPSYKPAAECLAIVLTDIGTSLKLAGNSQEGIQKYYE 182
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
A+ I +++ + NLGVVY+ + D A EKA P YAEAY N+GV+Y++ G +
Sbjct: 183 AIKIDSHYAPAYYNLGVVYSEMMQYDMALNCYEKAAIERPMYAEAYCNMGVIYKNRGDLE 242
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 243 SAIACYERCLAVSPNFEIAKNNMAIAL 269
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A + H A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 180 YYE-AIKIDSHYAPAYYNLGVVYSEMMQYDMALNCYEKAAIERPMYAEAYCNMGVIYKNR 238
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G +++A E+ +A +P + A NN+ + D G+
Sbjct: 239 GDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGT 274
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + E+ G+ + ++ A E + A+ + P + +L +
Sbjct: 63 KFVDALAIYESVLQKDSGSIESLIGKGICLQMQNMGRLAFESFAEAIKLDPQNACALTHC 122
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG-SISLA------IDAYEQ 125
G++Y +G++ AAE +KA+ A+P+Y A L ++ D G S+ LA I Y +
Sbjct: 123 GILYKDEGRLVEAAESYQKALKADPSYKPAAECLAIVLTDIGTSLKLAGNSQEGIQKYYE 182
Query: 126 CLKID 130
+KID
Sbjct: 183 AIKID 187
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ L +SL G+ +Q A E +AI +P A
Sbjct: 57 ILRSRNKFVDALAIYESVLQKDSGSIESLIGKGICLQMQNMGRLAFESFAEAIKLDPQNA 116
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A + G+LY+D G + A ++Y++ LK DP + A +
Sbjct: 117 CALTHCGILYKDEGRLVEAAESYQKALKADPSYKPAAE 154
>gi|195423963|gb|ACF96937.1| SPINDLY [Sinningia speciosa]
Length = 934
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/625 (83%), Positives = 563/625 (90%), Gaps = 8/625 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS
Sbjct: 302 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 361
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG+ISLAI
Sbjct: 362 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIVANPTYAEAYNNLGVLYRDAGNISLAI 421
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYEQCLKIDPDSRNAGQNRLLAMNYINE +DDKL+EAHRDWG+RFMRL+ QYTSWDN K
Sbjct: 422 EAYEQCLKIDPDSRNAGQNRLLAMNYINETNDDKLYEAHRDWGRRFMRLFPQYTSWDNIK 481
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLVIGYVSPDYFTHSVSYFIEAPL+YHD+ NYKVVVYSAVVKADAKT RFR+KV+K
Sbjct: 482 DPERPLVIGYVSPDYFTHSVSYFIEAPLIYHDHVNYKVVVYSAVVKADAKTNRFRDKVLK 541
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
GG WRD+YGIDEKKVA+MVREDKIDILVELTGHTANNKLGMMAC+PAPVQVTWIGYPNT
Sbjct: 542 HGGTWRDVYGIDEKKVASMVREDKIDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNT 601
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP IDYRITD+LAD P+TKQKHVEEL+RLP CFLCYTPSPEAGPV PTPA +NGFITF
Sbjct: 602 TGLPAIDYRITDALADSPDTKQKHVEELVRLPGCFLCYTPSPEAGPVSPTPAQSNGFITF 661
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITP+VLQVWARILCAVPNSRL+VKCKPFC DSVR +FLSTLE+LGLESLRVD
Sbjct: 662 GSFNNLAKITPRVLQVWARILCAVPNSRLIVKCKPFCSDSVRLQFLSTLEKLGLESLRVD 721
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLN DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC++M G VHAHNVGVSLL
Sbjct: 722 LLPLILLNRDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCISMGGHVHAHNVGVSLL 781
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VGL +L+AKNEDEYVQLALQLASD+TAL++LRM LRDLM KSP+CDG F GLE+ Y
Sbjct: 782 NTVGLSNLVAKNEDEYVQLALQLASDITALSSLRMRLRDLMLKSPLCDGSKFTKGLETAY 841
Query: 541 RNMWHRYCKGDVPSLKRMEML-------QQQVVSEEPS-KFSEPTKIIFAKEGSPGSVMP 592
R+MWHRYCKGDVPSL+ +EM+ QQ SEE + +F EPTKI + + S +
Sbjct: 842 RDMWHRYCKGDVPSLRCIEMMQQQQQLHSQQAFSEEIAVRFMEPTKIKISGDDSLAPIKI 901
Query: 593 NGFNQASPSMLNLSNIEENGVQLNQ 617
NGFN PS + S EENG+ NQ
Sbjct: 902 NGFNLGPPSSFSTSEGEENGLLPNQ 926
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ YE A P AEA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 194 YNLGVVYSEMMQYDTALNCYEKAAIERPMYAEAYCNMGVIYKNRGDLESAIACYERCLAV 253
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 254 SPNFEIAKNNMAIALTDLGTKVKLEGDINHGVAYYKKALYYNWHYADAMYNLGVAYGEML 313
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 314 KFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRDNLDKAVECYQ 357
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNP--HCAEAC-----NNLGVIYKDRDNLDKAVECYQM 57
G+ Y + + A Y+ A +P A C +LG K N + ++ Y
Sbjct: 122 GILYKDEGRLAEAAEMYQKALKADPSYKLAAECLAIVLTDLGTSLKLAGNTQEGIQKYYE 181
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
A+ I P+++ + NLGVVY+ + D A EKA P YAEAY N+GV+Y++ G +
Sbjct: 182 AIKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAAIERPMYAEAYCNMGVIYKNRGDLE 241
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 242 SAIACYERCLAVSPNFEIAKNNMAIAL 268
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 179 YYE-AIKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAAIERPMYAEAYCNMGVIYKNR 237
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G +++A E+ +A +P + A NN+ + D G+
Sbjct: 238 GDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGT 273
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + EA G+ + ++ A E + A+ + P + +L +
Sbjct: 62 KFVDALAVYETVLEKDGESVEAHIGKGICLQMQNLGRLACESFAEAVRLDPQNACALTHC 121
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G++ AAEM +KA+ A+P+Y A L ++ D AG+ I Y +
Sbjct: 122 GILYKDEGRLAEAAEMYQKALKADPSYKLAAECLAIVLTDLGTSLKLAGNTQEGIQKYYE 181
Query: 126 CLKIDP 131
+KIDP
Sbjct: 182 AIKIDP 187
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ L ++ G+ +Q A E +A+ +P A
Sbjct: 56 ILRSRNKFVDALAVYETVLEKDGESVEAHIGKGICLQMQNLGRLACESFAEAVRLDPQNA 115
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A + G+LY+D G ++ A + Y++ LK DP + A +
Sbjct: 116 CALTHCGILYKDEGRLAEAAEMYQKALKADPSYKLAAE 153
>gi|15229778|ref|NP_187761.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Arabidopsis
thaliana]
gi|75332921|sp|Q96301.1|SPY_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY
gi|12322895|gb|AAG51433.1|AC008153_6 spindly (gibberellin signal transduction protein); 75377-80082
[Arabidopsis thaliana]
gi|1589778|gb|AAC49446.1| SPINDLY [Arabidopsis thaliana]
gi|62319977|dbj|BAD94086.1| spindly [Arabidopsis thaliana]
gi|332641539|gb|AEE75060.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Arabidopsis
thaliana]
Length = 914
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/596 (85%), Positives = 557/596 (93%), Gaps = 4/596 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGV+YKDRDNLDKAVECYQMALS
Sbjct: 298 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDNLDKAVECYQMALS 357
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNF+QSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEA+NNLGVLYRDAG+I++AI
Sbjct: 358 IKPNFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAI 417
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
DAYE+CLKIDPDSRNAGQNRLLAMNYINEG DDKLFEAHRDWG RF RL+ QYTSWDN K
Sbjct: 418 DAYEECLKIDPDSRNAGQNRLLAMNYINEGLDDKLFEAHRDWGWRFTRLHPQYTSWDNLK 477
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERP+ IGY+SPD+FTHSVSYFIEAPL +HDY YKVVVYSAVVKADAKT RFR+KV+K
Sbjct: 478 DPERPITIGYISPDFFTHSVSYFIEAPLTHHDYTKYKVVVYSAVVKADAKTYRFRDKVLK 537
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+W+DIYGIDEKK+A+MVREDKIDILVELTGHTANNKLG MAC+PAPVQVTWIGYPNT
Sbjct: 538 KGGVWKDIYGIDEKKIASMVREDKIDILVELTGHTANNKLGTMACRPAPVQVTWIGYPNT 597
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPT+DYRITDSLADPP+TKQK VEEL+RLP+CFLCYTPSPEAGPVCPTPAL+NGF+TF
Sbjct: 598 TGLPTVDYRITDSLADPPDTKQKQVEELVRLPDCFLCYTPSPEAGPVCPTPALSNGFVTF 657
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS+R RFL+TLEQLGLES RVD
Sbjct: 658 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSIRQRFLTTLEQLGLESKRVD 717
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLIL NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 718 LLPLILFNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 777
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
TKVGL HL+AKNEDEYVQL++ LASDVTAL+ LRMSLRDLM+ SPVC+G +FA+GLES Y
Sbjct: 778 TKVGLGHLVAKNEDEYVQLSVDLASDVTALSKLRMSLRDLMAGSPVCNGPSFAVGLESAY 837
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEP--SKFSEPTKIIFAKEGSPGSVMPNG 594
RNMW +YCKG+VPSL+RMEMLQ++ V ++P SK P+++ E +P S+ NG
Sbjct: 838 RNMWKKYCKGEVPSLRRMEMLQKE-VHDDPLISKDLGPSRVSVTGEATP-SLKANG 891
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 90/193 (46%), Gaps = 43/193 (22%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ YE A P AEA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 190 YNLGVVYSEMMQYDNALSCYEKAALERPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAV 249
Query: 62 KPNF-----------------------------------------SQSLNNLGVVYTVQG 80
PNF + ++ NLGV Y
Sbjct: 250 SPNFEIAKNNMAIALTDLGTKVKLEGDVTQGVAYYKKALYYNWHYADAMYNLGVAYGEML 309
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
K D A E A NP AEA NNLGVLY+D ++ A++ Y+ L I P+ + N
Sbjct: 310 KFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDNLDKAVECYQMALSIKPNFAQSLNN- 368
Query: 141 LLAMNYINEGHDD 153
L + Y +G D
Sbjct: 369 -LGVVYTVQGKMD 380
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N + ++ Y AL I P+++ + NLGVVY+ + D A EKA
Sbjct: 157 DLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAALER 216
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + +AI YE+CL + P+ A N +A+
Sbjct: 217 PMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIAL 264
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 175 YYE-ALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAALERPMYAEAYCNMGVIYKNR 233
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G ++ A E+ +A +P + A NN+ + D G+
Sbjct: 234 GDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGT 269
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + EA G+ + ++ + A +C+ A+ + P+ + +L +
Sbjct: 58 KFADALALYEAMLEKDSKNVEAHIGKGICLQTQNKGNLAFDCFSEAIRLDPHNACALTHC 117
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G+++ +G++ AAE +KA+ A+ +Y A L ++ D AG+ I Y +
Sbjct: 118 GILHKEEGRLVEAAESYQKALMADASYKPAAECLAIVLTDLGTSLKLAGNTQEGIQKYYE 177
Query: 126 CLKIDP 131
LKIDP
Sbjct: 178 ALKIDP 183
>gi|297829706|ref|XP_002882735.1| hypothetical protein ARALYDRAFT_478494 [Arabidopsis lyrata subsp.
lyrata]
gi|297328575|gb|EFH58994.1| hypothetical protein ARALYDRAFT_478494 [Arabidopsis lyrata subsp.
lyrata]
Length = 897
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/604 (84%), Positives = 559/604 (92%), Gaps = 4/604 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGV+YKDRDNLDKAVECYQMALS
Sbjct: 281 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDNLDKAVECYQMALS 340
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNF+QSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEA+NNLGVLYRDAG+I++AI
Sbjct: 341 IKPNFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAI 400
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
DAYE+CLKIDPDSRNAGQNRLLAMNYINEG DDKL+EAHRDWG RF RL+ QYTSWDN K
Sbjct: 401 DAYEECLKIDPDSRNAGQNRLLAMNYINEGLDDKLYEAHRDWGWRFTRLHPQYTSWDNLK 460
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERP+ IGY+SPD+FTHSVSYFIEAPL +HDY YKVVVYSAVVKADAKT RFR+KV+K
Sbjct: 461 DPERPITIGYISPDFFTHSVSYFIEAPLTHHDYTKYKVVVYSAVVKADAKTYRFRDKVLK 520
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+W+DIYGIDEKK+A+MVREDKIDILVELTGHTANNKLG MAC+PAP+QVTWIGYPNT
Sbjct: 521 KGGVWKDIYGIDEKKIASMVREDKIDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNT 580
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPT+DYRITDSLADPP+TKQK VEEL+RLPECFLCYTPSPEAGPVCPTP L+NGF+TF
Sbjct: 581 TGLPTVDYRITDSLADPPDTKQKQVEELVRLPECFLCYTPSPEAGPVCPTPTLSNGFVTF 640
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS+R RFL+TLEQLGLES RVD
Sbjct: 641 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSIRQRFLTTLEQLGLESKRVD 700
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLIL NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 701 LLPLILFNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 760
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
TKVGL HL+AKNEDEYVQL++ LASDVTAL+ LRMSLRDLM+ SPVC+G +FA+ LES Y
Sbjct: 761 TKVGLGHLVAKNEDEYVQLSVDLASDVTALSKLRMSLRDLMAGSPVCNGPSFAVALESAY 820
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEP--SKFSEPTKIIFAKEGSPGSVMPNGFNQA 598
RNMW +YCKG+VPSL+RMEMLQ++ V ++P SK S P+++ E +P S+ NG
Sbjct: 821 RNMWKKYCKGEVPSLRRMEMLQKE-VQDDPLISKDSGPSRLSVTGEATP-SLKANGSAPV 878
Query: 599 SPSM 602
+ S+
Sbjct: 879 TSSL 882
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N + ++ Y AL I P+++ + NLGVVY+ + D A EKA
Sbjct: 140 DLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAALER 199
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + +AI YE+CL + P+ A N +A+
Sbjct: 200 PMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIAL 247
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 158 YYE-ALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAALERPMYAEAYCNMGVIYKNR 216
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G ++ A E+ +A +P + A NN+ + D G+
Sbjct: 217 GDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGT 252
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + EA G+ + ++ + A +C+ A+ + P+ + +L +
Sbjct: 41 KFADALALYEAMLEKDSKNVEAHIGKGICLQTQNKGNLAFDCFSEAIRLDPHNACALTHC 100
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G+++ +G++ AAE +KA+ A+ +Y A L ++ D AG+ I Y +
Sbjct: 101 GILHKEEGRLVEAAESYQKALMADASYKPAAECLAIVLTDLGTSLKLAGNTQEGIQKYYE 160
Query: 126 CLKIDP 131
LKIDP
Sbjct: 161 ALKIDP 166
>gi|312282561|dbj|BAJ34146.1| unnamed protein product [Thellungiella halophila]
Length = 762
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/596 (84%), Positives = 554/596 (92%), Gaps = 4/596 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGV+YKDRDNLDKAVECYQMALS
Sbjct: 160 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDNLDKAVECYQMALS 219
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNF+QSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEA+NNLGVLYRDAG+I++AI
Sbjct: 220 IKPNFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAI 279
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
DAYE+CLKIDPDSRNAGQNRLLAMNYINEG DDKLFEAHRDWG RF RL+ QYTSWDN K
Sbjct: 280 DAYEECLKIDPDSRNAGQNRLLAMNYINEGLDDKLFEAHRDWGWRFTRLHPQYTSWDNLK 339
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERP+ IGY+SPD+FTHSVSYFIEAPL +HDY YKVVVYSAVVKADAKT RFR+KV+K
Sbjct: 340 DPERPITIGYISPDFFTHSVSYFIEAPLTHHDYTKYKVVVYSAVVKADAKTYRFRDKVLK 399
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+W+D+YGIDEKK+A+MVREDKIDILVELTGHTANNKLG MAC+PAP+QVTWIGYPNT
Sbjct: 400 KGGVWKDVYGIDEKKIASMVREDKIDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNT 459
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPT+DYRITDSLADPP+TKQK VEEL+RLP+CFLCYTPSPEAGPVCPTPAL+NGF+TF
Sbjct: 460 TGLPTVDYRITDSLADPPDTKQKQVEELVRLPDCFLCYTPSPEAGPVCPTPALSNGFVTF 519
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS+R RFL+TLEQLGLES RVD
Sbjct: 520 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSIRQRFLTTLEQLGLESKRVD 579
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLIL NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 580 LLPLILFNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 639
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+KVGL HL+AKNEDEYVQL++ LASDVTAL+ LRMSLRDLM+ SPVC+G +FA+ LES Y
Sbjct: 640 SKVGLGHLVAKNEDEYVQLSVDLASDVTALSKLRMSLRDLMAGSPVCNGPSFAVALESAY 699
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEP--SKFSEPTKIIFAKEGSPGSVMPNG 594
RNMW YCKG+VPS +RMEMLQ++ V E+P SK P+++ E +P S+ NG
Sbjct: 700 RNMWKNYCKGEVPSSRRMEMLQKE-VQEDPLISKDLGPSRLNVTGEATP-SLKANG 753
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ YE A P AEA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 52 YNLGVVYSEMMQYDSALSCYEKAALERPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAV 111
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G + +KA+ N YA+A NLGV Y +
Sbjct: 112 SPNFEIAKNNMAIALTDLGTKVKLEGDVSQGVAYYKKALYYNWHYADAMYNLGVAYGEML 171
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 172 KFDMAIVFYELAFHFNPHCAEACNN--LGVLYKDRDNLDKAVECYQ 215
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 63/108 (58%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N + ++ Y AL I P+++ + NLGVVY+ + D+A EKA
Sbjct: 19 DLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDSALSCYEKAALER 78
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + +AI YE+CL + P+ A N +A+
Sbjct: 79 PMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIAL 126
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 37 YYE-ALKIDPHYAPAYYNLGVVYSEMMQYDSALSCYEKAALERPMYAEAYCNMGVIYKNR 95
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G ++ A E+ +A +P + A NN+ + D G+
Sbjct: 96 GDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGT 131
>gi|449451161|ref|XP_004143330.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Cucumis
sativus]
Length = 920
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/612 (84%), Positives = 557/612 (91%), Gaps = 7/612 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFD AIVFYELAFHFNPHCAEACNNLGVIYKD+DNLDKAVECYQ+ALS
Sbjct: 303 MYNLGVAYGEMLKFDTAIVFYELAFHFNPHCAEACNNLGVIYKDQDNLDKAVECYQLALS 362
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLG L I + I
Sbjct: 363 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAYNNLGPL-----YIYIYI 417
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AYE+CLKIDPDSRNAGQNRLLAMNY +EGH+DKL+EAHRDWG+RFMRLY QYTSWDN K
Sbjct: 418 YAYERCLKIDPDSRNAGQNRLLAMNYTDEGHEDKLYEAHRDWGRRFMRLYPQYTSWDNPK 477
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLVIGYVSPDYFTHSVSYF+EAPLV+HDY NYKVVVYSAVVKADAKTIRFR+KV+K
Sbjct: 478 DPERPLVIGYVSPDYFTHSVSYFVEAPLVHHDYANYKVVVYSAVVKADAKTIRFRDKVLK 537
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+GG+WRDIYGIDEKKVA+MVREDK+DILVELTGHTANNKLGMMAC+PAPVQVTWIGYPNT
Sbjct: 538 QGGVWRDIYGIDEKKVASMVREDKVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNT 597
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITD+L DPP TKQKHVEEL+RLPECFLCYTPSPEAG V PAL+NGFITF
Sbjct: 598 TGLPTIDYRITDALTDPPNTKQKHVEELVRLPECFLCYTPSPEAGSVSSAPALSNGFITF 657
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVL+VWARILCA+PNSRLVVKCKPFCCDSVR RFLSTLEQLGLES RVD
Sbjct: 658 GSFNNLAKITPKVLEVWARILCAIPNSRLVVKCKPFCCDSVRQRFLSTLEQLGLESQRVD 717
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 718 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 777
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+KVGL HL+AKNE+EYV+LALQLASDVTAL+NLRMSLR+LMSKSPVCDG NF LGLESTY
Sbjct: 778 SKVGLGHLVAKNEEEYVKLALQLASDVTALSNLRMSLRNLMSKSPVCDGPNFILGLESTY 837
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGSPGSVMPNGFNQASP 600
R MWHRYCKGDVPSL+RME++QQ+ ++EE ++ I A + SP S NG S
Sbjct: 838 RKMWHRYCKGDVPSLRRMEIVQQRELTEETITTTDSN--ITALKESPASTQSNGHCPVSL 895
Query: 601 SMLNLSNIEENG 612
+L+ S ENG
Sbjct: 896 DVLDRSPCGENG 907
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y E + A Y+ A +P A L V+ D N ++ Y
Sbjct: 123 GILYKEEGRLVEAAESYQKALRVDPSYRPAAECLAVVLTDLGTSLKLSGNSQDGIQKYYE 182
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL I P+++ + NLGVVY+ + D A EKA P YAEAY N+GV+Y++ G +
Sbjct: 183 ALKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAAFERPMYAEAYCNMGVIYKNRGDLE 242
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 243 SAIACYERCLAVSPNFEIAKNNMAIAL 269
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 180 YYE-ALKIDPHYAPAYYNLGVVYSEMMQYDTALNCYEKAAFERPMYAEAYCNMGVIYKNR 238
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G +++A E+ +A +P + A NN+ + D G+
Sbjct: 239 GDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGT 274
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ L + ++ G+ +Q + A E +AI +P A
Sbjct: 57 ILRSRNKFSDALVLYEKVLEKDGDNLEAHIGKGICLQMQNMIKPAFESFAEAIRLDPQNA 116
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A+ + G+LY++ G + A ++Y++ L++DP R A +
Sbjct: 117 CAFTHCGILYKEEGRLVEAAESYQKALRVDPSYRPAAE 154
>gi|75330266|sp|Q8LP10.1|SPY_EUSGR RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY; Short=EgSPY
gi|22773823|dbj|BAC11808.1| SPINDLY [Eustoma grandiflorum]
Length = 918
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/633 (80%), Positives = 557/633 (87%), Gaps = 24/633 (3%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAI+F ELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ ALS
Sbjct: 275 MYNLGVAYGEMLKFDMAIIFDELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQKALS 334
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVV+TVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG+I LAI
Sbjct: 335 IKPNFSQSLNNLGVVFTVQGKMDAAASMIEKAIVANPTYAEAYNNLGVLYRDAGNIFLAI 394
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYEQCLKIDPDSRNAGQNRLLAMNYINEG DD+L+EAHRDWG RFMRLYSQYTSWDN K
Sbjct: 395 EAYEQCLKIDPDSRNAGQNRLLAMNYINEGADDRLYEAHRDWGGRFMRLYSQYTSWDNPK 454
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLVIGY SPD+F +SYFIEAPL+YHDY+N+KVV YSAVVKADAKT RFRE+V+K
Sbjct: 455 DPERPLVIGYGSPDHF---LSYFIEAPLLYHDYENFKVVTYSAVVKADAKTNRFRERVLK 511
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGGIWRDIYGIDEKKVA+M+REDK+DIL+ELTGHTANNKLGMMAC+PAP+QVTWIGYPNT
Sbjct: 512 KGGIWRDIYGIDEKKVASMIREDKVDILIELTGHTANNKLGMMACRPAPIQVTWIGYPNT 571
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDSLADP +TKQKHVEELI+LP CFLCYTPSPEAGPV PTPAL+NGFITF
Sbjct: 572 TGLPTIDYRITDSLADPLDTKQKHVEELIQLPACFLCYTPSPEAGPVSPTPALSNGFITF 631
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAV NSRL+VKCKPFCC+SVR FLSTLEQLGLES RVD
Sbjct: 632 GSFNNLAKITPKVLQVWARILCAVSNSRLIVKCKPFCCESVRQTFLSTLEQLGLESTRVD 691
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC+TM G VHAHNVGVSLL
Sbjct: 692 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCITMRGLVHAHNVGVSLL 751
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+ VGL HL+AKNED+YV+LA+QLASDVTAL+NLR++LR+LMSKSP+CDG F LE TY
Sbjct: 752 STVGLGHLVAKNEDDYVRLAVQLASDVTALSNLRLTLRELMSKSPLCDGPKFIQDLELTY 811
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQ---VVSEE--------PSKF--SEPTKIIFAKEGSP 587
R+MWHRYCKGD+PSL RME+LQ++ VV E+ P K EP E P
Sbjct: 812 RSMWHRYCKGDIPSLSRMEILQKEELDVVQEQLHQQPNTSPQKLVKDEPADDASGPEHGP 871
Query: 588 GS-------VMPNGFNQASPSMLNLSNIEENGV 613
S + NG+N + S + + EENGV
Sbjct: 872 ASKDNPLVLIKINGYNTSP-SSITSPSSEENGV 903
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKD-----RDNLDKAVECYQMALSIKPNFSQSLNNLGVV 75
Y+ A +P A L + D + N + ++ Y A+ I P+++ + NLGVV
Sbjct: 122 YQKALQADPSYKPAAECLATVLNDLGTSLKGNTQEGIQKYYEAVKIDPHYAPACYNLGVV 181
Query: 76 YTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN 135
Y+ + D A E+A +PTYA+AY N G++Y++ G + CL + P+
Sbjct: 182 YSEMMQYDVALSCYERAATESPTYADAYCNTGIIYKNRGDL---------CLAVSPNFEI 232
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
A N +A+ + G +KL E D G + + + Y +W
Sbjct: 233 AKNNMGIALTDL--GTKEKL-EGDIDQGVAYYK-KALYYNW 269
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 5 GVAYGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ Y ++L KF A+ YEL + EA G+ + ++ + A +C+ A+
Sbjct: 37 AITYAKILRSRNKFVDALAIYEL--EKDSKNVEAHIGKGICLQTQNKGNLAFDCFSEAIR 94
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS----- 115
+ P+ + +L + G++Y +G++ AA +KA+ A+P+Y A L + D G+
Sbjct: 95 LDPHNACALTHCGILYKDEGRLVEAASY-QKALQADPSYKPAAECLATVLNDLGTSLKGN 153
Query: 116 ISLAIDAYEQCLKIDP 131
I Y + +KIDP
Sbjct: 154 TQEGIQKYYEAVKIDP 169
>gi|350535410|ref|NP_001233937.1| probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Solanum
lycopersicum]
gi|75330646|sp|Q8RVB2.1|SPY_SOLLC RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY; Short=LeSPY
gi|19913115|emb|CAC85168.1| SPY protein [Solanum lycopersicum]
gi|19913117|emb|CAC85169.1| SPY protein [Solanum lycopersicum]
Length = 931
Score = 1055 bits (2727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/624 (81%), Positives = 554/624 (88%), Gaps = 8/624 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ+ALS
Sbjct: 303 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQLALS 362
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG+ISLAI
Sbjct: 363 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGNISLAI 422
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYEQCLKIDPDSRNAGQNRLLAMNYINEG DDKL+EAHRDWG+RFM+LY QYTSWDN+K
Sbjct: 423 EAYEQCLKIDPDSRNAGQNRLLAMNYINEGTDDKLYEAHRDWGRRFMKLYPQYTSWDNSK 482
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
PERPLVIGYVSPDYFTHSVSYFIEAPL +HDY NYKVVVYS+VVKADAKT RFR+KVMK
Sbjct: 483 VPERPLVIGYVSPDYFTHSVSYFIEAPLAHHDYTNYKVVVYSSVVKADAKTNRFRDKVMK 542
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEKKV++M+REDK+DI+VELTGHTANNKLG MAC+PAPVQVTWIGYPNT
Sbjct: 543 KGGLWRDIYGIDEKKVSSMIREDKVDIMVELTGHTANNKLGTMACRPAPVQVTWIGYPNT 602
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITD++ADPP KQKHVEEL+RLP FLCYTPSPEAGPVCP PAL+NGF+TF
Sbjct: 603 TGLPTIDYRITDAMADPPNAKQKHVEELVRLPNSFLCYTPSPEAGPVCPAPALSNGFVTF 662
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVL+VWARIL AVP+SRL+VKCKPFCCDSVR RFLS LEQLGLE RVD
Sbjct: 663 GSFNNLAKITPKVLKVWARILSAVPHSRLIVKCKPFCCDSVRQRFLSILEQLGLEPQRVD 722
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM GSVHAHNVGVSLL
Sbjct: 723 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMGGSVHAHNVGVSLL 782
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VGL++L+A+NEDEYV+ A+QLASDVT+L+NLRMSLR+LMSKSP+CDG F +ES Y
Sbjct: 783 KTVGLENLVARNEDEYVESAIQLASDVTSLSNLRMSLRELMSKSPLCDGAKFTRNIESIY 842
Query: 541 RNMWHRYCKGDVPSLKRM------EMLQQQVVSEEPSKFSEPTKIIFAKEGSPGSVMPNG 594
R+MW RYC GDVPSL+RM + + VV EE S P++ + GS+ NG
Sbjct: 843 RSMWRRYCDGDVPSLRRMELLQQQQTQTESVVPEESS--VNPSERTITSAPTDGSIKENG 900
Query: 595 FNQASPSMLNLSNIEENGVQLNQH 618
F L S EENGVQ N +
Sbjct: 901 FTAVPALALKSSTSEENGVQSNHN 924
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++DMA+ YE A P AEA N+GVI+K+R +L+ A+ CY+ L++
Sbjct: 195 YNLGVVYSEMMQYDMALNCYEKAALERPMYAEAYCNMGVIFKNRGDLESAIACYERCLAV 254
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 255 SPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYYKKALCYNWHYADAMYNLGVAYGEML 314
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 315 KFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRDNLDKAVECYQ 358
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y + + A YE A +P A L ++ D N + ++ Y
Sbjct: 123 GILYKDEGRLVEAAESYEKALKADPSYTPAAECLAIVLTDIGTSLKLAGNTQEGIQKYYE 182
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
A+ I +++ + NLGVVY+ + D A EKA P YAEAY N+GV++++ G +
Sbjct: 183 AIKIDSHYAPAYYNLGVVYSEMMQYDMALNCYEKAALERPMYAEAYCNMGVIFKNRGDLE 242
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 243 SAIACYERCLAVSPNFEIAKNNMAIAL 269
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A + H A A NLGV+Y + D A+ CY+ A +P ++++ N+GV++ +
Sbjct: 180 YYE-AIKIDSHYAPAYYNLGVVYSEMMQYDMALNCYEKAALERPMYAEAYCNMGVIFKNR 238
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G +++A E+ +A +P + A NN+ + D G+
Sbjct: 239 GDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGT 274
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + E+ G+ + ++ A E + A+ + P + +L +
Sbjct: 63 KFVDALAIYESVLEKDSKSIESLIGKGICLQMQNTGRLAFESFSEAIKVDPQNACALTHC 122
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G++ AAE EKA+ A+P+Y A L ++ D AG+ I Y +
Sbjct: 123 GILYKDEGRLVEAAESYEKALKADPSYTPAAECLAIVLTDIGTSLKLAGNTQEGIQKYYE 182
Query: 126 CLKID 130
+KID
Sbjct: 183 AIKID 187
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ L +SL G+ +Q A E +AI +P A
Sbjct: 57 ILRSRNKFVDALAIYESVLEKDSKSIESLIGKGICLQMQNTGRLAFESFSEAIKVDPQNA 116
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A + G+LY+D G + A ++YE+ LK DP
Sbjct: 117 CALTHCGILYKDEGRLVEAAESYEKALKADP 147
>gi|75318847|sp|O82422.1|SPY_HORVU RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY; AltName:
Full=HvSPY
gi|3617837|gb|AAC36055.1| gibberellin action negative regulator SPY [Hordeum vulgare subsp.
vulgare]
gi|326515544|dbj|BAK07018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 944
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/565 (85%), Positives = 524/565 (92%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEML F+MAIVFYELA HFNP CAEACNNLGVIYKDRDNLDKAVECYQMALS
Sbjct: 289 MYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALS 348
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAGSI+L++
Sbjct: 349 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAYNNLGVLYRDAGSITLSV 408
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AYE+CL+IDPDSRNAGQNRLLAMNYI+EG DDKL++AHR+WGKRFM+LY+QYTSWDN K
Sbjct: 409 QAYERCLQIDPDSRNAGQNRLLAMNYIDEGSDDKLYDAHREWGKRFMKLYAQYTSWDNPK 468
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+RPLVIGYVSPD+FTHSVSYF+EAPL +HDY KVVVYS VVKADAKT+RF++KV+K
Sbjct: 469 VADRPLVIGYVSPDFFTHSVSYFVEAPLTHHDYTKCKVVVYSGVVKADAKTLRFKDKVLK 528
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEKKVA +VREDK+DILVELTGHTANNKLG MAC+PAP+QVTWIGYPNT
Sbjct: 529 KGGVWRDIYGIDEKKVATLVREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNT 588
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP IDYRITDSLAD P T QKHVEEL+RLPE FLCYTPSPEAGPVCPTPA++NGFITF
Sbjct: 589 TGLPAIDYRITDSLADSPNTNQKHVEELVRLPESFLCYTPSPEAGPVCPTPAISNGFITF 648
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKV+QVWARILCAVPNSRLVVKCKPFCCDS+R +FLSTLE+LGLESLRVD
Sbjct: 649 GSFNNLAKITPKVMQVWARILCAVPNSRLVVKCKPFCCDSIRQKFLSTLEELGLESLRVD 708
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLI LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 709 LLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 768
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
TKVGL L+AK EDEYV LAL LASDV+AL LR SLR+LM KSPVCDG++F GLES Y
Sbjct: 769 TKVGLGRLVAKTEDEYVSLALDLASDVSALEELRKSLRELMIKSPVCDGESFTRGLESAY 828
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQV 565
R+MWHRYC GD P+L+R+E+L Q
Sbjct: 829 RSMWHRYCDGDSPALRRLEVLADQT 853
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM++FD+A+ YE A P AEA N+GVIYK+R LD A+ CY L+I
Sbjct: 181 YNLGVVYSEMMQFDVALTCYEKAALERPLYAEAYCNMGVIYKNRGELDAAIACYDRCLTI 240
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 241 SPNFEIAKNNMAIALTDLGTKVKIEGDINQGVAYYKKALFYNWHYADAMYNLGVAYGEML 300
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+ +AI YE L +P A N L + Y + + DK E ++
Sbjct: 301 NFEMAIVFYELALHFNPRCAEACNN--LGVIYKDRDNLDKAVECYQ 344
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N + ++ Y AL + +++ + NLGVVY+ + D A EKA
Sbjct: 148 DLGTSLKLAGNTEDGIQKYCEALEVDSHYAPAYYNLGVVYSEMMQFDVALTCYEKAALER 207
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + AI Y++CL I P+ A N +A+
Sbjct: 208 PLYAEAYCNMGVIYKNRGELDAAIACYDRCLTISPNFEIAKNNMAIAL 255
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
I Y A + H A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y
Sbjct: 162 GIQKYCEALEVDSHYAPAYYNLGVVYSEMMQFDVALTCYEKAALERPLYAEAYCNMGVIY 221
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+G++DAA ++ + +P + A NN+ + D G+
Sbjct: 222 KNRGELDAAIACYDRCLTISPNFEIAKNNMAIALTDLGT 260
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQS-------L 69
A+ + A +P A A + G+IYKD +L +A E YQ A S P++ + L
Sbjct: 87 ALDCFTEAVKVDPKNACALTHCGMIYKDEGHLVEAAEAYQKARSADPSYKAASEFLAIVL 146
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+LG + G + + +A+ + YA AY NLGV+Y + +A+ YE+
Sbjct: 147 TDLGTSLKLAGNTEDGIQKYCEALEVDSHYAPAYYNLGVVYSEMMQFDVALTCYEK 202
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ Y + EA G+ + + +A++C+ A+ + P + +L +
Sbjct: 49 KFADALQLYTTVLDKDGANVEALIGKGICLQAQSLPRQALDCFTEAVKVDPKNACALTHC 108
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG-SISLA------IDAYEQ 125
G++Y +G + AAE +KA +A+P+Y A L ++ D G S+ LA I Y +
Sbjct: 109 GMIYKDEGHLVEAAEAYQKARSADPSYKAASEFLAIVLTDLGTSLKLAGNTEDGIQKYCE 168
Query: 126 CLKID 130
L++D
Sbjct: 169 ALEVD 173
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A++ Y L ++L G+ Q A + +A+ +P A
Sbjct: 43 ILRSRNKFADALQLYTTVLDKDGANVEALIGKGICLQAQSLPRQALDCFTEAVKVDPKNA 102
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
A + G++Y+D G + A +AY++ DP + A + LA+ + G KL
Sbjct: 103 CALTHCGMIYKDEGHLVEAAEAYQKARSADPSYKAASE--FLAIVLTDLGTSLKLAGNTE 160
Query: 161 DWGKRF 166
D +++
Sbjct: 161 DGIQKY 166
>gi|218201606|gb|EEC84033.1| hypothetical protein OsI_30264 [Oryza sativa Indica Group]
Length = 947
Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/567 (84%), Positives = 528/567 (93%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEML F+MAIVFYELA HFNP CAEACNNLGVIYKDRDNLDKAVECYQMALS
Sbjct: 309 MYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALS 368
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAA+ MI+KAI AN TYAEAYNNLGVLYRDAGSI+ A+
Sbjct: 369 IKPNFSQSLNNLGVVYTVQGKMDAASSMIQKAIFANSTYAEAYNNLGVLYRDAGSITSAV 428
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AYE+CL+IDPDSRNAGQNRLLA+NYI+EG DDKL++AHR+WGKRF++LY QYTSWDN K
Sbjct: 429 QAYEKCLQIDPDSRNAGQNRLLALNYIDEGFDDKLYQAHREWGKRFLKLYPQYTSWDNPK 488
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+RPLVIGYVSPDYFTHSVSYFIEAPL +HDY NYKVVVYS VVKADAKT+RF++KV+K
Sbjct: 489 VADRPLVIGYVSPDYFTHSVSYFIEAPLAHHDYSNYKVVVYSGVVKADAKTLRFKDKVLK 548
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEKKVA++VREDK+DILVELTGHTANNKLG MAC+PAP+QVTWIGYPNT
Sbjct: 549 KGGLWRDIYGIDEKKVASLVREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNT 608
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDSLADPP+T QKHVEEL+RLPE FLCY+PSPEAGPVCPTPA+ NGFITF
Sbjct: 609 TGLPTIDYRITDSLADPPDTTQKHVEELVRLPESFLCYSPSPEAGPVCPTPAILNGFITF 668
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWA+ILCAVPNSRLVVKCKPFCCDS+R +FLSTL +LGLE LRVD
Sbjct: 669 GSFNNLAKITPKVLQVWAKILCAVPNSRLVVKCKPFCCDSIRQKFLSTLAELGLEPLRVD 728
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLI LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 729 LLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 788
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
TKVGL L+AK+E+EYV LAL LA+DVTAL LRMSLR LM+KSPVCDG+NF GLES Y
Sbjct: 789 TKVGLGRLVAKSENEYVSLALDLAADVTALQELRMSLRGLMAKSPVCDGENFTRGLESAY 848
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVS 567
RNMW RYC GD P+L+R+++LQ++ S
Sbjct: 849 RNMWRRYCDGDAPALRRLDLLQEEPCS 875
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM++FD+A+ YE A P AEA N+GVIYK+R L+ A+ CY+ L+I
Sbjct: 201 YNLGVVYSEMMQFDLALTCYEKAALERPLYAEAYCNMGVIYKNRGELEAAIACYERCLTI 260
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 261 SPNFEIAKNNMAIALTDLGTKVKIEGDINQGVAYYKKALFYNWHYADAMYNLGVAYGEML 320
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+ +AI YE L +P A N L + Y + + DK E ++
Sbjct: 321 NFEMAIVFYELALHFNPRCAEACNN--LGVIYKDRDNLDKAVECYQ 364
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N ++ ++ Y AL + +++ + NLGVVY+ + D A EKA
Sbjct: 168 DLGTSLKLAGNTEEGIQKYCEALEVDSHYAPAYYNLGVVYSEMMQFDLALTCYEKAALER 227
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + AI YE+CL I P+ A N +A+
Sbjct: 228 PLYAEAYCNMGVIYKNRGELEAAIACYERCLTISPNFEIAKNNMAIAL 275
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG + + I Y A + H A A NLGV+Y + D A+ CY+ A
Sbjct: 166 LTDLGTSLKLAGNTEEGIQKYCEALEVDSHYAPAYYNLGVVYSEMMQFDLALTCYEKAAL 225
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+P ++++ N+GV+Y +G+++AA E+ + +P + A NN+ + D G+
Sbjct: 226 ERPLYAEAYCNMGVIYKNRGELEAAIACYERCLTISPNFEIAKNNMAIALTDLGT 280
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 32/141 (22%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVE----------------------- 53
AI + A +P A A G+IYKD +L +A E
Sbjct: 82 AIECFNEAVRIDPGNACALTYCGMIYKDEGHLVEAAEFVVINTRSLKCCICGSLKAKYSN 141
Query: 54 --CYQMALSIKPNFSQS-------LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYN 104
YQ A + P++ + L +LG + G + + +A+ + YA AY
Sbjct: 142 AEAYQKARNADPSYKPAAEFLAIVLTDLGTSLKLAGNTEEGIQKYCEALEVDSHYAPAYY 201
Query: 105 NLGVLYRDAGSISLAIDAYEQ 125
NLGV+Y + LA+ YE+
Sbjct: 202 NLGVVYSEMMQFDLALTCYEK 222
>gi|222641017|gb|EEE69149.1| hypothetical protein OsJ_28275 [Oryza sativa Japonica Group]
Length = 947
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/567 (84%), Positives = 528/567 (93%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEML F+MAIVFYELA HFNP CAEACNNLGVIYKDRDNLDKAVECYQMALS
Sbjct: 309 MYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALS 368
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAA+ MI+KAI AN TYAEAYNNLGVLYRDAGSI+ A+
Sbjct: 369 IKPNFSQSLNNLGVVYTVQGKMDAASSMIQKAIFANSTYAEAYNNLGVLYRDAGSITSAV 428
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AYE+CL+IDPDSRNAGQNRLLA+NYI+EG DDKL++AHR+WGKRF++LY QYTSWDN K
Sbjct: 429 QAYEKCLQIDPDSRNAGQNRLLALNYIDEGFDDKLYQAHREWGKRFLKLYPQYTSWDNPK 488
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+RPLVIGYVSPDYFTHSVSYFIEAPL +HDY NYKVVVYS VVKADAKT+RF++KV+K
Sbjct: 489 VADRPLVIGYVSPDYFTHSVSYFIEAPLAHHDYSNYKVVVYSGVVKADAKTLRFKDKVLK 548
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEKKVA++VREDK+DILVELTGHTANNKLG MAC+PAP+QVTWIGYPNT
Sbjct: 549 KGGLWRDIYGIDEKKVASLVREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNT 608
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDSLADPP+T QKHVEEL+RLPE FLCY+PSPEAGPVCPTPA+ NGFITF
Sbjct: 609 TGLPTIDYRITDSLADPPDTTQKHVEELVRLPESFLCYSPSPEAGPVCPTPAILNGFITF 668
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWA+ILCAVPNSRLVVKCKPFCCDS+R +FLSTL +LGLE LRVD
Sbjct: 669 GSFNNLAKITPKVLQVWAKILCAVPNSRLVVKCKPFCCDSIRQKFLSTLAELGLEPLRVD 728
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLI LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 729 LLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 788
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
TKVGL L+AK+E+EYV LAL LA+DVTAL LRMSLR LM+KSPVCDG+NF GLES Y
Sbjct: 789 TKVGLGRLVAKSENEYVSLALDLAADVTALQELRMSLRGLMAKSPVCDGENFTRGLESAY 848
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVS 567
RNMW RYC GD P+L+R+++LQ++ S
Sbjct: 849 RNMWRRYCDGDAPALRRLDLLQEEPCS 875
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM++FD+A+ YE A P AEA N+GVIYK+R L+ A+ CY+ L+I
Sbjct: 201 YNLGVVYSEMMQFDLALTCYEKAALERPLYAEAYCNMGVIYKNRGELEAAIACYERCLTI 260
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 261 SPNFEIAKNNMAIALTDLGTKVKIEGDINQGVAYYKKALFYNWHYADAMYNLGVAYGEML 320
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+ +AI YE L +P A N L + Y + + DK E ++
Sbjct: 321 NFEMAIVFYELALHFNPRCAEACNN--LGVIYKDRDNLDKAVECYQ 364
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N ++ ++ Y AL + +++ + NLGVVY+ + D A EKA
Sbjct: 168 DLGTSLKLAGNTEEGIQKYCEALEVDSHYAPAYYNLGVVYSEMMQFDLALTCYEKAALER 227
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + AI YE+CL I P+ A N +A+
Sbjct: 228 PLYAEAYCNMGVIYKNRGELEAAIACYERCLTISPNFEIAKNNMAIAL 275
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG + + I Y A + H A A NLGV+Y + D A+ CY+ A
Sbjct: 166 LTDLGTSLKLAGNTEEGIQKYCEALEVDSHYAPAYYNLGVVYSEMMQFDLALTCYEKAAL 225
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+P ++++ N+GV+Y +G+++AA E+ + +P + A NN+ + D G+
Sbjct: 226 ERPLYAEAYCNMGVIYKNRGELEAAIACYERCLTISPNFEIAKNNMAIALTDLGT 280
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 32/141 (22%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVE----------------------- 53
AI + A +P A A G+IYKD +L +A E
Sbjct: 82 AIECFNEAVRIDPGNACALTYCGMIYKDEGHLVEAAEFVVINTRSLKCCICGSLKAKYSN 141
Query: 54 --CYQMALSIKPNFSQS-------LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYN 104
YQ A + P++ + L +LG + G + + +A+ + YA AY
Sbjct: 142 AEAYQKARNADPSYKPAAEFLAIVLTDLGTSLKLAGNTEEGIQKYCEALEVDSHYAPAYY 201
Query: 105 NLGVLYRDAGSISLAIDAYEQ 125
NLGV+Y + LA+ YE+
Sbjct: 202 NLGVVYSEMMQFDLALTCYEK 222
>gi|115477811|ref|NP_001062501.1| Os08g0559300 [Oryza sativa Japonica Group]
gi|75325353|sp|Q6YZI0.1|SPY_ORYSJ RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY
gi|45736106|dbj|BAD13137.1| putative gibberellin action negative regulator SPY [Oryza sativa
Japonica Group]
gi|113624470|dbj|BAF24415.1| Os08g0559300 [Oryza sativa Japonica Group]
gi|215686860|dbj|BAG89710.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 927
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/567 (84%), Positives = 528/567 (93%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEML F+MAIVFYELA HFNP CAEACNNLGVIYKDRDNLDKAVECYQMALS
Sbjct: 289 MYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALS 348
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAA+ MI+KAI AN TYAEAYNNLGVLYRDAGSI+ A+
Sbjct: 349 IKPNFSQSLNNLGVVYTVQGKMDAASSMIQKAIFANSTYAEAYNNLGVLYRDAGSITSAV 408
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AYE+CL+IDPDSRNAGQNRLLA+NYI+EG DDKL++AHR+WGKRF++LY QYTSWDN K
Sbjct: 409 QAYEKCLQIDPDSRNAGQNRLLALNYIDEGFDDKLYQAHREWGKRFLKLYPQYTSWDNPK 468
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+RPLVIGYVSPDYFTHSVSYFIEAPL +HDY NYKVVVYS VVKADAKT+RF++KV+K
Sbjct: 469 VADRPLVIGYVSPDYFTHSVSYFIEAPLAHHDYSNYKVVVYSGVVKADAKTLRFKDKVLK 528
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEKKVA++VREDK+DILVELTGHTANNKLG MAC+PAP+QVTWIGYPNT
Sbjct: 529 KGGLWRDIYGIDEKKVASLVREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNT 588
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDSLADPP+T QKHVEEL+RLPE FLCY+PSPEAGPVCPTPA+ NGFITF
Sbjct: 589 TGLPTIDYRITDSLADPPDTTQKHVEELVRLPESFLCYSPSPEAGPVCPTPAILNGFITF 648
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWA+ILCAVPNSRLVVKCKPFCCDS+R +FLSTL +LGLE LRVD
Sbjct: 649 GSFNNLAKITPKVLQVWAKILCAVPNSRLVVKCKPFCCDSIRQKFLSTLAELGLEPLRVD 708
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLI LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 709 LLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 768
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
TKVGL L+AK+E+EYV LAL LA+DVTAL LRMSLR LM+KSPVCDG+NF GLES Y
Sbjct: 769 TKVGLGRLVAKSENEYVSLALDLAADVTALQELRMSLRGLMAKSPVCDGENFTRGLESAY 828
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVS 567
RNMW RYC GD P+L+R+++LQ++ S
Sbjct: 829 RNMWRRYCDGDAPALRRLDLLQEEPCS 855
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM++FD+A+ YE A P AEA N+GVIYK+R L+ A+ CY+ L+I
Sbjct: 181 YNLGVVYSEMMQFDLALTCYEKAALERPLYAEAYCNMGVIYKNRGELEAAIACYERCLTI 240
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 241 SPNFEIAKNNMAIALTDLGTKVKIEGDINQGVAYYKKALFYNWHYADAMYNLGVAYGEML 300
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+ +AI YE L +P A N L + Y + + DK E ++
Sbjct: 301 NFEMAIVFYELALHFNPRCAEACNN--LGVIYKDRDNLDKAVECYQ 344
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N ++ ++ Y AL + +++ + NLGVVY+ + D A EKA
Sbjct: 148 DLGTSLKLAGNTEEGIQKYCEALEVDSHYAPAYYNLGVVYSEMMQFDLALTCYEKAALER 207
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + AI YE+CL I P+ A N +A+
Sbjct: 208 PLYAEAYCNMGVIYKNRGELEAAIACYERCLTISPNFEIAKNNMAIAL 255
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A + H A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +G+++
Sbjct: 169 ALEVDSHYAPAYYNLGVVYSEMMQFDLALTCYEKAALERPLYAEAYCNMGVIYKNRGELE 228
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
AA E+ + +P + A NN+ + D G+
Sbjct: 229 AAIACYERCLTISPNFEIAKNNMAIALTDLGT 260
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ Y + EA G+ + + +A+EC+ A+ I P + +L
Sbjct: 49 KFAEALQLYNNVLEKDEANVEALIGKGICLQAQSLPMQAIECFNEAVRIDPGNACALTYC 108
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G + AAE +KA A+P+Y A L ++ D AG+ I Y +
Sbjct: 109 GMIYKDEGHLVEAAEAYQKARNADPSYKPAAEFLAIVLTDLGTSLKLAGNTEEGIQKYCE 168
Query: 126 CLKID 130
L++D
Sbjct: 169 ALEVD 173
>gi|242081821|ref|XP_002445679.1| hypothetical protein SORBIDRAFT_07g024110 [Sorghum bicolor]
gi|241942029|gb|EES15174.1| hypothetical protein SORBIDRAFT_07g024110 [Sorghum bicolor]
Length = 910
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/621 (78%), Positives = 545/621 (87%), Gaps = 11/621 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEML F+MAIVFYELA HFNP CAEACNNLGVIYKDRDNLDKAVECYQMALS
Sbjct: 289 MYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALS 348
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKP F+QSLNNLGVVYTVQGKMD+AA MIEKAI ANPTYAEAYNNLGVLYRDAGSI+LAI
Sbjct: 349 IKPLFAQSLNNLGVVYTVQGKMDSAASMIEKAIHANPTYAEAYNNLGVLYRDAGSITLAI 408
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AYE+CL+IDPDSRNAGQNRLLAMNYI+EG DDKL+EAHR+WGKRFM+LY QYT WDNTK
Sbjct: 409 HAYERCLQIDPDSRNAGQNRLLAMNYIDEGSDDKLYEAHREWGKRFMKLYPQYTCWDNTK 468
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+RPL+IGY+SPDYFTHSVSYFIEAPL +HDY N KVVVYS VVKADAKT+RF+++V+K
Sbjct: 469 VADRPLIIGYLSPDYFTHSVSYFIEAPLTHHDYTNCKVVVYSGVVKADAKTLRFKDRVLK 528
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEK+VA++VREDK+DILVELTGHTANNKLG MAC+PAP+QVTWIGYPNT
Sbjct: 529 KGGLWRDIYGIDEKRVASLVREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNT 588
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRI+DSLADPP TKQKHVEEL+RLPE FLCYTPSPEAGP+CPTPA++NGF+TF
Sbjct: 589 TGLPTIDYRISDSLADPPITKQKHVEELVRLPESFLCYTPSPEAGPICPTPAISNGFVTF 648
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCC+++R +FLSTLE+LGLESLRVD
Sbjct: 649 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCENIRQKFLSTLEELGLESLRVD 708
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLI LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG+VHAHNVGVSLL
Sbjct: 709 LLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGAVHAHNVGVSLL 768
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+KVGL L+AK EDEYV LAL LASDV AL LRMSLR+LM KSPVCDG+ F GLE+ Y
Sbjct: 769 SKVGLGRLVAKTEDEYVSLALGLASDVNALQELRMSLRELMMKSPVCDGEKFTRGLEAAY 828
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKI---------IFAKEGSPGSVM 591
R+MW RYC GDVPSL+R+E+L++ V +P K+ + +E +M
Sbjct: 829 RDMWRRYCDGDVPSLRRLELLEEHPVVNKPDSDKTSEKLADLKAQRAGVTVEEDKQPPIM 888
Query: 592 PNGFNQASPSMLNLSNIEENG 612
NG SP + E NG
Sbjct: 889 ANGVR--SPDSPAPAKCEANG 907
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM++F+MA+ YE A P AEA N+GVIYK+R +L+ A+ CY+ L+I
Sbjct: 181 YNLGVVYSEMMQFEMALSCYEKAALERPLYAEAYCNMGVIYKNRGDLEAAIACYERCLTI 240
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 241 SPNFEIAKNNMAIALTDLGTKVKIEGDINQGVAYYKKALFYNWHYADAMYNLGVAYGEML 300
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+ +AI YE L +P A N L + Y + + DK E ++
Sbjct: 301 NFEMAIVFYELALHFNPRCAEACNN--LGVIYKDRDNLDKAVECYQ 344
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N ++ ++ Y AL + +++ + NLGVVY+ + + A EKA
Sbjct: 148 DLGTSLKLAGNTEEGIQKYCEALEVDNHYAPAYYNLGVVYSEMMQFEMALSCYEKAALER 207
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + AI YE+CL I P+ A N +A+
Sbjct: 208 PLYAEAYCNMGVIYKNRGDLEAAIACYERCLTISPNFEIAKNNMAIAL 255
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ Y + EA G+ + ++ +A+EC+ + I+P + +L +
Sbjct: 49 KFTDAVNLYNIVLEKEGTNVEALIGKGICLQAQNLPRQAIECFTEVVKIEPGNACALTHC 108
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G + AAE +KA A+P+Y A L ++ D AG+ I Y +
Sbjct: 109 GMIYKDEGHLVEAAEAYQKARTADPSYKPASELLAIVLTDLGTSLKLAGNTEEGIQKYCE 168
Query: 126 CLKID 130
L++D
Sbjct: 169 ALEVD 173
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ AV Y + L + ++L G+ Q A E + + P A
Sbjct: 43 ILRSRNKFTDAVNLYNIVLEKEGTNVEALIGKGICLQAQNLPRQAIECFTEVVKIEPGNA 102
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
A + G++Y+D G + A +AY++ DP + A + LLA+ + G KL
Sbjct: 103 CALTHCGMIYKDEGHLVEAAEAYQKARTADPSYKPASE--LLAIVLTDLGTSLKL 155
>gi|63095209|gb|AAY32335.1| SPY [Phyllostachys praecox]
Length = 781
Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/564 (85%), Positives = 523/564 (92%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEML F+MAIVFYELA HFNP CAEACN+LGVIYKDRDNLDKAVECY +ALS
Sbjct: 145 MYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNSLGVIYKDRDNLDKAVECYLLALS 204
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKP+FSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAGSI+LA+
Sbjct: 205 IKPSFSQSLNNLGVVYTVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGSITLAV 264
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AYE+CL+IDPDSRNAGQNRLLAMNYI+EG DDKL+EAHR+WG+RFM+L QYT+WDN+K
Sbjct: 265 QAYERCLQIDPDSRNAGQNRLLAMNYIDEGSDDKLYEAHREWGERFMKLCPQYTTWDNSK 324
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+RPLVIGYVSPDYFTHSVSYFIEAPL +HDY NYKVVVYS VVKADAKT+RF++KV+K
Sbjct: 325 VADRPLVIGYVSPDYFTHSVSYFIEAPLTHHDYTNYKVVVYSGVVKADAKTLRFKDKVLK 384
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEKKVA++VREDK+DILVELTGHTANNKLG MA +PAP+QVTWIGYPNT
Sbjct: 385 KGGLWRDIYGIDEKKVASLVREDKVDILVELTGHTANNKLGTMARRPAPIQVTWIGYPNT 444
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRITDS ADPP T QKHVEEL+RLPE FLCYTPSPEAGPVCPTPA++NGFITF
Sbjct: 445 TGLPTIDYRITDSFADPPNTNQKHVEELVRLPESFLCYTPSPEAGPVCPTPAISNGFITF 504
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS+R +FLSTLE+LG ESLRVD
Sbjct: 505 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSIRQKFLSTLEELGSESLRVD 564
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLI LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH HNVGVSLL
Sbjct: 565 LLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHGHNVGVSLL 624
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
TKVGL L+AK EDEY+ LAL LASDVTAL LRMSLR LM KS VCDG+NF GLES Y
Sbjct: 625 TKVGLGRLVAKPEDEYISLALDLASDVTALLELRMSLRKLMIKSSVCDGENFTRGLESAY 684
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQ 564
RNMW RYC GD P+L+R+E+LQ+Q
Sbjct: 685 RNMWCRYCDGDAPALRRLEVLQEQ 708
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 9/165 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM +FD+A+ YE A P AEA N+GVIYK R L+ A+ CY+ L+I
Sbjct: 37 YNLGVVYSEMTQFDLALTCYEKAALERPLYAEAYCNMGVIYKSRGELEAAIACYERCLTI 96
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ +V T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 97 SPNFEIAKNNMAIVLTDLGTKVKIEGDINQGVAYYKKALFYNWHYADAMYNLGVAYGEML 156
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH 159
+ +AI YE L +P R A L + Y + + DK E +
Sbjct: 157 NFEMAIVFYELALHFNP--RCAEACNSLGVIYKDRDNLDKAVECY 199
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N ++ ++ Y AL + +++ + NLGVVY+ + D A EKA
Sbjct: 4 DLGTSLKLAGNTEEGIQKYCEALEVDSHYAPAYYNLGVVYSEMTQFDLALTCYEKAALER 63
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y+ G + AI YE+CL I P+ A N + +
Sbjct: 64 PLYAEAYCNMGVIYKSRGELEAAIACYERCLTISPNFEIAKNNMAIVL 111
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG + + I Y A + H A A NLGV+Y + D A+ CY+ A
Sbjct: 2 LTDLGTSLKLAGNTEEGIQKYCEALEVDSHYAPAYYNLGVVYSEMTQFDLALTCYEKAAL 61
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+P ++++ N+GV+Y +G+++AA E+ + +P + A NN+ ++ D G+
Sbjct: 62 ERPLYAEAYCNMGVIYKSRGELEAAIACYERCLTISPNFEIAKNNMAIVLTDLGT 116
>gi|357148919|ref|XP_003574938.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like
[Brachypodium distachyon]
Length = 959
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/569 (84%), Positives = 523/569 (91%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEML F+MAIV YELA HFNP CAEACNNLGVIYKDRDNLD+AVECYQMAL+
Sbjct: 294 MYNLGVAYGEMLNFEMAIVSYELALHFNPRCAEACNNLGVIYKDRDNLDRAVECYQMALT 353
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAGSI+L++
Sbjct: 354 IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAYNNLGVLYRDAGSITLSV 413
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AYE+CL+IDPDSRNAGQNRLLAMNYI+EG DDKL+ AHR+WGKRFM++Y+QYTSWDN+K
Sbjct: 414 QAYERCLQIDPDSRNAGQNRLLAMNYIDEGSDDKLYNAHREWGKRFMKMYAQYTSWDNSK 473
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+RPLVIGYVSPD+FTHSVSYF+EAPL +HDY N KVVVYS VVKADAKT+RF++KV+K
Sbjct: 474 VADRPLVIGYVSPDFFTHSVSYFVEAPLAHHDYSNCKVVVYSGVVKADAKTLRFKDKVLK 533
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEK+VA+MVREDK+DILVELTGHTANNKLG MAC+PAP+QVTWIGYPNT
Sbjct: 534 KGGVWRDIYGIDEKRVASMVREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNT 593
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP IDYRITDSLAD P T QKHVEEL+RLPE FLCYTPSPEAGPVCPTPA++N FITF
Sbjct: 594 TGLPAIDYRITDSLADSPNTNQKHVEELVRLPESFLCYTPSPEAGPVCPTPAISNNFITF 653
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPF CDS+R +FLSTLE+LGLES+RVD
Sbjct: 654 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFGCDSIRQKFLSTLEELGLESIRVD 713
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLI LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL
Sbjct: 714 LLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 773
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
TKVGL L+AK+EDEYV LAL LASDV AL LRMSLR+ M KSPVCDG+ F GLES Y
Sbjct: 774 TKVGLGRLVAKSEDEYVSLALDLASDVGALQELRMSLREQMIKSPVCDGEGFTRGLESAY 833
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEE 569
RNMW RYC GD P+L R E+L+ Q VS +
Sbjct: 834 RNMWRRYCDGDSPALSRPELLEDQPVSNK 862
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM++FD+A+ YE A P AEA NLGVIYK+R +LD A+ CY+ L+I
Sbjct: 186 YNLGVVYSEMMQFDVALTCYEKAAIERPLYAEAYCNLGVIYKNRGDLDAAIACYERCLTI 245
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G + +KA+ N YA+A NLGV Y +
Sbjct: 246 SPNFEIAKNNMAIALTDLGTKVKIEGDIKQGVAYYKKALFYNWHYADAMYNLGVAYGEML 305
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+ +AI +YE L +P A N L + Y + + D+ E ++
Sbjct: 306 NFEMAIVSYELALHFNPRCAEACNN--LGVIYKDRDNLDRAVECYQ 349
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N ++ ++ Y AL + +++ + NLGVVY+ + D A EKA
Sbjct: 153 DLGTKLKLAGNTEEGIQKYCEALEVDTHYAPAYYNLGVVYSEMMQFDVALTCYEKAAIER 212
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY NLGV+Y++ G + AI YE+CL I P+ A N +A+
Sbjct: 213 PLYAEAYCNLGVIYKNRGDLDAAIACYERCLTISPNFEIAKNNMAIAL 260
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
I Y A + H A A NLGV+Y + D A+ CY+ A +P ++++ NLGV+Y
Sbjct: 167 GIQKYCEALEVDTHYAPAYYNLGVVYSEMMQFDVALTCYEKAAIERPLYAEAYCNLGVIY 226
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+G +DAA E+ + +P + A NN+ + D G+
Sbjct: 227 KNRGDLDAAIACYERCLTISPNFEIAKNNMAIALTDLGT 265
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ Y + EA G+ + ++ +A+EC+ A+ + PN + +L +
Sbjct: 54 KFADALQLYSTVLEKDGTNVEALIGKGICLQAQNLPKQALECFTEAVKVDPNNACALTHC 113
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G + AAE +KA +A+P+Y A L ++ D AG+ I Y +
Sbjct: 114 GMIYKDEGHLVEAAEAYQKARSADPSYKPAAEFLAIVLTDLGTKLKLAGNTEEGIQKYCE 173
Query: 126 CLKID 130
L++D
Sbjct: 174 ALEVD 178
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A++ Y L ++L G+ Q A E +A+ +P A
Sbjct: 48 ILRSRNKFADALQLYSTVLEKDGTNVEALIGKGICLQAQNLPKQALECFTEAVKVDPNNA 107
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A + G++Y+D G + A +AY++ DP + A +
Sbjct: 108 CALTHCGMIYKDEGHLVEAAEAYQKARSADPSYKPAAE 145
>gi|326512858|dbj|BAK03336.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 644
Score = 1006 bits (2602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/548 (84%), Positives = 507/548 (92%)
Query: 18 IVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYT 77
+ FYELA HFNP CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYT
Sbjct: 6 LFFYELALHFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYT 65
Query: 78 VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137
VQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAGSI+L++ AYE+CL+IDPDSRNAG
Sbjct: 66 VQGKMDAAASMIEKAILANPTYAEAYNNLGVLYRDAGSITLSVQAYERCLQIDPDSRNAG 125
Query: 138 QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFT 197
QNRLLAMNYI+EG DDKL++AHR+WGKRFM+LY+QYTSWDN K +RPLVIGYVSPD+FT
Sbjct: 126 QNRLLAMNYIDEGSDDKLYDAHREWGKRFMKLYAQYTSWDNPKVADRPLVIGYVSPDFFT 185
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
HSVSYF+EAPL +HDY KVVVYS VVKADAKT+RF++KV+KKGG+WRDIYGIDEKKVA
Sbjct: 186 HSVSYFVEAPLTHHDYTKCKVVVYSGVVKADAKTLRFKDKVLKKGGVWRDIYGIDEKKVA 245
Query: 258 AMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
+VREDK+DILVELTGHTANNKLG MAC+PAP+QVTWIGYPNTTGLP IDYRITDSLAD
Sbjct: 246 TLVREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNTTGLPAIDYRITDSLADS 305
Query: 318 PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
P T QKHVEEL+RLPE FLCYTPSPEAGPVCPTPA++NGFITFGSFNNLAKITPKV+QVW
Sbjct: 306 PNTNQKHVEELVRLPESFLCYTPSPEAGPVCPTPAISNGFITFGSFNNLAKITPKVMQVW 365
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
ARILCAVPNSRLVVKCKPFCCDS+R +FLSTLE+LGLESLRVDLLPLI LNHDHMQAYSL
Sbjct: 366 ARILCAVPNSRLVVKCKPFCCDSIRQKFLSTLEELGLESLRVDLLPLIHLNHDHMQAYSL 425
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL L+AK EDEYV
Sbjct: 426 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLGRLVAKTEDEYV 485
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKR 557
LAL LASDV+AL LR SLR+LM KSPVCDG++F GLES YR+MWHRYC GD P+L+R
Sbjct: 486 SLALDLASDVSALEELRKSLRELMIKSPVCDGESFTRGLESAYRSMWHRYCDGDSPALRR 545
Query: 558 MEMLQQQV 565
+E+L Q
Sbjct: 546 LEVLADQT 553
>gi|168066691|ref|XP_001785267.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663137|gb|EDQ49919.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 910
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/586 (75%), Positives = 507/586 (86%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGE+LKFDMA+V YELA HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL
Sbjct: 278 MYNLGVAYGELLKFDMAVVMYELALHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALQ 337
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMD+AA MIEKAI ANP+YAEAYNNLGVL+RDAG+I LAI
Sbjct: 338 IKPNFSQSLNNLGVVYTVQGKMDSAAAMIEKAILANPSYAEAYNNLGVLHRDAGNIPLAI 397
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
DAYE+CL DPDSRNAGQNRLLAMNYI E DDKL+ AHR WGKRF RLY ++T+W N K
Sbjct: 398 DAYERCLLFDPDSRNAGQNRLLAMNYIYESDDDKLYNAHRSWGKRFNRLYPEFTTWSNIK 457
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+ +R L IGY+SPDYFTHSVSYFIEAPL++HDY +Y +VVYSAVVK DAKT RF+E V+K
Sbjct: 458 ERDRSLTIGYISPDYFTHSVSYFIEAPLLHHDYTHYHIVVYSAVVKTDAKTQRFKETVLK 517
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGGIWR+++GIDEKK+A MVREDK+DILVELTGHTANN+LG+MAC+PAP+Q TWIGY NT
Sbjct: 518 KGGIWREVFGIDEKKLANMVREDKVDILVELTGHTANNRLGVMACRPAPIQATWIGYSNT 577
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYR TD+LADPP T QKHVEEL+RLP CFLCYTPSPE+GPV PTPAL+NGF+TF
Sbjct: 578 TGLPTIDYRFTDALADPPTTLQKHVEELVRLPGCFLCYTPSPESGPVVPTPALSNGFVTF 637
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITP+VL+VWARIL +P++RLVVKCKPFCCDSVR FL+ LE+LG+ESLR+D
Sbjct: 638 GSFNNLAKITPRVLRVWARILIKMPSARLVVKCKPFCCDSVREAFLAKLEELGVESLRID 697
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAY LMDISLDTFPYAGTTTTCESLYMGVPCVTMAG VHAHNVGV+LL
Sbjct: 698 LLPLILLNHDHMQAYCLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGKVHAHNVGVTLL 757
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+VGL++L+ K EDEYV A++LAS+V++LA+LR LR+ M S +CDG F GLE Y
Sbjct: 758 HQVGLENLVVKTEDEYVDKAIELASNVSSLASLRNGLRERMLSSYLCDGPKFVKGLEEKY 817
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGS 586
++WHRYC GDVP R + + +VS S + T + + GS
Sbjct: 818 LHLWHRYCDGDVPYETRKKAEDEALVSRSASTTGDVTDLPMKEAGS 863
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y E A Y A P A NL ++ D ++ + + Y
Sbjct: 97 GMLYKEEGHLLEAAEAYRKALLTEPTYKAASENLAIVLTDLGTSLKLSGHIQEGLTKYYD 156
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL ++ + NLGVVY+ + D A EKA A P YAEAY N+GV+Y++ G +
Sbjct: 157 ALKADSRYAPAYYNLGVVYSEMMQYDMALSCYEKAAANRPMYAEAYCNMGVIYKNRGDLD 216
Query: 118 LAIDAYE-QCLKIDPDSRNAGQNRLLAM 144
AI YE +CL + P+ A N +A+
Sbjct: 217 AAISCYESRCLALSPNFEIAKNNMAIAL 244
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYT--- 77
++ A + A A + G++YK+ +L +A E Y+ AL +P + + NL +V T
Sbjct: 79 FQNALQLDAQNACALTHCGMLYKEEGHLLEAAEAYRKALLTEPTYKAASENLAIVLTDLG 138
Query: 78 ----VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ G + A+ A+ YA AY NLGV+Y + +A+ YE+ P
Sbjct: 139 TSLKLSGHIQEGLTKYYDALKADSRYAPAYYNLGVVYSEMMQYDMALSCYEKAAANRPMY 198
Query: 134 RNAGQNRLLAMNYINEGHDD 153
A N + + Y N G D
Sbjct: 199 AEAYCN--MGVIYKNRGDLD 216
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ YE P EA G+ + ++ A E +Q AL + + +L + G++Y
Sbjct: 41 ALALYESILEVEPQNVEAHVGKGICLQLQNLHRPAFESFQNALQLDAQNACALTHCGMLY 100
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQCLKI 129
+G + AAE KA+ PTY A NL ++ D +G I + Y LK
Sbjct: 101 KEEGHLLEAAEAYRKALLTEPTYKAASENLAIVLTDLGTSLKLSGHIQEGLTKYYDALKA 160
Query: 130 D 130
D
Sbjct: 161 D 161
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+ + + R+ + A+ Y+ L ++P ++ G+ +Q A E + A+ +
Sbjct: 27 SFAAVLRSRNKIVDALALYESILEVEPQNVEAHVGKGICLQLQNLHRPAFESFQNALQLD 86
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A A + G+LY++ G + A +AY + L +P + A +N
Sbjct: 87 AQNACALTHCGMLYKEEGHLLEAAEAYRKALLTEPTYKAASEN 129
>gi|168061951|ref|XP_001782948.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665566|gb|EDQ52246.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 899
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/567 (77%), Positives = 501/567 (88%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGE+LKFDMA+V YELA HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL
Sbjct: 278 MYNLGVAYGELLKFDMAVVMYELALHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALQ 337
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNFSQSLNNLGVVYTVQGKMD+AA MIEKAI ANP+YAEAYNNLGVL+RDAG+I LAI
Sbjct: 338 IKPNFSQSLNNLGVVYTVQGKMDSAASMIEKAILANPSYAEAYNNLGVLHRDAGNIPLAI 397
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
DAYE+CL IDPDSRNAGQNRLLAMNYI EG DDKL+ H DWGKRF RLY ++T+W N+K
Sbjct: 398 DAYERCLVIDPDSRNAGQNRLLAMNYIYEGDDDKLYNVHSDWGKRFSRLYPEFTTWSNSK 457
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
D +R L IGY+SPDYFTHSVSYFIEAPL+++D+ N+ +VVYSAVVK DAKT RF++ V+K
Sbjct: 458 DRDRVLTIGYISPDYFTHSVSYFIEAPLLHYDFTNFHLVVYSAVVKTDAKTQRFKDTVLK 517
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WR++YGIDEKKVA MV+EDK+DILVELTGHTANN+LG+MA +PAP+Q+TWIGYPNT
Sbjct: 518 KGGVWREVYGIDEKKVANMVKEDKVDILVELTGHTANNRLGVMARRPAPIQITWIGYPNT 577
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGL TIDYR TD+LADPP T QKHVEEL+RLPECFLCYTPSPE GP+ P+PAL+NGF+TF
Sbjct: 578 TGLSTIDYRFTDALADPPNTTQKHVEELVRLPECFLCYTPSPETGPIVPSPALSNGFVTF 637
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITP+VL+VWARIL VP +RLVVKCKPFCCDSVR FLS LE+LG++SLRVD
Sbjct: 638 GSFNNLAKITPRVLRVWARILIKVPTARLVVKCKPFCCDSVRDTFLSKLEELGVKSLRVD 697
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG VHAHNVGV+LL
Sbjct: 698 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGKVHAHNVGVTLL 757
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+VGL++L+ + ED+YV A+QLAS+ ++LA LR LR+ M KS +CDG F GLE TY
Sbjct: 758 HQVGLENLVVRTEDDYVDKAVQLASNTSSLAALRNGLREKMLKSYLCDGPKFVRGLEDTY 817
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVS 567
R +WHRYC GDVP R + +VS
Sbjct: 818 RQLWHRYCDGDVPYETRKKAENNALVS 844
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y E A Y A +P A NL V+ D ++ + + Y
Sbjct: 97 GILYKEEGHLLEAAEAYRKALMADPTYKAASENLAVVLTDLGTSLKLSGHVQEGLAKYYD 156
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL ++ + NLGVVY+ + D A EKA A P YAEAY N+GV+Y++ G +
Sbjct: 157 ALKADSRYAPAYYNLGVVYSEMMQYDMALSCYEKAAANRPMYAEAYCNMGVIYKNRGDLD 216
Query: 118 LAIDAYE-QCLKIDPDSRNAGQNRLLAM 144
AI YE +CL + P+ A N +A+
Sbjct: 217 AAISCYESRCLAVSPNFEIAKNNMAIAL 244
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ YE P EA G+ + ++ A E ++ AL + + +L + G++Y
Sbjct: 41 ALAIYESILEVEPQNVEAHVGKGICLQVQNLPRPAFESFRKALQLDAQNACALTHCGILY 100
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+G + AAE KA+ A+PTY A NL V+ D G+ SL + + Q
Sbjct: 101 KEEGHLLEAAEAYRKALMADPTYKAASENLAVVLTDLGT-SLKLSGHVQ 148
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ + A+ Y+ L ++P ++ G+ VQ A E KA+ + A
Sbjct: 31 ILRSRNKIVDALAIYESILEVEPQNVEAHVGKGICLQVQNLPRPAFESFRKALQLDAQNA 90
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A + G+LY++ G + A +AY + L DP + A +N
Sbjct: 91 CALTHCGILYKEEGHLLEAAEAYRKALMADPTYKAASEN 129
>gi|302821262|ref|XP_002992295.1| peptide N-acetylglucosaminyltransferase [Selaginella
moellendorffii]
gi|300139945|gb|EFJ06676.1| peptide N-acetylglucosaminyltransferase [Selaginella
moellendorffii]
Length = 933
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/559 (77%), Positives = 504/559 (90%), Gaps = 1/559 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMA+V YELA HFNP CAEACNNLGVIYKDRDNLD+AVECYQMAL+
Sbjct: 340 MYNLGVAYGEMLKFDMAVVMYELALHFNPQCAEACNNLGVIYKDRDNLDRAVECYQMALT 399
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKP+FSQSLNNLGVVYTVQGKMD+A+ MIEKAI ANP+YAEAYNNLGVL+RDAG+I LAI
Sbjct: 400 IKPDFSQSLNNLGVVYTVQGKMDSASAMIEKAILANPSYAEAYNNLGVLHRDAGNIYLAI 459
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AYE+CL+ID DSRNAGQNRLLAMNYI E +DKL+ AHRDWGKRF+RLYS YT+W N+K
Sbjct: 460 EAYERCLRIDSDSRNAGQNRLLAMNYIYE-DEDKLYHAHRDWGKRFLRLYSPYTTWSNSK 518
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+P+RPL IGY+SPDYFTHSVSYFIEAPL++HDY NY+VVVYSAVVKADAKT RF++ V+K
Sbjct: 519 EPDRPLTIGYISPDYFTHSVSYFIEAPLMHHDYSNYRVVVYSAVVKADAKTQRFKDAVLK 578
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
GG+W+++YGIDEKKVAA+VRED +DILVELTGHTANNKLG+MAC+PAP+Q TWIGYPNT
Sbjct: 579 NGGMWKEVYGIDEKKVAALVREDNVDILVELTGHTANNKLGVMACRPAPLQATWIGYPNT 638
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGL TIDYR TDSLADPP+T+Q+HVEEL+RLP CFLCYTPS EAGP+ PALTNGF+TF
Sbjct: 639 TGLATIDYRFTDSLADPPDTRQRHVEELVRLPGCFLCYTPSAEAGPIVQAPALTNGFVTF 698
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITP+V++VWARILCAVP +RLVVKCKPFCCD +R +FL+ E+LG++ +R+D
Sbjct: 699 GSFNNLAKITPRVVRVWARILCAVPTARLVVKCKPFCCDGIRDKFLAKFEELGVQPMRLD 758
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLILLNHDHMQAYS MDISLDTFPYAGTTTTCESLYMG+PCVTMAG VHA+NVGV+LL
Sbjct: 759 LLPLILLNHDHMQAYSFMDISLDTFPYAGTTTTCESLYMGIPCVTMAGKVHANNVGVTLL 818
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
++VGL +LIA+ EDEYV+ A+ LASDV+ L+ LR LRD M KS +C+G +F GLE+ Y
Sbjct: 819 SQVGLCNLIARTEDEYVKKAVDLASDVSKLSALRTGLRDRMLKSQLCNGPSFVQGLEAAY 878
Query: 541 RNMWHRYCKGDVPSLKRME 559
R +W RYC+G VPSL R+
Sbjct: 879 RTLWQRYCQGIVPSLVRLR 897
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECYQM 57
G+ Y E A Y+ A +P A +L V+ D N+ ++ Y
Sbjct: 160 GILYKEEGHLLEASEAYQKALQADPKYKPALESLAVVLTDIGTSLKLSGNVHDGMQKYFE 219
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL ++ + NLGVVY+ + D A EKA A P YAEAY N+GV+Y++ G +
Sbjct: 220 ALRADATYAPAFYNLGVVYSEMLQYDTALNCYEKAAAHRPMYAEAYCNMGVIYKNRGDLD 279
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAM 144
AI YE+CL + P+ A N +A+
Sbjct: 280 AAIACYERCLAVSPNFEIAKNNMAIAL 306
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 6 VAYGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+AY E+L KF A + Y+ P C +A + GV + + N +A+EC+ AL +
Sbjct: 89 LAYAEILLSRSKFADAQLLYKSVLEAEPSCVQALVSKGVCLQMQGNARQALECFASALKL 148
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
P+ +++L G++Y +G + A+E +KA+ A+P Y A +L V+ D G+
Sbjct: 149 DPSNARALTQCGILYKEEGHLLEASEAYQKALQADPKYKPALESLAVVLTDIGT 202
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A A NLGV+Y + D A+ CY+ A + +P ++++ N+GV+Y +G +DAA E+
Sbjct: 228 APAFYNLGVVYSEMLQYDTALNCYEKAAAHRPMYAEAYCNMGVIYKNRGDLDAAIACYER 287
Query: 92 AIAANPTYAEAYNNLGVLYRDAGS 115
+A +P + A NN+ + D G+
Sbjct: 288 CLAVSPNFEIAKNNMAIALTDLGT 311
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I R A Y+ L +P+ Q+L + GV +QG A E A+ +P+ A
Sbjct: 94 ILLSRSKFADAQLLYKSVLEAEPSCVQALVSKGVCLQMQGNARQALECFASALKLDPSNA 153
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG-------HD- 152
A G+LY++ G + A +AY++ L+ DP + A ++ + + I HD
Sbjct: 154 RALTQCGILYKEEGHLLEASEAYQKALQADPKYKPALESLAVVLTDIGTSLKLSGNVHDG 213
Query: 153 -DKLFEAHR 160
K FEA R
Sbjct: 214 MQKYFEALR 222
>gi|414870070|tpg|DAA48627.1| TPA: hypothetical protein ZEAMMB73_519907, partial [Zea mays]
gi|414870071|tpg|DAA48628.1| TPA: hypothetical protein ZEAMMB73_519907, partial [Zea mays]
gi|414870072|tpg|DAA48629.1| TPA: hypothetical protein ZEAMMB73_519907, partial [Zea mays]
Length = 786
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/496 (86%), Positives = 470/496 (94%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEML F+MAIVFYELA HFNP CAEACNNLGVIYKDRDNLDKAVECYQMALS
Sbjct: 289 MYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALS 348
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKP F+QSLNNLGVVYTVQGKMD+AA MIEKAI ANPTYAEAYNNLGVLYRDAGSI+LAI
Sbjct: 349 IKPLFAQSLNNLGVVYTVQGKMDSAASMIEKAIHANPTYAEAYNNLGVLYRDAGSITLAI 408
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AYE+CL+IDPDSRNAGQNRLLAMNYI+EG DDKL+EAHR+WGKRFM+LY QYTSWDN+K
Sbjct: 409 HAYERCLQIDPDSRNAGQNRLLAMNYIDEGSDDKLYEAHREWGKRFMKLYPQYTSWDNSK 468
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+RPL+IGY+SPDYFTHSVSYFIEAPL +HD KVVVYS VVKADAKT+RF++KV+K
Sbjct: 469 VADRPLIIGYLSPDYFTHSVSYFIEAPLTHHDSTVCKVVVYSGVVKADAKTLRFKDKVLK 528
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
KGG+WRDIYGIDEK+VA++VREDK+DILVELTGHTANNKLG MAC+PAP+QVTWIGYPNT
Sbjct: 529 KGGLWRDIYGIDEKRVASLVREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNT 588
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDYRI+DSL DPP TKQKHVEEL+RLPE FLCYTPSPEAGPVCPTPA++NGF+TF
Sbjct: 589 TGLPTIDYRISDSLTDPPMTKQKHVEELVRLPESFLCYTPSPEAGPVCPTPAISNGFVTF 648
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNLAKITPKVLQVWARILC+VPNSRLVVKCKPFCC+++R +FL+TLE+LGLESLRVD
Sbjct: 649 GSFNNLAKITPKVLQVWARILCSVPNSRLVVKCKPFCCENIRQKFLATLEELGLESLRVD 708
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLPLI LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG+VHAHNVGVSLL
Sbjct: 709 LLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGAVHAHNVGVSLL 768
Query: 481 TKVGLKHLIAKNEDEY 496
+KVGL L+AK EDEY
Sbjct: 769 SKVGLGRLVAKTEDEY 784
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM++FDMA+ YE A P AEA N+GVIYK+R +LD A+ CY+ L+I
Sbjct: 181 YNLGVVYSEMMQFDMALSCYEKAALERPLYAEAYCNMGVIYKNRGDLDAAIICYERCLTI 240
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 241 SPNFEIAKNNMAIALTDLGTKVKIEGDINRGVAYYKKALYYNWHYADAMYNLGVAYGEML 300
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+ +AI YE L +P A N L + Y + + DK E ++
Sbjct: 301 NFEMAIVFYELALHFNPRCAEACNN--LGVIYKDRDNLDKAVECYQ 344
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N ++ ++ Y AL + +++ + NLGVVY+ + D A EKA
Sbjct: 148 DLGTSLKLAGNTEEGIQKYCEALEVDNHYAPAYYNLGVVYSEMMQFDMALSCYEKAALER 207
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + AI YE+CL I P+ A N +A+
Sbjct: 208 PLYAEAYCNMGVIYKNRGDLDAAIICYERCLTISPNFEIAKNNMAIAL 255
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A + H A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +G +D
Sbjct: 169 ALEVDNHYAPAYYNLGVVYSEMMQFDMALSCYEKAALERPLYAEAYCNMGVIYKNRGDLD 228
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
AA E+ + +P + A NN+ + D G+
Sbjct: 229 AAIICYERCLTISPNFEIAKNNMAIALTDLGT 260
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF AI Y + + EA G+ + ++ +A+EC+ A+ I+P + +L +
Sbjct: 49 KFADAINLYTIVLEKDGTNVEALIGKGICLQAQNLPRQAIECFTEAVKIEPGNASALTHC 108
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G + AAE +KA A+P+Y A L ++ D AG+ I Y +
Sbjct: 109 GMIYKDEGHLVEAAEAYQKARMADPSYKPASEFLAIVLTDLGTSLKLAGNTEEGIQKYCE 168
Query: 126 CLKID 130
L++D
Sbjct: 169 ALEVD 173
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y + L ++L G+ Q A E +A+ P A
Sbjct: 43 ILRSRNKFADAINLYTIVLEKDGTNVEALIGKGICLQAQNLPRQAIECFTEAVKIEPGNA 102
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A + G++Y+D G + A +AY++ DP + A +
Sbjct: 103 SALTHCGMIYKDEGHLVEAAEAYQKARMADPSYKPASE 140
>gi|212274891|ref|NP_001130413.1| uncharacterized protein LOC100191509 [Zea mays]
gi|194689056|gb|ACF78612.1| unknown [Zea mays]
Length = 567
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/565 (76%), Positives = 490/565 (86%), Gaps = 11/565 (1%)
Query: 57 MALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI 116
MALSIKP F+QSLNNLGVVYTVQGKMD+AA MIEKAI ANPTYAEAYNNLGVLYRDAGSI
Sbjct: 1 MALSIKPLFAQSLNNLGVVYTVQGKMDSAASMIEKAIHANPTYAEAYNNLGVLYRDAGSI 60
Query: 117 SLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
+LAI AYE+CL+IDPDSRNAGQNRLLAMNYI+EG DDKL+EAHR+WGKRFM+LY QYTSW
Sbjct: 61 TLAIHAYERCLQIDPDSRNAGQNRLLAMNYIDEGSDDKLYEAHREWGKRFMKLYPQYTSW 120
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
DN+K +RPL+IGY+SPDYFTHSVSYFIEAPL +HD KVVVYS VVKADAKT+RF++
Sbjct: 121 DNSKVADRPLIIGYLSPDYFTHSVSYFIEAPLTHHDSTVCKVVVYSGVVKADAKTLRFKD 180
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
KV+KKGG+WRDIYGIDEK+VA++VREDK+DILVELTGHTANNKLG MAC+PAP+QVTWIG
Sbjct: 181 KVLKKGGLWRDIYGIDEKRVASLVREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIG 240
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG 356
YPNTTGLPTIDYRI+DSL DPP TKQKHVEEL+RLPE FLCYTPSPEAGPVCPTPA++NG
Sbjct: 241 YPNTTGLPTIDYRISDSLTDPPMTKQKHVEELVRLPESFLCYTPSPEAGPVCPTPAISNG 300
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
F+TFGSFNNLAKITPKVLQVWARILC+VPNSRLVVKCKPFCC+++R +FL+TLE+LGLES
Sbjct: 301 FVTFGSFNNLAKITPKVLQVWARILCSVPNSRLVVKCKPFCCENIRQKFLATLEELGLES 360
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
LRVDLLPLI LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG+VHAHNVG
Sbjct: 361 LRVDLLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGAVHAHNVG 420
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
VSLL+KVGL L+AK EDEYV LAL LASDV AL LRM+LR+LM KSPVC+G+ F GL
Sbjct: 421 VSLLSKVGLGRLVAKTEDEYVSLALDLASDVNALQELRMTLRELMMKSPVCEGERFTRGL 480
Query: 537 ESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEEP--SKFSEPTKIIFAKEGSPG------ 588
E+ Y +MW RYC GDVPSL+R+ +L++ V+ P K SE + A+ S
Sbjct: 481 EAAYMDMWRRYCDGDVPSLRRLALLEEHPVANGPDSDKTSEKLADLKAQRASATVEEDNQ 540
Query: 589 -SVMPNGFNQASPSMLNLSNIEENG 612
M NG SPS + E NG
Sbjct: 541 PPAMANGVR--SPSSPAAAKCESNG 563
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV Y K D A E A H NP AEA NNLGV+Y+D ++ A+ Y+ L I
Sbjct: 15 NLGVVYTVQGKMDSAASMIEKAIHANPTYAEAYNNLGVLYRDAGSITLAIHAYERCLQID 74
Query: 63 PNFSQSLNN--LGVVYTVQGKMDAAAE 87
P+ + N L + Y +G D E
Sbjct: 75 PDSRNAGQNRLLAMNYIDEGSDDKLYE 101
>gi|42572381|ref|NP_974286.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Arabidopsis
thaliana]
gi|332641540|gb|AEE75061.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Arabidopsis
thaliana]
Length = 732
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/561 (76%), Positives = 486/561 (86%), Gaps = 9/561 (1%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
+LG K N + ++ Y AL I P+++ + NLGVVY+ + D A EKA
Sbjct: 156 TDLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAALE 215
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
P YAEAY N+ DAG+I++AIDAYE+CLKIDPDSRNAGQNRLLAMNYINEG DDKL
Sbjct: 216 RPMYAEAYCNM-----DAGNITMAIDAYEECLKIDPDSRNAGQNRLLAMNYINEGLDDKL 270
Query: 156 FEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQN 215
FEAHRDWG RF RL+ QYTSWDN KDPERP+ IGY+SPD+FTHSVSYFIEAPL +HDY
Sbjct: 271 FEAHRDWGWRFTRLHPQYTSWDNLKDPERPITIGYISPDFFTHSVSYFIEAPLTHHDYTK 330
Query: 216 YKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT 275
YKVVVYSAVVKADAKT RFR+KV+KKGG+W+DIYGIDEKK+A+MVREDKIDILVELTGHT
Sbjct: 331 YKVVVYSAVVKADAKTYRFRDKVLKKGGVWKDIYGIDEKKIASMVREDKIDILVELTGHT 390
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
ANNKLG MAC+PAPVQVTWIGYPNTTGLPT+DYRITDSLADPP+TKQK VEEL+RLP+CF
Sbjct: 391 ANNKLGTMACRPAPVQVTWIGYPNTTGLPTVDYRITDSLADPPDTKQKQVEELVRLPDCF 450
Query: 336 LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 395
LCYTPSPEAGPVCPTPAL+NGF+TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP
Sbjct: 451 LCYTPSPEAGPVCPTPALSNGFVTFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 510
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCE 455
FCCDS+R RFL+TLEQLGLES RVDLLPLIL NHDHMQAYSLMDISLDTFPYAGTTTTCE
Sbjct: 511 FCCDSIRQRFLTTLEQLGLESKRVDLLPLILFNHDHMQAYSLMDISLDTFPYAGTTTTCE 570
Query: 456 SLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRM 515
SLYMGVPCVTMAGSVHAHNVGVSLLTKVGL HL+AKNEDEYVQL++ LASDVTAL+ LRM
Sbjct: 571 SLYMGVPCVTMAGSVHAHNVGVSLLTKVGLGHLVAKNEDEYVQLSVDLASDVTALSKLRM 630
Query: 516 SLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEEP--SKF 573
SLRDLM+ SPVC+G +FA+GLES YRNMW +YCKG+VPSL+RMEMLQ++ V ++P SK
Sbjct: 631 SLRDLMAGSPVCNGPSFAVGLESAYRNMWKKYCKGEVPSLRRMEMLQKE-VHDDPLISKD 689
Query: 574 SEPTKIIFAKEGSPGSVMPNG 594
P+++ E +P S+ NG
Sbjct: 690 LGPSRVSVTGEATP-SLKANG 709
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ YE A P AEA N+ D N+ A++ Y+ L I
Sbjct: 190 YNLGVVYSEMMQYDNALSCYEKAALERPMYAEAYCNM-----DAGNITMAIDAYEECLKI 244
Query: 62 KPNFSQSLNN--LGVVYTVQGKMDAAAE 87
P+ + N L + Y +G D E
Sbjct: 245 DPDSRNAGQNRLLAMNYINEGLDDKLFE 272
>gi|159472004|ref|XP_001694146.1| O-linked N-acetylglucosamine transferase [Chlamydomonas
reinhardtii]
gi|158277313|gb|EDP03082.1| O-linked N-acetylglucosamine transferase [Chlamydomonas
reinhardtii]
Length = 837
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/560 (58%), Positives = 406/560 (72%), Gaps = 16/560 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+YNLGVAYGE A YE+A FNP CAEA NNLGVI+K+RDN+DKAVECY AL+
Sbjct: 282 LYNLGVAYGEKGDLQRAAFMYEMALAFNPACAEAHNNLGVIWKERDNVDKAVECYSAALA 341
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I+P+F QSLNNLGVV T QG+ A ++ A+AA+P Y EA+NNLGVL RD G I A+
Sbjct: 342 IRPHFPQSLNNLGVVLTAQGRAAEALALLSAAVAASPAYTEAHNNLGVLQRDVGCIPEAL 401
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF-EAHRDWGKRFMR-------LYSQ 172
+Y +CL++DP RNAGQNRLLA+NYI G + +L AHR+WG+RF L
Sbjct: 402 ASYSRCLELDPRCRNAGQNRLLALNYIYPGEESELVCSAHREWGERFQADISPLPPLPPG 461
Query: 173 YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHD-YQNYKVVVYSAVVKADAKT 231
SWD PERPL +GY+SPD FTHSVSYF EAPL +H + + +VYS V K DAKT
Sbjct: 462 AHSWD----PERPLRVGYISPDLFTHSVSYFAEAPLSHHSPARGFTHIVYSCVPKPDAKT 517
Query: 232 IRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQ 291
+R R GG+WR++ G+ E ++AA VR D +D+L+ELTGHTANN+LG++A +PAP+Q
Sbjct: 518 LRLRAATEAAGGVWREVAGLSEAELAAAVRADGVDLLLELTGHTANNRLGVLARRPAPLQ 577
Query: 292 VTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP 351
TWIGYPN+TGL +DYR+TD++ DP +T+Q VEEL+RLP CFLCYTP+ +A PV P P
Sbjct: 578 ATWIGYPNSTGLAAVDYRLTDAVCDPYDTQQTFVEELVRLPGCFLCYTPAADAPPVAPPP 637
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
L NG+ITFGSFNNLAKITP+VL+VWA IL AVP SRLV+K KPF C++ R L L
Sbjct: 638 CLHNGYITFGSFNNLAKITPQVLRVWAAILAAVPRSRLVLKNKPFACEAARSHLLRQLAA 697
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
LG+E RVDLLPL N H+ Y+LMDISLD FPYAGTTTT ESLYMGVP +T+AG H
Sbjct: 698 LGVEGWRVDLLPLAPGNSQHLSQYALMDISLDPFPYAGTTTTTESLYMGVPTLTLAGRCH 757
Query: 472 AHNVGVSLLTKVGLKHL---IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
AHNVGVSLLT VGL L +A++E+EYV+LA A++ ALA+LR LR M SP+CD
Sbjct: 758 AHNVGVSLLTAVGLHPLPPWVARSEEEYVELAAAHAANFQALADLRAGLRGRMLASPMCD 817
Query: 529 GQNFALGLESTYRNMWHRYC 548
+F L LE YR +W R+C
Sbjct: 818 APSFILRLEGVYRGLWRRHC 837
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 41/172 (23%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDR--------------- 45
+YNLGV GE+ + D A+ +Y A P A+A NLGV+ ++R
Sbjct: 173 LYNLGVVAGELRQADAAVEYYRAAIAAEPRYAQAHCNLGVLLRERGRLPEAVAAYEAALA 232
Query: 46 --------------------------DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
L + + Y+ ALS P + +L NLGV Y +
Sbjct: 233 AAPNFTIVRNNLAIALTDLGTHVKNEGRLQEGIALYERALSYAPRHADALYNLGVAYGEK 292
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G + AA M E A+A NP AEA+NNLGV++++ ++ A++ Y L I P
Sbjct: 293 GDLQRAAFMYEMALAFNPACAEAHNNLGVIWKERDNVDKAVECYSAALAIRP 344
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD----------RDNLDKAVE 53
LG Y A+ Y+ A P L V+ D R + +AV
Sbjct: 98 LGALYQAQGLLGEAVAAYQRAHELRPADGAIREGLAVVLTDQGTKLKNAGGRAPVSEAVS 157
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
YQ A ++ P ++ +L NLGVV + DAA E AIAA P YA+A+ NLGVL R+
Sbjct: 158 RYQAAAALCPCYAPALYNLGVVAGELRQADAAVEYYRAAIAAEPRYAQAHCNLGVLLRER 217
Query: 114 GSI 116
G +
Sbjct: 218 GRL 220
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 41/164 (25%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVV- 75
A+ Y+ A P A A NLGV+ + D AVE Y+ A++ +P ++Q+ NLGV+
Sbjct: 155 AVSRYQAAAALCPCYAPALYNLGVVAGELRQADAAVEYYRAAIAAEPRYAQAHCNLGVLL 214
Query: 76 ----------------------YTV------------------QGKMDAAAEMIEKAIAA 95
+T+ +G++ + E+A++
Sbjct: 215 RERGRLPEAVAAYEAALAAAPNFTIVRNNLAIALTDLGTHVKNEGRLQEGIALYERALSY 274
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
P +A+A NLGV Y + G + A YE L +P A N
Sbjct: 275 APRHADALYNLGVAYGEKGDLQRAAFMYEMALAFNPACAEAHNN 318
>gi|384253147|gb|EIE26622.1| O-linked N-acetylglucosamine transferase [Coccomyxa subellipsoidea
C-169]
Length = 937
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/549 (57%), Positives = 394/549 (71%), Gaps = 7/549 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+YNLGVA GE + AI YELA HFNP CAEA NNLGV+ +D N ++A CYQ AL
Sbjct: 345 LYNLGVACGETGQVARAIFLYELAVHFNPSCAEAWNNLGVLQRDMGNFERAFSCYQAALQ 404
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PNF Q LNNL V++T QG+ A +M++ AIAA P YAEAYNNLGVL R+ G+I A+
Sbjct: 405 LRPNFPQGLNNLAVIFTAQGRAQDALQMLQAAIAAAPDYAEAYNNLGVLQREVGAIKEAL 464
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+Y +CL++ P SRNAGQNRLLA+NYI E AH +WG+ F + + +
Sbjct: 465 ASYSKCLELAPSSRNAGQNRLLALNYICE----DTAAAHEEWGRDFQAQFQPLAPDFDAR 520
Query: 181 --DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
D ERPLV+GYVSPD FTHSVSYF EAPL +H + +VYS V + DAKT+R R V
Sbjct: 521 FSDLERPLVVGYVSPDLFTHSVSYFAEAPLSHHKQSRVRHIVYSCVPRGDAKTMRLRAAV 580
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
GG WR++ + E +A +VR D +DILV+LTGHTANN+LG A +PAP+QVTW+GYP
Sbjct: 581 EGAGGAWREVASLSELDLARLVRADAVDILVDLTGHTANNRLGAFAMRPAPLQVTWVGYP 640
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
N+TGLP +D+R+TD++ADP +T+Q+ VEEL+RLP CFLCYTP+ +A PV P PA GF+
Sbjct: 641 NSTGLPAVDFRLTDAVADPLDTRQRFVEELVRLPGCFLCYTPAIDAPPVLPAPAAAAGFV 700
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGSFNNLAKITP+V+ WARIL A+P+SRLV+K KPF C S R L L+ G+++ R
Sbjct: 701 TFGSFNNLAKITPRVMAAWARILTALPSSRLVLKNKPFACASARSHVLGQLQAAGVDASR 760
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
VDLLPL N DH+ Y+LMDISLD FPYAGTTTTCESLYMGVP +T+AG HAHNVG S
Sbjct: 761 VDLLPLAAANSDHLATYALMDISLDPFPYAGTTTTCESLYMGVPVITLAGGCHAHNVGAS 820
Query: 479 LLTKVGLKH-LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
LL +G++ +A +EDEYV+LA+ A+DV LA LRM+LR M S +CD F LE
Sbjct: 821 LLDAMGMREGWVAHSEDEYVRLAVAAAADVPKLAALRMNLRQQMLASRLCDAPTFVRQLE 880
Query: 538 STYRNMWHR 546
TYR +W R
Sbjct: 881 DTYRQLWLR 889
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YN+GV + E +F A Y A NP AEA NLGVI+K+ L++A+ Y+ AL+
Sbjct: 236 FYNIGVIHSERREFSAAKELYARAIAANPGYAEAHCNLGVIHKEEGRLEEAIAAYERALA 295
Query: 61 IKPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
I P F+ NNL + T V G M + E+A+ N +A+A NLGV +
Sbjct: 296 IAPEFAIVSNNLAIALTEMGTRVKVAGDMAGGIALYERALTFNAKHADALYNLGVACGET 355
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQN 139
G ++ AI YE + +P A N
Sbjct: 356 GQVARAIFLYELAVHFNPSCAEAWNN 381
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
+LG K ++ Y+ A SI ++ + N+GV+++ + + AA E+ +AIAA
Sbjct: 203 TDLGTKLKVSGRPEEGFAKYRQAASICAAYAPAFYNIGVIHSERREFSAAKELYARAIAA 262
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
NP YAEA+ NLGV++++ G + AI AYE+ L I P+
Sbjct: 263 NPGYAEAHCNLGVIHKEEGRLEEAIAAYERALAIAPE 299
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A A N+GVI+ +R A E Y A++ P ++++ NLGV++ +G+++ A E+
Sbjct: 233 APAFYNIGVIHSERREFSAAKELYARAIAANPGYAEAHCNLGVIHKEEGRLEEAIAAYER 292
Query: 92 AIAANPTYAEAYNNL-------GVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
A+A P +A NNL G + AG ++ I YE+ L + +A
Sbjct: 293 ALAIAPEFAIVSNNLAIALTEMGTRVKVAGDMAGGIALYERALTFNAKHADA 344
>gi|255072419|ref|XP_002499884.1| glycosyltransferase family 41 protein [Micromonas sp. RCC299]
gi|226515146|gb|ACO61142.1| glycosyltransferase family 41 protein [Micromonas sp. RCC299]
Length = 864
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 295/554 (53%), Positives = 383/554 (69%), Gaps = 3/554 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVA E+ + D A + YE PHCAEA NNLGV++++R+N+++AVECY+ A++
Sbjct: 269 MYNLGVAQAEIGELDRATIAYESTLRLRPHCAEAWNNLGVLHRERNNVERAVECYRRAVA 328
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P+F+Q LNNLGVVYT+QG+ A E +++A+AA PTYA A+NNLGVL RD G + A+
Sbjct: 329 INPSFAQPLNNLGVVYTMQGQARMALEALQRAVAAAPTYAVAHNNLGVLLRDTGDVPEAL 388
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+AY +C + PD RNA QN LL +NY+ G ++ EAH WG R + S K
Sbjct: 389 EAYGECARHSPDHRNAEQNYLLGLNYVLSGERREVCEAHASWGARSPKSSKSSKSEGANK 448
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
R LV+GYVSPD +THSVSYF APL HD VVVYSA +ADA T +++V
Sbjct: 449 RGRR-LVVGYVSPDMYTHSVSYFAHAPLSAHDPSRVAVVVYSATPRADAMTETLKQRVAA 507
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
G WRD+ + E+++A +R D +DILVELTGHTANN+LG MA +PAPVQVTWIGYPN+
Sbjct: 508 IDGTWRDVQHLTERQLAEAIRADGVDILVELTGHTANNRLGAMALRPAPVQVTWIGYPNS 567
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGL IDYRITD++ DP +T Q E L+RLP CFL YTPS EA V P P LT+G++TF
Sbjct: 568 TGLAEIDYRITDAVCDPHDTTQTFTETLVRLPGCFLSYTPSVEAPAVAPAPCLTSGYVTF 627
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G FN LAK+TP V WARI+ VPNSRL++K KPF C +++ RFL+ + G+ES RVD
Sbjct: 628 GCFNTLAKVTPDVRSRWARIMREVPNSRLLLKAKPFACQTIQQRFLAAMAAEGVESWRVD 687
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L PL H+ Y +DI+LDTFPYAGTTTTCESL+MGVP +T G HA NVG SLL
Sbjct: 688 LFPLTGGTGAHLSVYGTVDIALDTFPYAGTTTTCESLWMGVPVLTARGKCHAQNVGASLL 747
Query: 481 TKV-GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS-PVCDGQNFALGLES 538
+ V GL+ +A +ED+YV+ A++LA D LA +R LR M+ S +CD ++F G+E
Sbjct: 748 SAVGGLEEFVATDEDDYVRRAVRLAGDHARLAAVRSGLRARMASSGGLCDARSFMRGVEE 807
Query: 539 TYRNMWHRYCKGDV 552
Y MW R+C+ +V
Sbjct: 808 RYAEMWRRWCEREV 821
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YNLGV E+ + D A+ Y A NP+ AEA N+GVI K R ++ A+E Y+ L+
Sbjct: 160 FYNLGVVMSELGRHDEALECYARAIEVNPNHAEAHCNVGVIKKYRGDVTGAIEAYERCLA 219
Query: 61 IKPNFSQSLNNLGVVY-------TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
+ PN + NL + G + A E+A+ +P AEA NLGV +
Sbjct: 220 VNPNHALGRGNLSIALGDRATAIKASGDVALAVRTYERALTLDPNSAEAMYNLGVAQAEI 279
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQN 139
G + A AYE L++ P A N
Sbjct: 280 GELDRATIAYESTLRLRPHCAEAWNN 305
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ Y A +P + A NLGV+ + D+A+ECY A+ + PN +++ N+GV+
Sbjct: 142 AVAHYREAAATDPRYSPAFYNLGVVMSELGRHDEALECYARAIEVNPNHAEAHCNVGVIK 201
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQCLKI 129
+G + A E E+ +A NP +A NL + D +G ++LA+ YE+ L +
Sbjct: 202 KYRGDVTGAIEAYERCLAVNPNHALGRGNLSIALGDRATAIKASGDVALAVRTYERALTL 261
Query: 130 DPDSRNAGQNRLLAMNYINE 149
DP+S A N +A I E
Sbjct: 262 DPNSAEAMYNLGVAQAEIGE 281
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A +LG K + +AV Y+ A + P +S + NLGVV + G+ D A E +
Sbjct: 123 AATLTDLGTRVKVLGSPAQAVAHYREAAATDPRYSPAFYNLGVVMSELGRHDEALECYAR 182
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
AI NP +AEA+ N+GV+ + G ++ AI+AYE+CL ++P+
Sbjct: 183 AIEVNPNHAEAHCNVGVIKKYRGDVTGAIEAYERCLAVNPN 223
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN-------FSQSLNNLG 73
Y+ P+ A AC LG +++ L +A + ++ +L P + +L +LG
Sbjct: 71 YDCVIRREPNHALACRALGSLFQTYGMLAEAADAFRRSLRTNPGDAPTRERLAATLTDLG 130
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
V G A +A A +P Y+ A+ NLGV+ + G A++ Y + ++++P+
Sbjct: 131 TRVKVLGSPAQAVAHYREAAATDPRYSPAFYNLGVVMSELGRHDEALECYARAIEVNPNH 190
Query: 134 RNAGQN 139
A N
Sbjct: 191 AEAHCN 196
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 12/161 (7%)
Query: 6 VAYGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
V EML + + A+ + A P +A G+ ++ L A Y +
Sbjct: 18 VRVAEMLQTGGRAEEALAAIDTALTLAPGNLDAVTKRGLCFQALGALHDAYNAYDCVIRR 77
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP-------TYAEAYNNLGVLYRDAG 114
+PN + + LG ++ G + AA+ +++ NP A +LG + G
Sbjct: 78 EPNHALACRALGSLFQTYGMLAEAADAFRRSLRTNPGDAPTRERLAATLTDLGTRVKVLG 137
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
S + A+ Y + DP A N + M+ + HD+ L
Sbjct: 138 SPAQAVAHYREAAATDPRYSPAFYNLGVVMSELGR-HDEAL 177
>gi|308810278|ref|XP_003082448.1| SPINDLY protein (ISS) [Ostreococcus tauri]
gi|116060916|emb|CAL57394.1| SPINDLY protein (ISS) [Ostreococcus tauri]
Length = 946
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/558 (49%), Positives = 367/558 (65%), Gaps = 11/558 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGVA E ++D AI+ YE A PH AE NN GV+YK+R N ++A+E Y A++
Sbjct: 315 YNLGVACAEAEEYDRAIIAYETAGRLRPHYAEVWNNAGVLYKERGNDERAMEYYHRAVAC 374
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PNF+Q LNNLGV++T+ G+ A + +++A+ +P YA A+NN+GVL RD G I A D
Sbjct: 375 NPNFAQPLNNLGVLHTMSGQAQFALDALQRAVTVDPAYAVAHNNIGVLLRDTGDIEHACD 434
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS------QYTS 175
AY +C++ P+ R+A QN LLA+NYI G + ++ EAH WG RF +L +
Sbjct: 435 AYRECVRHSPNDRHAEQNYLLALNYIRRGEEREVCEAHAAWGTRFAKLIGPPLKARRAVR 494
Query: 176 WDNTKDP--ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
D+ R LV+GYVSPD +THSVSYF APL HD + K +VY+ DA+T R
Sbjct: 495 QDSGAGTPGRRKLVVGYVSPDMYTHSVSYFAAAPLRSHDSEMIKPIVYNVAKFRDAQTER 554
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
R+ ++ GG WRD + E ++A +R D +D+LVELTGHTANN+LG M +PAPVQ+T
Sbjct: 555 LRKFTLESGGEWRDCATLTEAELAECIRNDSVDVLVELTGHTANNRLGTMVLEPAPVQIT 614
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE--CFLCYTPSPEA-GPVCPT 350
WIGYPNTTGL +I YRITD + DP TKQ E+L+RLP FLCYTP+PEA V
Sbjct: 615 WIGYPNTTGLRSIRYRITDEVCDPAATKQTFTEQLVRLPSPYAFLCYTPNPEAPSTVSLA 674
Query: 351 PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLE 410
P L+ G++TFG FN +AK+T +V VW+RI+ A P SRL K K F C+ +R RFL+ +
Sbjct: 675 PCLSVGYVTFGCFNTMAKVTAEVRTVWSRIMLATPGSRLYFKSKAFACEVIRQRFLTQMA 734
Query: 411 QLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSV 470
G+ES R+D +PL H+ Y +DI+LDTFPYAGTTTTCESLYMGVP +T++G
Sbjct: 735 ACGIESWRIDCVPLEKATSSHLAMYDRVDIALDTFPYAGTTTTCESLYMGVPVITLSGGC 794
Query: 471 HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQ 530
HAHNVG SLL +GL +A + + YV++A LA D ++ R SLRD + SP+CD
Sbjct: 795 HAHNVGKSLLKTIGLDEFVANDVEAYVRIATSLAKDTKRISKTRSSLRDKLLHSPLCDAN 854
Query: 531 NFALGLESTYRNMWHRYC 548
F LES YR +W R+C
Sbjct: 855 GFTRELESIYRELWQRWC 872
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV+ E + A Y + +P AEA N+GV++K +D+AVE Y+ L +
Sbjct: 206 YNLGVSLVECGQLVEAEHAYRRSIAVDPTRAEAYCNIGVVFKMMSRMDEAVEAYEHCLRL 265
Query: 62 KPNFSQSLNNLGVVYTVQG-------KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
P+F NL +V T QG + AA E+A+ + EAY NLGV +A
Sbjct: 266 APDFELGRKNLSLVLTDQGTEFKMKNSLSAAMATYERALTYDSLNVEAYYNLGVACAEAE 325
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFE 157
AI AYE ++ P N + Y G+D++ E
Sbjct: 326 EYDRAIIAYETAGRLRPHYAEVWNN--AGVLYKERGNDERAME 366
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKP-NFSQSLNNLGVVYTVQGKMDAAAEMIE 90
A A +LG +K ++++A+ Y+ ++ P + + NLGV G++ A
Sbjct: 167 AAAWTDLGTTHKAAGDVERALATYRAVIAELPWCAAAAYYNLGVSLVECGQLVEAEHAYR 226
Query: 91 KAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
++IA +PT AEAY N+GV+++ + A++AYE CL++ PD +N L++ ++G
Sbjct: 227 RSIAVDPTRAEAYCNIGVVFKMMSRMDEAVEAYEHCLRLAPDFELGRKN--LSLVLTDQG 284
Query: 151 HDDKL 155
+ K+
Sbjct: 285 TEFKM 289
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACN-NLGVIYKDRDNLDKAVECYQMALSI 61
+LG + + A+ Y P CA A NLGV + L +A Y+ ++++
Sbjct: 172 DLGTTHKAAGDVERALATYRAVIAELPWCAAAAYYNLGVSLVECGQLVEAEHAYRRSIAV 231
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG------- 114
P +++ N+GVV+ + +MD A E E + P + NL ++ D G
Sbjct: 232 DPTRAEAYCNIGVVFKMMSRMDEAVEAYEHCLRLAPDFELGRKNLSLVLTDQGTEFKMKN 291
Query: 115 SISLAIDAYEQCLKID 130
S+S A+ YE+ L D
Sbjct: 292 SLSAAMATYERALTYD 307
>gi|401408423|ref|XP_003883660.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
gi|325118077|emb|CBZ53628.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
Length = 987
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 281/582 (48%), Positives = 386/582 (66%), Gaps = 41/582 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGVAY + KFD A+V Y+LA FNP CAEA NN+GVI+KDR+N D+A+ CY AL I
Sbjct: 405 YNLGVAYADSHKFDKALVNYQLAVAFNPRCAEAYNNMGVIHKDRENTDQAIVCYNKALEI 464
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+FSQ+LNNLGV+YT GK+ A + ++AI NP+YAEAYNNLGVLYRD G I ++
Sbjct: 465 NPDFSQTLNNLGVLYTCTGKIGEALQFAKRAIEVNPSYAEAYNNLGVLYRDQGDIEDSVK 524
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW----- 176
AY++CL +DP+S NA N+LLA+NY+ + D+++F WG + + + YTSW
Sbjct: 525 AYDKCLVLDPNSPNAFHNKLLALNYLEDLPDNEIFRVSEKWGGQLLSARTPYTSWLCPHI 584
Query: 177 ---------------------------DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLV 209
+ R + +GY+ PD+FTHSVSYFI APLV
Sbjct: 585 SISPAPSSLAPSSLSPSASPSLSSPPLSSASIASRVIRVGYIGPDFFTHSVSYFIHAPLV 644
Query: 210 YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILV 269
YHD + + VY+ V++ D KT F+ WR I G+ E+ VA ++REDKIDILV
Sbjct: 645 YHDKSKFHITVYANVIREDEKTQMFK----ALPHCWRSIVGMHERDVAHLIREDKIDILV 700
Query: 270 ELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELI 329
EL GHTA+N+L +MA +PAP+Q++WIGYPNTTGL TID+RITD++ADP +T Q +VEEL+
Sbjct: 701 ELAGHTAHNRLDVMAWKPAPIQISWIGYPNTTGLKTIDFRITDAVADPADTTQLYVEELV 760
Query: 330 RLPECFLCYTPSPEAG---PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
RLP CF+CY P P+ P P P + +G ITFGSFNNLAK+ +V+++W+RIL AVP
Sbjct: 761 RLPNCFICYHPPPDFPKDVPAKPPPVVEHGVITFGSFNNLAKLGKQVIELWSRILKAVPT 820
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
SRL++K +PF + ++ +F + E G+ R+D + L+ DH+ YSL+DI+LD+FP
Sbjct: 821 SRLLLKARPFANEEMQRKFKAKFEAHGVSGDRIDAMALVPACMDHLMVYSLVDIALDSFP 880
Query: 447 YAGTTTTCESLYMGVPCVTM-AGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
YAGTTTTCE+L MGVP V++ ++HAHNVG +LL GL L+A ++YV+LA++LA
Sbjct: 881 YAGTTTTCEALVMGVPVVSLRRKNIHAHNVGATLLAHYGLPELVADTPEQYVRLAVELAG 940
Query: 506 DVTALANLRMSLR-DLMSKSPVCDGQNFALGLESTYRNMWHR 546
DV L R S+R ++ K+ + F+ LE YR + R
Sbjct: 941 DVERLKQYRQSIRAAVLEKASQPHAERFSRDLEELYRQLIAR 982
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPH-------CAEACNNLGVIYKDRDNLDKAVECY 55
N+G + K + AI FYE A NP+ A A +LG K + KA+ Y
Sbjct: 331 NMGAVCKNLGKLEDAIAFYEKALACNPNYQLSLSNMAVALTDLGTQQKTFEGAKKAISLY 390
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+ AL P +S + NLGV Y K D A + A+A NP AEAYNN+GV+++D +
Sbjct: 391 KKALIYNPYYSDAYYNLGVAYADSHKFDKALVNYQLAVAFNPRCAEAYNNMGVIHKDREN 450
Query: 116 ISLAIDAYEQCLKIDPD 132
AI Y + L+I+PD
Sbjct: 451 TDQAIVCYNKALEINPD 467
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 13/177 (7%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPH-------CAEACNNLGVIYKDRDNLDKAVECY 55
N+GVA E + A+ Y + NPH A A +LG K L A+ CY
Sbjct: 222 NIGVALKERGELLQAVEHYRASLAANPHQPTCRMNLAVALTDLGTKLKQEKKLQAALVCY 281
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
AL+ P ++ NLGV++ A +M +A+ NP Y EAYNN+G + ++ G
Sbjct: 282 TEALTADPTYAPCYYNLGVIHAETDDPHTALQMYREAVRINPRYVEAYNNMGAVCKNLGK 341
Query: 116 ISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ 172
+ AI YE+ L +P+ + + N +A+ + G K FE K+ + LY +
Sbjct: 342 LEDAIAFYEKALACNPNYQLSLSNMAVALTDL--GTQQKTFEG----AKKAISLYKK 392
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV + E A+ Y A NP EA NN+G + K+ L+ A+ Y+ AL+
Sbjct: 296 YNLGVIHAETDDPHTALQMYREAVRINPRYVEAYNNMGAVCKNLGKLEDAIAFYEKALAC 355
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA-------NPTYAEAYNNLGVLYRDAG 114
PN+ SL+N+ V T G E +KAI+ NP Y++AY NLGV Y D+
Sbjct: 356 NPNYQLSLSNMAVALTDLGTQQKTFEGAKKAISLYKKALIYNPYYSDAYYNLGVAYADSH 415
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQN 139
A+ Y+ + +P A N
Sbjct: 416 KFDKALVNYQLAVAFNPRCAEAYNN 440
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP- 63
GVA + + A+ A +P A NN+GV K+R L +AVE Y+ +L+ P
Sbjct: 190 GVALRALGRVHEALECCREALRLDPRNTNALNNIGVALKERGELLQAVEHYRASLAANPH 249
Query: 64 ------NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
N + +L +LG + K+ AA +A+ A+PTYA Y NLGV++ +
Sbjct: 250 QPTCRMNLAVALTDLGTKLKQEKKLQAALVCYTEALTADPTYAPCYYNLGVIHAETDDPH 309
Query: 118 LAIDAYEQCLKIDP 131
A+ Y + ++I+P
Sbjct: 310 TALQMYREAVRINP 323
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A++ Y A N GV + + +A+EC + AL + P + +LNN+GV
Sbjct: 168 ALLLYNAGLKVYADDANLWNCKGVALRALGRVHEALECCREALRLDPRNTNALNNIGVAL 227
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS-------ISLAIDAYEQCLKI 129
+G++ A E ++AANP NL V D G+ + A+ Y + L
Sbjct: 228 KERGELLQAVEHYRASLAANPHQPTCRMNLAVALTDLGTKLKQEKKLQAALVCYTEALTA 287
Query: 130 DP 131
DP
Sbjct: 288 DP 289
>gi|221488412|gb|EEE26626.1| signal transduction protein, putative [Toxoplasma gondii GT1]
Length = 978
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 283/584 (48%), Positives = 385/584 (65%), Gaps = 43/584 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGVAY ++ KFD A+V Y+LA FNP CAEA NN+GVI+KDR+N D+A Y AL I
Sbjct: 394 YNLGVAYADLHKFDKALVNYQLAVAFNPRCAEAYNNMGVIHKDRENTDQATVYYNKALEI 453
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+FSQ+LNNLGV+YT GK+ A ++AI NP YAEAYNNLGVLYRD G I ++
Sbjct: 454 NPDFSQTLNNLGVLYTCTGKIGEALHFAKRAIEVNPNYAEAYNNLGVLYRDQGDIEDSVK 513
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW----- 176
AY++CL +DP+S NA N+LLA+NY+ ++++ WG F+ S YTSW
Sbjct: 514 AYDKCLLLDPNSPNAFHNKLLALNYLENLPENEICRVSEKWGLHFLSSRSPYTSWLCPPV 573
Query: 177 ----------------------------DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
R + +GY+ PD+FTHSVSYFI APL
Sbjct: 574 TISPALPSSAVRSPARPSSSSASSSPASPGDSSASRVIRVGYIGPDFFTHSVSYFIHAPL 633
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR-EDKIDI 267
VYHD + + VY+ V++ D KT F+ + WR I G++E++VA ++R ED+IDI
Sbjct: 634 VYHDKAKFHITVYANVIREDEKTQMFKTLPHR----WRSIVGLNEQEVARIIREEDRIDI 689
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
LVEL GHTA+N+L +MAC+PAPVQ++WIGYPNTTGL TID+RITD++ADP T +++VEE
Sbjct: 690 LVELAGHTAHNRLDVMACKPAPVQISWIGYPNTTGLKTIDFRITDAVADPLTTTERYVEE 749
Query: 328 LIRLPECFLCYTPSPEAG---PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAV 384
L+R+P CFLCY P P+ P P P L +G +TFGSFNNLAK+ +V+++W+RIL AV
Sbjct: 750 LVRMPNCFLCYQPPPDFPKHVPAKPPPVLDHGVVTFGSFNNLAKLGNQVIEIWSRILNAV 809
Query: 385 PNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
PNSRL+VK +PF ++ +F + E G+ R+D + LI DH+ YSL+DI+LD+
Sbjct: 810 PNSRLLVKARPFANKEMQRKFKAKFEAHGISGDRIDAMALIPACMDHLMVYSLVDIALDS 869
Query: 445 FPYAGTTTTCESLYMGVPCVTMAG-SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
FPYAGTTTTCE+L MGVP V++ ++HAHNVG +LL GL LIA + ++YV++A++L
Sbjct: 870 FPYAGTTTTCEALVMGVPVVSLRRPNIHAHNVGATLLVNYGLPELIADDPEQYVRVAVEL 929
Query: 504 ASDVTALANLRMSLRD-LMSKSPVCDGQNFALGLESTYRNMWHR 546
A DV L R S+R+ ++ K+ + F LE YR + R
Sbjct: 930 AGDVERLKRYRQSIRESVLEKASEPHAKQFTRDLEELYRQLLAR 973
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV + E A+ Y A NP EA NN+G + K+ L+ A+ Y+ AL+
Sbjct: 285 YNLGVIHAETDDPHTALQMYREATRLNPSYVEAYNNMGAVCKNLGKLEDAISFYEKALAC 344
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA-------NPTYAEAYNNLGVLYRDAG 114
N+ SL+N+ V T G A+E +KAI+ NP Y++AY NLGV Y D
Sbjct: 345 NANYQMSLSNMAVALTDLGTQQKASEGAKKAISLYKKALIYNPYYSDAYYNLGVAYADLH 404
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQN 139
A+ Y+ + +P A N
Sbjct: 405 KFDKALVNYQLAVAFNPRCAEAYNN 429
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPH-------CAEACNNLGVIYKDRDNLDKAVECY 55
N+G + K + AI FYE A N + A A +LG K + KA+ Y
Sbjct: 320 NMGAVCKNLGKLEDAISFYEKALACNANYQMSLSNMAVALTDLGTQQKASEGAKKAISLY 379
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+ AL P +S + NLGV Y K D A + A+A NP AEAYNN+GV+++D +
Sbjct: 380 KKALIYNPYYSDAYYNLGVAYADLHKFDKALVNYQLAVAFNPRCAEAYNNMGVIHKDREN 439
Query: 116 ISLAIDAYEQCLKIDPD 132
A Y + L+I+PD
Sbjct: 440 TDQATVYYNKALEINPD 456
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPH-------CAEACNNLGVIYKDRDNLDKAVE 53
+ N+GVA E + A+ Y + NPH A A +LG K L A+
Sbjct: 209 LNNIGVALKERGELLQAVEHYRASLVANPHQPTCRTNLAVALTDLGTKLKQEKKLQAALV 268
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
CY AL+ P ++ NLGV++ A +M +A NP+Y EAYNN+G + ++
Sbjct: 269 CYTEALTADPTYAPCYYNLGVIHAETDDPHTALQMYREATRLNPSYVEAYNNMGAVCKNL 328
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
G + AI YE+ L + + + + N +A+
Sbjct: 329 GKLEDAISFYEKALACNANYQMSLSNMAVAL 359
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG + K A+V Y A +P A NLGVI+ + D+ A++ Y+ A
Sbjct: 250 LTDLGTKLKQEKKLQAALVCYTEALTADPTYAPCYYNLGVIHAETDDPHTALQMYREATR 309
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P++ ++ NN+G V GK++ A EKA+A N Y + +N+ V D G+ A
Sbjct: 310 LNPSYVEAYNNMGAVCKNLGKLEDAISFYEKALACNANYQMSLSNMAVALTDLGTQQKAS 369
Query: 121 DAYEQCLKI 129
+ ++ + +
Sbjct: 370 EGAKKAISL 378
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP- 63
GV + + A+ A +P A NN+GV K+R L +AVE Y+ +L P
Sbjct: 179 GVTLRALGRLQEALDCCREALRLDPGNTNALNNIGVALKERGELLQAVEHYRASLVANPH 238
Query: 64 ------NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
N + +L +LG + K+ AA +A+ A+PTYA Y NLGV++ +
Sbjct: 239 QPTCRTNLAVALTDLGTKLKQEKKLQAALVCYTEALTADPTYAPCYYNLGVIHAETDDPH 298
Query: 118 LAIDAYEQCLKIDPDSRNAGQN 139
A+ Y + +++P A N
Sbjct: 299 TALQMYREATRLNPSYVEAYNN 320
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A+ N GV + L +A++C + AL + P + +LNN+GV +G++ A E
Sbjct: 172 ADLWNCKGVTLRALGRLQEALDCCREALRLDPGNTNALNNIGVALKERGELLQAVEHYRA 231
Query: 92 AIAANPTYAEAYNNLGVLYRDAGS-------ISLAIDAYEQCLKIDP 131
++ ANP NL V D G+ + A+ Y + L DP
Sbjct: 232 SLVANPHQPTCRTNLAVALTDLGTKLKQEKKLQAALVCYTEALTADP 278
>gi|237833307|ref|XP_002365951.1| signal transduction protein, putative [Toxoplasma gondii ME49]
gi|211963615|gb|EEA98810.1| signal transduction protein, putative [Toxoplasma gondii ME49]
gi|221508918|gb|EEE34487.1| signal transduction protein, putative [Toxoplasma gondii VEG]
Length = 978
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 283/584 (48%), Positives = 385/584 (65%), Gaps = 43/584 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGVAY ++ KFD A+V Y+LA FNP CAEA NN+GVI+KDR+N D+A Y AL I
Sbjct: 394 YNLGVAYADLHKFDKALVNYQLAVAFNPRCAEAYNNMGVIHKDRENTDQATVYYNKALEI 453
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+FSQ+LNNLGV+YT GK+ A ++AI NP YAEAYNNLGVLYRD G I ++
Sbjct: 454 NPDFSQTLNNLGVLYTCTGKIGEALHFAKRAIEVNPNYAEAYNNLGVLYRDQGDIEDSVK 513
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW----- 176
AY++CL +DP+S NA N+LLA+NY+ ++++ WG F+ S YTSW
Sbjct: 514 AYDKCLLLDPNSPNAFHNKLLALNYLENLPENEICRVSEKWGLHFLSSRSPYTSWLCPPV 573
Query: 177 ----------------------------DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
R + +GY+ PD+FTHSVSYFI APL
Sbjct: 574 TISPALPSSAVRSPARPSSSSASSSLASPGDSSASRVIRVGYIGPDFFTHSVSYFIHAPL 633
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR-EDKIDI 267
VYHD + + VY+ V++ D KT F+ + WR I G++E++VA ++R ED+IDI
Sbjct: 634 VYHDKAKFHITVYANVIREDEKTQMFKTLPHR----WRSIVGLNEQEVARIIREEDRIDI 689
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
LVEL GHTA+N+L +MAC+PAPVQ++WIGYPNTTGL TID+RITD++ADP T +++VEE
Sbjct: 690 LVELAGHTAHNRLDVMACKPAPVQISWIGYPNTTGLKTIDFRITDAVADPLTTTERYVEE 749
Query: 328 LIRLPECFLCYTPSPEAG---PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAV 384
L+R+P CFLCY P P+ P P P L +G +TFGSFNNLAK+ +V+++W+RIL AV
Sbjct: 750 LVRMPNCFLCYQPPPDFPKHVPAKPPPVLDHGVVTFGSFNNLAKLGNQVIEIWSRILNAV 809
Query: 385 PNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
PNSRL+VK +PF ++ +F + E G+ R+D + LI DH+ YSL+DI+LD+
Sbjct: 810 PNSRLLVKARPFANKEMQRKFKAKFEAHGISGDRIDAMALIPACMDHLMVYSLVDIALDS 869
Query: 445 FPYAGTTTTCESLYMGVPCVTMAG-SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
FPYAGTTTTCE+L MGVP V++ ++HAHNVG +LL GL LIA + ++YV++A++L
Sbjct: 870 FPYAGTTTTCEALVMGVPVVSLRRPNIHAHNVGATLLVNYGLPELIADDPEQYVRVAVEL 929
Query: 504 ASDVTALANLRMSLRD-LMSKSPVCDGQNFALGLESTYRNMWHR 546
A DV L R S+R+ ++ K+ + F LE YR + R
Sbjct: 930 AGDVERLKRYRQSIRESVLEKASEPHAKQFTRDLEELYRQLLAR 973
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV + E A+ Y A NP EA NN+G + K+ L+ A+ Y+ AL+
Sbjct: 285 YNLGVIHAETDDPHTALQMYREATRLNPSYVEAYNNMGAVCKNLGKLEDAISFYEKALAC 344
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA-------NPTYAEAYNNLGVLYRDAG 114
N+ SL+N+ V T G A+E +KAI+ NP Y++AY NLGV Y D
Sbjct: 345 NANYQMSLSNMAVALTDLGTQQKASEGAKKAISLYKKALIYNPYYSDAYYNLGVAYADLH 404
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQN 139
A+ Y+ + +P A N
Sbjct: 405 KFDKALVNYQLAVAFNPRCAEAYNN 429
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPH-------CAEACNNLGVIYKDRDNLDKAVECY 55
N+G + K + AI FYE A N + A A +LG K + KA+ Y
Sbjct: 320 NMGAVCKNLGKLEDAISFYEKALACNANYQMSLSNMAVALTDLGTQQKASEGAKKAISLY 379
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+ AL P +S + NLGV Y K D A + A+A NP AEAYNN+GV+++D +
Sbjct: 380 KKALIYNPYYSDAYYNLGVAYADLHKFDKALVNYQLAVAFNPRCAEAYNNMGVIHKDREN 439
Query: 116 ISLAIDAYEQCLKIDPD 132
A Y + L+I+PD
Sbjct: 440 TDQATVYYNKALEINPD 456
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPH-------CAEACNNLGVIYKDRDNLDKAVE 53
+ N+GVA E + A+ Y + NPH A A +LG K L A+
Sbjct: 209 LNNIGVALKERGELLQAVEHYRASLVANPHQPTCRTNLAVALTDLGTKLKQEKKLQAALV 268
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
CY AL+ P ++ NLGV++ A +M +A NP+Y EAYNN+G + ++
Sbjct: 269 CYTEALTADPTYAPCYYNLGVIHAETDDPHTALQMYREATRLNPSYVEAYNNMGAVCKNL 328
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
G + AI YE+ L + + + + N +A+
Sbjct: 329 GKLEDAISFYEKALACNANYQMSLSNMAVAL 359
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP- 63
GV + + A+ A +P A NN+GV K+R L +AVE Y+ +L P
Sbjct: 179 GVTLRALGRLQEALDCCREALRLDPRNTNALNNIGVALKERGELLQAVEHYRASLVANPH 238
Query: 64 ------NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
N + +L +LG + K+ AA +A+ A+PTYA Y NLGV++ +
Sbjct: 239 QPTCRTNLAVALTDLGTKLKQEKKLQAALVCYTEALTADPTYAPCYYNLGVIHAETDDPH 298
Query: 118 LAIDAYEQCLKIDPDSRNAGQN 139
A+ Y + +++P A N
Sbjct: 299 TALQMYREATRLNPSYVEAYNN 320
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG + K A+V Y A +P A NLGVI+ + D+ A++ Y+ A
Sbjct: 250 LTDLGTKLKQEKKLQAALVCYTEALTADPTYAPCYYNLGVIHAETDDPHTALQMYREATR 309
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P++ ++ NN+G V GK++ A EKA+A N Y + +N+ V D G+ A
Sbjct: 310 LNPSYVEAYNNMGAVCKNLGKLEDAISFYEKALACNANYQMSLSNMAVALTDLGTQQKAS 369
Query: 121 DAYEQCLKI 129
+ ++ + +
Sbjct: 370 EGAKKAISL 378
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A+ N GV + L +A++C + AL + P + +LNN+GV +G++ A E
Sbjct: 172 ADLWNCKGVTLRALGRLQEALDCCREALRLDPRNTNALNNIGVALKERGELLQAVEHYRA 231
Query: 92 AIAANPTYAEAYNNLGVLYRDAGS-------ISLAIDAYEQCLKIDP 131
++ ANP NL V D G+ + A+ Y + L DP
Sbjct: 232 SLVANPHQPTCRTNLAVALTDLGTKLKQEKKLQAALVCYTEALTADP 278
>gi|145352766|ref|XP_001420708.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580943|gb|ABO99001.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 708
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 271/558 (48%), Positives = 374/558 (67%), Gaps = 11/558 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGVA E ++D AI+ YE A P CAE NN GV+YK+R N +A++ Y+ A++
Sbjct: 150 YNLGVACAEAEEYDRAIIAYENAGRLRPQCAEIWNNAGVLYKERGNDARAMDYYRRAVAC 209
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PNF+Q LNNLGV++T+ G+ A E +++A+ +P+YA A+NNLGVL RD G I A +
Sbjct: 210 NPNFAQPLNNLGVLHTMTGEAQQALETLQRAVTVDPSYAVAHNNLGVLLRDTGDIEHACE 269
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS-------QYT 174
+Y +C++ P+ R+A QN LLA+NY+ +G + + EAH WG RF++L
Sbjct: 270 SYRECIRNSPNDRHAEQNYLLALNYVRQGEEPDVCEAHATWGTRFVKLAGPPLKARRAVR 329
Query: 175 SWDNTKDP-ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
S P R LV+GYVSPD +THSVSYF AP HD ++ K+VVY+ DA+T R
Sbjct: 330 SDSGAGTPGRRKLVVGYVSPDMYTHSVSYFAAAPFRSHDKESVKLVVYNVSKFCDAQTER 389
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
R+ ++ GG WRD +DE+++A +R D +D+LVELTGHTANN+LG +A +PAPVQ+T
Sbjct: 390 LRKFTLESGGEWRDCASLDERELAECIRGDCVDVLVELTGHTANNRLGTLALEPAPVQIT 449
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE--CFLCYTPSPEA-GPVCPT 350
WIGYPN+TG+ +I YRITD + DP +TKQ E+L+R+P FLCYTP+PEA V
Sbjct: 450 WIGYPNSTGMRSIHYRITDKVCDPLDTKQTFTEQLVRIPSPHSFLCYTPNPEAPQQVSDA 509
Query: 351 PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLE 410
P + GF+TFG FN +AK+T V W++IL A P SRL K K F C+ +R RFLS +
Sbjct: 510 PCASQGFVTFGCFNTMAKVTADVRVAWSQILLATPGSRLYFKSKAFACEVIRQRFLSQMS 569
Query: 411 QLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSV 470
LG+++ R+D +PL H+ Y +DI+LDTFPYAGTTTTCESL+MGVP +T+AG+
Sbjct: 570 ALGVDNWRIDCVPLERETSSHLAMYDRVDIALDTFPYAGTTTTCESLHMGVPVLTLAGAC 629
Query: 471 HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQ 530
HAHNVG SL+T VGL+ +AK+ EYV++A + + + LR LR+ + +SP+CD
Sbjct: 630 HAHNVGKSLMTAVGLERFVAKDVIEYVRIASSYGNKMDEIRELRRGLREKLLRSPLCDAA 689
Query: 531 NFALGLESTYRNMWHRYC 548
F LE YRN+W R+C
Sbjct: 690 GFTQSLEVIYRNLWQRWC 707
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN+GV+ E + A Y + + AEA N+GV++K + +D A++ + L I
Sbjct: 41 YNMGVSLVECGRLVEAESAYRSSIALDSSRAEAYCNIGVVFKMTNRIDDALDACEKCLRI 100
Query: 62 KPNFSQSLNNLGVVYTVQG----KMDAAAEMI---EKAIAANPTYAEAYNNLGVLYRDAG 114
P+F NL +V T QG K + A+ I E+A++ + T EAY NLGV +A
Sbjct: 101 SPDFDLGKKNLSLVLTDQGTELKKKNLLADAIATYERALSYDTTNVEAYYNLGVACAEAE 160
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
AI AYE ++ P N + Y G+D + + +R
Sbjct: 161 EYDRAIIAYENAGRLRPQCAEIWNN--AGVLYKERGNDARAMDYYR 204
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECY-QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIE 90
A A +LG YK +A+E Y ++ ++ + + + N+GV G++ A
Sbjct: 2 AAAWTDLGTTYKANGESKRAMETYAEIIAAVPHHAAAAYYNMGVSLVECGRLVEAESAYR 61
Query: 91 KAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+IA + + AEAY N+GV+++ I A+DA E+CL+I PD
Sbjct: 62 SSIALDSSRAEAYCNIGVVFKMTNRIDDALDACEKCLRISPD 103
>gi|452821043|gb|EME28078.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
SPINDLY-lie protein [Galdieria sulphuraria]
Length = 1154
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/568 (51%), Positives = 372/568 (65%), Gaps = 26/568 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGVAY E KFD A+ YELA FNP E+ NNLGV+YK+ NL++A+ Y+ AL+I
Sbjct: 582 YNLGVAYSEARKFDRAVTHYELAIRFNPSHTESLNNLGVLYKEMGNLERAIASYKAALNI 641
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P + Q+ NNL VVYT+ G D A E + AIA N +YAEA+NNLGVL RD G I AI+
Sbjct: 642 NPQYFQTHNNLAVVYTIMGACDLAKEHLSMAIALNSSYAEAHNNLGVLLRDEGDIHGAIE 701
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFM-RLYSQYTSWDNT- 179
YEQCL+ DP + QNRL A+NY +E + ++ H+ WG RF+ R+ + N+
Sbjct: 702 HYEQCLRTDPRAEMTAQNRLHALNYADEYDVETIYHEHKKWGDRFLKRIQKEMEDAANSG 761
Query: 180 -----------------KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYS 222
+ P L IGY+SPD+FTHSVSYFIEAPL YHD +N ++ +YS
Sbjct: 762 NEVAKTLSERRVVDSIPRGPNYRLRIGYISPDFFTHSVSYFIEAPLYYHDSENMEIFIYS 821
Query: 223 AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGM 282
V K D KT RF+ K WR+I G V + +D+IDIL+EL GHTA N+L +
Sbjct: 822 NVSKPDRKTARFKCFDSVKTH-WREIVGESTLVVCQKILQDRIDILIELAGHTAGNRLDV 880
Query: 283 MACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP 342
MA QPAP+QVTWIGYPNTTGLPT+DYR+TD+ DP T QK E L RLP+CFLCYTPS
Sbjct: 881 MAAQPAPIQVTWIGYPNTTGLPTVDYRLTDNTVDPENTIQKFTENLWRLPKCFLCYTPSA 940
Query: 343 EAGPVCPT--PALTNGF-ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD 399
+A P C T PA+ NG+ ITFGSFN LAK + +W++IL VP SRL++K KPF
Sbjct: 941 DAPP-CSTQIPAVNNGYCITFGSFNVLAKTQANTIALWSKILHLVPKSRLLLKAKPFASS 999
Query: 400 SVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM 459
R RF E +G+ R+DLLPL+ +H++ YSL+DI LD FPYAGTTTTCE+LYM
Sbjct: 1000 FARRRFEYVFEAVGITPDRLDLLPLLPETRNHLETYSLVDICLDPFPYAGTTTTCEALYM 1059
Query: 460 GVPCVTM--AGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSL 517
GVP V++ AG HAH+VG +LL +G L+A +E+EYV +A+ LASD+ L LR SL
Sbjct: 1060 GVPVVSLSAAGQNHAHSVGETLLKSIGHSELVAHSEEEYVDIAVSLASDLDRLKRLRSSL 1119
Query: 518 RDLMSKSPVCDGQNFALGLESTYRNMWH 545
R+ M SP+CDG F LES Y MW
Sbjct: 1120 RNDMLSSPLCDGVTFVKELESAYCQMWQ 1147
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 7/137 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV + ++ K D A+ +Y A NPH AEA N GVIYK++ +L A+E Y+ +L
Sbjct: 473 YNLGVTFADLGKTDDALRYYTEAVQCNPHHAEAYCNAGVIYKEKGDLMTAIEKYKQSLES 532
Query: 62 KPNFSQSLNN-------LGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN LG V+ +G + + +K+++ NP Y +A+ NLGV Y +A
Sbjct: 533 NPNFDLARNNLAIAYSDLGTVWKTKGDLSKSVYYYKKSLSLNPCYPDAHYNLGVAYSEAR 592
Query: 115 SISLAIDAYEQCLKIDP 131
A+ YE ++ +P
Sbjct: 593 KFDRAVTHYELAIRFNP 609
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
++GV K +A+ YQ ALS+ P FSQ+ NLGV + GK D A +A+ N
Sbjct: 440 DIGVRLKLAGLSKEAISYYQEALSVYPTFSQACYNLGVTFADLGKTDDALRYYTEAVQCN 499
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
P +AEAY N GV+Y++ G + AI+ Y+Q L+ +P+ A N LA+ Y + G
Sbjct: 500 PHHAEAYCNAGVIYKEKGDLMTAIEKYKQSLESNPNFDLARNN--LAIAYSDLG 551
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
AI +Y+ A P ++AC NLGV + D D A+ Y A+ P+ +++ N GV+Y
Sbjct: 454 AISYYQEALSVYPTFSQACYNLGVTFADLGKTDDALRYYTEAVQCNPHHAEAYCNAGVIY 513
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI-------SLAIDAYEQCLKI 129
+G + A E ++++ +NP + A NNL + Y D G++ S ++ Y++ L +
Sbjct: 514 KEKGDLMTAIEKYKQSLESNPNFDLARNNLAIAYSDLGTVWKTKGDLSKSVYYYKKSLSL 573
Query: 130 DP 131
+P
Sbjct: 574 NP 575
>gi|428175581|gb|EKX44470.1| hypothetical protein GUITHDRAFT_109591 [Guillardia theta CCMP2712]
Length = 848
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/552 (48%), Positives = 357/552 (64%), Gaps = 11/552 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAY E + + AI+ YEL NP CAEA NNLGVIYKD DNL +A++CY+ AL
Sbjct: 302 MYNLGVAYIEKNEPEKAIICYELTTQMNPRCAEAYNNLGVIYKDFDNLPRALQCYESALR 361
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KP F ++LNN+GVV+T+ + + A A+ P Y+ AY NLG ++D+G AI
Sbjct: 362 VKPAFPEALNNMGVVFTMMCQPEDAFAYFNAALQVYPNYSAAYTNLGKFFQDSGDAEKAI 421
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS--QYTSWDN 178
YE+ L+I + N+ NRLLA+NY D++ AH WG R +RL + + SW N
Sbjct: 422 HYYEKSLEIYSAAPNSAHNRLLALNYSVTRSRDEISAAHEQWG-REIRLQAGPKKNSWKN 480
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
K ER + +GY+SPD+ HSV+YF EA L +N+ V Y A K D T R RE
Sbjct: 481 VKKVERQIKVGYISPDFNKHSVAYFFEAALRCRSRENFHVTCYYAATKEDVMTRRLREM- 539
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
W +I VA M+ D+IDILVEL+GHTA+N+L ++A PAPVQV+WIGYP
Sbjct: 540 ---SDSWVNIASKPPAVVAQMIEADQIDILVELSGHTASNRLDVLALHPAPVQVSWIGYP 596
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
NTTGL TIDYR TD ADP +T QK EEL+RLP+ FLCYTP+ EAGPV P P ++
Sbjct: 597 NTTGLDTIDYRFTDDKADPLDTTQKFTEELVRLPDSFLCYTPAEEAGPVAPPPCEALHYV 656
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGSFNN+AK+ V+ +W +IL ++P+SRL++K + F VR +S L + G+ R
Sbjct: 657 TFGSFNNVAKMNGGVVNLWGKILASLPDSRLLLKSRAFAASQVRESCVSALSEFGVSRNR 716
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG----SVHAHN 474
+D+ ++ +H+ AYS MDISLDTFPYAGTTTT E+L MGVP +T+ + H+ N
Sbjct: 717 IDMQMVMSSTSEHLAAYSRMDISLDTFPYAGTTTTVEALLMGVPVITLQARGDNATHSQN 776
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
VGVSLLT+VGL LIAK+EDEY +A+QLA + + R +LRD + SP+C GQ
Sbjct: 777 VGVSLLTQVGLHELIAKDEDEYCDIAVQLARSPERIRSYRDTLRDRLLSSPLCSGQALMS 836
Query: 535 GLESTYRNMWHR 546
+E+ YR MW R
Sbjct: 837 NVEAEYRRMWTR 848
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ E D AI Y+ A P AEA NN+GV+ K R+ + +A+E ++ L +
Sbjct: 194 YNLGIVLAERGLVDEAIQEYKRALECCPRYAEAHNNIGVLLKGRNQIQEAIESFKACLEL 253
Query: 62 KPNF-------SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF S +L++LG V QG +D A ++A+ NP A+A NLGV Y +
Sbjct: 254 NPNFQLALQNISLALSDLGTVVKSQGMIDDAINFYKQALLYNPKSADAMYNLGVAYIEKN 313
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQN 139
AI YE +++P A N
Sbjct: 314 EPEKAIICYELTTQMNPRCAEAYNN 338
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNL-------DKAVECYQMALSIKPNF 65
KF+ I Y A +P+C A L D D + Y+ A I P +
Sbjct: 130 KFNEGIECYREALSIDPNCTIAAEGLATALTDEGTRLKLLGQGDASYLKYKEASQICPCY 189
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ S NLG+V +G +D A + ++A+ P YAEA+NN+GVL + I AI++++
Sbjct: 190 APSHYNLGIVLAERGLVDEAIQEYKRALECCPRYAEAHNNIGVLLKGRNQIQEAIESFKA 249
Query: 126 CLKIDPDSRNAGQNRLLAMN 145
CL+++P+ + A QN LA++
Sbjct: 250 CLELNPNFQLALQNISLALS 269
>gi|330827422|ref|XP_003291797.1| hypothetical protein DICPUDRAFT_39606 [Dictyostelium purpureum]
gi|325077989|gb|EGC31666.1| hypothetical protein DICPUDRAFT_39606 [Dictyostelium purpureum]
Length = 717
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/569 (46%), Positives = 363/569 (63%), Gaps = 33/569 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV E K + AIV YELA HFN + EA NNLGVIYKD DN+++++ YQMAL
Sbjct: 153 YNLGVLNSEQRKIEKAIVNYELAIHFNSNYTEALNNLGVIYKDLDNIEQSIHYYQMALKS 212
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P FSQSLNNL V++T+QGKM A + I+ A+ P+YAEAYNNLGV+YRD G + +I
Sbjct: 213 NPKFSQSLNNLAVIFTMQGKMKEAKQQIKLAVKECPSYAEAYNNLGVIYRDIGKMDHSIK 272
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRL------------ 169
+YE C+++ P S NA N+LLA+NY + ++++F H+ WGK+++ +
Sbjct: 273 SYEACIQLSPHSLNAHHNKLLALNYSTKFSNNEIFNFHQQWGKQYIEITRIKLLNHLQQQ 332
Query: 170 ----------YSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVV 219
+ Q + + L IGY+S D+FTHSVSYFIE L HD +N+K++
Sbjct: 333 QQIHQQHQHQHQQQQLLQKSLFKKEKLTIGYISGDFFTHSVSYFIEGILHCHDKENFKII 392
Query: 220 VYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNK 279
YS V K D T E++ WR I G+ V +++ D +DILVEL+GHT N+
Sbjct: 393 CYSNVSKEDKTT----ERLKSYNHEWRHITGLSAFDVYDIIKRDNVDILVELSGHTCGNR 448
Query: 280 LGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYT 339
+ +M QPAP+Q+++IGYPNTTGL TI YR+TD + DP +TKQ E L+RLP FLCY
Sbjct: 449 MDVMVLQPAPIQISYIGYPNTTGLETIQYRLTDPIVDPLDTKQLFTESLVRLPHSFLCYY 508
Query: 340 PSPEAGP-----VCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL-CAVPNSRLVVKC 393
S P V P P LTNG+ITFGSFN +AK + K L W IL + P++RL++K
Sbjct: 509 HSGNLLPIGNDYVTPLPVLTNGYITFGSFNIMAKYSDKCLNNWRIILEKSPPSTRLLLKS 568
Query: 394 KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTT 453
KPF C+ + FL L ++G + ++DL+ L DH+Q Y +MDISLDTFPYAGTTTT
Sbjct: 569 KPFVCEKTKQSFLKKLAKMGFNTSQIDLIGLFPQQKDHLQYYKMMDISLDTFPYAGTTTT 628
Query: 454 CESLYMGVPCVTM-AGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
CE+L+MGVP VT+ + + H+HNVG S+LT + + LIA +E EYV +AL L+ D+ L
Sbjct: 629 CEALWMGVPVVTLYSPNCHSHNVGKSILTNLDIPSLIAHSESEYVDIALSLSKDIDRLIT 688
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYR 541
R +LR +M SP+CD NF LE Y+
Sbjct: 689 FRKNLRIIMINSPLCDSINFTKNLELKYK 717
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD-------RDNLDKAVECY 55
N+GV Y + + AI +Y+ A FNP+ NNL + Y D + +L ++ Y
Sbjct: 79 NVGVIYKNLGEILPAIEYYQRALQFNPNYLLVKNNLAIAYNDLGTQTKMKGDLVQSKRYY 138
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+ +L +++ NLGV+ + Q K++ A E AI N Y EA NNLGV+Y+D +
Sbjct: 139 KKSLFYNSKHAETYYNLGVLNSEQRKIEKAIVNYELAIHFNSNYTEALNNLGVIYKDLDN 198
Query: 116 ISLAIDAYEQCLKIDP 131
I +I Y+ LK +P
Sbjct: 199 IEQSIHYYQMALKSNP 214
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
+GV + + + A+E Y+ AL + P + ++L N+GV+Y G++ A E ++A+ NP
Sbjct: 46 MGVTFYENGDSKMALESYKRALELNPIYPEALCNVGVIYKNLGEILPAIEYYQRALQFNP 105
Query: 98 TYAEAYNNLGVLYRDAGS 115
Y NNL + Y D G+
Sbjct: 106 NYLLVKNNLAIAYNDLGT 123
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 72 LGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+GV + G A E ++A+ NP Y EA N+GV+Y++ G I AI+ Y++ L+ +P
Sbjct: 46 MGVTFYENGDSKMALESYKRALELNPIYPEALCNVGVIYKNLGEILPAIEYYQRALQFNP 105
Query: 132 DSRNAGQNRLLAMN 145
+ N +A N
Sbjct: 106 NYLLVKNNLAIAYN 119
>gi|302835307|ref|XP_002949215.1| hypothetical protein VOLCADRAFT_104274 [Volvox carteri f.
nagariensis]
gi|300265517|gb|EFJ49708.1| hypothetical protein VOLCADRAFT_104274 [Volvox carteri f.
nagariensis]
Length = 1736
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/447 (57%), Positives = 323/447 (72%), Gaps = 8/447 (1%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKD--RDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
A YE+A FNP CAEA NNLGVI+K+ RDN+++AVECY AL+I+P+F QSLNNLGV
Sbjct: 842 AAFMYEMALAFNPACAEAQNNLGVIWKEQARDNIERAVECYSAALAIRPSFPQSLNNLGV 901
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
V T QG+ A ++ A+ +PTY EA+NNLGVL RD G I A+ +Y +CL++DP R
Sbjct: 902 VMTAQGRAADALTLLMAAVNGSPTYTEAHNNLGVLQRDVGCIPEALASYSRCLELDPHCR 961
Query: 135 NAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF---MRLYSQYTSWDNTKDPERPLVIGYV 191
NAGQNRLLA+NYI G + + AHR+WG+ F ++ D ++DP+RPL IGY+
Sbjct: 962 NAGQNRLLALNYIYPGEAELVSSAHREWGELFQSTVQPLPPLGPGDRSRDPDRPLRIGYI 1021
Query: 192 SPDYFTHSVSYFIEAPLVYH-DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYG 250
SPD FTHSVSYF EAPL +H + Y+ VYS V K DAKT R R GG+WR++
Sbjct: 1022 SPDLFTHSVSYFAEAPLTHHAPGRGYQHFVYSCVPKPDAKTARLRAGTEAAGGVWREVAR 1081
Query: 251 IDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRI 310
+ E ++A +VR D+ID+LVELTGHTANN+LG+MA +PAPVQ+TWIGYPN+TGL +DYR+
Sbjct: 1082 LSEGELAELVRRDEIDLLVELTGHTANNRLGVMARRPAPVQLTWIGYPNSTGLKAVDYRL 1141
Query: 311 TDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKIT 370
TD + DP T+Q VEEL+RLP CFLCYTP+ +A PV P PAL NG+ITFGSFNNLAKIT
Sbjct: 1142 TDQVCDPWTTEQTFVEELVRLPGCFLCYTPALDAPPVAPPPALANGYITFGSFNNLAKIT 1201
Query: 371 PKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430
P+VL++W IL AVP SRLV+K KPF C++ R L L +G+E RVDLLPL N
Sbjct: 1202 PQVLRLWGAILAAVPRSRLVLKNKPFACEAARAHVLQQLAAVGVEPWRVDLLPLAPGNAQ 1261
Query: 431 HMQAYSLMDISLDTFPYAG--TTTTCE 455
H+ YSLMDISLD FPYA T T C+
Sbjct: 1262 HLATYSLMDISLDPFPYAAPNTKTHCQ 1288
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 9/133 (6%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+YNLGV GE+ + D A+ +Y A P A+A NLGV+ ++R + +AV Y+ AL+
Sbjct: 671 LYNLGVVAGELRQGDAALEYYRAAIAAEPRYAQAHCNLGVLLRERGRVVEAVAAYEAALA 730
Query: 61 IKPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
PNF+ NNL + T +G++D + E+A++ P +A+A NLGV Y +
Sbjct: 731 AAPNFTIVRNNLAIALTDLGTHIKNEGRLDEGIALYERALSYAPRHADALYNLGVAYGEK 790
Query: 114 G--SISLAIDAYE 124
G +++A DA+
Sbjct: 791 GDLQVTVATDAFR 803
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%)
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+A +E EYV LA+ ASDV ALA LR SLR+ M SP+CDG F LE YR +W R+C
Sbjct: 1451 VAHSETEYVALAVAHASDVKALAELRSSLRERMLSSPLCDGPAFLRRLEGVYRALWRRHC 1510
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN--------LDKAVECY 55
LG Y A+ Y + P L V+ D+ + +AV Y
Sbjct: 598 LGALYQSQGLLGDAVAVYRRSHELRPDDPTIRVGLAVVLTDQGTKLKNAGAPVAEAVSRY 657
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
Q A+S+ PN++ +L NLGVV + DAA E AIAA P YA+A+ NLGVL R+ G
Sbjct: 658 QAAVSLCPNYAPALYNLGVVAGELRQGDAALEYYRAAIAAEPRYAQAHCNLGVLLRERG 716
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ Y+ A P+ A A NLGV+ + D A+E Y+ A++ +P ++Q+ NLGV+
Sbjct: 653 AVSRYQAAVSLCPNYAPALYNLGVVAGELRQGDAALEYYRAAIAAEPRYAQAHCNLGVLL 712
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS-------ISLAIDAYEQCLKI 129
+G++ A E A+AA P + NNL + D G+ + I YE+ L
Sbjct: 713 RERGRVVEAVAAYEAALAAAPNFTIVRNNLAIALTDLGTHIKNEGRLDEGIALYERALSY 772
Query: 130 DPDSRNAGQNRLLAMNYINEG 150
P +A N L + Y +G
Sbjct: 773 APRHADALYN--LGVAYGEKG 791
>gi|66809151|ref|XP_638298.1| hypothetical protein DDB_G0285263 [Dictyostelium discoideum AX4]
gi|60466746|gb|EAL64795.1| hypothetical protein DDB_G0285263 [Dictyostelium discoideum AX4]
Length = 864
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/594 (43%), Positives = 366/594 (61%), Gaps = 52/594 (8%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNP------------HCAEACNNLGVIYKDRDNLD 49
YNLGV + E + + +I+ YELA HFN EA NNLGV+YKD DN++
Sbjct: 257 YNLGVLFSERKQIEKSIMNYELAIHFNEINNKNNSNNNNNQYVEALNNLGVLYKDIDNIE 316
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+++ YQ+AL P+FSQSL+NL ++YT+QGKM A + ++ AI +PTYA+AYNNLGV+
Sbjct: 317 QSIHYYQLALKSNPSFSQSLSNLAIIYTMQGKMKLAKKYVKLAIKESPTYADAYNNLGVV 376
Query: 110 YRDAGSISLAIDAYEQCLKIDP-DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR 168
YRD G IS +I +YE+C++ P +S NA N+LLA+NY E + +++E H+ WG+ F+
Sbjct: 377 YRDIGKISQSIKSYEKCIQCSPTNSLNAQHNKLLALNYSTEFNYSQIYEIHQQWGQSFLN 436
Query: 169 LYSQYTSWDNTKDPERPLVI----------GYVSPDYFTHSVSYFIEAPLVYHDYQNYKV 218
+ D+ + GY+S D+F HSVSYFIE L +H+ + +K+
Sbjct: 437 SLNLKYGIDSNNNNINNNNGIIKKKDKLIIGYISGDFFIHSVSYFIEGILKFHNKEEFKI 496
Query: 219 VVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANN 278
+ YS + K D T E++ G WR I G +V ++++D++DILVEL+GHT N
Sbjct: 497 ICYSNISKQDTTT----ERLKSYGHEWRHITGKPTMEVVQLIKDDQVDILVELSGHTCGN 552
Query: 279 KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY 338
++ +MA QP+P+Q+++IGYPNTTGL TI YRITDS+ DP +TKQ+ E LIR+P+CFL Y
Sbjct: 553 RMDVMALQPSPIQISYIGYPNTTGLKTIQYRITDSIVDPLDTKQQFTETLIRMPQCFLTY 612
Query: 339 TPSPEAGPVC----------------------PTPALTNGFITFGSFNNLAKITPKVLQV 376
P A P P L NG+ITFGSFN +AK + K L
Sbjct: 613 FPPISAASSSNDNISPPSPSPPPLPPPPPLPPPPPFLKNGYITFGSFNVMAKYSDKCLNC 672
Query: 377 WARILCAVP-NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
W IL P +RL++K KPF C+ + F L + G +VDL+ L DH+Q Y
Sbjct: 673 WKLILDRSPIGTRLLLKSKPFACEDTKKSFSKRLIKFGFNLNQVDLVGLFSHQKDHLQYY 732
Query: 436 S-LMDISLDTFPYAGTTTTCESLYMGVPCVTMAG-SVHAHNVGVSLLTKVGLKHLIAKNE 493
S ++DISLDTFPYAGTTTTCESL+MGVP V+++ S H +NVG S+L + L L+A N
Sbjct: 733 SQMLDISLDTFPYAGTTTTCESLWMGVPTVSLSTPSYHCNNVGKSILHTLNLPQLVAYNH 792
Query: 494 DEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
+YV++AL L+ D+ L R +LR+LM SP+CD NF LE Y+ +++ +
Sbjct: 793 GQYVEIALALSRDIDKLIFFRSNLRNLMINSPLCDNLNFTKHLELKYKQIFNSH 846
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 1 MYNLGVA-YGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL 59
++ +GV Y E + + +A+ Y A NP+ E N+GVI K+ ++ ++E Y+ AL
Sbjct: 146 LFYMGVVFYEEGISYSLALESYSKALLLNPNYPEVLCNIGVIRKNLGEIETSIEYYKRAL 205
Query: 60 SIKPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
I PN+S NN+ + Y + G++D A E +K++ N Y Y NLGVL+ +
Sbjct: 206 QINPNYSLVKNNIAIAYNDLGTKVKLNGEIDLAKEFYKKSLHYNFKYEGTYYNLGVLFSE 265
Query: 113 AGSISLAIDAYE 124
I +I YE
Sbjct: 266 RKQIEKSIMNYE 277
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVI-YKDRDNLDKAVECYQMALSIK 62
+G + E K A+ Y LA N + A +GV+ Y++ + A+E Y AL +
Sbjct: 115 VGTEFREKKKMIDALKMYYLASRSNVKNSTALFYMGVVFYEEGISYSLALESYSKALLLN 174
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS------- 115
PN+ + L N+GV+ G+++ + E ++A+ NP Y+ NN+ + Y D G+
Sbjct: 175 PNYPEVLCNIGVIRKNLGEIETSIEYYKRALQINPNYSLVKNNIAIAYNDLGTKVKLNGE 234
Query: 116 ISLAIDAYEQCL 127
I LA + Y++ L
Sbjct: 235 IDLAKEFYKKSL 246
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG-KMDAAAEMIEKAIAAN 96
+G ++++ + A++ Y +A S +L +GVV+ +G A E KA+ N
Sbjct: 115 VGTEFREKKKMIDALKMYYLASRSNVKNSTALFYMGVVFYEEGISYSLALESYSKALLLN 174
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
P Y E N+GV+ ++ G I +I+ Y++ L+I+P+ N +A+ Y + G KL
Sbjct: 175 PNYPEVLCNIGVIRKNLGEIETSIEYYKRALQINPNYSLVKNN--IAIAYNDLGTKVKL- 231
Query: 157 EAHRDWGKRFMR 168
D K F +
Sbjct: 232 NGEIDLAKEFYK 243
>gi|303271811|ref|XP_003055267.1| glycosyltransferase family 41 protein [Micromonas pusilla CCMP1545]
gi|226463241|gb|EEH60519.1| glycosyltransferase family 41 protein [Micromonas pusilla CCMP1545]
Length = 1090
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/623 (41%), Positives = 348/623 (55%), Gaps = 76/623 (12%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECY------ 55
YNLGVA E+ + D AI+ YE P+CAEA NNLGV++++R+N+++AVECY
Sbjct: 396 YNLGVAQAEVGEIDRAIIAYEHTLRLKPNCAEAWNNLGVLHRERNNVERAVECYNRAIAI 455
Query: 56 ----------------------------QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
Q A++ P+++ + NNLGV+ G + A
Sbjct: 456 APAFAQPLNNVGVVYTTQGNAGAALEALQRAIAADPSYAVAHNNLGVLLRDTGDVPEALA 515
Query: 88 MIEKAIAANPTYAEAYNN--LGVLYRDAGSISLAIDAYEQ-CLKIDPDSRNAGQNRLLAM 144
+ +P + A N L + Y G ++ DA+ + + + A R A
Sbjct: 516 SYAECERCSPDHRNATQNYLLSLNYVHPGESAVVSDAHARWGARFQEIAGEALPRRRFAR 575
Query: 145 NYINEGHDD------KLFEAHRDWGKRFMRLYSQYTSWDNTK------------------ 180
+ + G + + E G RF+ L + D+
Sbjct: 576 SDLGAGRERVGGALRRRRENSDARGARFIGLTRRDADSDSDADADSDSDADYSDDVDDAD 635
Query: 181 --------------DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVK 226
P R LV+GYVS D +THSVSYF AP HD ++ VYS +
Sbjct: 636 DAEARDALLSGRALSPRRRLVVGYVSSDLYTHSVSYFAFAPFRDHDPSRVELFVYSTTPR 695
Query: 227 ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
DA++ R R+ V G WRD + E ++A +R D++D+LVELTGHTANNKLG MA +
Sbjct: 696 EDAQSTRLRDAVAAARGTWRDCAAMSESELAETIRGDRVDVLVELTGHTANNKLGTMALR 755
Query: 287 PAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP 346
PAPVQ TWIGYPN+TGL +IDYR+TD++ DP +T Q VE+L+RLP CFL YTPS EA P
Sbjct: 756 PAPVQATWIGYPNSTGLTSIDYRLTDAICDPLDTTQSFVEKLVRLPGCFLSYTPSAEAPP 815
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFL 406
V P P +T GF+TFG FN LAK+TP+V +VW R+L AVPNSRLVVK KPF C ++R RFL
Sbjct: 816 VAPAPCMTAGFVTFGCFNALAKVTPRVRKVWGRLLAAVPNSRLVVKAKPFLCPTIRARFL 875
Query: 407 STLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466
+ + G+ES R+DL PL H+ Y +MD++LDTFPYAGTTTTCE+++MGVP +TM
Sbjct: 876 TQMLSEGVESWRIDLSPLTNGTTHHLSMYGMMDVALDTFPYAGTTTTCEAMWMGVPVLTM 935
Query: 467 AGSVHAHNVGVSLLTKVGLKHLIA-KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
G HAHNVG SL+ VGL A + EDEYV LASD LA R LR M P
Sbjct: 936 IGGCHAHNVGASLVEAVGLSEECATRTEDEYVAKGTALASDFERLAATRAGLRRRMRDGP 995
Query: 526 VCDGQNFALGLESTYRNMWHRYC 548
+CDG+ F +E Y M+ ++C
Sbjct: 996 MCDGRAFMGRVEDAYVEMFEKWC 1018
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 104/191 (54%), Gaps = 34/191 (17%)
Query: 16 MAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQS------- 68
+AI YE A F+P+ AEA NLGV + +D+A+ Y+ L +KPN +++
Sbjct: 376 LAIRGYERALTFDPNAAEATYNLGVAQAEVGEIDRAIIAYEHTLRLKPNCAEAWNNLGVL 435
Query: 69 ---------------------------LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
LNN+GVVYT QG AA E +++AIAA+P+YA
Sbjct: 436 HRERNNVERAVECYNRAIAIAPAFAQPLNNVGVVYTTQGNAGAALEALQRAIAADPSYAV 495
Query: 102 AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
A+NNLGVL RD G + A+ +Y +C + PD RNA QN LL++NY++ G + +AH
Sbjct: 496 AHNNLGVLLRDTGDVPEALASYAECERCSPDHRNATQNYLLSLNYVHPGESAVVSDAHAR 555
Query: 162 WGKRFMRLYSQ 172
WG RF + +
Sbjct: 556 WGARFQEIAGE 566
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 23/146 (15%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YNLGV E + A+ YELA I K ++ A++ Y+ L
Sbjct: 302 FYNLGVVLSETNRHAEAMACYELA----------------IKKLAGDVVGAIDAYEQCLR 345
Query: 61 IKPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
+ PN + N+ + + G + A E+A+ +P AEA NLGV +
Sbjct: 346 VNPNHALGRGNISIALSEHATAVKASGDVHLAIRGYERALTFDPNAAEATYNLGVAQAEV 405
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQN 139
G I AI AYE L++ P+ A N
Sbjct: 406 GEIDRAIIAYEHTLRLKPNCAEAWNN 431
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 25/137 (18%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP-------NFSQSLNNLG 73
Y P A A +G +Y+ L +A ++ AL P + +L +LG
Sbjct: 213 YAAVLAVEPTHALALRAVGALYQAHGFLSEAAGAFKSALRSDPADRPTIERLAATLTDLG 272
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD------------------AGS 115
+ G +AA E +A A + YA A+ NLGV+ + AG
Sbjct: 273 TRTKLLGSPNAAIEYYREASAVDGGYAPAFYNLGVVLSETNRHAEAMACYELAIKKLAGD 332
Query: 116 ISLAIDAYEQCLKIDPD 132
+ AIDAYEQCL+++P+
Sbjct: 333 VVGAIDAYEQCLRVNPN 349
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL++ P ++ G+ + G A + +A PT+A A +G LY+ G +S
Sbjct: 182 ALALTPRCLDAIAKKGMCHQALGSHQDAYDAYAAVLAVEPTHALALRAVGALYQAHGFLS 241
Query: 118 LAIDAYEQCLKIDPDSR 134
A A++ L+ DP R
Sbjct: 242 EAAGAFKSALRSDPADR 258
>gi|62319217|dbj|BAD94413.1| spindly [Arabidopsis thaliana]
gi|62319734|dbj|BAD95289.1| spindly [Arabidopsis thaliana]
Length = 535
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/230 (90%), Positives = 219/230 (95%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGV+YKDRDNLDKAVECYQMALS
Sbjct: 298 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDNLDKAVECYQMALS 357
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKPNF+QSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEA+NNLGVLYRDAG+I++AI
Sbjct: 358 IKPNFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAI 417
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
DAYE+CLKIDPDSRNAGQNRLLAMNYINEG DDKLFEAHRDWG RF RL+ QYTSWDN K
Sbjct: 418 DAYEECLKIDPDSRNAGQNRLLAMNYINEGLDDKLFEAHRDWGWRFTRLHPQYTSWDNLK 477
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
DPERP+ IGY+SPD+FTHSVSYFIEAPL +HDY YKVVVYSAVVKADAK
Sbjct: 478 DPERPITIGYISPDFFTHSVSYFIEAPLTHHDYTKYKVVVYSAVVKADAK 527
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 82/172 (47%), Gaps = 41/172 (23%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ YE A P AEA N+GVIYK+R +L+ A+ CY+ L++
Sbjct: 190 YNLGVVYSEMMQYDNALSCYEKAALERPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAV 249
Query: 62 KPNF-----------------------------------------SQSLNNLGVVYTVQG 80
PNF + ++ NLGV Y
Sbjct: 250 SPNFEIAKNNMAIALTDLGTKVKLEGDVTQGVAYYKKALYYNWHYADAMYNLGVAYGEML 309
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
K D A E A NP AEA NNLGVLY+D ++ A++ Y+ L I P+
Sbjct: 310 KFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDNLDKAVECYQMALSIKPN 361
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N + ++ Y AL I P+++ + NLGVVY+ + D A EKA
Sbjct: 157 DLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAALER 216
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV+Y++ G + +AI YE+CL + P+ A N +A+
Sbjct: 217 PMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIAL 264
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV+Y +
Sbjct: 175 YYE-ALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAALERPMYAEAYCNMGVIYKNR 233
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G ++ A E+ +A +P + A NN+ + D G+
Sbjct: 234 GDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGT 269
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + EA G+ + ++ + A +C+ A+ + P+ + +L +
Sbjct: 58 KFADALALYEAMLEKDSKNVEAHIGKGICLQTQNKGNLAFDCFSEAIRLDPHNACALTHC 117
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G+++ +G++ AAE +KA+ A+ +Y A L ++ D AG+ I Y +
Sbjct: 118 GILHKEEGRLVEAAESYQKALMADASYKPAAECLAIVLTDLGTSLKLAGNTQEGIQKYYE 177
Query: 126 CLKIDP 131
LKIDP
Sbjct: 178 ALKIDP 183
>gi|374999506|ref|YP_004975594.1| hypothetical protein AZOLI_p60009 [Azospirillum lipoferum 4B]
gi|357428477|emb|CBS91434.1| conserved protein of unknown function; putative TPR domains
[Azospirillum lipoferum 4B]
Length = 652
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/526 (41%), Positives = 316/526 (60%), Gaps = 6/526 (1%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A P AEA NL I + R + + A Y AL +KP+ + +L NLG ++ ++
Sbjct: 124 AIRLKPDYAEAHFNLANILRSRGDREAAKAAYGEALRLKPDMAAALCNLGDLHKGAVELA 183
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
A E A+ A+P AEA+NNLG ++ G I AI +++ L+ P N LLA
Sbjct: 184 RAVECFVAALKADPKSAEAWNNLGETLKEMGRIEEAIGVFQKGLEAHPTHALMHSNLLLA 243
Query: 144 MNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSY 202
++Y + +F+AH W +R L N +DPER L +GYVSPD+ HSV++
Sbjct: 244 LHYTPAVPPETIFKAHAVWAQRHADPLLPAGKRHANPRDPERRLRVGYVSPDFCAHSVAF 303
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
F E + HD ++V Y A ++D T R K + G WR + GID+ + AA++ +
Sbjct: 304 FAEPLIREHDRGRFEVFCYHAATRSDVVTGRL--KGVADG--WRSLVGIDDARAAALIEQ 359
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP-ETK 321
D IDILV+LTGHTANN+L + A +PAPVQ TW+GYP+TTG+ ID+R +D++A+PP E
Sbjct: 360 DGIDILVDLTGHTANNRLTLFARKPAPVQATWLGYPDTTGMRAIDWRFSDAVAEPPGEAD 419
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
+ E ++RLP F Y P + P P TNG +TFGSFNN +K+T +V++VW+ IL
Sbjct: 420 RLSAERIVRLPHGFHSYRPPVDVAPPAEPPFRTNGHVTFGSFNNTSKVTGEVVRVWSEIL 479
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
VPNSRL+VK + R R+L+T + G+++ R++LL I H++AY +DI
Sbjct: 480 KRVPNSRLIVKSAQMGDEETRRRYLNTFVKFGIDAGRIELLSRIDAADGHLRAYDRIDIG 539
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LD FPY GTTTTCE+L+MGVP VT+AG+ H VG SLLT GL L+A +E +Y+ A+
Sbjct: 540 LDPFPYNGTTTTCEALWMGVPVVTVAGANHVARVGASLLTHCGLNELVASDEADYIATAV 599
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
LA D + LR ++RD ++ +P+ D FA +E+ YR MW +
Sbjct: 600 ALAGDPDRMTTLRRTMRDRLNAAPLTDYTGFARSVEAAYRAMWRDW 645
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+A Y+ L+ P+ + + NNL V+ +G + A + +AIA N T ++N G L
Sbjct: 48 EAEAGYRAVLTADPDHANANNNLAVILRARGDWNEAIDCYRRAIARNATDPFVHSNHGCL 107
Query: 110 YRDAGSISLAIDAYEQCLKIDPD 132
D G + A +A +++ PD
Sbjct: 108 LLDLGRAAEAEEALRTAIRLKPD 130
>gi|281206518|gb|EFA80704.1| glycosyltransferase [Polysphondylium pallidum PN500]
Length = 683
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/557 (39%), Positives = 335/557 (60%), Gaps = 31/557 (5%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
D + + Y LA N A A +LGV+ +R A+ Y AL ++PN+ ++L N+GV
Sbjct: 127 DESYLIYHLALLLNDRYAPAHFHLGVVSYERGERLLALSHYANALDLRPNYPEALCNVGV 186
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTY-------AEAYNNLGVLYR-----------DAGSI 116
++ G +D A E ++A+ N Y + A +LG Y+ D G I
Sbjct: 187 IHKNNGDLDGAIEFYQRALKYNANYQLVKFNMSVALCDLGTRYKVAGDLERATESDEGKI 246
Query: 117 SLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
AI+AY++ + P+S NA N+LLA+NY N +F++H+ WGK +++ ++
Sbjct: 247 DEAIEAYDKSILYTPNSINAPHNKLLALNYSNRTLL-SIFKSHKRWGKNYIKKDKLIQNY 305
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
+ L IGY+SPD+FTHSVSYFI+ L +HD + + YS V+K D TIR +
Sbjct: 306 KTELKEKDKLTIGYISPDFFTHSVSYFIDGILKHHDRNLFNIYCYSNVIKEDDTTIRLKS 365
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
WR I G + VA M+ +D +DILV+L GHT +N+L ++A +PAP+ ++++G
Sbjct: 366 Y----NHCWRSIVGKSDVVVAQMIVDDCVDILVDLAGHTCSNRLDVVALKPAPITISYLG 421
Query: 297 YPNTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPSPE---AGPVCPTPA 352
YPNTTGLP IDY+ TDS DP T Q++ E+L RL CFL YTP A P P+
Sbjct: 422 YPNTTGLPNIDYKFTDSYTDPVGSTVQQYTEQLYRLDSCFLTYTPPQHCLAAEPSVLPPS 481
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL 412
NG+IT+G+ N ++K + +VL+ W++++ +VPN RL++K K F C + FL L+
Sbjct: 482 EQNGYITYGTCNVVSKYSDQVLECWSKLMRSVPNCRLLLKSKSFTCPTTCASFLERLQHF 541
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
G+E R LL L+ DH++ Y+ +D++LDTFPYAGTTTTCE+++MGVP VT+ GS H+
Sbjct: 542 GIEVARTTLLALLPSQEDHLKIYNQIDVALDTFPYAGTTTTCEAIWMGVPVVTLVGSSHS 601
Query: 473 HNVGVSLLTKVG----LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
HNVG S+L+ + +K+LI ++++EY++ A++LA+D L R SLR M S +CD
Sbjct: 602 HNVGQSILSNIASDLPIKNLITESQEEYIETAIKLANDRELLRLYRSSLRQTMLNSNICD 661
Query: 529 GQNFALGLESTYRNMWH 545
F LE Y+++W+
Sbjct: 662 NAKFTNNLEKAYKDIWN 678
>gi|288963188|ref|YP_003453467.1| TPR repeat-containing protein [Azospirillum sp. B510]
gi|288915440|dbj|BAI76923.1| TPR repeat-containing protein [Azospirillum sp. B510]
Length = 654
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/549 (40%), Positives = 315/549 (57%), Gaps = 7/549 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G +M + A A P AEA NLG + ++LD A+ CY AL +K
Sbjct: 108 NFGCLLVDMGQAAEAQAALRRAIELQPDYAEAHFNLGNALRGANDLDGALACYTEALRLK 167
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + +L+N+G + + ++ A E A+ A P E NNLG ++ G I+ A+
Sbjct: 168 PDMAAALSNMGDLLKGRAELSRAVEYFMAALRAAPQMPEPCNNLGETLKEQGRITEAVTV 227
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKD 181
+++ L + P N A+NY + + ++ HR W +R L + N
Sbjct: 228 FQKGLGVHPTHAIMHSNLAFALNYTADVPVEMIYRVHRHWAERHADPLLPAGRAHANDPR 287
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P+R L IGYVSPD+ HSVS+F+E + HD ++V+ Y ++DA T R R +
Sbjct: 288 PDRKLRIGYVSPDFCAHSVSFFVEPVIREHDRAAFEVICYPCSGRSDAVTERLRAAADR- 346
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
W I G+ ++ AA + D IDIL++L GHTA N+L + A +PAPVQVTW+GYPNTT
Sbjct: 347 ---WVPIVGLSDEAAAARIEADGIDILIDLAGHTAENRLLLFARKPAPVQVTWLGYPNTT 403
Query: 302 GLPTIDYRITDSLADPPE-TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
G+P IDYR+TD +ADP Q E L+RLP F CY P A P P L +G +TF
Sbjct: 404 GMPAIDYRLTDGVADPVGLADQLSAERLVRLPHGFHCYQPPVVALQPRP-PVLDSGVVTF 462
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNN +K+T +V++VWA IL VPN+RL++K + D R R+ ++ G++ RV+
Sbjct: 463 GSFNNTSKVTAEVVRVWAEILKRVPNARLLLKSRQMGDDETRARYRNSFITHGIDPDRVE 522
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LL I H++AY +DI+LD FPY GTTTTCE+L+MGVP VT+AG H VG SLL
Sbjct: 523 LLARIPAADGHLRAYDRLDIALDPFPYNGTTTTCEALWMGVPVVTLAGRSHVARVGASLL 582
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T VGL+ LIA +E EY+ A+ LA D ALA LR +R + SP+ D + F LE+
Sbjct: 583 TNVGLEELIASDEAEYIAKAVALAGDPAALAGLRAGMRARLEASPLTDHKGFTRSLEAAL 642
Query: 541 RNMWHRYCK 549
R MW + +
Sbjct: 643 RAMWRSWAE 651
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 4 LGVAYG--EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
GVA G + + A Y H +P A NNL +I + R +A+ CY+ A+
Sbjct: 39 FGVALGHHQAGRIAEAEAGYRAVLHLDPDHPHANNNLALILRGRGGHAEALACYRRAVKR 98
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+ +N G + G+ A + +AI P YAEA+ NLG R A + A+
Sbjct: 99 TPDDPHLHSNFGCLLVDMGQAAEAQAALRRAIELQPDYAEAHFNLGNALRGANDLDGALA 158
Query: 122 AYEQCLKIDPD 132
Y + L++ PD
Sbjct: 159 CYTEALRLKPD 169
>gi|39997695|ref|NP_953646.1| TPR domain/SEC-C motif domain-containing protein [Geobacter
sulfurreducens PCA]
gi|39984587|gb|AAR35973.1| TPR domain/SEC-C motif domain protein [Geobacter sulfurreducens
PCA]
Length = 585
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/549 (39%), Positives = 322/549 (58%), Gaps = 4/549 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ G A+ DMA+ Y A P A+A NLGV+++ + LD+A ++ A+S
Sbjct: 38 LWRAGNAHLAGGALDMALSCYREAVRLRPGFAQAHYNLGVVFQQKGLLDEAAASFRSAIS 97
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+++++ NNLG + QG++D +A+ +AIA P +A AY+NLG R G + +
Sbjct: 98 FNRDYAKAYNNLGYILATQGRLDESADCFNRAIAIEPGFAAAYHNLGTTLRHQGRLDETL 157
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
A+ I+P + LL M + ++ D+ LF H WG++ + + +
Sbjct: 158 AAFRTAHAINPHD-PVFHSDLLMMLHYSDMDDETLFREHVRWGEQHAPAAASVPTHQCDR 216
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP R L IGYVS D+ H V YF+ L HD +++ YS + + R +
Sbjct: 217 DPGRKLRIGYVSGDFGKHPVGYFLLPFLENHDRSQFEICCYSERGQRQEDDVTAR--IKG 274
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+WR G+ + VA M+R D IDILV+L GHTA+N+L + A +PAPVQVTW+GYPNT
Sbjct: 275 HADLWRRTIGLGDAAVAEMIRADGIDILVDLAGHTAHNRLRVFALKPAPVQVTWLGYPNT 334
Query: 301 TGLPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TGL +DYRITD++ADPP + H E+LIRL + FLCYTP A PV P L +T
Sbjct: 335 TGLRAMDYRITDAVADPPGSADALHTEQLIRLEQGFLCYTPPAGAPPVGEAPCLAGAGVT 394
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FGSFNNLAK++P+V+ W+ IL VP SRL++K K F ++ R R G+ R+
Sbjct: 395 FGSFNNLAKVSPQVIDAWSAILGRVPGSRLMLKFKGFADETCRRRVSDAFGARGVSPDRL 454
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+L+ + +DH+ Y+ +D++LDTFPY GT TTC++L+MGVP +T G+ H VG S+
Sbjct: 455 ELVSFVENFNDHLALYNRLDLALDTFPYNGTATTCDALWMGVPVLTCCGTRHVARVGASI 514
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
LT +GL LI + +EY+ A LA+D LA LR +R ++ SP+CD FA +E+
Sbjct: 515 LTSLGLPELITHSPEEYISAAAALAADPARLAALRRDMRPRLAASPLCDPTGFARRMETA 574
Query: 540 YRNMWHRYC 548
R++W R+C
Sbjct: 575 LRDIWRRWC 583
>gi|409913047|ref|YP_006891512.1| TPR domain/SEC-C motif domain-containing protein [Geobacter
sulfurreducens KN400]
gi|307635063|gb|ADI85350.2| TPR domain/SEC-C motif domain protein [Geobacter sulfurreducens
KN400]
Length = 585
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/551 (39%), Positives = 322/551 (58%), Gaps = 8/551 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ G A+ DMA+ Y A P A+A NLGV+++ + LD+A ++ A+S
Sbjct: 38 LWRAGNAHLAGGALDMALSCYREAVRLRPGFAQAHYNLGVVFQQKGLLDEAAASFRSAIS 97
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+++++ NNLG + QG++D +A+ +AIA P +A AY+NLG R G + +
Sbjct: 98 FNRDYAKAYNNLGYILATQGRLDESADCFNRAIAIEPGFAAAYHNLGTTLRHQGRLDETL 157
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
A+ I+P + LL M + ++ D+ LF H WG++ + + +
Sbjct: 158 AAFRTAHAINPHD-PVFHSDLLMMLHYSDMDDETLFREHVRWGEQHAPAAASVPAHQCDR 216
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYS--AVVKADAKTIRFREKV 238
DP R L IGYVS D H V YF+ L HD +++ YS + D T R R
Sbjct: 217 DPGRKLRIGYVSGDLGKHPVGYFLLPLLESHDRSQFEICCYSERGQRQEDDVTARIR--- 273
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+WR G+ + VA M+R D IDILV+L GHTA+N+L + A +PAPVQVTW+GYP
Sbjct: 274 -GHADLWRRTMGLGDAAVAEMIRADGIDILVDLAGHTAHNRLKVFALKPAPVQVTWLGYP 332
Query: 299 NTTGLPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
NTTGL +DYRITD++ADPP + H E+LIRL + FLCYTP A PV P L
Sbjct: 333 NTTGLRAMDYRITDAVADPPGSADALHTEQLIRLEQGFLCYTPPAGAPPVGEAPCLAGAG 392
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+TFGSFNNLAK++P+V+ W+ IL VP SRL++K K F ++ R R G+
Sbjct: 393 VTFGSFNNLAKVSPQVIDAWSAILGRVPGSRLMLKFKGFADETCRRRVSDAFGARGVSPD 452
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R++L+ + +DH+ Y+ +D++LDTFPY GT TTC++L+MGVP +T G+ H VG
Sbjct: 453 RLELVSFVEDFNDHLALYNRLDLALDTFPYNGTATTCDALWMGVPVLTCCGTRHVARVGA 512
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S+LT +GL LI + +EY+ A LA+D LA LR +R ++ SP+CD FA +E
Sbjct: 513 SILTSLGLPELITHSPEEYISAAAALAADPARLAALRRDMRPRLAGSPLCDPAGFARRME 572
Query: 538 STYRNMWHRYC 548
+ R++W R+C
Sbjct: 573 TALRDIWRRWC 583
>gi|253702411|ref|YP_003023600.1| hypothetical protein GM21_3825 [Geobacter sp. M21]
gi|251777261|gb|ACT19842.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 589
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/542 (39%), Positives = 309/542 (57%), Gaps = 14/542 (2%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y L V GE D A A P +A N LGV + D+A CY AL I
Sbjct: 47 YLLAVLVGEQGHPDQAAKLLRQALRAEPENVKALNALGVALQQMGERDQAAACYGEALRI 106
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE-AYNNLGVLYRDAGSISLAI 120
P F ++ NL + V ++ A ++ + IA P YN VL+ S+ A
Sbjct: 107 DPRFQEARVNLALFLKVGMRLAEAEALLSRGIALEPASVRLRYNYANVLHYQGRSLE-AA 165
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
AY + L++DP +A QN L A++Y + D ++F H + + + +
Sbjct: 166 GAYREVLRLDPQHLDARQNLLFALHYSPQFSDRRIFAEHLRAAR-----SAPFRLPPSPS 220
Query: 181 DPERP--LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
P R + IGY+SPD+ +H+V+ FIE L HD + +++ Y+ + + D R E+V
Sbjct: 221 VPRRGGRIRIGYLSPDFRSHAVASFIEPVLKAHDRERFEIFCYANLPRPD----RVTERV 276
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
WRD+Y I ++ A M+ D +D+L++L GHT+ N+L + A +PAP+Q+TWIGYP
Sbjct: 277 KALSEHWRDLYNIPDQIAALMIAADALDVLIDLAGHTSGNRLPLFARRPAPLQITWIGYP 336
Query: 299 NTTGLPTIDYRITDSLADPP-ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
+TTGL +DYRITD ADPP ++++ H E L+RLP F C+ P EA V P P L G
Sbjct: 337 DTTGLKQMDYRITDRHADPPGKSERYHTETLLRLPRSFSCFLPPQEAPEVAPVPCLATGA 396
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+TFGSFNNLAK+TP+ + +W R+L AVP SRL++K +PF VR R S + G+
Sbjct: 397 VTFGSFNNLAKVTPETIALWCRVLDAVPGSRLLLKGRPFADSGVRERIASLFARGGIAGE 456
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
RV+L P N H+ Y +DI+LDTFPY GTTTTCE+L+MGVP VT+AG+ HA G
Sbjct: 457 RVELHPGEPENSAHLAQYGRVDIALDTFPYNGTTTTCEALWMGVPVVTLAGTRHAARTGA 516
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S+LT GL L+A++E EY+++A +LA+D L+ R R+ ++ SP+ D LE
Sbjct: 517 SILTNCGLDELVAEDEGEYLEIARRLAADRGRLSEFRKGARERLAASPLLDAAGVTRELE 576
Query: 538 ST 539
+
Sbjct: 577 AA 578
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 49 DKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
++A Q + P ++ L V+ QG D AA+++ +A+ A P +A N LGV
Sbjct: 26 EEARTQLQQLVQEDPGCARGWYLLAVLVGEQGHPDQAAKLLRQALRAEPENVKALNALGV 85
Query: 109 LYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ G A Y + L+IDP + A N
Sbjct: 86 ALQQMGERDQAAACYGEALRIDPRFQEARVN 116
>gi|253702410|ref|YP_003023599.1| hypothetical protein GM21_3824 [Geobacter sp. M21]
gi|251777260|gb|ACT19841.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 1106
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 327/582 (56%), Gaps = 13/582 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG A + + A A +P NNLG+ ++A + ++ A+ +
Sbjct: 80 SLGFALARLGRMGEAAGELAAAVRLDPGDPGLSNNLGLALSALSRGEEARDAFEEAIRLD 139
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +++ NNL +++ G+ A +A+ P + EA+ NL + G AI
Sbjct: 140 PLYAEPHNNLSILFERFGESAHAIAAALEALRLKPEFPEAHLNLANALKSQGRHQEAIAH 199
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
Y + L++ PD R A + L A+ Y +++LF H +G R ++ N DP
Sbjct: 200 YREALRLRPDYREAESSLLFALLYPAHTPEEELFAEHAAFGARCRFSAPRHV---NDPDP 256
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
ERPL +GY+S D+ H+V+ FIE L +HD +++ YS V D ++ E++
Sbjct: 257 ERPLKLGYLSADFREHAVARFIEPVLAHHDRSRFRIYCYSNVSAPDQRS----ERLAALA 312
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+R I G+ ++KV +VR D IDILV+L+GH+A N+L + A +PAPVQVTW+GYP +TG
Sbjct: 313 DCFRSIAGMTDQKVEELVRADGIDILVDLSGHSAGNRLPVFARRPAPVQVTWLGYPFSTG 372
Query: 303 LPTIDYRITDSLADPP-ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
L IDYRITD + DPP ET++ H EEL+RLP F C+ P +A P P NG +TFG
Sbjct: 373 LEAIDYRITDPVCDPPGETERYHSEELLRLPGTFSCFLPPDDAPPPVGAPLSKNGRVTFG 432
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
SFNN AKITP+ + +W+ +L AVP S L++K C R R G+E R++L
Sbjct: 433 SFNNPAKITPETVLLWSGVLRAVPGSHLLLKGYSLACAETRLRLEEAFAGHGIERERLEL 492
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ DH+ Y +DI+LD++PY GTTT+CE+L+MGVP VT+AGS H VG SLL
Sbjct: 493 MGNTPSYRDHLALYDRVDIALDSYPYNGTTTSCEALWMGVPVVTLAGSSHRSRVGASLLQ 552
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+GL+ L+A ++V LA LA D L+ LR +LR M+ SP+ DG +F LE +R
Sbjct: 553 ALGLEGLVAHEARKFVALAAALAGDPERLSGLRSTLRRTMAASPLTDGASFTRHLEKAWR 612
Query: 542 NMWHRYCKGDV-----PSLKRMEMLQQQVVSEEPSKFSEPTK 578
++W R+C+ P+++ + LQ + S+F P +
Sbjct: 613 DVWARWCRSHPAQAPDPAVQGAQYLQHGRLDRALSQFLIPLR 654
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A +P AEAC NLG +A+ A + P +S++ +LG G
Sbjct: 30 YRRALQLDPGYAEACFNLGCALDRLSGPAEALPHLARAAELSPEWSRARGSLGFALARLG 89
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+M AA + A+ +P NNLG+ A DA+E+ +++DP
Sbjct: 90 RMGEAAGELAAAVRLDPGDPGLSNNLGLALSALSRGEEARDAFEEAIRLDP 140
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
+L A ECY+ AL + P ++++ NLG A + +A +P ++ A +L
Sbjct: 22 DLSGAAECYRRALQLDPGYAEACFNLGCALDRLSGPAEALPHLARAAELSPEWSRARGSL 81
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
G G + A +++DP N LA++ ++ G + +
Sbjct: 82 GFALARLGRMGEAAGELAAAVRLDPGDPGLSNNLGLALSALSRGEEAR 129
>gi|345871985|ref|ZP_08823926.1| Tetratricopeptide TPR_2 repeat-containing protein [Thiorhodococcus
drewsii AZ1]
gi|343919796|gb|EGV30539.1| Tetratricopeptide TPR_2 repeat-containing protein [Thiorhodococcus
drewsii AZ1]
Length = 2237
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/564 (39%), Positives = 319/564 (56%), Gaps = 14/564 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+ M + A+ Y A + P+ A+A +N G++ K+ D ++A+E L I+
Sbjct: 243 NQGLVQQHMGFMEEALQSYARAVNLQPNYAKAHSNRGLLLKELDRSEEALEACSNVLRIQ 302
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ +LN G+V G +DAAA+ E +A P A N G +++D G I+ A+
Sbjct: 303 SDDLDALNLKGLVLQDLGHLDAAADCFESILAVQPKNTFALTNRGNVFKDQGFIAEALGY 362
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH----RDWGKRFMRLYSQYTSWDN 178
Y Q L + P+ A QN L +NY ++ +K+F H R G R +L S +
Sbjct: 363 YRQALDVQPEMLQARQNLLFCLNYQSDISREKIFAEHCQFERYQGSRIQQLASIASV--- 419
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
+D +R L IG+VS D+ HSV+ F+ L + D +N+++ Y +K D T FR
Sbjct: 420 AEDADRQLRIGFVSGDFRQHSVASFLLPVLEHIDRRNFQIFCYITSLKRDEITKIFR--- 476
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ IW + G+ + VR D+ID+L +L+GH+ N + A +PAPVQ++WIGYP
Sbjct: 477 -RLADIWVEASGLSAAALGDRVRSDQIDLLFDLSGHSEGNAILAFAAKPAPVQISWIGYP 535
Query: 299 NTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTP--SPEAGPVCPTPALTN 355
NTTGL IDYR+ D + DP E H E LIRLP+ FLCY P + + V P L
Sbjct: 536 NTTGLNAIDYRLVDEMTDPIGEADAFHSECLIRLPQGFLCYRPWNTGASLSVSGLPCLDI 595
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
G ITFGSFNN+AK+TP L +W +L A+P+SRLV+K L L + G++
Sbjct: 596 GRITFGSFNNIAKLTPDTLDLWGNVLRALPDSRLVLKSHSVRDTRFWDYMLGRLTERGVD 655
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
S RV +LP +H+ Y +DI+LDT+PY GTTTTCE+L+MGVP VT+AG HA V
Sbjct: 656 SHRVKILPRAPSYLEHLSQYREIDIALDTYPYQGTTTTCEALFMGVPVVTLAGDRHAGRV 715
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
GVSL+ +VGL LIA + D+YV++A+ LA+D L+ LRM++R S +CD F
Sbjct: 716 GVSLMNQVGLPSLIANSADDYVRIAVSLATDRERLSELRMTMRARFESSSLCDELGFTRM 775
Query: 536 LESTYRNMWHRYCKGDVPSLKRME 559
E R MW +C GD P + +E
Sbjct: 776 FEQVLRQMWRIWCAGDSPRVFEVE 799
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/562 (38%), Positives = 319/562 (56%), Gaps = 14/562 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++NLG A + +F+ AI ++ A NP EA NLG YKD + D+A++CY AL
Sbjct: 931 IHNLGYALLNLSRFEEAIGCFKRAIEINPDYVEAHINLGTSYKDTNRFDEAMKCYDKALD 990
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + N GV G++ A + +A+ P Y +A+NNLG +Y++ G + A+
Sbjct: 991 LNPENPEVHCNRGVALDELGRLGEAVDSQIRALELLPIYPQAHNNLGNVYKNIGLLDDAV 1050
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW---- 176
Y + L+ PD + A N LL +NY + ++F H+ + ++ L SQ
Sbjct: 1051 SCYRKALESQPDLKAAYSNLLLCLNYDSSISPARIFAEHQAFEQQ---LASQVVPLPPLS 1107
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
KDP R L +G VS D HSV++F+ L ++V YS + D T +
Sbjct: 1108 TRNKDPGRVLRLGLVSGDLRLHSVTFFLLPVLENLSRDQFQVFCYSKSHRRDDVT----Q 1163
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
+ + W + G+ ++++A +R D+ID+L++L GHT+ N L A +PAPVQ+TWIG
Sbjct: 1164 ALQQASYAWFECSGLSDQELAERIRADEIDLLMDLNGHTSPNALLAFAARPAPVQITWIG 1223
Query: 297 YPNTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTP--SPEAGPVCPTPAL 353
YPNTTGL +DYRI D + DP E H E+LIRLP FLCY P S E PV P L
Sbjct: 1224 YPNTTGLKAMDYRIVDGITDPVSEADAFHSEKLIRLPRGFLCYRPWTSGEDLPVGLPPCL 1283
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
+TFGSFNNLAKIT L +W ++ AVP++RL++K V +R ++ L G
Sbjct: 1284 ERNRVTFGSFNNLAKITNTTLDLWGGVMKAVPDARLLLKTHTASDIDVWNRLVAYLADQG 1343
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ + RV++LP +H+ Y +DI+LD FPY GTTTTCE+L+MGVP V++ G HA
Sbjct: 1344 IATDRVEMLPRAPSYMEHLVQYQRLDIALDAFPYHGTTTTCEALFMGVPVVSLMGDRHAS 1403
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
VG SLLT GL LIA++ ++Y+++A LA D +L +R LRD ++ P+ D F
Sbjct: 1404 RVGGSLLTHAGLPELIAESTEDYIRIARDLARDPESLKKMRAGLRDRLATHPLRDEIGFT 1463
Query: 534 LGLESTYRNMWHRYCKGDVPSL 555
LE R MW +C+GD P L
Sbjct: 1464 RELEQALRQMWRIWCEGDPPRL 1485
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/557 (36%), Positives = 310/557 (55%), Gaps = 8/557 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+G A ++ +FD A+ Y+ A N AE N + + A+ + L+I+
Sbjct: 1677 NMGAALSDLGRFDEALNCYDQALLINQDSAEVHANRSLTLYRMGRFEDALASFDHLLNIR 1736
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ +LN G++ G+ A + A+ P A+A N G +++D G + A
Sbjct: 1737 PDDVDALNKRGILLQNCGRFREALASFDAALVVKPESADALTNRGNVFKDQGDLETASSC 1796
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK-RFMRLYSQYTSWDNTKD 181
Y Q + I P+ A NRLL +NY + D+++ H + + + ++ S ++
Sbjct: 1797 YRQAMGIQPNLIEAWHNRLLCLNYQDAVSRDQVYAEHLSFDRHQASSVFRLPPSSAIDRN 1856
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
PER L IG VS D+ HSV++FI L D + + Y ++ D T+ FR K
Sbjct: 1857 PERCLRIGLVSSDFRHHSVAFFILPILERLDRRVCQTYCYMTSLRQDEVTVTFR----KL 1912
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+W + G+ + +A +R D+IDIL++L+GHT N L A +P+PVQ+TW+GYPNTT
Sbjct: 1913 ADVWVECAGLGARALANRIRADRIDILIDLSGHTDGNFLLTFAARPSPVQITWVGYPNTT 1972
Query: 302 GLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPSPEAGP--VCPTPALTNGFI 358
GL +DYR+ D + DP + H E LIRLP+ FLCY P A V P P G I
Sbjct: 1973 GLQAMDYRLVDEVTDPVGDADVYHSERLIRLPQGFLCYRPLDSAFTLDVGPLPCRERGQI 2032
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGSFNNLAK++ L++W +L AVPN+RLV+K V R ++ + G++ R
Sbjct: 2033 TFGSFNNLAKVSSTTLRLWCDLLLAVPNARLVLKTPTTTEGHVWGRVVAYFIEHGIDRER 2092
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
++ LP H+ +Y ++DI+LDT+PY GTTTTCE+L+MGVP +T+ G H VG S
Sbjct: 2093 LETLPRASGYLKHLASYRVIDIALDTYPYNGTTTTCEALFMGVPVITLLGDRHVARVGAS 2152
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
LLT+VGL LIA +E+EY++++ L+ D L LR LR + +SP+ D F LE
Sbjct: 2153 LLTRVGLTDLIAGSEEEYIRISKDLSGDKDRLCALRADLRRRVEQSPLRDELTFTRTLEV 2212
Query: 539 TYRNMWHRYCKGDVPSL 555
+R MW +C+GD P +
Sbjct: 2213 AFRQMWRIFCQGDQPRV 2229
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A+E + A + P ++ LN+L Y + D A EM A+ P AE +NN G++
Sbjct: 189 ALEVLETARRLTPADAEVLNSLARAYRGLDQFDKALEMYRDALDLEPASAEIWNNQGLVQ 248
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
+ G + A+ +Y + + + P+ A NR L + ++ +
Sbjct: 249 QHMGFMEEALQSYARAVNLQPNYAKAHSNRGLLLKELDRSEE 290
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P ++ +N LG G++ A ++ + +P + AY N+G D G A+
Sbjct: 1633 LAPGDAECINALGSALQHLGRLSEALGCFQRVLDIDPRFVLAYANMGAALSDLGRFDEAL 1692
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
+ Y+Q L I+ DS NR L + + D
Sbjct: 1693 NCYDQALLINQDSAEVHANRSLTLYRMGRFED 1724
>gi|197120102|ref|YP_002140529.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089462|gb|ACH40733.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 1106
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/582 (37%), Positives = 332/582 (57%), Gaps = 13/582 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG A + + A A +P NNLG+ ++A + ++ A+ +
Sbjct: 80 SLGFALARLGRMGEAASELAAAVRLDPGDPGLSNNLGLALSALSRGEEAKDAFEEAIRLD 139
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +++ NNL +++ G+ A +A+ P + EA+ NL + G AI
Sbjct: 140 PLYAEPHNNLSILFERFGESAHAIAAALEALRLKPEFPEAHLNLANALKSQGRHQEAIAH 199
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
Y + L++ PD A + L A+ Y +++LF H +G R ++ N DP
Sbjct: 200 YREALRLRPDYPEAESSLLFALLYPAHTPEEELFAEHAAFGARCRFAAPRHL---NDPDP 256
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
ERPL +GY+S D+ H+V+ FIE L HD ++V YS V D ++ EK+
Sbjct: 257 ERPLKLGYLSADFREHAVARFIEPVLARHDRALFQVYCYSNVPVPDQRS----EKLASMA 312
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+R+I G+ ++KV +VR D IDILV+L+GH+A N+L + A +PAPVQVTW+GYP +TG
Sbjct: 313 DCFRNIAGMTDQKVEELVRADGIDILVDLSGHSAGNRLPVFARRPAPVQVTWLGYPFSTG 372
Query: 303 LPTIDYRITDSLADPP-ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
L IDYRITD++ DPP ET++ H EEL+RLP F C+ P +A P P P +T+G +TFG
Sbjct: 373 LDAIDYRITDAVCDPPGETERYHSEELLRLPGTFSCFLPPDDAPPPGPAPCITSGRVTFG 432
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
SFNN AKITP+ + +W+ +L AVP S+L++K C R R T G+E R++L
Sbjct: 433 SFNNPAKITPETVLLWSGVLRAVPGSQLLLKGYSLACAETRLRLEETFAGHGIERERLEL 492
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
L DH+ Y +DI+LD++PY GTTTTCE+L+MGVP VT+AGS H VG S+L
Sbjct: 493 LGNTPSYRDHLSLYDRVDIALDSYPYNGTTTTCEALWMGVPVVTLAGSAHRSRVGASILQ 552
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+GL+ L+A ++V LA LA D L+ LR +LR M+ SP+ DG +F LE +R
Sbjct: 553 ALGLEGLVAHEARKFVVLAQALAGDRERLSGLRTTLRQTMAASPLTDGASFTRHLEKAWR 612
Query: 542 NMWHRYCKGDV-----PSLKRMEMLQQQVVSEEPSKFSEPTK 578
++W R+C+ P+++ + LQ + S+F P +
Sbjct: 613 DIWGRWCRSHPAQAPDPAVQGAQYLQHGRLDRALSQFLIPLR 654
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A +P AEAC NLG +A+ A+ + P +S++ +LG G
Sbjct: 30 YRRALQLDPGYAEACFNLGCTLDRLSGPAEALPHLARAVELSPEWSRARGSLGFALARLG 89
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+M AA + A+ +P NNLG+ A DA+E+ +++DP
Sbjct: 90 RMGEAASELAAAVRLDPGDPGLSNNLGLALSALSRGEEAKDAFEEAIRLDP 140
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
+L A ECY+ AL + P ++++ NLG A + +A+ +P ++ A +L
Sbjct: 22 DLSGASECYRRALQLDPGYAEACFNLGCTLDRLSGPAEALPHLARAVELSPEWSRARGSL 81
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
G G + A +++DP N LA++ ++ G + K
Sbjct: 82 GFALARLGRMGEAASELAAAVRLDPGDPGLSNNLGLALSALSRGEEAK 129
>gi|430747186|ref|YP_007206315.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
gi|430018906|gb|AGA30620.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
Length = 827
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/550 (37%), Positives = 315/550 (57%), Gaps = 10/550 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG + +F+ A A +P AEA +NL +R L +A Y+ A+ +
Sbjct: 280 YNLGSVLSRLGRFEDAESICRQAITLDPDSAEAHHNLAFALSERGQLTEAETNYRRAIQL 339
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP F NL V GK+D A +A+ +P +EA NLG + + G I+ A+
Sbjct: 340 KPEFVDPYVNLTSVLGKFGKLDEAEACSREAVRLDPNRSEALVNLGFVLIEKGHIAEALA 399
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF---MRLYSQYTSWDN 178
AY + ++DP+SR + L +NY E L HR WG R +R S D
Sbjct: 400 AYREAERVDPNSRPVQSSYLYGLNYDPEADPATLLAEHRRWGLRQQEDVRAIELNPSHDR 459
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
+D RPL +GYVS D+ H V+YF+ L HD + + V YS V DA T ++
Sbjct: 460 ARD--RPLRVGYVSADFRVHPVAYFLRHILTNHDRRQVEPVCYSEVTAPDAMTA----EL 513
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
WR IYG+ +++VA +V+ D++DILV+L+GHTA +++G+ A +PAP++V+++GYP
Sbjct: 514 ESLADAWRPIYGMTDEQVADLVQRDRLDILVDLSGHTARHRMGLFAHKPAPIEVSYLGYP 573
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
NTTGL TIDY +TD++ DPP+ E LP+ F CY+P EA V PAL +
Sbjct: 574 NTTGLTTIDYLLTDAVTDPPDDPTWSSETPYHLPDVFCCYSPPEEAPEVNTLPALRAKGV 633
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGS + L K+ +VL++WA +L ++P +RL++ + + L+ + G+ + +
Sbjct: 634 TFGSLHKLPKLNARVLELWAELLRSIPKARLLL-YRNNLRGQRKEEILAFFKAQGVAADQ 692
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
++L +I H Q Y +DISLD FP++G TT CESL+MGVP VT+ G+ HA + S
Sbjct: 693 LELRNIIEGGGSHYQVYQDIDISLDVFPWSGHTTACESLWMGVPIVTIRGNRHAGRMTAS 752
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
+LT +GL IA+ ++Y+ +A + A+D+ LA LR ++R M+ SP+ DG+ + LE
Sbjct: 753 VLTCLGLSDWIAETPEQYLDIAQRFATDLDRLAELRRTMRTRMNGSPMGDGRTWTKNLEK 812
Query: 539 TYRNMWHRYC 548
YR MWHR+C
Sbjct: 813 AYRVMWHRWC 822
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y LGVA + A+ ++ P AEA N+LG+++ +L++AV C+ + L +
Sbjct: 42 YLLGVACHGLGNLTGALGAFQQTLRLQPDHAEAQNHLGIVWAQAGSLEEAVRCFLLTLQL 101
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+PN + NL V + QG++D A K + P AEA+ +LGVL R G AI
Sbjct: 102 QPNSLDAYKNLAVTFERQGRLDEAVACDRKVVELKPDLAEAHRHLGVLLRKQGKWGEAIV 161
Query: 122 AYEQCLKIDPD 132
A EQ L+I P+
Sbjct: 162 ALEQVLRIKPE 172
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG+ + + A+V ++ A P A A +N+ V+ K LD+A+ + A+
Sbjct: 177 LNDLGLLLEMTGQLEEAVVRFQAAIRLRPEFAGAYSNMSVVLKQLGRLDEAITSGREAVR 236
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P F+ + NNLGV+ +G D A +A+ +P + EAY NLG + G A
Sbjct: 237 LDPGFAGAHNNLGVILEKEGGWDEATTCFHEALRLDPRFVEAYYNLGSVLSRLGRFEDAE 296
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMN 145
Q + +DPDS A N A++
Sbjct: 297 SICRQAITLDPDSAEAHHNLAFALS 321
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LGV + K+ AIV E P E N+LG++ + L++AV +Q A+ ++
Sbjct: 145 HLGVLLRKQGKWGEAIVALEQVLRIKPELPETLNDLGLLLEMTGQLEEAVVRFQAAIRLR 204
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+ VV G++D A +A+ +P +A A+NNLGV+ G A
Sbjct: 205 PEFAGAYSNMSVVLKQLGRLDEAITSGREAVRLDPGFAGAHNNLGVILEKEGGWDEATTC 264
Query: 123 YEQCLKIDP 131
+ + L++DP
Sbjct: 265 FHEALRLDP 273
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ V ++ + D AI A +P A A NNLGVI + D+A C+ AL +
Sbjct: 213 NMSVVLKQLGRLDEAITSGREAVRLDPGFAGAHNNLGVILEKEGGWDEATTCFHEALRLD 272
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F ++ NLG V + G+ + A + +AI +P AEA++NL + G ++ A
Sbjct: 273 PRFVEAYYNLGSVLSRLGRFEDAESICRQAITLDPDSAEAHHNLAFALSERGQLTEAETN 332
Query: 123 YEQCLKIDPD 132
Y + +++ P+
Sbjct: 333 YRRAIQLKPE 342
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL V + + D A+ P AEA +LGV+ + + +A+ + L IK
Sbjct: 111 NLAVTFERQGRLDEAVACDRKVVELKPDLAEAHRHLGVLLRKQGKWGEAIVALEQVLRIK 170
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++LN+LG++ + G+++ A + AI P +A AY+N+ V+ + G + AI +
Sbjct: 171 PELPETLNDLGLLLEMTGQLEEAVVRFQAAIRLRPEFAGAYSNMSVVLKQLGRLDEAITS 230
Query: 123 YEQCLKIDPDSRNAGQN 139
+ +++DP A N
Sbjct: 231 GREAVRLDPGFAGAHNN 247
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG+ + + + A+ + L P+ +A NL V ++ + LD+AV C + + +K
Sbjct: 77 HLGIVWAQAGSLEEAVRCFLLTLQLQPNSLDAYKNLAVTFERQGRLDEAVACDRKVVELK 136
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ +++ +LGV+ QGK A +E+ + P E N+LG+L G + A+
Sbjct: 137 PDLAEAHRHLGVLLRKQGKWGEAIVALEQVLRIKPELPETLNDLGLLLEMTGQLEEAVVR 196
Query: 123 YEQCLKIDPDSRNAGQN 139
++ +++ P+ A N
Sbjct: 197 FQAAIRLRPEFAGAYSN 213
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+A + Y+ LS P++ + LGV G + A ++ + P +AEA N+LG++
Sbjct: 22 QAEQAYRQVLSADPSYIPAWYLLGVACHGLGNLTGALGAFQQTLRLQPDHAEAQNHLGIV 81
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK--------------L 155
+ AGS+ A+ + L++ P+S +A +N LA+ + +G D+ L
Sbjct: 82 WAQAGSLEEAVRCFLLTLQLQPNSLDAYKN--LAVTFERQGRLDEAVACDRKVVELKPDL 139
Query: 156 FEAHRDWG 163
EAHR G
Sbjct: 140 AEAHRHLG 147
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
G++ A + + ++A+P+Y A+ LGV G+++ A+ A++Q L++ PD A QN
Sbjct: 18 GRIAQAEQAYRQVLSADPSYIPAWYLLGVACHGLGNLTGALGAFQQTLRLQPDHAEA-QN 76
Query: 140 RL 141
L
Sbjct: 77 HL 78
>gi|322421642|ref|YP_004200865.1| hypothetical protein GM18_4175 [Geobacter sp. M18]
gi|320128029|gb|ADW15589.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
M18]
Length = 1104
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/583 (37%), Positives = 314/583 (53%), Gaps = 16/583 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + + A A P A NNLG+ ++A + A+ +
Sbjct: 80 NLGFALARVGRMEEAAQKLREACRLAPENAGYRNNLGLALSALGEGEQAQASFLEAIRLD 139
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + L+NL +++ G+ A + +A+ P Y EA++NL + G AI
Sbjct: 140 PLYPEPLSNLAILFERFGQSAEAIRSLSEALRLRPDYPEAHHNLANTLKSQGRHREAIAH 199
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK--RFMRLYSQYTSWDNTK 180
Y + L++ P A L + Y EG ++ +F H +G RF DN
Sbjct: 200 YREALRLRPGYEEAQSALLFTLLYPAEGAEETIFAEHAAFGASHRF-----PAKPHDNAP 254
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
P+R L +GYVS D+ H+V+ FIE L +HD ++V YS V D ++ +
Sbjct: 255 VPDRVLNVGYVSADFREHAVARFIEPVLSHHDRSRFRVFCYSNVTVPDQRSGHIAGLCDR 314
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+ +I G+ + ++R D IDILV+L+GH+A N+L + A +PAPVQVTWIGYP +
Sbjct: 315 ----FVNIAGLPDAAAEELLRRDGIDILVDLSGHSAGNRLTLFARKPAPVQVTWIGYPFS 370
Query: 301 TGLPTIDYRITDSLADPP-ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TGL TIDYRI+D++ DPP E+ + H EEL+RLP F C+ P +A PV P+ G IT
Sbjct: 371 TGLETIDYRISDAVCDPPGESGRFHSEELLRLPGTFSCFAPPEQAPPVSALPSQACGAIT 430
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FGSFNN AKITP+ + +WA +L +VP SRL+VK C R R + G+ R+
Sbjct: 431 FGSFNNPAKITPETVALWAGVLRSVPGSRLLVKGYSLACPGSRKRLEESFASHGIGPERL 490
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+L DH+ Y +DI+LDTFPY GTTTTCE+L+MGVP VT+AGS H VG SL
Sbjct: 491 ELTGNTPSYRDHLALYGRVDIALDTFPYNGTTTTCEALWMGVPVVTLAGSAHRSRVGASL 550
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L +GL L+A + +V+LA LA D L LR +LR+ M+ +P+ DG F LE T
Sbjct: 551 LHALGLDALVAHDSGAFVELARALALDQARLKGLRETLRESMAAAPLTDGAGFTRALEET 610
Query: 540 YRNMWHRYC----KGDVPSLKRMEMLQQQVVSEEPSKFSEPTK 578
W R+C P+L+ + L + + F EP +
Sbjct: 611 LTRAWGRWCGQPASAQGPALRGRDFLLKGRLDRALHCFLEPLR 653
>gi|197120103|ref|YP_002140530.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089463|gb|ACH40734.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 589
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 309/545 (56%), Gaps = 12/545 (2%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y L V GE D A A P +A N LGV + D+ CY AL I
Sbjct: 47 YLLAVLVGEQGFPDQAAKLLRQALRAEPENVKALNALGVALQQMGERDQGAACYGEALRI 106
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE-AYNNLGVLYRDAGSISLAI 120
F ++ NL ++ ++ A ++ + IA P YN VL+ S+ A
Sbjct: 107 DSRFQEARVNLALLLKEGMRLAEAEALLSQGIALEPESVRLRYNYANVLHYQGRSLE-AT 165
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH-RDWGKRFMRLYSQYTSWDNT 179
AY + L++DP +A QN L ++Y + D ++F H R +RL S +
Sbjct: 166 GAYREVLRLDPQHLDARQNLLFTLHYSPQFSDRQIFAEHLRAARSAPLRLPSS----PSV 221
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
R + IGY+SPD+ +H+V+ FIE L HD + +++ Y+ + + D R E++
Sbjct: 222 PRRGRRIRIGYLSPDFRSHAVASFIEPVLKKHDRERFEIFCYANLPRPD----RVTERIK 277
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
WRD+Y I ++ A M+ D +D+L++L GHT+ N+L + A +PAP+Q+TWIGYP+
Sbjct: 278 GLCEHWRDLYNIPDQIAALMIAADALDVLIDLAGHTSGNRLPLFARKPAPLQITWIGYPD 337
Query: 300 TTGLPTIDYRITDSLADPP-ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGL +DYRITD ADPP ++++ H E L+RLP F C+ P +A V P P L G +
Sbjct: 338 TTGLKQMDYRITDRHADPPGKSERYHTEALLRLPRSFSCFLPPADAPEVAPPPCLATGAV 397
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGSFNNLAK+TP+V+ +W R+L AVP SRL++K +PF VR R S G+ R
Sbjct: 398 TFGSFNNLAKVTPEVIALWCRVLHAVPGSRLLLKGRPFEDSGVRERIASQFSTGGIGGER 457
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
++L P + H+ Y +DI+LDTFPY GTTTTCE+L+MGVP VT+AG+ HA G S
Sbjct: 458 IELNPGEPESSAHLAQYGRVDIALDTFPYNGTTTTCEALWMGVPVVTLAGTRHAARTGAS 517
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
+L GL L+A+NE+EY+++A ++A+D L LRM R+ +S SP+ D LE+
Sbjct: 518 ILANCGLDELVAENEEEYLEIARRMAADRERLLELRMGARERLSASPLLDAAGVTRELEA 577
Query: 539 TYRNM 543
+
Sbjct: 578 ALEGI 582
>gi|309256371|gb|ADO61013.1| spindly [Helianthus annuus]
Length = 266
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/256 (71%), Positives = 209/256 (81%), Gaps = 9/256 (3%)
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
P PAL+NGF+TFGSFNNLAKITPKVLQVWA+ILCAVPNSRL+VKCKPFCCDSVR +FLST
Sbjct: 2 PAPALSNGFVTFGSFNNLAKITPKVLQVWAKILCAVPNSRLIVKCKPFCCDSVRQKFLST 61
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
LEQLGLES RVDL+PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM G
Sbjct: 62 LEQLGLESHRVDLVPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMGG 121
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
VHAHNVGVSLLT VGL+ L+AK EDEY++LA++LASDV +L++LRM LR+LMSKS +C+
Sbjct: 122 LVHAHNVGVSLLTAVGLERLVAKTEDEYIRLAIELASDVASLSSLRMDLRNLMSKSALCN 181
Query: 529 GQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGSPG 588
G F GLES YR+MW YC G VPSLKRME +Q Q P S + +K+ G
Sbjct: 182 GSKFITGLESAYRDMWRGYCNGKVPSLKRMETIQNQT----PQLTS-----LLSKDDPFG 232
Query: 589 SVMPNGFNQASPSMLN 604
S+ NGF P +L
Sbjct: 233 SIKENGFTLGPPRLLT 248
>gi|309256349|gb|ADO61002.1| spindly [Helianthus annuus]
Length = 266
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/256 (71%), Positives = 207/256 (80%), Gaps = 9/256 (3%)
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
P PAL+NGF+TFGSFNNLAKITPKVLQVWA+ILCAVPNSRL+VKCKPFCCDSVR +FLST
Sbjct: 2 PAPALSNGFVTFGSFNNLAKITPKVLQVWAKILCAVPNSRLIVKCKPFCCDSVRQKFLST 61
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
LEQLGLES RVDL+PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM G
Sbjct: 62 LEQLGLESHRVDLVPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMGG 121
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
VHAHNVGVSLLT VGL L+AK EDEY++LA++LASDV +L++ RM LR+LMSKS +C+
Sbjct: 122 LVHAHNVGVSLLTAVGLXRLVAKTEDEYIRLAIELASDVASLSSXRMDLRNLMSKSALCN 181
Query: 529 GQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGSPG 588
G F GLES YR+MW YC G VPSLKRME +Q Q P S + +K+ G
Sbjct: 182 GSKFITGLESAYRDMWRGYCNGKVPSLKRMETIQNQT----PQLTS-----LLSKDDPFG 232
Query: 589 SVMPNGFNQASPSMLN 604
S+ NGF P +L
Sbjct: 233 SIKENGFTLGXPRLLT 248
>gi|222053752|ref|YP_002536114.1| hypothetical protein Geob_0648 [Geobacter daltonii FRC-32]
gi|221563041|gb|ACM19013.1| TPR repeat-containing protein [Geobacter daltonii FRC-32]
Length = 621
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/542 (38%), Positives = 308/542 (56%), Gaps = 22/542 (4%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A Y A P ++A NNLG + +++ L++A ++ AL++ P++ + NLG+V
Sbjct: 90 AETLYRQALTLEPGFSQALNNLGSLCRNQGRLEEAAGYFRQALALDPDYLTAKVNLGIVL 149
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
+ AA + E+ I A+P A AY NLG G A+ AY + L +PD+ A
Sbjct: 150 RLLLSFSDAAALFEEIIEAHPECAAAYFNLGNTLLSMGDAEAAVTAYRKALSCEPDNMGA 209
Query: 137 GQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKDPERPLVIGYVSPDY 195
N L+AM + +L++ HR + +F L +Q N DP R L IGYVS D+
Sbjct: 210 FDNLLIAMAFSPTVDASQLYDEHRRFTTKFATPLKNQIKLHGNRADPNRRLKIGYVSADF 269
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H+V+YFIE L H +N+++ Y+ V D R + M WR+IYG+ +
Sbjct: 270 RLHAVAYFIEPVLAAHGRENFEIHCYANVGTPD----RITDHTMSLADQWRNIYGMSDAM 325
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
VA ++RED IDILV+L GHT+ ++L + A +PAP+QV +IGYPNT+GL TIDY ITD +
Sbjct: 326 VAELIREDGIDILVDLAGHTSGHRLLVFARKPAPIQVEFIGYPNTSGLDTIDYLITDEIT 385
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQ 375
P + Q EE +RLPE C++P V P NG IT G FNN+AKI +V+
Sbjct: 386 SPEKLPQLFSEEPLRLPETRYCFSPVIATPEVSILPMQQNGSITLGCFNNVAKINQRVIT 445
Query: 376 VWARILCAVPNSRLVVKCK----PFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH-D 430
+WA+IL + +SRL++K + P C + + RF G++ R+ +L H
Sbjct: 446 LWAKILHTLRDSRLLLKNRLFDDPGCARTFQDRF----THAGIDPGRI-----MLRGHSS 496
Query: 431 HMQA---YSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH 487
HM+ YSL+DI+LDTFP+ G TTTCE+L+MGVP V M+G A +SLL G +
Sbjct: 497 HMETLREYSLVDIALDTFPFPGGTTTCEALWMGVPVVAMSGVTFAERQAISLLANAGHRE 556
Query: 488 LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
IA +E+EY+++ L LA+D LA +R +LR + SP+ D F LE YR MW ++
Sbjct: 557 WIATSEEEYMEIVLDLAADPVRLAQVRSNLRHELQSSPLMDAPRFVALLEDAYRRMWLKW 616
Query: 548 CK 549
C+
Sbjct: 617 CR 618
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
+P +A +LGVI R + +A C++ ++ P+ +Q +L + QGK A
Sbjct: 34 SPEHLDALLSLGVILAHRGDTTRAETCFRQIVAHTPH-AQGFFHLANLLCNQGKTADAET 92
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
+ +A+ P +++A NNLG L R+ G + A + Q L +DPD A N + + +
Sbjct: 93 LYRQALTLEPGFSQALNNLGSLCRNQGRLEEAAGYFRQALALDPDYLTAKVNLGIVLRLL 152
Query: 148 NEGHD-----DKLFEAHRDWGKRFMRL 169
D +++ EAH + + L
Sbjct: 153 LSFSDAAALFEEIIEAHPECAAAYFNL 179
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ +L F A +E +P CA A NLG + + AV Y+ ALS +
Sbjct: 144 NLGIVLRLLLSFSDAAALFEEIIEAHPECAAAYFNLGNTLLSMGDAEAAVTAYRKALSCE 203
Query: 63 PNFSQSLNNLGVVYTVQGKMDAA 85
P+ + +NL + +DA+
Sbjct: 204 PDNMGAFDNLLIAMAFSPTVDAS 226
>gi|390949284|ref|YP_006413043.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
gi|390425853|gb|AFL72918.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
Length = 749
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/550 (35%), Positives = 308/550 (56%), Gaps = 9/550 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
LG A + + AI + A +P A A N+ GV KD + +++A+ CY+ AL++
Sbjct: 207 TLGNALNNLGRAREAIDCFNRALEIDPDYAAAHNSKGVALKDLNRMEEAIACYRRALALA 266
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ +++ NNLG + G++D A E +A+A NP YAEAY+NLG + G + +I A
Sbjct: 267 PDLAEAHNNLGAAFKGVGRLDEALECHRQALAINPRYAEAYSNLGGALQGLGRLDESIAA 326
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLY-SQYTSWDNTKD 181
YE+ L+++P A ++L +NY + ++++ A+RD+ +R+ + + + + DN +D
Sbjct: 327 YERSLQLNPKLIMAPSSQLFVLNYHPDKPAEEIYAAYRDFDRRYAEPHRASWRAHDNNRD 386
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P+R L +GYVSPD+ +HS +F+E L +HD + Y+ + DA T R+R V
Sbjct: 387 PDRRLRVGYVSPDFRSHSARHFLEPLLEWHDRGEIEATAYAELASEDAVTARYRGYVDH- 445
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
W G+ ++ +A +R D IDILV++ GHTANN+L + A +PAP+ ++W+GY TT
Sbjct: 446 ---WVATRGLSDEALAERIRADGIDILVDVAGHTANNRLSVFARRPAPISLSWMGYGYTT 502
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
GL IDY +TD + PP ++ E R+P L Y P+ G V PAL GF+TFG
Sbjct: 503 GLSAIDYFLTDDVMAPPGSENLFAERPWRIPVPSLAYRPAQGMGAVGALPALRRGFVTFG 562
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
+ +I ++++VW+ +L +P +RL++ + F + G+++ R++L
Sbjct: 563 TLTRGIRINHRIIRVWSELLQRLPGARLLIDSQDFVTPEAQIAISKRFAAHGIDTRRLEL 622
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ MDI LD FP+ TT ESLYMGVP +T+A +G +L
Sbjct: 623 ----GFHSPPWDVLRGMDIGLDCFPHNSGTTLIESLYMGVPFITLAERASVGRIGSMMLA 678
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
G IA +ED+Y++ A++LASD+T L +R LR + P D FA +E YR
Sbjct: 679 GAGHAEWIADSEDDYIEKAVELASDLTRLVAIRAGLRGELEAGPWRDEVGFARRVEMAYR 738
Query: 542 NMWHRYCKGD 551
MW R+C GD
Sbjct: 739 EMWRRWCLGD 748
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A LG + RD+ A+ Q ALSI P+ ++ LN LG G+ A +
Sbjct: 165 PSDAFGWRALGTLLFKRDDYQGALTMLQKALSIDPHHAECLNTLGNALNNLGRAREAIDC 224
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+A+ +P YA A+N+ GV +D + AI Y + L + PD A N L +
Sbjct: 225 FNRALEIDPDYAAAHNSKGVALKDLNRMEEAIACYRRALALAPDLAEAHNN--LGAAFKG 282
Query: 149 EGHDDKLFEAHR 160
G D+ E HR
Sbjct: 283 VGRLDEALECHR 294
>gi|392409193|ref|YP_006445800.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfomonile tiedjei DSM 6799]
gi|390622329|gb|AFM23536.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfomonile tiedjei DSM 6799]
Length = 583
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/547 (36%), Positives = 311/547 (56%), Gaps = 11/547 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG + + AI Y+ A + P A +NLG +D+AV + A+
Sbjct: 42 LMNLGALLRQRGRHIDAIGLYKHALTYEPKNASVLSNLGNALNQIGLVDEAVMVLKKAIE 101
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I PN + +NLG +Y+ + + D A E++E A+ NP A A NN+G ++ + +I
Sbjct: 102 IDPNHDLAHDNLGHIYSKRERYDQAKELLEMALKINPDNANALNNIGGVHLAQCRVEESI 161
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
Y + ++++P A N L MN+ + +++ HR W K+ S +
Sbjct: 162 RCYRKAVELNPHFIMAHSNVLFNMNFSPQYTAEEMAAEHRAWNKQHALPLSGEIVRHPPR 221
Query: 181 D-PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
D ++PL +G+VS D+ H V F+ + Q+++ V YS VV D +T R +
Sbjct: 222 DVTKKPLRVGFVSFDFQEHPVGRFLSPLFRARNRQSWEAVCYSDVVAPDRRTDWLRSQSD 281
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ WRD G+ + ++A ++ D+IDIL++L+GHT +N+L + A +PAPVQ +W+GY N
Sbjct: 282 Q----WRDTAGLTDPELAQGIQRDRIDILIDLSGHTGHNRLLVFARKPAPVQASWMGYFN 337
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYT--PSPEAGPVCPTPALTNGF 357
TTGL +DY I D + PPE + + E+++R+P+ FLCY P+P GP+ PAL+ GF
Sbjct: 338 TTGLDCMDYLIADRICVPPEHEHLYTEKIVRMPDGFLCYEVPPAPNVGPL---PALSRGF 394
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+TF SFN LAKI+ K L+ WA IL +P SRLV++ K ++R F L LG+
Sbjct: 395 VTFCSFNQLAKISDKALETWAEILGQLPRSRLVMRGKALNDATIRDSFAEKLSSLGISRD 454
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+DLLP HD+++ Y+ +DI+LDTFP+AG TTTC+SL+MGVP VT G H
Sbjct: 455 RMDLLPKTTF-HDYLRTYNDVDIALDTFPFAGGTTTCDSLWMGVPVVTFTGDRFCHRHSA 513
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S + G + L+A + + Y+ A+QLASD+ L+ +R S+R +S+SP+ D + FA
Sbjct: 514 SHIINSGHEDLVAHDIEGYIHKAIQLASDLDKLSKIRHSMRQKVSQSPLMDAKRFADNFR 573
Query: 538 STYRNMW 544
MW
Sbjct: 574 KCLEQMW 580
>gi|374999547|ref|YP_004975635.1| hypothetical protein AZOLI_p60052 [Azospirillum lipoferum 4B]
gi|357428518|emb|CBS91475.1| conserved protein of unknown function; putative TPR domains
[Azospirillum lipoferum 4B]
Length = 583
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/541 (36%), Positives = 295/541 (54%), Gaps = 9/541 (1%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A Y A+ NNLG + + + + + AL ++P++++ L
Sbjct: 35 RLEEAASLYRELLAGEGMAADLWNNLGFVLSELGRPAEGMAALRRALVLRPDYAKPWVGL 94
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTY-AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G ++D + +AI +P A + NLGV+ + G + A + Q ++ P
Sbjct: 95 GGDAYGNDRLDETVRLWSRAIQTDPNQEANLWFNLGVVRQMRGEAAAAALCFGQAERLAP 154
Query: 132 DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYV 191
RLL +NY+ E D+L HR + +RF R + N DPER L IGY+
Sbjct: 155 GDPRIASQRLLCLNYL-ELPGDRLLAEHRRFDERFGRPAVAPAAHANRPDPERRLRIGYL 213
Query: 192 SPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAV--VKADAKTIRFREKVMKKGGIWRDIY 249
S ++ H +YF+ D +++V YS + ADA T RF K G WR +
Sbjct: 214 SVEFREHLGAYFLTPLFEAADRSRFEIVCYSILPDTHADAYTARF--KAQADG--WRTVG 269
Query: 250 GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR 309
+D+ +A ++R D IDILV+L GH+ N+L M+A +PAPVQVTW+GYPN TG+ T+ YR
Sbjct: 270 HLDDTALAELIRTDGIDILVDLAGHSGLNRLPMLARRPAPVQVTWLGYPNGTGMETVGYR 329
Query: 310 ITDSLADPPETKQKH-VEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAK 368
I D ++DP + H VE L+RLP FLC+ P +A V P PA G +TFGSFN L+K
Sbjct: 330 IVDPVSDPVGSTDGHAVETLVRLPPPFLCFRPPTDAPAVVPLPAGATGHVTFGSFNKLSK 389
Query: 369 ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLN 428
IT +++WA +L VP+SRL++K +P + G+ R+DL+ I
Sbjct: 390 ITDHTVRLWAEVLRRVPDSRLLLKDRPLSDPGTAAGLRARFAAAGIAPDRLDLVGFIKDA 449
Query: 429 HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL 488
H+ AY+ +DI+LD PY GT TTC++L+MG P VT+AG HA VG SL+ +GL L
Sbjct: 450 AGHLAAYNRIDIALDPHPYNGTITTCDTLWMGAPLVTLAGGRHAARVGASLMASIGLPEL 509
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+A D Y +A +LA D+ L LRM +R+ + S +CD F LES YR MW R+C
Sbjct: 510 VAATPDRYAAIAAELAGDLGRLMRLRMGMRERVRTSALCDEARFMRNLESAYRLMWRRWC 569
Query: 549 K 549
+
Sbjct: 570 Q 570
>gi|440794163|gb|ELR15334.1| udpn-acetylglucosamine--peptide n-acetylglucosaminyltransferase
spindly, putative [Acanthamoeba castellanii str. Neff]
Length = 346
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/337 (53%), Positives = 233/337 (69%), Gaps = 29/337 (8%)
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP 318
M+ D+IDILV+LTGHTA N+L +MA +PAPVQVT+IGYPNTTGLPTIDYR D++ DP
Sbjct: 1 MIMADEIDILVDLTGHTAGNRLDVMALKPAPVQVTYIGYPNTTGLPTIDYRFADAVTDPL 60
Query: 319 ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWA 378
+++Q++VEEL+RLP CFLCYTPSP+AGPV P P NG+ITFGSFNNLAK
Sbjct: 61 DSQQRYVEELVRLPHCFLCYTPSPDAGPVAPAPCTKNGYITFGSFNNLAK---------- 110
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
R+V+KCKPF CD++R+ FL L+ G+E RVDLL LI LNHDH+QAYS M
Sbjct: 111 ---------RMVIKCKPFACDTIRNNFLRRLQDEGIEPARVDLLALIPLNHDHLQAYSYM 161
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
DISLDTFPYAGTTTTCE+L+MGVP +T+ G HAHNVG ++L +VG + LIA+ ++ YVQ
Sbjct: 162 DISLDTFPYAGTTTTCEALWMGVPVITLTGDNHAHNVGATILQQVGHEELIARTKESYVQ 221
Query: 499 LALQLASDVTALANLR--------MSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
AL+LASDV L +R +SLR+ M S +C+ + F LE TY +W ++C
Sbjct: 222 AALRLASDVQRLHAIRRYRIAIVSISLREKMQSSYLCNPREFTRNLEDTYSRLWRKHCLQ 281
Query: 551 DVPSLKRMEMLQQQVVSEEPSKFSEPT-KIIFAKEGS 586
V L ++ Q S EP+ + P K+ EG+
Sbjct: 282 HV-ELSAVDNQGQPAPSSEPNTTTGPAKKVKITTEGT 317
>gi|322421643|ref|YP_004200866.1| hypothetical protein GM18_4176 [Geobacter sp. M18]
gi|320128030|gb|ADW15590.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
M18]
Length = 598
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 203/546 (37%), Positives = 300/546 (54%), Gaps = 8/546 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y L V GE + A P +A N LG + + ++A+ CY+ AL I
Sbjct: 47 YLLAVLRGEDGSPEEAAELLARTLSLEPENVKALNALGAALQQLEQPEQALSCYREALRI 106
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP F ++ NL ++ + A ++ +P + NL + G A+
Sbjct: 107 KPGFLEARINLALLLKEALRFSEAELVLRDGTELHPDSVRLHYNLANVLHYQGRSLEAVA 166
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR--FMRLYSQYTSWDNT 179
AY + L++DPD +A QN L A++Y + ++ H G+ F Q
Sbjct: 167 AYRETLRLDPDHLDARQNLLFALHYSPQFSRRLIYLEHLKGGRSRPFRPAPEQRIPQKRP 226
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
R + IGY+SPD+ H+V+ FIE L HD +++ Y+ V + D T +++M
Sbjct: 227 ARGSR-IRIGYLSPDFREHAVASFIEPVLREHDRDRFEIFCYANVPRPDRTT----QRLM 281
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
WRDI+G+ + AA + +D IDILV+L GHT+ ++L + A +PAP+QVTWIGYP+
Sbjct: 282 GLAEQWRDIHGMADHNAAAQIAKDGIDILVDLAGHTSGSRLPVFAYRPAPLQVTWIGYPD 341
Query: 300 TTGLPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGL +DYRITD+LADPP + H E L+RLP F CY P +A + P P +G I
Sbjct: 342 TTGLKEMDYRITDALADPPGVDDRCHSERLVRLPRSFCCYLPPGDAPDLSPPPCTGSGRI 401
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGSFNNLAK+TP+V+ +W+R+L AVP S L++K KP VR R L G+ R
Sbjct: 402 TFGSFNNLAKVTPEVIALWSRVLQAVPGSLLLLKAKPLADQGVRRRILDLFAAGGVAGDR 461
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
++ P +H+ Y +D++LDTFPY GTTTTCE+L+MGVP +T+AG HA G S
Sbjct: 462 IEFDPGQPGIREHLAQYRRVDVALDTFPYNGTTTTCEALWMGVPIITLAGDRHASRTGAS 521
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
LLT GL L+ ++E +Y++ A Q+A D+ L R R+ + +SP+ D LE+
Sbjct: 522 LLTNCGLADLVTRSEAQYLETARQVAQDLALLQAFRAGARERLKRSPLLDAAGITRELET 581
Query: 539 TYRNMW 544
++
Sbjct: 582 ALAELF 587
>gi|398805153|ref|ZP_10564134.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
gi|398092315|gb|EJL82730.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
Length = 733
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 295/539 (54%), Gaps = 8/539 (1%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+FD A + +PH EA N+LG++ + +AV Y++A+ +KP+F + NL
Sbjct: 180 QFDEAAACFRRILVRDPHNVEALNSLGLLLNIKGQFHEAVSQYRLAVKLKPDFLAAHGNL 239
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G V + AA + + NP A+AYNNLG ++D G + A+ +Y + + + PD
Sbjct: 240 GNVLMDLHQFSDAAASYHRVLELNPDSADAYNNLGSAFKDLGDLDKALASYRKAMTLKPD 299
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVS 192
A N L+ NY++E +L E R +G+ RL DN+ P+R L IG VS
Sbjct: 300 LLVAHSNLLMVQNYLSEQPPQELVEEARRFGETAARLAPPVEPLDNSPMPDRCLRIGIVS 359
Query: 193 PDYFTHSVSYFIE---APLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIY 249
D H V YFIE A LV ++ Y+ ++D T R + + W +
Sbjct: 360 ADLSAHPVGYFIESILAALVAEAAGRLELFAYANSSQSDEVTARIKSHLQG----WHPAH 415
Query: 250 GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR 309
++ +A +R+D+IDIL++L+GHT N+L + +PAPVQ++W+GY TTG+P+IDY
Sbjct: 416 DQSDESLAQRIRDDRIDILIDLSGHTGGNRLPVFERRPAPVQISWLGYFATTGVPSIDYL 475
Query: 310 ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKI 369
+ D P + +Q E+++RLPE LC+TP P PAL NG++TF FN L K+
Sbjct: 476 VADPWTLPSQLEQHFTEKILRLPETRLCFTPPTLDLNTGPLPALANGYVTFACFNALPKM 535
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429
V+ +WARIL AVP SRL + S R L G+++ R+ L+ +
Sbjct: 536 GDAVVALWARILQAVPGSRLHLMASQLSEASTRQTTLERFMAHGIDATRL-LIQGPMPRI 594
Query: 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLI 489
++Q Y +DI+LD FPY G TTT E+L+MGVP +T+AG+ GV LL GL I
Sbjct: 595 KYLQTYQRVDIALDPFPYTGGTTTAEALWMGVPVLTLAGNTFLSRQGVGLLMNAGLSEWI 654
Query: 490 AKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
A + D+YV+ A+ A D+ L+ LR SLR + SP+ D FA E+ R +WHR+C
Sbjct: 655 ASDADDYVKRAVAHAGDLQKLSALRSSLRPQVMASPLFDAPRFARHFEAALRGVWHRWC 713
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G+A + + + A++ Y+ A P A A N G I DR + +A+E + A+ KP+
Sbjct: 36 GMALEQQGQPEEALLRYDSAIALMPELARAHFNRGTILLDRGDAQQALEAFTKAVQYKPD 95
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ + NLG Y+ + +AA +A++ P +AEA LG + G A+ +Y
Sbjct: 96 SAGAHFNLGAAYSRLDQHEAAMSAYRQALSLKPDFAEAEMALGAALEEQGRDEEAVRSYR 155
Query: 125 QCLKIDP 131
+ L+I P
Sbjct: 156 RALEIQP 162
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N G + A+ + A + P A A NLG Y D + A+ Y+ ALS+
Sbjct: 67 FNRGTILLDRGDAQQALEAFTKAVQYKPDSAGAHFNLGAAYSRLDQHEAAMSAYRQALSL 126
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+F+++ LG QG+ + A +A+ P YAEA + L A
Sbjct: 127 KPDFAEAEMALGAALEEQGRDEEAVRSYRRALEIQPGYAEAQDKLAYSLVRLDQFDEAAA 186
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
+ + L DP + A + L +N + H+
Sbjct: 187 CFRRILVRDPHNVEALNSLGLLLNIKGQFHE 217
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ +F A Y NP A+A NNLG +KD +LDKA+ Y+ A+++K
Sbjct: 238 NLGNVLMDLHQFSDAAASYHRVLELNPDSADAYNNLGSAFKDLGDLDKALASYRKAMTLK 297
Query: 63 PNFSQSLNNLGVV 75
P+ + +NL +V
Sbjct: 298 PDLLVAHSNLLMV 310
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 27 FNP-HCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA 85
NP AE G+ + + ++A+ Y A+++ P +++ N G + +G A
Sbjct: 23 LNPGRSAEQLLEQGMALEQQGQPEEALLRYDSAIALMPELARAHFNRGTILLDRGDAQQA 82
Query: 86 AEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145
E KA+ P A A+ NLG Y A+ AY Q L + PD A L
Sbjct: 83 LEAFTKAVQYKPDSAGAHFNLGAAYSRLDQHEAAMSAYRQALSLKPDFAEA--EMALGAA 140
Query: 146 YINEGHDDKLFEAHR 160
+G D++ ++R
Sbjct: 141 LEEQGRDEEAVRSYR 155
>gi|196233636|ref|ZP_03132477.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196222306|gb|EDY16835.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 752
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 296/553 (53%), Gaps = 21/553 (3%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+ + + D AI Y A NP AE NLG + LD+A ++ +
Sbjct: 213 LNNLGITLADAGRLDEAIACYRRALQINPAGAETNTNLGNALFELQRLDEAAAAFRAVIE 272
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KP+ +Q+ NNLG QG ++ A+ A+A P A+ +NNLG +D G I A+
Sbjct: 273 LKPDLAQAYNNLGNALREQGALNEASAEFLHALAIEPNSADFHNNLGNALKDRGEIDAAL 332
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTS-WDNT 179
DAY + +++ PD N + + + D L EA W RF + N
Sbjct: 333 DAYRRAMELAPDDSGPWTNFVYTLLFQPRVDDRALIEARAQWSNRFADPLRPFIRPHTND 392
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
+ PER L IGYVSP++ H V + +HD+ +++ Y V+ D+ F E++
Sbjct: 393 RSPERRLRIGYVSPNFRRHVVGVNLLPLFRHHDHTAFEIYCYDNGVRVDS----FHEEIR 448
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ WR G+ ++ +A M+R+D +DILV+LT H A N+L ++A +PAPVQV++ GYP
Sbjct: 449 RGADHWRSSVGVSDEALAEMIRQDGVDILVDLTQHMAGNRLQVLARRPAPVQVSFAGYPE 508
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TTGL IDYRI+D D + + V + + F CY P+ + V + A NG +T
Sbjct: 509 TTGLEAIDYRISDRFLDVGAPRHEQVVHI----DSFWCYAPAGDIIEVSDSSAKQNGIVT 564
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FGS NN K+ +LQ+WAR+L V SRLV+ + R R L L + G++ R+
Sbjct: 565 FGSLNNFCKVNDPMLQLWARVLRGVKGSRLVLLSH---AGTHRQRTLDILTEAGIDPSRI 621
Query: 420 DLLPLILLNH----DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
+ H +++ Y +D+ LD FPY G TT+ ++L+MGVP VT+AG
Sbjct: 622 EFA-----THRPRPKYLELYRHLDVVLDPFPYNGHTTSLDALWMGVPVVTLAGKTAVSRA 676
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
G+S L+ +GL L+A D+YV A+QLA D+ LA LR +LR M S + D FA
Sbjct: 677 GLSQLSNLGLPELVAFTGDDYVAKAIQLAHDLPRLAELRRTLRGRMEASVLMDAPRFARN 736
Query: 536 LESTYRNMWHRYC 548
+E+ YR MW ++C
Sbjct: 737 IENAYRTMWQKWC 749
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG A E+ + + A + A P A+A +NLG R D+A+ +Q A+ +
Sbjct: 78 FNLGNALSELGRMEEAADAFGRATELQPDYAQAHHNLGSALAKRGRFDEAIAAFQRAIEL 137
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+++ + NNLG+ Q + D A ++AIA P +AEA+ NLG ++R+ A+
Sbjct: 138 KPDYASAYNNLGLALKAQARRDEALAAFQQAIALQPDHAEAHFNLGNIFREWARPQEAMT 197
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
A+ + L+I+PD +A N L + + G D+ +R
Sbjct: 198 AFRRALEINPDYADALNN--LGITLADAGRLDEAIACYR 234
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 74/130 (56%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG A + +FD AI ++ A P A A NNLG+ K + D+A+ +Q A+++
Sbjct: 112 HNLGSALAKRGRFDEAIAAFQRAIELKPDYASAYNNLGLALKAQARRDEALAAFQQAIAL 171
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P+ +++ NLG ++ + A +A+ NP YA+A NNLG+ DAG + AI
Sbjct: 172 QPDHAEAHFNLGNIFREWARPQEAMTAFRRALEINPDYADALNNLGITLADAGRLDEAIA 231
Query: 122 AYEQCLKIDP 131
Y + L+I+P
Sbjct: 232 CYRRALQINP 241
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV + ++A+ + A + P A NLG + +++A + + A
Sbjct: 43 LHLLGVVAHRSGRPEIAVELIQQALNAAPQHVAAHFNLGNALSELGRMEEAADAFGRATE 102
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P+++Q+ +NLG +G+ D A ++AI P YA AYNNLG+ + A+
Sbjct: 103 LQPDYAQAHHNLGSALAKRGRFDEAIAAFQRAIELKPDYASAYNNLGLALKAQARRDEAL 162
Query: 121 DAYEQCLKIDPDSRNAGQN 139
A++Q + + PD A N
Sbjct: 163 AAFQQAIALQPDHAEAHFN 181
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ L + + + + A Y + P +A + LGV+ + AVE Q AL+
Sbjct: 10 FELALQHHQAGRLPEAEALYRQILNAQPGQPDALHLLGVVAHRSGRPEIAVELIQQALNA 69
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P + NLG + G+M+ AA+ +A P YA+A++NLG G AI
Sbjct: 70 APQHVAAHFNLGNALSELGRMEEAADAFGRATELQPDYAQAHHNLGSALAKRGRFDEAIA 129
Query: 122 AYEQCLKIDPDSRNAGQNRLLAM 144
A+++ +++ PD +A N LA+
Sbjct: 130 AFQRAIELKPDYASAYNNLGLAL 152
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A L + + L +A Y+ L+ +P +L+ LGVV G+ + A E+I++A+
Sbjct: 8 AAFELALQHHQAGRLPEAEALYRQILNAQPGQPDALHLLGVVAHRSGRPEIAVELIQQAL 67
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A P + A+ NLG + G + A DA+ + ++ PD A N
Sbjct: 68 NAAPQHVAAHFNLGNALSELGRMEEAADAFGRATELQPDYAQAHHN 113
>gi|189425152|ref|YP_001952329.1| hypothetical protein Glov_2093 [Geobacter lovleyi SZ]
gi|189421411|gb|ACD95809.1| TPR repeat-containing protein [Geobacter lovleyi SZ]
Length = 1714
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 194/530 (36%), Positives = 306/530 (57%), Gaps = 28/530 (5%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A+ C G ++R+N + + ++ A+++ N + N+LG+VY+ G+++ A E +K
Sbjct: 1195 AQLCTQQGNFTRERNNPLSSQKLFKKAIALDKNNFIAHNSLGLVYSSLGQLNKAFECFDK 1254
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
A+ YAEA+NN L G++S A +Y++ + P+ + N+LL MNY +
Sbjct: 1255 ALEIEDRYAEAWNNKASLQMVCGNMSEASKSYDKAYALQPERLHIRSNQLLFMNYTPKVT 1314
Query: 152 DDKLFEAHRDWGKRFMRLYSQYTSWDNT---------KD---PERPLVIGYVSPDYFTHS 199
++ + W QY W + +D PE+ L IG+VSPD+ HS
Sbjct: 1315 QEEYYTRSVAW--------KQYIGWQASALDYNDLLVQDAVVPEK-LRIGFVSPDFRKHS 1365
Query: 200 VSYFIEAPLVYH-DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
V+YF+ PL H D + Y++V +S V+K D T R + + W +++GI +++
Sbjct: 1366 VAYFL-GPLFSHLDKKKYEIVCFSDVIKNDQVTNRLQSYADE----WHEVFGIVHQELFE 1420
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP 318
+++E+ + IL +L GHT+ N+L + A +P+P+QV+W+GYPNTTGL IDYR TD +ADP
Sbjct: 1421 VIKENHVHILFDLAGHTSRNRLEVFAAKPSPIQVSWLGYPNTTGLTEIDYRFTDDIADPV 1480
Query: 319 ETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
+ + + E+L+RL E FLCY P EA V P + G +TFGSFNN++K +P V++ W
Sbjct: 1481 DGDDRWYTEKLVRLSEGFLCYEPPKEAPNVTDFPCIRKGCVTFGSFNNISKTSPYVIETW 1540
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
A IL V S +++K F S++ +F G+ S R+ LLP +H+ Y
Sbjct: 1541 ATILNRVEGSVIMLKNWFFSDQSIQQKFYDGFAAFGITSDRIILLPAAPDIKEHLCMYQH 1600
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
+DI+LDTFPY GTTTTCE+L+MGVP VT G HA VG S+L ++GL L+A++ ++Y+
Sbjct: 1601 VDIALDTFPYNGTTTTCEALWMGVPVVTFTGDRHAGRVGASILNRIGLSELVARDRNDYI 1660
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
A+ LA ++ N R S+R+ S + DG+ FA ES +W Y
Sbjct: 1661 DRAVMLAENICQRPNFRQSIRECFINSSLFDGELFARSFESALDKIWSDY 1710
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 289/552 (52%), Gaps = 10/552 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ +G+ +F++ A P A+A NLGVI +++ + Y+ L
Sbjct: 51 LHAMGMLRYRTGEFEVGEQLIREAIKLKPGYADALQNLGVILSGMLLFEESEQLYRQVLK 110
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P ++++ L V +G+ + A E KA+ P A Y NLG L G A
Sbjct: 111 LAPENAKTMALLASVLITKGETEEAQEFCTKALQLCPDIALNYQNLGSLMLSFGKPEEAY 170
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWG-KRFMRLYSQYTSWDNT 179
+ +K+ + + L MN + E +++ K + + N+
Sbjct: 171 TYFSHGVKLRA-TDALISSVLFTMNLLPEFSQQDIYQKTVQLAQKNYDNQNRSNRGYLNS 229
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
ER + +GYVS D+ H V Y+++ L+ HD +++ +Y++ D T E +
Sbjct: 230 VCRERKIRVGYVSGDFKLHPVVYYLKPLLLNHDKDTFEIYLYNSFPLRDEVT----ETLA 285
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
RDIY + + + A ++R D IDILV+L GHT N+LG+ A +PAPVQVTW+GY N
Sbjct: 286 GNVAAMRDIYNLSDTQAAKLIRCDCIDILVDLAGHTGFNRLGLFAQKPAPVQVTWLGYFN 345
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TTGL +IDY I+D + P + E+++RLP C CY P P P P L NG+IT
Sbjct: 346 TTGLESIDYLISDPITIPLKDDLFFAEQIVRLPVCRFCYEPMPYTPPTTAAPCLKNGYIT 405
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FGSFN++ K+T +V+ W+R+L AV +S+L++K K F D V F+ + G+ S R+
Sbjct: 406 FGSFNSIHKLTAEVVDAWSRVLHAVSHSKLLLKSKSFSDDVVVDDFIRRFKIHGISSNRI 465
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+ + +++ +Q Y +DI+LD FPY G +TCE+L+MGVP VT+ +
Sbjct: 466 -IFKKLSSHYEMLQEYGEIDIALDPFPYNGGASTCEALWMGVPVVTLEMGTPISRQSKAF 524
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L + L+A D+YVQ+A LA D L+ +R +LR M+ SP+CDG FA +E+
Sbjct: 525 LYAIDHHELVASTLDDYVQIAQNLALDPNRLSLMRRNLRREMASSPLCDGLAFAKNMETL 584
Query: 540 YRNM---WHRYC 548
Y+ + W C
Sbjct: 585 YKEILENWQTNC 596
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 281/549 (51%), Gaps = 22/549 (4%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L AY ++ + + AI Y P E+ LG++Y A + L + P
Sbjct: 647 LAGAYKKLGQLEKAISMYRAGVRRYPKRFESRLQLGILYLSVARHQLARKHLLKVLELCP 706
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ +L NLG+V + ++ + E+A+ P + A NL + G IS A+
Sbjct: 707 ENTHALVNLGIVNRILDRIHDSVVCCERALELAPDHLGAIGNLALAQGAMGDISKAVQTL 766
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE 183
++ ++I P + + + Y +FE R + L ++ S + +
Sbjct: 767 KRGVEISPFNYEMLTTLMSFLFYDATAKQSDVFELSRQVAD-VLELDAEPWSDCLPRKKK 825
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
+ L +G+VSPD+ H V + A ++ + + YS + D T ++EK
Sbjct: 826 KLLRVGFVSPDFCHHPVGILLLALFQNYNSERLSLFCYSNGSRHDQITDSYQEK----AA 881
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
IWRDI + ++ A ++R DKIDIL++L GHT +++ + +PA +Q+TW+GY +TTGL
Sbjct: 882 IWRDITALSDQDAAEIIRNDKIDILIDLAGHTVKSRIQIFCFRPATIQMTWMGYGHTTGL 941
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPE---CFLCYTPSPEAGPVCPTPALTNGFITF 360
+IDY I D+ P+ +Q VE ++ LP CF+ +PSPE V +P L + FITF
Sbjct: 942 DSIDYIIADNDFIQPQDEQWFVERVVCLPYSRFCFVQPSPSPE---VVESPCLDSEFITF 998
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNN KI+ V++VW+ I+ VP SRLV+K F SVR RF G+ R++
Sbjct: 999 GSFNNPLKISENVVEVWSDIMKRVPKSRLVLKFSTFKDVSVRRRFRELFSTYGVSPRRIE 1058
Query: 421 LLP-----LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
L+L+ H +DI LDTFP+ G T+ +L+MGVP +T+AG+
Sbjct: 1059 FRTFSSPYLMLMEHGD------IDIMLDTFPFTGGMTSLNALWMGVPIITLAGTTPISRQ 1112
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
+ L +GL L+ N+DEY++ A++L+ D+ L R SLR + SP+CDG+ FA
Sbjct: 1113 TKTFLDLLGLYELVTTNKDEYIETAVKLSFDLEKLQFFRDSLRPALLNSPLCDGRRFAHD 1172
Query: 536 LESTYRNMW 544
+E +W
Sbjct: 1173 VEELLFQLW 1181
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
C +++++ N + L+ +G++ G+ + ++I +AI P YA+A NLGV+
Sbjct: 37 CEELSVAFHDN-PRILHAMGMLRYRTGEFEVGEQLIREAIKLKPGYADALQNLGVILSGM 95
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
+ Y Q LK+ P+ NA LLA I +G ++
Sbjct: 96 LLFEESEQLYRQVLKLAPE--NAKTMALLASVLITKGETEE 134
>gi|392377847|ref|YP_004985006.1| conserved protein of unknown function; putative TPR domains
[Azospirillum brasilense Sp245]
gi|356879328|emb|CCD00240.1| conserved protein of unknown function; putative TPR domains
[Azospirillum brasilense Sp245]
Length = 634
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 211/547 (38%), Positives = 313/547 (57%), Gaps = 6/547 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A ++ + A+ +A +P A+A N G + K ++A+ Y+ A+ ++
Sbjct: 81 NLSCALADLGRPAEALAAVRVALSLSPDYADAWFNAGNLLKTERQPERAIAAYRRAVRLR 140
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +N+G V+ G+ A + A+ A P + NLG ++ G I+ AI
Sbjct: 141 PGMGGAHSNMGDVHRDLGESSRAVDCYRMAMQAQPDLPQPVVNLGEALKEQGRITEAIAV 200
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKD 181
++ ++ PD N L A++Y + + AH W +R R L + N ++
Sbjct: 201 FQSGVERHPDLALLHSNLLFALHYTPWVPPEVIARAHAHWNERHARPLMPLDRGFLNDRN 260
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P R L +GYVSPD+ H+ ++FIE L HD +V Y+ DA T R R +
Sbjct: 261 PGRRLRVGYVSPDFRAHACAHFIEPLLREHDRGAVEVFCYATSNHHDAITERMRS--LAD 318
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
G WR + +D+ AA+V D+IDILV+L GHTA+++ + A +PAP+QV W+GYP+T
Sbjct: 319 G--WRSLTALDDTAAAALVERDRIDILVDLAGHTAHSRPLLFARKPAPIQVAWLGYPDTA 376
Query: 302 GLPTIDYRITDSLADPPE-TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
G+ ID+R+TD++ADPP T H E L+RLP+ FL + P PAL NGF+TF
Sbjct: 377 GMTAIDHRLTDAVADPPGLTDAWHAERLVRLPKGFLAFQPLRFVTGRDEPPALVNGFVTF 436
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNN AK+TP+V++VW+ IL VP++RL +K + F R R+L G++ RVD
Sbjct: 437 GSFNNAAKVTPEVMRVWSAILARVPSARLCLKSRAFGDAPTRERYLRQFAGNGVDPGRVD 496
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LLP + + H+QAY +DI LD FPY GTTTTCE+L+MGVP +T+AG H VG SLL
Sbjct: 497 LLPPMDVIDHHLQAYDRIDIGLDPFPYNGTTTTCEALWMGVPVITLAGRHHVARVGASLL 556
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T+ GL IA +E Y++ A+ LA D L LR +R+ M +S + D + FA +E+ Y
Sbjct: 557 TQCGLAEFIATDEAGYMETAVALAGDTGRLTALRRGMRERMERSALSDHRGFAAAVEAAY 616
Query: 541 RNMWHRY 547
R MWH +
Sbjct: 617 RAMWHSW 623
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A Y+ L P + + NNL ++ G+ + AA +A+AA P A +NL
Sbjct: 27 AEAAYRAILRDDPGHAHANNNLAILLRGTGRWEEAAACYRRAVAALPDDASIRSNLSCAL 86
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
D G + A+ A L + PD +A N
Sbjct: 87 ADLGRPAEALAAVRVALSLSPDYADAWFN 115
>gi|118581731|ref|YP_902981.1| hypothetical protein Ppro_3331 [Pelobacter propionicus DSM 2379]
gi|118504441|gb|ABL00924.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
2379]
Length = 633
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 201/542 (37%), Positives = 303/542 (55%), Gaps = 11/542 (2%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + F+ +P A LG D + +A + A +KP+ +++ L
Sbjct: 94 RLNAVTAFFRKRVGDDPRDCAAWLYLGQACLDMGDKAQAGQALLRATRLKPDDAKAHYQL 153
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+ + M A + A+ +P N L + G A+D Y Q L +
Sbjct: 154 AMYHNDCCHMAEAERSLRNAVQLDPQSHHYCNWLAGFLKGLGRADEAVDWYLQALTLSDQ 213
Query: 133 SRNAGQNRLLAMNYI-NEGHD-DKLFEAHRDWGKRFMRLYSQ-YTSWDNTKDPERPLVIG 189
+ N L MN++ G+ D + H W ++ R + + ++N DPER L I
Sbjct: 214 NEAYFSNYL--MNFLCTTGYPPDFVSREHLRWAEKCCRAAGEPWCQFENEPDPERRLRIA 271
Query: 190 YVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIY 249
YVS D+++H V++FIE L HD + V ++S V K D T +FR++ WR I
Sbjct: 272 YVSSDFYSHPVAFFIEPLLTLHDQHDVDVYIFSNVEKEDYITEQFRQR----SCTWRQIR 327
Query: 250 GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR 309
G++ V M+RE++IDILV+L GHT N+L + A +PAPVQVTW+GY NTTGLPT+DYR
Sbjct: 328 GVNNMDVCRMIREERIDILVDLGGHTRRNRLPIFAKKPAPVQVTWLGYANTTGLPTMDYR 387
Query: 310 ITDSLADPPE-TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAK 368
ITD++ADPP T+ ++ E+L RLP F+CY P ++ + P P L G +TF ++NN AK
Sbjct: 388 ITDAVADPPGMTESQYSEQLFRLPGSFICYHPPLDSPGLSPLPLLERGAVTFVAYNNFAK 447
Query: 369 ITPKVLQVWARILCAVPNSRLVVKCKPFCCD-SVRHRFLSTLEQLGLESLRVDLLPLILL 427
+ +L +W R+L +P SRL +K + D R L Q G+ + R+ +
Sbjct: 448 LNCPLLDLWCRVLRMIPGSRLALKDRALANDVEFRMEMLDLFAQRGITADRLIIRDRTET 507
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH 487
H H+ A + DI+LD+ PY+GTTTTCESL+MGVP VT+AG HA V SLLT VG+
Sbjct: 508 VHAHLDALAEGDIALDSHPYSGTTTTCESLWMGVPVVTLAGGTHASRVSASLLTSVGVPE 567
Query: 488 LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
L+A+++D++V +A+ LA D L + R +LR++M S + D Q FA +ES YR MW ++
Sbjct: 568 LVAESDDDFVAIAVALAKDTDRLQHYRWNLREMMLNSSLMDLQGFARQMESAYRQMWRKW 627
Query: 548 CK 549
C+
Sbjct: 628 CQ 629
>gi|189426418|ref|YP_001953595.1| hypothetical protein Glov_3369 [Geobacter lovleyi SZ]
gi|189422677|gb|ACD97075.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
Length = 667
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 211/594 (35%), Positives = 304/594 (51%), Gaps = 58/594 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL +A E+ F+ A+ ++ A N GV+ + + ++ A ++ AL+I
Sbjct: 81 NLALALQELGCFEEALAAFDEAEALGETTVNLYYNRGVLLQRLERMEPARHAFEQALAID 140
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P S NL V D A + + NL ++Y ++
Sbjct: 141 PQHLNSWINLTAVCLASDDNDGALHSCRHGLHLDSDNVALIGNLAIVYGKMFRFEESLAC 200
Query: 123 YEQCLK-IDPDSRNA--------------------------------------GQNRLLA 143
Y++ L+ + PD R RL
Sbjct: 201 YQRVLELVRPDERAELLGSTANCLSELWMVDDAIACFDLAIASSNHLFQKRALASTRLFM 260
Query: 144 MNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++Y + H++WG+++ + + N DP+RP+ + Y+SPD H+V +F
Sbjct: 261 LHYSANWSAAAIAAEHKNWGQQYFEPVAM-KHFANDPDPDRPIRVAYLSPDLKIHAVVFF 319
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
++ L HD V YS V K D T + +E+ IWRD +D+ V ++ +D
Sbjct: 320 LQPVLAAHDPAQVTVYCYSDVKKPDVVTRQLKEQ---HHVIWRDCSAMDDASVQELLLQD 376
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE-TKQ 322
+ID+LV+L GHTA N+L + A + AP+QV+WIGYPN+TGL +DYRI+D+ ADPP T
Sbjct: 377 QIDVLVDLAGHTALNRLPLFAGRAAPLQVSWIGYPNSTGLMEMDYRISDAWADPPGVTDP 436
Query: 323 KHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILC 382
H EELIRLP+ FLCY P + V P TNG++TFGSF+N K+TP +L +WARIL
Sbjct: 437 FHTEELIRLPDSFLCYRPGADFPAVGSLPCQTNGYVTFGSFSNFKKVTPDILDLWARILA 496
Query: 383 AVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP--LILLNH-----DHMQAY 435
VP+S LV + + D RF+ + L LR + P + +L H ++++ Y
Sbjct: 497 KVPDSHLVFRARGLSHD----RFVRDIAPL---FLRHQVAPERISVLGHARSVVENLEGY 549
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+DI+LDTFPY GTTTTCE+L MGVP VT AG H VGVSLL VGL LI + +E
Sbjct: 550 HTIDIALDTFPYHGTTTTCEALCMGVPVVTRAGDSHVSRVGVSLLHSVGLPELIGNSPEE 609
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
Y LA+ LA+D LA LR SLRD + SP+ D F LE YR +W R+CK
Sbjct: 610 YCSLAVALAADTVRLAALRSSLRDRLLASPLADNSTFTCHLEGVYRQIWQRWCK 663
>gi|196231119|ref|ZP_03129979.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196224949|gb|EDY19459.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 600
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/549 (35%), Positives = 298/549 (54%), Gaps = 12/549 (2%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+ + D AI + + A +P NNLG + +D+ L +A+ CY+ A+ + P
Sbjct: 46 LGLVAHQRGALDSAIEWQQRAIAVHPTAPSFHNNLGNVLQDQGRLAEAIACYRRAVELGP 105
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+Q LNNLG T G ++ AA + E+AI +P+ EAY NL V + G + AI Y
Sbjct: 106 QLAQPLNNLGAALTAHGSLEEAAAVCEQAIRLDPSMPEAYTNLAVALQGLGKLEDAIALY 165
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKDP 182
+ + N L A+ Y +L H + +R+ R L S + +++DP
Sbjct: 166 QLAADLPNHFPGLADNYLAALQYRPGITLRQLHAMHLIYEERYARGLRSAWQPHADSRDP 225
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
R L +G++SP + +H V FI D ++VV Y+ + DA T R R V +
Sbjct: 226 GRVLRLGFISPHFHSHPVGRFIVRLFENLDRARFQVVCYTDTTRTDAMTERLRAAVAE-- 283
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
W D+ + ++ +A+ VR D+IDIL +L GHT N+L ++A +PAPVQ+TW+ Y TTG
Sbjct: 284 --WNDVRLLSDEALASRVRGDRIDILFDLAGHTPGNRLLVLARKPAPVQITWLDYVGTTG 341
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
L IDY + D P E + E+++RLP+ ++C+ P EA PV P PA NGFITF S
Sbjct: 342 LSAIDYILADPRQIPEEAGPWYSEKVLRLPDDYICFDPPAEAPPVGPLPAAANGFITFAS 401
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN ++K + + +W+RIL +P SRL++K K F ++ Q ++ R++
Sbjct: 402 FNIVSKTSGPTIALWSRILRRLPTSRLIIKNKGFEGARLQADIHQLFAQESVDPARIEFR 461
Query: 423 ---PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
P + + +Y DI+LDTFPY G TTCE+L+MG+P V+ AG A G++
Sbjct: 462 GPSP----QAEFLASYGDADIALDTFPYNGGLTTCEALWMGLPVVSCAGETFAGRHGLAH 517
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
LT GL +A + D YV LA+ LASD+ L+ +R LR ++ SP+CDG FA +
Sbjct: 518 LTAAGLPEWVAADFDAYVDLAVALASDLDHLSQVRAGLRARVAASPLCDGPRFAGNFATL 577
Query: 540 YRNMWHRYC 548
W R+C
Sbjct: 578 METAWQRWC 586
>gi|392377489|ref|YP_004984648.1| TPR repeat-containing protein [Azospirillum brasilense Sp245]
gi|356878970|emb|CCC99864.1| TPR repeat-containing protein [Azospirillum brasilense Sp245]
Length = 652
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 203/548 (37%), Positives = 295/548 (53%), Gaps = 13/548 (2%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LG + + + ++ Y A P EA NNLG ++ + D AV + A+
Sbjct: 112 FRLGNLFRLQRRPNESVAAYRQAIALQPGFVEALNNLGSLFLEVGQTDAAVAAFTDAIQA 171
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P +QS NLG +Q ++ AA A+A P +A A++NLG + + G + AI
Sbjct: 172 APANAQSHGNLGYALDLQDRLGEAAAAHRVALAFQPDFALAWSNLGNVLKGQGHLEQAIA 231
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
AY L PD A N L+A +Y+ E + A RDW +R
Sbjct: 232 AYRSALTHRPDFPMAHSNVLMAQHYLPECGNADFLAAARDWAERGGGELPVAAPVVRDDQ 291
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P RPL IGYVS D+ +H V YF+E+ L HD + Y+ + D T E +
Sbjct: 292 P-RPLRIGYVSSDFNSHPVGYFLESVLRAHDRKAVTAYGYANNGRTDDVT----ESLRAA 346
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
WR I G+ + VA ++R D IDILV+L+GHT NN+L + A +PAPVQV+W+GY TT
Sbjct: 347 ADGWRPIVGMGDAAVADLIRRDGIDILVDLSGHTGNNRLTLFARRPAPVQVSWLGYFGTT 406
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
GLP +D+ I D PP ++ E++ RLPE +LC+TP E V P PAL+ G +T G
Sbjct: 407 GLPAMDWIIADRHVLPPGEERFFTEKVWRLPESYLCFTPPAEEVAVGPLPALSGGSVTLG 466
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
+F+N AKIT + +WA++L A+P +RL++K + F VR R G+ R+ +
Sbjct: 467 AFHNRAKITRPTVALWAQVLTALPQARLLLKSREFADYGVRQRLRDQFAAHGIAPNRLRM 526
Query: 422 ---LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
P D+ + + +D++L FP+ G TTT ESL+MGVP VT+ G A +GVS
Sbjct: 527 EGKTP----RADYFNSLNRIDLALSPFPFGGGTTTAESLWMGVPVVTLRGDRWAGRIGVS 582
Query: 479 LLTKVGL-KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
L +GL + L+A + ++YV L D+ ALA LR LR+ + +SP+CD FA LE
Sbjct: 583 FLETLGLAEQLVADSPEDYVAKTAALVGDLEALAALRAGLRERVRQSPLCDAPAFARSLE 642
Query: 538 STYRNMWH 545
YR+MW
Sbjct: 643 EAYRSMWR 650
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 33/152 (21%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLN-- 70
+ D A Y P A+A + LGV+ +R + D + + ALSI+ LN
Sbjct: 22 RGDEAERTYRQILKREPRNADAWHLLGVLQSERGDHDAGIASIRTALSIREALEYHLNLA 81
Query: 71 -------------------------------NLGVVYTVQGKMDAAAEMIEKAIAANPTY 99
LG ++ +Q + + + +AIA P +
Sbjct: 82 SALLDSGRVDEALGALMAALRLEPDRADIHFRLGNLFRLQRRPNESVAAYRQAIALQPGF 141
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
EA NNLG L+ + G A+ A+ ++ P
Sbjct: 142 VEALNNLGSLFLEVGQTDAAVAAFTDAIQAAP 173
>gi|440683084|ref|YP_007157879.1| methyltransferase FkbM family [Anabaena cylindrica PCC 7122]
gi|428680203|gb|AFZ58969.1| methyltransferase FkbM family [Anabaena cylindrica PCC 7122]
Length = 1200
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/549 (35%), Positives = 305/549 (55%), Gaps = 20/549 (3%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K++ A ++ +P C NLG + +++ +A+ Y AL I N +L NL
Sbjct: 41 KWEQAKNCFKSVIELDPDCVLGHYNLGCVLQNQKYYPEAIFSYHRALKINANHIDALKNL 100
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G VY G+ D A + +K + NP +AE Y LG + + G +S I + LKI+P+
Sbjct: 101 GYVYYKNGQGDLAEKCFQKILQLNPNHAETYEILGFIAGEQGKLSECISLLNEALKINPN 160
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQY----TSWDNTKDPERPLVI 188
+ L ++ + ++ ++ + W ++ ++ +Q+ T+ N K P R L I
Sbjct: 161 NPKLHSCFLFNLSSLISFTPQQILDSTQLWYEQ--QVVNQWLPTLTTNRNDKTPHRRLRI 218
Query: 189 GYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDI 248
GY+SPD+ HSVS FI+ +HD +V Y V + DA T ++++ WR
Sbjct: 219 GYISPDFRRHSVSTFIKPIFQHHDRTQVEVFCYGEVNEPDAIT----DEIIDICDAWRST 274
Query: 249 YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDY 308
G+ + +VA +++ D IDILV+L GHTANN++ ++ +PAP+Q T++GY TTGLPTIDY
Sbjct: 275 VGLSDLQVAELIQTDHIDILVDLAGHTANNRMIVLGIKPAPIQTTYLGYFATTGLPTIDY 334
Query: 309 RITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAK 368
ITD + P +T++K E + RLP C++ Y P A V P G TF SFNNL K
Sbjct: 335 WITDEVLHPHDTQEKTSETIWRLPRCYVGYEPLKNAPEVTELPCKKTGIFTFSSFNNLRK 394
Query: 369 ITPKVLQVWARILCAVPNSRLVVKC------KPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
+TP+ +W IL AVPNSRLV+KC P + ++ F+ + G++ R+ L
Sbjct: 395 LTPETFALWIEILKAVPNSRLVLKCASSDVFSPLIAEKIQTPFV----EQGIDPKRIFLY 450
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ DH+ Y+ +D+ LD+ PY G TTTCE+L+MGVP +T+AG+ + S+L
Sbjct: 451 GGYAADEDHLNLYNQVDLHLDSLPYTGCTTTCEALWMGVPTITVAGTRKMERMSASILHS 510
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
VGL IA + EYV+ A+ LA + L +LR ++R+ + SP+ D +N LE+ YR
Sbjct: 511 VGLDDCIAYSAVEYVEKAIALARNPDYLQSLRSTMRERVQHSPLLDVKNMTSTLEAAYRQ 570
Query: 543 MWHRYCKGD 551
MW Y + +
Sbjct: 571 MWQIYIEQE 579
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%)
Query: 12 LKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNN 71
L+F A+ +Y+ NP+ A+A LG Y+ D+++ A+ Y +L+I + + +
Sbjct: 598 LEFADAVNYYQQYLENNPNDAQAYYYLGQAYQGLDDVENAIPSYLQSLAINRSSAATYQA 657
Query: 72 LGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
LG + Q +D A + A+ P +E NL +
Sbjct: 658 LGQLLAEQELIDQAEKYYRCAVLVEPNNSEIQQNLKLF 695
>gi|390949282|ref|YP_006413041.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
gi|390425851|gb|AFL72916.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
Length = 883
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/548 (36%), Positives = 295/548 (53%), Gaps = 13/548 (2%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVI--YKDRDNLDKAVECYQMALSI 61
LG+A ++ +FD A+ Y+ A P A N G+ Y RD D A+ C+ ALSI
Sbjct: 342 LGLALSDVGRFDEALTCYKHALAIAPDSVPAYVNQGISMHYLGRD--DTALACFDQALSI 399
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+ ++ +N G+V G+ + A + +A+ P +A A NN G + +D + AI
Sbjct: 400 DPDAIEAWSNRGIVMQHLGRKEEALTALNRALEIKPDFAMALNNRGNVLKDQDRLDDAIA 459
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ-YTSWDNTK 180
Y + + I PD A N L +NY + ++F A+RD+ +R+ + + + N +
Sbjct: 460 DYMKAVDIKPDFAVAYSNALFVLNYHPDKPAGEIFAAYRDFNRRYCEPHRVVWRAHANDR 519
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPER L +GYVS DY HS YF+E L HD ++ YS V++ D T RFR+ +
Sbjct: 520 DPERRLRVGYVSADYRGHSAHYFLEPLLANHDKGIVEITAYSQVLREDVVTTRFRDDADR 579
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W G+ + +A +R D+IDILV+L GHT N+L + A +PAPV ++W+GY T
Sbjct: 580 ----WVKTLGMSDSALAERIRADRIDILVDLAGHTGGNRLEVFARRPAPVSLSWMGYGYT 635
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGL IDY +TD + PP ++ E+ R+ L Y P+P+ G V P PAL G +TF
Sbjct: 636 TGLTAIDYFLTDEVMAPPGSEALFAEQPWRIAVPSLVYRPAPDMGAVSPLPALARGHVTF 695
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G+ +I + ++VW+ IL +P +RLV+ K F S++ + G+ + R+
Sbjct: 696 GTLTRSIRINHRTVRVWSAILDRLPAARLVIDSKDFTTVSMQRALAARFATHGIAAERL- 754
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
I + DI LD FP+ TT ESLYMGVP VT+AG +G +L
Sbjct: 755 ---AIGYSSPPWGVLRSTDIGLDCFPHNSGTTLIESLYMGVPYVTLAGRPSVGRIGGMML 811
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T GL+ IA +EDEY++ A+ LASD+ LA LR LR + P D FA +E+ Y
Sbjct: 812 TGAGLEDWIAVSEDEYIEKAVALASDLERLATLRSGLRARLEAGPWRDEAGFARRVEAAY 871
Query: 541 RNMWHRYC 548
R MW R+C
Sbjct: 872 RAMWRRWC 879
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P AE N+LG Y+ + L+ AV+ Y+ AL I+ + + NNLG+ QG + A
Sbjct: 197 PGDAETLNSLGRAYQSQQRLEDAVDSYRKALEIQSDSPEIWNNLGISQQSQGYPNQALAS 256
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
E+A+ P Y +A+N+ G R+ G + A+ +++ L +DP + +A NR L +
Sbjct: 257 FERALTLQPDYVKAHNSRGRALRELGRVEEALACHDRALNLDPKNADAHNNRGLTL 312
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G A E+ + + A+ ++ A + +P A+A NN G+ + +A+ Y AL ++P
Sbjct: 275 GRALRELGRVEEALACHDRALNLDPKNADAHNNRGLTLMLLGRIGEAIASYTQALLLRPE 334
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ +L LG+ + G+ D A + A+A P AY N G+ G A+ ++
Sbjct: 335 DADTLIVLGLALSDVGRFDEALTCYKHALAIAPDSVPAYVNQGISMHYLGRDDTALACFD 394
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINE 149
Q L IDPD+ A NR + M ++
Sbjct: 395 QALSIDPDAIEAWSNRGIVMQHLGR 419
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG++ + A+ +E A P +A N+ G ++ +++A+ C+ AL++
Sbjct: 239 NLGISQQSQGYPNQALASFERALTLQPDYVKAHNSRGRALRELGRVEEALACHDRALNLD 298
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + NN G+ + G++ A +A+ P A+ LG+ D G A+
Sbjct: 299 PKNADAHNNRGLTLMLLGRIGEAIASYTQALLLRPEDADTLIVLGLALSDVGRFDEALTC 358
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y+ L I PDS A N+ ++M+Y+ G DD
Sbjct: 359 YKHALAIAPDSVPAYVNQGISMHYL--GRDD 387
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 69/132 (52%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG AY + + A+ Y A E NNLG+ + + ++A+ ++ AL+
Sbjct: 203 LNSLGRAYQSQQRLEDAVDSYRKALEIQSDSPEIWNNLGISQQSQGYPNQALASFERALT 262
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P++ ++ N+ G G+++ A ++A+ +P A+A+NN G+ G I AI
Sbjct: 263 LQPDYVKAHNSRGRALRELGRVEEALACHDRALNLDPKNADAHNNRGLTLMLLGRIGEAI 322
Query: 121 DAYEQCLKIDPD 132
+Y Q L + P+
Sbjct: 323 ASYTQALLLRPE 334
>gi|398805152|ref|ZP_10564133.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
gi|398092314|gb|EJL82729.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
Length = 759
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/546 (34%), Positives = 292/546 (53%), Gaps = 3/546 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + A+ Y A P+ EA +NLG + + D AV Y+ AL I
Sbjct: 202 NLGATLRTLGQLTEAVDCYRQALKIRPNFIEAHHNLGNLLAELGQADSAVASYREALEIN 261
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F++SL +G V +G+ D A E +A+A P YA+A++NLG +D G + ++ +
Sbjct: 262 PDFAESLTAMGAVLQTRGQFDEAVECHRRALAIKPDYAQAHSNLGNALQDLGQLESSLKS 321
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
+ L++ PD A + L NY+ + L R +G R +W NT DP
Sbjct: 322 TRRALELQPDFTEAHNSLLFVHNYLADQPVVNLLIEARRFGDVLARRARPALAWANTPDP 381
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
R L +G VS D+ H V YF++A + + ++ ++ + R K +
Sbjct: 382 HRRLRVGLVSGDFCIHPVGYFLDAVMAALASSATSLELFGYPTRSCDDELSQRLKACCRA 441
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
W + G+ ++ A ++RED IDIL++L+GHTA N+L + A +PAPVQ++W+GY TTG
Sbjct: 442 --WHSLVGLSDEHAAELIREDGIDILIDLSGHTAFNRLPVFAWKPAPVQLSWLGYFATTG 499
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+P +DY + D + E++ RLPE LC+TP V P PAL+NG++TFG
Sbjct: 500 VPAMDYLLADPWTLTASEEASFTEKIWRLPETRLCFTPPSADIGVSPPPALSNGYVTFGC 559
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FNNL K+ V+++WA+IL VP SRL +K + S + ++ G+E R+ +L
Sbjct: 560 FNNLTKMNDAVVKLWAQILNTVPASRLFLKARQLQQASAQREVMARFAAHGIEPGRL-IL 618
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ +++ AY +DI+LD FPY G TTT E+L+MGVP +T+AG GV L+
Sbjct: 619 EDYVPRENYLAAYQRVDIALDPFPYPGGTTTVEALWMGVPVLTLAGERFLSRQGVGLMMN 678
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
GL +A + +Y+ A+ A D+ LA LR LR SP+ D FA E+ R
Sbjct: 679 AGLPEWVASDPRDYLSRAVAHAGDLQKLATLRAGLRSQALASPIFDAPRFAGHFETALRG 738
Query: 543 MWHRYC 548
MW +C
Sbjct: 739 MWQAWC 744
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A+A + L + + + ++ + Y+ L P+ + LNNLG V G
Sbjct: 118 YRHALELQPSYADADDKLVNLLRRLERFEELADTYRRMLETNPHNADWLNNLGAVQRKLG 177
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ +A +A+AA+P A A+NNLG R G ++ A+D Y Q LKI P+ A N
Sbjct: 178 RFKDSAASFRRAVAADPDDALAHNNLGATLRTLGQLTEAVDCYRQALKIRPNFIEAHHN 236
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+F+ Y NPH A+ NNLG + + + ++ A++ P+ + + NNL
Sbjct: 144 RFEELADTYRRMLETNPHNADWLNNLGAVQRKLGRFKDSAASFRRAVAADPDDALAHNNL 203
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G G++ A + +A+ P + EA++NLG L + G A+ +Y + L+I+PD
Sbjct: 204 GATLRTLGQLTEAVDCYRQALKIRPNFIEAHHNLGNLLAELGQADSAVASYREALEINPD 263
Query: 133 SRNAGQNRLLAMNYI--NEGHDDKLFEAHR 160
+ L AM + G D+ E HR
Sbjct: 264 FAES----LTAMGAVLQTRGQFDEAVECHR 289
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N G + A+ + A + P A A NLG + D + A Y+ AL++
Sbjct: 31 FNRGTILLDRGDAQQALEAFMKAVRYKPDSAGAHFNLGATHARLDQHEAAASSYREALAL 90
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+F+++ LG G+ +AAAE A+ P+YA+A + L L R D
Sbjct: 91 KPDFAEAELALGAALEELGQDEAAAESYRHALELQPSYADADDKLVNLLRRLERFEELAD 150
Query: 122 AYEQCLKIDP 131
Y + L+ +P
Sbjct: 151 TYRRMLETNP 160
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
+A E + + A+ Y+ A P A A N G I DR + +A+E + A+ KP+
Sbjct: 1 MALEEQGQLEEALRCYDRAVSLEPELARAHFNRGTILLDRGDAQQALEAFMKAVRYKPDS 60
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + NLG + + +AAA +A+A P +AEA LG + G A ++Y
Sbjct: 61 AGAHFNLGATHARLDQHEAAASSYREALALKPDFAEAELALGAALEELGQDEAAAESYRH 120
Query: 126 CLKIDPDSRNA 136
L++ P +A
Sbjct: 121 ALELQPSYADA 131
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG + + + + A Y A P AEA LG ++ + A E Y+ AL +
Sbjct: 65 FNLGATHARLDQHEAAASSYREALALKPDFAEAELALGAALEELGQDEAAAESYRHALEL 124
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P+++ + + L + + + A+ + + NP A+ NNLG + R G +
Sbjct: 125 QPSYADADDKLVNLLRRLERFEELADTYRRMLETNPHNADWLNNLGAVQRKLGRFKDSAA 184
Query: 122 AYEQCLKIDPDSRNAGQN 139
++ + + DPD A N
Sbjct: 185 SFRRAVAADPDDALAHNN 202
>gi|196230691|ref|ZP_03129552.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196225032|gb|EDY19541.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 684
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/548 (36%), Positives = 299/548 (54%), Gaps = 15/548 (2%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG G F AI ++ A PH AEA NNLGV Y + A+E Q A + P
Sbjct: 146 LGKILGSSGDFAQAIASFQQALAIQPHFAEAWNNLGVTYHESGQAGPALEALQRAAQLNP 205
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N + NNLG + ++D A +A+ +P + +AYN L + G + AI A
Sbjct: 206 NAPEIHNNLGRLLGDLDQLDEAIAAYRRALDLHPHFPDAYNGLAQAFNRRGQVDEAIAAL 265
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKDP 182
Q ++ A N + +++ + E R W F+ L S S NT++P
Sbjct: 266 RQIVQGGSSFAGAHSNLIYTLHFHPAQDAALIAEEQRRWNAHFLEPLRSSIASHTNTREP 325
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+R L IG VSPD+ H + + HD N+++ YS V + D T FR+
Sbjct: 326 DRRLRIGLVSPDFCQHVIGRNVLPYFEQHDPANFEIYCYSEVARPDRWTDLFRQHADH-- 383
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WR I G+ ++ +A ++R+D +D+LV+LT H A N+L M A QPAPVQ ++ GYP TG
Sbjct: 384 --WRPITGLSDEALANLIRQDAVDVLVDLTQHMAGNRLTMFARQPAPVQASFAGYPAGTG 441
Query: 303 LPTIDYRITDS-LADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
+ TI YR++D L + P + ++ + L + F CY PV P PA TNG ITFG
Sbjct: 442 VETIHYRLSDRFLENGPSSGER-----VFLLDSFWCYATQGMDIPVNPLPASTNGHITFG 496
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
+ NNL K+ +L+ WARIL AV SRL++ S R R L++LG+ES RV+
Sbjct: 497 ALNNLTKVNEPLLESWARILGAVKGSRLLLLGSR---GSHRQRITDFLQRLGVESHRVEF 553
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
L L ++++ + +D+ LD+FPY G TT+ ++L+MGVP V++AG+ G+S+L+
Sbjct: 554 L-LPCRREEYLRYHQRIDLILDSFPYNGHTTSLDALWMGVPVVSLAGNTSVSRGGLSILS 612
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+ L L+A++ D+YV++A+ LA+D+ LA LR SLR M S + D FA +E +R
Sbjct: 613 NLALAELVARSADDYVRVAVDLATDLPRLATLRASLRSRMEASVLMDASRFADSIEDAFR 672
Query: 542 NMWHRYCK 549
+MW +C+
Sbjct: 673 SMWREWCQ 680
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG Y + A+ Y+ A P EA +NLG++ D+ L +A + AL +
Sbjct: 77 SLGEVYRTQGRPQEAMESYQRALQLRPGYPEAASNLGLVLADQGRLSEAAAACRSALQSR 136
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + N LG + G A ++A+A P +AEA+NNLGV Y ++G A++A
Sbjct: 137 PDFAPAHNILGKILGSSGDFAQAIASFQQALAIQPHFAEAWNNLGVTYHESGQAGPALEA 196
Query: 123 YEQCLKIDPDS 133
++ +++P++
Sbjct: 197 LQRAAQLNPNA 207
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A Y P+ +NLG+I L A E + AL + + +LG VY
Sbjct: 23 AEAIYRQILGVQPNHVGVLHNLGLIAVQTGRLAMAEELIRKALGLDAGNAIIHCSLGEVY 82
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
QG+ A E ++A+ P Y EA +NLG++ D G +S A A L+ PD
Sbjct: 83 RTQGRPQEAMESYQRALQLRPGYPEAASNLGLVLADQGRLSEAAAACRSALQSRPD 138
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
+Y R L +A Y+ L ++PN L+NLG++ G++ A E+I KA+ + A
Sbjct: 15 LYAGR--LAEAEAIYRQILGVQPNHVGVLHNLGLIAVQTGRLAMAEELIRKALGLDAGNA 72
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ +LG +YR G A+++Y++ L++ P A N
Sbjct: 73 IIHCSLGEVYRTQGRPQEAMESYQRALQLRPGYPEAASN 111
>gi|381160367|ref|ZP_09869599.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
gi|380878431|gb|EIC20523.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
Length = 697
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 317/586 (54%), Gaps = 50/586 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ ++ ++D+A+ ++ P A A NN G++ K+ L++A+ Y ALS++
Sbjct: 115 NLGLTLKDLERYDLALAAFDRVLRLKPGFAAAHNNRGIVLKELGRLEEALTAYDTALSLR 174
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+++ NN G V G+ A + A+ P A+AYN G + +D G I+ A+ A
Sbjct: 175 PDFAKAHNNRGFVLKDLGRYTDALAACDAALQLQPDLADAYNTRGYVLKDMGRIAEALAA 234
Query: 123 YEQCLKIDPDSRNAGQNR---LLAMNYINE-----------------GHDDKLFEAHRDW 162
E L++ PD +A NR L A+ Y NE H+++LF H +
Sbjct: 235 CETGLELQPDLVDAHNNRGGLLQALGYQNEAIASYCEAIRIKPDYSLAHNNRLFALH--Y 292
Query: 163 GKR------------FMRLYSQYTSWDNTKDPERP-----LVIGYVSPDYFTHSVSYFIE 205
G+R F + + +D ++P R + IGYVS D+ H V YF+E
Sbjct: 293 GERTPSGAIWAAACEFGDKFGKPRFFD--QEPFRGKSDGRVHIGYVSGDFHNHPVGYFLE 350
Query: 206 APLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKI 265
+ L HD++ + V Y D T R + + +WR + GI++ A +R D+I
Sbjct: 351 SVLKNHDHKKFSVHCYDTQGAQDDLTARLK----RHAQVWRSLVGINDAGAAEQIRSDEI 406
Query: 266 DILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHV 325
DIL++L+GHTA+N+L + A +PAPVQVTW+GY TTGLPTIDY + D +Q
Sbjct: 407 DILIDLSGHTAHNRLLVFAQRPAPVQVTWLGYFGTTGLPTIDYILADRYVVTETDEQFFS 466
Query: 326 EELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
E+++RLP +LC+TP E + P + N FI F SFNN+AK++ + + +WA+I+ VP
Sbjct: 467 EKIVRLPHSYLCFTPPTENVGIKPCRSARN-FIKFASFNNIAKLSDQTIWLWAQIILRVP 525
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
NS+LV++ K +VR R + G+ R+D+ P L +++++Y+ +DISL
Sbjct: 526 NSQLVIRDKALGDATVRQRIIDRFAIQGVVQERLDIKP-SLRREEYLESYNDVDISLSPT 584
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
P+ G TTT E+L+MGVP V + G + S++ VGL+ L+A+ E+EY+ +A LA+
Sbjct: 585 PFGGGTTTAEALWMGVPVVCLRGGTWVGRISESIIKTVGLRDLVAETEEEYIHIATSLAT 644
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM---WHRYC 548
L +R LR + SP CD F LE + M W R C
Sbjct: 645 RADQLHEMRSGLRSRLENSPFCDCPAFTRDLEEAFLGMLDSWRRPC 690
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + A+ ++ A P A N G + + D+A+ ++ A++++
Sbjct: 47 NLGNALLSLGRPQDALGAFDSAVALEPEDAILRFNRGNLLRQLGRYDQAILAFEAAINLQ 106
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF++ NLG+ + D A ++ + P +A A+NN G++ ++ G + A+ A
Sbjct: 107 PNFAEGYLNLGLTLKDLERYDLALAAFDRVLRLKPGFAAAHNNRGIVLKELGRLEEALTA 166
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y+ L + PD A NR
Sbjct: 167 YDTALSLRPDFAKAHNNR 184
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%)
Query: 10 EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL 69
E + A+ Y++ P A NNLG A+ + A++++P +
Sbjct: 20 ESGNLEAAVAGYQVVLGARPDLASVHNNLGNALLSLGRPQDALGAFDSAVALEPEDAILR 79
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N G + G+ D A E AI P +AE Y NLG+ +D LA+ A+++ L++
Sbjct: 80 FNRGNLLRQLGRYDQAILAFEAAINLQPNFAEGYLNLGLTLKDLERYDLALAAFDRVLRL 139
Query: 130 DPDSRNAGQNRLLAM 144
P A NR + +
Sbjct: 140 KPGFAAAHNNRGIVL 154
>gi|196232945|ref|ZP_03131794.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196222923|gb|EDY17444.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 808
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 294/555 (52%), Gaps = 17/555 (3%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGVA E + D A+ + + P AE NNLG ++ D+A+ Y+ AL+++
Sbjct: 255 NLGVACKERGRTDEAVAAFRRSIELQPDFAETHNNLGNTLQECGRADEAIAAYRRALALQ 314
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++ + NNL G +D A I +A+ P ++ NNLG + +D G + AI A
Sbjct: 315 PEYAAAANNLASTLRSVGLLDEATAAIRRALELQPALSDIRNNLGNILKDQGDVEGAIGA 374
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS-QYTSWDNTKD 181
Y + L+++P QN + ++ Y G + + W + S+ N +D
Sbjct: 375 YREALQLEPVHPATWQNLIYSLLYQPGGDETTIVREQERWSATLCAPFRPARPSYPNARD 434
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
PER L +GYVSP+Y H + HD+Q + V YS V + D T FR+
Sbjct: 435 PERKLRVGYVSPEYRDHVTGRNLIPLFRCHDHQQFDFVYYSGVFREDWLTGEFRQAA--- 491
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
W G+ ++ +A M+R+D++DILV+LT H N+LG A +PAPVQV++ GYP +
Sbjct: 492 -DAWTSTVGVSDEALATMIRKDEVDILVDLTQHMGGNRLGAFARRPAPVQVSFAGYPASA 550
Query: 302 GLPTIDYRITD--------SLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL 353
GL TI YR++D +AD + + E + L + F CY P PV PA
Sbjct: 551 GLETIGYRLSDRWVEGEGEKMADGKWQRARGGTERVFLLDSFWCYDPCGVEVPVNALPAR 610
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
+G +TFG NN K+ +L++WAR+L AV ++RLV+ S R R L LE+ G
Sbjct: 611 ESGRLTFGCLNNFCKVNEPLLRLWARVLVAVKDARLVLSSPR---GSHRQRTLDFLERAG 667
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ RV+ + +++ Y +D+ LDTFPY G TT+ ++L+MGVP V++AG
Sbjct: 668 VAPRRVEFVE-PCPRRAYLELYHQLDVVLDTFPYNGHTTSLDALWMGVPVVSLAGKPAVS 726
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
G+S L+ +GL L+A +EDEYV +A +LA LA LR +LR M S + DG + A
Sbjct: 727 RAGLSQLSNLGLPELVAHSEDEYVAVAARLAGASPRLAELRSTLRTRMEGSVLMDGAHLA 786
Query: 534 LGLESTYRNMWHRYC 548
+E YR MW +C
Sbjct: 787 RQMEEAYRAMWQLWC 801
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 77/137 (56%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGVA E +F+ A+ Y+ A P A A NNLG +++R LD+A+ + A+ ++
Sbjct: 187 NLGVACKEAGRFEEAVAAYQRAIELQPDHAAAHNNLGAAWRERGALDEAIVAQRRAIELR 246
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+++ NNLGV +G+ D A ++I P +AE +NNLG ++ G AI A
Sbjct: 247 PDFAEAYNNLGVACKERGRTDEAVAAFRRSIELQPDFAETHNNLGNTLQECGRADEAIAA 306
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L + P+ A N
Sbjct: 307 YRRALALQPEYAAAANN 323
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG A E ++ AI Y A P +A NNLGV K+ ++AV YQ A+ +
Sbjct: 152 YNLGNALRERKRYGEAIAAYRQAIALGPDYVDAHNNLGVACKEAGRFEEAVAAYQRAIEL 211
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P+ + + NNLG + +G +D A +AI P +AEAYNNLGV ++ G A+
Sbjct: 212 QPDHAAAHNNLGAAWRERGALDEAIVAQRRAIELRPDFAEAYNNLGVACKERGRTDEAVA 271
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINE-GHDDKLFEAHRDWGKRFMRLYSQYTSWDN 178
A+ + +++ PD N N + E G D+ A+R R + L +Y + N
Sbjct: 272 AFRRSIELQPDFAETHNN---LGNTLQECGRADEAIAAYR----RALALQPEYAAAAN 322
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++NLGVA E + D AI ++ A P A NLG ++R +A+ Y+ A++
Sbjct: 117 LHNLGVACKESGRLDEAIAAFQGALRLQPQLMVAHYNLGNALRERKRYGEAIAAYRQAIA 176
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P++ + NNLGV G+ + A ++AI P +A A+NNLG +R+ G++ AI
Sbjct: 177 LGPDYVDAHNNLGVACKEAGRFEEAVAAYQRAIELQPDHAAAHNNLGAAWRERGALDEAI 236
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
A + +++ PD A N L + G D+ A R
Sbjct: 237 VAQRRAIELRPDFAEAYNN--LGVACKERGRTDEAVAAFR 274
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 2/159 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y+LG A + + AI Y A P EA +NLGV K+ LD+A+ +Q AL +
Sbjct: 84 YDLGNALRSRKRLEDAIAAYRRAIELRPDYVEALHNLGVACKESGRLDEAIAAFQGALRL 143
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P + NLG + + A +AIA P Y +A+NNLGV ++AG A+
Sbjct: 144 QPQLMVAHYNLGNALRERKRYGEAIAAYRQAIALGPDYVDAHNNLGVACKEAGRFEEAVA 203
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
AY++ +++ PD A N L + G D+ A R
Sbjct: 204 AYQRAIELQPDHAAAHNN--LGAAWRERGALDEAIVAQR 240
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 53/96 (55%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+L + + L +A Y+ L+++P+ +Q+L+ LGV+ G+ +AA ++ ++IA
Sbjct: 17 DLALQHHQAGRLAEAEGLYRQILAVQPDHAQALHLLGVIALQMGQHEAAENLLRRSIAMA 76
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
P A+ +LG R + AI AY + +++ PD
Sbjct: 77 PDNPAAHYDLGNALRSRKRLEDAIAAYRRAIELRPD 112
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
++L + + + + A Y P A+A + LGVI + A + ++++
Sbjct: 16 FDLALQHHQAGRLAEAEGLYRQILAVQPDHAQALHLLGVIALQMGQHEAAENLLRRSIAM 75
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+ + +LG + +++ A +AI P Y EA +NLGV +++G + AI
Sbjct: 76 APDNPAAHYDLGNALRSRKRLEDAIAAYRRAIELRPDYVEALHNLGVACKESGRLDEAIA 135
Query: 122 AYEQCLKIDP 131
A++ L++ P
Sbjct: 136 AFQGALRLQP 145
>gi|425450472|ref|ZP_18830298.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 7941]
gi|389768683|emb|CCI06276.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 7941]
Length = 1254
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 297/553 (53%), Gaps = 8/553 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G + KF A YE+A F P E NL +I++ +D L +A+ Y+ L+
Sbjct: 414 LINTGNKWERRGKFLQAQNCYEMALEFEPSAIEPLFNLALIFQQQDKLPEAIAYYRQVLT 473
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ PN+ +L N G+V G + A +K + + + A +L G I+ A+
Sbjct: 474 LDPNYIPALQNCGMVLDKIGYIHEAIGYYQKILTIDNDHLSALKSLASCAEKLGKIANAV 533
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
D + L+++P L + ++ ++ W + S T + +
Sbjct: 534 DYCHKFLQLEPHDSVNHSFLLWCFGALTIVSPQEILDSSYLWYIYHVVKQSLPTLKHHPR 593
Query: 181 --DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
DP+RPL IGY+SPD+ HS S+FI+ L H + +++ Y+ V K D T EK+
Sbjct: 594 QPDPDRPLRIGYISPDFRRHSCSFFIKPLLENHHHDQFEIFAYAEVAKEDYVT----EKI 649
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
WR G+ + +VA +++ D+IDILV+L GHT +L ++ +PAP+Q T++GY
Sbjct: 650 QATCDHWRCTVGLSDLEVAELIQADQIDILVDLAGHTVGTRLKVLGIKPAPIQATYLGYF 709
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGLPTIDY ITD P +T + E + RLP C+L Y + V P P G I
Sbjct: 710 ATTGLPTIDYWITDEDLHPLDTPELTSETIWRLPRCYLTYDNYLDTPEVSPLPCQKTGLI 769
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC--KPFCCDSVRHRFLSTLEQLGLES 416
TFGS NN K+TP+ L VW +IL AVPNSRL +K + V+ ++ Q G+ +
Sbjct: 770 TFGSLNNTRKLTPETLDVWCQILKAVPNSRLFLKAIHQAGVDPRVQENIINDFTQRGISA 829
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ + +L N H +Y+ +DI LD FPY G TTTCE+L+MGVP +T+AG + +
Sbjct: 830 DRLFIQGGLLGNQAHFSSYNNVDIHLDPFPYGGCTTTCEALWMGVPTLTLAGGRNMERLS 889
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
V+LL VGL IA ++YVQ A+Q A D LANLR ++RD +++S + D + A +
Sbjct: 890 VTLLKAVGLDEWIADTPEDYVQKAVQFAQDTVYLANLRATMRDRLAQSELLDAEGMAAAM 949
Query: 537 ESTYRNMWHRYCK 549
E YR MW Y +
Sbjct: 950 EEAYRQMWQIYLE 962
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+L Y + A +Y A P E NLGV+ +++ DKAV C+Q + K
Sbjct: 1088 SLAQLYDRQENYAKAEKYYRCALLLQPDNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAK 1147
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +LG+ Y Q + A EKAI +P YA AY NLGV+Y A+D
Sbjct: 1148 PQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGVVYSCQPDEKKAVDC 1207
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW 162
+ QCL+ DP ++ A L A++ I E +++++A W
Sbjct: 1208 FRQCLRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRW 1247
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YNLG+ Y ++ + + AI Y + + E +L +Y ++N KA + Y+ AL
Sbjct: 1052 FYNLGLVYEQLEETEKAIACYSHSVQLDSTNMEVYKSLAQLYDRQENYAKAEKYYRCALL 1111
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P+ + NLGVV Q K D A +K I A P A AY +LG+ Y+ ++ A
Sbjct: 1112 LQPDNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAK 1171
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+E+ +++DPD AM Y N G
Sbjct: 1172 SCFEKAIELDPD---------YAMAYYNLG 1192
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 48 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
L+ A Y A+ + +++S +NLG + QG+++ A ++AI + P Y A+ NLG
Sbjct: 997 LESAKNFYLQAIKVDATYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPTAFYNLG 1056
Query: 108 VLYRDAGSISLAIDAYEQCLKID 130
++Y AI Y +++D
Sbjct: 1057 LVYEQLEETEKAIACYSHSVQLD 1079
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A FY A + A++ +NLG + + L++A+ YQ A+ +P++ + NL
Sbjct: 996 ELESAKNFYLQAIKVDATYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPTAFYNL 1055
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G+VY + + A ++ + T E Y +L LY + + A Y L + PD
Sbjct: 1056 GLVYEQLEETEKAIACYSHSVQLDSTNMEVYKSLAQLYDRQENYAKAEKYYRCALLLQPD 1115
Query: 133 S 133
+
Sbjct: 1116 N 1116
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 76/200 (38%), Gaps = 49/200 (24%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK-----DRDNLD----KAV 52
YNLGV + ++ AI +Y NP A+A LG+ K R+NL+ +A+
Sbjct: 298 YNLGVVKEKQQQWQSAIAYYRQGIRLNPQYAKAYYRLGLNLKQQLINQRENLEDEKKQAI 357
Query: 53 -----ECYQMALSIKPN-----------------------------------FSQSLNNL 72
EC L++ PN F L N
Sbjct: 358 TLEIGECLTQVLNLDPNHPSIKFQLAKFWQDQGESAKAKSLLTAKEWDLLPDFVAYLINT 417
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + +GK A E A+ P+ E NL ++++ + AI Y Q L +DP+
Sbjct: 418 GNKWERRGKFLQAQNCYEMALEFEPSAIEPLFNLALIFQQQDKLPEAIAYYRQVLTLDPN 477
Query: 133 SRNAGQNRLLAMNYINEGHD 152
A QN + ++ I H+
Sbjct: 478 YIPALQNCGMVLDKIGYIHE 497
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+ LG T+ G++++A +AI + TYA++Y+NLG L G + AI Y+Q ++
Sbjct: 985 HQLGREKTLTGELESAKNFYLQAIKVDATYAKSYHNLGFLAAQQGQLEEAISYYQQAIES 1044
Query: 130 DPDSRNAGQNRLLAMNYINE 149
PD A N L + E
Sbjct: 1045 QPDYPTAFYNLGLVYEQLEE 1064
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AE ++LG + + + A Y A+ + SQS NLGVV Q + +A +
Sbjct: 260 AEIAHHLGNQFTQQGHFALAESWYLKAIELDTERSQSYYNLGVVKEKQQQWQSAIAYYRQ 319
Query: 92 AIAANPTYAEAYNNLGV 108
I NP YA+AY LG+
Sbjct: 320 GIRLNPQYAKAYYRLGL 336
>gi|182412285|ref|YP_001817351.1| hypothetical protein Oter_0461 [Opitutus terrae PB90-1]
gi|177839499|gb|ACB73751.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
Length = 627
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 291/523 (55%), Gaps = 9/523 (1%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P EA +L K ++ L +A++CYQ A+ ++P + + N G+ ++ + A
Sbjct: 104 QPQLHEAWTHLAHCLKTQNRLREAIDCYQKAIELEPKDALAWYNYGLTLSLAARPLEALA 163
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
E+A+A +P +AEA + I A++ Y + L P + A RL A++Y+
Sbjct: 164 CHERALAIDPHHAEARFGRAQALQQTNRIPEAVEDYGRVLARQPGNLEARSYRLFALHYL 223
Query: 148 NEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAP 207
D+LF H ++G+ + ++ N DP R L +G +SPD+ H+ +YFIE
Sbjct: 224 EGVSRDQLFAEHVEYGR--IAGGPTVQAFKNVPDPNRRLRVGVLSPDFRLHACAYFIEPL 281
Query: 208 LVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
L + + + +++ +Y + D T RFR + +WR+ G V A +RED D+
Sbjct: 282 LQHLNPREFELCLYHNHPREDEVTARFR----TRAAVWRNFVGRSHSFVEATIREDAPDV 337
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP-ETKQKHVE 326
L++L GHT N+L + A + APVQ+T++GYP+TTG+ +DYR TD+LADPP E E
Sbjct: 338 LIDLAGHTGFNRLPIFAHRLAPVQITYLGYPDTTGVAAMDYRFTDALADPPGEADALATE 397
Query: 327 ELIRLPECFLCYTPSPEA-GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
+L+R Y P++ P PA +G + FGSFNNL+KIT +L VW R+L VP
Sbjct: 398 KLVRFAPTAWAYLAPPDSLAPNTREPA-ADGSVVFGSFNNLSKITDSMLAVWGRLLKQVP 456
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
N RL++K R R+++ +E GL RV+LL H+ Y +D++LDTF
Sbjct: 457 NGRLLLKGVGLSEPESRGRYVARMETAGLPVDRVELLERTPDTAAHLALYHRVDVALDTF 516
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
PY GTTTTCE+L+MGVP VT+AG H+ VGVSLL+ VG IA + D+YV +AL LA+
Sbjct: 517 PYHGTTTTCEALWMGVPVVTLAGDRHSSRVGVSLLSAVGHSEWIAHSADDYVAIALALAA 576
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
D A LR LR+ + +SP+ D A + R W +C
Sbjct: 577 DPARRAQLRRDLREGLKRSPLLDHPAQAARFAAGLRQCWGEWC 619
>gi|440752107|ref|ZP_20931310.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176600|gb|ELP55873.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 1254
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 195/553 (35%), Positives = 295/553 (53%), Gaps = 8/553 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G + KF A YE+A F P E NL VI++ +D L +A+ Y+ L+
Sbjct: 414 LINTGNKWERRGKFLQAQNCYEMALEFEPSAIEPLFNLAVIFQQQDKLPEAIAYYRQVLT 473
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ PN +L N G+V G + A +K + + + A +L G I+ A+
Sbjct: 474 LDPNHIPALQNCGIVLDKIGYIHEAIAYYQKILTIDNDHLSALKSLASCAEKLGKIANAV 533
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
D + ++++P L + ++ ++ W + S T + +
Sbjct: 534 DYCHKIMQLEPHDCGNHSFLLWCFGALTIVSPQEILDSSYLWYIYHVVKQSLPTVKYHQR 593
Query: 181 --DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
DP+ L IGY+SPD+ HS S+FI+ L H + +++ Y+ V K D T EK+
Sbjct: 594 QPDPDHRLRIGYISPDFRRHSCSFFIKPLLENHHHDQFEIFAYAEVEKGDQIT----EKI 649
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
WR G+ + +VA +++ D+IDILV+L GHTA N+L ++ +PAP+Q T++GY
Sbjct: 650 QATCDHWRSTVGLSDLEVAELIQADQIDILVDLAGHTAGNRLKVLGIKPAPIQATYLGYF 709
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGLPTIDY ITD P +T + E + RLP C+L Y + V P P G I
Sbjct: 710 ATTGLPTIDYWITDEDLHPSDTPELTSETIWRLPRCYLTYNNYLDTPAVSPLPFEKTGLI 769
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC--KPFCCDSVRHRFLSTLEQLGLES 416
TFGS NN K+TP+ L VW +IL AVPNSRL +K + V+ ++ Q G+ +
Sbjct: 770 TFGSLNNTRKLTPETLDVWCQILKAVPNSRLFLKAIHQAGVDPRVQENIINDFTQRGISA 829
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ + L + H +Y+ +DI LD FPY G TTTCE+L+MGVP +T+AG + +
Sbjct: 830 DRLFIQGKFLDDQAHFSSYNNVDIHLDPFPYGGCTTTCEALWMGVPTLTLAGGRNMERLS 889
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
V+LL VGL IA ++YVQ A+Q A D LANLR ++RD +++S + D + A +
Sbjct: 890 VTLLKAVGLDEWIADTPEDYVQKAVQFAQDTVYLANLRATMRDRLAQSELLDAKGMAAAM 949
Query: 537 ESTYRNMWHRYCK 549
E YR MW Y +
Sbjct: 950 EEAYRQMWQIYLE 962
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+L Y + A +Y A PH E NLGV+ +++ DKAV C+Q + K
Sbjct: 1088 SLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAK 1147
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +LG+ Y Q + A EKAI +P YA AY NLGV+Y A+D
Sbjct: 1148 PQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGVVYSCQPDEKKAVDC 1207
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW 162
+ Q L+ DP ++ A L A++ I + +++++A W
Sbjct: 1208 FRQSLRCDPANKLAHTALLFALSGIKQVSSEEIYDASSRW 1247
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YNLG+ Y ++ + + AI Y + + E +L +Y ++N KA + Y+ AL
Sbjct: 1052 FYNLGLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALL 1111
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P+ + NLGVV Q K D A +K I A P A AY +LG+ Y+ ++ A
Sbjct: 1112 LQPHNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAK 1171
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+E+ +++DPD AM Y N G
Sbjct: 1172 SCFEKAIELDPD---------YAMAYYNLG 1192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 48 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
L+ A Y A+ + P +++S +NLG + QG+++ A ++AI + P Y A+ NLG
Sbjct: 997 LESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLG 1056
Query: 108 VLYRDAGSISLAIDAYEQCLKID 130
++Y AI Y +++D
Sbjct: 1057 LVYEQLKETEKAIACYSHSVQLD 1079
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A FY A +P A++ +NLG + + L++A+ YQ A+ +P++ + NL
Sbjct: 996 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNL 1055
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+VY + + A ++ + T E Y +L LY + + A Y L + P
Sbjct: 1056 GLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQP 1114
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+ LG T+ G++++A +AI +PTYA++Y+NLG L G + AI Y+Q ++
Sbjct: 985 HQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIES 1044
Query: 130 DPDSRNAGQNRLLAMNYINE 149
PD +A N L + E
Sbjct: 1045 QPDYPSAFYNLGLVYEQLKE 1064
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 49/200 (24%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK-----DRDNLD----KAV 52
YNLGV + ++ AI +Y A NP A+A LG+ K R+NL+ +A+
Sbjct: 298 YNLGVVNEKQQQWQSAIDYYRQAIRLNPQYAKAYYRLGLNLKQQLINQRENLEDQKKQAI 357
Query: 53 -----ECYQMALSIKPN-----------------------------------FSQSLNNL 72
EC L++ PN F L N
Sbjct: 358 TLEIGECLTEVLNLDPNHPSIKFQLAKFWQDQGDLAKAKSLLTAKEWELLPDFVSYLINT 417
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + +GK A E A+ P+ E NL V+++ + AI Y Q L +DP+
Sbjct: 418 GNKWERRGKFLQAQNCYEMALEFEPSAIEPLFNLAVIFQQQDKLPEAIAYYRQVLTLDPN 477
Query: 133 SRNAGQNRLLAMNYINEGHD 152
A QN + ++ I H+
Sbjct: 478 HIPALQNCGIVLDKIGYIHE 497
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AE + LG + + + A Y A+ ++P QS NLGVV Q + +A + +
Sbjct: 260 AEIAHYLGNQFTQQGHFALAQSWYLKAIELEPERYQSYYNLGVVNEKQQQWQSAIDYYRQ 319
Query: 92 AIAANPTYAEAYNNLGV 108
AI NP YA+AY LG+
Sbjct: 320 AIRLNPQYAKAYYRLGL 336
>gi|159028889|emb|CAO90694.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1271
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 195/553 (35%), Positives = 295/553 (53%), Gaps = 8/553 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G + KF A YE+A F P E NL VI++ +D L +A+ Y+ L+
Sbjct: 431 LINTGNKWERRGKFLQAQNCYEMALEFEPSAIEPLFNLAVIFQQQDKLPEAIAYYRQVLT 490
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ PN +L N G+V G + A +K + + + A +L G I+ A+
Sbjct: 491 LDPNHIPALQNCGIVLDKIGYIHEAIAYYQKILTIDNDHLSARKSLASCAEKLGKIANAV 550
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
D + ++++P L + ++ ++ W + S T + +
Sbjct: 551 DYCHKIMQLEPHDCGNHSFLLWCFGALTIVSPQEILDSSYLWYIYHVVKQSLPTLKYHQR 610
Query: 181 --DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
DP+ L IGY+SPD+ HS S+FI+ L H + +++ Y+ V K D T EK+
Sbjct: 611 QPDPDHRLRIGYISPDFRRHSCSFFIKPLLENHHHDQFEIFAYAEVEKGDQIT----EKI 666
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
WR G+ + +VA +++ D+IDILV+L GHTA N+L ++ +PAP+Q T++GY
Sbjct: 667 QATCDHWRSTVGLSDLEVAELIQADQIDILVDLAGHTAGNRLKVLGIKPAPIQATYLGYF 726
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGLPTIDY ITD P +T + E + RLP C+L Y + V P P G I
Sbjct: 727 ATTGLPTIDYWITDEDLHPSDTPELTSETIWRLPRCYLTYNNYLDTPAVSPLPFEKTGLI 786
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC--KPFCCDSVRHRFLSTLEQLGLES 416
TFGS NN K+TP+ L VW +IL AVPNSRL +K + V+ ++ Q G+ +
Sbjct: 787 TFGSLNNTRKLTPETLDVWCQILKAVPNSRLFLKAIHQAGVDPRVQENIINDFTQRGISA 846
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ + L + H +Y+ +DI LD FPY G TTTCE+L+MGVP +T+AG + +
Sbjct: 847 DRLFIQGKFLDDQAHFSSYNNVDIHLDPFPYGGCTTTCEALWMGVPTLTLAGGRNMERLS 906
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
V+LL VGL IA ++YVQ A+Q A D LANLR ++RD +++S + D + A +
Sbjct: 907 VTLLKAVGLDEWIADTPEDYVQKAVQFAQDTVYLANLRATMRDRLAQSELLDAKGMAAAM 966
Query: 537 ESTYRNMWHRYCK 549
E YR MW Y +
Sbjct: 967 EEAYRQMWQIYLE 979
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+L Y + A +Y A PH E NLGV+ +++ DKAV C+Q + K
Sbjct: 1105 SLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAK 1164
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +LG+ Y Q + A EKAI +P YA AY NLGV+Y A+D
Sbjct: 1165 PQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGVVYSCQPDEKKAVDC 1224
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW 162
+ Q L+ DP ++ A L A++ I E +++++A W
Sbjct: 1225 FRQSLRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRW 1264
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YNLG+ Y ++ + + AI Y + + E +L +Y ++N KA + Y+ AL
Sbjct: 1069 FYNLGLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALL 1128
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P+ + NLGVV Q K D A +K I A P A AY +LG+ Y+ ++ A
Sbjct: 1129 LQPHNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAK 1188
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+E+ +++DPD AM Y N G
Sbjct: 1189 SCFEKAIELDPD---------YAMAYYNLG 1209
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 48 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
L+ A Y A+ + P +++S +NLG + QG+++ A ++AI + P Y A+ NLG
Sbjct: 1014 LESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLG 1073
Query: 108 VLYRDAGSISLAIDAYEQCLKID 130
++Y AI Y +++D
Sbjct: 1074 LVYEQLKETEKAIACYSHSVQLD 1096
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A FY A +P A++ +NLG + + L++A+ YQ A+ +P++ + NL
Sbjct: 1013 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNL 1072
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+VY + + A ++ + T E Y +L LY + + A Y L + P
Sbjct: 1073 GLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQP 1131
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+ LG T+ G++++A +AI +PTYA++Y+NLG L G + AI Y+Q ++
Sbjct: 1002 HQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIES 1061
Query: 130 DPDSRNAGQNRLLAMNYINE 149
PD +A N L + E
Sbjct: 1062 QPDYPSAFYNLGLVYEQLKE 1081
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 49/200 (24%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK-----DRDNLD----KAV 52
YNLGV + ++ AI +Y A NP A+A LG+ K R+NL+ +A+
Sbjct: 315 YNLGVVNEKQQQWQSAINYYRQAIRLNPQYAKAYYRLGLNLKQQLINQRENLEDQKKQAI 374
Query: 53 -----ECYQMALSIKPN-----------------------------------FSQSLNNL 72
EC L++ PN F L N
Sbjct: 375 TLEIGECLTEVLNLDPNHPSIKFQLAKFWQDQGDLAKAKSLLTAKEWELLPDFVSYLINT 434
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + +GK A E A+ P+ E NL V+++ + AI Y Q L +DP+
Sbjct: 435 GNKWERRGKFLQAQNCYEMALEFEPSAIEPLFNLAVIFQQQDKLPEAIAYYRQVLTLDPN 494
Query: 133 SRNAGQNRLLAMNYINEGHD 152
A QN + ++ I H+
Sbjct: 495 HIPALQNCGIVLDKIGYIHE 514
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AE + LG + + + A Y A+ ++P QS NLGVV Q + +A +
Sbjct: 277 AEIAHYLGNQFTQQGHFTLAQSWYLKAIELEPERYQSYYNLGVVNEKQQQWQSAINYYRQ 336
Query: 92 AIAANPTYAEAYNNLGV 108
AI NP YA+AY LG+
Sbjct: 337 AIRLNPQYAKAYYRLGL 353
>gi|443646867|ref|ZP_21129545.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|443335696|gb|ELS50160.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 1254
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 195/553 (35%), Positives = 295/553 (53%), Gaps = 8/553 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G + KF A YE+A F P E NL VI++ +D L +A+ Y+ L+
Sbjct: 414 LINTGNKWERRGKFLQAQNCYEMALEFEPSAIEPLFNLAVIFQQQDKLPEAIAYYRQVLT 473
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ PN +L N G+V G + A +K + + + A +L G I+ A+
Sbjct: 474 LDPNHIPALQNCGIVLDKIGYIHEAIAYYQKILTIDNDHLSARKSLASCAEKLGKIANAV 533
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
D + ++++P L + ++ ++ W + S T + +
Sbjct: 534 DYCHKIMQLEPHDCGNHSFLLWCFGALTIVSPQEILDSSYLWYIYHVVKQSLPTLKYHQR 593
Query: 181 --DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
DP+ L IGY+SPD+ HS S+FI+ L H + +++ Y+ V K D T EK+
Sbjct: 594 QPDPDHRLRIGYISPDFRRHSCSFFIKPLLENHHHDQFEIFAYAEVEKGDQIT----EKI 649
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
WR G+ + +VA +++ D+IDILV+L GHTA N+L ++ +PAP+Q T++GY
Sbjct: 650 QATCDHWRSTVGLSDLEVAELIQADQIDILVDLAGHTAGNRLKVLGIKPAPIQATYLGYF 709
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGLPTIDY ITD P +T + E + RLP C+L Y + V P P G I
Sbjct: 710 ATTGLPTIDYWITDEDLHPSDTPELTSETIWRLPRCYLTYNNYLDTPAVSPLPFEKTGLI 769
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC--KPFCCDSVRHRFLSTLEQLGLES 416
TFGS NN K+TP+ L VW +IL AVPNSRL +K + V+ ++ Q G+ +
Sbjct: 770 TFGSLNNTRKLTPETLDVWCQILKAVPNSRLFLKAIHQAGVDPRVQENIINDFTQRGISA 829
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ + L + H +Y+ +DI LD FPY G TTTCE+L+MGVP +T+AG + +
Sbjct: 830 DRLFIQGKFLDDQAHFSSYNNVDIHLDPFPYGGCTTTCEALWMGVPTLTLAGGRNMERLS 889
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
V+LL VGL IA ++YVQ A+Q A D LANLR ++RD +++S + D + A +
Sbjct: 890 VTLLKAVGLDEWIADTPEDYVQKAVQFAQDTVYLANLRATMRDRLAQSELLDAKGMAAAM 949
Query: 537 ESTYRNMWHRYCK 549
E YR MW Y +
Sbjct: 950 EEAYRQMWQIYLE 962
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+L Y + A +Y A PH E NLGV+ +++ DKAV C+Q + K
Sbjct: 1088 SLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAK 1147
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +LG+ Y Q + A EKAI +P YA AY NLGV+Y A+D
Sbjct: 1148 PQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGVVYSCQPDEKKAVDC 1207
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW 162
+ Q L+ DP ++ A L A++ I E +++++A W
Sbjct: 1208 FRQSLRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRW 1247
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YNLG+ Y ++ + + AI Y + + E +L +Y ++N KA + Y+ AL
Sbjct: 1052 FYNLGLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALL 1111
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P+ + NLGVV Q K D A +K I A P A AY +LG+ Y+ ++ A
Sbjct: 1112 LQPHNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAK 1171
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+E+ +++DPD AM Y N G
Sbjct: 1172 SCFEKAIELDPD---------YAMAYYNLG 1192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 48 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
L+ A Y A+ + P +++S +NLG + QG+++ A ++AI + P Y A+ NLG
Sbjct: 997 LESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLG 1056
Query: 108 VLYRDAGSISLAIDAYEQCLKID 130
++Y AI Y +++D
Sbjct: 1057 LVYEQLKETEKAIACYSHSVQLD 1079
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A FY A +P A++ +NLG + + L++A+ YQ A+ +P++ + NL
Sbjct: 996 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNL 1055
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+VY + + A ++ + T E Y +L LY + + A Y L + P
Sbjct: 1056 GLVYEQLKETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQP 1114
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+ LG T+ G++++A +AI +PTYA++Y+NLG L G + AI Y+Q ++
Sbjct: 985 HQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIES 1044
Query: 130 DPDSRNAGQNRLLAMNYINE 149
PD +A N L + E
Sbjct: 1045 QPDYPSAFYNLGLVYEQLKE 1064
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 49/200 (24%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK-----DRDNLD----KAV 52
YNLGV + ++ AI +Y A NP A+A LG+ K R+NL+ +A+
Sbjct: 298 YNLGVVNEKQQQWQSAINYYRQAIRLNPQYAKAYYRLGLNLKQQLINQRENLEDQKKQAI 357
Query: 53 -----ECYQMALSIKPN-----------------------------------FSQSLNNL 72
EC L++ PN F L N
Sbjct: 358 TLEIGECLTEVLNLDPNHPSIKFQLAKFWQDQGDLAKAKSLLTAKEWELLPDFVSYLINT 417
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + +GK A E A+ P+ E NL V+++ + AI Y Q L +DP+
Sbjct: 418 GNKWERRGKFLQAQNCYEMALEFEPSAIEPLFNLAVIFQQQDKLPEAIAYYRQVLTLDPN 477
Query: 133 SRNAGQNRLLAMNYINEGHD 152
A QN + ++ I H+
Sbjct: 478 HIPALQNCGIVLDKIGYIHE 497
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AE + LG + + + A Y A+ ++P QS NLGVV Q + +A +
Sbjct: 260 AEIAHYLGNQFTQQGHFTLAQSWYLKAIELEPERYQSYYNLGVVNEKQQQWQSAINYYRQ 319
Query: 92 AIAANPTYAEAYNNLGV 108
AI NP YA+AY LG+
Sbjct: 320 AIRLNPQYAKAYYRLGL 336
>gi|425435522|ref|ZP_18815972.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9432]
gi|389679929|emb|CCH91334.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9432]
Length = 1254
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 294/551 (53%), Gaps = 8/551 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G + KF A YE+A F P E NL +I++ +D L +A+ Y+ L+
Sbjct: 414 LINTGNQWERRGKFLQAQNCYEMALEFEPSAIEPLFNLALIFQKQDKLPEAIGYYRQVLT 473
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ PN+ +L N G++ G + A +K + + A L G I+ A+
Sbjct: 474 LDPNYIPALQNCGIILEKSGYIHEAISYYQKILTTDSDNVSALQCLATCAEKLGKIANAV 533
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
D + ++++P + L + ++ ++ W + S T + +
Sbjct: 534 DYSHKIMQLEPHNSINHSFLLWCFGALTIVSPQEILDSSYLWYIYHVVKQSLPTLKYHRR 593
Query: 181 --DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
DP+R L IGY+SPD+ HS S+FI+ L H + +++ Y+ V K D T EK+
Sbjct: 594 QPDPDRRLRIGYISPDFRRHSCSFFIKPLLENHHHDQFEIFAYAEVAKEDYVT----EKI 649
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
WR G+ + +VA +++ D+IDILV+L GHT +L ++ +PAP+Q T++GY
Sbjct: 650 QAACDHWRCTVGLSDLEVAELIQADQIDILVDLAGHTVGTRLKVLGIKPAPIQATYLGYF 709
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGLPTIDY ITD P +T + E + RLP C+L Y + V P P G I
Sbjct: 710 ATTGLPTIDYWITDEDLHPLDTPELTSETIWRLPRCYLTYNNYLDTPEVSPLPCQKTGLI 769
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC--KPFCCDSVRHRFLSTLEQLGLES 416
TFGS NN K+TP+ L VW +IL AVPNSRL +K + V+ ++ Q G+ +
Sbjct: 770 TFGSLNNTRKLTPETLDVWCQILKAVPNSRLFLKAIHQAGVDPRVQENIINDFTQRGISA 829
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ + +L N H +Y+ +DI LD FPY G TTTCE+L+MGVP +T+AG + +
Sbjct: 830 DRLFIQGGLLGNQAHFSSYNNVDIHLDPFPYGGCTTTCEALWMGVPTLTLAGGRNMERLS 889
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
V+LL VGL IA ++YVQ A+Q A D LANLR ++RD +++S + D + A +
Sbjct: 890 VTLLKAVGLDEWIADTPEDYVQKAVQFAQDTVYLANLRATMRDRLAQSELLDAEGMAAAM 949
Query: 537 ESTYRNMWHRY 547
E YR MW Y
Sbjct: 950 EEAYRQMWQIY 960
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+L Y + A +Y A PH E NLGV+ +++ DKAV C+Q + K
Sbjct: 1088 SLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAVSCFQKIIQAK 1147
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +LG+ Y Q + A EKAI +P YA AY NLGV+Y A+D
Sbjct: 1148 PQDAIAYLHLGISYKQQKLLTKAKSCFEKAIDLDPDYAMAYYNLGVVYSCQPDEKKAVDC 1207
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW 162
+ QCL+ DP ++ A L A++ I E +++++A W
Sbjct: 1208 FRQCLRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRW 1247
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 71/187 (37%), Gaps = 49/187 (26%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK-----DRDNLD----KAV 52
YNLGV + ++ AI +Y A NP A+A LG+ K R+NL+ +A+
Sbjct: 298 YNLGVVNEKEQQWQSAIDYYRQAIRLNPQYAKAYYRLGLNLKQQLINQRENLEDQKKQAI 357
Query: 53 -----ECYQMALSIKPN-----------------------------------FSQSLNNL 72
EC L++ PN F L N
Sbjct: 358 TLEIGECLTRVLNLDPNHPSIKFQLAKFWQDQGDLAKAKSLLTAKEWELLPDFVAYLINT 417
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + +GK A E A+ P+ E NL ++++ + AI Y Q L +DP+
Sbjct: 418 GNQWERRGKFLQAQNCYEMALEFEPSAIEPLFNLALIFQKQDKLPEAIGYYRQVLTLDPN 477
Query: 133 SRNAGQN 139
A QN
Sbjct: 478 YIPALQN 484
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AE + LG + + + A Y A+ ++P QS NLGVV + + +A + +
Sbjct: 260 AEIAHYLGNQFTQQGHFAVAQSWYLKAIELEPERYQSYYNLGVVNEKEQQWQSAIDYYRQ 319
Query: 92 AIAANPTYAEAYNNLGV 108
AI NP YA+AY LG+
Sbjct: 320 AIRLNPQYAKAYYRLGL 336
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 48 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
L+ A Y A+ + P +++S +NLG + QG++ A ++AI + P Y A+ NLG
Sbjct: 997 LESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLQQAISYYQQAIESQPDYPTAFYNLG 1056
Query: 108 VLYRDAGSISLAIDAYEQCLKID 130
++Y AI Y +++D
Sbjct: 1057 LVYEQLKETEKAIACYSHSVQLD 1079
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A FY A +P A++ +NLG + + L +A+ YQ A+ +P++ + NL
Sbjct: 996 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLQQAISYYQQAIESQPDYPTAFYNL 1055
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+VY + + A ++ + T E Y +L LY + + A Y L + P
Sbjct: 1056 GLVYEQLKETEKAIACYSHSVQLDATNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQP 1114
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+ LG T+ G++++A +AI +PTYA++Y+NLG L G + AI Y+Q ++
Sbjct: 985 HQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLQQAISYYQQAIES 1044
Query: 130 DPDSRNAGQNRLLAMNYINE 149
PD A N L + E
Sbjct: 1045 QPDYPTAFYNLGLVYEQLKE 1064
>gi|377820855|ref|YP_004977226.1| hypothetical protein BYI23_A014110 [Burkholderia sp. YI23]
gi|357935690|gb|AET89249.1| TPR repeat-containing protein [Burkholderia sp. YI23]
Length = 798
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 192/529 (36%), Positives = 285/529 (53%), Gaps = 21/529 (3%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P AE NLGV+ D+ LD+A Y+ A+S P+ +Q+ NNLG + G++ AAE+
Sbjct: 278 PDTAELHYNLGVLLGDQKRLDEAEAAYRNAISHDPDHAQAHNNLGRIVRDLGRLPEAAEI 337
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+ A+A P EA+NNL +D G+++ +I + + PD+ +N A+ Y
Sbjct: 338 LRHAVALRPDVGEAHNNLAATLKDMGAMAESIAEFRLAVDCAPDNECVHRNLNYALTYHA 397
Query: 149 EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
E + L E R + L + N++DP R + IGYV+PD+ H S F
Sbjct: 398 EDPHEILDECLRFAARHEAPLRPARVDYPNSRDPSRRVRIGYVAPDFNMHCQSMFTAPVF 457
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
HD+ +++V YS+ D T R KV +WRD++ + ++ +A +R+D+ID+L
Sbjct: 458 GAHDHAAFEIVCYSSTSDTDHITASMRAKV----DLWRDVHALSDEALAQRIRDDRIDVL 513
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP---PETKQKHV 325
V+LT H + + + A +PAPVQV W+GYP TTG I YR+TD DP P+ ++
Sbjct: 514 VDLTLHMSRGRPLLFARRPAPVQVQWLGYPGTTGSSAIRYRLTDPWIDPPGRPDVDARYS 573
Query: 326 EELIRLPECFLCYTPS------PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
E IRLPE F C P PE GP+ PAL +G ITFG NN K + + L +WA
Sbjct: 574 ERSIRLPETFWCVDPRVTTQRVPEVGPL---PALASGHITFGCLNNPCKASDRTLNMWAA 630
Query: 380 ILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMD 439
+L A P +RLV+ R R L LG++ R++ L + +++ Y +D
Sbjct: 631 VLAATPGARLVL----LSPHGARERAGERLGALGVDIARIEFLDYQPRD-AYLRTYDRID 685
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
I LDTFPY G TT+ ++L+MGVP + AG G+S L +GL L A ++ YV +
Sbjct: 686 IGLDTFPYNGHTTSLDALWMGVPVPSRAGETAVSRAGLSFLMNLGLGDLAAHDDAAYVDI 745
Query: 500 ALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+LA D+ LA+LR SLR + SP+ D F LE+ YR MW +C
Sbjct: 746 VSRLARDLPRLAHLRASLRARLEASPMMDAPRFTRHLEAAYRAMWQAWC 794
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG + + + A P AEA NLG + + + D+A ++ A++
Sbjct: 81 YNLGNLLNRLGRHEEGAAALLDALSVRPDFAEAHFNLGNLRRTQGRADEAERAFRAAIAA 140
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P ++++ NNLG + G+ D A + +A+ P +AE + NLG ++RDAG + A+
Sbjct: 141 RPAYAEACNNLGNLLRETGRTDEARAALRQAVVLRPDFAEGHLNLGHVWRDAGRWARALA 200
Query: 122 AYEQCLKIDPDSRNAGQNR 140
Y + + PD +A ++R
Sbjct: 201 HYRRACDLRPDHADAWRSR 219
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL +A G + A Y A P AEA NLG + ++ ALS++
Sbjct: 51 NLLLAQG---RLSDAETIYRQAIRLKPDFAEAHYNLGNLLNRLGRHEEGAAALLDALSVR 107
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+++ NLG + QG+ D A AIAA P YAEA NNLG L R+ G A A
Sbjct: 108 PDFAEAHFNLGNLRRTQGRADEAERAFRAAIAARPAYAEACNNLGNLLRETGRTDEARAA 167
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQY 173
Q + + PD A ++N GH RD G R+ R + Y
Sbjct: 168 LRQAVVLRPD---------FAEGHLNLGH------VWRDAG-RWARALAHY 202
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA 92
EACNNLG + ++ D+A + A+ ++P+F++ NLG V+ G+ A +A
Sbjct: 146 EACNNLGNLLRETGRTDEARAALRQAVVLRPDFAEGHLNLGHVWRDAGRWARALAHYRRA 205
Query: 93 IAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
P +A+A+ + + + A AY Q L +DP
Sbjct: 206 CDLRPDHADAWRSRAGVLSHQERFADAEAAYRQVLALDP 244
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
+ A +P A NLG + + L A Y+ A+ +KP+F+++ NLG + G
Sbjct: 32 WRRAIAEHPDIAGNYANLGNLLLAQGRLSDAETIYRQAIRLKPDFAEAHYNLGNLLNRLG 91
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
+ + A + A++ P +AEA+ NLG L R G
Sbjct: 92 RHEEGAAALLDALSVRPDFAEAHFNLGNLRRTQG 125
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + ++ A+ Y A P A+A + + ++ A Y+ L++
Sbjct: 184 NLGHVWRDAGRWARALAHYRRACDLRPDHADAWRSRAGVLSHQERFADAEAAYRQVLALD 243
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + L Q ++ A A+A P AE + NLGVL D + A A
Sbjct: 244 PGDAAARGALAYALHRQERIREAEAAYRAALALRPDTAELHYNLGVLLGDQKRLDEAEAA 303
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + DPD A N
Sbjct: 304 YRNAISHDPDHAQAHNN 320
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 55 YQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
++ A++ P+ + + NLG + QG++ A + +AI P +AEA+ NLG L G
Sbjct: 32 WRRAIAEHPDIAGNYANLGNLLLAQGRLSDAETIYRQAIRLKPDFAEAHYNLGNLLNRLG 91
Query: 115 SISLAIDAYEQCLKIDPD 132
A L + PD
Sbjct: 92 RHEEGAAALLDALSVRPD 109
>gi|117924934|ref|YP_865551.1| hypothetical protein Mmc1_1636 [Magnetococcus marinus MC-1]
gi|117608690|gb|ABK44145.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus marinus MC-1]
Length = 968
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 200/583 (34%), Positives = 294/583 (50%), Gaps = 41/583 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLGV + + A Y A N + EA NLG + L +A+ CYQ AL
Sbjct: 110 FNLGVVLAAQGRTEQAQSAYRKALALNENIPEAWLNLGNLLSRTGELQQALVCYQQALQR 169
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYR---------- 111
+P+F+Q+ L T + A ++E NP +AE G L R
Sbjct: 170 RPSFTQAGFGLANTLTTLKRHTEALTILEPLCQQNPDHAEMMILYGHLLRSQNRQHQARS 229
Query: 112 ------------------------DAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
D G LA+ +Q +++P + + A +Y+
Sbjct: 230 VFQRILAQQPNHFAARYGYATILLDLGRADLALPQMQQAARLNPSHQGLRSDLAFAQHYL 289
Query: 148 NEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNT-KDPERPLVIGYVSPDYFTHSVSYFIEA 206
+ L+ HR + SQ + K+P +PL IG+VS D+ H VS+F+EA
Sbjct: 290 STS-PKALYHEHRLFQTLIAEALSQQSMRHQPCKEPHKPLKIGFVSSDFRRHPVSFFLEA 348
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
P +HD +++ YS DA T R + WR+I+G+ + VA + D ID
Sbjct: 349 PFEHHDGESFAFYGYSNSPVRDATTQRLQGWAQA----WREIFGLTDSVVAQQIVADGID 404
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
ILV+L GHT N+L + A QPAPVQV+W+GYP+TTGL + YR+TD+++DP +++
Sbjct: 405 ILVDLNGHTGGNRLALFALQPAPVQVSWLGYPDTTGLEAMAYRLTDTISDPESEGGRYMS 464
Query: 327 EL-IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
E I LP F CY P EA V T + SFN L K+ +VL++WA IL +P
Sbjct: 465 ETPIYLPHGFHCYRPPDEAPKVLYQQLRTGQGVRLASFNTLTKMGHEVLRLWAEILTRLP 524
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
+ L++K F +V +L E LG++S R+ + + +H+ Y+ +DI+LDTF
Sbjct: 525 QATLLLKNGGFGSQAVVDDYLQRFESLGIDSKRIRCMGVTDTLEEHLNLYNQVDIALDTF 584
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
PY GTTTTCE+L+MGVP VT+ G H + VG SLL +VGL L+A ++V L + LA
Sbjct: 585 PYHGTTTTCEALWMGVPVVTLQGDHHVNRVGGSLLHQVGLHKLVASTPKQFVDLVVGLAQ 644
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
D L LR S+R M +P+ D F LE+ +R +W C
Sbjct: 645 DHKRLRTLRGSIRHKMQNAPLRDELGFTRNLENAFRQIWKMAC 687
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
+A G+ L+ A+ F+E A +P + LG +Y+ + L++AV+ + ++PN
Sbjct: 49 LAAGQPLQ---AVDFFERALALDPQHYPSILALGTLYQQQGRLERAVQLFLRGAQLQPNQ 105
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
NLGVV QG+ + A KA+A N EA+ NLG L G + A+ Y+Q
Sbjct: 106 PLVHFNLGVVLAAQGRTEQAQSAYRKALALNENIPEAWLNLGNLLSRTGELQQALVCYQQ 165
Query: 126 CLKIDPDSRNAG 137
L+ P AG
Sbjct: 166 ALQRRPSFTQAG 177
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 7 AYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS 66
AY + + AI Y+ +P A +G +AV+ ++ AL++ P
Sbjct: 13 AYLQQGQLQQAINSYQNLLAQHPESVAAWQGIGSALLAAGQPLQAVDFFERALALDPQHY 72
Query: 67 QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQC 126
S+ LG +Y QG+++ A ++ + P + NLGV+ G A AY +
Sbjct: 73 PSILALGTLYQQQGRLERAVQLFLRGAQLQPNQPLVHFNLGVVLAAQGRTEQAQSAYRKA 132
Query: 127 LKID 130
L ++
Sbjct: 133 LALN 136
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y + + + A+ + P+ NLGV+ + ++A Y+ AL++
Sbjct: 78 LGTLYQQQGRLERAVQLFLRGAQLQPNQPLVHFNLGVVLAAQGRTEQAQSAYRKALALNE 137
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA----YNNLGVLYRDAGSISL 118
N ++ NLG + + G++ A ++A+ P++ +A N L L R ++++
Sbjct: 138 NIPEAWLNLGNLLSRTGELQQALVCYQQALQRRPSFTQAGFGLANTLTTLKRHTEALTI 196
>gi|425460197|ref|ZP_18839679.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9808]
gi|389827192|emb|CCI21792.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9808]
Length = 1271
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 195/556 (35%), Positives = 295/556 (53%), Gaps = 14/556 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G + KF A YE+A F P E NL VI++ +D L +A+ Y+ L+
Sbjct: 431 LINTGNQWERRGKFLQAQNCYEMALEFEPSAIEPLFNLAVIFQQQDKLPEAIAYYRQVLT 490
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ PN +L N G+V G + A +K + + + A +L G I+ A+
Sbjct: 491 LDPNHIPALQNCGIVLDKIGYIHEAIAYYQKILTIDNDHLSALKSLASCAEKLGKIANAV 550
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW-----GKRFMRLYSQYTS 175
D + ++++P L + ++ ++ W K+ + +
Sbjct: 551 DYCHKIMQLEPHDCGNHSFLLWCFGALTIVSPQEILDSSYLWYIYHVVKQGLPTLKHHR- 609
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR 235
DP+ L IGY+SPD+ HS S+FI+ L H + +++ Y+ V K D T
Sbjct: 610 --RQPDPDSRLRIGYISPDFRRHSCSFFIKPLLENHHHDQFEIFAYAEVEKGDQIT---- 663
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
EK+ WR G+ + +VA +++ D+IDILV+L GHTA N+L ++ +PAP+Q T++
Sbjct: 664 EKIQATCDHWRCTVGLSDLEVAELIQADQIDILVDLAGHTAGNRLKVLGIKPAPIQATYL 723
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN 355
GY TTGLPTIDY ITD P +T + E + RLP C+L Y + V P P
Sbjct: 724 GYFATTGLPTIDYWITDEALHPLDTPELTSETIWRLPRCYLTYNNYLDTPAVSPLPFEKT 783
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC--KPFCCDSVRHRFLSTLEQLG 413
G ITFGS NN K+TP+ L VW +IL AVPNSRL +K + V+ ++ Q G
Sbjct: 784 GLITFGSLNNTRKLTPETLDVWCQILKAVPNSRLFLKAIHQAGVDPRVQENIINDFTQRG 843
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ + R+ + L + H +Y+ +DI LD FPY G TTTCE+L+MGVP +T+AG +
Sbjct: 844 ISADRLFIQGKFLDDQAHFSSYNNVDIHLDPFPYGGCTTTCEALWMGVPTLTLAGGRNME 903
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ V+LL VGL IA +EYVQ A+Q A D L+NLR ++RD +++S + D + A
Sbjct: 904 RLSVTLLKAVGLDEWIADTPEEYVQKAVQFAQDSAYLSNLRATMRDRLAESELLDAKGMA 963
Query: 534 LGLESTYRNMWHRYCK 549
+ES YR MW Y +
Sbjct: 964 ETMESAYRQMWQIYLE 979
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+L Y + A +Y A P E NLGV+ ++ DKAV C+Q + K
Sbjct: 1105 SLAQLYDRQENYAKAEKYYRCALLLQPDNLELRYNLGVVLYEQKKFDKAVSCFQKIIQAK 1164
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +LG+ Y Q + A EKAI +P YA AY NLGV+Y A+D
Sbjct: 1165 PQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGVVYSCQPDEKKAVDC 1224
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW 162
+ Q L+ DP ++ A L A++ I E +++++A W
Sbjct: 1225 FRQALRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRW 1264
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YNLG+ Y ++ + + AI Y + + E +L +Y ++N KA + Y+ AL
Sbjct: 1069 FYNLGLVYEQLEETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALL 1128
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P+ + NLGVV Q K D A +K I A P A AY +LG+ Y+ ++ A
Sbjct: 1129 LQPDNLELRYNLGVVLYEQKKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAK 1188
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+E+ +++DPD AM Y N G
Sbjct: 1189 SCFEKAIELDPD---------YAMAYYNLG 1209
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A FY A +P A++ +NLG + + L +A+ YQ A+ +P++ + NL
Sbjct: 1013 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLQEAISYYQQAIQSQPDYPTAFYNL 1072
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G+VY + + A ++ + T E Y +L LY + + A Y L + PD
Sbjct: 1073 GLVYEQLEETEKAIACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPD 1132
Query: 133 S 133
+
Sbjct: 1133 N 1133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+ LG T+ G++++A +AI +PTYA++Y+NLG L G + AI Y+Q ++
Sbjct: 1002 HQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLQEAISYYQQAIQS 1061
Query: 130 DPDSRNAGQNRLLAMNYINE 149
PD A N L + E
Sbjct: 1062 QPDYPTAFYNLGLVYEQLEE 1081
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 76/200 (38%), Gaps = 49/200 (24%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK-----DRDNLD----KAV 52
YNLGV + ++ AI +Y NP A+A LG+ K R+NL+ +A+
Sbjct: 315 YNLGVVNEKQQQWQSAIDYYRQGIRLNPQYAKAYYRLGLNLKQQLINQRENLEDEKKQAI 374
Query: 53 -----ECYQMALSIKPN-----------------------------------FSQSLNNL 72
EC L++ PN F L N
Sbjct: 375 TLEIGECLTQVLNLDPNHPSIKFQLAKFWQDQGESAKAKSLLTAKEWELLPDFVSYLINT 434
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + +GK A E A+ P+ E NL V+++ + AI Y Q L +DP+
Sbjct: 435 GNQWERRGKFLQAQNCYEMALEFEPSAIEPLFNLAVIFQQQDKLPEAIAYYRQVLTLDPN 494
Query: 133 SRNAGQNRLLAMNYINEGHD 152
A QN + ++ I H+
Sbjct: 495 HIPALQNCGIVLDKIGYIHE 514
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AE + LG + + + A Y A+ ++P QS NLGVV Q + +A + +
Sbjct: 277 AEIAHYLGNQFTQQGHFTLAQSWYLKAIELEPERYQSYYNLGVVNEKQQQWQSAIDYYRQ 336
Query: 92 AIAANPTYAEAYNNLGV 108
I NP YA+AY LG+
Sbjct: 337 GIRLNPQYAKAYYRLGL 353
>gi|390949283|ref|YP_006413042.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
gi|390425852|gb|AFL72917.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
Length = 972
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 294/561 (52%), Gaps = 25/561 (4%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+ ++ + + A Y A NP+ A+A NLG +++ +A+ECY+ AL+I+
Sbjct: 398 NAGLVLQDLGRLEEARAHYSQALSINPNLAQAHGNLGNYWQELKRCHEALECYRRALAIE 457
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+++ NN+G+V QG D A E E+A++ P Y +AY NLG + G A+D
Sbjct: 458 PRFAEAHNNMGLVLLEQGNFDEARERFEQALSIRPDYVDAYLNLGTCHGRVGRYDKALDC 517
Query: 123 YEQCLKIDPD--SRNAGQNR-----LLAMNYINEGHDDKLFEAHRDWGKRFMRLYS-QYT 174
+++ L+I PD + G + L +NY + ++++ A+R + F + +
Sbjct: 518 FDRALRISPDLATLKPGLVKVHNAFLFILNYHPDKSAEEIYAAYRAFDHAFGEPHRVGWR 577
Query: 175 SWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRF 234
+ N +D R L IGYVSPD+ HS F+E L HD +V Y+ + + D T R+
Sbjct: 578 AHANVRDSRRRLRIGYVSPDFRAHSARGFLEPLLANHDRNEIEVTAYAELTQEDEVTARY 637
Query: 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTW 294
R V + W G+ + +A +R D IDILV+L GHTANN+LG+ +PAPV V+W
Sbjct: 638 RGYVDR----WVATRGVSDDVLAERIRADGIDILVDLAGHTANNRLGVFVRRPAPVSVSW 693
Query: 295 -IGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL 353
+GY TTGL IDY + D PP ++ E+ RLP L Y P+ G PA
Sbjct: 694 MVGYGYTTGLSAIDYFLADEAMVPPGSEGLFAEQPWRLPVPALVYRPAERMGDAGALPAR 753
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
G ++F + + +I + ++VW+ +L +P +RL + K F + G
Sbjct: 754 DFGNLSFVTLSRAVRINHRTVRVWSALLQRLPGARLAIDSKDFETKRAQSDMCKRFAAHG 813
Query: 414 LESLRVDLL----PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
+ R+ + P LL H MDI LD FP+ TT ESLYMGVP VT+AG
Sbjct: 814 IAPERLLIGCHSPPWDLLRH--------MDIGLDCFPHNSGTTLIESLYMGVPFVTLAGR 865
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
+G ++L GL IA +EDEY++ A+ LASD+ LA LR LR + P D
Sbjct: 866 PSVGRIGSTMLAGAGLGEWIAHSEDEYIEKAVALASDLDRLAALRAGLRTRLEAGPWRDE 925
Query: 530 QNFALGLESTYRNMWHRYCKG 550
FA +E+ YR MW R+C G
Sbjct: 926 AGFARRVEAAYREMWRRWCAG 946
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Query: 10 EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL 69
E+ +F+ A Y A +P A A NLG + ++ +LD+A+E + AL I P++++
Sbjct: 337 ELGRFEEARDSYRRALAIDPANALAHTNLGNLLRELGHLDEALEHHAAALRIAPDYAEGY 396
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N G+V G+++ A +A++ NP A+A+ NLG +++ A++ Y + L I
Sbjct: 397 CNAGLVLQDLGRLEEARAHYSQALSINPNLAQAHGNLGNYWQELKRCHEALECYRRALAI 456
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFE 157
+P A N + + + +G+ D+ E
Sbjct: 457 EPRFAEAHNN--MGLVLLEQGNFDEARE 482
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG E +FD A+ Y A NP A ++LG+ + LD+A+ +A
Sbjct: 261 HNLGQVLAEQGRFDEAVASYRQAGLLNPDLAGLQHSLGLAFYRLGRLDEALASLSLAARS 320
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P+ + L++ G + G+ + A + +A+A +P A A+ NLG L R+ G + A++
Sbjct: 321 EPDQAGVLSDQGNILRELGRFEEARDSYRRALAIDPANALAHTNLGNLLRELGHLDEALE 380
Query: 122 AYEQCLKIDPD 132
+ L+I PD
Sbjct: 381 HHAAALRIAPD 391
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+ E + A V E A +P A N+LG +K LD A++ Y AL I P
Sbjct: 161 LGIVLLECGQARDAQVQLERALDLDPKDAAVLNSLGNAFKILGRLDDALDHYTRALRISP 220
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
F+++ NN G G ++ A + AIA +AEA++NLG + + G A+ +Y
Sbjct: 221 RFAEAHNNRGGTLLSLGHLEEALTSLRDAIALKADFAEAHHNLGQVLAEQGRFDEAVASY 280
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
Q ++PD AG L + + G D+
Sbjct: 281 RQAGLLNPDL--AGLQHSLGLAFYRLGRLDE 309
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
++LG+A+ + + D A+ LA P A ++ G I ++ ++A + Y+ AL+I
Sbjct: 295 HSLGLAFYRLGRLDEALASLSLAARSEPDQAGVLSDQGNILRELGRFEEARDSYRRALAI 354
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P + + NLG + G +D A E A+ P YAE Y N G++ +D G + A
Sbjct: 355 DPANALAHTNLGNLLRELGHLDEALEHHAAALRIAPDYAEGYCNAGLVLQDLGRLEEARA 414
Query: 122 AYEQCLKIDPDSRNAGQN 139
Y Q L I+P+ A N
Sbjct: 415 HYSQALSINPNLAQAHGN 432
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG A+ + + D A+ Y A +P AEA NN G +L++A+ + A++
Sbjct: 192 LNSLGNAFKILGRLDDALDHYTRALRISPRFAEAHNNRGGTLLSLGHLEEALTSLRDAIA 251
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+K +F+++ +NLG V QG+ D A +A NP A ++LG+ + G + A+
Sbjct: 252 LKADFAEAHHNLGQVLAEQGRFDEAVASYRQAGLLNPDLAGLQHSLGLAFYRLGRLDEAL 311
Query: 121 DAYEQCLKIDPD 132
+ + +PD
Sbjct: 312 ASLSLAARSEPD 323
>gi|196232796|ref|ZP_03131647.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196223256|gb|EDY17775.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 591
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 192/552 (34%), Positives = 299/552 (54%), Gaps = 14/552 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV D A+ + E A +P A +NLG +A+E Y+ AL+
Sbjct: 45 LHLLGVLAHNAGHHDDAVAWIERALLHHPTNPSAHSNLGEACLALGRTTEAIEHYRRALA 104
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ F+ + NLG + QG++D A +A+ + + Y+NL G + AI
Sbjct: 105 LDSRFAIASYNLGNAFRAQGRLDEAVAAYRRALQLDSNDPKGYSNLASTLAVLGRLDDAI 164
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK-LFEAHRDWGKRFMR-LYSQYTSWDN 178
AY + +++ P + Q+ L+ + ++ G D++ + + H++W ++F L N
Sbjct: 165 AAYREAIRLMPQEPSI-QSSLICLLRLHPGSDEQAIVDEHQNWNRQFAEPLRPSLRPHTN 223
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
+ P R L IGYVSPD+ H+ F+ HD+ +++ YS+VV DA T E +
Sbjct: 224 HRVPHRRLRIGYVSPDFRIHAELLFLAPLFGEHDHTQFEIHCYSSVVAPDAGT----EFL 279
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ +W D+ + + ++A +R +IDILV+L+ HT N+L + A +PAPVQV+W+ YP
Sbjct: 280 RARADVWHDVRHLSDAELATEIRAAQIDILVDLSMHTVGNRLPLFARKPAPVQVSWLAYP 339
Query: 299 NTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
TGL TIDYRITD DP + E+ I LP+C+ CY P + PV P PAL+ G
Sbjct: 340 GITGLDTIDYRITDRYLDPSADLDFTSAEKPILLPDCWCCYHPFTDETPVNPVPALSAGR 399
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLS-TLEQLGLES 416
ITFG FNN +K + L ++R+L +V NS LV+ + R LS G+
Sbjct: 400 ITFGCFNNFSKFNEETLARFSRVLHSVKNSHLVL----LAPEGSAQRHLSERFAHYGIAG 455
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R++ D+++ Y +DI+LDT P G TTCE+L+MGVP +++ G G
Sbjct: 456 DRIEFAA-TGSRADYLRRYHRVDIALDTLPSNGMATTCETLWMGVPVISLVGETSVGRAG 514
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+ LL+ +GL L+ + DE+V A QLA+D+ LA+LR ++R M SP+ D FA L
Sbjct: 515 LGLLSTIGLPELVTRTPDEFVSTATQLATDLPRLADLRATMRSRMESSPLMDAPRFARHL 574
Query: 537 ESTYRNMWHRYC 548
E+ YR MWHR+C
Sbjct: 575 EAAYREMWHRWC 586
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
NL +A + LS++PN +++L+ LGV+ G D A IE+A+ +PT A++NL
Sbjct: 23 NLGQAETLCRQILSVQPNHAEALHLLGVLAHNAGHHDDAVAWIERALLHHPTNPSAHSNL 82
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
G G + AI+ Y + L + DSR A + L + +G D+ A+R
Sbjct: 83 GEACLALGRTTEAIEHYRRALAL--DSRFAIASYNLGNAFRAQGRLDEAVAAYR 134
>gi|357635838|ref|ZP_09133715.1| transcriptional activator domain protein [Desulfovibrio sp.
FW1012B]
gi|357580678|gb|EHJ46012.1| transcriptional activator domain protein [Desulfovibrio sp.
FW1012B]
Length = 788
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 199/539 (36%), Positives = 295/539 (54%), Gaps = 9/539 (1%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A V E A +AC NLG +++ R + A CY+ AL+I P F+ ++ NL
Sbjct: 254 RIEEAWVEGERAVLTGAPLPDACLNLGNVHRARGDAVTAELCYRRALAIHPGFATAVYNL 313
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
GV+ G+ AA + + + + + + NLGV+ G + A+ A + + PD
Sbjct: 314 GVLAQENGRFGAAEALYRQCLGLDAHRPDVHGNLGVVQNILGRPTEALAALQTADALGPD 373
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVS 192
+ + N LL + + ++L H +G+RF + + ++D + L IGYVS
Sbjct: 374 NPHTLSNILLTALHCDTLGQEELTRLHFSFGERFEKPAAAPAR--RSRDGK--LRIGYVS 429
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ HSV+YF++ +HD + ++V Y A D T R + + WRDI +
Sbjct: 430 SDFKRHSVAYFLQELWRHHDRERFQVHAYHAFPGNDDMTERLKSLADQ----WRDIAALS 485
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD 312
+ + AA VRED IDIL++L GHT+ N+L + A +PAPVQVT++GYP TTGL +D R+TD
Sbjct: 486 DAQAAACVREDGIDILIDLGGHTSGNRLPLFAQRPAPVQVTYLGYPATTGLRHMDVRLTD 545
Query: 313 SLADPP-ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITP 371
LADPP +T++ + E L LP FLCY P A V P G +TFGSFN LAK++
Sbjct: 546 ELADPPGQTQEAYTERLEYLPAPFLCYCPPAGAPDVAEPPMGGTGAVTFGSFNKLAKLSD 605
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
L +W IL A+P + L +K R + GL R+ LLP +H
Sbjct: 606 TTLALWKEILAALPRATLRIKDIALSDPGCRAALAERCARAGLPMDRLALLPGSPTRQEH 665
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
+ Y +DI+LDTFPY GTTTTCE+L+MGVP VT+ G H VG+S+L+ + A
Sbjct: 666 LSQYGTIDIALDTFPYHGTTTTCEALWMGVPVVTLIGEQHHSRVGLSVLSSLDATAWAAT 725
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
++ +Y+ A+ LASD AL +R SLR+ M +SP+ DG+ A LE +W R G
Sbjct: 726 DKADYIGKAVALASDPAALRAIRHSLRETMRRSPLLDGRRLARDLEKALETIWERSPAG 784
>gi|196232458|ref|ZP_03131311.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196223530|gb|EDY18047.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 747
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/548 (34%), Positives = 295/548 (53%), Gaps = 13/548 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G A E+ +F+ A+ Y A P AE NLG +++ D+A+ Y+ AL+++
Sbjct: 213 NFGNACKELGQFESAVAAYRRAVELRPDSAEFQANLGNGLREQGRFDEAMAAYRHALALQ 272
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +++ + +G QG++DAA + P Y A NLG + RD G + AI A
Sbjct: 273 PKRAETHHEMGNALAGQGQLDAAVLAYRATLELKPDYGVARCNLGNVLRDQGMLDEAIAA 332
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
Y + + A N + ++Y +G++ ++ W +RF + N D
Sbjct: 333 YRRAAESKSAQLVAQSNLIYTLHYHADGNEGEIRREQCLWNERFGGDTRPAVRYSNEPDF 392
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
R L IGYVSP++ H + HD +++ YS VV+ D T +FRE+V
Sbjct: 393 HRRLRIGYVSPEFRDHVTGRNLWPLFKEHDRTAFEIFCYSGVVRPDGMTQQFRERVDH-- 450
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WR G+ ++++A V+ D +DILV+LT H N+L M +PAPVQ+++ GYP TG
Sbjct: 451 --WRSTLGVSDEELAEWVQRDGVDILVDLTQHMDGNRLAMFGRRPAPVQLSFAGYPEATG 508
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+ I YRI+D +P T+ + L+R+ + + CY P V P NG++TFG
Sbjct: 509 VEAIPYRISDRFLEPHSTEDR----LLRI-DSYWCYDPCGAEIGVNELPVQRNGWVTFGC 563
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
N+ K+ L+ WA++L V +S+L++ S R + LE G+E+ RV+ +
Sbjct: 564 LNHFCKVNEPTLRRWAKVLRTVRDSKLMLLSPE---GSHRRKTWRILESEGVEARRVEFV 620
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P +++ Y MD++LDTFPY G TT+ ++L+MGVP V++AG G+S L+
Sbjct: 621 PRCG-RRAYLELYQQMDVALDTFPYNGHTTSLDALWMGVPVVSLAGRSAVSRAGLSQLSN 679
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+GL L+A EDE+V++A LA D++ LA+LR +LR M S + D F G+ES YR
Sbjct: 680 LGLAELVASAEDEFVEIAAALAQDLSRLADLRRTLRARMEASVLMDAIRFTRGIESAYRQ 739
Query: 543 MWHRYCKG 550
MW R+C+G
Sbjct: 740 MWQRWCEG 747
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG AY + KF+ A+ + A P A NLG + + L++A+ Y+ L++K
Sbjct: 77 NLGEAYRGLGKFEEAVASFRRALQLKPDDVLAQYNLGNVLVEWGKLEEAIAAYRRVLTLK 136
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ + NNLG+ QG M A E++ +A+ P A A+NN G++ + G A++A
Sbjct: 137 PDYVDAHNNLGIALARQGVMTEATEVLRRALQLAPADAGAWNNFGIVLAEQGRFGEAVEA 196
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 197 YRRALELAPNQPEAHNN 213
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG E K + AI Y P +A NNLG+ + + +A E + AL +
Sbjct: 110 YNLGNVLVEWGKLEEAIAAYRRVLTLKPDYVDAHNNLGIALARQGVMTEATEVLRRALQL 169
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P + + NN G+V QG+ A E +A+ P EA+NN G ++ G A+
Sbjct: 170 APADAGAWNNFGIVLAEQGRFGEAVEAYRRALELAPNQPEAHNNFGNACKELGQFESAVA 229
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
AY + +++ PDS N L +G D+ A+R
Sbjct: 230 AYRRAVELRPDSAEFQAN--LGNGLREQGRFDEAMAAYR 266
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+A A A P A A NN G++ ++ +AVE Y+ AL +
Sbjct: 145 NLGIALARQGVMTEATEVLRRALQLAPADAGAWNNFGIVLAEQGRFGEAVEAYRRALELA 204
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN ++ NN G G+ ++A +A+ P AE NLG R+ G A+ A
Sbjct: 205 PNQPEAHNNFGNACKELGQFESAVAAYRRAVELRPDSAEFQANLGNGLREQGRFDEAMAA 264
Query: 123 YEQCLKIDP 131
Y L + P
Sbjct: 265 YRHALALQP 273
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 2/160 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGVA + + ++A+ P+ +NLG Y+ ++AV ++ AL
Sbjct: 41 LHLLGVAAMQTGRAELAVNLLNRVAALVPNHPAVHSNLGEAYRGLGKFEEAVASFRRALQ 100
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KP+ + NLG V GK++ A + + P Y +A+NNLG+ G ++ A
Sbjct: 101 LKPDDVLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKPDYVDAHNNLGIALARQGVMTEAT 160
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+ + L++ P A N + +G + EA+R
Sbjct: 161 EVLRRALQLAPADAGAWNN--FGIVLAEQGRFGEAVEAYR 198
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A+ LG+ + L +A CY+ L +P+ +L+ LGV G+ + A ++ +
Sbjct: 4 AQQVLELGLQHHQAGRLAEAEACYREILEAQPDHLDALHLLGVAAMQTGRAELAVNLLNR 63
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A P + ++NLG YR G A+ ++ + L++ PD
Sbjct: 64 VAALVPNHPAVHSNLGEAYRGLGKFEEAVASFRRALQLKPD 104
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+ + + + A Y P +A + LGV + AV ++ P
Sbjct: 10 LGLQHHQAGRLAEAEACYREILEAQPDHLDALHLLGVAAMQTGRAELAVNLLNRVAALVP 69
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N +NLG Y GK + A +A+ P A NLG + + G + AI AY
Sbjct: 70 NHPAVHSNLGEAYRGLGKFEEAVASFRRALQLKPDDVLAQYNLGNVLVEWGKLEEAIAAY 129
Query: 124 EQCLKIDPDSRNAGQNRLLAM 144
+ L + PD +A N +A+
Sbjct: 130 RRVLTLKPDYVDAHNNLGIAL 150
>gi|196232229|ref|ZP_03131083.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196223597|gb|EDY18113.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 701
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 306/582 (52%), Gaps = 40/582 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + + AI Y A P AE +NL + + + LD+A+ + A+ +K
Sbjct: 120 NLGNNFNAQGRLEEAITAYRQALQLEPGFAEIHSNLATVLRRKGALDEAIATLRRAIELK 179
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++ + NNLG ++ A +++AIA P A A+NNLG Y+ G + AI +
Sbjct: 180 PTYAMAYNNLGHALLDNRQVPEAIAALQQAIALQPDLALAHNNLGTAYKSLGQVDEAIAS 239
Query: 123 YEQCLKIDPD----------------------------------SRNAGQNRLLAMNYIN 148
Y + L DP S A N L +++
Sbjct: 240 YRRALDRDPTQVLALTNLANELDQIGERAASLALYERAIASPRCSSAAHSNYLAVLHFGA 299
Query: 149 EGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAP 207
E K+ EAH + +RF L + + ++++P R L +G++SP + H V +F+ P
Sbjct: 300 EMTLAKIAEAHAAYDRRFAEPLRASWQPHTHSREPNRKLRLGFLSPYFGIHPVGFFLVRP 359
Query: 208 LVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
L D +++V Y K D T R R W ++G + ++A +RED+IDI
Sbjct: 360 LENLDRSQFEIVCYHDGTKDDPLTARLRACATD----WHGVHGNSDGQLAQRIREDQIDI 415
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
L +L GHTA N+L + A +PAP+Q+TW+ Y TTGL +DY + D+ PE + + E
Sbjct: 416 LFDLAGHTAGNRLLLFARKPAPIQITWLDYVGTTGLAAMDYIVADARQILPEAEPFYRER 475
Query: 328 LIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
++R+P+ ++C+ P EA PV P PA NGF+TF S+N + K T + +++W+RIL +P +
Sbjct: 476 VLRMPDDYICFDPPLEAPPVGPLPAAANGFVTFASYNIVPKTTGQTIELWSRILRELPEA 535
Query: 388 RLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY 447
RL + + F + R + ++ R+ + + + + AY+ DI+LDT PY
Sbjct: 536 RLTLGNRGFGTPAAVERVRKRFAERAIDPSRI-IFQGWVPRAELLAAYNQADIALDTLPY 594
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G TTCE+++MGVP VT G A G++ LT G+ IA++ D+YV++A+ LA D+
Sbjct: 595 NGGLTTCEAMWMGVPVVTCPGETFASRHGLAHLTAAGVPETIARDPDDYVKIAVDLARDL 654
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
LA LR LR+ ++ SP+CDG+ FA + R+ W R+C+
Sbjct: 655 PRLATLRAGLREKLASSPLCDGERFAKNFGTLLRSAWRRWCQ 696
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
N+LG +++ + +A CY+ AL ++P + NNLG + QG+++ A +A+
Sbjct: 85 NDLGDVWQSQARYAEAEGCYRQALRLQPRSAPIQNNLGNNFNAQGRLEEAITAYRQALQL 144
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
P +AE ++NL + R G++ AI + +++ P AM Y N GH
Sbjct: 145 EPGFAEIHSNLATVLRRKGALDEAIATLRRAIELKPT---------YAMAYNNLGH 191
>gi|196229049|ref|ZP_03127915.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196227330|gb|EDY21834.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 725
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 303/555 (54%), Gaps = 15/555 (2%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
++LGV + K D AI Y A +P A+A +NLG DR + D A+ + AL++
Sbjct: 180 FDLGVVLTQQEKLDEAIAAYRRAIEIDPQFAQAHHNLGAALVDRGDWDAAMAALRQALAL 239
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+ ++ ++ NLG G++D A +AI P Y EA+NNLG + G A+
Sbjct: 240 QSDYVEAHYNLGNALRGAGRLDEARAAYHRAIELRPDYMEAHNNLGNACKAQGRGDEALA 299
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTK 180
A+ + + S N + ++Y+ ++ E HR W +RF + + N +
Sbjct: 300 AFRRAAECPGASAGVFSNLISLLHYLPGVGAHEIAEEHRRWNRRFSDPVTPSVRAHANDR 359
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+ R L IGYVSPD H++ + ++++++V+ YS V+ D +T FR +
Sbjct: 360 NGGRRLRIGYVSPDLRDHTLGRNLLPLFRNRNHEDFEVICYSEVLHPDERTAEFRGLADQ 419
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
WR+I +++VA M+R+D++DILV+L HTA N+L + A +PAPVQV++ GYP +
Sbjct: 420 ----WREISRESDERVAEMIRQDEVDILVDLALHTAGNRLPVFAREPAPVQVSFAGYPGS 475
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
G+ I RI+D+ + K E + L + F CY P PV PA G +TF
Sbjct: 476 AGVDAIRCRISDAYLEGGVEKNAGSWERVYLIDSFWCYDPCGMEVPVNALPAAETGRVTF 535
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
S NN KI +L++WAR+L AV +SRL++ P S R R L + G+ R++
Sbjct: 536 ASLNNYTKINEPLLKLWARVLAAVADSRLLLLSPP---GSHRERVLEIMRAEGVREQRIE 592
Query: 421 LL---PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
+ P ++++ Y +D+ LD FPY G TT+ ++L+MGVP V+ AG G+
Sbjct: 593 FVAEGP----RREYLERYHRVDVMLDPFPYNGHTTSLDALWMGVPVVSRAGEAVVSRGGL 648
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L+ +GL+ L+A +E+EYV++A LA DV LA LR +LR M S + DG FA G+E
Sbjct: 649 SQLSNLGLRELVAFSEEEYVKIAAGLAGDVPRLAELRKTLRPRMEASVLMDGARFARGIE 708
Query: 538 STYRNMWHRYCKGDV 552
+ +R MW +C+G+V
Sbjct: 709 NAFRAMWREWCEGEV 723
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+A + + AI H P +A NL ++ LD+A Y++ L +
Sbjct: 113 NLGLALRQNGQIGEAIEALRQGIHLLPDHLDAHRNLAACLAEQGRLDEANAHYRLVLRRR 172
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + S +LGVV T Q K+D A +AI +P +A+A++NLG D G A+ A
Sbjct: 173 PDAADSWFDLGVVLTQQEKLDEAIAAYRRAIEIDPQFAQAHHNLGAALVDRGDWDAAMAA 232
Query: 123 YEQCLKIDPD 132
Q L + D
Sbjct: 233 LRQALALQSD 242
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG AY + +F AI Y A NP A NLG+ + + +A+E + + +
Sbjct: 79 NLGEAYRALGRFAEAIEAYRAALRHNPQFGAAYANLGLALRQNGQIGEAIEALRQGIHLL 138
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + NL QG++D A + P A+++ +LGV+ + AI A
Sbjct: 139 PDHLDAHRNLAACLAEQGRLDEANAHYRLVLRRRPDAADSWFDLGVVLTQQEKLDEAIAA 198
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + ++IDP A N L ++ G D A R
Sbjct: 199 YRRAIEIDPQFAQAHHN--LGAALVDRGDWDAAMAALR 234
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L + + E + A Y +P+ AE + LGVI + +AV + AL +
Sbjct: 12 LAIQHHEAGQLREAEGIYRQILTVDPNHAEVHHLLGVIAHQCERESEAVNWIRRALELGL 71
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ + +NLG Y G+ A E A+ NP + AY NLG+ R G I AI+A
Sbjct: 72 VSASAWSNLGEAYRALGRFAEAIEAYRAALRHNPQFGAAYANLGLALRQNGQIGEAIEAL 131
Query: 124 EQCLKIDPDSRNAGQN 139
Q + + PD +A +N
Sbjct: 132 RQGIHLLPDHLDAHRN 147
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGV + + A+ + A A A +NLG Y+ +A+E Y+ AL P
Sbjct: 46 LGVIAHQCERESEAVNWIRRALELGLVSASAWSNLGEAYRALGRFAEAIEAYRAALRHNP 105
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
F + NLG+ G++ A E + + I P + +A+ NL + G + A Y
Sbjct: 106 QFGAAYANLGLALRQNGQIGEAIEALRQGIHLLPDHLDAHRNLAACLAEQGRLDEANAHY 165
Query: 124 EQCLKIDPDS 133
L+ PD+
Sbjct: 166 RLVLRRRPDA 175
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
L + + + L +A Y+ L++ PN ++ + LGV+ + A I +A+
Sbjct: 12 LAIQHHEAGQLREAEGIYRQILTVDPNHAEVHHLLGVIAHQCERESEAVNWIRRALELGL 71
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145
A A++NLG YR G + AI+AY L+ +P A N LA+
Sbjct: 72 VSASAWSNLGEAYRALGRFAEAIEAYRAALRHNPQFGAAYANLGLALR 119
>gi|302878310|ref|YP_003846874.1| hypothetical protein Galf_1080 [Gallionella capsiferriformans ES-2]
gi|302581099|gb|ADL55110.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 963
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/580 (33%), Positives = 304/580 (52%), Gaps = 40/580 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV + + D A A +P A+A NNLG L A +CY AL I+
Sbjct: 387 NLGVVLQSLGRADEAAASLIQAVQLHPDRADAHNNLGHTLHGMGRLADAADCYLRALQIQ 446
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMI--------------------------------- 89
P F+Q+ +NLG VQG++D A +
Sbjct: 447 PEFAQAYSNLGFTRLVQGRLDEARAALNCALKINDRLADAHCNLGITLMELGLLAEAEAS 506
Query: 90 -EKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
++AIA P +A A++NLG++ G ++ A D++ + L++ PD +A N + A++ +
Sbjct: 507 CQRAIALKPDFAVAHSNLGIIVMGMGRLADAADSFNRALQLRPDFCDAHSNLIFALDMTD 566
Query: 149 EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
L R W Q+ + N +DPER L +GYVS D+ HS +Y A L
Sbjct: 567 SSDIAALQAVRRQWNVAHAASLHQHRAHLNGRDPERRLRVGYVSADFRGHSAAYAFGAML 626
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
V+ D +++ V+ YS K DA T FR+ V +WR+I+G+ + VA +VREDKIDIL
Sbjct: 627 VHFDGESFDVIAYSNSAKQDAMTEVFRQGV----SVWRNIFGLSDDAVADLVREDKIDIL 682
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V+L+GH+A N+L A +PAPVQ+T GY TG+ +D +D + PP K+ +VE++
Sbjct: 683 VDLSGHSAGNRLLAFARKPAPVQITAWGYATGTGMSAMDVFFSDPVFVPPAEKELYVEQV 742
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP C L + ++ + PAL+ ITFGSFN L K + WA+IL A+P SR
Sbjct: 743 RYLP-CALGTFFTHDSAVINALPALSGAGITFGSFNRLVKNSDATYAAWAKILRALPESR 801
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
+++K + R R ++ + G+ + R+ LL H+ A++ +DI+LD FP+
Sbjct: 802 MIIKTEALDDPVTRERVIACFVRAGIAADRI-LLQGKTARDQHLAAFNQIDIALDPFPHG 860
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G T E L MGVP VT+ A + S+LT +GL IA+ + +Y++LA+Q A +V
Sbjct: 861 GGVTAMEGLMMGVPVVTLRWPTIAGRLSASILTTLGLTDWIAETQQQYIELAIQKAGEVQ 920
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+LA LR +L + + S + D + +E YR +W +C
Sbjct: 921 SLAALRKALPVIWANSMIGDQARYVSCVEREYRLLWQEWC 960
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 12/161 (7%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P EA NLG+ +DR L ++ CY+ AL I+P+++Q+ +NLGVV G
Sbjct: 337 YRRALELCPDYVEALCNLGITLQDRGQLAESESCYRQALVIRPDYAQAYSNLGVVLQSLG 396
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN- 139
+ D AA + +A+ +P A+A+NNLG G ++ A D Y + L+I P+ A N
Sbjct: 397 RADEAAASLIQAVQLHPDRADAHNNLGHTLHGMGRLADAADCYLRALQIQPEFAQAYSNL 456
Query: 140 --RLLAMNYINEGH---------DDKLFEAHRDWGKRFMRL 169
L ++E +D+L +AH + G M L
Sbjct: 457 GFTRLVQGRLDEARAALNCALKINDRLADAHCNLGITLMEL 497
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 76/129 (58%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+A+ + + + A+ + +P+ A+A NLGV+ KD L +A+ + A+ IKP
Sbjct: 184 LGLAFKQAGRDEDALPAMQKTAALSPNDAQAHGNLGVVLKDMGRLQEALASLRRAIKIKP 243
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++Q+ NLG + + AA+ + +A+ +P YA+A+NNLG++ D G + A +Y
Sbjct: 244 DYAQAHCNLGATLKDLQRPEEAAKSLRRALQLSPDYADAHNNLGLVLDDLGVLQEAQASY 303
Query: 124 EQCLKIDPD 132
+ L I+P+
Sbjct: 304 RRALAINPN 312
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ + + A A +P A+A NNLG++ D L +A Y+ AL+I
Sbjct: 251 NLGATLKDLQRPEEAAKSLRRALQLSPDYADAHNNLGLVLDDLGVLQEAQASYRRALAIN 310
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN Q +NLG V QG + A +A+ P Y EA NLG+ +D G ++ +
Sbjct: 311 PNLFQVHSNLGNVQRAQGLLTEAEASYRRALELCPDYVEALCNLGITLQDRGQLAESESC 370
Query: 123 YEQCLKIDPDSRNAGQN 139
Y Q L I PD A N
Sbjct: 371 YRQALVIRPDYAQAYSN 387
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV +M + A+ A P A+A NLG KD ++A + + AL +
Sbjct: 217 NLGVVLKDMGRLQEALASLRRAIKIKPDYAQAHCNLGATLKDLQRPEEAAKSLRRALQLS 276
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NNLG+V G + A +A+A NP + ++NLG + R G ++ A +
Sbjct: 277 PDYADAHNNLGLVLDDLGVLQEAQASYRRALAINPNLFQVHSNLGNVQRAQGLLTEAEAS 336
Query: 123 YEQCLKIDPD 132
Y + L++ PD
Sbjct: 337 YRRALELCPD 346
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ ++ A Y A NP+ + +NLG + + + L +A Y+ AL +
Sbjct: 285 NLGLVLDDLGVLQEAQASYRRALAINPNLFQVHSNLGNVQRAQGLLTEAEASYRRALELC 344
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ ++L NLG+ +G++ + +A+ P YA+AY+NLGV+ + G A +
Sbjct: 345 PDYVEALCNLGITLQDRGQLAESESCYRQALVIRPDYAQAYSNLGVVLQSLGRADEAAAS 404
Query: 123 YEQCLKIDPDSRNAGQN 139
Q +++ PD +A N
Sbjct: 405 LIQAVQLHPDRADAHNN 421
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K AI L P A LG+ +K + A+ Q ++ PN +Q+ NL
Sbjct: 159 KLAEAIALARLMTAHFPRHPFAWKVLGLAFKQAGRDEDALPAMQKTAALSPNDAQAHGNL 218
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
GVV G++ A + +AI P YA+A+ NLG +D A + + L++ PD
Sbjct: 219 GVVLKDMGRLQEALASLRRAIKIKPDYAQAHCNLGATLKDLQRPEEAAKSLRRALQLSPD 278
Query: 133 SRNAGQNRLLAMN 145
+A N L ++
Sbjct: 279 YADAHNNLGLVLD 291
>gi|294932357|ref|XP_002780232.1| o-linked n-acetylglucosamine transferase, ogt, putative [Perkinsus
marinus ATCC 50983]
gi|239890154|gb|EER12027.1| o-linked n-acetylglucosamine transferase, ogt, putative [Perkinsus
marinus ATCC 50983]
Length = 869
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/527 (37%), Positives = 295/527 (55%), Gaps = 44/527 (8%)
Query: 53 ECYQM-------------ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI--AANP 97
ECY++ A+ + P+ + L+ LG +Y V G+ +EK++
Sbjct: 336 ECYRLLDDWADCKTAMVKAVDLDPSNKEYLHRLGAIYGVAGRD------LEKSVNLCKIS 389
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFE 157
AEA+N G+ RD G AI ++E CLK +PD R+A +RL+++NY+ + D L+
Sbjct: 390 GEAEAFNTAGIFLRDIGLTRSAIASFEDCLKAEPDHRHASHSRLMSLNYLPQ-RDGGLWV 448
Query: 158 A--HRDWGKRFMRLYSQ-------YTSWDNTKDP--ERPLVIGYVSPDYFTHSVSYFIEA 206
A HR WG+ + ++ +++ + K+P + IGYVSPD HSVSYF++
Sbjct: 449 AKEHRKWGESVVARVAKEVDSKTIFSAAVSRKNPAGSGKIRIGYVSPDLRGHSVSYFVDG 508
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI-WRDIYGIDEKKVAAMVREDKI 265
H+ +V Y DA T R R + + W D++ +D++++A + ED I
Sbjct: 509 LFRCHNPAKVEVYAYHDSAVNDAVTRRLRGYIERHSEWKWVDVHDMDDRQLARQIWEDHI 568
Query: 266 DILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK-QKH 324
D+LV+L GH+ NN+L + A +PAP VT+IGYPNTTGLP +D+R+ D + DP E+ +
Sbjct: 569 DVLVDLAGHSGNNRLLVFAVKPAPCTVTYIGYPNTTGLPNMDFRLVDEVTDPIESSGNGY 628
Query: 325 VEELIRLPECFLCYTPSPEAGPVCPTPA---LTNGFITFGSFNNLAKITPKVLQVWARIL 381
E+L+RLP CFLCY P PE P C A T G TFGSFN LAK++ ++VWA+IL
Sbjct: 629 SEQLVRLPHCFLCYIP-PENVPECVLEAPQRRTGGTATFGSFNTLAKLSDDTVRVWAQIL 687
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
VPNSRL++K K R + G+ S R+DLL + H+ Y +D+
Sbjct: 688 REVPNSRLMLKSKALASTVAVERLNRLFAEEGVPSTRLDLLGMTPSTSTHLGMYGEIDVC 747
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMA--GSVHAHNVGVSLLTKVGLKH---LIAKNEDEY 496
LD +PYAGTTT+ E+++MGVP VT+A G+ H+ V SL VG + +A +E+EY
Sbjct: 748 LDPWPYAGTTTSAEAMFMGVPVVTLALKGACHSQRVTASLARAVGRDYEIATVATSEEEY 807
Query: 497 VQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
+ A +LA +V L R LR LM++ P+CD + + +E M
Sbjct: 808 IAKAKKLAENVGDLEKWRRELRRLMAEGPLCDAKKHTIEVEEAVEKM 854
>gi|288941663|ref|YP_003443903.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
gi|288897035|gb|ADC62871.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
Length = 632
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 187/508 (36%), Positives = 279/508 (54%), Gaps = 17/508 (3%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
D ++A +C++ ALS + + NLG + + G++D A ++ K++ NPTYAEAY+N
Sbjct: 131 DRAEEARKCFERALSANQSQPEVYCNLGALLSQLGQLDEAVDLQRKSLELNPTYAEAYSN 190
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165
LG +D G + A+DA E+ +++P S NRL A+NY + + +F+++++
Sbjct: 191 LGHALQDLGRVDEALDALEKATQVNPHSAVLFSNRLYALNYHPDKTAEDIFKSYQE---- 246
Query: 166 FMRLYS--QYTSW---DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVV 220
F RL+ SW N +DPER L IGYVS D+ +H + Y +E L H + +++
Sbjct: 247 FDRLFGLPHRASWIPHSNDRDPERRLRIGYVSADFGSHVIGYHLEPLLANHSREQFEITA 306
Query: 221 YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKL 280
Y+ V +D T R+R + W + ++ +A +R D IDIL++L GHT+ N+L
Sbjct: 307 YTERVGSDGLTARYRRLIDH----WVPTKELTDEVMAERIRSDGIDILIDLAGHTSGNRL 362
Query: 281 GMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP 340
G+ A +PAPV VTW+GY TTGL IDY +TD++ PP ++ E++ + Y P
Sbjct: 363 GVFARRPAPVAVTWMGYGYTTGLSAIDYFLTDAVMTPPGSEHLFAEQIWHVDCPVGTYRP 422
Query: 341 SPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS 400
+P+ G V P PALTNG +TFG+ +I +V++VW+ IL +P SRLVV K F ++
Sbjct: 423 APDMGEVGPLPALTNGTVTFGTLTRGIRINHRVVRVWSDILRRLPGSRLVVDNKSFVTET 482
Query: 401 VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG 460
+ R G+E R+ +I + DISLD FP+ TT ESLYMG
Sbjct: 483 AQARLAEQFAAHGIERERL----IIGYHSPPWDVLRSTDISLDCFPHNSGTTLVESLYMG 538
Query: 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDL 520
VP +T+A G + L V IA E EYV A+ LASD+ LA +R LR
Sbjct: 539 VPFITLAARPSVGRSGSTALIAVDHPEWIATTEAEYVDKAIALASDIERLATIRAGLRAE 598
Query: 521 MSKSPVCDGQNFALGLESTYRNMWHRYC 548
SP D F +E YR MW R+C
Sbjct: 599 FEASPWRDESGFTRRVEQAYREMWRRWC 626
>gi|302878313|ref|YP_003846877.1| hypothetical protein Galf_1083 [Gallionella capsiferriformans ES-2]
gi|302581102|gb|ADL55113.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 750
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 191/556 (34%), Positives = 298/556 (53%), Gaps = 11/556 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ + + D A Y A NP A+ NNLGV ++ ++A Y+ A+ I
Sbjct: 202 YNLGLILQALGQLDEAAASYRRALQLNPDYAQGYNNLGVTLQELGKFEEAEASYRRAVLI 261
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP++ + +NLG+V + D A + K + NP Y EA+ NLG++ G A+
Sbjct: 262 KPDYLNAYHNLGIVLQCLSRFDEAEAIHRKILQLNPDYPEAHCNLGIVLLSLGKNDEAVK 321
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
+ + L++ PD A N + ++ + +L + + W +R + Q NT+
Sbjct: 322 CFRRALQLKPDFVVAHSNLIFCLDMASSADLSELLQERKRWDERHAARFLQAAPHSNTRS 381
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKVMK 240
P+R L IGYVS D+ HS S A L +D + ++V YS D + R FRE V
Sbjct: 382 PDRLLRIGYVSADFRNHSASKAFGAMLTRYDRRQFEVFAYSNYKGEDDRYTRLFRENVTG 441
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
WR+I + ++ ++R+D IDILV+L+GH+A N+L + A +PAPVQ+T GY
Sbjct: 442 ----WRNISAMSDEAATQLIRDDLIDILVDLSGHSAGNRLLIFARKPAPVQITAWGYAAG 497
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY--TPSPEAGPVCPTPALTNGFI 358
TG+ +D TD + PPE ++ + EE+ LP + P P+ + PAL G I
Sbjct: 498 TGMRAMDVFFTDKVIVPPEEQRFYSEEIRYLPSALGSFFIDPFPDLNEL---PALNLGSI 554
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGSFN LAKI+ + ++WA+IL VP S L++K S R R L E GL + R
Sbjct: 555 TFGSFNRLAKISGQTYRIWAQILLQVPGSCLILKTPELNERSNRERILRYFENAGLTADR 614
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ +L +HM+AY +DI+LD FP+ G T E L MGVP +T+ + + S
Sbjct: 615 IVMLGRSSW-FEHMRAYQQVDIALDPFPHGGGMTAMEGLMMGVPVITLNWPILTGRLSSS 673
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
L+T +GL+ I ++ED+Y++LA++ ++ + L+ LR +LR L S S + D + +E
Sbjct: 674 LMTTLGLQDWIVQSEDQYLELAIKKSAQLRQLSALRQTLRGLFSASIIGDQGAYTRVVEQ 733
Query: 539 TYRNMWHRYCKGDVPS 554
YR +W +C + S
Sbjct: 734 EYRALWREWCASNGES 749
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
Q A + P+ ++ NLG++ G++D AA +A+ NP YA+ YNNLGV ++ G
Sbjct: 188 QQAALLCPDDFEAHYNLGLILQALGQLDEAAASYRRALQLNPDYAQGYNNLGVTLQELGK 247
Query: 116 ISLAIDAYEQCLKIDPDSRNAGQN 139
A +Y + + I PD NA N
Sbjct: 248 FEEAEASYRRAVLIKPDYLNAYHN 271
>gi|330820193|ref|YP_004349055.1| TPR repeat-containing protein [Burkholderia gladioli BSR3]
gi|327372188|gb|AEA63543.1| TPR repeat-containing protein [Burkholderia gladioli BSR3]
Length = 786
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 187/548 (34%), Positives = 293/548 (53%), Gaps = 10/548 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNL A + + A+ Y+ A P A+A NNLGV+Y++ +L A + + A+ +
Sbjct: 245 YNLANALHALGRRREALDHYQRAIEQAPAHADAYNNLGVVYQEAGSLHDAADAFDTAIRL 304
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+ F +LNNL V + G MD A + A+A +P ++ ++NNLG + +D G + ID
Sbjct: 305 RSAFLAALNNLAVTMRMLGAMDEAEARLRDALAVDPRHSASHNNLGNVLKDQGRLDEGID 364
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTK 180
Y L DP + A N L A+++ H + + + R W R L +
Sbjct: 365 CYRHALACDPANVVAHGNLLYALSF-QATHPEAILDEARRWSARHEAPLRAHREPHARPA 423
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+P R L IGYVSPD+ H + F L +HD+ ++++V YS+V + DA T R +
Sbjct: 424 EPSRRLRIGYVSPDFRNHCQALFTIPLLSHHDHAHFEIVCYSSVTRPDALTRR----IAG 479
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+WR++ +D++++A ++RED IDILV+L+ H A+++ + A +PAPVQ+ W+ YP T
Sbjct: 480 HADLWREVRQLDDERLARLIREDGIDILVDLSMHMADSRPLLFARKPAPVQIAWLAYPGT 539
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TG+ IDYR+TD DP + E +RLPE F CY P + V PAL NG+ TF
Sbjct: 540 TGIEAIDYRLTDPWLDPAGADGWYSERSLRLPETFWCYDPLTDTPEVNALPALANGYPTF 599
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G NN K+ ++WA ++ +RL++ S R L L G++ RV
Sbjct: 600 GCLNNPCKLGDASFRLWAEVMRGFDEARLILMAPE---GSARRLLLDRLRGHGIDDERVA 656
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
++++ Y +DI LDT PY G TT+ +S +MGVP VT G+S
Sbjct: 657 FTAF-RPRAEYLRTYHEIDIGLDTLPYNGHTTSLDSYWMGVPVVTRITDTVVGRAGLSQA 715
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+GL ++A ++ +V++A LA D+ LA +R LR ++ SP+ DG FA +E+ Y
Sbjct: 716 ANLGLSEIVADSDARFVEIATGLARDLPRLAAMRAGLRARLAASPLMDGARFARHVEAAY 775
Query: 541 RNMWHRYC 548
R W +C
Sbjct: 776 RGAWQNWC 783
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG + D ++ E+A P NLGV ++ L+
Sbjct: 176 LTNLGTLALATGQLDESVALLEMARQVAPDSPVVLANLGVALHRHGEFARSAALLTRTLA 235
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P F ++ NL G+ A + ++AI P +A+AYNNLGV+Y++AGS+ A
Sbjct: 236 LDPVFPEAAYNLANALHALGRRREALDHYQRAIEQAPAHADAYNNLGVVYQEAGSLHDAA 295
Query: 121 DAYEQCLKI 129
DA++ +++
Sbjct: 296 DAFDTAIRL 304
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
AI Y +P +A NNLG ++ A Y AL ++P + +L NLG +
Sbjct: 124 AIEAYTALLERDPARVDALNNLGNCHRQLGEHQAAQAAYLRALELQPGDADALTNLGTLA 183
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G++D + ++E A P NLGV G + + + L +DP
Sbjct: 184 LATGQLDESVALLEMARQVAPDSPVVLANLGVALHRHGEFARSAALLTRTLALDP 238
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
F AI Y A + +A L + A+E Y L P +LNNLG
Sbjct: 87 FAEAIGAYRQALALDADSIDAHFALASALQSAGQAAPAIEAYTALLERDPARVDALNNLG 146
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ G+ AA +A+ P A+A NLG L G + ++ E ++ PDS
Sbjct: 147 NCHRQLGEHQAAQAAYLRALELQPGDADALTNLGTLALATGQLDESVALLEMARQVAPDS 206
>gi|430746859|ref|YP_007205988.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
gi|430018579|gb|AGA30293.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
Length = 873
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 212/601 (35%), Positives = 304/601 (50%), Gaps = 30/601 (4%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+ + D A +P A N+LG IY+++ + ++A+ C+Q + ++P
Sbjct: 55 LGLIAHQAGYHDKGAAHIHQALLLSPGNAAYLNSLGSIYQEKGDYEQAIPCFQEVIRLEP 114
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ ++LG T G+ + A +A P +N+LG +Y+ A+ AY
Sbjct: 115 THLLAHHSLGSALTHVGRHEEAIATFRLGLAQAPWQPAIHNSLGEVYQRLCRFPKAMTAY 174
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE 183
+P A N L N +F+ HR WG R Q + N+ DPE
Sbjct: 175 RLASLAEPSFGLAHHNYLHLTNLAPGWDTGTIFDEHRFWGLRAA--LRQPYRYPNSLDPE 232
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
RPL IGYVS D+ H ++ FIE L H++ + V +Y+ V D T R +
Sbjct: 233 RPLRIGYVSADFREHPLARFIEPVLRNHNHADSIVSLYAEVPVPDEVTRRLQGWSHN--- 289
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
WR G ++VA +RED IDILV+LTGH A N+L + A QPAPVQVT++G PNTTGL
Sbjct: 290 -WRITAGQTPQEVARQIREDAIDILVDLTGHHAGNRLDVFAQQPAPVQVTYLGSPNTTGL 348
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
P IDY +TD + PP+ + VE L LPE F C+ P A PV P PAL G TFGS
Sbjct: 349 PAIDYWLTDKVLHPPDEPVQAVERLFHLPEAFFCFEPPASAPPVSPLPALRRGRFTFGSN 408
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVV---KCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
++L ++ VL +WAR+L AVP SRL+ C P +R RF + L + R++
Sbjct: 409 HHLQQLNDDVLALWARVLDAVPGSRLLFVDRACFPEVVAWLRSRF----QTLDIAPERIE 464
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ L + Y +D+ LDTFP G +TCE+L+MGVP VT++G A + ++L
Sbjct: 465 ARQPLRLGEPDLDVYDEIDLILDTFPVTGHASTCEALWMGVPVVTLSGERTASRLSTAVL 524
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T +GL LIA ++YV A +LA+D+ LA LR LR M + +CDG F LE+ Y
Sbjct: 525 TPLGLTDLIAAAPEDYVAQAQRLANDLDGLAALRQGLRHRMER--LCDGSTFTRQLEAAY 582
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGSPGSVMPNGFNQASP 600
R +W +C S E S P I A+ +P P + +P
Sbjct: 583 RRIWRDWCA---------------TQSAESKAVSAPRPSIMARRENPQEAAPPRMTRLNP 627
Query: 601 S 601
S
Sbjct: 628 S 628
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 55 YQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
Y+ AL PN +++ LG++ G D A I +A+ +P A N+LG +Y++ G
Sbjct: 38 YRQALVADPNNAETWQLLGLIAHQAGYHDKGAAHIHQALLLSPGNAAYLNSLGSIYQEKG 97
Query: 115 SISLAIDAYEQCLKIDP 131
AI +++ ++++P
Sbjct: 98 DYEQAIPCFQEVIRLEP 114
>gi|430759455|ref|YP_007215312.1| TPR domain protein, putative component of TonB system
[Thioalkalivibrio nitratireducens DSM 14787]
gi|430009079|gb|AGA31831.1| TPR domain protein, putative component of TonB system
[Thioalkalivibrio nitratireducens DSM 14787]
Length = 739
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/488 (36%), Positives = 279/488 (57%), Gaps = 9/488 (1%)
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG-VLYRDAGSISLAIDAYE 124
SQ LG + QG+ A +++A+ + A L + G + A+ A++
Sbjct: 69 SQLFTELGRMLIQQGRPVTALAYLDEAVRRHRNSVAALRLRAYALIKIVGEMHKAVLAHQ 128
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPER 184
+ L I DS+ + L+AM+Y E + + + H DWG R L D R
Sbjct: 129 EALAIKRDSK-IERRMLMAMHYATEFSPEDIAQEHFDWGDRHGFLKGPAIGTRKPSDDPR 187
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
L +GYVS D+ HS + F+ L HD ++V+ Y+A K D+ T +++ +
Sbjct: 188 RLRVGYVSADFRNHSAASFLRPILENHDRTRFEVIGYAANAKQDSVT----DELKRLCDR 243
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
WR+I+G+ ++V +R+D +DILV+L GHT+ N+L + + AP+QVT++GYPN TG+
Sbjct: 244 WREIHGLATQEVVEAIRKDCVDILVDLAGHTSGNRLDVFIRRAAPLQVTYLGYPNGTGIR 303
Query: 305 TIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
++D R+TD++ DPP + + E L+R+ FLCY P A PV P PA + GF+TFG+F
Sbjct: 304 SMDCRVTDAVTDPPGASDRLYRERLLRIDPVFLCYQPPRLAIPVGPPPAASAGFVTFGTF 363
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES--LRVDL 421
NN AKI+ +V+ VWARIL AVP+SRL++K R R +S E GL + R+DL
Sbjct: 364 NNYAKISREVIAVWARILAAVPDSRLLIKSTGLDSSETRTRLMSLFEAAGLSNPGARIDL 423
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ + +H++ Y +D++LDTFPY+GTTTTC++L+MGVP +T+ G H V S+L
Sbjct: 424 MNRVRSTEEHLRIYDRVDLALDTFPYSGTTTTCQALWMGVPVLTLYGRSHVGRVSASVLR 483
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
++ L L+A +E++Y+ A QL + LA LR +R + SP+CD F LES +
Sbjct: 484 QMALDDLVAGSEEDYIARAGQLGREPARLAALRGQMRPRLLASPLCDAHGFVRKLESLFL 543
Query: 542 NMWHRYCK 549
W + +
Sbjct: 544 GAWRQVTE 551
>gi|196232461|ref|ZP_03131314.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223533|gb|EDY18050.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 760
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 308/623 (49%), Gaps = 93/623 (14%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAV---------- 52
NLG + D AI Y+ A NP+ AEA NNLG I + L +A+
Sbjct: 147 NLGDVLSAAGRKDEAIAAYQEAIRLNPNFAEAYNNLGNILRGERRLSEAITVFGEAQRLL 206
Query: 53 ------------------------ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
YQ AL IKP F Q+L LG QG+ D AA
Sbjct: 207 PDSAEIHNNLAAALADDGQFAHADAAYQRALKIKPAFPQALFGLGNNLAKQGRRDEAAAA 266
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD---------------- 132
A+ P YA+A+NNLG L R+ G + AI AY + + + PD
Sbjct: 267 FRAALETQPDYAKAWNNLGNLLREMGQMDEAIAAYRRTIALQPDYAEVYSNLANALKDTG 326
Query: 133 ----------------SRNAG--QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT 174
+NAG N + +++ L E R+W + F + ++
Sbjct: 327 DLDGAMETHRWARRLQPKNAGIQSNVIYTLHFHPRTDAAALAEEQREWQRVFGQPAQRFD 386
Query: 175 SWDNT-KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
W ++PER L +GYVS +++ H V + + D+ ++ YS VKAD+ T +
Sbjct: 387 DWSAVDRNPERRLRVGYVSAEFYYHVVGWNMLPLFKGRDHSQFETFCYSNAVKADSVTQQ 446
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
RE WR + ++A M+R D ID+LV+L+ H A N+L + A +PAPVQV+
Sbjct: 447 IREL----SDHWRVTTDKTDLEMAEMIRRDGIDVLVDLSQHMAGNRLPVFARRPAPVQVS 502
Query: 294 WIGYPNTTGLPTIDYRIT-----DSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
+ GYP +T + I +RIT D +A P + ++ V L + F CY P V
Sbjct: 503 FAGYPESTAIEAIGWRITGQYLEDDVAAPSASGERRV-----LIDSFWCYDPGKIELEVN 557
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
PA TNGF+T+GSFNN K+ P VL++W R+L A SRL++ P S R R +
Sbjct: 558 AAPAKTNGFVTYGSFNNFCKVNPDVLRLWTRVLAATEGSRLILLSHP---GSHRQRTVDI 614
Query: 409 LEQLGLESLRVDLL---PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVT 465
E+ G+ + R++ + P ++++ Y +D+ LD FPY G TT+ ++L+MGVP V+
Sbjct: 615 FEREGIAANRIEFVEPRPFA----EYLRLYQRLDLVLDPFPYNGHTTSLDALWMGVPVVS 670
Query: 466 MAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
+AG + A G+S LT +GL L+A+ EDEYV ++ +LA D+ LA LR +LR M S
Sbjct: 671 LAGQLAASRAGLSQLTNLGLTELVARTEDEYVAISTRLAGDLPRLAELRATLRSRMEASV 730
Query: 526 VCDGQNFALGLESTYRNMWHRYC 548
+ D FA +E+ YR MW +C
Sbjct: 731 LMDAPRFARQIEAAYRTMWRTWC 753
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ Y + + D A+ Y A P E +NL + + L++AV Q A+ ++
Sbjct: 79 NLGLVYRSLGRVDEAMEAYRRALQLQPALPEPYHNLANLLRQTGRLNEAVGWLQQAIRLR 138
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + NLG V + G+ D A ++AI NP +AEAYNNLG + R +S AI
Sbjct: 139 PHGVELHKNLGDVLSAAGRKDEAIAAYQEAIRLNPNFAEAYNNLGNILRGERRLSEAITV 198
Query: 123 YEQCLKIDPDS 133
+ + ++ PDS
Sbjct: 199 FGEAQRLLPDS 209
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 72/136 (52%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+ + + D+A+ + A P A +NLG++Y+ +D+A+E Y+ AL ++P
Sbjct: 46 LGLLAHQTGRSDLALEYIGRALAIEPRNGAAYSNLGLVYRSLGRVDEAMEAYRRALQLQP 105
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ +NL + G+++ A +++AI P E + NLG + AG AI AY
Sbjct: 106 ALPEPYHNLANLLRQTGRLNEAVGWLQQAIRLRPHGVELHKNLGDVLSAAGRKDEAIAAY 165
Query: 124 EQCLKIDPDSRNAGQN 139
++ ++++P+ A N
Sbjct: 166 QEAIRLNPNFAEAYNN 181
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NL + + + A+ + + A PH E NLG + D+A+ YQ A+ +
Sbjct: 112 HNLANLLRQTGRLNEAVGWLQQAIRLRPHGVELHKNLGDVLSAAGRKDEAIAAYQEAIRL 171
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PNF+++ NNLG + + ++ A + +A P AE +NNL D G + A
Sbjct: 172 NPNFAEAYNNLGNILRGERRLSEAITVFGEAQRLLPDSAEIHNNLAAALADDGQFAHADA 231
Query: 122 AYEQCLKIDP 131
AY++ LKI P
Sbjct: 232 AYQRALKIKP 241
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
Y P EA + LG++ D A+E AL+I+P + +NLG+VY
Sbjct: 28 LYRQILAVQPMWVEAWHMLGLLAHQTGRSDLALEYIGRALAIEPRNGAAYSNLGLVYRSL 87
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G++D A E +A+ P E Y+NL L R G ++ A+ +Q +++ P
Sbjct: 88 GRVDEAMEAYRRALQLQPALPEPYHNLANLLRQTGRLNEAVGWLQQAIRLRP 139
>gi|209880678|ref|XP_002141778.1| TPR repeat-containing protein [Cryptosporidium muris RN66]
gi|209557384|gb|EEA07429.1| TPR repeat-containing protein [Cryptosporidium muris RN66]
Length = 1070
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 218/658 (33%), Positives = 320/658 (48%), Gaps = 129/658 (19%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG+ Y + + D A+ +ELA F+ NLGV+ + N+ ++ CY+ L+I
Sbjct: 398 DLGIVYYRLGRTDKALWCFELAIKFDDRNVNIYYNLGVLLYNLGNIHGSILCYEKLLNIN 457
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN SLNNL ++ + G D + + I + + YNNLGVLYRD G+ +A A
Sbjct: 458 PNCVISLNNLATLHCILGNFDKSMISFNRQIKLSYQVPDLYNNLGVLYRDCGNFVMARYA 517
Query: 123 YEQCLKIDPDSRNAGQNRLLAM-------NYINE-GHD---------------------- 152
+ +CLK+D + A QN L + NY NE G D
Sbjct: 518 FLKCLKLDSKYQIAAQNALYILNYFMPNSNYENEQGSDDENNPFDLISTDDDMPLPSPWL 577
Query: 153 ---------------------------DKLFEAHRDWGKRFMRLYSQYTS---------- 175
DKL+ WG + + Y S
Sbjct: 578 VNYPYSGSLFNNMFVKLSYLERCYISPDKLYNESLKWGNKLIDEYDAIKSKLDQLIQCTN 637
Query: 176 -------WDNTK-DPERPLVIGYVSPDYFTHSVSYFIEAPLVY----------------- 210
++ T + IG+V ++ H+VS F +P+ +
Sbjct: 638 LPKVEVNYNKTDLSTSESINIGFVGAEFCHHAVSSFAFSPITHLAMLNKRTKIGRNDKFN 697
Query: 211 -----------------HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDE 253
DY+ K+ +Y D T RF + + K WR I
Sbjct: 698 VYGYKEPEDKIKSKETIADYERVKIYIYDNSPYHDYVT-RFYKNYIDKEN-WRCIRNKCL 755
Query: 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS 313
+ M+R DKI +L++L+GHT NN L + A + AP+Q+TWIGYPNTTGL IDYRI+D
Sbjct: 756 IDTSLMIRNDKIHVLIDLSGHTVNNCLNIFALRNAPIQMTWIGYPNTTGLRYIDYRISDK 815
Query: 314 LADPPETKQKHVEELIRLPECFLCYTPSPEAGP-VCPTPALTNGFITFGSFNNLAKITPK 372
+ DP ++ QK+ E++I +P+CFLCYTP P + P L NG+ITFGSFN +AK+ PK
Sbjct: 816 IVDPVDSPQKYTEKVIYMPDCFLCYTPPLTEFPSIRDLPYLKNGYITFGSFNRIAKVHPK 875
Query: 373 VLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL-GLESLRVDLLPLILLNHDH 431
+ W +IL ++P+SRL++K K F R +L+ L + S RV LLPL ++H
Sbjct: 876 TFKTWGKILNSIPDSRLILKSKAFASSQCREYYLNIFHSLYKISSERVILLPLKDSYYEH 935
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG----------------SVHAHNV 475
+ Y+ +DISLDTFPY GTTTTCE L MGVP +T+A S+HA NV
Sbjct: 936 LDGYNDIDISLDTFPYTGTTTTCECLLMGVPLITLATCHMNATENNNKESQIFSIHAWNV 995
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
G S+LT +G LIA + DEY+ +++ L+ D+ L R +LR ++ S +C+ + FA
Sbjct: 996 GKSILTNLGTLELIATSYDEYINISILLSKDINKLLYYRQNLRSILLNSKLCNAELFA 1053
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 42/173 (24%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMA------------------------- 58
A + P+ + A N+LG++Y DKA+ C+++A
Sbjct: 385 ALLYIPYSSTAYNDLGIVYYRLGRTDKALWCFELAIKFDDRNVNIYYNLGVLLYNLGNIH 444
Query: 59 ---------LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
L+I PN SLNNL ++ + G D + + I + + YNNLGVL
Sbjct: 445 GSILCYEKLLNINPNCVISLNNLATLHCILGNFDKSMISFNRQIKLSYQVPDLYNNLGVL 504
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI--------NEGHDDK 154
YRD G+ +A A+ +CLK+D + A QN L +NY +G DD+
Sbjct: 505 YRDCGNFVMARYAFLKCLKLDSKYQIAAQNALYILNYFMPNSNYENEQGSDDE 557
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A + + AL P S + N+LG+VY G+ D A E AI + Y NLGVL
Sbjct: 378 AKKILKKALLYIPYSSTAYNDLGIVYYRLGRTDKALWCFELAIKFDDRNVNIYYNLGVLL 437
Query: 111 RDAGSISLAIDAYEQCLKIDPD 132
+ G+I +I YE+ L I+P+
Sbjct: 438 YNLGNIHGSILCYEKLLNINPN 459
>gi|394988448|ref|ZP_10381283.1| hypothetical protein SCD_00848 [Sulfuricella denitrificans skB26]
gi|393791827|dbj|GAB70922.1| hypothetical protein SCD_00848 [Sulfuricella denitrificans skB26]
Length = 735
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 295/550 (53%), Gaps = 9/550 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLGV + + + + A P AEA LG+ D+ +A + AL
Sbjct: 189 LSNLGVCLQQQGRLAESEACFRRALEIKPDSAEALCGLGITLNDQGRFPEAEANLRRALE 248
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
IKP++ + +NLG++ QG++D A +A+ +P + NN G+ +D G + +I
Sbjct: 249 IKPDYVDAHSNLGMILEKQGRIDEAIASYNRALELDPDNPDILNNFGLALQDQGRLEESI 308
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNT 179
LK P A N L NY + +++F A++++ + + L S + N
Sbjct: 309 PLMRHALKSKPGHLAAQNNLLFGFNYHPDLSAEEIFRAYQEYDTQTGLPLRSTWLPHRND 368
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
K+P R L IGYVSPD+ H+V F+E L +HD + +V Y+ + + D T R+R V
Sbjct: 369 KNPARRLKIGYVSPDFRQHAVRNFLEPLLAWHDKSSVEVYAYAELTQEDDATTRYRSYVD 428
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
W G++++ +A +R+D IDILVEL GHTA+N+L + A +PAPV ++W+GY
Sbjct: 429 H----WIPTKGMNDEALAQRIRDDGIDILVELAGHTASNRLTVFARKPAPVSLSWMGYGY 484
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TTGL IDY +TD+++ P + E+ RL Y P+ + G V PA G+IT
Sbjct: 485 TTGLSAIDYYLTDAVSAPLGSDSLFAEQPWRLENPPHAYRPAVDMGEVGDLPAQQRGYIT 544
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FG+ +I + ++VW+ IL A+PNSRLV+ + F ++ R + E+ + R+
Sbjct: 545 FGTLTRSIRINHRTIRVWSEILKAMPNSRLVIDSRNFKDPLMQERMATRFEEHDIARERL 604
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+ I + + +DI LD FP+ TT ESLYMGVP +T+AG +G S+
Sbjct: 605 E----IGYHSPPWDVFRGIDIGLDCFPHNSGTTLFESLYMGVPYITLAGRPSVGRLGSSI 660
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L VG IA++E+EY+ A++LA + LA++R LR M SP+ D FA +E+
Sbjct: 661 LQAVGHPEWIAESENEYITKAVKLAGNWDHLASIRSQLRTEMDNSPIRDEAGFARKVENA 720
Query: 540 YRNMWHRYCK 549
YR MW +C+
Sbjct: 721 YRQMWQHWCE 730
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV E + A A P+ A+A NNLG+ ++ L +A C+Q AL IK
Sbjct: 89 NLGVVLVEQGRLSEAEANLRRALEIKPNHADAHNNLGIALMKQERLSEAEPCFQQALKIK 148
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ ++LNNLG + T QG + A +A+ P Y A +NLGV + G ++ +
Sbjct: 149 PDYHEALNNLGSLLTEQGLLAEAEISCVEALKIKPDYVPALSNLGVCLQQQGRLAESEAC 208
Query: 123 YEQCLKIDPDSRNA 136
+ + L+I PDS A
Sbjct: 209 FRRALEIKPDSAEA 222
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 68/130 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + +F A Y A P+ AEA NLGV+ ++ L +A + AL IK
Sbjct: 55 NLGNALKNLRRFSEAETSYRQAIKIRPNFAEAQCNLGVVLVEQGRLSEAEANLRRALEIK 114
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + + NNLG+ Q ++ A ++A+ P Y EA NNLG L + G ++ A +
Sbjct: 115 PNHADAHNNLGIALMKQERLSEAEPCFQQALKIKPDYHEALNNLGSLLTEQGLLAEAEIS 174
Query: 123 YEQCLKIDPD 132
+ LKI PD
Sbjct: 175 CVEALKIKPD 184
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG A K A+ + A + AEA +NLG K+ +A Y+ A+ I+P
Sbjct: 22 LGTALSGQGKSSEALDALQRAIALSRDDAEAHSNLGNALKNLRRFSEAETSYRQAIKIRP 81
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF+++ NLGVV QG++ A + +A+ P +A+A+NNLG+ +S A +
Sbjct: 82 NFAEAQCNLGVVLVEQGRLSEAEANLRRALEIKPNHADAHNNLGIALMKQERLSEAEPCF 141
Query: 124 EQCLKIDPDSRNAGQN 139
+Q LKI PD A N
Sbjct: 142 QQALKIKPDYHEALNN 157
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG + +A++ Q A+++ + +++ +NLG + A +AI P
Sbjct: 22 LGTALSGQGKSSEALDALQRAIALSRDDAEAHSNLGNALKNLRRFSEAETSYRQAIKIRP 81
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
+AEA NLGV+ + G +S A + L+I P+ +A N +A+
Sbjct: 82 NFAEAQCNLGVVLVEQGRLSEAEANLRRALEIKPNHADAHNNLGIAL 128
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + LG + QGK A + +++AIA + AEA++NLG ++ S A +
Sbjct: 13 PRYGIGWKALGTALSGQGKSSEALDALQRAIALSRDDAEAHSNLGNALKNLRRFSEAETS 72
Query: 123 YEQCLKIDPD 132
Y Q +KI P+
Sbjct: 73 YRQAIKIRPN 82
>gi|196232942|ref|ZP_03131791.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196222920|gb|EDY17441.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 743
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 194/591 (32%), Positives = 301/591 (50%), Gaps = 50/591 (8%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+A + + AI + A P EA NNLG + + +L +A ECY+ AL
Sbjct: 156 LSNLGIALATVGETTEAISRFREALQIRPDFPEAQNNLGNALQQQGSLAEAEECYRAALR 215
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P+F + NNLG V G+ + A +A+ P+Y A+N+LG G + ++
Sbjct: 216 LRPDFPDASNNLGNVLLEMGRPEEAVACHRRALELRPSYPGAWNSLGNACGAIGGVDESV 275
Query: 121 DAYEQCLKIDPDSRNA---------GQ-------------------------NRLLAMNY 146
AY + +++DP A GQ N + A ++
Sbjct: 276 AAYREAIRLDPRYGQAYSNLAVKLSGQGLAEESLRCLRTAVDLRPNDPSLLSNLIYAQHF 335
Query: 147 INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
+ ++ E W +RF ++S+ N +P+R L +GYV+ ++ HS+ ++
Sbjct: 336 MRGVSAGEIAEDWALWNRRFGHPEGAFSSYPNLPEPDRRLRVGYVTSEFREHSLGRYLVP 395
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
HD+ +++V +S V K D T FRE W I G+ + +A +VRE KID
Sbjct: 396 LFRSHDHGQFEIVCFSDVAKPDELTTFFREH----SDAWTSIVGMSDAALAELVREKKID 451
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD--------SLADPP 318
ILV+L H NN+L + A +PAPVQV++ GYP ++GL I YR++D +AD
Sbjct: 452 ILVDLHQHMGNNRLPLFARKPAPVQVSFAGYPASSGLEAIGYRLSDRWVEGMGEEMADGK 511
Query: 319 ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWA 378
+ E + L + F CY P PAL G+ TFGS NN K+ + L +WA
Sbjct: 512 WQNARGGAERVFLLDSFWCYQSGGVDLPCNALPALQRGYFTFGSLNNFCKVNVETLVLWA 571
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
R+L VPN+RLV+ C+ S R R + G+ + R+ D+++ Y +
Sbjct: 572 RVLNHVPNARLVLLCEE---GSQRQRTWDLFARHGISAERISFAE-PRARTDYLKLYYDV 627
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
DI LDTFPY G TT+ ++L+MGVP V++ G V G+S L +GL +A EDEYV+
Sbjct: 628 DIVLDTFPYNGHTTSLDALWMGVPVVSLVGEVAVSRAGLSQLNNLGLPEWVAHTEDEYVE 687
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
+A +LA D+T LA +R +LR M S + D +F +E YR MW ++C+
Sbjct: 688 IATRLAGDLTHLAEMRATLRARMEASVLMDATHFTRQIEEAYRAMWRQWCE 738
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 2/157 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+ + + A A N A A +NLG +Y+ +A+E ++ AL I P
Sbjct: 91 LGIIAMQTGHLEAARQLLGKAIAGNDQHALAYSNLGEVYRALGQPREAIEAFRRALQIGP 150
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++ L+NLG+ G+ A +A+ P + EA NNLG + GS++ A + Y
Sbjct: 151 VYAEVLSNLGIALATVGETTEAISRFREALQIRPDFPEAQNNLGNALQQQGSLAEAEECY 210
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L++ PD +A N L + G ++ HR
Sbjct: 211 RAALRLRPDFPDASNN--LGNVLLEMGRPEEAVACHR 245
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG L +A Y L+ +PN ++ LG++ G ++AA +++ KAIA N
Sbjct: 57 LGTQLHQSGRLVEAENLYTQVLAREPNHPEANRLLGIIAMQTGHLEAARQLLGKAIAGND 116
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+A AY+NLG +YR G AI+A+ + L+I P
Sbjct: 117 QHALAYSNLGEVYRALGQPREAIEAFRRALQIGP 150
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
Y P+ EA LG+I +L+ A + A++ + + +NLG VY
Sbjct: 73 LYTQVLAREPNHPEANRLLGIIAMQTGHLEAARQLLGKAIAGNDQHALAYSNLGEVYRAL 132
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
G+ A E +A+ P YAE +NLG+ G + AI + + L+I PD A N
Sbjct: 133 GQPREAIEAFRRALQIGPVYAEVLSNLGIALATVGETTEAISRFREALQIRPDFPEAQNN 192
>gi|398805154|ref|ZP_10564135.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
gi|398092316|gb|EJL82731.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
Length = 717
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 188/554 (33%), Positives = 284/554 (51%), Gaps = 12/554 (2%)
Query: 9 GEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQS 68
G + + + Y +P E NLG+I + + A ++ A+ ++P F +
Sbjct: 168 GRLGRSNELAAVYRRVLELDPDNVEILYNLGLILRHLGRMQDAAMNFRRAVELRPGFIDA 227
Query: 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128
L NLG V D A K + P A ++NL +D G + A+++Y + L
Sbjct: 228 LCNLGDVSIGLRLFDDAVASYRKVLELEPENAGVHHNLAAALKDIGRLDEALESYHRALA 287
Query: 129 IDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVI 188
I PD A N LL + ++ ++ E R +G RL + N DP R L I
Sbjct: 288 IKPDFPIAQSNVLLIQHLLSRLSVEQQLEEARRFGTMVARLAPAPAAPGNLADPFRCLRI 347
Query: 189 GYVSPDYFTHSVSYFIEA---PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
G+VS D +H V +FIE+ L ++ YS + AD T R + W
Sbjct: 348 GFVSGDLHSHPVGHFIESVLAALSAGAAGRLELFAYSNSLTADEVTARIKRHFQS----W 403
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ + G+ ++ +A +R+D IDIL++L+GHT N+L + A +PAPVQ++W+GY TTG+
Sbjct: 404 QSVVGLADEVMAQRIRDDGIDILIDLSGHTGKNRLPVFAWKPAPVQISWLGYFATTGVEA 463
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNN 365
IDY I D P E + EE++RLPE LC+TP + P PAL NG++TF FN
Sbjct: 464 IDYLIADPWTLPSELESHFTEEILRLPETRLCFTPPAHDVEIAPLPALRNGYVTFACFNT 523
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI 425
L+K+ V+ +WAR+L AVP SRL + P D H E+ + V+ L L+
Sbjct: 524 LSKVNDSVVALWARVLHAVPGSRLQLVAPP---DQQVHWQRVVTERFAAHGIIVEQLQLL 580
Query: 426 LLN--HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
++ Y +DI+LD FPY G TTT E+L+MGVP +T+AG GV LL
Sbjct: 581 SAGPRAAYLATYQQVDIALDPFPYTGGTTTAEALWMGVPVLTLAGKSFLARQGVGLLMNA 640
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL +A++ D+YV+ A+ A D+ LA+LR +R+ + SP+ D FA E RN+
Sbjct: 641 GLPEWVAEDADDYVRRAVSHAGDLQRLASLRAGMREQVLASPLFDAPQFARHFEEALRNV 700
Query: 544 WHRYCKGDVPSLKR 557
W ++C+ S R
Sbjct: 701 WRKWCEAQTASKAR 714
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G+A + + + A+ Y+ A P A A N G I DR + +A+E + A+ KP
Sbjct: 28 GMALEQQGQLEEALRCYDTAISLMPELARAHFNRGTILLDRGDAQQALEAFTQAVRYKPE 87
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ + NLG +T + +AA +A+A P + EA LG + G A+ +Y
Sbjct: 88 SAGAHFNLGAAHTRLEQHEAAVSAYRQALALKPDFPEAEMALGTALEELGQDQAAVASYR 147
Query: 125 QCLKIDPD 132
+ L++ D
Sbjct: 148 RALEMKHD 155
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N G + A+ + A + P A A NLG + + + AV Y+ AL++
Sbjct: 59 FNRGTILLDRGDAQQALEAFTQAVRYKPESAGAHFNLGAAHTRLEQHEAAVSAYRQALAL 118
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+F ++ LG G+ AA +A+ + E++ L L G +
Sbjct: 119 KPDFPEAEMALGTALEELGQDQAAVASYRRALEMKHDHVESHEKLVKLLGRLGRSNELAA 178
Query: 122 AYEQCLKIDPDS-----------RNAGQNRLLAMNY 146
Y + L++DPD+ R+ G+ + AMN+
Sbjct: 179 VYRRVLELDPDNVEILYNLGLILRHLGRMQDAAMNF 214
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + FD A+ Y P A +NL KD LD+A+E Y AL+IK
Sbjct: 230 NLGDVSIGLRLFDDAVASYRKVLELEPENAGVHHNLAAALKDIGRLDEALESYHRALAIK 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIE 90
P+F + +N+ ++ + ++ ++ E
Sbjct: 290 PDFPIAQSNVLLIQHLLSRLSVEQQLEE 317
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
D+A+ Q A + +Q L G+ QG+++ A + AI+ P A A+ N
Sbjct: 3 RFDQAMGAGQEAPGNGLSAAQLLEQ-GMALEQQGQLEEALRCYDTAISLMPELARAHFNR 61
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
G + D G A++A+ Q ++ P+S A N
Sbjct: 62 GTILLDRGDAQQALEAFTQAVRYKPESAGAHFN 94
>gi|381157478|ref|ZP_09866712.1| hypothetical protein Thi970DRAFT_01096 [Thiorhodovibrio sp. 970]
gi|380881341|gb|EIC23431.1| hypothetical protein Thi970DRAFT_01096 [Thiorhodovibrio sp. 970]
Length = 593
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 266/490 (54%), Gaps = 10/490 (2%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + + G+ + ++D A + +++ A + LG R G I AI
Sbjct: 106 PSAAVLWGHFGLALFDEDRLDDAIWALRQSLDCQTEDARIWRVLGNALRLRGEIDEAISV 165
Query: 123 YEQCLKIDPDSRNAGQNRLL-AMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
Y+ L PD A RLL AMN +++ E HR W + + +
Sbjct: 166 YQALLSRRPD--QATHRRLLLAMNSSASLSPEEVAEEHRRWADLYAAPAENAAANPRAAN 223
Query: 182 PER-PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
P++ PL +GYVSPD+ +H V+YF + H + +VV Y+ +D+ R ++
Sbjct: 224 PDKSPLTVGYVSPDFRSHPVAYFFLPVVEGHRRDHVRVVAYATTKASDS----VRRRIRA 279
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
WR++ G ++ +R D +DILV+L GH N+L + AC+ APVQVT++GYPNT
Sbjct: 280 AADQWREVAGWSRDRLLRQIRADGVDILVDLAGHFTGNRLDVFACRAAPVQVTYLGYPNT 339
Query: 301 TGLPTIDYRITDSLADPP-ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TGL +DYR+ D ++DPP EELIRL FL + P +A V +PA+ G+IT
Sbjct: 340 TGLRAMDYRLVDPVSDPPGRADALATEELIRLAPGFLAFEPPSDAPAVAESPAVARGYIT 399
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL-R 418
FGSFN +AK++P ++ WA +L +V N+RL++K + R R GL L R
Sbjct: 400 FGSFNRIAKLSPPTIETWAALLESVANARLLLKSNGLTTEGSRERLRMAFSNAGLHDLSR 459
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+DL + H+ Y +DI+LD FPY GTTTTC++L+MGVP V + G+ H +G+S
Sbjct: 460 LDLRNYVPSRRAHLALYGELDIALDPFPYNGTTTTCQALWMGVPVVALEGAAHVSRMGMS 519
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
LL +VGL IAK+ + YV++A LAS V L LR LR +M+ SP+ D F LE
Sbjct: 520 LLQQVGLSAHIAKDREAYVRIAANLASQVEQLNALRHCLRPMMASSPLLDHVGFVRQLEH 579
Query: 539 TYRNMWHRYC 548
YR +W R C
Sbjct: 580 AYRTLWRRAC 589
>gi|83594187|ref|YP_427939.1| hypothetical protein Rru_A2855 [Rhodospirillum rubrum ATCC 11170]
gi|386350939|ref|YP_006049187.1| hypothetical protein F11_14640 [Rhodospirillum rubrum F11]
gi|83577101|gb|ABC23652.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
gi|346719375|gb|AEO49390.1| hypothetical protein F11_14640 [Rhodospirillum rubrum F11]
Length = 937
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 280/522 (53%), Gaps = 14/522 (2%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
LG+ Y + + ++ L+ KP+ ++ +LGVV QG++ + + +
Sbjct: 395 TLGLHYFQENAYEDCATVFETVLAKKPDHVEARASLGVVRWSQGRLVESLALAQSIREDF 454
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG----QNRLLAMNYINEGHD 152
P LG ++ D + A++ ++ L ++ N + +Y+
Sbjct: 455 PEDIRTLFLLGCVHSDLMENASALEVFD--LAVEKGGERVPPFHYSNCCFSFHYVEAMEK 512
Query: 153 DKLFEAHRDWGKRFMRLYSQYT--SWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
D LF HR W + ++ + + NT+DPER L IGYVSPD+ HSV+YF +
Sbjct: 513 DDLFARHRRWDALYGAGATELSDVTHHNTRDPERRLRIGYVSPDFRRHSVAYFFLPLVGA 572
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
HD +V YS D T RE + WRDI + +K A VRED+IDILV+
Sbjct: 573 HDRAAVEVTCYSLSTLTDQMTDLIREGCDR----WRDITTLPAEKAAERVREDEIDILVD 628
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE-LI 329
L+GHTANN L + A +PAPVQVT++GYPNTTGL IDYR+TD ADP + E L
Sbjct: 629 LSGHTANNGLSIFALKPAPVQVTYLGYPNTTGLSAIDYRLTDGFADPLGVDEDPASETLW 688
Query: 330 RLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL 389
RLP FL + P P P L+ G ITFGSFNN+AK+ + VW RIL AVP SRL
Sbjct: 689 RLPRSFLLFDEVPGLPDPAPPPVLSRGTITFGSFNNMAKVNRGCVAVWKRILDAVPGSRL 748
Query: 390 VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAG 449
++K K F + + L G++ +V P +H+ Y+ +DI+LDTFPY G
Sbjct: 749 LLKAKGFRDPATAKVLIERLIDWGVDPEQVSYAPYAKNLMEHVAVYAEVDIALDTFPYNG 808
Query: 450 TTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-KHLIAKNEDEYVQLALQLASDVT 508
TTTT E+L+MGVP + + G H+ VG S+L +GL L+ ++ D+ V A+ LA D+
Sbjct: 809 TTTTFEALHMGVPVIGLRGHRHSGRVGASILGNLGLADRLLGEDVDDMVAKAVALAGDLE 868
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
L +R LR+ + SP+ DG F LE YR MW R+C G
Sbjct: 869 GLMRMRAGLRERLRASPLQDGPGFVADLEGAYRAMWRRWCAG 910
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
+ A+ Y A P EA NNL +D D+A+ + A S++P+ LN
Sbjct: 236 LERAVEAYGQAIRRAPDSFEAHNNLAQALRDLGRRDEALVHAERAASLRPHDVTVLNTQA 295
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ ++D A ++E+A+A + AE ++NLG+ A A + + + + PD
Sbjct: 296 NILRGLRRVDEAVAILERALACDGRSAETHSNLGLALLAAQDRQRAEEHFRKAAALAPDC 355
Query: 134 RNAGQNRLLAMNYINEGHD 152
+ N + +IN G +
Sbjct: 356 VDIIVNLACFLIHINAGKE 374
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A ++ + D A+V E A PH N I + +D+AV + AL+
Sbjct: 259 NLAQALRDLGRRDEALVHAERAASLRPHDVTVLNTQANILRGLRRVDEAVAILERALACD 318
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG--VLYRDAGSISLAI 120
+++ +NLG+ A E KA A P + NL +++ +AG L +
Sbjct: 319 GRSAETHSNLGLALLAAQDRQRAEEHFRKAAALAPDCVDIIVNLACFLIHINAGKEVLGV 378
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVI----YKDRDNLDKAVECYQMALS 60
GVA + + + A ++ A + A NLG + + D L++AVE Y A+
Sbjct: 189 GVALAALGEGEAAREAFKNAILRDGAAPMAWTNLGNLEIRAARSADALERAVEAYGQAIR 248
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P+ ++ NNL G+ D A E+A + P N + R + A+
Sbjct: 249 RAPDSFEAHNNLAQALRDLGRRDEALVHAERAASLRPHDVTVLNTQANILRGLRRVDEAV 308
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAM 144
E+ L D S N LA+
Sbjct: 309 AILERALACDGRSAETHSNLGLAL 332
>gi|407784334|ref|ZP_11131501.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
protein, partial [Oceanibaculum indicum P24]
gi|407197118|gb|EKE67205.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
protein, partial [Oceanibaculum indicum P24]
Length = 1043
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 298/582 (51%), Gaps = 43/582 (7%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVEC-------- 54
NLG+ ++ A+ + A P AE +NLG Y+D LD+AV+
Sbjct: 128 NLGIVLKKLGDEKAAMAGFNRALALWPRFAEPLSNLGNGYRDAGQLDRAVKACRMAIAYE 187
Query: 55 --------------------------YQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
Y+ AL+++P+ +L +LG ++ G + A +
Sbjct: 188 PGLAAAHLNLANALSDTWNYADARAAYEQALTLEPDNLLALVSLGALHADHGHLALARQR 247
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+ +A+ +P EA NNLG++ ++ + A+ YE+ ++ PD+ + N+L +NY
Sbjct: 248 LTRALELDPDSKEALNNLGIVVKEECDFAAALALYERAREVAPDNFDYASNKLYCLNYHP 307
Query: 149 EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+ + +FE++R W + + + N + P R L +GYVSPD+ H+ +FIE L
Sbjct: 308 DLSAEAIFESYRAWDRDYAAPLLPQGTHANDRTPGRRLRVGYVSPDFRRHAARHFIEPLL 367
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
HD ++ Y+ V K D + +FR V W + G+ ++ +AA +R+D IDIL
Sbjct: 368 ARHDRSKVELFAYAEVPKEDEISGQFRAYVDH----WCNSVGMSDEDLAARIRQDGIDIL 423
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V+L GHT N+L A +PAPVQV+W+GY TTG+ IDY ++D + P + E+L
Sbjct: 424 VDLAGHTRGNRLLAFARKPAPVQVSWLGYAYTTGIKVIDYFLSDPMLTPEGSDPLFAEKL 483
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
+RLP C L Y P+ PAL NG++TFGS + +I KV+ +WA IL VP+SR
Sbjct: 484 VRLPVC-LSYRPTEGLEAPAELPALANGYVTFGSLSRSVRINDKVVALWAEILSRVPDSR 542
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
LV+ + F C +R ++ LG+ + R+DL Y +DI+LD FP+
Sbjct: 543 LVLNSQTFVCPELRQHYIGKFTALGVGAERLDL----GYTSPPWPVYRQIDIALDCFPHN 598
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
TT E L+MG+P VT+ +G ++L +G IA +YV+ A+ LASD
Sbjct: 599 SGTTLFEGLHMGLPFVTLQDRPSVGRLGSAILAGLGRPEWIATTPADYVEKAVALASDFG 658
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
LA +R LR M +S + D FA +E+ Y MW R+ G
Sbjct: 659 RLAEIRRDLRQEMERSRLRDEAAFARSVEAAYDRMWQRWRDG 700
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N+G + + + D A A NP A A N G ++ D NL +A + + S
Sbjct: 793 LANMGESLRRLGRLDEARTCLAEAVALNPSHANALANFGALHADMGNLAEAESWMRKSTS 852
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + + NLG QG++ A E E A++ P Y +A + + + + G + LA+
Sbjct: 853 LNPGNAAAHYNLGNNLKAQGRLTEALESFETAVSIQPAYIDALHQVAAMQQAQGKLELAL 912
Query: 121 DAYEQCLKIDP 131
Y + L I P
Sbjct: 913 QGYRRVLDIQP 923
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGVA+ + + A + + A +P AE +NLG++ K + A+ + AL++ P
Sbjct: 95 LGVAHHQRSDHETARILIQQAIILDPSKAEFHSNLGIVLKKLGDEKAAMAGFNRALALWP 154
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
F++ L+NLG Y G++D A + AIA P A A+ NL D + + A AY
Sbjct: 155 RFAEPLSNLGNGYRDAGQLDRAVKACRMAIAYEPGLAAAHLNLANALSDTWNYADARAAY 214
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
EQ L ++PD+ LLA+ + H D
Sbjct: 215 EQALTLEPDN-------LLALVSLGALHAD 237
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 64/128 (50%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
GV ++ +FD+A+ +A P E N+G + LD+A C A+++ P
Sbjct: 762 FGVLAYQVGRFDIAVQLIGVAVKQRPQEVEFLANMGESLRRLGRLDEARTCLAEAVALNP 821
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ + +L N G ++ G + A + K+ + NP A A+ NLG + G ++ A++++
Sbjct: 822 SHANALANFGALHADMGNLAEAESWMRKSTSLNPGNAAAHYNLGNNLKAQGRLTEALESF 881
Query: 124 EQCLKIDP 131
E + I P
Sbjct: 882 ETAVSIQP 889
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG + A+ +E A P +A + + + + + L+ A++ Y+ L I
Sbjct: 862 YNLGNNLKAQGRLTEALESFETAVSIQPAYIDALHQVAAMQQAQGKLELALQGYRRVLDI 921
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P ++LNN+GVV + A + KA P AE NLGV+ +GS++ A+
Sbjct: 922 QPQHIETLNNIGVVLERLDRHPEATPFLRKAAELRPDIAEVQCNLGVVLSHSGSLTEALR 981
Query: 122 AYEQCLKIDP 131
++ +++ P
Sbjct: 982 CLQRAVELKP 991
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K ++A+ Y P E NN+GV+ + D +A + A ++P+ ++ NL
Sbjct: 907 KLELALQGYRRVLDIQPQHIETLNNIGVVLERLDRHPEATPFLRKAAELRPDIAEVQCNL 966
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
GVV + G + A +++A+ P + AY N+ + G A ++Q L PD
Sbjct: 967 GVVLSHSGSLTEALRCLQRAVELKPAFVGAYGNMAAVLDKLGQEDEAAAVFQQGLAAAPD 1026
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K A Y +P A LGV + R + + A Q A+ + P+ ++ +NL
Sbjct: 70 KLAEAENLYRQVLALDPREPRALQLLGVAHHQRSDHETARILIQQAIILDPSKAEFHSNL 129
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+V G AA +A+A P +AE +NLG YRDAG + A+ A + +P
Sbjct: 130 GIVLKKLGDEKAAMAGFNRALALWPRFAEPLSNLGNGYRDAGQLDRAVKACRMAIAYEP 188
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G + +M A + + NP A A NLG K + L +A+E ++ A+S
Sbjct: 827 LANFGALHADMGNLAEAESWMRKSTSLNPGNAAAHYNLGNNLKAQGRLTEALESFETAVS 886
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
I+P + +L+ + + QGK++ A + + + P + E NN+GV+
Sbjct: 887 IQPAYIDALHQVAAMQQAQGKLELALQGYRRVLDIQPQHIETLNNIGVV 935
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N+GV + + A F A P AE NLGV+ +L +A+ C Q A+
Sbjct: 929 LNNIGVVLERLDRHPEATPFLRKAAELRPDIAEVQCNLGVVLSHSGSLTEALRCLQRAVE 988
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
+KP F + N+ V G+ D AA + ++ +AA P A
Sbjct: 989 LKPAFVGAYGNMAAVLDKLGQEDEAAAVFQQGLAAAPDDA 1028
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y+ + A+A + GV+ D AV+ +A+ +P + L N+G G
Sbjct: 745 YKQVLSLDAQNADAHHLFGVLAYQVGRFDIAVQLIGVAVKQRPQEVEFLANMGESLRRLG 804
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
++D A + +A+A NP++A A N G L+ D G+++ A + ++P + A N
Sbjct: 805 RLDEARTCLAEAVALNPSHANALANFGALHADMGNLAEAESWMRKSTSLNPGNAAAHYN 863
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
L +A Y+ L++ P ++L LGV + + + A +I++AI +P+ AE ++NL
Sbjct: 70 KLAEAENLYRQVLALDPREPRALQLLGVAHHQRSDHETARILIQQAIILDPSKAEFHSNL 129
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
G++ + G A+ + + L + P N L Y + G D+ +A R
Sbjct: 130 GIVLKKLGDEKAAMAGFNRALALWPRFAEPLSN--LGNGYRDAGQLDRAVKACR 181
>gi|381160368|ref|ZP_09869600.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
gi|380878432|gb|EIC20524.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
Length = 717
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/550 (34%), Positives = 287/550 (52%), Gaps = 21/550 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LG + + A+ Y+ A + A N G + + L +A E Y+ AL++
Sbjct: 167 FQLGNVLRMLGRMQDALSAYDHALKLDDKDASVYANRGNVLVELGRLKEAEESYRKALAV 226
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+ +LNN + QGK A + E A+A NP E NN G RD G ++ AI
Sbjct: 227 DQDHIVTLNNWASLLLKQGKSREAICVFETALAINPKNPEVNNNYGAALRDVGELNEAIA 286
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
A++Q + +P A NR++A++Y E D ++ A R + RF + S +
Sbjct: 287 AFKQAITSEPSYYQAHSNRIMALHYREENPDQRIARAIRQFAARFEQEEICRPSM-LART 345
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
R + IGYVS D+ H V YF+E +++HD ++ YS D T R + K
Sbjct: 346 LRRKMRIGYVSGDFREHPVGYFLEGAMLHHDRAELEIYCYSNNRVRDRLTARLQACANK- 404
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
WR I + +K +R D IDILV+L+GHTANN+L + A +PAPVQVTW+GY TT
Sbjct: 405 ---WRTIENLPDKAALECIRTDGIDILVDLSGHTANNRLSLFALRPAPVQVTWLGYFGTT 461
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
GL ID+ + D ++K E + RLPE +LC+TP + A+ + +TF
Sbjct: 462 GLKAIDFILADRFVIRDGEEEKFSERVWRLPESYLCFTPPVTRSEIDSKCAMPDS-VTFA 520
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL-------EQLGL 414
SFNN+ K++ + +++W+R+L VP S L+++ K VR + L EQL +
Sbjct: 521 SFNNILKLSERTIRLWSRVLKEVPGSNLLIRDKVLADPGVRAKVLGEFVKSGTCPEQLVM 580
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
ES + ++++ Y +DISL P+ G TTT E+L+MGVP V ++G A
Sbjct: 581 ES--------SVSREEYLREYCDVDISLSPTPFGGGTTTAEALWMGVPVVFLSGGTWAGR 632
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
+G S+L VGL L+A++E+ YV +A LA DV LR LR ++ SP+CD F
Sbjct: 633 IGESILRTVGLPELVAQDEERYVGIATALAGDVKRRRELRNDLRGMVQNSPLCDFTTFTY 692
Query: 535 GLESTYRNMW 544
LE YR MW
Sbjct: 693 ELERAYREMW 702
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G+ + + + A+ ++ A NP +A NN G + L +A+ + A+ ++P
Sbjct: 68 GLVLYALSRTEEALAAFDAALKLNPGFVKAHNNRGAVLMGAGRLKEALAAFNNAVGLEPG 127
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ N V G + + E + AIA +P ++A+ LG + R G + A+ AY+
Sbjct: 128 NQEGHVNRAKVLGELGHLGESVESFQTAIAIDPCLSDAHFQLGNVLRMLGRMQDALSAYD 187
Query: 125 QCLKIDPDSRNAGQNR 140
LK+D + NR
Sbjct: 188 HALKLDDKDASVYANR 203
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 45 RDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYN 104
R +L A+ Y+ L+ PN + +L+ LG+ + QG+ + AA +I++AI ++ A YN
Sbjct: 6 RGDLAGAIAGYKELLNQAPNHADALHLLGLAFYQQGENEQAARLIDRAIQSDSQVALFYN 65
Query: 105 NLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+ G++ A+ A++ LK++P A NR
Sbjct: 66 HYGLVLYALSRTEEALAAFDAALKLNPGFVKAHNNR 101
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
AI Y+ + P+ A+A + LG+ + + ++A A+ + N+ G+V
Sbjct: 12 AIAGYKELLNQAPNHADALHLLGLAFYQQGENEQAARLIDRAIQSDSQVALFYNHYGLVL 71
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
+ + A + A+ NP + +A+NN G + AG + A+ A+ + ++P ++
Sbjct: 72 YALSRTEEALAAFDAALKLNPGFVKAHNNRGAVLMGAGRLKEALAAFNNAVGLEPGNQEG 131
Query: 137 GQNR 140
NR
Sbjct: 132 HVNR 135
>gi|381160369|ref|ZP_09869601.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
gi|380878433|gb|EIC20525.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
Length = 721
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/577 (34%), Positives = 296/577 (51%), Gaps = 41/577 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN GV E+ K + A+ +E + NP A+A NN G + + ++AV+ +++AL I
Sbjct: 146 YNRGVLLQELGKHEDALRAFEASIDINPRYAKAQNNRGNLLRVFGRNEEAVQAFRLALEI 205
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
++L N G QG + A ++ AI NP EA+ N ++ G A++
Sbjct: 206 DGKCIEALINYGNFLRSQGMLQQALGYLDSAIHLNPASTEAHLNRSATLQEMGYFHRALE 265
Query: 122 AYEQCLKIDPDSRNAG----------------------------------QNRLLAMNYI 147
A + L DPDS +A NRL +++Y
Sbjct: 266 ACDSALARDPDSISARLNRAGILKDLGLSQKAMDEYDWVIARKPDLAVGHSNRLFSLHYW 325
Query: 148 NEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAP 207
E +F A ++G+ F ++ N ++ + L +GYVS D+ HSV +F++
Sbjct: 326 EENVQRAIFPAALEYGREFGYAANEGPYTKNKRNQAK-LRVGYVSADFRCHSVGFFLQQV 384
Query: 208 LVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
+HD Q ++ VY+ D T KV W DI G+ + VA +R D IDI
Sbjct: 385 FAHHDLQQIELFVYNNGEVRDNLTEALSGKVTH----WVDILGLPDDSVADRIRADGIDI 440
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
LV+L+GH+A N+L + A +P+PVQV+W+GY TTGL +DY I D + P ++ VE
Sbjct: 441 LVDLSGHSAGNRLPVFAMRPSPVQVSWLGYFGTTGLSAMDYVIGDGVVTPAGCEKYFVER 500
Query: 328 LIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
+ RLP C+LCYTP P ITFGSFNN+AKI+ +++WAR+L +S
Sbjct: 501 IYRLPGCYLCYTP-PALDIDTSRLGGKAREITFGSFNNVAKISDSTIKLWARVLDESKDS 559
Query: 388 RLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY 447
RLV++ K F S+R R L+ GL + R+ L P L +++++Y +D++LD PY
Sbjct: 560 RLVLRDKSFTELSMRKRMLARFGSFGLAAERLSLEP-ALGRREYLESYRHIDVALDPTPY 618
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G TTT ++L+MGVP VT+ G A + S+L +G+ A++E+EYV +A LA D
Sbjct: 619 GGGTTTADALWMGVPVVTLRGKTWAGRISTSILNALGIPEFSAQDENEYVSIASSLARDR 678
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
L LR M S CDG F LE+ YR MW
Sbjct: 679 EKKEKLARELRRKMLSSGFCDGAWFTQTLEAAYRTMW 715
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 57/114 (50%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
AI Y A FN H AEA N G++ K +A+E Y A++ P+ + N GV+
Sbjct: 93 AIEAYGRAITFNSHFAEAFLNRGIVLKGMGRNQEALEAYDNAVAENPSLFLAHYNRGVLL 152
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
GK + A E +I NP YA+A NN G L R G A+ A+ L+ID
Sbjct: 153 QELGKHEDALRAFEASIDINPRYAKAQNNRGNLLRVFGRNEEAVQAFRLALEID 206
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ ++ A +P + N G + + +A+E Y A++ +F+++ N G+V
Sbjct: 59 ALEAFDWAIRVSPSDPVSHFNRGNLLRAIGRAAEAIEAYGRAITFNSHFAEAFLNRGIVL 118
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
G+ A E + A+A NP+ A+ N GVL ++ G A+ A+E + I+P A
Sbjct: 119 KGMGRNQEALEAYDNAVAENPSLFLAHYNRGVLLQELGKHEDALRAFEASIDINPRYAKA 178
Query: 137 GQNR 140
NR
Sbjct: 179 QNNR 182
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N G I + ++A+E + A+ + P+ S N G + G+ A E +AI N
Sbjct: 45 NRGNILQALGRPNEALEAFDWAIRVSPSDPVSHFNRGNLLRAIGRAAEAIEAYGRAITFN 104
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL- 155
+AEA+ N G++ + G A++AY+ + +P A NR + + + + H+D L
Sbjct: 105 SHFAEAFLNRGIVLKGMGRNQEALEAYDNAVAENPSLFLAHYNRGVLLQELGK-HEDALR 163
Query: 156 -FEAHRDWGKRFMR 168
FEA D R+ +
Sbjct: 164 AFEASIDINPRYAK 177
>gi|162455198|ref|YP_001617565.1| hypothetical protein sce6916 [Sorangium cellulosum So ce56]
gi|161165780|emb|CAN97085.1| TPR domain protein [Sorangium cellulosum So ce56]
Length = 686
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 205/619 (33%), Positives = 295/619 (47%), Gaps = 80/619 (12%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG Y + + A+ +A P AEA NL + ++++ +LD A CY+ A
Sbjct: 74 LSHLGDVYRCLGRRPQAVAVLLMAVARKPDFAEAVFNLALTFEEQGDLDAAAACYERARD 133
Query: 61 IKPNFSQS----------------------------------LNNLGVVYTVQGKMDAAA 86
++P Q+ L LG + G+ D AA
Sbjct: 134 LEPGLLQAVERLASLRGRRGAAAGVGPAATRGPESSLSAPDALAALGETLRLGGRSDDAA 193
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID---------------- 130
A+ NP A AY LG ++ DAG AID + L+ID
Sbjct: 194 VWYRVALKLNPRMANAYTALGAIHADAGRFDEAIDDLRRALEIDRNFHVARDYLAAALGE 253
Query: 131 ------------------PDSRNAGQNRLLAMNYI-NEGHDDKLFEAHRDWGKRFMR-LY 170
PD A L M + N D L EA R W R R L
Sbjct: 254 SGLLDESQAMYREAVALCPDDPAAHSALLFNMPFWPNVTESDILAEA-RAWNARHARPLA 312
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
+Q + +R L IGYVSPD+ TH S F HD++ +++ YS+ K D
Sbjct: 313 AQAAPHTTDRSSDRRLRIGYVSPDFRTHVQSLFTIPVFQNHDHRQFEIFCYSSTDKPDNL 372
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
T R R ++R++ +D+ ++ ++R D+IDILV+LT H + ++ + A +PAP+
Sbjct: 373 TDRIR----GHADVFREVAALDDAALSEVIRRDRIDILVDLTMHMTDRRVLVFARRPAPL 428
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCP 349
QV W+ YP TTGL T+DYR++D DPP + EE +RLP+ F CY P V
Sbjct: 429 QVCWLAYPGTTGLETMDYRLSDPFLDPPGANTDVYTEETLRLPDSFWCYDPLTGVPDVSA 488
Query: 350 TPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
PAL G + FG N+ K+ VL VW R+L AVP SRL + R R S
Sbjct: 489 LPALAEGRVNFGCLNHFRKVNEGVLHVWTRVLAAVPRSRLTLMAPQ---GRARDRVRSIF 545
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
E+ G++ R++ + D+++ Y +DI LDTFP G TT+ ++L+MGVP VT+AG
Sbjct: 546 EEGGVQLDRIEFVDRCG-RLDYLRRYREIDICLDTFPSNGHTTSLDALWMGVPVVTLAGE 604
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
GV +GL LIA + YV++A LA D+ L LR +LRD M +SP+ DG
Sbjct: 605 TVVGRAGVCQAMNLGLPELIATTPEHYVRVASSLAEDLEHLGELRRTLRDRMKQSPLMDG 664
Query: 530 QNFALGLESTYRNMWHRYC 548
FA LES YR++W R+C
Sbjct: 665 PRFARNLESIYRDIWRRFC 683
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+++L V + + D A + Y P +A L VI L +A + A+
Sbjct: 6 LFDLAVQFHRAGQVDRAELLYRGVLEQAPGNGDALLLLSVITVQSGRLAEAAALLERAVR 65
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ PN + L++LG VY G+ A ++ A+A P +AEA NL + + + G + A
Sbjct: 66 VAPNNALYLSHLGDVYRCLGRRPQAVAVLLMAVARKPDFAEAVFNLALTFEEQGDLDAAA 125
Query: 121 DAYEQCLKIDP 131
YE+ ++P
Sbjct: 126 ACYERARDLEP 136
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P+ A ++LG +Y+ +AV MA++ KP+F++++ NL + + QG +DAAA
Sbjct: 68 PNNALYLSHLGDVYRCLGRRPQAVAVLLMAVARKPDFAEAVFNLALTFEEQGDLDAAAAC 127
Query: 89 IEKAIAANPTYAEAYNNLGVL 109
E+A P +A L L
Sbjct: 128 YERARDLEPGLLQAVERLASL 148
>gi|358639499|dbj|BAL26796.1| hypothetical protein AZKH_4523 [Azoarcus sp. KH32C]
Length = 585
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 284/543 (52%), Gaps = 11/543 (2%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y LG E ++ A E+A P NNLG +Y A + ++ AL I
Sbjct: 43 YFLGTMLAEQARYAQAQQHLEMAARIAPDSPYIHNNLGNVYLLSGQDAAAEQAFRKALRI 102
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P S++ NLG + +G ++ A E+ +A+A P L +D G I AI
Sbjct: 103 APQMSEAQTNLGNLLVKRGALEEAIELAGRAVATRPNEVATQVMLANALKDQGRIREAIP 162
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
Y + +++ P + A N L+A+NY+ E + AH +WG RF ++ + +
Sbjct: 163 HYRRAVQLSPGNATAQSNLLMALNYLPEISTADIRRAHEEWGARFPAAGARPAVVRSGR- 221
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
L +GY+SPD H V IE L HD++ +++ VYS D+ T R R
Sbjct: 222 ----LRVGYLSPDLGRHPVGCLIEPVLAAHDHERFEIFVYSDTACPDSMTERLR----GH 273
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
WR+I G A+++ D +D+LVEL GH A N+L M+ + APVQV+++GYP TT
Sbjct: 274 ANTWREIGGFGNDHAASVIASDGLDVLVELAGHGAGNRLAMLGRRLAPVQVSYLGYPATT 333
Query: 302 GLPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
GL ++DY ITDS DP E + E+L RL + P E V PA +G +TF
Sbjct: 334 GLASMDYVITDSALDPSEADDACYTEKLWRLDRPCFGFRPDAEFPVVAALPAAESGALTF 393
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFN L K+ V+ +WA +L A+P SRL+++ + R + + G+ S RV+
Sbjct: 394 GSFNALGKVNDAVIDLWAEVLRALPASRLLMQARALSDPGSRSCVAARFGERGIASERVE 453
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ + L +H+ + D+ LDTFP+ G TT +SL+MGVP +T+ G A +G +++
Sbjct: 454 MHGFMPLA-EHLALFHRTDVCLDTFPWNGHMTTLDSLWMGVPVLTLKGDRRAARMGTAIM 512
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+ +GL+ +A++ +++V A+ LA D++ L LR SL + + +S + DG A LE +
Sbjct: 513 SAIGLEGFVAESREDFVAKAVGLAGDLSGLRELRASLHERLERSALADGAGLARALEGAF 572
Query: 541 RNM 543
R M
Sbjct: 573 RAM 575
>gi|358635829|dbj|BAL23126.1| hypothetical protein AZKH_0787 [Azoarcus sp. KH32C]
Length = 586
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 188/537 (35%), Positives = 282/537 (52%), Gaps = 11/537 (2%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y LG E + A E A P+ NNLG +Y + A Y AL +
Sbjct: 43 YLLGSMLAEQRRLAEARPHIEEAARLAPNSPYVHNNLGNLYTLSGQNELAERAYARALQL 102
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P ++L NL + +G + + ++A+ A+P EA+ LG RD+G I A++
Sbjct: 103 QPQMVEALTNLHKLLDTRGALAESIAAAQRALVADPGMLEAHVMLGNACRDSGHIEQAVE 162
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
Y + L+I P + + N L+ MNY +++ HR WG + +D
Sbjct: 163 HYSRVLEIQPGNGPSATNLLMCMNYHPAATVNEIHAKHRAWGAGLPAAVPRMA-----RD 217
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
+ L IGYVSPD H V Y +EA L HD +++ V VYS D T R R
Sbjct: 218 HGKRLRIGYVSPDLVRHPVGYLMEALLASHDDEHFDVRVYSDAKAEDDVTARLRGHC--- 274
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
G WR+I GID+ + A++R D +DI V+L GHTA N+L + A + APVQV+++GY TT
Sbjct: 275 -GHWRNIAGIDDDTLTAVLRSDALDIAVDLAGHTAQNRLAVFARRVAPVQVSYLGYCTTT 333
Query: 302 GLPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
G+P +DY ITD+ DP E + E+L RLP +TP + V P PA G + F
Sbjct: 334 GVPAMDYVITDAGLDPTEADAACYTEQLWRLPRPSFAFTPDADFPEVGPLPAQDAGHLIF 393
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNL+K++ VL +WA +L A+P++ L ++ + R R LE G+ RV
Sbjct: 394 GSFNNLSKVSGPVLDLWAEVLRAIPDAGLFMQARALGDTGTRERVQGQLEDRGVAPERVV 453
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L L H+ ++ +D+ LDTFP+ G TT +SL+MGVP +T+ G A +G ++
Sbjct: 454 LAGFSSLAA-HLNLFNHIDVCLDTFPWNGHMTTLDSLWMGVPVLTLEGDRRAGRMGATIQ 512
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+GL +A+ ++V+ A+ L D LAN+R SLR +++S + DG A +E
Sbjct: 513 RAIGLDDFVARTSQDFVERAIALDKDRAYLANIRASLRARLAESVLADGAGLAREME 569
>gi|253996282|ref|YP_003048346.1| hypothetical protein Mmol_0910 [Methylotenera mobilis JLW8]
gi|253982961|gb|ACT47819.1| TPR repeat-containing protein [Methylotenera mobilis JLW8]
Length = 1673
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 302/570 (52%), Gaps = 8/570 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG+A E F A V Y A P A NNLG+ + +A + + A+ +
Sbjct: 287 DLGLAKAEQGFFSEAEVCYRRALELAPDYWLAYNNLGLALHRMERYQEAEQAFDQAIKLH 346
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG+ G++ A M+ KAI P Y A+ NL Y G + A
Sbjct: 347 PEEALLYSNLGLTLAALGQIKRAEAMLLKAIEIMPEYVNAHINLCTNYIAQGRLDEAEQE 406
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ-YTSWDNTKD 181
+ LK DP S A N L AMNY + + ++ K +Q YTSW + ++
Sbjct: 407 CFEALKYDPASNKARSNLLFAMNYSGHHSAEYRLQQAIEFDKVVTDKVAQPYTSWQSWQN 466
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
R L IG +S D H V+YF+E + D+ +++ Y ++ DA T R +
Sbjct: 467 GRR-LRIGLMSGDLRQHPVAYFLEHWVRNIDFSKFELTAYLTDIREDAFTGRLKPNFAH- 524
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
W+ + G+ + A ++ D +DIL +L+GHT+ N+L ++A +PAP+QV+W+GY TT
Sbjct: 525 ---WKSLVGMSDHAAAELIHADGVDILFDLSGHTSGNRLQILAWKPAPIQVSWLGYFATT 581
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
G+ +DY I D + PPE +Q VE++ +P+ LC+T A V PA+ G ITF
Sbjct: 582 GMRALDYFIADEVGVPPEHQQHFVEKIKYVPDTRLCFTAPHVAIDVSALPAIARGHITFA 641
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
SF LAK VL +WA ++ A+P+SRL +CK F +V + +LG++ R+ L
Sbjct: 642 SFQTLAKAGDDVLALWAEVMRALPDSRLRWQCKSFGDANVVANMAAKFAKLGIDVARLSL 701
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
L + ++ ++ +D+ LDTFPY G TTTCE+L+MGVP +T+AG G S+LT
Sbjct: 702 LGAV-SRENYFASHHDVDMILDTFPYPGGTTTCEALWMGVPTLTLAGDSLIARQGASMLT 760
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
GL +A+ + EY+ AL+ SD+ L++LR LR + SP+ D + FA+ +E+
Sbjct: 761 AAGLADWVAETKAEYLDKALKHCSDLGRLSDLRAGLRAQVLASPLFDAERFAMNMETAML 820
Query: 542 NMWHRYC-KGDVPSLKRMEMLQQQVVSEEP 570
MW Y K + S + + + Q+ +++P
Sbjct: 821 EMWRAYTDKLEGDSSVQPKSVSNQLATDQP 850
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y D+A+ + A F E NLG + D+ L+ AV CYQ A+ + P
Sbjct: 51 LGAIYQNQGAVDLALQALKNAAQFLADDYEVQYNLGNCFYDQQQLEAAVSCYQKAIQLNP 110
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
F+Q+ NLG + Q ++ A + A+ + ++NL + + G + A Y
Sbjct: 111 GFAQAHYNLGNAFKNQELLEQAELSYKNALRFDANNIWIFDNLAHVLYELGRFAEAKVYY 170
Query: 124 EQCLKIDPD 132
EQ L I PD
Sbjct: 171 EQALAIQPD 179
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG + + + + A+ Y+ A NP A+A NLG +K+++ L++A Y+ AL
Sbjct: 83 YNLGNCFYDQQQLEAAVSCYQKAIQLNPGFAQAHYNLGNAFKNQELLEQAELSYKNALRF 142
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
N +NL V G+ A E+A+A P + A+ L + + G + A D
Sbjct: 143 DANNIWIFDNLAHVLYELGRFAEAKVYYEQALAIQPDFVAAHIGLAAVAKALGRLQEAED 202
Query: 122 AYEQCLKI 129
+++ ++I
Sbjct: 203 GFKKAIEI 210
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 53/96 (55%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG IY+++ +D A++ + A + + NLG + Q +++AA +KAI NP
Sbjct: 51 LGAIYQNQGAVDLALQALKNAAQFLADDYEVQYNLGNCFYDQQQLEAAVSCYQKAIQLNP 110
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+A+A+ NLG +++ + A +Y+ L+ D ++
Sbjct: 111 GFAQAHYNLGNAFKNQELLEQAELSYKNALRFDANN 146
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + V + + +++ + ALSI +LG+ QG A
Sbjct: 245 PQSVDAQVKMAVFLRTLGRVPESIPYFTQALSIDQTRKDVYVDLGLAKAEQGFFSEAEVC 304
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+A+ P Y AYNNLG+ A A++Q +K+ P+
Sbjct: 305 YRRALELAPDYWLAYNNLGLALHRMERYQEAEQAFDQAIKLHPE 348
>gi|390569448|ref|ZP_10249733.1| TPR repeat-containing protein [Burkholderia terrae BS001]
gi|389938308|gb|EIN00152.1| TPR repeat-containing protein [Burkholderia terrae BS001]
Length = 709
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 191/546 (34%), Positives = 293/546 (53%), Gaps = 5/546 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E A+ A P A+A NLG D + + A++ Y AL++
Sbjct: 139 NLGHALREAGDSPAAVDSCTHAVRLKPEFAQAWINLGNALLDLGSDEGALDSYIKALALN 198
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + + NN+G + G+ +AAE ++A+A P A +NNLG + RD G + A +
Sbjct: 199 PNDANAHNNVGNILEKYGRAASAAEAYQRALALEPGRASLHNNLGNVLRDQGLLDQATAS 258
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
Y Q L +DP A N LL +N + + F R +G+ +
Sbjct: 259 YRQALALDPGFAQAHSNLLLLLNTRPDVSLREQFNEARTFGEHQSAKVPRVGHTARASQA 318
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
E+ L +G+VS D +H V +F+E+ L + D ++V Y+ + DA + +++M
Sbjct: 319 EKRLRVGFVSGDLNSHPVGFFLESVLGHLDRARIELVAYATRQRDDAVS----QRLMPHF 374
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
W DI +D++ A +R+D +DILV+L+GHT +N+L + A +PAPVQ TW+GY TTG
Sbjct: 375 SAWHDISRLDDETCARRIRDDAVDILVDLSGHTNHNRLPVFAWKPAPVQATWLGYFATTG 434
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
L +IDY I D P + + VE LP+ ++C+TP P V PA NG ITFG
Sbjct: 435 LESIDYVIADRHVLPFDESSQFVEAPWHLPDSYVCFTPPPFDIEVGALPAGDNGAITFGC 494
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN+L K+ V+ +W+R+L AVP S L++K + +V+ L G++ R+ LL
Sbjct: 495 FNHLVKLNDAVIALWSRVLDAVPGSCLLLKTRQLDDPAVQRATLERFAAHGIDGARL-LL 553
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ + AY +DI+LD FPYAG TT+ E+L+MGVP +T G +VG S++
Sbjct: 554 EGQSPRAELLAAYQRVDIALDPFPYAGGTTSVEALWMGVPVLTRRGERFLSHVGESIVNT 613
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
GL IA ++ +Y+ AL+ ++ LA LR +LR+ + SP+CD FA LE +
Sbjct: 614 TGLPEWIAADDADYLSKALRFSTQRDELAALRSTLRECLLASPLCDAPRFARHLEDAFHG 673
Query: 543 MWHRYC 548
MW R+
Sbjct: 674 MWARHA 679
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ +GV ++ I E + NP+ A NNLG + N A+ Y+ ALS
Sbjct: 70 LHFVGVLACDVGNLPAGIDLIEKSIQLNPN-AIYLNNLGNMRGRARNHQGAIAAYRAALS 128
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P+++++ +NLG G AA + A+ P +A+A+ NLG D GS A+
Sbjct: 129 LAPDYAEAHSNLGHALREAGDSPAAVDSCTHAVRLKPEFAQAWINLGNALLDLGSDEGAL 188
Query: 121 DAYEQCLKIDPDSRNAGQN 139
D+Y + L ++P+ NA N
Sbjct: 189 DSYIKALALNPNDANAHNN 207
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ A Y+L + A+A + +GV+ D NL ++ + ++ + PN + LNNL
Sbjct: 48 RMSEAAALYKLILQHDAAHADALHFVGVLACDVGNLPAGIDLIEKSIQLNPN-AIYLNNL 106
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + A A++ P YAEA++NLG R+AG A+D+ +++ P+
Sbjct: 107 GNMRGRARNHQGAIAAYRAALSLAPDYAEAHSNLGHALREAGDSPAAVDSCTHAVRLKPE 166
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 48 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
+ +A Y++ L + +L+ +GV+ G + A ++IEK+I NP A NNLG
Sbjct: 49 MSEAAALYKLILQHDAAHADALHFVGVLACDVGNLPAGIDLIEKSIQLNPN-AIYLNNLG 107
Query: 108 VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ A + AI AY L + PD A N
Sbjct: 108 NMRGRARNHQGAIAAYRAALSLAPDYAEAHSN 139
>gi|297538184|ref|YP_003673953.1| hypothetical protein M301_0992 [Methylotenera versatilis 301]
gi|297257531|gb|ADI29376.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera versatilis
301]
Length = 1193
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 295/545 (54%), Gaps = 7/545 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG+A E ++ A Y+ A P+ +A NNLG+ + ++A + A+++
Sbjct: 315 DLGLALAEQGRYSEAEACYQNAIKIEPNFWKAYNNLGLTLYNMGRFNEAEAAFDKAITLD 374
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N + +NL + QG++ A + +AI NP Y AY NLG Y G A
Sbjct: 375 ANEALIYSNLSLPLVAQGQIKRAEACLRRAIEVNPEYVNAYINLGTNYLAQGLAKEAESV 434
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ-YTSWDNTKD 181
+ Q LK D S + N L +NY + E +G+ S +TSW +
Sbjct: 435 FLQALKFDQKSTKSKSNLLFTLNYSGGHSAEYRLEQACQYGQIVDEKVSYVFTSWQQVLN 494
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
+R L +G VS D H V+YF+E + D ++++ Y+ ++ D T R +
Sbjct: 495 VKR-LKVGLVSGDLRQHPVAYFLENLAKHIDSSRFELIAYTTDIREDELTARLKPHFSG- 552
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
W+ + G+ ++ A ++ I IL++L+GHTA N+L + A +PAP+QV+W+GY TT
Sbjct: 553 ---WKSLVGLSDQAAAELIHNQGIHILMDLSGHTAENRLPIFAYRPAPIQVSWLGYFATT 609
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
G+ ++D+ I D + P + K + +E++ +P+ LC+T + P PAL NG+ITF
Sbjct: 610 GMASMDFFIADKIGVPEQNKTQFIEKVKYVPDTRLCFTAPSSLIDISPLPALANGYITFA 669
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
SF + K +VL +WA +L A+P SRL +CK F +V + L + G+E R+ L
Sbjct: 670 SFQTMVKAGDEVLALWAEVLKALPTSRLRWQCKSFADATVADDLRNRLAKHGIEPDRLIL 729
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
L + + +++A++ +D+ LDTFPY G TTTCE+L+MGVP +T+AG G SL+T
Sbjct: 730 LGSVSRDA-YLEAHAEVDMILDTFPYPGGTTTCEALWMGVPTLTLAGDTLIAGQGASLMT 788
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
GL +A+++ +YV AL +A+DV L+ +RM LR+ + SP+ + FA +E+
Sbjct: 789 AAGLGEWVAESKKDYVSKALSIATDVHRLSQMRMELREKVLVSPLFNAPQFAKNMENALW 848
Query: 542 NMWHR 546
MW+
Sbjct: 849 EMWNE 853
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG + + A Y+ A +A NL + ++D +A+ +Q ALSI
Sbjct: 144 YNLGNVLKSLNSLEQAKASYKCALRIEVDNVQAMCNLAQVLYEQDFFSEAIIYFQQALSI 203
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+ NFS + LG + G++ A KAIA NP AEA +NLG + + G +S A
Sbjct: 204 QDNFSIAYVGLGAAFQATGQLPGAEANFRKAIAINPNDAEALSNLGGVLKTLGRLSEAEI 263
Query: 122 AYEQCLKIDPDS 133
Y L I P++
Sbjct: 264 CYRTLLTITPEN 275
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG + + A + Y P + LG + K N+ ++ C++ ALS
Sbjct: 245 LSNLGGVLKTLGRLSEAEICYRTLLTITPENFDTYIKLGSLLKSMGNIAESTACFKKALS 304
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I ++ N+LG+ QG+ A + AI P + +AYNNLG+ + G + A
Sbjct: 305 INSQLEEAQNDLGLALAEQGRYSEAEACYQNAIKIEPNFWKAYNNLGLTLYNMGRFNEAE 364
Query: 121 DAYEQCLKIDPD 132
A+++ + +D +
Sbjct: 365 AAFDKAITLDAN 376
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG A+ + A + A NP+ AEA +NLG + K L +A CY+ L+I P
Sbjct: 214 LGAAFQATGQLPGAEANFRKAIAINPNDAEALSNLGGVLKTLGRLSEAEICYRTLLTITP 273
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ LG + G + + +KA++ N EA N+LG+ + G S A Y
Sbjct: 274 ENFDTYIKLGSLLKSMGNIAESTACFKKALSINSQLEEAQNDLGLALAEQGRYSEAEACY 333
Query: 124 EQCLKIDPDSRNAGQN---RLLAMNYINEGH 151
+ +KI+P+ A N L M NE
Sbjct: 334 QNAIKIEPNFWKAYNNLGLTLYNMGRFNEAE 364
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M NL E F AI++++ A + + A LG ++ L A ++ A++
Sbjct: 177 MCNLAQVLYEQDFFSEAIIYFQQALSIQDNFSIAYVGLGAAFQATGQLPGAEANFRKAIA 236
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I PN +++L+NLG V G++ A + P + Y LG L + G+I+ +
Sbjct: 237 INPNDAEALSNLGGVLKTLGRLSEAEICYRTLLTITPENFDTYIKLGSLLKSMGNIAEST 296
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAM 144
+++ L I+ A + LA+
Sbjct: 297 ACFKKALSINSQLEEAQNDLGLAL 320
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG +++ ++A + Q A P S++ NLG + Q ++D AA+ +KAI P
Sbjct: 78 LGAVFQQLGLFEQAHDALQKAADFLPKDSEAQYNLGNFFYDQQQLDDAAKYYKKAIKLTP 137
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
+A+A+ NLG + + S+ A +Y+ L+I+ D+ A
Sbjct: 138 NFAKAHYNLGNVLKSLNSLEQAKASYKCALRIEVDNVQA 176
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + ++ F+ A + A F P +EA NLG + D+ LD A + Y+ A+ + P
Sbjct: 78 LGAVFQQLGLFEQAHDALQKAADFLPKDSEAQYNLGNFFYDQQQLDDAAKYYKKAIKLTP 137
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF+++ NLG V ++ A + A+ +A NL + + S AI +
Sbjct: 138 NFAKAHYNLGNVLKSLNSLEQAKASYKCALRIEVDNVQAMCNLAQVLYEQDFFSEAIIYF 197
Query: 124 EQCLKI 129
+Q L I
Sbjct: 198 QQALSI 203
>gi|196232228|ref|ZP_03131082.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223596|gb|EDY18112.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 660
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/558 (35%), Positives = 304/558 (54%), Gaps = 20/558 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG +++ A+ Y A NP +A NLG+ + ++A+ YQ A +
Sbjct: 112 FNLGNTRSRQKEWEPAMDAYRQALQLNPRYLKAWLNLGMALHSANRPEEAIAMYQEARRV 171
Query: 62 KPNFSQSLN-NLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P F SL NLG + Q ++D A E + A+ P NNL +L +D G I+ ++
Sbjct: 172 LP-FEYSLAANLGNLLGAQCRLDEAIEAYQAAVELAPQSFVTLNNLAILLKDRGEIAESL 230
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNT 179
+ Q L ++ ++ + N + +++ + + E R W F + L S
Sbjct: 231 NVLRQSLAVEANA-DVHSNLIFNLHFDPDAAPSAIEEEKRLWNAHFAVPLRSARLPHVRD 289
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
+ PER L +GYVS D H V + HD + V Y A + DA + RF+
Sbjct: 290 RSPERRLRVGYVSADLRNHVVGRTLLPIFEAHDPTQVECVCY-ASGQTDAVSQRFQ---- 344
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
K +WRD+ + ++ +R D IDILV+L+ HTA ++L + A +PAPVQV+W+GYP
Sbjct: 345 AKAHLWRDMEHWSDDQLTEQIRTDGIDILVDLSLHTAYHRLTVFARRPAPVQVSWLGYPG 404
Query: 300 TTGLPTIDYRITDSLADPPETK-QKHVEELIRLPECFLCYTPSPEAGP-VCPTPALTNGF 357
+TG+ TID+ +TD PP+ ++ + IRLP+ + CY P+PE+ P V P+ G
Sbjct: 405 STGVETIDHWLTDRFLSPPDLDLPENADGPIRLPDAWCCY-PAPESSPEVTDLPSARTGQ 463
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
ITFG FNN +KI +VLQ+WARIL VP+SRL++ K + R + L +++ G+ +
Sbjct: 464 ITFGCFNNFSKINERVLQLWARILQGVPDSRLILLLK---TGAHREKTLEAIQRHGIAAE 520
Query: 418 RV---DLLPLIL-LNHDH-MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
R+ D P L + H +Q Y+ +DI+LD FPY G TTTC++L+MGVP + + G++
Sbjct: 521 RLVFHDYEPASLERSASHFLQRYAQVDIALDPFPYNGMTTTCDALWMGVPVIALRGTLGI 580
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
SLL +GL +EDEY + A+ LA D LA+LR +LRD + +SP+ D F
Sbjct: 581 SRASFSLLANLGLPEYAVASEDEYCETAVALAGDRDRLAHLRGTLRDRVMRSPLLDPARF 640
Query: 533 ALGLESTYRNMWHRYCKG 550
A LE+ YR MW +C+
Sbjct: 641 ARHLEAAYREMWGDWCRS 658
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + +F A Y +P + + LG++ D +++E + +++ +
Sbjct: 11 NLAMDRHRAGQFAEAETIYRQLHALHPDNVDIIHLLGIVAGDTRRYPESIEWMKRSIAAQ 70
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++ +N GV+ G+++ +A +E A P A+ + NLG A+DA
Sbjct: 71 PQVARYRSNYGVILLDCGELEESASQLETARQLQPGNADIHFNLGNTRSRQKEWEPAMDA 130
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYIN 148
Y Q L+++P A N +A++ N
Sbjct: 131 YRQALQLNPRYLKAWLNLGMALHSAN 156
>gi|386390730|ref|ZP_10075512.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfovibrio sp. U5L]
gi|385735611|gb|EIG55808.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfovibrio sp. U5L]
Length = 609
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 178/480 (37%), Positives = 256/480 (53%), Gaps = 10/480 (2%)
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G V QG+++ + + A+ NP N+ G A Y + L+ +
Sbjct: 62 GSVLLAQGRIEESLQTYHAALEENPDDWRLLTNIAGALVAQGRAREAEPYYRKALETTVE 121
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVS 192
N LL++ Y ++ D + EAH+ F ++T+ R L IG+VS
Sbjct: 122 PCRVVSNYLLSLQYRSDISDMSVIEAHKRHAAVFPYPSGSARGAEHTES-GRQLRIGFVS 180
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
PD+ H V +F L + D + V Y+ DA T R+ WR I G+D
Sbjct: 181 PDFCGHPVGHFFLQLLRHMDQTRFPVFCYANNPGEDALTDTIRQHCHA----WRSIRGVD 236
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD 312
+ + A++RED IDIL++L GHTA N+L + A +PAPVQ W+GYP TTGL +DYR+ D
Sbjct: 237 DARAGALIREDGIDILIDLAGHTAGNRLPLFARRPAPVQAAWLGYPGTTGLSCLDYRLAD 296
Query: 313 SLADPPETKQKHVEELIRLPECFLCYTPSPEAGP-VCPTPALTNGFITFGSFNNLAKITP 371
++ +PP K E +IRLP + C+ P+PE P + P P NG ITFGSFNN+AKI+P
Sbjct: 297 AVTEPPAEAGKSSETVIRLPHGYHCF-PAPENAPDLSPPPCAGNGRITFGSFNNVAKISP 355
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
+ +W +L +VP SRL++K K F RF + G ++ V+ LP H
Sbjct: 356 ASIALWREVLASVPGSRLLLKGKAFADAPTVDRF---RDAFGPQAPSVEFLPWSSDAVSH 412
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
+ Y +DI+LDT PY GT TTCE+L+MGVP +T+ G VG SLLT+ GL IA
Sbjct: 413 LDVYRRIDIALDTIPYNGTMTTCEALWMGVPVITLLGDRFTSRVGASLLTQAGLSEWIAD 472
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
++ Y++LA +LA+D LR SLR + SP+ DG+ FA +S MWH+ D
Sbjct: 473 DQAAYIRLAQRLAADSRKRDRLRQSLRTRLRASPLMDGKRFAAVFQSVLDGMWHKATAAD 532
>gi|291613071|ref|YP_003523228.1| hypothetical protein Slit_0601 [Sideroxydans lithotrophicus ES-1]
gi|291583183|gb|ADE10841.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
Length = 698
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 186/549 (33%), Positives = 289/549 (52%), Gaps = 7/549 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + A V Y+ A P AE+ +NLG ++ +A + AL ++
Sbjct: 154 NLGSVLQYLGRPVEAEVSYKHAIQLEPARAESYSNLGNTLQELGRYHEAEASLRRALQLQ 213
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ +Q+ NNLG G++ A +A+ +P AE ++NLG D G + A
Sbjct: 214 PDHAQAYNNLGGTLKHMGRLQEAESCYRRALHISPEKAEVHSNLGATLMDMGRLHEAEQC 273
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYI-NEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
Y + L+I+P+ A N L MNY N + L EA K + +++ W +
Sbjct: 274 YREALRINPEYFPAHSNLLFMMNYASNSNPEIGLAEAKFYGMKVSSKASAKFRDWSCNRQ 333
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
+R L IG+VS D+ H + YF+E+ L D + ++ Y AD T R + +
Sbjct: 334 AKR-LRIGFVSGDFRQHPIGYFLESVLKQIDPVSLELFAYPTYHAADEITARLQPRF--- 389
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
WR + G+ ++ A ++ D + +L++L+GHT +N+L + A +PAP+QV+W GY TT
Sbjct: 390 -AAWRPLCGMSDEDSARLIHGDGLHVLIDLSGHTQHNRLPVFAWKPAPIQVSWQGYLATT 448
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
G+ IDY + D P EE+ RLPEC++C+T A V P P+L+ G ITFG
Sbjct: 449 GVAEIDYFLADPYVAPIREAGHFTEEIWRLPECYMCFTEPAVALDVAPLPSLSTGCITFG 508
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
S NNL K++ + +WA+IL AVP S+L +K + +R + Q G+ R+ L
Sbjct: 509 SLNNLTKMSDATVALWAQILTAVPGSQLFLKTRLLSASEMRESVIRRYAQYGIPERRLIL 568
Query: 422 LPL-ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L +++++Y +DI+LD FPYAG TT+ E L+MGVP +T G ++G ++
Sbjct: 569 EGAGTLTRSEYLESYRHIDIALDPFPYAGCTTSIEGLWMGVPLLTKRGDRFESHLGETIN 628
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
GL IA +ED+YV A+ L+SD LA+LR LR + SP+ D FA E
Sbjct: 629 CNAGLADWIAIDEDDYVAKAVNLSSDPERLASLRAGLRHQVLSSPLFDAPRFARNFEQAL 688
Query: 541 RNMWHRYCK 549
R MW R+ +
Sbjct: 689 RGMWGRWLE 697
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ + D A Y A NP+ A NLG I+ + K+ +CYQ L +K
Sbjct: 52 NLGIILNGLGMLDEAAASYRRAIQLNPNVAGWYFNLGNIFMAQGKWQKSEDCYQCVLMLK 111
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+F + NNLG++ G+ A +AI P YA+AYNNLG + + G A +
Sbjct: 112 ADFPEVYNNLGIIRKAMGQPVEAEACYRRAIEIRPNYADAYNNLGSVLQYLGRPVEAEVS 171
Query: 123 YEQCLKIDP 131
Y+ ++++P
Sbjct: 172 YKHAIQLEP 180
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGV + +M + A+ A P+ AEA NLG+I LD+A Y+ A+ + P
Sbjct: 19 LGVLFNQMGRNAEALGPMRNAITLLPNDAEAHGNLGIILNGLGMLDEAAASYRRAIQLNP 78
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N + NLG ++ QGK + + + + + E YNNLG++ + G A Y
Sbjct: 79 NVAGWYFNLGNIFMAQGKWQKSEDCYQCVLMLKADFPEVYNNLGIIRKAMGQPVEAEACY 138
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYIN 148
+ ++I P+ +A N + Y+
Sbjct: 139 RRAIEIRPNYADAYNNLGSVLQYLG 163
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + LGV++ G+ A + AI P AEA+ NLG++ G + A +
Sbjct: 10 PQYGIGWKMLGVLFNQMGRNAEALGPMRNAITLLPNDAEAHGNLGIILNGLGMLDEAAAS 69
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164
Y + ++++P+ +A Y N G+ +F A W K
Sbjct: 70 YRRAIQLNPN---------VAGWYFNLGN---IFMAQGKWQK 99
>gi|209515740|ref|ZP_03264603.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
gi|209503767|gb|EEA03760.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
Length = 1004
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/551 (33%), Positives = 296/551 (53%), Gaps = 13/551 (2%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRD-NLDKAVECYQMALSIK 62
L VA + ++D A+ + +A P+ + L + + + + +C ++ + +
Sbjct: 427 LAVALHRLTQYDEALKYARIAHDLWPNDEDTLQVLASVLASKGLHAEAEAKCRRL-IELS 485
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++ L ++ G++D A + ++ +PT + N+LGV G ++ AID
Sbjct: 486 PKRAEGHRVLSIILQETGRLDEAEQFARSSMELDPTSSFTPNSLGVTLMQQGRLADAIDE 545
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKD 181
+ + L IDP+ A N L M + D+LF HR + + F L + +N +D
Sbjct: 546 FRRALAIDPNFELAYNNLLFCMTHNEAIAPDELFAEHRRFAEHFEAPLKPNWPRHENARD 605
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIRFREKVM 239
PER L +G++S D+ H+V+ F+E P+ H ++ K+ +Y S D+ T R
Sbjct: 606 PERALRVGFISGDFCRHAVASFLE-PVAAHLSRDPKLSLYAYSNTYLDDSTTASLR---- 660
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
K G WR + G+ ++ VA MVR D IDIL++L GHTA+N+LG +A +PAP+Q WIGYP
Sbjct: 661 KIFGHWRHVVGMSDETVAGMVRADGIDILIDLAGHTAHNRLGTLARKPAPIQACWIGYPG 720
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TTGL +DY I D L P + + E I + P PV PAL G++T
Sbjct: 721 TTGLDAVDYFIADRLWVPSDRFRNQFSEKIAYLPAVAPFVADPICPPVNALPALHKGYVT 780
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FGSFN + K+ V+ +W+R++ AVPNSR+V+ P D + E+ G+ R+
Sbjct: 781 FGSFNRMDKLRRDVVALWSRLMHAVPNSRMVIGAMP--RDGSLGKLPDWFEEEGIARDRL 838
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
D +P + ++Q + +D LD+FP++G TT SL+MGVP +T+ G G++
Sbjct: 839 DFMPRASVP-VYLQQHHRVDFCLDSFPFSGLTTALHSLWMGVPTLTLPGETVPGRSGLTA 897
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+T VGL + +A+++D++V+ + LASD+ ALA LR LR+ +SPV + A +
Sbjct: 898 MTHVGLANFVARDKDDFVRKGVALASDLPALAALRAGLRERCGQSPVFRPELVAETVAQA 957
Query: 540 YRNMWHRYCKG 550
R MW R+C G
Sbjct: 958 LRIMWRRWCDG 968
>gi|443325693|ref|ZP_21054376.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Xenococcus sp. PCC 7305]
gi|442794696|gb|ELS04100.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Xenococcus sp. PCC 7305]
Length = 1020
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 286/555 (51%), Gaps = 46/555 (8%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
PH A N LG+ ++ + A+ C+Q A+ PN + SLNNLG + + + A
Sbjct: 465 PHNLFALNALGISWQSQGKYQPALSCFQQAVKNAPNSADSLNNLGTLLRMLKRPQEALPY 524
Query: 89 IEKAIAANP-------TYAEAYNNLG-----------VLYRDA----------------G 114
+ ++I NP + A NLG +L R+A
Sbjct: 525 LRRSIELNPDNDITQSNFLYALLNLGKVSEAIAQADDLLQRNANLAGIRLMQGFALTYQA 584
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT 174
IS AI +Y+ ++DP N L +M Y ++ +L + W R +Y
Sbjct: 585 RISEAIASYDMSWQLDPAKTAPISNALFSMLYRDDLSPTELVQERSKWVNRLPTPPIKYE 644
Query: 175 SWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRF 234
W + +P RPL IGY+S D TH V++F+E LV H+ + Y D T R
Sbjct: 645 QWQSDPNPHRPLKIGYLSGDLRTHPVAFFLEPILVNHNAREVTSFCYDTGGIEDQTTTRL 704
Query: 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTW 294
+ + W + G D+ ++A + D IDILV+L+GHT+ N+ ++ CQPAP+Q+ +
Sbjct: 705 QNYSDR----WINCAGWDDLRLAEQIHNDAIDILVDLSGHTSGNRTQVLRCQPAPIQMIY 760
Query: 295 IGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT 354
IGYP ++GL IDY I D P + + E+++ + F C+ P PAL
Sbjct: 761 IGYPESSGLAEIDYIIADQYVAPADLDYLYTEKILHVAGSFWCFLPQDFLPEPQQLPALK 820
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPF----CCDSVRHRFLSTLE 410
NG++TFGSFNN +KI+P +++W+++L AVPNSRL++K C+ R +F++
Sbjct: 821 NGYLTFGSFNNSSKISPTTIRLWSQVLKAVPNSRLLLKALALEDKGTCEYFRGQFVAQ-- 878
Query: 411 QLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSV 470
G++ RV L L + ++Y +DI+LD FPY G TTTC++L+MGVP +++ G
Sbjct: 879 --GIDGTRVILEKPTLKIENFFESYHKIDIALDPFPYNGGTTTCQALWMGVPVISLRGQQ 936
Query: 471 HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQ 530
+ S LT +GL L E +Y+ +A++LA D+T L+ +R +LR +M KSP+ +G
Sbjct: 937 FCSRMSHSFLTNLGLPELSVATEADYIAIAVELAQDLTKLSQMRANLRSMMKKSPIMNGT 996
Query: 531 NFALGLESTYRNMWH 545
A LE YR W
Sbjct: 997 LAAEELEKAYRRAWQ 1011
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN G ++ A Y+ A + +A NL +D D +++A+ Y+ ++I
Sbjct: 370 YNYGNLLSQLALKTEAAQAYKKALELQNNFFQAHLNLANCLRDSDLIEEAIVHYRQVINI 429
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KPNF+ + NL V + E+ + +A P A N LG+ ++ G A+
Sbjct: 430 KPNFTLAYRNLTQVLVNLNRSVEVIEICQAWLAIEPHNLFALNALGISWQSQGKYQPALS 489
Query: 122 AYEQCLKIDPDSRNAGQN 139
++Q +K P+S ++ N
Sbjct: 490 CFQQAVKNAPNSADSLNN 507
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 43 KDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA 102
K L++A CYQ AL I ++ N G + + AA+ +KA+ + +A
Sbjct: 343 KQAGQLEQARTCYQEALGINDTIPEAWYNYGNLLSQLALKTEAAQAYKKALELQNNFFQA 402
Query: 103 YNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW 162
+ NL RD+ I AI Y Q + I P+ A +N L +N ++ E + W
Sbjct: 403 HLNLANCLRDSDLIEEAIVHYRQVINIKPNFTLAYRN--LTQVLVNLNRSVEVIEICQAW 460
>gi|196232459|ref|ZP_03131312.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196223531|gb|EDY18048.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 672
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 190/604 (31%), Positives = 299/604 (49%), Gaps = 64/604 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVEC-------- 54
NLG AY + + AIV Y A P EAC+NLG + + +D+A++
Sbjct: 76 NLGEAYRVSGRLEEAIVAYRRALCIQPGQPEACSNLGNVLRSVGRMDEAIDACRRATQLR 135
Query: 55 --------------------------YQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
Y+ AL I P+ +++ N+ G ++ A
Sbjct: 136 PGYVEAHLNLANALSEHGRSEEALAEYRCALEIDPHHAEAWNSYGSALVGMQRLVEAEAA 195
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+AI P +A A++NLG + + G A+ AY + L+I+P + N + + +
Sbjct: 196 FRQAIQWQPQHAGAWSNLGGVLAECGRHDEAVAAYRRALEINPADASVQSNLICTLQFHP 255
Query: 149 EGHDDKLFEAHRDWGKRFMRL-YSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAP 207
+ + E R W RF + + + N ++ ERPL IGYVSPD+ H V +
Sbjct: 256 TVEWETIAEERRAWNGRFGQAPTAAGARYTNVREAERPLRIGYVSPDFRDHVVGRNLLPL 315
Query: 208 LVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
HD ++++++ YS V + DA T FR + G+WR G + + M+++D +DI
Sbjct: 316 FREHDRRHFEILCYSGVAQPDAMTTEFR----RLAGVWRHTLGAADDALTRMIQQDGVDI 371
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP---------- 317
LV+LT H A ++L + A +PAPVQV++ GYP TTGL I YRI+D +
Sbjct: 372 LVDLTQHMARSRLTLFARRPAPVQVSFAGYPETTGLAAIPYRISDRYLESQIGVWRSEMG 431
Query: 318 ---------PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAK 368
P + + E + L + F CY P E P G +TFG NN K
Sbjct: 432 WKGEPELRSPNSVLRSAEHVFPL-DSFWCYDPGDEKVEGNELPCQQTGRVTFGCLNNFCK 490
Query: 369 ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLN 428
+ + + WARIL V SRL++ P S R R + LE+ G++ R++ +
Sbjct: 491 LNEQTWKSWARILRQVSGSRLILLSAP---GSHRQRVVDGLEREGIDPRRIEFVERAP-R 546
Query: 429 HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL 488
+++ Y +DI+LD+FPY G TT+ ++L+MGVP V+ AG G S L+ +GL L
Sbjct: 547 RGYLEYYQRLDIALDSFPYNGHTTSLDALWMGVPVVSRAGRGPLSRAGWSQLSNLGLPEL 606
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+A +ED+Y+++A++LA D+ L+ LR +LR M S + D F +E TYR MW +C
Sbjct: 607 VAFSEDDYIRIAVELAGDIPRLSELRATLRRRMEASVLMDAVRFTRQIEETYRAMWREWC 666
Query: 549 -KGD 551
+GD
Sbjct: 667 GRGD 670
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV ++ + + AI A NP+ A A NLG Y+ L++A+ Y+ AL
Sbjct: 40 LHLLGVIAHQVGQHEGAIELIGEAVQLNPNDAAALCNLGEAYRVSGRLEEAIVAYRRALC 99
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I+P ++ +NLG V G+MD A + +A P Y EA+ NL + G A+
Sbjct: 100 IQPGQPEACSNLGNVLRSVGRMDEAIDACRRATQLRPGYVEAHLNLANALSEHGRSEEAL 159
Query: 121 DAYEQCLKIDP 131
Y L+IDP
Sbjct: 160 AEYRCALEIDP 170
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A Y P A+A + LGVI + A+E A+ + PN + +L NLG Y
Sbjct: 22 AEAIYRQILAVEPRHADALHLLGVIAHQVGQHEGAIELIGEAVQLNPNDAAALCNLGEAY 81
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
V G+++ A +A+ P EA +NLG + R G + AIDA + ++ P
Sbjct: 82 RVSGRLEEAIVAYRRALCIQPGQPEACSNLGNVLRSVGRMDEAIDACRRATQLRP 136
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
L A Y+ L+++P + +L+ LGV+ G+ + A E+I +A+ NP A A NL
Sbjct: 18 RLADAEAIYRQILAVEPRHADALHLLGVIAHQVGQHEGAIELIGEAVQLNPNDAAALCNL 77
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
G YR +G + AI AY + L I P A N
Sbjct: 78 GEAYRVSGRLEEAIVAYRRALCIQPGQPEACSN 110
>gi|288941664|ref|YP_003443904.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
gi|288897036|gb|ADC62872.1| Tetratricopeptide TPR_2 repeat protein [Allochromatium vinosum DSM
180]
Length = 666
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 192/552 (34%), Positives = 292/552 (52%), Gaps = 13/552 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YNL + + D A ++E A NP ++ NNLG + +D +A++CY+ AL+
Sbjct: 112 FYNLAKLLQRLGRLDEARFYFEHALSINPLHLKSLNNLGSLLRDLGCTQEALDCYRRALA 171
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P+ ++L NLG + G++ A E ++A P + E +NLG + G + A+
Sbjct: 172 IHPSQPEALTNLGNLLLSLGQLHEALECQQRAARLQPGHPEILSNLGNALQHLGRLDEAL 231
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWD--- 177
D Y Q L I PD + L +NY + +++F A++ + +R Y SW
Sbjct: 232 DVYRQALTIRPDDTSIHGKLLFTLNYHPDQSAEQIFSAYQAFDQRIGVPYR--ASWQPPA 289
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
+ +DP+R L IGYVSPD+ HS+ +F+E L +HD+Q++++ Y+ + + D T +R
Sbjct: 290 SDRDPDRRLRIGYVSPDFRCHSIRHFLEPVLAHHDHQSFEITAYAELSQEDGLTAVYRRL 349
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
V + W +G+ + +A +R D IDIL++L GHT N+LG+ A +P PV VTW+GY
Sbjct: 350 VDR----WVPTHGLSDDVLAERIRADGIDILIDLAGHTGGNRLGVFARRPTPVSVTWMGY 405
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
TTGL IDY +TD++ P + E RL Y P+ + G V PAL NG
Sbjct: 406 GYTTGLSAIDYFLTDAIMAPAGCEPLFAERPWRLEAPSGIYRPASDMGEVGSLPALANGT 465
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+TFG+ ++ V++VW+ IL +P++RL++ K F ++V+ R G+E
Sbjct: 466 LTFGTLTRHVRLNHHVIRVWSEILRRLPHARLIIDSKDFATEAVQARLAERFAAHGIEPE 525
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ I + MDI LD FP+ T ESLYMGVP +T+A G
Sbjct: 526 RLS----IGYHSPPWDVLRTMDIGLDCFPHNSGATLVESLYMGVPFITLAARPSVGRSGS 581
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S+LT G IA +E +YV A+ LASD+ LA LR LR SP D F +E
Sbjct: 582 SVLTGAGHPEWIATSEADYVNKAVALASDLEHLAALRARLRADFEASPWRDEAGFVQRIE 641
Query: 538 STYRNMWHRYCK 549
YRNMW +C+
Sbjct: 642 RAYRNMWQHWCE 653
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + A+ + A +P AE N LG +D +++A Y A P
Sbjct: 47 LGAILTTTQRHQEAVSVLKTALKLSPEDAECLNTLGAALEDEGRMEEAGVLYARAARQAP 106
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
F + NL + G++D A E A++ NP + ++ NNLG L RD G A+D Y
Sbjct: 107 GFVAAFYNLAKLLQRLGRLDEARFYFEHALSINPLHLKSLNNLGSLLRDLGCTQEALDCY 166
Query: 124 EQCLKIDPDSRNA 136
+ L I P A
Sbjct: 167 RRALAIHPSQPEA 179
>gi|147840941|emb|CAN64348.1| hypothetical protein VITISV_025331 [Vitis vinifera]
Length = 565
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 156/181 (86%), Positives = 163/181 (90%), Gaps = 5/181 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ---- 56
MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ
Sbjct: 301 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQANSM 360
Query: 57 -MALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+ALSIKPNFSQSLNNLGVVYTVQGKMDAAA MIEKAI ANPTYAEAYNNLGVLYRDAG+
Sbjct: 361 LLALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIVANPTYAEAYNNLGVLYRDAGN 420
Query: 116 ISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTS 175
IS+AI+AYEQCLKIDPDSRNAGQNRLLAMNYINEG+DDKLFEAHR + LY +
Sbjct: 421 ISMAIEAYEQCLKIDPDSRNAGQNRLLAMNYINEGNDDKLFEAHRKTVWQVGPLYLFWVI 480
Query: 176 W 176
W
Sbjct: 481 W 481
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV Y EM+++D A+ YE A P AEA N+GVI+K+R +L+ A+ CY+ L++
Sbjct: 193 YNLGVVYSEMMQYDTALSCYEKAALERPMYAEAYCNMGVIFKNRGDLESAITCYERCLAV 252
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF + NN+ + T ++G ++ +KA+ N YA+A NLGV Y +
Sbjct: 253 SPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYYKKALYYNWHYADAMYNLGVAYGEML 312
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+AI YE +P A N L + Y + + DK E ++
Sbjct: 313 KFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRDNLDKAVECYQ 356
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+LG K N + ++ Y AL I P+++ + NLGVVY+ + D A EKA
Sbjct: 160 DLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAALER 219
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
P YAEAY N+GV++++ G + AI YE+CL + P+ A N +A+
Sbjct: 220 PMYAEAYCNMGVIFKNRGDLESAITCYERCLAVSPNFEIAKNNMAIAL 267
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+YE A +PH A A NLGV+Y + D A+ CY+ A +P ++++ N+GV++ +
Sbjct: 178 YYE-ALKIDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAALERPMYAEAYCNMGVIFKNR 236
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
G +++A E+ +A +P + A NN+ + D G+
Sbjct: 237 GDLESAITCYERCLAVSPNFEIAKNNMAIALTDLGT 272
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
KF A+ YE + EA G+ + ++ A E + A+ P +L +L
Sbjct: 61 KFADALAMYENILEKDNGNVEAHIGKGICLQMQNMGRLAFESFSEAIRQDPQNLCALTHL 120
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-------AGSISLAIDAYEQ 125
G++Y +G++ AAE +KA+ + +Y A L ++ D AG+ I Y +
Sbjct: 121 GILYKDEGRLLEAAESYDKALRIDSSYKPAAECLAIVLTDLGTSLKLAGNTQEGIQKYYE 180
Query: 126 CLKIDP 131
LKIDP
Sbjct: 181 ALKIDP 186
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
I + R+ A+ Y+ L ++ G+ +Q A E +AI +P
Sbjct: 55 ILRSRNKFADALAMYENILEKDNGNVEAHIGKGICLQMQNMGRLAFESFSEAIRQDPQNL 114
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
A +LG+LY+D G + A ++Y++ L+ID + A +
Sbjct: 115 CALTHLGILYKDEGRLLEAAESYDKALRIDSSYKPAAE 152
>gi|27380734|ref|NP_772263.1| hypothetical protein blr5623 [Bradyrhizobium japonicum USDA 110]
gi|27353899|dbj|BAC50888.1| TPR domain protein [Bradyrhizobium japonicum USDA 110]
Length = 708
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 290/545 (53%), Gaps = 8/545 (1%)
Query: 10 EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL 69
+ +D AI A P A A N + ++ +D+A+ A++++PN
Sbjct: 170 RLRNYDEAIASLNRALAIKPAYASALANRALALQELLRIDEAMADCNQAIAVEPNDMNGW 229
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
V+ M A EKAIA +P +A+ G+ G + A+ +Y++ L+I
Sbjct: 230 LGRASVWLQVQHMAEALHDSEKAIAVDPDAVQAHLVRGICLAALGRVDEALASYDRALEI 289
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW--DNTKDPERPLV 187
+PD +A N++ +++ + ++ A + W +R ++ + DN++DP+RPLV
Sbjct: 290 EPDFPSAISNKIFTLDFAADASVEQHQRARQVWWERIGAKFASEAARPHDNSRDPDRPLV 349
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
+GYVS D+ HS ++ + L Y D +++V YS K DA T F +K+ + WRD
Sbjct: 350 LGYVSSDFNAHSAAFIFKPVLQYRDRAQFEIVCYSCSSKVDAATDEF-QKIADR---WRD 405
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
+ ++AA +R D +DIL++L+GHT N+LG+ A +PAP+Q G+ TGLPTID
Sbjct: 406 ASQWSDDRLAAEIRADGVDILIDLSGHTKGNRLGVFARKPAPIQAHGWGHGTGTGLPTID 465
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLA 367
Y +D +A P + E ++ LP CF+ P P TPA++NGF+TFG FN ++
Sbjct: 466 YLFSDPVAIPAAVRHLFAETVVDLP-CFVTLEPLPIELARASTPAISNGFVTFGVFNRIS 524
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
KI+ + Q W+RIL VP SRL++K VR L+ L G+ + RVDLL L
Sbjct: 525 KISDQAAQAWSRILERVPGSRLLIKDVALDDQLVRDNLLARLATCGVPAERVDLLGTTL- 583
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH 487
DH+ +++ +DI+LD FP G +T E+L MGVP V G+ S+LT +GL
Sbjct: 584 RVDHLASFNRVDIALDPFPQNGGVSTLEALQMGVPVVAKLGNSLPSRAAGSILTALGLPD 643
Query: 488 LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
+ +E+ YV +A+ A+++ L LR L + +P C+ +A + YR MW RY
Sbjct: 644 WVTDSEEAYVDIAVSRATEIDDLDKLRRELPGQVRAAPACNPVAYAQAADEAYRAMWKRY 703
Query: 548 CKGDV 552
C D
Sbjct: 704 CSSDA 708
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG + + A + A +P A+A + GV +A E Y+ AL+
Sbjct: 60 LHMLGSLESDTKNYQQAEILLSRAVAVDPRSADAHMSRGVALNGLRRHGEACESYRRALA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PNF+ +L+NLG +V + A +KA+A + AEA+N G + + AI
Sbjct: 120 LRPNFAVALSNLGNA-SVTLDLQEALACFDKALAIDGNLAEAHNGRGWVLCRLRNYDEAI 178
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYI 147
+ + L I P +A NR LA+ +
Sbjct: 179 ASLNRALAIKPAYASALANRALALQEL 205
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
GVA + + A Y A P+ A A +NLG D L +A+ C+ AL+I N
Sbjct: 98 GVALNGLRRHGEACESYRRALALRPNFAVALSNLGNASVTLD-LQEALACFDKALAIDGN 156
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+++ N G V D A + +A+A P YA A N + ++ I A+
Sbjct: 157 LAEAHNGRGWVLCRLRNYDEAIASLNRALAIKPAYASALANRALALQELLRIDEAMADCN 216
Query: 125 QCLKIDPDSRNAGQNR 140
Q + ++P+ N R
Sbjct: 217 QAIAVEPNDMNGWLGR 232
>gi|66362020|ref|XP_627974.1| spindly like TPR repeats, predicted plant origin [Cryptosporidium
parvum Iowa II]
gi|46227521|gb|EAK88456.1| spindly like TPR repeats, predicted plant origin [Cryptosporidium
parvum Iowa II]
Length = 1032
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 205/635 (32%), Positives = 317/635 (49%), Gaps = 107/635 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG+ Y E+ K + AI ++L+ HFNP A +N G+I + +D+A+ CY+ I
Sbjct: 379 DLGIIYYELGKEEKAIWCFKLSIHFNPMNVNAYDNFGIILRKLGFIDQAILCYERISRIN 438
Query: 63 PNFSQSLN----------------------------------NLGVVYTVQGKMDAAAEM 88
N +LN NLGV+Y G A
Sbjct: 439 QNCITTLNVIAALYGNIGKIDESYEYFKRCIEVNQGVPDVYNNLGVLYRDCGNFLMAKNC 498
Query: 89 IEKAIAANPTYAEAYNNL-----------------GVLYRDAGSISLAIDAYEQCLKID- 130
A+ +P + A+ NL + SI + E+ L +D
Sbjct: 499 FLVALELDPNHTLAFQNLLYILNYFIPLDNPKLIGNIRNNSIESIINNLKDSEKSLCLDI 558
Query: 131 ---PDSRNAGQNRLLAMN---YIN--EGHD------DKLFEAHRDWGKRFMRLYSQYTSW 176
P+S ++++ N YIN + +D DK E HR+ R L
Sbjct: 559 SSTPESY-VCESQIWINNSDYYINYQDMYDLSLEWGDKFIEIHREIKNRLDDLIPIAEIP 617
Query: 177 DNTKDPERPLV-IGYVSPDYFTHSVSYFIEAPLVY-----------------HDYQNYKV 218
D ++ L+ IG+V +YF H+V++FI AP+ + + +
Sbjct: 618 DIESTSDKQLINIGFVGAEYFHHAVAFFILAPIKFLIKNFSKNSTRDCNIEGNSQVKLNI 677
Query: 219 VVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANN 278
+Y D + F++ + + WR I+G D + + ++R D I IL +L+GHT NN
Sbjct: 678 FIYDNSPHHDYYSCFFKDLIPSEN--WRYIHGKDIEFSSKLIRSDNIHILFDLSGHTVNN 735
Query: 279 KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY 338
L + A + +P+Q++WIGYPNTTGL IDYRITD + DP TKQK+ E+L+ LP CFLCY
Sbjct: 736 CLALFALKNSPIQISWIGYPNTTGLKYIDYRITDKIVDPLHTKQKYSEKLLYLPNCFLCY 795
Query: 339 T-PSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC 397
T P + P+ P NGFITFGSFN + K+ P +++W +L +VP S L++K K F
Sbjct: 796 TLPKIQHPPISEPPMKKNGFITFGSFNRVTKLHPLTIELWGEVLKSVPESHLLLKSKAFS 855
Query: 398 CDSVRHRFLSTLE-QLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
S + +L + + ++ R+ L+PL + H++ Y+ +DISLDTFPYAGTTTT E
Sbjct: 856 SQSCCNFYLEIFKSKYNIQPHRISLIPLSNSYYSHLELYNDIDISLDTFPYAGTTTTFEC 915
Query: 457 LYMGVPCVTMA------------------GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
++MGVP +T++ S H+ NVG S+LT + L LIA N+ E+++
Sbjct: 916 IFMGVPLITLSIDQSENSQIDSSDIYTEISSFHSQNVGRSILTNLNLNELIASNKKEFIK 975
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
AL LA+D L R +LR ++++S +CDG+ F+
Sbjct: 976 AALSLANDTERLIYYRSNLRRILTESKLCDGEKFS 1010
>gi|53804390|ref|YP_113965.1| hypothetical protein MCA1509 [Methylococcus capsulatus str. Bath]
gi|53758151|gb|AAU92442.1| TPR domain protein [Methylococcus capsulatus str. Bath]
Length = 699
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 292/589 (49%), Gaps = 48/589 (8%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG AY D+ I + A +P EA NLG+ + +AV ++ L I
Sbjct: 89 FNLGNAYLADGAIDLGIQALQDATRLDPERMEAWMNLGLALVEAKRHPEAVAAFERLLEI 148
Query: 62 KPN------FSQSLNNLGVVYTVQGKMDAAAEMIEKAI---------------------- 93
P+ F+ +L G++ +D ++E +
Sbjct: 149 DPDHEADVAFASALVGAGIMLKESAMVDRGISVLESKLRDGYERYAAGVILARALEHRNR 208
Query: 94 ------------AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRL 141
ANP + NNL G + A Y C+K PD +A L
Sbjct: 209 LSEAIRQHQALLEANPEHIGIRNNLARCLVQLGRVEEARTHYRLCVKSAPDKYHAFSALL 268
Query: 142 LAMNYINEGHDDKLFEAH-RDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHS 199
+NY + EA R+W K+ + Y + N +DPERPL IGY+SPD H
Sbjct: 269 AGLNY-EPNLTAAMHEAEVRNWEKQLALPHYPVEPEFPNERDPERPLKIGYLSPDLRQHV 327
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
V + L + + + + V Y K D + R + WR ++G + +VAA+
Sbjct: 328 VGHNFLPVLEHRNREQFSVFCYHIGEKQDDMSRR----IAALADHWRHVHGASDDEVAAL 383
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE 319
+RED++DILV+L+GHT++ + + A +PAPVQV+W+GY +TTGL T+D+ ITD + PP+
Sbjct: 384 IREDRVDILVDLSGHTSHTQPLVFARKPAPVQVSWLGYFDTTGLATMDWFITDPYSSPPD 443
Query: 320 TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
KQ E L R+P L Y P P+ V PA NG+ITFG NNLAKI +VL +WA+
Sbjct: 444 QKQYFSERLYRMPHTRLYYHPYPDMPAVGQLPAKRNGYITFGCLNNLAKINTEVLDLWAQ 503
Query: 380 ILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMD 439
IL A P SRL+++ C RF + + GL+ R++L P L Q Y +D
Sbjct: 504 ILAASPTSRLLIQTVALCDRLNLERFRALCVERGLDPARLELRPATSLE-KFAQTYHQID 562
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
I+LD FP+ G T+ ++L+MGVP +T+ A +S+L +GL HLIA N+ +YV +
Sbjct: 563 IALDPFPFCGGFTSFDALWMGVPVITLEQQRLAGRQTLSMLMNLGLPHLIASNKTDYVSI 622
Query: 500 ALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
AL+L+ D + + LR LR +SP+ D F LE YR W +C
Sbjct: 623 ALELSRDSSEIEQLRSELRSRFLQSPLIDHCRFTRELEKAYRFFWSHWC 671
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P+ A + GV+ + +AV AL PN S NLG Y G +D +
Sbjct: 47 KPNDANILHLAGVVALRKGQNSRAVALISKALEYAPNESLYYFNLGNAYLADGAIDLGIQ 106
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
++ A +P EA+ NLG+ +A A+ A+E+ L+IDPD
Sbjct: 107 ALQDATRLDPERMEAWMNLGLALVEAKRHPEAVAAFERLLEIDPD 151
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 44 DRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY 103
++ +DKA + L KPN + L+ GVV +G+ A +I KA+ P + Y
Sbjct: 29 EKGQIDKAEQAVLTLLERKPNDANILHLAGVVALRKGQNSRAVALISKALEYAPNESLYY 88
Query: 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
NLG Y G+I L I A + ++DP+ A N LA+
Sbjct: 89 FNLGNAYLADGAIDLGIQALQDATRLDPERMEAWMNLGLAL 129
>gi|209517117|ref|ZP_03265964.1| TPR repeat-containing protein [Burkholderia sp. H160]
gi|209502510|gb|EEA02519.1| TPR repeat-containing protein [Burkholderia sp. H160]
Length = 779
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 195/550 (35%), Positives = 289/550 (52%), Gaps = 25/550 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG A + + A + A +P A+A NNLG + A + Y AL
Sbjct: 245 YNLGNALQGLGRHTEAATQFRRATALDPGFADAFNNLGNVCTLLGETSAAADAYDAALRA 304
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P F + NN + G D A + A+A + ++ NNLG + +D+G++ AI
Sbjct: 305 RPGFIAAHNNAANLRRSLGLFDEAIVHLRLALATDARHSATLNNLGNVLKDSGALDDAIG 364
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFM-RLYSQYTSWDNTK 180
Y Q + DP + A N + A+N+ E D L EA +W R R +++
Sbjct: 365 CYRQAIACDPRNALAHSNLVYALNFQAETADIVLAEA-LEWSARHEPRKHAE-------- 415
Query: 181 DPERP------LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRF 234
P RP L IGYV D+ H + F+ L +HD +++ Y++V + DA T R
Sbjct: 416 -PARPRAARERLRIGYVGADFRDHCQALFLVPLLAHHDRSAFEITCYASVARPDALTQRL 474
Query: 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTW 294
V + WRD++G+D+ ++A +R+D IDILV+LT H A+ + + A +PAPVQ TW
Sbjct: 475 AGYVER----WRDVHGLDDAQLAQQIRDDGIDILVDLTMHMADGRPALFARRPAPVQATW 530
Query: 295 IGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT 354
+ YP TTGL +ID+R+TD DPP + E IRL + F CY P + V PAL
Sbjct: 531 LAYPGTTGLASIDFRVTDPHLDPPAHDHFYRERSIRLADSFWCYDPLADEPAVTVPPALA 590
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
G +TFG NN K+T + LQ+WA + +P++RL+V S R + L + G+
Sbjct: 591 AGHVTFGCLNNPCKLTDRTLQLWAGVFARLPDARLIVLAPQ---GSGRTQLLERMRAHGI 647
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
+ RVD +P D++ +Y +DI+LDTFPY G TTT ++L+MGVP VT G
Sbjct: 648 DVTRVDCVPF-QRRADYLASYHAIDIALDTFPYNGHTTTLDALWMGVPIVTRVGQTAVGR 706
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
G+ L + L L A ++ +V+ A+ LA D+ L L LR + +SP+ DG FA
Sbjct: 707 GGLCQLANLDLLALAADSDAAFVEAAVALARDLARLQTLHRELRGRLERSPLMDGGRFAR 766
Query: 535 GLESTYRNMW 544
LE+ YR MW
Sbjct: 767 QLEAAYRRMW 776
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
LG ++ D A+ A +P A NLGV R ++A + A++
Sbjct: 178 QLGTLLDQLGHHDEALALLREAVRVDPRAPAALINLGVALCARRAFEEATDVLAQAVTHA 237
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
P+ + + NLG G+ AA +A A +P +A+A+NNLG
Sbjct: 238 PSNTDAAYNLGNALQGLGRHTEAATQFRRATALDPGFADAFNNLG 282
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ ++ D A Y A P A A LG + + D+A+ + A+ +
Sbjct: 144 NLGNSHRQLGALDAAGRAYRAALAAQPAHALALTQLGTLLDQLGHHDEALALLREAVRVD 203
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +L NLGV + + A +++ +A+ P+ +A NLG + G + A
Sbjct: 204 PRAPAALINLGVALCARRAFEEATDVLAQAVTHAPSNTDAAYNLGNALQGLGRHTEAATQ 263
Query: 123 YEQCLKIDPDSRNAGQN 139
+ + +DP +A N
Sbjct: 264 FRRATALDPGFADAFNN 280
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 51/123 (41%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A YE A P A+ LG++ + + A+ A++I P + V
Sbjct: 22 ARALYETALAEQPENADIRLRLGILELQCGDGESALAQLDRAIAIAPGDVRHRAMRAHVL 81
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
G+ AA + +AI +PT AE + LG + G AIDAY L DP + +
Sbjct: 82 HSLGRFAQAAATLREAITLDPTDAELHAALGNALQAQGDHHAAIDAYTSALARDPANADF 141
Query: 137 GQN 139
N
Sbjct: 142 ASN 144
>gi|186477743|ref|YP_001859213.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
gi|184194202|gb|ACC72167.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
Length = 708
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 294/544 (54%), Gaps = 5/544 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E AI +A P +A +LG + + + A++ Y AL+++
Sbjct: 138 NLGHTLREAGDPAAAIDSCTVATRLKPDLPQAWTHLGNALLELGSDEGALDSYMKALALQ 197
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + + NN+G + G+ AAE +A+A P A +NNLG + RD G + A
Sbjct: 198 PNDANAHNNVGNILEKYGRAAGAAESYRRALALEPHRASLHNNLGNVLRDQGQLDQATAC 257
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
Y Q + +DP A N LL +N + + F+ R +G+ + N D
Sbjct: 258 YRQAVALDPGFAQAHSNLLLLLNSRLDVALREQFDEARAFGEHQSAKAQPFQHSANANDA 317
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
R L +G+VS D +H V +F+E+ L + D ++V Y+ + DA + +++M +
Sbjct: 318 GRRLRVGFVSGDLNSHPVGFFLESVLGHLDRTRIELVAYATRKREDAVS----QRLMPQF 373
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
W DI +D+ A +R+D IDILV+L+GHT +N+L + A +PAPVQ TW+GY TTG
Sbjct: 374 SAWHDISRLDDAACARRIRDDGIDILVDLSGHTNHNRLSVFAWKPAPVQATWLGYFATTG 433
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
L IDY I D P + + VE LP+ +LC+TP P V P PA NG ITFG
Sbjct: 434 LAAIDYVIADRHVLPLDEASQFVEAPWHLPDSYLCFTPPPFDIEVGPLPASANGAITFGC 493
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN+L K+ V+ +WAR+L A+P SRL++K + +V+H L+ G++ R+ +L
Sbjct: 494 FNHLVKLNEAVVALWARVLDAMPGSRLLLKTRQLDDPAVQHATLARFAAHGIDGARL-ML 552
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ + AY+ +DI+LD FPYAG TT+ E+L+MGVP +T G +VG S++
Sbjct: 553 EGQSPRAELLAAYNRVDIALDPFPYAGGTTSIEALWMGVPVLTRRGERFLSHVGESIVDT 612
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
VGL IA ++ +Y+ A+++ LA LR +LR + SP+CD FA LE +
Sbjct: 613 VGLPDWIASDDADYIAKAVRVGVQRDELATLRRTLRQRLLASPLCDAPRFARHLEDAFHG 672
Query: 543 MWHR 546
MW R
Sbjct: 673 MWAR 676
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LGV ++ I E + +P+ A NNLG + +L A+ Y+ ALS
Sbjct: 69 MHFLGVLACDVGNLPAGIDLIEKSIQLHPN-AIYLNNLGNMRGRARDLQGAIAAYRAALS 127
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P+++Q+ +NLG G AA + A P +A+ +LG + GS A+
Sbjct: 128 LAPDYAQAHSNLGHTLREAGDPAAAIDSCTVATRLKPDLPQAWTHLGNALLELGSDEGAL 187
Query: 121 DAYEQCLKIDPDSRNAGQN 139
D+Y + L + P+ NA N
Sbjct: 188 DSYMKALALQPNDANAHNN 206
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA 92
+A + LGV+ D NL ++ + ++ + PN + LNNLG + + A A
Sbjct: 67 DAMHFLGVLACDVGNLPAGIDLIEKSIQLHPN-AIYLNNLGNMRGRARDLQGAIAAYRAA 125
Query: 93 IAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
++ P YA+A++NLG R+AG + AID+ ++ PD
Sbjct: 126 LSLAPDYAQAHSNLGHTLREAGDPAAAIDSCTVATRLKPD 165
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+A ECY+ L +++ LGV+ G + A ++IEK+I +P A NNLG +
Sbjct: 50 EAAECYKQILQHDGMHPDAMHFLGVLACDVGNLPAGIDLIEKSIQLHPN-AIYLNNLGNM 108
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A + AI AY L + PD A N
Sbjct: 109 RGRARDLQGAIAAYRAALSLAPDYAQAHSN 138
>gi|117923609|ref|YP_864226.1| hypothetical protein Mmc1_0293 [Magnetococcus marinus MC-1]
gi|117607365|gb|ABK42820.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus marinus MC-1]
Length = 789
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 280/548 (51%), Gaps = 7/548 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV YG ++ A+ + A P+ NL V+ LD+A + A++
Sbjct: 248 NLGVIYGRQGRYTEALHLFRHANAVTPNHLFTGYNLAVLCLQIGQLDEAQALLEQAIAHH 307
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P N LG VY Q K A + A+ P E+Y LG LYR++ ++ A
Sbjct: 308 PQQVALRNTLGQVYARQLKFTQAIQCFHAALQQQPQ-CESYLQLGTLYRNSAQLAEAKQC 366
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
+Q + +DP++ A ++L +Y+ + H ++ R +G+ + P
Sbjct: 367 NDQAVLLDPENLEARTHQLFLAHYLPDAHQAQMLAQARAFGQLVAGRAKPFAH-AVPASP 425
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+PL +G VSPD H V YF+E+ + D Q + Y++ DA T R + ++
Sbjct: 426 PKPLRVGLVSPDLRGHPVGYFLESIVHAMDGQRIMLCAYNSGPPGDALTQRLQSRMAH-- 483
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WRDI + + +VA ++R+D IDILV+L GHTA N+L + A +PAP+QVTW+GY TTG
Sbjct: 484 --WRDIEFMSDAQVAQLIRQDGIDILVDLAGHTAKNRLALFAWKPAPIQVTWLGYSATTG 541
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+ IDY + D +VE++ +LP LC+TP V PAL GF+TFG
Sbjct: 542 VSQIDYIMGDPYTLRAHEAAHYVEKMWQLPHSHLCFTPPDLELEVNALPALQQGFVTFGC 601
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN L KI +VL WA IL +P+SRL +K + V + + + LG+ + R+ +L
Sbjct: 602 FNKLTKINDEVLSCWAEILQRLPSSRLYLKQGIYANAEVAQQLYARFQALGIGAERL-IL 660
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ + Y +D++LD FP+ G TT+ E L+MGVP VT+ G+ + G S+L
Sbjct: 661 EGGSDREGYFRCYHRVDMALDPFPFPGGTTSVEGLWMGVPLVTLQGNRFMAHQGESILQH 720
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
GL H IA++ YV+ + A D+ ALA LR LR + SP+ D A L +
Sbjct: 721 AGLAHWIAQDRHAYVEKVIAFAKDLPALAQLRHGLRQQVLASPLFDAPLMATDLMQAWEQ 780
Query: 543 MWHRYCKG 550
MW Y G
Sbjct: 781 MWQIYQNG 788
>gi|374293478|ref|YP_005040513.1| hypothetical protein AZOLI_3149 [Azospirillum lipoferum 4B]
gi|357425417|emb|CBS88304.1| protein of unknown function; putative TPR repeat domains
[Azospirillum lipoferum 4B]
Length = 896
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 284/531 (53%), Gaps = 16/531 (3%)
Query: 26 HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA 85
H HC+ + + + A+ ++ AL+++P+ + + N+G V G+ + A
Sbjct: 364 HAVRHCSR--TEGATVTGEYEKAGDALGWFRRALALRPDSAFAWTNVGAVMADAGRGEEA 421
Query: 86 AEMIEKAIA--ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
A ++ +A+A A A A++NLG+ G + A+ A+ + L I P N L
Sbjct: 422 AVVLHRALAIGAADHEASAWSNLGLACMITGLHAEAVAAFRKSLDIVPGDAAMRSNLLFC 481
Query: 144 MNYINEGHDDKLFEAHRDWGKRFMRLYSQYT-SWDNTKDPERPLVIGYVSPDY--FTHSV 200
+ + E ++F HR + +RF+R ++ + D +R L IGY+SPD+ +
Sbjct: 482 LCFTEEAALGEVFAEHRAF-ERFVRPATRRPPAAPRMPDADRRLRIGYLSPDFQRYPGPG 540
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
+F+ PL +HD +++ Y + D T RFRE + G WR + ++ + A +
Sbjct: 541 YHFLLPPLTHHDRTGFEIYCYYNDRREDEATRRFRE--IADG--WRACAHLSDEALDAQI 596
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
R D IDILV+ GH A N++ + +PAP+Q+++ YPNTTGL +DY+ D L PP
Sbjct: 597 RADGIDILVDCGGHMARNRMPLFLGRPAPLQISFPLYPNTTGLTAMDYQFADPLFAPPSA 656
Query: 321 KQKHVEELIRLPECFLCYTPSPEA-GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
+ H E LIRLP C LCY P+ A P P L +G TFGSFNN K+ + +WAR
Sbjct: 657 DELHSEALIRLPGCVLCYRPAESAYHPPERAPGLADGTFTFGSFNNPTKLNASTIALWAR 716
Query: 380 ILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMD 439
+L AVP +RL++K + S+ R L+ LG+ D L L D ++Y +D
Sbjct: 717 VLHAVPRARLMLKWRGLTSSSLGGRLLAQFAALGIAG---DRLILSGTTPDPYESYRRID 773
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
LD G TTTC+SL+MGVP +++AG+ G+SLL+ VGL L+A ++D YV L
Sbjct: 774 CGLDPVFANGGTTTCDSLWMGVPVLSIAGTAAISRWGISLLSAVGLPDLVADDDDSYVAL 833
Query: 500 ALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
A++LA D LA R LR M +SP+ D Q + LE+ YR W R C G
Sbjct: 834 AVRLAGDPDLLAAKRDGLRARMQRSPLMDEQGYTRALEAGYREAWRRRCAG 884
>gi|291613082|ref|YP_003523239.1| hypothetical protein Slit_0612 [Sideroxydans lithotrophicus ES-1]
gi|291583194|gb|ADE10852.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
Length = 834
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 283/580 (48%), Gaps = 41/580 (7%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ +F A V Y A P AEA NLG K + L++AV Y+ AL I
Sbjct: 255 NLGATLHDLGRFGEAEVSYRCAIQLKPGLAEAHYNLGNTLKSQGKLEEAVASYRKALQIA 314
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG QGK+ A ++ + +NP EAY+NLG D G + A
Sbjct: 315 PGLVGASSNLGAALQAQGKLAEAETILRNVLQSNPDSLEAYSNLGSTLHDMGRLEEARSE 374
Query: 123 YEQCLKIDPDSR----------------------------------NAGQNRLLAMNYIN 148
YE+ L+I PD A N L ++NY +
Sbjct: 375 YEKALRIKPDHAEILSNLGNTLMTMGLQEEAVRCFRDALEYKPDFLKARSNLLFSLNYSS 434
Query: 149 EGH-DDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAP 207
+D L EA R + +++ W P+R L +G VS D H V YF+E+
Sbjct: 435 SSSPEDCLAEACRYGEIVSSKAAAKFNRWPVAISPKR-LRVGLVSADLRNHPVGYFLESV 493
Query: 208 LVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
L + ++ Y A K+D T R + W I+G+ ++ A ++ +DKI I
Sbjct: 494 LAQLATSSVELFSYPAFHKSDELTARIKRHF----SAWHPIHGMSDEAAARLIHDDKIHI 549
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
L++L+GHT N+L + A +PAP+Q +W+GY TTG+ IDY I D P E
Sbjct: 550 LIDLSGHTRLNRLPIFAWKPAPIQASWLGYFATTGVAEIDYVIGDPYVSPVGESAHFSES 609
Query: 328 LIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
+ +LPEC+ C++ V PAL G ITFG FNNL+K+ V+ +WA+IL A+P +
Sbjct: 610 IWQLPECYWCFSAPDSKVEVSALPALQAGHITFGCFNNLSKMNDAVVALWAKILSAIPGA 669
Query: 388 RLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY 447
+L +K SVR L G+ R+ +L +++ +Y +DI+LD FPY
Sbjct: 670 KLFLKYSQLNDPSVRDATLQRYAMHGIGKERL-ILEGSSPRAEYLASYHRVDIALDPFPY 728
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G TT+ ESL+MGVP +T G + G ++ GL +A +ED+Y+ A+ +SD+
Sbjct: 729 PGGTTSMESLWMGVPVLTRRGDRFLAHAGETIACNAGLDTWVATDEDDYLAKAVSFSSDL 788
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
LA LR LR + SP+ D FA E+ MW ++
Sbjct: 789 ARLAKLRAGLRSQVLSSPIFDAPRFAGHFENAMWGMWKKW 828
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGV + + + A+ + A P A+A +NLG LD+A ++ AL I
Sbjct: 188 LGVVLQHLGRNEEALQPMQRAVELAPKDAQAHSNLGNTLSYLGRLDEAETSFRRALKINK 247
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+F+++ NLG G+ A AI P AEA+ NLG + G + A+ +Y
Sbjct: 248 DFAEAHLNLGATLHDLGRFGEAEVSYRCAIQLKPGLAEAHYNLGNTLKSQGKLEEAVASY 307
Query: 124 EQCLKIDPDSRNAGQN 139
+ L+I P A N
Sbjct: 308 RKALQIAPGLVGASSN 323
>gi|163852228|ref|YP_001640271.1| hypothetical protein Mext_2809 [Methylobacterium extorquens PA1]
gi|163663833|gb|ABY31200.1| TPR repeat-containing protein [Methylobacterium extorquens PA1]
Length = 717
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 279/532 (52%), Gaps = 12/532 (2%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A + +A + P A ++LG + + AV + A+++ PN + + +NL VY
Sbjct: 184 AFDLFSIAIYREPDNAGYFSSLGAVLIAMGDYTGAVSALERAVALNPNLAIAHSNLSGVY 243
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
AA +A+A + + A+NNLG + G + A+ ++++ L DP A
Sbjct: 244 QRVSHHSAAVTHARRAVALDAGLSNAHNNLGCSLKSLGHLPEALASFDRALATDPTHITA 303
Query: 137 GQNRLLAMNYINEG--HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPD 194
NRL Y EG H D +A R +G RF + + N +DPER L IG+VS D
Sbjct: 304 HSNRLFTKLYA-EGVPHADYAADA-RSFGARFADPLLRRRPFANDRDPERRLRIGFVSGD 361
Query: 195 YFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEK 254
TH+V+ FIE L + D ++ Y DA + R R + G W +I G+D+
Sbjct: 362 LCTHAVARFIEPFLRHLDRTQFEARAYMTQAAEDAVSARLR--TLFDG--WHNITGLDDD 417
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
+ A ++ +KIDILV+L+GH+A ++L + A +PAPVQVTW+G+P TTGL +DYR+TD+
Sbjct: 418 EAADLIESEKIDILVDLSGHSAGHRLLVFARKPAPVQVTWMGHPATTGLRAMDYRLTDAR 477
Query: 315 AD-PPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT-NGFITFGSFNNLAKITPK 372
D P +T+ H E + +P Y + PV P NGF+TFG N KI+
Sbjct: 478 LDVPGQTESLHTETVWWMPGVSATYEAHHDIPPVRERPPFEDNGFVTFGVMNRFEKISDG 537
Query: 373 VLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
+ WA IL A+PN+RL + +R + + L G+ RV L P + +
Sbjct: 538 AFKTWAAILEALPNARLFMVVADVETAVIREQVNARLSMAGIPQDRVRLHPRVTTTY--F 595
Query: 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKN 492
Y DI+LD+FPY G TT+C++L MGVP + + GS VG SLL +GL+ L+
Sbjct: 596 DLYHEFDIALDSFPYNGGTTSCDTLCMGVPFIALRGSQAVSRVGSSLLEAIGLEELVGDT 655
Query: 493 EDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
++Y AL+LA D L +R +LR+ M PV D FA + +R+MW
Sbjct: 656 PEDYATRALELARDPDRLRAIRTNLRERMFAGPVMDHARFARDMGDAFRSMW 707
>gi|392378662|ref|YP_004985822.1| tetratricopeptide TPR_2 repeat protein (fragment), partial
[Azospirillum brasilense Sp245]
gi|356880144|emb|CCD01093.1| tetratricopeptide TPR_2 repeat protein (fragment) [Azospirillum
brasilense Sp245]
Length = 720
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 286/551 (51%), Gaps = 15/551 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y LG G M +F + P AEA +NLG++ + + ALS
Sbjct: 178 LYALGDRSGAMREFRHTLAL-------APGHAEALSNLGLLLDETGRTADGATACRRALS 230
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P + NL G+ AAAE +A+A +P +A A++NL G + ++
Sbjct: 231 VQPGHVEGWVNLSAACETLGRYGAAAEAARRALALHPGHAGAFSNLAGALGLMGRVEESL 290
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
++ +++DPD R+A L A+ Y N L E R W +RF + N
Sbjct: 291 PLLQRAVRLDPDDRDARSRYLCALLYRNGQDGAGLLEESRRWAERFA-VAEPLPRPANEP 349
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+R L +G VS D+ H+ S+++E D ++ YS DAKT RFR +
Sbjct: 350 DPDRRLRVGLVSGDFRNHAFSFYMEPLFRAFDRSLVELFFYSTATAPDAKTERFRALADR 409
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W D + E+++A VR+D +DILV+L HTA N+LG+ +PAPVQVT T
Sbjct: 410 ----WCDAAALTEEELAVRVRQDGVDILVDLASHTAGNRLGVFTRRPAPVQVTTAVNIVT 465
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TG+ D ITD+L PP + + E L+RLP Y PEA V P PA NGFITF
Sbjct: 466 TGIDRFDACITDALLAPPGEEAHYAEPLLRLPRFSWAYQGPPEAPEVGPLPASRNGFITF 525
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNNL+KIT + +WA +L AVPNSRL++K K + R + G+ S R++
Sbjct: 526 GSFNNLSKITEETAALWAGVLRAVPNSRLLLKYKAMRDPASRAHLTALFACHGVASDRLE 585
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH---AHNVGV 477
L H ++ Y+ MDI LD +PY G TTTCE+L+MGVP + AG + VG
Sbjct: 586 LRRPPAGIHANLADYNDMDIGLDPYPYNGHTTTCEALWMGVPVIVPAGRLRDLGIARVGS 645
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+++ GL LIA + D Y A+ LA D+ ALA LR LR + SP+ D A E
Sbjct: 646 AMMVSAGLSELIAPDADAYAARAVALAGDLDALATLRAGLRSRVMSSPLGDVPALARAYE 705
Query: 538 STYRNMWHRYC 548
+ +R +W R+C
Sbjct: 706 AAFRTLWRRWC 716
>gi|395762104|ref|ZP_10442773.1| TPR domain-containing protein [Janthinobacterium lividum PAMC 25724]
Length = 1070
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 190/556 (34%), Positives = 297/556 (53%), Gaps = 15/556 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGVA ++ ++D A Y A NP A NLG + + ++A YQ A+++
Sbjct: 508 NLGVALQKLKRYDDANAAYLRALEINPKNVSAICNLGNVLLAQQKYEQAQTRYQAAIALD 567
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F ++ LG + + AA E +A NP Y +AY N+G + G I AI+A
Sbjct: 568 PTFERAHFALGNCHVLTNAPTAALECYRAVLALNPEYRDAYVNIGSTLSNLGQIDEAIEA 627
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKD 181
LK+ P N L +++ + LFE H + F + NT+D
Sbjct: 628 CRAGLKVCPLWDTLFSNYLFLLSHSADIDATTLFEEHLRFSDTFETHMAKNAKEHTNTRD 687
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA--DAKTIRFREKVM 239
R L +G VS D H V +FI P++ + + + +Y+ A D + R RE +
Sbjct: 688 ALRTLKVGLVSGDLHNHPVPHFI-IPVLENIRSDAGLSLYAYHNNAQDDHVSQRLREVIP 746
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
WR + +D+ ++A +R+D IDIL++L+GHT N+L + A +PAP+Q +WIGYP
Sbjct: 747 H----WRQVEQMDDLELAQQIRDDGIDILIDLSGHTGKNRLLLFASKPAPIQASWIGYPL 802
Query: 300 TTGLPTIDYRITDSLADPPET-KQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGL +DY +TD P + E+L+ LP C + PS A + P PALTNG++
Sbjct: 803 TTGLRAMDYYLTDPYFAPDGILDSQFTEKLVLLPSCS-PFLPSEYASGIRPAPALTNGYL 861
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRF-LSTLEQLGLESL 417
TFGSFN + KI KV+ W+ +L A+P++R+++ P S H + LE+ G+
Sbjct: 862 TFGSFNRITKINRKVIARWSMLLRAIPDARMLLAAMP---TSAPHPLIMRWLEEEGIAPE 918
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ + M+ + +DI LDTFPY G TTT +L+MGVP +T AG+ +G
Sbjct: 919 RLTFEGRTGITQ-FMEMHHRVDICLDTFPYGGGTTTFHALWMGVPTLTTAGTTLPSRIGT 977
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S+L +VGL+ IAK++D+YV+ A +A++ L R S+R + +S + + + GL+
Sbjct: 978 SILLQVGLEEFIAKDDDDYVRKAQAMAANPMLLGAYRYSMRHRLERSAMGNPELITEGLQ 1037
Query: 538 STYRNMWHRYCKGDVP 553
++ R MW R+C+G P
Sbjct: 1038 NSLRIMWQRWCEGLPP 1053
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 56/129 (43%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG M + D AI Y+ P AE NLG +D A+ Y+ L +
Sbjct: 269 FNLGNTLKAMQRNDDAIASYKATLALLPGDAEVYLNLGNAQQDLKQWQDAIVSYRAVLQL 328
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+ S NL G + A +AI A P A YNNL + G +S AI
Sbjct: 329 APHTSAVHANLASALHEAGDFEGAEASYRRAIEATPGEAVLYNNLARALQSQGHVSDAIA 388
Query: 122 AYEQCLKID 130
AYEQ + ID
Sbjct: 389 AYEQAIAID 397
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ ++ PH AEA NLG+ + R ++AV Y AL P+F ++ NL V
Sbjct: 182 ALQAWQRTVELAPHDAEAYGNLGIACQARGMHEEAVASYTRALQRNPDFVEAYCNLAVTL 241
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+++ A + +A+A P YA+A+ NLG + AI +Y+ L + P
Sbjct: 242 QSLGQLEQAEQAYRRALALRPDYAKAHFNLGNTLKAMQRNDDAIASYKATLALLP 296
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+A + A+ Y A NP EA NL V + L++A + Y+ AL+++
Sbjct: 202 NLGIACQARGMHEEAVASYTRALQRNPDFVEAYCNLAVTLQSLGQLEQAEQAYRRALALR 261
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ NLG + D A + +A P AE Y NLG +D AI +
Sbjct: 262 PDYAKAHFNLGNTLKAMQRNDDAIASYKATLALLPGDAEVYLNLGNAQQDLKQWQDAIVS 321
Query: 123 YEQCLKIDPDS 133
Y L++ P +
Sbjct: 322 YRAVLQLAPHT 332
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A AI YE A + + +A +NLG++ N A+ Q A ++
Sbjct: 372 NLARALQSQGHVSDAIAAYEQAIAIDGNFVQALSNLGLLQCQEKNYASAIALCQRAQLLQ 431
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +Q+ L VVY + D+A ++AI P A AY LG Y +LA++A
Sbjct: 432 PGDAQACIQLAVVYGAAEEQDSALLYFQRAIDLAPGSALAYKQLGDYYNTIRRFALAVEA 491
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y + + D + N +A+ + +DD
Sbjct: 492 YTGATERELDDDDVYNNLGVALQKLKR-YDD 521
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E F+ A Y A P A NNL + + ++ A+ Y+ A++I
Sbjct: 338 NLASALHEAGDFEGAEASYRRAIEATPGEAVLYNNLARALQSQGHVSDAIAAYEQAIAID 397
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
NF Q+L+NLG++ + +A + ++A P A+A L V+Y A A+
Sbjct: 398 GNFVQALSNLGLLQCQEKNYASAIALCQRAQLLQPGDAQACIQLAVVYGAAEEQDSALLY 457
Query: 123 YEQCLKIDPDS 133
+++ + + P S
Sbjct: 458 FQRAIDLAPGS 468
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A ++ ++ AIV Y PH + NL + + + A Y+ A+
Sbjct: 304 NLGNAQQDLKQWQDAIVSYRAVLQLAPHTSAVHANLASALHEAGDFEGAEASYRRAIEAT 363
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
P + NNL QG + A E+AIA + + +A +NLG+L
Sbjct: 364 PGEAVLYNNLARALQSQGHVSDAIAAYEQAIAIDGNFVQALSNLGLL 410
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A++ +Q + + P+ +++ NLG+ +G + A +A+ NP + EAY NL V
Sbjct: 182 ALQAWQRTVELAPHDAEAYGNLGIACQARGMHEEAVASYTRALQRNPDFVEAYCNLAVTL 241
Query: 111 RDAGSISLAIDAYEQCLKIDPD 132
+ G + A AY + L + PD
Sbjct: 242 QSLGQLEQAEQAYRRALALRPD 263
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+ + + AI + A P A+AC L V+Y + D A+ +Q A+
Sbjct: 404 LSNLGLLQCQEKNYASAIALCQRAQLLQPGDAQACIQLAVVYGAAEEQDSALLYFQRAID 463
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + + LG Y + A E A + YNNLGV + A
Sbjct: 464 LAPGSALAYKQLGDYYNTIRRFALAVEAYTGATERELDDDDVYNNLGVALQKLKRYDDAN 523
Query: 121 DAYEQCLKIDPDSRNA 136
AY + L+I+P + +A
Sbjct: 524 AAYLRALEINPKNVSA 539
>gi|357058364|ref|ZP_09119218.1| hypothetical protein HMPREF9334_00935 [Selenomonas infelix ATCC
43532]
gi|355374217|gb|EHG21518.1| hypothetical protein HMPREF9334_00935 [Selenomonas infelix ATCC
43532]
Length = 573
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 186/476 (39%), Positives = 259/476 (54%), Gaps = 26/476 (5%)
Query: 89 IEKAIAA--NPTY-----AEAYNNLGVLYRDAGSISLAIDAYEQCLKID--PDSRNAG-Q 138
+E+ IAA N Y A AY+ LG G + A+DA+ + + P R A
Sbjct: 106 LERRIAAGDNIAYHTVFLASAYSLLGEALTLTGESAAAVDAFRASGRHETRPAQRAAEYS 165
Query: 139 NRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERP---LVIGYVSPDY 195
N L A NY+ EG L ++ D + + LY+ T + D R + +GY+SPD
Sbjct: 166 NALFAANYLPEG----LRSSYTDLARGYGALYADVTPLASRADAARGHDRIRVGYISPDL 221
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
TH V I L HD + V Y+ ++ DA + R WR+I G+ ++
Sbjct: 222 RTHPVGTLIRPLLALHDRTRFTVCCYANCME-DALSHGLR----AAADAWRNIQGMPAEE 276
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
VAA+VR D+IDILV+L GHT +N L ++A +PAPVQVT IGY NTTGLP IDY ++D
Sbjct: 277 VAALVRADEIDILVDLAGHTQHNCLPVLAHKPAPVQVTGIGYFNTTGLPAIDYMLSDVHV 336
Query: 316 DPPETKQ-KHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVL 374
DP T EE+IRLP CY PV P P +G +TFGSFNN +K+T +VL
Sbjct: 337 DPIGTADPSFTEEMIRLPHSHFCYVLPEGLPPVAPPPMEQSGSVTFGSFNNFSKVTDEVL 396
Query: 375 QVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQA 434
++W +L VP SRL++K K F R + G+ RV++ + DH+
Sbjct: 397 RLWKEVLDVVPRSRLLLKSKLFASAEGRELAAERFSRCGIPPERVEMRAF---SRDHLAE 453
Query: 435 YSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNED 494
Y MDI+LDTFPY G TTCE+L MGVP VT+ G+ H G SLLT L LIA
Sbjct: 454 YGDMDIALDTFPYTGGITTCEALAMGVPVVTLRGASHGARFGESLLTNANLAELIADTPA 513
Query: 495 EYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
+YVQ+A LAS LA+LR +LR +++ +P+ D + + +E+ Y +W R+ +
Sbjct: 514 DYVQIAATLASAPETLASLRTNLRTILAHAPLTDARTYVCDVEAAYAEIWERFVRA 569
>gi|218530987|ref|YP_002421803.1| hypothetical protein Mchl_3037 [Methylobacterium extorquens CM4]
gi|218523290|gb|ACK83875.1| TPR repeat-containing protein [Methylobacterium extorquens CM4]
Length = 717
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 280/536 (52%), Gaps = 12/536 (2%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ A + +A + P A ++LG + + AV + A+++ PN + + +NL
Sbjct: 180 RHQQAFDLFSIAIYREPENAGYFSSLGAVLIAMGDYTGAVSALERAVALNPNLAIAHSNL 239
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
VY AA +A+A + + A+NNLG + G + A+ ++++ L DP
Sbjct: 240 SGVYQRVSHHSAAVTHARRAVALDAGLSNAHNNLGCSLKSLGHLPEALASFDRALATDPT 299
Query: 133 SRNAGQNRLLAMNYINEG--HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGY 190
A NRL Y EG H D +A R +G RF + + N +DPER L IG+
Sbjct: 300 HITAHSNRLFTKLYA-EGVPHTDYAADA-RSFGARFADPLLRRRPFPNDRDPERRLRIGF 357
Query: 191 VSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYG 250
VS D TH+V+ FIE L + D ++ Y DA + R R + G W +I G
Sbjct: 358 VSGDLCTHAVARFIEPFLRHLDRTQFEARAYMTQAAEDAVSARLR--TLFDG--WHNITG 413
Query: 251 IDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRI 310
+D+ + A ++ +KIDILV+L+GH+A ++L + A +PAPVQVTW+G+P TTGL +DYR+
Sbjct: 414 LDDDEAADLIESEKIDILVDLSGHSAGHRLLVFARKPAPVQVTWMGHPATTGLRAMDYRL 473
Query: 311 TDSLAD-PPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT-NGFITFGSFNNLAK 368
TD+ D P +T+ H E + LP Y + PV P NGF+TFG N K
Sbjct: 474 TDARLDVPGQTESLHTETVWWLPGVSATYEAHHDIPPVRERPPFEDNGFVTFGVMNRFEK 533
Query: 369 ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLN 428
I+ + WA IL A+P++RL + +R + + L G+ RV L P +
Sbjct: 534 ISDGAFKTWAAILEALPDARLFMVVADVETAVIREQVNARLSMAGIPLDRVRLHPRVTTT 593
Query: 429 HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL 488
+ Y DI+LD+FPY G TT+C++L MGVP + + GS VG SLL +GL+ L
Sbjct: 594 Y--FDLYHEFDIALDSFPYNGGTTSCDTLCMGVPFIALRGSQAVSRVGSSLLEAIGLEEL 651
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
+ ++Y AL+LA D L +R +LR+ M PV D FA + +R+MW
Sbjct: 652 VGDTPEDYATRALELARDPDRLRAIRTNLRERMFAGPVMDHARFAQDMGDAFRSMW 707
>gi|302878329|ref|YP_003846893.1| hypothetical protein Galf_1101 [Gallionella capsiferriformans ES-2]
gi|302581118|gb|ADL55129.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 1646
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 183/533 (34%), Positives = 288/533 (54%), Gaps = 16/533 (3%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P AEA NNLG++ + +A Y A+ I+P+++++ +NLG+ G
Sbjct: 427 YREAIRLKPDFAEAHNNLGIVLRALGRPAEAEASYLEAIRIQPDYAEAHSNLGITLHELG 486
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+ A I +A+ +P AEA+ NLG + G + A +Y + L+ DPD A N
Sbjct: 487 RSSDAVRSINQALLISPMLAEAHCNLGNVLLGLGRQAEAQASYRRALQCDPDFAEAHSNL 546
Query: 141 LLAMNYINEGHDDKLFEAHR-DWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHS 199
+ M+ + G D + + R +W Q ++ N +DP++ L IGYVS D+ HS
Sbjct: 547 IFTMD-LAVGSDTAMQQQERKNWHAAHAAHLYQQRNFSNARDPDKRLRIGYVSADFRVHS 605
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
+Y A L ++++V YS + DA T RF++ V +WR I G+ ++ V M
Sbjct: 606 AAYAFGAMLTKFSPDDFEIVAYSNSNREDAMTQRFQQHVT----LWRKIIGMSDQAVVDM 661
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE 319
+ D IDILV+L+GH++ N+L + A +PAP+Q+T GY + TGL +D +D++ PPE
Sbjct: 662 ILADGIDILVDLSGHSSGNRLLVFARKPAPIQITAWGYASGTGLRAMDVFFSDTVFVPPE 721
Query: 320 TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
+ E++ LP C + Y A V PAL+ +TFGS+N LAK + + WA+
Sbjct: 722 ETHLYAEQVRYLP-CAISYFAPDIAPDVSCLPALSGHGVTFGSYNRLAKNSEAAYRAWAK 780
Query: 380 ILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLN---HD-HMQAY 435
IL AVP+SR++ K +V+ + + G+ + R+ ILL HD HM A+
Sbjct: 781 ILRAVPDSRMIFKTPVLDDAAVQDQVRAYFTSAGVAAERI-----ILLGKSPHDEHMAAF 835
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+ +DISLD FP+ G + E L MGVP VT+ A + S++T + + IA +E+E
Sbjct: 836 NQIDISLDPFPHGGGVSALEGLLMGVPVVTLNWPSLAGRISASIMTTLAMPDWIAGSEEE 895
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
YVQLA+Q A+D+ +L+ LR LR S + D + +E YR +W +C
Sbjct: 896 YVQLAIQKATDIPSLSVLRGQLRGRFMTSVIGDQTAYVRYVEREYRQLWREWC 948
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 280/546 (51%), Gaps = 6/546 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + A Y+ A P +A NNL + K L +A + AL I
Sbjct: 1094 NLGNTLHALGRLSDAEDSYQRAIRIKPDFPDAYNNLSITLKGLGRLVEAEGACRRALQIN 1153
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+++ +NLG + Q ++D A I++A++ N T EA+ NL ++G A +
Sbjct: 1154 PGFAEAFSNLGFILKEQWRLDEAEASIQQALSINSTCVEAHCNLAATLLESGKSVEAEAS 1213
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
+ L++ PD N + ++ + L + R W Y N P
Sbjct: 1214 LRRALQLRPDDATLHSNLIFTLDLMTGESTASLQKERRLWNDVHAAHLPSYKLHRNLPSP 1273
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
ER L IGYVS D+ HS +Y A L+ D + ++V+ YS D T F++ V
Sbjct: 1274 ERRLRIGYVSADFRMHSAAYAFTAMLLDFDREQFEVIAYSNSKIEDKLTETFKKSVT--- 1330
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+WRDI G+ + +V ++R++ +DILV+L+GHTA N+L + A +PAP+Q+T GY TG
Sbjct: 1331 -LWRDIVGLPDDEVDDLIRQEGVDILVDLSGHTAGNRLLVFARKPAPIQITAFGYAAGTG 1389
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+ +D D + P + + E + LP C + S + C PAL+ G ITFGS
Sbjct: 1390 MDAMDVLFADEIFVPRDEVPVYAERVRYLP-CAVSMFISADVPDPCALPALSGGGITFGS 1448
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN L KI+ + WA+IL A+P+SRL++K R R + G++ R+ LL
Sbjct: 1449 FNRLVKISEQTYLAWAKILRALPDSRLILKTHALDDAGTRERVSEHFIRAGIDPARIILL 1508
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ A++ +DI+LDTFP+ G TT E L MGVP VT+ V S+LT
Sbjct: 1509 GKT-SREAQLAAFNRVDIALDTFPHGGGMTTLEGLVMGVPVVTLRWPTLTGRVSASILTT 1567
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+G+ IA+++DEYV+LA+Q A+D+ +L+ LR LR S + + + +E YR
Sbjct: 1568 LGMPDWIAESQDEYVKLAIQKAADLQSLSVLRGQLRGRFMSSVIGNQAAYVRCVEREYRL 1627
Query: 543 MWHRYC 548
+W +C
Sbjct: 1628 LWREWC 1633
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV E + D A Y A N A+A NLGV+ ++ +A CY+ A+ I
Sbjct: 204 YNLGVVLQEAGRLDEAEQSYRRAVALNAAYADAHCNLGVVLQELGRASEAEACYRRAIQI 263
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P ++ + +NL ++ A + +A+ NP A+A++ LG ++ G ++ A
Sbjct: 264 NPRYAAAYSNLANTLMASAELAEAEKCCRRALEINPGAADAHSTLGHIFEKQGDLAAAEA 323
Query: 122 AYEQCLKIDPDS 133
++ + L+I+PDS
Sbjct: 324 SFRRALQINPDS 335
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG + D A + Y A F P A+A NL + K++ D+A Y+ AL
Sbjct: 339 LSHLGSVLKAQGRLDEADICYRRALQFKPDYADAHYNLATLLKEQGRPDEAENSYRQALR 398
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P+F + N+ V Q ++ A +AI P +AEA+NNLG++ R G + A
Sbjct: 399 FNPDFVYAYYNVANVLLSQSRLTEAESGYREAIRLKPDFAEAHNNLGIVLRALGRPAEAE 458
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
+Y + ++I PD A N + ++ + D
Sbjct: 459 ASYLEAIRIQPDYAEAHSNLGITLHELGRSSD 490
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A NP A+A + LG I++ + +L A ++ AL I P+ + L++LG V QG++D
Sbjct: 294 ALEINPGAADAHSTLGHIFEKQGDLAAAEASFRRALQINPDSAADLSHLGSVLKAQGRLD 353
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A +A+ P YA+A+ NL L ++ G A ++Y Q L+ +PD
Sbjct: 354 EADICYRRALQFKPDYADAHYNLATLLKEQGRPDEAENSYRQALRFNPD 402
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
+ A NP A ++LG + K + LD+A CY+ AL KP+++ + NL + QG
Sbjct: 325 FRRALQINPDSAADLSHLGSVLKAQGRLDEADICYRRALQFKPDYADAHYNLATLLKEQG 384
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ D A +A+ NP + AY N+ + ++ A Y + +++ PD A N
Sbjct: 385 RPDEAENSYRQALRFNPDFVYAYYNVANVLLSQSRLTEAESGYREAIRLKPDFAEAHNN 443
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG A ++ + + A+ + + +P E NLGV+ ++ LD+A + Y+ A+++
Sbjct: 172 LGAALKQLGRTEEALAAMQRSVELSPDDVEVNYNLGVVLQEAGRLDEAEQSYRRAVALNA 231
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
++ + NLGVV G+ A +AI NP YA AY+NL + ++ A
Sbjct: 232 AYADAHCNLGVVLQELGRASEAEACYRRAIQINPRYAAAYSNLANTLMASAELAEAEKCC 291
Query: 124 EQCLKIDPDSRNA 136
+ L+I+P + +A
Sbjct: 292 RRALEINPGAADA 304
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A A NNLG+ D L +A ++ AL++ P+F+++ NLG G++ A +
Sbjct: 1052 PDDAAAINNLGLALHDVGRLLEAEATFRRALAMNPDFAEAYGNLGNTLHALGRLSDAEDS 1111
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
++AI P + +AYNNL + + G + A A + L+I+P A N
Sbjct: 1112 YQRAIRIKPDFPDAYNNLSITLKGLGRLVEAEGACRRALQINPGFAEAFSN 1162
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98
G I + R A+ Q A + P+ + ++NNLG+ G++ A +A+A NP
Sbjct: 1028 GAILRQRGQSIDALAAMQKAAVLLPDDAAAINNLGLALHDVGRLLEAEATFRRALAMNPD 1087
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+AEAY NLG G +S A D+Y++ ++I PD +A N
Sbjct: 1088 FAEAYGNLGNTLHALGRLSDAEDSYQRAIRIKPDFPDAYNN 1128
>gi|196232460|ref|ZP_03131313.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223532|gb|EDY18049.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 792
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 282/551 (51%), Gaps = 16/551 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
LG A + +FD A + L NP EA +L + + + LD A+ CY+ AL +
Sbjct: 246 GLGEALVLLGRFDEAGEVFRLIVRCNPDDPEAWASLANVLQRGEKLDDAIACYRQALRLD 305
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P L L + Q ++D AA + + + P EA L +Y+D G LA++
Sbjct: 306 PEEPFRLCRLAALLQRQRRLDDAAAALLQVLELQPNQTEALYRLAEIYKDQGRSELALEL 365
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTS-WDNTKD 181
+ + P+ + +L M E + + R W +RF ++ + + ++
Sbjct: 366 MRRLHGLAPEVPRIHSDLILMMLASPEVDERAVRAEGRRWDERFGHPIETFSGPYPHERN 425
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
PER L IGYVS D+ H V + D ++++ YS V D T FR
Sbjct: 426 PERKLRIGYVSADFKDHVVGRNLLPLFRQQDRTRHEILCYSGVASPDHVTEEFR----AH 481
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+WR+ + + ++++A V +D++DILV+L+ HTA N+L M A +PAPVQV++ GYP +T
Sbjct: 482 ADVWREAFRMSDEELAEAVGKDRVDILVDLSLHTAGNRLMMFARRPAPVQVSFAGYPGST 541
Query: 302 GLPTIDYRITDSLADPPETKQKHVEEL-IRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
GL + YRI+D + +E + L + F CY P V P+PA NGF+TF
Sbjct: 542 GLEAMGYRISDRYLEVERAGGSPMEAGDVALIDSFWCYDPCGVKLAVSPSPARENGFVTF 601
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
S N+ KI V Q WA +L SRL++ P R ++ L + G+E RV+
Sbjct: 602 ASLNDFGKINRAVFQRWAAVLRKATGSRLLLLTYP---GEHRRDTIALLREEGIEENRVE 658
Query: 421 LL---PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
L P ++++ Y D LD FPY G TT+ ++L+MGVP V++AG G+
Sbjct: 659 FLEPRP----RAEYLRYYHRADAMLDPFPYNGHTTSLDALWMGVPVVSLAGERMVSRAGL 714
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +GL L+A+ EDEYV++A +LA D+ LA LR +LR M S + D FA +E
Sbjct: 715 SQLTNLGLPELVARTEDEYVEIATRLAGDLPRLAELRATLRSRMEVSVLMDAPRFARQIE 774
Query: 538 STYRNMWHRYC 548
+ YR MW +C
Sbjct: 775 TAYRTMWRDWC 785
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG E+ + + A+ Y A P A A NNLG I ++ LD+A+ Y+ A+ +
Sbjct: 109 YNLGAVLAELGQMEEALASYRRALEIQPTHAVAENNLGNILRELRRLDEAIAAYRRAIQL 168
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P ++ + NNLGV + QGK D A +A+ P + NLG R +G + A+
Sbjct: 169 QPAYADAHNNLGVALSEQGKSDEAIAAYGRALELKPDGNAVHANLGNALRASGRYAEAVV 228
Query: 122 AYEQCLKIDP 131
AY + L+ P
Sbjct: 229 AYRRSLQSSP 238
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A + A P A+A NLG + + +++A+ Y+ AL I+P + + NNLG +
Sbjct: 90 AAEYARRAVEVAPGFADAHYNLGAVLAELGQMEEALASYRRALEIQPTHAVAENNLGNIL 149
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
++D A +AI P YA+A+NNLGV + G AI AY + L++ PD
Sbjct: 150 RELRRLDEAIAAYRRAIQLQPAYADAHNNLGVALSEQGKSDEAIAAYGRALELKPDG 206
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG ++ + +MAI F A +P+ A A +NL +A E + A+
Sbjct: 40 LHLLGALAQQVGRTEMAIEFMRQAIAADPNHAAALSNLAATLLAGGRAGEAAEYARRAVE 99
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P F+ + NLG V G+M+ A +A+ PT+A A NNLG + R+ + AI
Sbjct: 100 VAPGFADAHYNLGAVLAELGQMEEALASYRRALEIQPTHAVAENNLGNILRELRRLDEAI 159
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH 159
AY + +++ P +A N +A++ +G D+ A+
Sbjct: 160 AAYRRAIQLQPAYADAHNNLGVALS--EQGKSDEAIAAY 196
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 34/164 (20%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E+ + D AI Y A P A+A NNLGV ++ D+A+ Y AL +K
Sbjct: 144 NLGNILRELRRLDEAIAAYRRAIQLQPAYADAHNNLGVALSEQGKSDEAIAAYGRALELK 203
Query: 63 PN------------------------FSQSLNN----------LGVVYTVQGKMDAAAEM 88
P+ + +SL + LG + G+ D A E+
Sbjct: 204 PDGNAVHANLGNALRASGRYAEAVVAYRRSLQSSPARLDICQGLGEALVLLGRFDEAGEV 263
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+ NP EA+ +L + + + AI Y Q L++DP+
Sbjct: 264 FRLIVRCNPDDPEAWASLANVLQRGEKLDDAIACYRQALRLDPE 307
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
Y P AE + LG + + + A+E + A++ PN + +L+NL
Sbjct: 25 LYRQILAVQPGHAETLHLLGALAQQVGRTEMAIEFMRQAIAADPNHAAALSNLAATLLAG 84
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+ AAE +A+ P +A+A+ NLG + + G + A+ +Y + L+I P
Sbjct: 85 GRAGEAAEYARRAVEVAPGFADAHYNLGAVLAELGQMEEALASYRRALEIQP 136
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
L +A Y+ L+++P +++L+ LG + G+ + A E + +AIAA+P +A A +NL
Sbjct: 18 RLVEAESLYRQILAVQPGHAETLHLLGALAQQVGRTEMAIEFMRQAIAADPNHAAALSNL 77
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
G A + + +++ P +A N
Sbjct: 78 AATLLAGGRAGEAAEYARRAVEVAPGFADAHYN 110
>gi|390569444|ref|ZP_10249729.1| TPR repeat-containing protein [Burkholderia terrae BS001]
gi|389938304|gb|EIN00148.1| TPR repeat-containing protein [Burkholderia terrae BS001]
Length = 790
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 277/537 (51%), Gaps = 6/537 (1%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
++D A + A P A +LG Y+ D LD A+ CY+ A + P + + L
Sbjct: 256 RWDEAAQAFTSAVELAPSDASGYLDLGDTYEQGDKLDAAILCYRTATELAPRDGHAHHRL 315
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
V Q + D A ++KA+A P A + NLG + G AI +Y + + +D +
Sbjct: 316 AVALLKQRRADEALVSVQKAVALEPHSAVPHVNLGDVLSVLGDAEGAIASYRRGIALDGE 375
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVS 192
A L + A R++G R ++ ++ R L IG+VS
Sbjct: 376 MELAHNRLLFDLATHAPTPPSVTLAAAREFGARMA-ARARRCEHPTPRNDGRKLRIGFVS 434
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D H V FIE+ + + ++ ++ YS K D T R +++ WR + +
Sbjct: 435 GDLQLHPVGIFIESVMEHFADGSFDLIAYSTRAKEDDITARLKQRFTA----WRSLVNVP 490
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD 312
+ + M+R+D+IDILV+L+GHT +N+L + A +PAPVQV+W+GY TTGL IDY + D
Sbjct: 491 DDQAVRMIRDDRIDILVDLSGHTVHNRLPVFAWKPAPVQVSWLGYFGTTGLTEIDYVLGD 550
Query: 313 SLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPK 372
P + +VE+ RLP+ +LC+TP + V P P NG +TFG F L KITP
Sbjct: 551 PHVLPADEASHYVEKTWRLPDSYLCFTPPKDDVTVGPLPMTLNGHVTFGYFGKLVKITPN 610
Query: 373 VLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
V+ W+RIL AVP ++L++K + R L G+++ R+ +L H+++
Sbjct: 611 VIVEWSRILHAVPGAKLMMKSHELGAEHARRSTLKQFAGQGIDASRL-ILEGGSPRHEYL 669
Query: 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKN 492
+Y+ +DI L FPY G TTT E+L+MG P V + G ++ S+L GL IA++
Sbjct: 670 ASYNRVDIMLSPFPYPGGTTTAEALWMGTPVVALKGDRFVTHICESVLNAAGLAEWIARD 729
Query: 493 EDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
EDEY+ LA A+ LA LR LR SP+CD + FA L++ + MW +Y +
Sbjct: 730 EDEYLALAGAWATQSERLAALRAGLRAQTLASPLCDARRFAKNLKAAFEGMWAQYTE 786
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D I + NP+ A NNLG + R L +A+E Y+ A++++P+++++ NNL
Sbjct: 53 RADAGIALMHASIAANPN-AVYYNNLGNVLLGRRQLGEAIEGYRHAVTLRPDYAEAHNNL 111
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G G +A+ +AI P+YAEAYNNLG +D G + A+ AY + + PD
Sbjct: 112 GNALRAAGDANASMLSCARAIELRPSYAEAYNNLGNALKDLGDLDNAVLAYGKAVSFRPD 171
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+A N LA G+ D+ A R
Sbjct: 172 YADAFSN--LARAQAGRGNADESIAAFR 197
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + +++ A P AEA NNLG KD +LD AV Y A+S +
Sbjct: 110 NLGNALRAAGDANASMLSCARAIELRPSYAEAYNNLGNALKDLGDLDNAVLAYGKAVSFR 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + +NL +G D + +AIA +P +++++L L +G + AI
Sbjct: 170 PDYADAFSNLARAQAGRGNADESIAAFRRAIALDPNRVDSHDSLATLLHASGDVDAAIAV 229
Query: 123 YEQCLKIDPDSRNAGQNRLLA 143
++ ++DP + ++R LA
Sbjct: 230 LQRAAQLDP--ADGARHRKLA 248
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + AI Y A P AEA NNLG + + + ++ A+ ++
Sbjct: 76 NLGNVLLGRRQLGEAIEGYRHAVTLRPDYAEAHNNLGNALRAAGDANASMLSCARAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ NNLG G +D A KA++ P YA+A++NL G+ +I A
Sbjct: 136 PSYAEAYNNLGNALKDLGDLDNAVLAYGKAVSFRPDYADAFSNLARAQAGRGNADESIAA 195
Query: 123 YEQCLKIDPD 132
+ + + +DP+
Sbjct: 196 FRRAIALDPN 205
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A ++ D A++ Y A F P A+A +NL R N D+++ ++ A+++
Sbjct: 144 NLGNALKDLGDLDNAVLAYGKAVSFRPDYADAFSNLARAQAGRGNADESIAAFRRAIALD 203
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN S ++L + G +DAA ++++A +P + L R A A
Sbjct: 204 PNRVDSHDSLATLLHASGDVDAAIAVLQRAAQLDPADGARHRKLAQWLRGRERWDEAAQA 263
Query: 123 YEQCLKIDP 131
+ +++ P
Sbjct: 264 FTSAVELAP 272
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG Y + K D AI+ Y A P A + L V + D+A+ Q A++++
Sbjct: 280 DLGDTYEQGDKLDAAILCYRTATELAPRDGHAHHRLAVALLKQRRADEALVSVQKAVALE 339
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
P+ + NLG V +V G + A + IA + A+N L
Sbjct: 340 PHSAVPHVNLGDVLSVLGDAEGAIASYRRGIALDGEMELAHNRL 383
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N + + L A Y L +P S +L+ G++ + DA ++ +IAAN
Sbjct: 9 NAALAHHQAGRLADAQALYDAILQSEPAQSDALHFSGLLACQTNRADAGIALMHASIAAN 68
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
P A YNNLG + + AI+ Y + + PD A N
Sbjct: 69 PN-AVYYNNLGNVLLGRRQLGEAIEGYRHAVTLRPDYAEAHNN 110
>gi|240139559|ref|YP_002964035.1| hypothetical protein MexAM1_META1p3010 [Methylobacterium extorquens
AM1]
gi|418058199|ref|ZP_12696177.1| Tetratricopeptide TPR_2 repeat-containing protein [Methylobacterium
extorquens DSM 13060]
gi|240009532|gb|ACS40758.1| Conserved protein, TPR repeat containing [Methylobacterium
extorquens AM1]
gi|373568216|gb|EHP94167.1| Tetratricopeptide TPR_2 repeat-containing protein [Methylobacterium
extorquens DSM 13060]
Length = 717
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 281/536 (52%), Gaps = 12/536 (2%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ A + +A + P A ++LG + + A+ + A+++ P+ + + +NL
Sbjct: 180 RHQQAFDLFSIAIYREPDNAGYFSSLGAVLIAMGDYTGAISALERAVALNPDLAIAHSNL 239
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
VY AA +A+A +P + A+NNLG + G + A+ ++++ L DP
Sbjct: 240 SGVYQRVSHHSAAVTHARRAVALDPGLSNAHNNLGCSLKSLGHLPEALASFDRALATDPT 299
Query: 133 SRNAGQNRLLAMNYINEG--HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGY 190
A NRL Y EG H D +A R +G RF + + N +DPER L IG+
Sbjct: 300 HITAHSNRLFTKLYA-EGVPHADYAADA-RSFGARFADPLLRKRPFANDRDPERRLRIGF 357
Query: 191 VSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYG 250
VS D TH+V+ FIE L + D ++ Y DA + R R + G W +I G
Sbjct: 358 VSGDLCTHAVARFIEPFLRHLDRTRFEARAYMTQAAEDAVSARLR--TLFDG--WHNITG 413
Query: 251 IDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRI 310
+++ + A ++ +KIDILV+L+GH+A ++L + A +PAPVQVTW+G+P TTGL +DYR+
Sbjct: 414 LNDDEAADLIESEKIDILVDLSGHSAGHRLLVFARKPAPVQVTWMGHPATTGLRAMDYRL 473
Query: 311 TDSLAD-PPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT-NGFITFGSFNNLAK 368
TD+ D P +T+ H E + LP Y + PV P NGF+TFG N K
Sbjct: 474 TDARLDVPGQTESLHTETVWWLPGVSATYEAHHDIPPVRERPPFEDNGFVTFGVMNRFEK 533
Query: 369 ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLN 428
I+ + WA IL A+P++RL + +R + + L G+ RV L P +
Sbjct: 534 ISDGAFKTWAAILQALPDARLFMVVADVETAVIREKVNARLSMAGIPLDRVRLHPRVTTT 593
Query: 429 HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL 488
+ Y DI+LD+FPY G TT+C++L MGVP + + GS VG SLL +GL+ L
Sbjct: 594 Y--FDLYHEFDIALDSFPYNGGTTSCDTLCMGVPFIALRGSQAVSRVGSSLLEAIGLEEL 651
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
+ ++Y AL+LA D L +R +LR+ M PV D FA + +R+MW
Sbjct: 652 VGDTPEDYATRALELARDPDRLRAIRTNLRERMFAGPVMDHARFAQDMGDAFRSMW 707
>gi|395762114|ref|ZP_10442783.1| hypothetical protein JPAM2_10234 [Janthinobacterium lividum PAMC
25724]
Length = 892
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 301/606 (49%), Gaps = 52/606 (8%)
Query: 10 EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL 69
E + + AI Y+ A P +A NNLG+ ++ L+ A+ ++ + P+ +
Sbjct: 300 ETRRKEPAIAIYQAALLLEPGNIDALNNLGIALQEDGQLEAALASFRQVALLAPDNPVTH 359
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+N+ V G+ +AA E +A+ P A+ NLG + G +S A++++E +K+
Sbjct: 360 SNIAAVLNAMGQREAALESCRRAVKLGPKSTAAHVNLGTCLMEMGRLSDAVNSFETVVKL 419
Query: 130 DPDSRNAGQNRLLAMNYINE-----------------------------GHDDK-----L 155
DP R A N A+ + H +K L
Sbjct: 420 DPHHRRAYVNLSAALTRLGRIDQAIEHCRKALKINPDWDELHSNLLFYLTHSEKIDASAL 479
Query: 156 FEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY-HDY 213
F H +G +F L + + N +DPER L IG+VS D + H+V++FI L Y
Sbjct: 480 FAEHLRYGAQFEAPLRASWPQHGNVRDPERRLRIGFVSADLYNHAVAHFITPILEYLSQS 539
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ ++V Y+ D + +WR + + ++A ++ D IDIL++L+G
Sbjct: 540 RQVEIVAYANSFHDD----HISRHLHGLFALWRQVEKLSHAELAQLIASDAIDILIDLSG 595
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP-ETKQKHVEELIRLP 332
HT N+L A +PAP+QVTWIGYP TTGL IDY +TD PP E + E+L+RLP
Sbjct: 596 HTGFNRLPTFARKPAPLQVTWIGYPGTTGLQAIDYFLTDRYFSPPGELDDQFTEKLVRLP 655
Query: 333 ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
+ PSPEA + P P++ NG+ITFGSFN K++ V+ W+ +L VP +++++
Sbjct: 656 AT-APFLPSPEAPAISPAPSIENGYITFGSFNRAGKLSRDVIGRWSALLRMVPEAKMLLA 714
Query: 393 CKP--FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT 450
P D +R F S G+++ R+ + HD++ +S +D+ LDT+PY
Sbjct: 715 AIPDKQASDRLRSWFASE----GIDAGRL-MFHRYTNIHDYLALHSQVDLCLDTYPYTSG 769
Query: 451 TTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510
TT +L+MGVP +TM G V ++L+ L+ IA+ E++++ L ASD L
Sbjct: 770 TTGFHALWMGVPTLTMVGPTLPGYVSAAILSHARLQDFIARGEEDFLAKGLSYASDPGRL 829
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEEP 570
A LR+ +R+ M + GLE R+MW R+C G+ P+ E + + EP
Sbjct: 830 AGLRLEMRERMRNAASGRPDEITQGLEVALRHMWQRWCAGEKPA--SFEATSSGIAA-EP 886
Query: 571 SKFSEP 576
K +P
Sbjct: 887 QKEGQP 892
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG A+ + D+A+ ++ A P AEA + LG + + + +L +A +CY AL I
Sbjct: 89 HLGNAHMDGGHPDLAMPYFVRALELAPTYAEALSGLGDVLQAQGHLKEAGQCYGGALDID 148
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + G V Q + +A +A+A P A+ + LG ++ A+++
Sbjct: 149 PALAMAHRGKGDVLVAQQQFQSAQSSYRQALALEPGAADMHRKLGDVHVALNRPDAALES 208
Query: 123 YEQCLKIDP 131
Y L+ DP
Sbjct: 209 YAAALERDP 217
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P AEA +LG + D + D A+ + AL + P ++++L+ LG V QG + A +
Sbjct: 81 PDDAEAHLHLGNAHMDGGHPDLAMPYFVRALELAPTYAEALSGLGDVLQAQGHLKEAGQC 140
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
A+ +P A A+ G + A +Y Q L ++P +
Sbjct: 141 YGGALDIDPALAMAHRGKGDVLVAQQQFQSAQSSYRQALALEPGA 185
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 9 GEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQS 68
GE L+ + A A+ P A A LG+ + + A+ Q + + P+ +++
Sbjct: 32 GEQLQMEEATRAMADAY---PTSALAWRVLGMALRLQGK--DALSALQKTVELAPDDAEA 86
Query: 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128
+LG + G D A +A+ PTYAEA + LG + + G + A Y L
Sbjct: 87 HLHLGNAHMDGGHPDLAMPYFVRALELAPTYAEALSGLGDVLQAQGHLKEAGQCYGGALD 146
Query: 129 IDP 131
IDP
Sbjct: 147 IDP 149
>gi|254561974|ref|YP_003069069.1| hypothetical protein METDI3576 [Methylobacterium extorquens DM4]
gi|254269252|emb|CAX25218.1| Conserved protein, TPR repeat containing [Methylobacterium
extorquens DM4]
Length = 717
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 280/536 (52%), Gaps = 12/536 (2%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ A + +A + P A ++LG + + AV + A+++ PN + + +NL
Sbjct: 180 RHQQAFDLFSIAIYREPDNAGYFSSLGAVLIAMGDYTGAVSALERAVALNPNLAIAHSNL 239
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
VY AA +A+A +P + A+NNLG + G + A+ ++++ L DP
Sbjct: 240 SGVYQRVSHHSAAVTHARRAVALDPGLSNAHNNLGCSLKSLGQLPEALASFDRALATDPT 299
Query: 133 SRNAGQNRLLAMNYINEG--HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGY 190
A NRL Y EG H D +A R +G RF + + N +D +R L IG+
Sbjct: 300 HITAHSNRLFTKLYA-EGVPHADYAADA-RSFGARFADPLLRRRPFANDRDSDRRLRIGF 357
Query: 191 VSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYG 250
VS D TH+V+ FIE L + D ++ Y DA + R + + G W +I G
Sbjct: 358 VSGDLCTHAVARFIEPFLRHLDRTQFEARAYMTQAAEDAVSARL--QTLFDG--WHNITG 413
Query: 251 IDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRI 310
+D+ + A ++ +KIDILV+L+GH+A ++L + A +PAPVQVTW+G+P TTGL +DYR+
Sbjct: 414 LDDDEAADLIESEKIDILVDLSGHSAGHRLLVFARKPAPVQVTWMGHPATTGLRAMDYRL 473
Query: 311 TDSLAD-PPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT-NGFITFGSFNNLAK 368
TD+ D P +T+ H E + LP Y + PV P NGF+TFG N K
Sbjct: 474 TDARLDVPGQTESLHTETVWWLPGVSATYEAHHDIPPVRERPPFEDNGFVTFGVMNRFEK 533
Query: 369 ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLN 428
I+ + WA IL A+PN+RL + +R + + L G+ RV L P +
Sbjct: 534 ISDGAFKTWAAILQALPNARLFMVVADVETAVIREQVNARLSMAGIPLDRVRLHPRVTTT 593
Query: 429 HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL 488
+ Y DI+LD+FPY G TT+C++L MGVP + + GS VG SLL +GL+ L
Sbjct: 594 Y--FDLYHEFDIALDSFPYNGGTTSCDTLCMGVPFIALRGSQAVSRVGSSLLEAIGLEEL 651
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
+ ++Y AL+LA D L +R +LR+ M PV D FA + +R+MW
Sbjct: 652 VGDTPEDYAIRALELARDPDRLRAIRTNLRERMFAGPVMDHARFARDMGDAFRSMW 707
>gi|294924764|ref|XP_002778859.1| o-linked n-acetylglucosamine transferase, ogt, putative [Perkinsus
marinus ATCC 50983]
gi|239887676|gb|EER10654.1| o-linked n-acetylglucosamine transferase, ogt, putative [Perkinsus
marinus ATCC 50983]
Length = 490
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/453 (38%), Positives = 262/453 (57%), Gaps = 29/453 (6%)
Query: 48 LDKAVEC---YQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI--AANPTYAEA 102
LD +C + A+ + P+ + L+ LG +Y V G+ +EKA+ AEA
Sbjct: 45 LDDWADCKTAMEKAVDLDPSNKEYLHRLGAIYGVAGRD------LEKAVNLCKISGEAEA 98
Query: 103 YNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA--HR 160
+N G+ RD G AI ++E CLK +PD R+A +RL+++NY+ + D L+ A HR
Sbjct: 99 FNTAGIFLRDIGLTRSAIASFEDCLKAEPDHRHASHSRLMSLNYLPQ-RDGGLWVAKEHR 157
Query: 161 DWGKRFMRLYSQ-------YTSWDNTKDP--ERPLVIGYVSPDYFTHSVSYFIEAPLVYH 211
WG+ + ++ +++ + K+P + IGYVSPD HSVSYF++ H
Sbjct: 158 KWGESVVARVAEEVDRKTIFSADVSRKNPAGSGKIRIGYVSPDLRGHSVSYFVDGLFRCH 217
Query: 212 DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI-WRDIYGIDEKKVAAMVREDKIDILVE 270
D +V Y DA T R R + + W D++ +D++++A + ED ID+LV+
Sbjct: 218 DPAKVEVYAYHDSAVNDAVTRRLRGYIERHSEWKWVDVHDMDDRQLARQIWEDHIDVLVD 277
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK-QKHVEELI 329
L GH+ NN+L + A +PAP VT+IGYPNTTGLP +D+R+ D + DP E+ + E+L+
Sbjct: 278 LAGHSGNNRLLVFAVKPAPCTVTYIGYPNTTGLPNMDFRLVDEVTDPIESSGNGYSEQLV 337
Query: 330 RLPECFLCYTPSPEAGPVCPTPA---LTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
RLP CFLCY+P PE P C A T G TFGSFN LAK++ ++VWA+IL VPN
Sbjct: 338 RLPHCFLCYSP-PENVPECVLEAPQRRTGGTATFGSFNTLAKLSDDTVRVWAQILREVPN 396
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
SRL++K K R + G+ S R+DLL + H+ Y +D+ LD +P
Sbjct: 397 SRLMLKSKALASTVAVERLNRLFAEEGVPSTRLDLLGMTPSTSTHLGMYGEIDVCLDPWP 456
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
YAGTTT+ ++++MGVP VT+A +HA + G+ L
Sbjct: 457 YAGTTTSADAMFMGVPVVTLALKMHAIHKGLLL 489
>gi|390575516|ref|ZP_10255611.1| TPR repeat-containing protein [Burkholderia terrae BS001]
gi|389932565|gb|EIM94598.1| TPR repeat-containing protein [Burkholderia terrae BS001]
Length = 495
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 276/501 (55%), Gaps = 15/501 (2%)
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG--VLYRDA 113
+ AL + P+F+ +L+NL ++ V + D A + +AI A+ YNNLG +L +++
Sbjct: 3 RHALKLDPDFTHALHNLILLLHVCRRFDEAERLARRAIHEGARTADMYNNLGNILLAKNS 62
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQY 173
G I + +Y + ++ DPD A N + + ++ + + L E R + +RF Y +
Sbjct: 63 GDIDDGLWSYRRSIEADPDHIRAHSNLVYMLPFMCDDGYEILKECER-FSRRFETAYLVH 121
Query: 174 -TSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTI 232
+ N + R L IGYVSPD+ H S+F L HD+ +++ YS+V + D +
Sbjct: 122 DVQYHNERSTNRRLRIGYVSPDFRYHCQSFFTMPLLGNHDHSAFEIYCYSSVREHDNVS- 180
Query: 233 RFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
+ +WR++ +D+ ++A ++ ED+IDILV+LT H + + + A +PAPVQ+
Sbjct: 181 ---HHLSVHADVWRNVADLDDSQLATIIMEDRIDILVDLTMHMSGGRPLLFARRPAPVQI 237
Query: 293 TWIGYPNTTGLPTIDYRITDSLADPP---ETKQKHVEELIRLPECFLCYTPSPEAGPVCP 349
W+ YP TTG I YR+TD DPP + ++ E IRLP+ F CY P V P
Sbjct: 238 AWLAYPGTTGSAAIGYRLTDPWLDPPSVPDADSRYTERSIRLPDTFWCYDPLDTEPVVNP 297
Query: 350 TPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
PA G +TFG NN AK+T + + +WA ++ VP++R+++ R R +
Sbjct: 298 LPADEAGTVTFGCLNNPAKLTDRAIALWANVIANVPDARMILWVAE---GDARERVSAKF 354
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
E G++ R+ + + D+++ Y +D++LDTFP G TT+ ++L+MGVP VT GS
Sbjct: 355 EANGVDRSRLQFVDM-QAREDYLRTYHRIDVALDTFPCNGHTTSLDALWMGVPVVTRVGS 413
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
G +LL +GL L A++++ +V++A QLA D T L LR LR M SP+ G
Sbjct: 414 TPISRGGYALLANLGLPELAAESDEAFVKIATQLALDQTRLRTLRSGLRQRMELSPLMGG 473
Query: 530 QNFALGLESTYRNMWHRYCKG 550
FA G+E+ +R W +C+
Sbjct: 474 ARFARGVEAAFRQAWAEWCEA 494
>gi|254250927|ref|ZP_04944245.1| hypothetical protein BDAG_00091 [Burkholderia dolosa AUO158]
gi|124893536|gb|EAY67416.1| hypothetical protein BDAG_00091 [Burkholderia dolosa AUO158]
Length = 759
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 185/523 (35%), Positives = 274/523 (52%), Gaps = 21/523 (4%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
NLG + + + A EC+++AL +KP++ + NNLG + G AA + +AIA
Sbjct: 243 NLGNVMQAHNRPAAAAECFRLALELKPDYVDAYNNLGNAQRLAGNARAAVDAFCRAIALQ 302
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
P +AYNNLG D I A++AY+ + + P+ N L A +Y ++ +D
Sbjct: 303 PDNGQAYNNLGNALLDLNEIPAALEAYQHAVALRPELPEPRSNLLFAYHY-SDAYD---V 358
Query: 157 EAHRDWGKRFMRLYSQ----YTSW--DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
A+ D RF L +Q +++W D T RPL +G VS D +H V YFIE L +
Sbjct: 359 RAYLDEAARFDALVTQRARPWSTWHVDLTARIGRPLRVGIVSGDLKSHPVGYFIEGMLAH 418
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
D ++ Y D T R + + W + GI ++ AA +R+D+ID+L++
Sbjct: 419 LDRARIELYAYPTRDVEDDVTARIKPRC----AAWTSLAGIGDEAAAARIRDDRIDVLID 474
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
+GHT +N+L + A +PAP+QV+W GY +TG+ IDY + D PPE VE
Sbjct: 475 ASGHTIHNRLPLFAWKPAPLQVSWPGYFASTGMRAIDYVLGDRHVMPPEEASHFVERAWH 534
Query: 331 LPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
LP+ +LC+TP+ A P P L NG TFG F LAKIT +V+ VW+R+L VPN++L
Sbjct: 535 LPDSYLCFTPADVAIDGGPLPMLANGHPTFGYFGKLAKITDRVVAVWSRVLRDVPNAKLF 594
Query: 391 VKCKPFCCDSVRHRFLS---TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY 447
VK P D+ L+ +G E L+ + D++ AY +D+ L FPY
Sbjct: 595 VKA-PHLDDANEQTALAARFAAHGIGGERLQFEGRS---PRADYLAAYRRVDLMLSPFPY 650
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G TTT E+L+MGVP + G ++ SLL L IA ++D YV A+ A +
Sbjct: 651 PGGTTTAEALWMGVPVLGRRGERFLSHICESLLHAARLPDWIAADDDAYVAKAVAFAGNP 710
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
LA LR +LR + SP+CD + FA E MW R+ +
Sbjct: 711 AELAVLRTTLRAQVLASPLCDARRFARHFEDALHAMWARHVEA 753
>gi|293604978|ref|ZP_06687375.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553]
gi|292816806|gb|EFF75890.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553]
Length = 1140
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 272/504 (53%), Gaps = 15/504 (2%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+A+ + A+ + P +++ + L + + A E +AIA +P + +A NL
Sbjct: 645 EAIGAGRRAVELAPGSAETHSALADGLATERRYKEAEESNRRAIALDPMHRKARVNLSKT 704
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR- 168
DAG ++ AIDA + P + N L A+NY + ++++EA+RD+ + +
Sbjct: 705 LIDAGEVAAAIDAARDTVAAFPTEKMPRNNLLFALNYSDGHTAEQVYEAYRDYDRDLCQA 764
Query: 169 LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
L S + N++ P+R L +GYVSPD+ HS +YFIE +HD N+++ Y+ +V D
Sbjct: 765 LRSNWKPHKNSRQPQRKLKVGYVSPDFRQHSGNYFIEPLFAHHDRGNFELTAYAELVTPD 824
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
A + R R W + + ++A +R D IDIL+++ GHTA+N+LG A +PA
Sbjct: 825 ATSARLRTYFDH----WVPTATLTDAQLAERIRADGIDILIDVAGHTADNRLGTFARKPA 880
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
PV +TW+G+ TTGL IDY +TD+ P ++ E+ RLP+ Y P+ G
Sbjct: 881 PVSLTWLGFGYTTGLSAIDYIMTDAAMVPEGSEHLFSEKPWRLPQSNFIYRPAVTMGDFG 940
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
P PAL NG++T G+ ++ + ++VWA IL +P RLVV + + R ++
Sbjct: 941 PLPALRNGYVTLGTLTRAIRMNDRTVRVWAEILRRLPQGRLVVDSNSYRDGPTQERLIAR 1000
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSL---MDISLDTFPYAGTTTTCESLYMGVPCVT 465
E G++ R L+ H A+ + MDI LD FP+ T E+LYMGVP VT
Sbjct: 1001 FEAQGIDRSR-------LMIGCHSPAWDVLRNMDIGLDCFPHNSGVTLVETLYMGVPYVT 1053
Query: 466 MAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
+A +G S+L +G IA++E+EY+Q + LASD+ ALA++R +LR M SP
Sbjct: 1054 LADRPSVGRIGSSVLHGLGHPEWIAQSEEEYIQKVVALASDLPALADIRANLRAEMHASP 1113
Query: 526 VCDGQNFALGLESTYRNMWHRYCK 549
+ D FA E+ R M+ +C+
Sbjct: 1114 LMDEPAFARKFEAALRGMFQTWCE 1137
>gi|115524525|ref|YP_781436.1| hypothetical protein RPE_2518 [Rhodopseudomonas palustris BisA53]
gi|115518472|gb|ABJ06456.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris
BisA53]
Length = 676
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 192/587 (32%), Positives = 285/587 (48%), Gaps = 51/587 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGVA + + D A+ YE A +P +A NN G +D ++A+E Y AL+I+
Sbjct: 95 NLGVALYNLKRLDEALASYERALALDPTLVQAHNNRGNTLQDMKRSNEALESYDRALAIQ 154
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN----------------- 105
PN++++ NN G + DAA +KA+A P YAEA+NN
Sbjct: 155 PNYAEAHNNRGNALLSLQQFDAAIASYDKALALKPEYAEAFNNRGNALFQCNRHHEAIAS 214
Query: 106 -----------------LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+G G I AI ++ L I PD A ++ A +++
Sbjct: 215 CAKALSIDPNYFFAHSVIGQCLTALGHIDQAIAHFDAALAIKPDCDEAISAKIFAFDFV- 273
Query: 149 EGHDDKLFEAHRD-----WGKRFMRLYSQY--TSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ FE HRD W + ++ + + NT+DP R LV+GYVS D+ HS
Sbjct: 274 ---ENATFEQHRDVRRAWWNELGSKIAANQPPRQYRNTRDPNRRLVVGYVSSDFRRHSAG 330
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
++ L Y D + V YS D T FR + WR+ G + + A +R
Sbjct: 331 LAVKPVLQYSDRSQIETVCYSCFELEDDVTAEFRGLADR----WRNASGWSDARFADEIR 386
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GHT+ N+L + A +PAP+QV G+ GLPTIDY +D + P + +
Sbjct: 387 RDQIDILVDLSGHTSGNRLEVFARKPAPIQVHGWGHGTPPGLPTIDYVFSDPVTIPVDAR 446
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
+ E + LP C + P + P PALT G +T G FN + KI+ Q WA+IL
Sbjct: 447 RLFSEAIYDLP-CAMTLEPLRDEVPRGGLPALTTGHVTLGVFNRIGKISDASAQAWAQIL 505
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
VPN+R VVK R L+ +LG+ R+ L DH+ A + +DI
Sbjct: 506 HLVPNARFVVKHWGLDDALTRDNLLARFARLGVPPERIALRGTTS-RPDHLAALNGVDIC 564
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFP G +T E+L MGVP V + G+ + V ++LT VG+ IA + + YV +
Sbjct: 565 LDTFPQNGGVSTWEALQMGVPVVALIGATASSRVAAAILTAVGMTDWIADSPESYVATVV 624
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
S + L+ LR +L ++ S + +A + YRNMW YC
Sbjct: 625 TQGSKLNELSRLRRALPGRVAASVAGNPTAYAEQVSKAYRNMWQAYC 671
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGV F+ + P A NLGV + LD+A+ Y+ AL++ P
Sbjct: 62 LGVIAIHSKDFEHGVKLITKVIRALPQVAILHCNLGVALYNLKRLDEALASYERALALDP 121
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
Q+ NN G + + A E ++A+A P YAEA+NN G AI +Y
Sbjct: 122 TLVQAHNNRGNTLQDMKRSNEALESYDRALAIQPNYAEAHNNRGNALLSLQQFDAAIASY 181
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
++ L + P+ A NR A+ N H+
Sbjct: 182 DKALALKPEYAEAFNNRGNALFQCNRHHE 210
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ +A YE +P + LGVI + + V+ + P + NL
Sbjct: 37 QLALAKNLYEEILETHPKHLDTLQCLGVIAIHSKDFEHGVKLITKVIRALPQVAILHCNL 96
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
GV ++D A E+A+A +PT +A+NN G +D + A+++Y++ L I P+
Sbjct: 97 GVALYNLKRLDEALASYERALALDPTLVQAHNNRGNTLQDMKRSNEALESYDRALAIQPN 156
Query: 133 SRNAGQNR 140
A NR
Sbjct: 157 YAEAHNNR 164
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A Y+ L P +L LGV+ + ++I K I A P A + NLGV
Sbjct: 41 AKNLYEEILETHPKHLDTLQCLGVIAIHSKDFEHGVKLITKVIRALPQVAILHCNLGVAL 100
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQNR---LLAMNYINEG---HDDKL------FEA 158
+ + A+ +YE+ L +DP A NR L M NE +D L EA
Sbjct: 101 YNLKRLDEALASYERALALDPTLVQAHNNRGNTLQDMKRSNEALESYDRALAIQPNYAEA 160
Query: 159 HRDWGKRFMRL 169
H + G + L
Sbjct: 161 HNNRGNALLSL 171
>gi|196232370|ref|ZP_03131223.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223442|gb|EDY17959.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 779
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 294/555 (52%), Gaps = 16/555 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E F A +P A+A +NLGV + +A+ ++ AL ++
Sbjct: 229 NLGTTLIEQGLFTEGATACNHALALDPDFADAQSNLGVALAGLNRFAEAIAAFRSALQLQ 288
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + NLG V+ Q +D A + ++A+ P + EA NLG ++RD G ++ A+
Sbjct: 289 PDNATVHFNLGNVFRDQRNLDQAVDEYQRALTLEPMFMEAITNLGNVFRDCGKVNEALAI 348
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKD 181
Y + L + + N + + + +++++ E R W + + S +++ +D
Sbjct: 349 YRRGLSSNSSVTHLRSNIIYTSLFSPDWNEEQIREEQRLWNTQIAIPSPSTEPAYEANRD 408
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P R L + YVSPD+ H V + +HD + +++ YS D T R R+
Sbjct: 409 PSRRLRVAYVSPDFRGHVVGQNLLPLFRHHDPERFEIFCYSNSKMTDGMTARLRDHTSN- 467
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
W +I ++ +++M+R + +DILV+LT H N+L + +PAP+QV++ GYP +T
Sbjct: 468 ---WYNIADTGDEDLSSMIRGNNVDILVDLTQHMRGNRLRTFSQRPAPIQVSFAGYPEST 524
Query: 302 GLPTIDYRITDSLAD---PPETKQKHVE----ELIRLPECFLCYTPSPEAGPVCPTPALT 354
G+ I+YRI+D + P + V+ E + L + F CY P + A+
Sbjct: 525 GVRAINYRISDKWLEQGAAPNSDGLLVKTADYEHVYLIDSFWCYDPCGIELEANGSSAVN 584
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
+ITFGS NN K+ +L++WAR+L AV NSRL++ S R R Q G+
Sbjct: 585 TNWITFGSLNNFCKVNEPLLKLWARVLTAVNNSRLIILAHE---GSHRQRTSEFFTQEGV 641
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
E R++ + ++++ Y +DI LDTFPY G TT+ ++L+MGVP V++ G
Sbjct: 642 EPERIEFVTQ-RPRKEYLELYHRLDIVLDTFPYNGHTTSLDALWMGVPVVSLCGERPVSR 700
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
G+S L +GL L+A ED+YV++A +LA+D+ L LR +LR M KS + DG +FA
Sbjct: 701 AGLSQLNNLGLPELVAFTEDQYVEIATKLANDIPRLRELRATLRQRMEKSVLMDGPHFAR 760
Query: 535 GLESTYRNMWHRYCK 549
+E+ YR+MW ++C+
Sbjct: 761 QIEACYRSMWWQWCE 775
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN+G+ E K D AI Y A + P AEA NNLG R + + AV Y+ A+ I
Sbjct: 92 YNMGITMMECGKLDQAINAYACAIRYKPDFAEAHNNLGNAEARRGHFESAVAAYRRAIQI 151
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+PN++++ NNLG + G+ A AI+ P + EAY+NLG+ + + A
Sbjct: 152 RPNYAEAFNNLGTALSKAGQSAEAITAYLNAISLKPQFPEAYHNLGMALAEQRRLEEATQ 211
Query: 122 AYEQCLKIDPDS 133
AY + L+++ ++
Sbjct: 212 AYRRALELNSNA 223
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN G A K + A+ + A P AEA N+G+ + LD+A+ Y A+
Sbjct: 58 YNRGNALRSQGKLEEALAAFCKAIVLKPEYAEAYYNMGITMMECGKLDQAINAYACAIRY 117
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+F+++ NNLG +G ++A +AI P YAEA+NNLG AG + AI
Sbjct: 118 KPDFAEAHNNLGNAEARRGHFESAVAAYRRAIQIRPNYAEAFNNLGTALSKAGQSAEAIT 177
Query: 122 AYEQCLKIDPDSRNAGQNRLLAM 144
AY + + P A N +A+
Sbjct: 178 AYLNAISLKPQFPEAYHNLGMAL 200
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A F+ A+ Y A P+ AEA NNLG +A+ Y A+S+K
Sbjct: 127 NLGNAEARRGHFESAVAAYRRAIQIRPNYAEAFNNLGTALSKAGQSAEAITAYLNAISLK 186
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F ++ +NLG+ Q +++ A + +A+ N + +NNLG + G + A
Sbjct: 187 PQFPEAYHNLGMALAEQRRLEEATQAYRRALELNSNAPQPWNNLGTTLIEQGLFTEGATA 246
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYIN 148
L +DPD +A N +A+ +N
Sbjct: 247 CNHALALDPDFADAQSNLGVALAGLN 272
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + AI Y A P EA +NLG+ ++ L++A + Y+ AL +
Sbjct: 161 NLGTALSKAGQSAEAITAYLNAISLKPQFPEAYHNLGMALAEQRRLEEATQAYRRALELN 220
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q NNLG QG A A+A +P +A+A +NLGV + AI A
Sbjct: 221 SNAPQPWNNLGTTLIEQGLFTEGATACNHALALDPDFADAQSNLGVALAGLNRFAEAIAA 280
Query: 123 YEQCLKIDPDS 133
+ L++ PD+
Sbjct: 281 FRSALQLQPDN 291
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A NP A A +NLG + D+A+ Y A+ +KP+++++ N G QGK++
Sbjct: 12 AIALNPEDAAAYSNLGNSLAAQGRTDEAIAAYDHAILLKPDYTEAHYNRGNALRSQGKLE 71
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
A KAI P YAEAY N+G+ + G + AI+AY ++ PD A N L
Sbjct: 72 EALAAFCKAIVLKPEYAEAYYNMGITMMECGKLDQAINAYACAIRYKPDFAEAHNN--LG 129
Query: 144 MNYINEGHDDKLFEAHR 160
GH + A+R
Sbjct: 130 NAEARRGHFESAVAAYR 146
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + D AI Y+ A P EA N G + + L++A+ + A+ +K
Sbjct: 25 NLGNSLAAQGRTDEAIAAYDHAILLKPDYTEAHYNRGNALRSQGKLEEALAAFCKAIVLK 84
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ N+G+ GK+D A AI P +AEA+NNLG G A+ A
Sbjct: 85 PEYAEAYYNMGITMMECGKLDQAINAYACAIRYKPDFAEAHNNLGNAEARRGHFESAVAA 144
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I P+ A N
Sbjct: 145 YRRAIQIRPNYAEAFNN 161
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
E Q A+++ P + + +NLG QG+ D A + AI P Y EA+ N G R
Sbjct: 7 ELLQRAIALNPEDAAAYSNLGNSLAAQGRTDEAIAAYDHAILLKPDYTEAHYNRGNALRS 66
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
G + A+ A+ + + + P+ A N + M
Sbjct: 67 QGKLEEALAAFCKAIVLKPEYAEAYYNMGITM 98
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 83 DAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+ E++++AIA NP A AY+NLG G AI AY+ + + PD A NR
Sbjct: 3 ETGQELLQRAIALNPEDAAAYSNLGNSLAAQGRTDEAIAAYDHAILLKPDYTEAHYNR 60
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG + + D A+ Y+ A P EA NLG +++D +++A+ Y+ LS
Sbjct: 296 FNLGNVFRDQRNLDQAVDEYQRALTLEPMFMEAITNLGNVFRDCGKVNEALAIYRRGLSS 355
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
+ + +N ++YT D E I +
Sbjct: 356 NSSVTHLRSN--IIYTSLFSPDWNEEQIRE 383
>gi|378948679|ref|YP_005206167.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Pseudomonas fluorescens F113]
gi|359758693|gb|AEV60772.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Pseudomonas fluorescens F113]
Length = 1142
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 286/576 (49%), Gaps = 49/576 (8%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
+ A+V +E A P +A + + + D+A AL I P+FS + L
Sbjct: 57 ERALVSFERALSLLPDDPQALELVAKAAQKLGHADRAQALVLKALGIDPDFSAGHHRLST 116
Query: 75 VYTVQGKMDAAAEMIEKAIAANP-----------------TYAEA--------------- 102
+Y +G+ A + IE+A+ +P Y+EA
Sbjct: 117 LYFEKGQFANALQHIEQALDISPDDCRMQSRKGLILNRLERYSEAIAVFGKLIEREPGDY 176
Query: 103 --YNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG----QNRLLAMNYINEGHDDKLF 156
+NN LY+D G ++ A + Y++ + + +R NRL +++Y E D +F
Sbjct: 177 SHWNNAANLYKDIGQLAKADEFYQKAVSL---ARRKDVLPYSNRLTSLHYDPERSRDDIF 233
Query: 157 EAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNY 216
+ ++W RF + P R L IG VS H V I L +
Sbjct: 234 QVCKEWQSRFGPRSVPPRPEVLDRAPNRCLRIGLVSDGLRQHPVGNMIVGVLEKLPRHQF 293
Query: 217 KVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTA 276
++ YS +D T R R V + W I +DE +A +R+D IDIL++L GH A
Sbjct: 294 ELFAYSTSQVSDHLTRRIRTTVYQ----WLAIKHMDEPTLAQRIRDDGIDILIDLCGHNA 349
Query: 277 NNKLGMMACQPAPVQVTWIG-YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
N++G MA QPAP+ V W+G NTTGL IDY ++DS+ P + E+LIRLP+ +
Sbjct: 350 GNRMGAMALQPAPLLVKWVGGLINTTGLDAIDYLLSDSIESPEGEDAFYTEKLIRLPDDY 409
Query: 336 LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 395
+CY P P V P PAL NGFIT+G FNN K+ +L WA ++ A +SRL++K
Sbjct: 410 ICYDPPPYTPDVKPLPALENGFITYGCFNNPTKVNDVLLAQWAELMRATADSRLLLKGGA 469
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM-QAYSLMDISLDTFPYAGTTTTC 454
F +R + + G+ RV L + H H+ + Y+ +DI+LD +PY+G TTC
Sbjct: 470 FGNSELREHVQAFMAAQGIARERV--LVEGPVGHKHLLETYNRIDIALDPWPYSGGLTTC 527
Query: 455 ESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLR 514
E+L MGVP VT+ G A + L GL L+ + DEY Q + LA D+ +L+ +R
Sbjct: 528 EALLMGVPVVTLPGPTFAGRHSATHLVNAGLPELVVDSWDEYRQRVIGLAGDLKSLSRIR 587
Query: 515 MSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
LRD++ +SPVCD + FA + R +W RYC+G
Sbjct: 588 SHLRDVLMRSPVCDSRRFASHFSTAMRAIWQRYCEG 623
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 41 IYKDRDNLD------KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIA 94
++KD NL+ +A+ ++ ALS+ P+ Q+L + G D A ++ KA+
Sbjct: 43 VWKDLGNLELNVEPERALVSFERALSLLPDDPQALELVAKAAQKLGHADRAQALVLKALG 102
Query: 95 ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
+P ++ ++ L LY + G + A+ EQ L I PD + L +N + ++
Sbjct: 103 IDPDFSAGHHRLSTLYFEKGQFANALQHIEQALDISPDDCRMQSRKGLILNRL-----ER 157
Query: 155 LFEAHRDWGKRFMRLYSQYTSWDNTKD 181
EA +GK R Y+ W+N +
Sbjct: 158 YSEAIAVFGKLIEREPGDYSHWNNAAN 184
>gi|344345597|ref|ZP_08776441.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
gi|343802820|gb|EGV20742.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
Length = 772
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 286/551 (51%), Gaps = 10/551 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+YNL M + AI +++ +P ++ NN G + +A++ Y+ AL+
Sbjct: 228 LYNLASLLQAMGEAKEAIGYFDTVLEIDPQHLKSYNNRGSALRCLGRSAEALDDYRRALA 287
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P+ ++L NLG G++D A + ++A+ P AE NL + + G + A+
Sbjct: 288 IDPDHPETLTNLGNALAELGRLDEALALQQRAVTLRPGQAEMLANLANILQQMGRVDEAV 347
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNT 179
Y Q L P L A+NY ++ + +F +RD+ +R + + + + NT
Sbjct: 348 ATYRQALSQHPQDAAIHSKLLFALNYQSDLSAEAIFTDYRDYDRRHGEAVRAHWRAHTNT 407
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
+D ER L +GYVSPD+ +H++ Y +E L + + +++ VY+ + + DA+T R+R V
Sbjct: 408 RDAERRLRLGYVSPDFRSHAIRYMLEPLLEHRNRLQFELHVYAELTREDAQTARYRSLVD 467
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT-WIGYP 298
W G+ + ++AA +R D IDILV+L GHTA N+LG+ A +PAPV V+ W+GY
Sbjct: 468 H----WVPTRGLSDGELAARIRADGIDILVDLAGHTAGNRLGVFAYKPAPVSVSAWVGYG 523
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGL IDY + D + P ++ E RL Y PS G V PAL G +
Sbjct: 524 YTTGLSAIDYFLADEVLVPEGSEGLFSERPWRLAAPGGVYRPSAGMGAVNVLPALERGAV 583
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFG+ +I +V++VW+ IL VP SRLV+ + + SV R + G+ R
Sbjct: 584 TFGTLTRGVRINHRVVRVWSEILDRVPGSRLVIDSRTYADASVAERLAARFAAHGIARER 643
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
++ I + MDI LD FP+ TT ESLYMGVP VT+A +G +
Sbjct: 644 LE----IGYHSPPWDVLRGMDIGLDCFPHNSGTTLMESLYMGVPFVTLADRPSVGRIGAT 699
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
+L +G IA +E YV+ A+ LA+D+ LA +R LR M S D +E+
Sbjct: 700 ILAGIGRDAWIAPDEAGYVERAVALAADLAGLAAIRAGLRGEMEASAWRDEPGGIARIEA 759
Query: 539 TYRNMWHRYCK 549
YR MW R+C+
Sbjct: 760 AYRAMWRRWCE 770
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A+ E A + + N LGV + L +A Y A + PN +L NL
Sbjct: 172 RSDEALPALEEALGRDDQDPQIHNVLGVALEQAGRLREAGLAYAHAAKLSPNSVSALYNL 231
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+ G+ A + + +P + ++YNN G R G + A+D Y + L IDPD
Sbjct: 232 ASLLQAMGEAKEAIGYFDTVLEIDPQHLKSYNNRGSALRCLGRSAEALDDYRRALAIDPD 291
>gi|443646868|ref|ZP_21129546.1| methyltransferase, FkbM family domain protein [Microcystis
aeruginosa DIANCHI905]
gi|443335697|gb|ELS50161.1| methyltransferase, FkbM family domain protein [Microcystis
aeruginosa DIANCHI905]
Length = 1246
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 235/394 (59%), Gaps = 10/394 (2%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+ L IGYVSPD+ H V FI + +HD+Q +++ Y + K D T E++
Sbjct: 340 QHKLKIGYVSPDFKRHPVGKFIAPIIKHHDHQKFEIYCYGEIRKVDEIT----EEIQSSC 395
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WR +G+ + +V +++D+IDIL++L GHT +N+L + +PAP+Q +++GY TTG
Sbjct: 396 DHWRSTFGLADAEVIEQIKQDRIDILIDLAGHTDDNRLPIFFSKPAPIQASYLGYFATTG 455
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+PTIDY ITD P +T++K E + RLP C++ Y PSPEA V P PAL++ +ITFG
Sbjct: 456 IPTIDYWITDHHLHPVDTEEKTSETIWRLPRCYVAYQPSPEALEVNPLPALSSEYITFGC 515
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD--SVRHRFLSTLEQLGLESLRVD 420
NN +K+ P +L +WA+IL A+P SRL++K D + L++ GL +V+
Sbjct: 516 LNNFSKLNPFLLSLWAKILQALPQSRLILKSHYHNLDDPEEKQSVELFLQEQGLNLEQVE 575
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L+ L D+ Y +DI LDTFPY G TTTC++L+MGVP +T+AG +G SLL
Sbjct: 576 LIDSPTLAEDYFALYHRIDIHLDTFPYNGCTTTCDALWMGVPVLTLAGDRKIQRMGNSLL 635
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+GL IA + +EYV A+ A D+ A+A LR SLR+ KS + D + L LE+ Y
Sbjct: 636 QAIGLGDWIAHSPEEYVNKAITFAQDLEAIAQLRTSLRERFQKSQLGDIEGLTLALENAY 695
Query: 541 RNMWHRYCKGDVPSL----KRMEMLQQQVVSEEP 570
+ MW + + + L +++ ++ Q ++ P
Sbjct: 696 QQMWKKLEQEKIQPLESGDQQISAMRSQTETQSP 729
>gi|196234038|ref|ZP_03132873.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196221887|gb|EDY16422.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 733
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 281/553 (50%), Gaps = 15/553 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E +F A A P A A NLG + + LD+A+ ++ AL +
Sbjct: 184 NLGNALVEQREFSEATAVLRHALQLRPDSAIAHYNLGNALRAQGLLDEAMLAFRRALEMD 243
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ S++ +NLG + +G+ D A ++A+A+ YA A +LG +D G + A++A
Sbjct: 244 PHLSEAWHNLGNAFRDRGQFDEAIASYQQALASKCDYAAAIVSLGNACKDQGRLDEAMNA 303
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT-SWDNTKD 181
+ + L++ P+ N + ++ + + W +RF + Q + N +
Sbjct: 304 FRRALQLQPEDAGTHSNLVYSLEFHPASETGIITREQERWNERFAASWKQKVPAHANDRS 363
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
R L IGYVS D+ H + + L HD ++VV YS V AD T FR ++
Sbjct: 364 GTRRLRIGYVSSDFKDHVIGRNVLPLLQCHDRAGFEVVCYSGVETADELTAEFR----RQ 419
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
W + ++ +A +R D+IDILV+LT H A N+L A +PAPVQV++ GYP T+
Sbjct: 420 ADEWHATADVPDEALANAIRRDRIDILVDLTQHLAGNRLPAFAREPAPVQVSFAGYPQTS 479
Query: 302 GLPTIDYRITD------SLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN 355
G+ I YRI+D L + + E + L + F CY P PA
Sbjct: 480 GVAAIPYRISDRWLEKGGLENSEGMVKATAREQVFLIDSFWCYDPCGAGVQTNALPAENA 539
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
G ITFG NN K+ +L++WAR L AV NSRL++ S R LE G++
Sbjct: 540 GMITFGCLNNFCKVNDPLLKLWARGLKAVKNSRLILLSHE---GSQTQRTRQFLEGEGVD 596
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
++ + +++ Y +DI+LD FPY G +T+ ++L+MGVP V++ G
Sbjct: 597 PAHIEFVA-PRSRKPYLELYHRLDIALDPFPYNGHSTSLDALWMGVPVVSLCGDRPVSRA 655
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
G+S L+ +GL L+A +D YV +A LA+D+ L LR +LR M KS + D +F
Sbjct: 656 GLSQLSNLGLPELVASTKDRYVDIATGLANDIPRLKELRATLRQRMEKSVLMDASHFTRQ 715
Query: 536 LESTYRNMWHRYC 548
+E+ YR MW ++C
Sbjct: 716 IENCYRTMWRQWC 728
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ L + + + A Y P+ A A + LGV+ + A++ + A+++
Sbjct: 13 FALALQLHQAGRLAEAETLYRQILAVEPNHANALHFLGVVAHQVGQQETAIDLIRRAIAL 72
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P + + +NLG Y QG+ + A +A+ NP A Y NLG + AI
Sbjct: 73 DPANAVAHSNLGYAYHAQGRTEEAIAEFRRALELNPGDALVYYNLGNALGECSRRDEAIA 132
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
AYEQ L+ P+ A N LA N G D+ A+R
Sbjct: 133 AYEQALRYRPNYPAACFN--LANTLRNHGRLDRAIAAYR 169
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG AY + + AI + A NP A NLG + D+A+ Y+ AL +
Sbjct: 82 NLGYAYHAQGRTEEAIAEFRRALELNPGDALVYYNLGNALGECSRRDEAIAAYEQALRYR 141
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN+ + NL G++D A +A P A+ NLG + S A
Sbjct: 142 PNYPAACFNLANTLRNHGRLDRAIAAYRQAWRLVPGDADVAINLGNALVEQREFSEATAV 201
Query: 123 YEQCLKIDPDS 133
L++ PDS
Sbjct: 202 LRHALQLRPDS 212
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV ++ + + AI A +P A A +NLG Y + ++A+ ++ AL
Sbjct: 46 LHFLGVVAHQVGQQETAIDLIRRAIALDPANAVAHSNLGYAYHAQGRTEEAIAEFRRALE 105
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + NLG + D A E+A+ P Y A NL R+ G + AI
Sbjct: 106 LNPGDALVYYNLGNALGECSRRDEAIAAYEQALRYRPNYPAACFNLANTLRNHGRLDRAI 165
Query: 121 DAYEQCLKIDP 131
AY Q ++ P
Sbjct: 166 AAYRQAWRLVP 176
>gi|159028890|emb|CAO90695.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1261
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 235/394 (59%), Gaps = 10/394 (2%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+ L IGYVSPD+ H V FI + +HD+Q +++ Y + K D T E++
Sbjct: 355 QHKLKIGYVSPDFKRHPVGKFIAPIIKHHDHQKFEIYCYGEIRKVDEIT----EEIQSSC 410
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WR +G+ + +V +++D+IDIL++L GHT +N+L + +PAP+Q +++GY TTG
Sbjct: 411 DHWRSTFGLADAEVIEQIKQDRIDILIDLAGHTDDNRLPIFFSKPAPIQASYLGYFATTG 470
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+PTIDY ITD P +T++K E + RLP C++ Y PSPEA V P PAL++ +ITFG
Sbjct: 471 IPTIDYWITDHHLHPVDTEEKTSETIWRLPRCYVAYQPSPEALEVNPLPALSSEYITFGC 530
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD--SVRHRFLSTLEQLGLESLRVD 420
NN +K+ P +L +WA+IL A+P SRL++K D + L++ GL +V+
Sbjct: 531 LNNFSKLNPFLLSLWAKILQALPQSRLILKSHYHNLDDPEEKQSVELFLQEQGLNLEQVE 590
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L+ L D+ Y +DI LDTFPY G TTTC++L+MGVP +T+AG +G SLL
Sbjct: 591 LIDSPTLAEDYFALYHRIDIHLDTFPYNGCTTTCDALWMGVPVLTLAGDRKIQRMGNSLL 650
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+GL IA + +EYV A+ A D+ A+A LR SLR+ KS + D + L LE+ Y
Sbjct: 651 QAIGLGDWIAHSPEEYVNKAITFAQDLEAIAQLRTSLRERFQKSQLGDIEGLTLALENAY 710
Query: 541 RNMWHRYCKGDVPSL----KRMEMLQQQVVSEEP 570
+ MW + + + L +++ ++ Q ++ P
Sbjct: 711 QQMWKKLEQEKIQPLESGDQQISAMRSQTETQSP 744
>gi|226944845|ref|YP_002799918.1| glycosyl transferase family protein [Azotobacter vinelandii DJ]
gi|226719772|gb|ACO78943.1| glycosyl transferase,TPR repeat protein [Azotobacter vinelandii DJ]
Length = 1221
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 188/589 (31%), Positives = 285/589 (48%), Gaps = 49/589 (8%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G+A E + AI A +P + +NLG+ Y + N+ KA AL + P+
Sbjct: 34 GLALLESRRPQQAIEVLHRADGIDPEDPDTLHNLGIAYLKQGNIQKADHYLGQALEVLPS 93
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIE---------------KAIAANPTYAEA------- 102
F+++ L + G+ AA E I KA A N +
Sbjct: 94 FAKARLVLAKMRIDTGQYQAALEQIAIAEEKGANENQCLSLKAFALNKLHRHTETLQVQE 153
Query: 103 ------------YNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+NL YR A + Q L+ DP L A++Y
Sbjct: 154 EIRRRYPDDLLNLSNLADSYRMLTRFDEAEKTFLQLLERDPTQHKTFSGYLFAIHYNPRH 213
Query: 151 HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
+ L + W +RF + ++ + P++ L IG +S + H V I + L +
Sbjct: 214 SQEFLVKTITQWDERFSPPHPPRAQAED-RSPDKRLKIGLLSAGFRVHPVGQMITSALEH 272
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
++++ Y+ + D T R R++ W+ + +D+ +A +R+DKIDIL++
Sbjct: 273 LPRNEFELIAYTTSSEQDDLTQRIRQRCDD----WQAVMHLDDMDLAKQIRDDKIDILID 328
Query: 271 LTGHTANNKLGMMACQPAPVQVTWI-GYPNTTGLPTIDYRITDSLADPPETKQKHVEELI 329
L GH+ ++L MA +PAP+Q+ W+ G NTTGL IDY I+DS+ PP ++VE+LI
Sbjct: 329 LCGHSEGSRLPTMAQEPAPLQIKWVGGLNNTTGLKAIDYLISDSVETPPGVDHQYVEKLI 388
Query: 330 RLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL 389
RLP+ ++CY P P V P PALTNG++TFG FNN +K+ V++ WA I+ +P SRL
Sbjct: 389 RLPDDYICYQPRPMQPHVGPLPALTNGYVTFGCFNNPSKVNEIVIEHWASIMAQIPASRL 448
Query: 390 VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP----LILLNHDHMQAYSLMDISLDTF 445
++K + + R E G+E R+ L LLN Y+ +DI+LD +
Sbjct: 449 MLKGGQYENQAFIERISQAFETRGIERTRLKFEGQSPHLHLLN-----TYNQVDIALDPW 503
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
PY+G TTCE+L MGVP +T G A + L GL L+A + Y LA+ LAS
Sbjct: 504 PYSGGLTTCEALLMGVPVITYPGPSFAGRHSATHLVNAGLAELVADGWEHYRSLAVGLAS 563
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
D+ LA +R LR + SPVCD FA R +W RYC+G P+
Sbjct: 564 DLDTLATIRQGLRQQLKNSPVCDAPRFARHFTIAMRAIWQRYCEGKEPA 612
>gi|350561207|ref|ZP_08930046.1| Tetratricopeptide TPR_1 repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781314|gb|EGZ35622.1| Tetratricopeptide TPR_1 repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 676
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 178/596 (29%), Positives = 296/596 (49%), Gaps = 10/596 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG+A + A+ + + +P NL + R + +A + AL ++
Sbjct: 90 HLGIAQSFAVHTTDALESFRRSLSLDPTRVPTLVNLAKLQNARHDHAEAERLAREALRLR 149
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F + L Q + + A ++ +P + LG YR G + ++DA
Sbjct: 150 PGFRPAALALAKALAGQSQAEPALGILRDLNGQSPGDFDVLAELGETYRTLGLFAESVDA 209
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ-YTSWDNTKD 181
Q L I PD L +++ ++LF HR++G+R R + + + W + D
Sbjct: 210 CVQALAIAPDQHTLRSGYLFSLSNDERCPPERLFAEHREYGERVERPHREHWGGWKQSTD 269
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P+RPL +G VS D +H VSYF+E L D ++ Y D + R +
Sbjct: 270 PDRPLTVGMVSGDLRSHVVSYFLEPLLETLDRSRIRLHAYYTYPVRDTVSDRLKRHF--- 326
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+WRD+ + +VAA +R D++DIL++L+GHTA+N+L + A +PAPVQ + +GYPNTT
Sbjct: 327 -SVWRDVAHWRDDQVAAAIRADEVDILIDLSGHTAHNRLEVFARKPAPVQASMLGYPNTT 385
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
GL +DYR+ + PP E + + A V P P T + TF
Sbjct: 386 GLTAMDYRLMGQIGAPPGRMDSWFSEHLATVPVLTPFRYQQSAPDVVPPPLSTRSYPTFA 445
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
SFN + KI +++ WA+IL A+P++RL++ P D+VR L+QLG+ RV+
Sbjct: 446 SFNRVGKIGDGIIRAWAKILEALPSARLLIGNVPL--DAVRESVARRLDQLGVPLERVEF 503
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
P L +++ ++ +D+ LD +PY G TT +L+MGVP V+MAG + G ++L
Sbjct: 504 RPRTGLQ-EYLAMHAEVDVLLDAYPYNGGTTNQHALWMGVPVVSMAGPILPSRTGANVLG 562
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
GL + E EYV A+ SDV +L+ LR LR + +P+ A E+ R
Sbjct: 563 LAGLGDWVVDTEAEYVARAIAAVSDVESLSRLRQGLRAQLGANPLRQPATAARFFEAALR 622
Query: 542 NMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGSPGSVMPNGFNQ 597
MW R+C+G P+ R++++ + + E P + + + ++ + M +G +Q
Sbjct: 623 MMWRRWCEGLAPA--RLDVMPEAIGIEIPPELASSIEAAASRGWARSDAMASGTDQ 676
>gi|392381948|ref|YP_005031145.1| conserved protein of unknown function; glycosyltransferase and TPR
domains [Azospirillum brasilense Sp245]
gi|356876913|emb|CCC97706.1| conserved protein of unknown function; glycosyltransferase and TPR
domains [Azospirillum brasilense Sp245]
Length = 636
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 269/542 (49%), Gaps = 25/542 (4%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A F+ A NP A NLGV+ + + +AV Y+ A + P NLG
Sbjct: 101 AEAFFRRAIALNPKTLVAVANLGVLLRAQARRAEAVTLYERAGRLDPANWAHPYNLGNAL 160
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNN-----LGVLYRDAGSISLAIDAYEQCLKIDP 131
++ A + A+A P AE N L + R A +++ Q +D
Sbjct: 161 AEMNRLGEADDAYGAALALAPGRAEVRANRATRVLAMQGRAAEALAEIEAVVAQHGTVD- 219
Query: 132 DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYV 191
+ +RL M ++ + +AH DWG R+ + + K + IGYV
Sbjct: 220 ---SLHASRLYLMQFVPGLAMPAIAQAHADWGARYPDRPAPAVAAPAPK-----IRIGYV 271
Query: 192 SPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGI 251
SPD+ H V +F+E L HD ++VV Y+ D KT E++M W G+
Sbjct: 272 SPDFRAHPVGFFLEPVLANHDRSAFEVVCYANTANPDWKT----ERLMAHADHWVWTTGM 327
Query: 252 DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
D+ +A ++ D I ILV+L G T N+L + A + APVQ TW GY TTGLP +DY I+
Sbjct: 328 DDAALAQRIQADGIHILVDLAGQTFGNRLPVFARRAAPVQATWAGYVGTTGLPAMDYLIS 387
Query: 312 DSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITP 371
DS PP + +E ++R+P+ ++ + P +A V P P +T G TFGSFN L K+
Sbjct: 388 DSRQSPPGSDGWCIEGVVRMPDAYVPWAPPEDAPAVAPLPLVTRGHTTFGSFNALPKLNA 447
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL---LPLILLN 428
+V +WAR+L AVP SRL+++ R L+ E+ GL+ RVDL P +
Sbjct: 448 EVAALWARVLGAVPGSRLLLRTPGLDDAGTAARTLALFERAGLDPARVDLRGGAP----H 503
Query: 429 HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL 488
+ + Y +D++LD FPY+G TT E+L+MGVP VT+ G V+ L GL L
Sbjct: 504 REFLAGYGEVDVALDPFPYSGGLTTLEALWMGVPVVTLDGDRFCARHSVTHLASAGLSDL 563
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+A D YV A L +D LA LR LRD ++ SP +G F LE+ + MW R+
Sbjct: 564 VADGPDGYVAKAAALVADPAVLAALRGGLRDRLAASPALNGVRFTRALEAAFGVMWQRFQ 623
Query: 549 KG 550
G
Sbjct: 624 AG 625
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ G+ + +FD A+ A P N G++ + ++ A Y AL+
Sbjct: 14 LHRQGLVAAQAGRFDEALELIGRAIAAYPSVPVWWANYGLVMESLGDVAGAANAYAGALN 73
Query: 61 IKPNFSQSLNNL-GVVYTVQGKMDAA-AE-MIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
+ P+ +++ L + V+ D+A AE +AIA NP A NLGVL R +
Sbjct: 74 LDPSLEMAMDGLLSMAEAVRRAGDSARAEAFFRRAIALNPKTLVAVANLGVLLRAQARRA 133
Query: 118 LAIDAYEQCLKIDPDSR----NAGQNRLLAMNYINEGHD 152
A+ YE+ ++DP + N G N L MN + E D
Sbjct: 134 EAVTLYERAGRLDPANWAHPYNLG-NALAEMNRLGEADD 171
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P+ + L+ G+V G+ D A E+I +AIAA P+ + N G++ G ++ A
Sbjct: 6 MTPHEADGLHRQGLVAAQAGRFDEALELIGRAIAAYPSVPVWWANYGLVMESLGDVAGAA 65
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA 158
+AY L +DP A L + D EA
Sbjct: 66 NAYAGALNLDPSLEMAMDGLLSMAEAVRRAGDSARAEA 103
>gi|302878312|ref|YP_003846876.1| hypothetical protein Galf_1082 [Gallionella capsiferriformans ES-2]
gi|302581101|gb|ADL55112.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 793
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 288/580 (49%), Gaps = 40/580 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGVA+ ++ +F+ A+ + A NP A+A NLG K + A Y+ AL +
Sbjct: 213 NLGVAFKDLGRFEEAVASFRQALQINPDYAQAHCNLGATLKALNRPADAEASYRKALQLA 272
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ +NLG+V G+ A +A+ P EA +NLG L+ + G A
Sbjct: 273 PDYAEAYSNLGIVLQASGRWADAETCFVQALQLKPDLLEARSNLGHLFLENGRFLDAETC 332
Query: 123 YEQCLKIDPD---SRNAGQNRLLAMNYINEG-----------------HDDKLFEAHRDW 162
Y Q L+ PD + +A N + ++ ++E H + +F
Sbjct: 333 YRQVLQSAPDNAEAHSALGNVYMKLDRLDEAVACFRHAIELKPDFVVAHSNLIFALDLSG 392
Query: 163 GKRFMRLYSQYTSWD--------------NTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
LY + W+ N D ER L IGYVS D+ HS +Y L
Sbjct: 393 ELTPATLYEERKRWNAVHAAHLDPSRPHLNVADAERRLRIGYVSADFKAHSAAYAFGNML 452
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
V D + V+ YS + D ++ F+ V WR+I G+ ++ VA +RED+IDIL
Sbjct: 453 VNFDAGCFDVIAYSNTLVEDDLSLVFQRAVTG----WRNIVGLSDEAVACRIREDQIDIL 508
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V+L+GHTA N+L + A +PAP+Q++ GY TGL +D +D + PP + + E++
Sbjct: 509 VDLSGHTAGNRLLVFARKPAPIQISAWGYAAGTGLSAMDVLFSDRVVIPPAEQALYSEKI 568
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP + P V PAL+ G +TFGSFN L K + V WA+IL AVP SR
Sbjct: 569 SYLPSLICSFMPFNYPA-VNELPALSAGTVTFGSFNRLVKSSEAVYAAWAKILLAVPGSR 627
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
+++K V R + G+E R+ +L H+ A++ +DI+LD FP+
Sbjct: 628 MILKTHELDDAVVSARVAGYFVRAGVEVGRI-VLQGKTSREAHLAAFNQIDIALDPFPHG 686
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G T E L MGVP +T+ V S++T +GL IA+ EYV +A+Q A+++
Sbjct: 687 GGMTAIEGLMMGVPVITLRWPTMVGRVSASIMTTLGLTDWIAQTPQEYVDMAVQKAANLQ 746
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+L+ LR LR + S S + D Q + +E YR +W +C
Sbjct: 747 SLSALRGRLRGIFSTSIIGDQQAYVRCVEQEYRRLWREWC 786
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A LG + K + A+ Q ++ + P +Q+ NLGV + G+ + A
Sbjct: 171 PLFALGWKMLGAVLKLTGWHEAALTAMQTSVVLSPFDAQAQGNLGVAFKDLGRFEEAVAS 230
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+A+ NP YA+A+ NLG + + A +Y + L++ PD A N
Sbjct: 231 FRQALQINPDYAQAHCNLGATLKALNRPADAEASYRKALQLAPDYAEAYSN 281
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ LG V + G +AA ++ ++ +P A+A NLGV ++D G A+ +
Sbjct: 171 PLFALGWKMLGAVLKLTGWHEAALTAMQTSVVLSPFDAQAQGNLGVAFKDLGRFEEAVAS 230
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
+ Q L+I+PD A N + +N D
Sbjct: 231 FRQALQINPDYAQAHCNLGATLKALNRPAD 260
>gi|238926992|ref|ZP_04658752.1| tetratricopeptide TPR_2 repeat protein [Selenomonas flueggei ATCC
43531]
gi|238885226|gb|EEQ48864.1| tetratricopeptide TPR_2 repeat protein [Selenomonas flueggei ATCC
43531]
Length = 596
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 230/383 (60%), Gaps = 18/383 (4%)
Query: 173 YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTI 232
YT D T+ +R L IGY+SPD+ H+VSYF+ L + D +++ V Y A+ ++D+ T
Sbjct: 210 YTHEDVTRSTQRKLRIGYISPDFREHAVSYFLPPLLRHFDGEHFMVFCY-ALGRSDSVTE 268
Query: 233 RFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
RFR + + WRD+ G + A ++ EDKIDILV+L+GH+ +N L +MA +PAPVQ+
Sbjct: 269 RFRTRRV----TWRDLRGRPPRTAARLIAEDKIDILVDLSGHSQDNALPIMAYRPAPVQM 324
Query: 293 TWIGYPNTTGLPTIDYRITDSLADPPE---TKQKHVEELIRLPECFLCYTPS-----PEA 344
+ IGY NTTGL TIDY ++D + P + E+++RLP LCY P PE+
Sbjct: 325 SGIGYTNTTGLHTIDYFLSDEVCIPKGDTMAESGFTEQILRLPHSHLCYMPEEVRAMPES 384
Query: 345 GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR 404
G P NG++TFGSFNN AK+T ++L +W IL AV +S+LV+K K D+ H
Sbjct: 385 G--YEAPVYKNGYVTFGSFNNFAKVTDEMLLLWRGILDAVRDSKLVIKGKIASIDAGLHY 442
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
L + + RV+ P + D+++ Y +DI+LDT PY G TTCE+LYMGVP +
Sbjct: 443 AKQRLSMVNFDLDRVEFRPF---SPDYLEQYRDIDIALDTAPYNGGVTTCEALYMGVPVI 499
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
+M G H G S+LT G++ LI +N+ YV+ A+QLA +A LR M +S
Sbjct: 500 SMRGRTHGSRFGASILTNTGVRELIVENDISYVRRAVQLAESPKLIAGYHAGLRTNMKRS 559
Query: 525 PVCDGQNFALGLESTYRNMWHRY 547
P+ D + LES YR +WHR+
Sbjct: 560 PLMDAGGYMKELESAYREIWHRF 582
>gi|425460198|ref|ZP_18839680.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9808]
gi|389827193|emb|CCI21793.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9808]
Length = 1246
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 235/397 (59%), Gaps = 10/397 (2%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+ L IGYVSPD+ H V FI + +HD+Q +++ Y + K D T E++
Sbjct: 340 QHKLKIGYVSPDFKRHPVGKFIAPIIKHHDHQKFEIYCYGEIKKVDEIT----EEIKASC 395
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WR G+ + +V +++D+IDIL++L GHT +N+L + +PAP+Q +++GY TTG
Sbjct: 396 DHWRSTLGLTDAEVIEQIKQDQIDILIDLAGHTDDNRLPIFFSKPAPIQASYLGYFATTG 455
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+PTIDY ITD P +T++K E + RLP C++ Y PSPEA V P PAL++ +ITFG
Sbjct: 456 IPTIDYWITDHHLHPVDTEEKTSETIWRLPRCYVAYQPSPEALEVNPLPALSSEYITFGC 515
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD--SVRHRFLSTLEQLGLESLRVD 420
NN +K+ P +L +WA+IL A+P SRL++K D + L++ G +V+
Sbjct: 516 LNNFSKLNPFLLSLWAKILQALPQSRLILKSHYHNLDDPEEKQSVELFLQEQGFNLEQVE 575
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L+ L D+ Y +DI LDTFPY G TTTC++L+MGVP +T+AG +G SLL
Sbjct: 576 LIDSPTLAEDYFALYHRIDIHLDTFPYNGCTTTCDALWMGVPVLTLAGDRKIQRMGNSLL 635
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+GL+ IA + +EYV A+ A D+ A+A LR SLR+ KS + D + L LE+ Y
Sbjct: 636 QAIGLEDWIAHSPEEYVNKAITFAQDLEAIAQLRTSLRERFQKSQLGDVEGLTLALENAY 695
Query: 541 RNMWHRYCKGDVPSL----KRMEMLQQQVVSEEPSKF 573
+ MW + + + L +++ ++ Q ++ P +
Sbjct: 696 QQMWKKLEQEKIQPLESGDQQISAMRSQTETQSPLNY 732
>gi|440753447|ref|ZP_20932650.1| methyltransferase, FkbM family domain protein [Microcystis
aeruginosa TAIHU98]
gi|440177940|gb|ELP57213.1| methyltransferase, FkbM family domain protein [Microcystis
aeruginosa TAIHU98]
Length = 1246
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 235/397 (59%), Gaps = 10/397 (2%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+ L IGYVSPD+ H V FI + +HD Q +++ Y + K D T E++
Sbjct: 340 QHKLKIGYVSPDFKRHPVGKFIAPIIKHHDRQKFEIYCYGEIRKVDEIT----EEIQSSC 395
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WR G+ +++V +++D+IDIL++L GHT +N+L + +PAP+Q +++GY TTG
Sbjct: 396 DHWRSTLGLTDEQVIEQIKQDQIDILIDLAGHTDDNRLPIFFSKPAPIQASYLGYFATTG 455
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+PTIDY ITD P +T++K E + RLP C++ Y PSPEA V P PAL++ +ITFG
Sbjct: 456 IPTIDYWITDHHLHPVDTEEKTSETIWRLPRCYVAYQPSPEALEVNPLPALSSEYITFGC 515
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD--SVRHRFLSTLEQLGLESLRVD 420
NN +K+ P +L +WA+IL A+P SRL++K D + L++ GL +V+
Sbjct: 516 LNNFSKLNPFLLSLWAKILQALPQSRLILKSHYHNLDDPEEKQSVELFLQEQGLNLEQVE 575
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L+ L D+ Y +DI LDTFPY G TTTC++L+MGVP +T+AG +G SLL
Sbjct: 576 LIDSPTLAEDYFALYHRIDIHLDTFPYNGCTTTCDALWMGVPVLTLAGDRKIQRMGNSLL 635
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+GL IA + +EYV A+ A D+ A+A LR SLR+ KS + D + L LE+ Y
Sbjct: 636 QAIGLGDWIAHSPEEYVNKAITFAQDLEAIAQLRTSLRERFQKSQLGDIEGLTLALENAY 695
Query: 541 RNMWHRYCKGDVPSL----KRMEMLQQQVVSEEPSKF 573
+ MW + + + L +++ ++ Q ++ P +
Sbjct: 696 QQMWKKLEQEKIQPLESGDQQISAMRSQTETQSPLNY 732
>gi|421603831|ref|ZP_16046148.1| hypothetical protein BCCGELA001_35263 [Bradyrhizobium sp.
CCGE-LA001]
gi|404264064|gb|EJZ29427.1| hypothetical protein BCCGELA001_35263 [Bradyrhizobium sp.
CCGE-LA001]
Length = 709
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/587 (32%), Positives = 307/587 (52%), Gaps = 44/587 (7%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG A + + A+ Y+ A NP AEA N G R N D+A+ ALS
Sbjct: 128 LSNLGNASVALELHEEALHSYDKALALNPDLAEAHNGRGWALCRRRNYDEAIASLNRALS 187
Query: 61 IKPNFSQS-----------------------------------LNNLGVVYTVQGKMDAA 85
IKP+++ + L GV+ +Q ++ A
Sbjct: 188 IKPDYAAALANRAIALRELQRFDEALADGNRAIALAPDDANGWLARAGVLLQIQ-QIAQA 246
Query: 86 AEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145
+ E+A+A +P +A+ G+ G + A+ ++++ L I PD ++A N + ++
Sbjct: 247 SRDCEQALAIDPNSIQAHMMQGLCLAGLGRVDEALASFDRALDIQPDLQSAISNNIFTLD 306
Query: 146 YINEGHDDKLFEAHRDWGKRF-MRLYSQYTS-WDNTKDPERPLVIGYVSPDYFTHSVSYF 203
+ + ++ +A + W +R ++ S+ + DN+++P+R LV+GYVS D+ HS ++
Sbjct: 307 FAEDATVERHQQARQVWWERVGAKIASEASGPHDNSRNPDRRLVLGYVSSDFNAHSAAFI 366
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
+ L +HD +++V Y+ K DA T F+ K WRD + ++AA +R D
Sbjct: 367 FKPVLQHHDRAQFEIVCYACSSKVDATTSEFK----KIADRWRDASQWTDDRLAAEIRAD 422
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
+DIL++L+GHT N+LG+ A +PAP+QV G+ TGLPTIDY +D +A P +
Sbjct: 423 GVDILIDLSGHTRGNRLGVFARKPAPIQVHGWGHGTGTGLPTIDYLFSDPVAIPSAVRHL 482
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCA 383
E ++ LP CF+ P P+ P PA++NGF+TFG FN ++KI+ + + VW+RIL
Sbjct: 483 FAETIVDLP-CFVTLAPLPDGIARAPAPAISNGFVTFGVFNRISKISDEAVVVWSRILER 541
Query: 384 VPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLD 443
VP SRL++K VR L+ L + RVDLL L +H+ +++ +DI+LD
Sbjct: 542 VPGSRLLIKDVALDDRLVRDNLLARFAACRLPAERVDLLGATL-RSEHLASFNRVDIALD 600
Query: 444 TFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
FP G +T E+L MGVP V G+ ++LT +GL +A +E+ YV++A
Sbjct: 601 PFPQNGGVSTLEALQMGVPVVAKLGNSLPSRAAGAILTALGLPDWVADSEEAYVEIAASR 660
Query: 504 ASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
A+ + L LR L ++ S + ++A ++ YR MW RYC G
Sbjct: 661 AAGIGDLDKLRRELPGQINASAAGNPISYARAADAAYRAMWQRYCDG 707
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG + + A V A +P AEA +LGV D+A E Y+ AL+
Sbjct: 60 LHMLGTLESDAKNYQHAEVLLSRAVAVDPRSAEAHMSLGVALNGLRRHDEARESYRKALA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PN++ +L+NLG + A +KA+A NP AEA+N G + AI
Sbjct: 120 LRPNYALALSNLGNASVALELHEEALHSYDKALALNPDLAEAHNGRGWALCRRRNYDEAI 179
Query: 121 DAYEQCLKIDPD 132
+ + L I PD
Sbjct: 180 ASLNRALSIKPD 191
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A + LG + D N A A+++ P +++ +LGV + D A E KA+
Sbjct: 59 ALHMLGTLESDAKNYQHAEVLLSRAVAVDPRSAEAHMSLGVALNGLRRHDEARESYRKAL 118
Query: 94 AANPTYAEAYNNLGVLYRDAGSISL-----AIDAYEQCLKIDPDSRNAGQNRLLAM 144
A P YA A +NLG S++L A+ +Y++ L ++PD A R A+
Sbjct: 119 ALRPNYALALSNLG-----NASVALELHEEALHSYDKALALNPDLAEAHNGRGWAL 169
>gi|186477739|ref|YP_001859209.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
gi|184194198|gb|ACC72163.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phymatum
STM815]
Length = 789
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 274/537 (51%), Gaps = 6/537 (1%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
++D A A P+ A LG Y+ D LD A+ CY+ A + P + + + L
Sbjct: 256 RWDEAAHALTSAVELAPNDAAGYVELGDAYQHADKLDAAILCYRTATELAPRDAPAHHRL 315
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
V Q + D A E +KA++ P A + NLG + G AI +Y + + +D +
Sbjct: 316 AVALLKQRRADEALESAQKAVSLEPHSAVPHVNLGDVLSVLGDADGAIASYRRGIALDGE 375
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVS 192
A L + A R++G R ++ +D R L IG+VS
Sbjct: 376 MELAHNRLLFDLATHAPTPPAVTLVAAREFGARMA-ARARRCEHPAPQDDGRKLRIGFVS 434
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D H V FIE+ + + ++ ++ YS D T R +++ WR + +
Sbjct: 435 GDLQLHPVGIFIESVMEHFADGSFDLIAYSTRASEDDITARLKQRFTA----WRSLVNVR 490
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD 312
+++ M+R+D IDILV+L+GHT +N+L + A +PAPVQV+W+GY TTGL IDY + D
Sbjct: 491 DEQAVQMIRDDGIDILVDLSGHTVHNRLPVFAWKPAPVQVSWLGYFGTTGLNEIDYVLGD 550
Query: 313 SLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPK 372
P + +VE+ RLP+ +LC+TP V P P +G +TFG F L KITP
Sbjct: 551 PHVLPVAEESHYVEKTWRLPDSYLCFTPPNVDVAVGPLPMTLSGHVTFGYFGKLVKITPN 610
Query: 373 VLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
V+ W+R+L AVP ++L++K R G+++LR+ +L H+++
Sbjct: 611 VIAAWSRLLRAVPGAKLMMKSHELGAAHARRSAAEQFAAQGIDALRL-ILEGGSPRHEYL 669
Query: 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKN 492
+AY+ +DI L FPY G TTT E+L+MG P V + G ++ S+L GL IA++
Sbjct: 670 KAYNRVDIMLSPFPYPGGTTTAEALWMGTPVVALQGDRFVTHICESVLNAAGLGEWIARD 729
Query: 493 EDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
EDEY+ LA A+ LA LR LR SP+CD + FA L++ + MW +Y
Sbjct: 730 EDEYIALASAWAAQRERLAVLRARLRAQTLASPLCDARRFATNLKAAFEGMWAQYVS 786
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + A++ A P AEA NNLG KD +L AV YQ A+S +
Sbjct: 110 NLGNALREAGDANAAMMSCATAIELRPGYAEAYNNLGNALKDLGDLGNAVLAYQKAVSFR 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NL +G DA+ +A+A +P A++Y++L L G I AID
Sbjct: 170 PDYADAFGNLARAEAGRGDADASIAAFRRALALDPDRADSYDSLAKLLHARGEIDAAIDT 229
Query: 123 YEQCLKIDPDSRNAGQNRLLA 143
+Q + DP +A ++RLLA
Sbjct: 230 LQQATRRDP--ADAARHRLLA 248
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D I + NP+ A NNLG + R L +A+E Y+ A++++P+++++ NNL
Sbjct: 53 RADAGIALMRASIAANPN-AVYYNNLGNVLLGRRQLGEAIEGYRQAVNLRPDYAEAHNNL 111
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G G +AA AI P YAEAYNNLG +D G + A+ AY++ + PD
Sbjct: 112 GNALREAGDANAAMMSCATAIELRPGYAEAYNNLGNALKDLGDLGNAVLAYQKAVSFRPD 171
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+A N LA G D A R
Sbjct: 172 YADAFGN--LARAEAGRGDADASIAAFR 197
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + AI Y A + P AEA NNLG ++ + + A+ A+ ++
Sbjct: 76 NLGNVLLGRRQLGEAIEGYRQAVNLRPDYAEAHNNLGNALREAGDANAAMMSCATAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG G + A +KA++ P YA+A+ NL G +I A
Sbjct: 136 PGYAEAYNNLGNALKDLGDLGNAVLAYQKAVSFRPDYADAFGNLARAEAGRGDADASIAA 195
Query: 123 YEQCLKIDPD 132
+ + L +DPD
Sbjct: 196 FRRALALDPD 205
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG AY K D AI+ Y A P A A + L V + D+A+E Q A+S++P
Sbjct: 281 LGDAYQHADKLDAAILCYRTATELAPRDAPAHHRLAVALLKQRRADEALESAQKAVSLEP 340
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
+ + NLG V +V G D A + IA + A+N L
Sbjct: 341 HSAVPHVNLGDVLSVLGDADGAIASYRRGIALDGEMELAHNRL 383
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N + + L A Y L +P S +L+ G++ + DA ++ +IAAN
Sbjct: 9 NAALTHHQAGRLADAQALYDAILQTEPAQSDALHFSGLLACQTDRADAGIALMRASIAAN 68
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
P A YNNLG + + AI+ Y Q + + PD A N
Sbjct: 69 PN-AVYYNNLGNVLLGRRQLGEAIEGYRQAVNLRPDYAEAHNN 110
>gi|334126992|ref|ZP_08500928.1| TPR domain/SEC-C domain protein [Centipeda periodontii DSM 2778]
gi|333390294|gb|EGK61434.1| TPR domain/SEC-C domain protein [Centipeda periodontii DSM 2778]
Length = 566
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 179/456 (39%), Positives = 246/456 (53%), Gaps = 19/456 (4%)
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKID--PDSRNAG-QNRLLAMNYINEGHDDKLF 156
A AY+ LG G + AIDA+ + + P R N L A NY+ +L
Sbjct: 121 ASAYSMLGEALTLTGESAAAIDAFLASSRHETRPTQRAEEYSNALFAANYLPA----RLR 176
Query: 157 EAHRDWGKRFMRLYSQYTSWDNTKDPER---PLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
++ D + LY+ T + D R + IGY+SPD TH V I L HD
Sbjct: 177 SSYTDLAHGYGALYADVTPLASRADAVRGHDRIRIGYISPDLRTHPVGKLIRPLLALHDR 236
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ V Y+ ++ DA + R +WR+I G+ +VAA+VR D+IDILV+L G
Sbjct: 237 MRFAVCCYANCME-DALSHALR----ASADVWRNIQGMPAAEVAALVRTDEIDILVDLAG 291
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ-KHVEELIRLP 332
HT NN L ++A +PAPVQVT IGY NTTGLP IDY ++D DP T EE+IRLP
Sbjct: 292 HTQNNCLSVLAYKPAPVQVTGIGYFNTTGLPAIDYMLSDVHVDPAGTTDPAFTEEIIRLP 351
Query: 333 ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
CYT + PV P P NG++TFGSFNN +K+T VL +W +L VP SRL+VK
Sbjct: 352 HSHFCYTLPEDLPPVAPPPMERNGYVTFGSFNNFSKVTDDVLLLWRWLLDNVPRSRLIVK 411
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
K F R + G+ + RV++ + ++ Y+ MDI+LDTFPY G T
Sbjct: 412 SKLFDRAEGRAIAAERFVRSGIPTERVEMREF---SRGYLMEYADMDIALDTFPYTGGIT 468
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
TCE+L MGVP +T+ G H G SLLT L LIA +YVQ+A LAS L
Sbjct: 469 TCEALAMGVPVITLRGESHGARFGESLLTNADLAELIADTPADYVQIAATLASSPETLRT 528
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
LR +LR +++ +P+ D + + +E+ Y +W R+
Sbjct: 529 LRANLRTILAHAPLTDARTYVHDVEAAYAEIWERFV 564
>gi|16124374|ref|NP_418938.1| hypothetical protein CC_0119 [Caulobacter crescentus CB15]
gi|221233057|ref|YP_002515493.1| porphyrin biosynthesis protein [Caulobacter crescentus NA1000]
gi|13421226|gb|AAK22106.1| TPR domain protein [Caulobacter crescentus CB15]
gi|220962229|gb|ACL93585.1| porphyrin biosynthesis protein [Caulobacter crescentus NA1000]
Length = 747
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 272/509 (53%), Gaps = 8/509 (1%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
LG D +A E ++ A+ +KP++S++ NLG + G++ A +AI N
Sbjct: 230 TLGNALIDLARAAEAEESFRQAIRLKPDYSEAHCNLGCALKLSGRLTEAETCFRRAIQLN 289
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
P A+A+NNLG +++D G + A Y + + P+ A N LL +NY D
Sbjct: 290 PADAQAHNNLGDVFKDLGRFADAEAFYRAAIGLKPEYLEAHSNLLLCLNYFETSSPDTYL 349
Query: 157 EAHRDWGKRFMRLYS-QYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQN 215
+ +G + ++++W +P R L +G++S D +H V YF E+ + D
Sbjct: 350 AEAKQYGSVASAAATPKFSAWSIQPEPRR-LRVGFISGDLNSHPVGYFSESVFQHLDRDR 408
Query: 216 YKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT 275
+++ + K DA T R W I+G+D+ A + + +LV+L+GHT
Sbjct: 409 FELFAFPTTPKTDALTSRISPFFAG----WCPIFGMDDHAAATAIHTQGVHVLVDLSGHT 464
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
A+N+L + A +PAPVQ +W+GY TTGLP +DY + D +Q+ E L RLPE +
Sbjct: 465 ADNRLPVFAFRPAPVQASWLGYFATTGLPEMDYFLGDRYMVTETEQQRFTETLWRLPETW 524
Query: 336 LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 395
LC P + P+ P P LTNGF+TFG NL+K+ +V+ +W++IL AVP S+L++K KP
Sbjct: 525 LCLAPHERSIPINPPPVLTNGFMTFGCLGNLSKMNGEVVALWSQILRAVPESKLLLKAKP 584
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCE 455
F V + + G+ S R+ +L ++ + Y+ +D+ LDTFPY G TT+ +
Sbjct: 585 FVDAQVVADIQARFAREGVSSDRL-ILEGPSSRAEYFETYNRIDLVLDTFPYPGGTTSVD 643
Query: 456 SLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRM 515
+L+MGVP +T+AG +G S+ G +A++ +Y+ A+ AS V +A+ R
Sbjct: 644 ALWMGVPVLTLAGDRFLARLGESIARNAGQSAWVARDRADYLAKAVAFAS-VRDVAHDRP 702
Query: 516 SLRDLMSKSPVCDGQNFALGLESTYRNMW 544
+LR + +P+ D + FA T MW
Sbjct: 703 ALRRSVLTTPLFDPERFARDFGDTLWGMW 731
>gi|425435523|ref|ZP_18815973.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9432]
gi|389679930|emb|CCH91335.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9432]
Length = 1236
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 151/394 (38%), Positives = 233/394 (59%), Gaps = 10/394 (2%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+ L IGYVSPD+ H V FI + +HD+Q +++ Y + K D T E++
Sbjct: 330 QHKLKIGYVSPDFKRHPVGKFIAPIIKHHDHQKFEIYCYGEIRKVDEIT----EEIQSSC 385
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WR G+ +++V +++D+IDIL++L GHT +N+L + +PAP+Q +++GY TTG
Sbjct: 386 DHWRSTLGLTDEQVIEQIKQDRIDILIDLAGHTDDNRLPIFFSKPAPIQASYLGYFATTG 445
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+PTIDY ITD P +T++K E + RLP C++ Y PS EA V P PAL++ +ITFG
Sbjct: 446 IPTIDYWITDHHLHPVDTEEKTSETIWRLPRCYVAYQPSSEALEVNPLPALSSEYITFGC 505
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGLESLRVD 420
NN +K+ P +L +WA+IL A+P SRL++K D + L++ G +V+
Sbjct: 506 LNNFSKLNPFLLSLWAKILQALPQSRLILKSHYHNLDDTEEKQSVELFLQEQGFNLEQVE 565
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L+ L D+ Y +DI LDTFPY G TTTC++L+MGVP +T+AG +G SLL
Sbjct: 566 LIDSPTLAEDYFALYHRIDIHLDTFPYNGCTTTCDALWMGVPVLTLAGDRKIQRMGNSLL 625
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+GL IA + +EYV A+ A D+ A+A LR SLR+ KS + D + L LE+ Y
Sbjct: 626 QAIGLGDWIAHSPEEYVNKAITFAQDLEAIAQLRTSLRERFQKSQLGDIEGLTLALENAY 685
Query: 541 RNMWHRYCKGDVPSL----KRMEMLQQQVVSEEP 570
+ MW + + + L +++ ++ Q ++ P
Sbjct: 686 QQMWKKLEQEKIQPLESGDQQISAMRSQTETQSP 719
>gi|115350207|ref|YP_772046.1| hypothetical protein Bamb_0151 [Burkholderia ambifaria AMMD]
gi|115280195|gb|ABI85712.1| TPR repeat-containing protein [Burkholderia ambifaria AMMD]
Length = 833
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 277/556 (49%), Gaps = 15/556 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL ++ A+V + A PH A+A N G + +L A CY+ AL +
Sbjct: 279 NLSGVRRRQARYAQALVHAQEAIRIAPHLADAHNQAGNAHHGLGDLVAAQACYRTALELN 338
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P S + +NL VV + + A +A+A Y NLG + R G++ A+ A
Sbjct: 339 PADSGTCHNLSVVLLKRERHADALAYCRQALAGGRPTVSMYVNLGDILRAQGNVDAAVPA 398
Query: 123 YEQCLKI--DPDSRNAGQ--NRLL--AMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
Y L + D S +A + RLL A D L +A R +G+ ++YT
Sbjct: 399 YRDALALVRDDASDDAAEVLGRLLFAAAASATVSPADYLNDARR-YGRHLAARSTRYTHD 457
Query: 177 DNTKDPE---RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
+ + RPL +G+VS D H V F+E+ + D VY+ +ADA T R
Sbjct: 458 VRARAADALHRPLRVGFVSGDLRQHPVGIFVESVFAHLDRTRVAPYVYTTSDEADAITAR 517
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
+ +WR I G D + A + +D ID+LV+L GHT + L +PAPVQ +
Sbjct: 518 LKPHA----AVWRSIAGCDPRAAARTIHDDGIDVLVDLAGHTQASGLAAFGWKPAPVQAS 573
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL 353
W+G+ +TG IDY I D+ P + VE+ LP+ +LC+TP + V P P
Sbjct: 574 WLGFFASTGCDAIDYFIGDARTLPADEAHHFVEQPWHLPDSYLCFTPPSDDVAVGPLPMA 633
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
NG +TFG F L K+ V++VW+R+L A+P +RL++K + +VR + + G
Sbjct: 634 ANGHVTFGCFGKLVKLGDDVVRVWSRVLDALPGARLLLKARELEQAAVRDATAARFARHG 693
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+++ R+ L ++ AY+ +D++L FPY G TTT E+L+MGVP + M G
Sbjct: 694 IDASRL-LFDGASPRAEYFNAYNRIDVALSPFPYPGGTTTAEALWMGVPVLGMKGGRFVT 752
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
++ SLL G+ IA +ED+YV A+ A LA LR +LR+ SP+CD FA
Sbjct: 753 HICESLLHAAGMPDWIAGDEDDYVAKAVAAAQGGARLAALRATLRERTLASPLCDAARFA 812
Query: 534 LGLESTYRNMWHRYCK 549
LE + MW RY +
Sbjct: 813 RNLEDAFAGMWTRYTE 828
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E + D AI Y A P EA NNLG +D + +A++ A+ ++
Sbjct: 76 NLGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMQSCSRAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG V G++DAAA KAIA +P YAEA++NLG + R + AI
Sbjct: 136 PGYAEAYNNLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHSNLGNVLRTQERHADAIVH 195
Query: 123 YEQCLKIDP 131
Y + +++ P
Sbjct: 196 YRRAIELSP 204
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LG+ ++ ++D + E + P A NNLG + ++ LD A+ Y+ A++
Sbjct: 41 MHFLGLLACQLKQYDAGLALMERSLAARPD-ASYFNNLGNMLRECGRLDDAIAHYRRAVA 99
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P++ ++ NNLG A + +AI P YAEAYNNLG + +D G + A
Sbjct: 100 LRPDYPEAHNNLGNALRDARDPAEAMQSCSRAIELRPGYAEAYNNLGNVLQDLGELDAAA 159
Query: 121 DAYEQCLKIDPDSRNAGQN 139
+Y + + P A N
Sbjct: 160 ASYGKAIAFHPAYAEAHSN 178
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
+A+ E + A Y+ H P +A + LG++ D + + +L+ +P+
Sbjct: 12 LAHHEAGRLGEAKALYDAILHAEPGQPDAMHFLGLLACQLKQYDAGLALMERSLAARPDA 71
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
S NNLG + G++D A +A+A P Y EA+NNLG RDA + A+ + +
Sbjct: 72 SY-FNNLGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMQSCSR 130
Query: 126 CLKIDP 131
+++ P
Sbjct: 131 AIELRP 136
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A+ A P AEA NNLG + +D LD A Y A++
Sbjct: 110 NLGNALRDARDPAEAMQSCSRAIELRPGYAEAYNNLGNVLQDLGELDAAAASYGKAIAFH 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P ++++ +NLG V Q + A +AI +P A + LG+ G +S A+
Sbjct: 170 PAYAEAHSNLGNVLRTQERHADAIVHYRRAIELSPALPAACHGLGLSLWALGELSEAV 227
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ + D A Y A F+P AEA +NLG + + ++ A+ Y+ A+ +
Sbjct: 144 NLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHSNLGNVLRTQERHADAIVHYRRAIELS 203
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMI 89
P + + LG+ G++ A ++
Sbjct: 204 PALPAACHGLGLSLWALGELSEAVSVL 230
>gi|374576416|ref|ZP_09649512.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
gi|374424737|gb|EHR04270.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
Length = 708
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 287/546 (52%), Gaps = 9/546 (1%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G A + +D AI A P A A + V ++ D+A+ A+++ P+
Sbjct: 166 GWALCRVRAYDEAIASLNRALSIKPDYASALSTRAVALRELQRFDEAMADCNRAIALAPD 225
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ + + ++ A EKA+A +P +++A++ LG G + A+ +++
Sbjct: 226 DANGWLRRASILLLTRQVAEALSDCEKALATDPGFSQAHSLLGQCLAALGRVDEALASFD 285
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF--MRLYSQYTSWDNTKDP 182
+ + I+PD ++ +++ +++I + + +A W ++ + +N++DP
Sbjct: 286 RAIDIEPD-QSTISSKIFTLDFIADASVAQHQQARHVWWEQIGAKIASAAAAPHENSRDP 344
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+R LV+GYVS D+ HS ++ + L +HD +++V Y+ VK DA T F+ +
Sbjct: 345 DRRLVLGYVSSDFHAHSAAFIFKPVLQHHDRARFEIVCYACSVKTDATTREFQGMADR-- 402
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WRD + ++AA +R D +DIL++L+GHT+ N+LG+ A +PAPVQ G+ TG
Sbjct: 403 --WRDASQWSDDRLAAQIRADGVDILIDLSGHTSGNRLGVFARKPAPVQAHGWGHGTGTG 460
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
LPTIDY +D +A P + E ++ LP CF+ P P PTPA+ NGFITFG
Sbjct: 461 LPTIDYLFSDPVAIPVAVRHLFAETIVDLP-CFVTLAPLPAGIARAPTPAIANGFITFGV 519
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN ++KI+ + ++VW+RIL VP SRL++K VR L+ L + RVDLL
Sbjct: 520 FNRISKISNEAVEVWSRILERVPGSRLLIKDTALDAQLVRDNLLARFAACRLPAERVDLL 579
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ +H+ A++ +DI LD FP G +T E+L MGVP V G S+LT
Sbjct: 580 GATSRD-EHLAAFNRVDIGLDPFPQNGGVSTWEALQMGVPVVAKLGHSLPSRAAGSILTA 638
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+GL +A +++ YV++A + L LR L + + + ++A ++ YR
Sbjct: 639 LGLPEWVADSDEAYVEIAASRGLQIGELDKLRGELPGQIRAAAAGNPVSYARAVDDAYRA 698
Query: 543 MWHRYC 548
MW RYC
Sbjct: 699 MWKRYC 704
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG E + A V A +P AEA +LGV ++A E Y+ AL+
Sbjct: 60 LHLLGALESEAKNYRQAQVLLSRAVAVDPRSAEAHTSLGVALNGLKRHNEARESYRKALA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PN++ +L+NLG A E +KA+A + +EA+N G + AI
Sbjct: 120 LRPNYALALSNLGNASAALELYQEALESYDKALAIDGKLSEAHNGRGWALCRVRAYDEAI 179
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
+ + L I PD +A R +A+ +
Sbjct: 180 ASLNRALSIKPDYASALSTRAVALRELQR 208
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 3/154 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LGVA + + + A Y A P+ A A +NLG + +A+E Y AL+I
Sbjct: 96 SLGVALNGLKRHNEARESYRKALALRPNYALALSNLGNASAALELYQEALESYDKALAID 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
S++ N G D A + +A++ P YA A + V R+ A+
Sbjct: 156 GKLSEAHNGRGWALCRVRAYDEAIASLNRALSIKPDYASALSTRAVALRELQRFDEAMAD 215
Query: 123 YEQCLKIDPDSRNAGQNR---LLAMNYINEGHDD 153
+ + + PD N R LL + E D
Sbjct: 216 CNRAIALAPDDANGWLRRASILLLTRQVAEALSD 249
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 33/179 (18%)
Query: 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV 78
V+ EL P+ A + LG + + N +A A+++ P +++ +LGV
Sbjct: 45 VYREL-LELAPNQFIALHLLGALESEAKNYRQAQVLLSRAVAVDPRSAEAHTSLGVALNG 103
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
+ + A E KA+A P YA A +NL G+ S A++ Y++ L+
Sbjct: 104 LKRHNEARESYRKALALRPNYALALSNL-------GNASAALELYQEALE--------SY 148
Query: 139 NRLLAMNYINEGHDDKLFEAH--RDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDY 195
++ LA+ D KL EAH R W +R Y + + N R L I PDY
Sbjct: 149 DKALAI-------DGKLSEAHNGRGWALCRVRAYDEAIASLN-----RALSI---KPDY 192
>gi|357407018|ref|YP_004918942.1| TPR domain/SEC-C motif domain protein (fragment), partial
[Methylomicrobium alcaliphilum 20Z]
gi|351719683|emb|CCE25359.1| TPR domain/SEC-C motif domain protein (fragment) [Methylomicrobium
alcaliphilum 20Z]
Length = 488
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 269/490 (54%), Gaps = 14/490 (2%)
Query: 57 MALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI 116
M+ S K F+Q GV QG D AA +++A + N + + LG R G +
Sbjct: 1 MSDSFKNVFAQ-----GVAAFEQGNYDEAAAFLKEAKSMNTDDSRVFRVLGNCLRLLGKV 55
Query: 117 SLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS-QYTS 175
AI Y + L+I D N Q + +NY +E E H+ W + + Y +Y
Sbjct: 56 DEAISVYREGLQIKYD-LNTHQRLINTLNYSDEPPSLVALE-HKKWAEAYTNHYVLKYKL 113
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR 235
+ + IGYVSPD+ H V+YF+ + H+ +++ Y+ + + D T +F+
Sbjct: 114 SLKPRSKHLKIRIGYVSPDFNAHPVAYFLLPIIQNHNKDIFEIFCYANINQEDGVTHQFK 173
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
+ W DI + ++ +++D IDIL+++ G T+ N+L + A + APVQVT++
Sbjct: 174 LAADR----WIDIRHMSTVQLFDQIQQDAIDILIDVAGLTSGNRLDVFALRAAPVQVTYL 229
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALT 354
GYP TTGL T+DYR+ DS++DP + H E+L RLP+CFLC+ PE + P +
Sbjct: 230 GYPGTTGLKTMDYRLVDSISDPQNVSDEWHSEKLYRLPDCFLCFRLPPENLKINDAPCQS 289
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
F+TFG+FN ++KIT + + +W +IL AVP+S+ V+K + F ++R GL
Sbjct: 290 KSFVTFGTFNKISKITDRTIALWVQILQAVPDSKFVLKGRGFEKKVEQNRIKKRFASAGL 349
Query: 415 ESL-RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
E + R+ L +H+ Y+ +DI+LDTFPY GTTTT ++++MGVP + + G H
Sbjct: 350 EQIDRLVLYGFSPKRSEHLLLYNELDIALDTFPYNGTTTTMQAIFMGVPVIALDGKSHVA 409
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
V S+L+ +G L+A +E++Y A+ LA+D +A+ + LR ++ SP+ + NF
Sbjct: 410 RVSQSILSAIGANELVAMDEEDYFLKAVHLANDKERIAHYKKELRSMLEDSPIRNEMNFI 469
Query: 534 LGLESTYRNM 543
LE YR M
Sbjct: 470 ANLEEAYRRM 479
>gi|172059229|ref|YP_001806881.1| hypothetical protein BamMC406_0164 [Burkholderia ambifaria MC40-6]
gi|171991746|gb|ACB62665.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
Length = 833
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 277/556 (49%), Gaps = 15/556 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL ++ A+V + A P A+A N G + +L A CY+ AL +
Sbjct: 279 NLSGVRRRQARYADALVHAQDAVRIAPDLADAHNQAGNAHHGLGDLVAAQACYRTALELN 338
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P S + +NL VV + + A +A+A Y NLG + R G++ A+ A
Sbjct: 339 PADSGACHNLSVVLLKRERHAEALAYCRRALAGGRPTVSMYVNLGDILRAQGNVDAAVPA 398
Query: 123 YEQCLKI--DPDSRNAGQ--NRLL--AMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
Y L + D S +A + RLL A D L +A R +G+ ++YT
Sbjct: 399 YRDALALVRDDASDDAAEVLGRLLFAAAASATVSPADYLNDARR-YGRHLAARSTRYTHD 457
Query: 177 DNTKDPE---RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
+ + RPL +G+VS D H V F+E+ + D VY+ +ADA T R
Sbjct: 458 VRARAADALHRPLQVGFVSGDLRQHPVGIFLESVFAHLDRTRVAPYVYTTSDEADAITAR 517
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
+ +WR I G D + A + +D ID+LV+L GHT + L +PAPVQ +
Sbjct: 518 LKPHA----AVWRSIAGCDPRAAARTIHDDGIDVLVDLAGHTQASGLAAFGWKPAPVQAS 573
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL 353
W+G+ +TG IDY I D+ P + VE+ LP+ +LC+TP + V P P
Sbjct: 574 WLGFFASTGCDAIDYFIGDARTLPADEAHHFVEQPWHLPDSYLCFTPPSDDAAVGPLPMA 633
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
NG +TFG F L K+ V++VW+R+L A+P +RL++K + +VR + + G
Sbjct: 634 ANGHVTFGCFGKLVKLGDDVVRVWSRVLDALPGARLLLKARELEQAAVRDATAARFARHG 693
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+++ R+ L ++ AY+ +D++L FPY G TTT E+L+MGVP + M G
Sbjct: 694 IDASRL-LFDGASPRAEYFAAYNRIDVALSPFPYPGGTTTAEALWMGVPVLGMKGGRFVT 752
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
++ SLL G+ IA +ED+YV A+ A D LA LR +LR+ SP+CD FA
Sbjct: 753 HICESLLHAAGMPDWIAGDEDDYVAKAVAAAQDGARLAVLRATLRERTLASPLCDAARFA 812
Query: 534 LGLESTYRNMWHRYCK 549
LE + MW RY +
Sbjct: 813 RNLEDAFVGMWTRYTE 828
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+G E + D AI Y A P EA NNLG +D + +A++ A+ ++
Sbjct: 76 NVGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMQSCSRAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG V G++DAAA KAIA + YA+AY+NLG + R G + AI
Sbjct: 136 PGYAEAYNNLGNVLQDLGELDAAAASYGKAIAFHLAYADAYSNLGNVLRAQGRHADAIVH 195
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE 149
Y + ++++P R A L++ + E
Sbjct: 196 YRRAIELNPALRVACHGLGLSLWALGE 222
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
+A+ E + A Y+ H P +A + LG++ D + + +L+ +P+
Sbjct: 12 LAHHEAGRLGEAKTLYDAILHAQPGQPDAMHFLGLLACQLKQYDAGLVLMERSLAERPDA 71
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
S NN+G + G++D A +A+A P Y EA+NNLG RDA + A+ + +
Sbjct: 72 SY-FNNVGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMQSCSR 130
Query: 126 CLKIDP 131
+++ P
Sbjct: 131 AIELRP 136
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A+ A P AEA NNLG + +D LD A Y A++
Sbjct: 110 NLGNALRDARDPAEAMQSCSRAIELRPGYAEAYNNLGNVLQDLGELDAAAASYGKAIAFH 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
++ + +NLG V QG+ A +AI NP A + LG+ G +S
Sbjct: 170 LAYADAYSNLGNVLRAQGRHADAIVHYRRAIELNPALRVACHGLGLSLWALGELS 224
>gi|386401848|ref|ZP_10086626.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM1253]
gi|385742474|gb|EIG62670.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM1253]
Length = 708
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/546 (30%), Positives = 287/546 (52%), Gaps = 9/546 (1%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G A + +D AI A P A A + V ++ D+A+ A+++ P+
Sbjct: 166 GWALCRLRAYDEAIASLNRALSIKPDYASALSTRAVALRELQRFDEAMADCNRAIALAPD 225
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ + + ++ A E A+A +P +++A++ LG G + A+ +++
Sbjct: 226 DANGWLRRASILLLTRQVAEALADCEMALATDPGFSQAHSLLGQCLAALGRVDEALASFD 285
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW--DNTKDP 182
+ L I+PD ++ +++ ++++ + + +A W ++ + + DN++DP
Sbjct: 286 RALDIEPD-QSTISSKIFTLDFMADASVAQHQQARHVWWEQIGAKIASAAAGPHDNSRDP 344
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+R LV+GYVS D+ HS ++ + L +HD +++V Y+ K DA T F+ +
Sbjct: 345 DRRLVLGYVSSDFHAHSAAFVFKPVLQHHDQAQFEIVCYACSSKTDATTREFQGIADR-- 402
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WRD + ++AA +R D +DIL++L+GHT+ N+LG+ A +PAPVQV G+ TG
Sbjct: 403 --WRDASQWSDDRLAAQIRADGVDILIDLSGHTSGNRLGVFARKPAPVQVHGWGHGTGTG 460
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
LPTIDY +D +A P + E ++ LP CF+ P P PTPA+ NGF+TFG
Sbjct: 461 LPTIDYLFSDPVAIPVAVRHLFAETIVDLP-CFVTLAPLPAGIARAPTPAIANGFVTFGV 519
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN ++KI+ + ++VW+RIL VP SRL++K VR L+ L + RVDLL
Sbjct: 520 FNRISKISNEAVEVWSRILERVPGSRLLIKDTALDAQLVRDNLLARFAACRLPAERVDLL 579
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ +H+ ++ +DI LD FP G +T E+L MGVP V G S+L
Sbjct: 580 GATSRD-EHLATFNRVDIGLDPFPQNGGVSTWEALQMGVPVVAKLGHSLPSRAAASILAA 638
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+GL +A +++ YV++A S ++ L LR L + + + ++A ++ YR
Sbjct: 639 LGLPDWVADSDEAYVEIAASRGSQISELDKLRGELPGQIKAAAAGNPVSYAQAVDDAYRA 698
Query: 543 MWHRYC 548
MW RYC
Sbjct: 699 MWKRYC 704
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV E + A V A +P AEA +LGV ++A E Y+ AL+
Sbjct: 60 LHLLGVLESEAKNYQQAQVLLSRAVAVDPRSAEAHMSLGVALNGLKRHNEARESYRKALA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+PN++ +L+NLG A E +KA+A + +EA+N G + AI
Sbjct: 120 FRPNYALALSNLGNASAALELYQEALESYDKALAIDGKLSEAHNGRGWALCRLRAYDEAI 179
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
+ + L I PD +A R +A+ +
Sbjct: 180 ASLNRALSIKPDYASALSTRAVALRELQR 208
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LGVA + + + A Y A F P+ A A +NLG + +A+E Y AL+I
Sbjct: 96 SLGVALNGLKRHNEARESYRKALAFRPNYALALSNLGNASAALELYQEALESYDKALAID 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
S++ N G D A + +A++ P YA A + V R+ A+
Sbjct: 156 GKLSEAHNGRGWALCRLRAYDEAIASLNRALSIKPDYASALSTRAVALRELQRFDEAMAD 215
Query: 123 YEQCLKIDPDSRNAGQNR 140
+ + + PD N R
Sbjct: 216 CNRAIALAPDDANGWLRR 233
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y P+ A + LGV+ + N +A A+++ P +++ +LGV
Sbjct: 46 YRELLELAPNQFIALHLLGVLESEAKNYQQAQVLLSRAVAVDPRSAEAHMSLGVALNGLK 105
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+ + A E KA+A P YA A +NL G+ S A++ Y++ L+ ++
Sbjct: 106 RHNEARESYRKALAFRPNYALALSNL-------GNASAALELYQEALE--------SYDK 150
Query: 141 LLAMNYINEGHDDKLFEAH--RDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDY 195
LA+ D KL EAH R W +R Y + + N R L I PDY
Sbjct: 151 ALAI-------DGKLSEAHNGRGWALCRLRAYDEAIASLN-----RALSI---KPDY 192
>gi|425450473|ref|ZP_18830299.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
7941]
gi|389768684|emb|CCI06277.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
7941]
Length = 1236
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 232/397 (58%), Gaps = 10/397 (2%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+ L IGYVSPD+ H V FI + +HD Q +++ Y + K D T E++
Sbjct: 330 QHKLKIGYVSPDFKRHPVGKFIAPIIKHHDRQKFEIYCYGEIRKVDEIT----EEIQSSC 385
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
WR G+ + +V +++D+IDIL++L GHT +N+L + +PAP+Q +++GY TTG
Sbjct: 386 DHWRSTLGLTDAEVIEQIKQDQIDILIDLAGHTEDNRLPIFFSKPAPIQASYLGYFATTG 445
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+PTIDY ITD P +T++K E + RLP C++ Y PS EA V P PAL++ +ITFG
Sbjct: 446 IPTIDYWITDHHLHPVDTEEKTSETIWRLPRCYVAYQPSSEALEVNPLPALSSEYITFGC 505
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGLESLRVD 420
NN +K+ P +L +WA+IL A+P SRL++K D + L++ G +V+
Sbjct: 506 LNNFSKLNPFLLSLWAKILQALPQSRLILKSHYHNLDDTEEKQSVELFLQEQGFNLEQVE 565
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L+ L D+ Y +DI LDTFPY G TTTC++L+MGVP +T+AG +G SLL
Sbjct: 566 LIDSPTLAEDYFALYHRIDIHLDTFPYNGCTTTCDALWMGVPVLTLAGDRKIQRMGNSLL 625
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+GL IA + +EYV A+ A D+ A+A LR SLR+ KS + D + L LE+ Y
Sbjct: 626 QAIGLGDWIAHSPEEYVNKAITFAQDLEAIAQLRTSLRERFQKSQLGDIEGLTLALENAY 685
Query: 541 RNMWHRYCKGDVPSL----KRMEMLQQQVVSEEPSKF 573
+ MW + + + L +++ ++ Q ++ P +
Sbjct: 686 QQMWKKLEQEKIQPLESGDQQISAMRSQTETQSPLNY 722
>gi|393770118|ref|ZP_10358624.1| tpr domain protein [Methylobacterium sp. GXF4]
gi|392724408|gb|EIZ81767.1| tpr domain protein [Methylobacterium sp. GXF4]
Length = 713
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 274/548 (50%), Gaps = 8/548 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y GV + ++A +A + P + L + +R + D A+ + AL
Sbjct: 166 YLAGVIAARTNRPELAYDLISIALYREPKNPLFFSGLSTVLTNRGDHDGAISALEKALEF 225
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+ + + N+ VY + + A E+AI P A A++N G G + A++
Sbjct: 226 DPDLAMAHANIAGVYQRRFRYGEALRHAERAIVLEPGNAGAHSNRGSALLALGRLGEAVE 285
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
A+++ L +DP NRL A Y + + D+G+R+ + + N +D
Sbjct: 286 AFDRALGLDPSKLFVASNRLFAKLYAADIPHAEYAADALDYGRRYADPLLRRRPFANDRD 345
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
PER L +G+VS D H++ F E L D + V+ Y DA + R K +
Sbjct: 346 PERKLRVGFVSGDLCNHALVRFFEPYLRAIDRDSMSVLAYMTHASEDAFSRRL--KPLFD 403
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
G W ++ +D+ + A + D IDILV+L+GH+A N+L + A +PAPVQVTWIG+P TT
Sbjct: 404 G--WHNLANLDDDEAADRIEADAIDILVDLSGHSAGNRLLVFARKPAPVQVTWIGHPGTT 461
Query: 302 GLPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTN-GFIT 359
GL IDYR+TD+ DP + H E L RLP Y PV + G+IT
Sbjct: 462 GLAAIDYRLTDASTDPLGLAEPLHAERLWRLPRVSATYAGVDNLPPVRERAPFEDVGYIT 521
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FG FN L K+ VL WA IL AVP SRL + VR + L GL RV
Sbjct: 522 FGCFNRLTKVCDAVLTTWASILDAVPESRLFMVVGDIGTPEVREAVETRLTAAGLPLDRV 581
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
P + + + + Y +DI+LD +PY G TT+ ++L MGVP V ++G A VG S+
Sbjct: 582 IFQPRV--SSGYHELYHRVDIALDPYPYNGGTTSFDTLSMGVPFVALSGDHAAARVGSSI 639
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L +GL L+A ++D YV +A LA D L +R LR+ + SP+ D A +++
Sbjct: 640 LRVIGLPELVADSQDAYVAIARDLALDRDRLRTIRAGLRERLHASPLMDHAGLAADVDAA 699
Query: 540 YRNMWHRY 547
+R MW ++
Sbjct: 700 FRAMWRQW 707
>gi|170698735|ref|ZP_02889800.1| TPR repeat-containing protein [Burkholderia ambifaria IOP40-10]
gi|170136360|gb|EDT04623.1| TPR repeat-containing protein [Burkholderia ambifaria IOP40-10]
Length = 833
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 277/556 (49%), Gaps = 15/556 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL ++ A+V + A P A+A N G + +L A CY+ AL +
Sbjct: 279 NLSGVRRRQARYAQALVHAQDAIRIAPELADAHNQAGNAHHGLGDLVAAQACYRTALELN 338
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P S + +NL VV + + A +A+A Y NLG + R G++ A+ A
Sbjct: 339 PADSGACHNLSVVLLKRERHAEALAYCRQALAGGRPTVSMYVNLGDILRAQGNVDAAVPA 398
Query: 123 YEQCLKI--DPDSRNAGQ--NRLL--AMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTS- 175
Y L + D S +A + RLL A D L +A R +G+ ++YT
Sbjct: 399 YRDALALVRDDASDDAAEVLGRLLFAAAASATVSPADYLNDARR-YGRHLAARSTRYTHD 457
Query: 176 -WDNTKDP-ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
+ D RPL +G+VS D H V F+E+ + D VY+ +ADA T R
Sbjct: 458 VRERAADALHRPLRVGFVSGDLRQHPVGTFLESVFAHLDCTRIAPYVYTTSDEADAITAR 517
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
+ +WR I G D + A + +D ID+LV+L GHT + L +PAPVQ +
Sbjct: 518 LK----PHAAVWRSIVGCDPQAAARTIHDDGIDVLVDLAGHTQASGLAAFGWKPAPVQAS 573
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL 353
W+G+ +TG IDY I D+ P + VE+ RLP+ +LC+TP + V P P
Sbjct: 574 WLGFFASTGSDAIDYFIGDARTLPADEAHHFVEQPWRLPDSYLCFTPPSDDVAVGPLPMA 633
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
NG +TFG F L K+ V++VW+R+L +P +RL++K + +VR + + G
Sbjct: 634 ANGHVTFGCFGKLVKLGDDVVRVWSRVLEELPGARLLLKARELEQAAVRDATAARFARHG 693
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+++ R+ L ++ AY+ +D++L FPY G TTT E+L+MGVP + M G
Sbjct: 694 IDASRL-LFDGASPRAEYFNAYNRIDVALSPFPYPGGTTTAEALWMGVPVLGMKGGRFVT 752
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
++ SLL G+ IA +ED+YV A+ A D LA LR +LR+ SP+CD FA
Sbjct: 753 HICESLLHAAGMPDWIAGDEDDYVAKAVAAAQDGARLAALRATLRERTLASPLCDAARFA 812
Query: 534 LGLESTYRNMWHRYCK 549
LE + MW RY +
Sbjct: 813 RNLEDAFVGMWTRYTE 828
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E + D AI Y A P EA NNLG +D + +A++ A+ ++
Sbjct: 76 NLGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMQSCSRAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG V G++DAAA KAIA +P YAEA++NLG + R + AI
Sbjct: 136 PGYAEAYNNLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHSNLGNVLRAQDRHADAIVH 195
Query: 123 YEQCLKIDP 131
Y + +++ P
Sbjct: 196 YRRAIELSP 204
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LG+ ++ ++D + E + P A NNLG + ++ LD A+ Y+ A++
Sbjct: 41 MHFLGLLACQLKQYDAGLALMERSLAARPD-ASYFNNLGNMLRECGRLDDAIAHYRRAVA 99
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P++ ++ NNLG A + +AI P YAEAYNNLG + +D G + A
Sbjct: 100 LRPDYPEAHNNLGNALRDARDPAEAMQSCSRAIELRPGYAEAYNNLGNVLQDLGELDAAA 159
Query: 121 DAYEQCLKIDPDSRNAGQN 139
+Y + + P A N
Sbjct: 160 ASYGKAIAFHPAYAEAHSN 178
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
+A+ E + A Y+ H P +A + LG++ D + + +L+ +P+
Sbjct: 12 LAHHEAGRLVEAKALYDAILHAQPGQPDAMHFLGLLACQLKQYDAGLALMERSLAARPDA 71
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
S NNLG + G++D A +A+A P Y EA+NNLG RDA + A+ + +
Sbjct: 72 SY-FNNLGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMQSCSR 130
Query: 126 CLKIDP 131
+++ P
Sbjct: 131 AIELRP 136
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A+ A P AEA NNLG + +D LD A Y A++
Sbjct: 110 NLGNALRDARDPAEAMQSCSRAIELRPGYAEAYNNLGNVLQDLGELDAAAASYGKAIAFH 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P ++++ +NLG V Q + A +AI +P A + LG+ G +S A+
Sbjct: 170 PAYAEAHSNLGNVLRAQDRHADAIVHYRRAIELSPALPAACHGLGLSLWALGELSEAV 227
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ + D A Y A F+P AEA +NLG + + +D A+ Y+ A+ +
Sbjct: 144 NLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHSNLGNVLRAQDRHADAIVHYRRAIELS 203
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI 116
P + + LG+ G++ A ++ A A + + N GVL RD G +
Sbjct: 204 PALPAACHGLGLSLWALGELSEAVSVLGAAAAGSGDASLHNNYAGVL-RDVGDL 256
>gi|402834284|ref|ZP_10882887.1| glycosyltransferase family 41 domain protein [Selenomonas sp. CM52]
gi|402278580|gb|EJU27639.1| glycosyltransferase family 41 domain protein [Selenomonas sp. CM52]
Length = 1683
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 279/540 (51%), Gaps = 29/540 (5%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIA--- 94
L +Y D + + A + L+ K + L V+ + G+ A E +A+A
Sbjct: 608 LAGLYVDAEEGENAARAAGLYLADKADGFGFLLRARAVFLL-GRWRDALEDARRALALGT 666
Query: 95 -ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID---PDSRNAGQNRLLAMNYINEG 150
+ A+N + + R G I A+ A + + D + N L A++Y+ E
Sbjct: 667 LSRGEQVLAHNLVARICRSMGEIEEALCAEKAAFDVADTLEDKAASWSNYLFALHYV-ER 725
Query: 151 HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
L +A R +G+ L+ + W T + +GY+SPD+ H V+ F A +
Sbjct: 726 EPRFLLDAARLYGE----LFKEAPRWKGTPKRREKIRVGYISPDFTFHIVALFSFAFFTH 781
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
D ++V YS A ++ +WR + G ++A +R D+IDIL +
Sbjct: 782 FDKTRFEVFGYSL-----AGENAMAAELSSHASVWRYVDGETPAEIAEKIRADEIDILFD 836
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP-PETKQKHVEELI 329
L+GH+ANN L ++A +PAPVQ++ IGY +TTGL +DY +TD+ DP E E+L+
Sbjct: 837 LSGHSANNALPVLALRPAPVQISGIGYFDTTGLSAVDYFLTDAYTDPMGENDDCFTEKLL 896
Query: 330 RLPECFLCYTPS--PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
RLPE LCY S E + P PA G+ITFGSFNN AK+T +VL +WA+IL VP S
Sbjct: 897 RLPESHLCYRASRAGEKSRIAPLPAREKGYITFGSFNNFAKVTDRVLHLWAKILRTVPRS 956
Query: 388 RLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH--DHMQAYSLMDISLDTF 445
RL +K F R L +E G +DL+ + H +++ AY +DI+LDTF
Sbjct: 957 RLFLKTAAFDAVDGRQEALRRIEAAG-----IDLVRVKTEGHTAEYLAAYGEVDIALDTF 1011
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-KHLIAKNEDEYVQLALQLA 504
PY G TTC++LYMGVP VT+AG H GVS+L +GL A DEYV+ A LA
Sbjct: 1012 PYPGGGTTCDALYMGVPVVTLAGVRHGARFGVSILANLGLVDACCAHTADEYVEKACALA 1071
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQ 564
+DV LA LR +LR M SP+ D + L LE+ Y +W D +++ +L+ +
Sbjct: 1072 ADVQTLAVLRRTLRTRMEASPLMDAARYMLHLEAAYEKIWAHRLGEDEGEVRKALVLKME 1131
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 155/410 (37%), Positives = 228/410 (55%), Gaps = 18/410 (4%)
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLV-IGYVSPD 194
A N L A++++ + ++ AH +G+ L+ T + + P+R + IGY+SPD
Sbjct: 153 AWSNVLFALHFLRVPQQE-VYRAHCAYGE----LFCDVTPFLHRLRPKRRKIRIGYISPD 207
Query: 195 YFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEK 254
H V F EA ++D + ++V Y + ++M+ WR+I + +
Sbjct: 208 LRHHVVLRFAEALFTHYDAERFEVYCYQ-----NGPEDEESRRIMRLVDAWRNISPLSPQ 262
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
+ A + ED ID+LV+L GHT L ++A +PAPVQ++ IGY TTGLPT+DY I D
Sbjct: 263 EAARRIYEDGIDVLVDLAGHTRGTALPVLAHRPAPVQMSGIGYFATTGLPTVDYMIGDVW 322
Query: 315 AD--PPETKQK--HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKIT 370
D P K+ E+L+ L LCYTP+ +A P P + GF+TFGSFN AK +
Sbjct: 323 LDGAPAGIKEAPFFTEKLLVLEHTHLCYTPAADAPPAGTAPCMEKGFVTFGSFNAFAKAS 382
Query: 371 PKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430
+VL VWA+IL AVPNSRL++K F + L L+ G+E RV+L P +
Sbjct: 383 DEVLAVWAQILAAVPNSRLLLKSAAFSSEEGCAAALERLQAAGIEPARVELRPD---TRE 439
Query: 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA 490
++ Y +DI+LD FPY G TT ++LYMGVP VT+ G H G S+L +GL+ L A
Sbjct: 440 YLHEYHDVDIALDPFPYPGGGTTFDALYMGVPVVTLKGDSHGARFGFSILANLGLEDLAA 499
Query: 491 KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+ YV+ A+ LA D LA L +LR +M SP+ DG ++ LE+ Y
Sbjct: 500 ADAASYVETAVALAKDAELLAALHGNLRSMMENSPLMDGASYVAALEAGY 549
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 210/406 (51%), Gaps = 13/406 (3%)
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDY 195
A + LLA++ G + LF AHRD+ + + + R IGY+SPD+
Sbjct: 1276 AYSSHLLALHNTAIGRE-ALFAAHRDYERILEGIEPLAARILQIRSKIR---IGYMSPDF 1331
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H + FI V D +++V YS + D T +E WR++ G +
Sbjct: 1332 RRHVMLSFIYGLFVRFDRTHFEVYAYSLAEEEDGFTAALKEHATA----WREMAGFSYAE 1387
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A +R D+ID+LV+L GH+A L + +PAPVQV+ +GY NTTGL ++DY +TD +
Sbjct: 1388 IAERIRADEIDVLVDLAGHSAGGALPIFCYRPAPVQVSGLGYVNTTGLSSVDYFLTDDIV 1447
Query: 316 DPPETKQKH-VEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVL 374
DPP EE + L FL YT + P G+I FG FN+ K+T ++L
Sbjct: 1448 DPPGRHDAFFTEEPVCLTSQFL-YTAKSDVPNPSSAPCRVKGYIVFGVFNHWYKVTEEML 1506
Query: 375 QVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQA 434
W IL VP SRL++KC+ +R L + + ++ RVDL P D+M+
Sbjct: 1507 FCWREILERVPKSRLLIKCQELFAPEMREEVLRRMAEAKIDIERVDLEPA---TSDYMER 1563
Query: 435 YSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNED 494
Y +DI+LDTFPY G TTC++LYMGVP VT G G+SLL VG+ L A +
Sbjct: 1564 YLAVDIALDTFPYPGGGTTCDALYMGVPVVTRYGRRRGSRFGLSLLKNVGVSDLAAADAR 1623
Query: 495 EYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
Y++ A+ LA D L L +LR ++ SPV ++ LE Y
Sbjct: 1624 SYIEKAVALAHDADLLDQLHRTLRAHLAASPVMQAAHYMEELERFY 1669
>gi|171322912|ref|ZP_02911606.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
gi|171091721|gb|EDT37262.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
Length = 652
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 277/556 (49%), Gaps = 15/556 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL ++ A+V + A P +A N G + +L A CY+ AL +
Sbjct: 98 NLSGVRRRQARYAEALVHAQEAIRIAPDLPDAQNQAGNAHHGLGDLVAAQACYRTALELN 157
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P S + +NL VV + + A +A+A Y NLG + R G++ A+ A
Sbjct: 158 PADSGACHNLSVVLLKRERHAEALAYCRQALAGGHPTVSMYVNLGDILRAQGNVDAAVPA 217
Query: 123 YEQCLKI--DPDSRNAGQ--NRLL--AMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTS- 175
Y L + D S +A + RLL A D L +A R +G+ ++YT
Sbjct: 218 YRDALALVRDDASDDAAEVLGRLLFAAAASATVSPADYLNDARR-YGRHLAARSTRYTHD 276
Query: 176 -WDNTKDP-ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
+ D RPL +G+VS D H V F+E+ + D VY+ +ADA T R
Sbjct: 277 VRERAADALHRPLRVGFVSGDLRQHPVGIFVESVFAHLDRTRIAPCVYTTSDEADAITAR 336
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
+ +WR I G D + A + +D ID+LV+L GHT + L +PAPVQ +
Sbjct: 337 LK----PHAAVWRSIAGCDPQAAARTIHDDGIDVLVDLAGHTQASGLAAFGWKPAPVQAS 392
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL 353
W+G+ +TG IDY I D+ P + VE+ +LP+ +LC+TP + V P P
Sbjct: 393 WLGFFASTGSDAIDYFIGDAQTLPADEAYHFVEQPWQLPDSYLCFTPPSDDVAVGPLPMA 452
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
NG +TFG F L K+ V++VW+R+L A+P +RL++K + +VR + + G
Sbjct: 453 ANGHVTFGCFGKLVKLGDDVVRVWSRVLDALPGARLLLKARELEQAAVRDATAARFARHG 512
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+++ R+ L D+ AY+ +D++L FPY G TTT E+L+MGVP + M G
Sbjct: 513 IDASRL-LFDGASPRADYFAAYNRIDVALSPFPYPGGTTTAEALWMGVPVLGMKGGRFVT 571
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
++ SLL G+ IA +ED+YV A+ A D LA LR +LR+ SP+CD FA
Sbjct: 572 HICESLLHAAGMPDWIAGDEDDYVAKAVAAAQDGARLAALRATLRERTLASPLCDAARFA 631
Query: 534 LGLESTYRNMWHRYCK 549
LE + MW RY +
Sbjct: 632 RNLEDAFVGMWTRYTE 647
>gi|302878311|ref|YP_003846875.1| hypothetical protein Galf_1081 [Gallionella capsiferriformans ES-2]
gi|302581100|gb|ADL55111.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 961
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 276/548 (50%), Gaps = 8/548 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ E+ + A + A F+P EA NLG + L +A CY+ L +
Sbjct: 413 NLGIVQQELGRLTDAEASFRQALQFSPDLLEAHCNLGNVLLGAARLSEAESCYRHVLLLN 472
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + + LG+ G++ + P A AYN+LG RD+G A+
Sbjct: 473 PDHAIAHRLLGLTLMSMGRLHEGVASFRDVVHLRPNEASAYNDLGNGLRDSGLHDQAVQC 532
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
Y + L++DP + + A++ + + + + + W + Q S+D T DP
Sbjct: 533 YRRALELDPRDAAVHSDLIFALDLVADLSVSAMQDERKKWCQMHAAHLRQRISYDTTPDP 592
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK--TIRFREKVMK 240
+R L IGYVS D+ ++S F L D+ ++V Y+ + + T RF++ V
Sbjct: 593 DRRLRIGYVSSDFSSNSAPAFFGGMLFNFDHSRFEVFTYANESRTISTPLTRRFQQSVT- 651
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+WR+I+ + + VA ++R DKIDILV+L+GH+ N+L + A +PAPVQ++ Y
Sbjct: 652 ---VWRNIFRMSDDAVADLIRADKIDILVDLSGHSGRNRLLVFARKPAPVQISAWAYATG 708
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TG+ +D +D P E + + E + LP F Y P E V PALT ITF
Sbjct: 709 TGMDAMDVLFSDITLIPSEERFLYAEAIRYLP-AFFSYFPCQEPPAVALLPALTKKTITF 767
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G+F+ L K+T + Q WA ++ +VP+S +++K R R ++ G+ R+
Sbjct: 768 GTFSRLEKVTEQTWQTWADVVLSVPDSCMLIKNAEMDHAVARARVAGYFQRAGVALDRLI 827
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
N DHM ++ +DI LDTFP G TT E L MGVP +T+ GVS+L
Sbjct: 828 FHGRTAWN-DHMAVFNQVDICLDTFPQGGGVTTLEGLMMGVPVITLHSPTFVGRTGVSIL 886
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T +GL +A+ ++YV++A Q A D+ ALA LR LR ++ S + + ++ +E Y
Sbjct: 887 TALGLVDWVAETPEQYVKIAKQKAQDIPALAQLRAQLRTRLTSSIIGNPVAYSKLVEQEY 946
Query: 541 RNMWHRYC 548
+W +C
Sbjct: 947 LALWQAWC 954
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ Y ++ + D A Y A NPH AEA +NLGVI + + ++A +CY+ AL I
Sbjct: 208 YNLGITYQDLGRLDEACHCYRQAVQINPHYAEAHSNLGVILQGLGDREEAEQCYRRALQI 267
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP + +L+NL + + G++D AA + ++P A+ NL + + G ++ A
Sbjct: 268 KPGYGAALSNLANLLQMLGRLDEAAACCRTILKSSPDSADVLFNLANILKRLGQLAEAEA 327
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYIN--EGHDDKLFEAHR---DWGKRFMRLYSQYTSW 176
+Y L+ +PDS N + + + E + +A R D+ + L +
Sbjct: 328 SYRVALRFNPDSVQIHGNLGITLKELGRFEEAESSFRQALRINPDYAQAHCNLGVMFKEL 387
Query: 177 DNTKDPERPLVIGY-VSPDY 195
D + ER + ++PDY
Sbjct: 388 DRLDEAERCYLTALQLAPDY 407
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 2/159 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ E+ +F+ A + A NP A+A NLGV++K+ D LD+A CY AL +
Sbjct: 345 NLGITLKELGRFEEAESSFRQALRINPDYAQAHCNLGVMFKELDRLDEAERCYLTALQLA 404
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + +NLG+V G++ A +A+ +P EA+ NLG + A +S A
Sbjct: 405 PDYADAHSNLGIVQQELGRLTDAEASFRQALQFSPDLLEAHCNLGNVLLGAARLSEAESC 464
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
Y L ++PD +A +RLL + ++ G + + RD
Sbjct: 465 YRHVLLLNPD--HAIAHRLLGLTLMSMGRLHEGVASFRD 501
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 71/132 (53%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++NL + + A Y +A FNP + NLG+ K+ ++A ++ AL
Sbjct: 309 LFNLANILKRLGQLAEAEASYRVALRFNPDSVQIHGNLGITLKELGRFEEAESSFRQALR 368
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P+++Q+ NLGV++ ++D A A+ P YA+A++NLG++ ++ G ++ A
Sbjct: 369 INPDYAQAHCNLGVMFKELDRLDEAERCYLTALQLAPDYADAHSNLGIVQQELGRLTDAE 428
Query: 121 DAYEQCLKIDPD 132
++ Q L+ PD
Sbjct: 429 ASFRQALQFSPD 440
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y + + A+V E A +P EA NLG+ Y+D LD+A CY+ A+ I P
Sbjct: 176 LGAVYQQHGNIEAALVPMETAASLSPGDVEAHYNLGITYQDLGRLDEACHCYRQAVQINP 235
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++++ +NLGV+ G + A + +A+ P Y A +NL L + G + A
Sbjct: 236 HYAEAHSNLGVILQGLGDREEAEQCYRRALQIKPGYGAALSNLANLLQMLGRLDEAAACC 295
Query: 124 EQCLKIDPDS 133
LK PDS
Sbjct: 296 RTILKSSPDS 305
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
+P A+ NL I K L +A Y++AL P+ Q NLG+ G+ + A
Sbjct: 302 SPDSADVLFNLANILKRLGQLAEAEASYRVALRFNPDSVQIHGNLGITLKELGRFEEAES 361
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+A+ NP YA+A+ NLGV++++ + A Y L++ PD +A N
Sbjct: 362 SFRQALRINPDYAQAHCNLGVMFKELDRLDEAERCYLTALQLAPDYADAHSN 413
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 72 LGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
LG VY G ++AA +E A + +P EA+ NLG+ Y+D G + A Y Q ++I+P
Sbjct: 176 LGAVYQQHGNIEAALVPMETAASLSPGDVEAHYNLGITYQDLGRLDEACHCYRQAVQINP 235
Query: 132 DSRNAGQNRLLAMNYINEGHDDK 154
A N + I +G D+
Sbjct: 236 HYAEAHSN----LGVILQGLGDR 254
>gi|163857328|ref|YP_001631626.1| hypothetical protein Bpet3016 [Bordetella petrii DSM 12804]
gi|163261056|emb|CAP43358.1| hypothetical protein predicted by Glimmer/Critica [Bordetella
petrii]
Length = 1133
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 283/556 (50%), Gaps = 7/556 (1%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
+E A A + L + ++ D A++ + AL P S ++ +
Sbjct: 80 FEHAISLQEKLPGAHHGLAAVLLRLNDCDGALKHIERALEYSPGQSAIKAQKSIILSRNY 139
Query: 81 KMDAAAEMIEKAIAANPTYAEA-YNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ + A ++++ + +P A A + NLG + RD G + A +Y Q +++ P S A N
Sbjct: 140 RYEEAGALLKELLEEDPKNAFAHWTNLGNIQRDLGKLEHAEASYRQAVELQPASPIALSN 199
Query: 140 RLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHS 199
RL ++Y+ E + +A +WG F + + + L +G S + H
Sbjct: 200 RLTLLHYMPERTLADIKQACMEWGSLFAKSDAGRRPRPANMSASKKLRVGMFSDGFRQHP 259
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
V L + ++ Y+ AD T +++ K W+ I ++E++ A
Sbjct: 260 VGAMTTTVLEHLVNLGIEIYAYTTTPTADYIT----QRIKKVSARWQSIGTLNEEQFAQR 315
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG-YPNTTGLPTIDYRITDSLADPP 318
+R+D+IDIL++L GH+A +++ MA +PAP+ V W+G NTTG+ +IDY ITDS+ PP
Sbjct: 316 IRDDQIDILIDLAGHSAGSRMRTMALEPAPILVKWVGGLINTTGVESIDYLITDSIESPP 375
Query: 319 ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWA 378
++ + E+LIR+P+ ++CY P V P PAL NG+ITFG FNN K+ VL WA
Sbjct: 376 DSDGLYTEKLIRMPDDYICYMPPARVPDVGPLPALKNGYITFGCFNNPTKVNDLVLAQWA 435
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
R++ AVP SRL +K P+ +R +E+ G+ R+ L++ + Y+ +
Sbjct: 436 RLMQAVPGSRLYLKGGPYESADLRTHIGEVMERHGITVDRIRFEGQS-LHYKLFKCYNDV 494
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D++LD +PY+G TTCE++ MGVP V++ G A + L G+ L+ + D Y
Sbjct: 495 DVALDPWPYSGGLTTCEAMLMGVPVVSLPGPTFAGRHSATHLINAGMPELVVADWDAYHA 554
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
AL+L SD+ +LA +R LR ++ KS VCD FA L R +W R+C P+
Sbjct: 555 RALELVSDLDSLAAIRAHLRTVLLKSSVCDAPKFASHLADALRAIWQRFCANKAPAALAF 614
Query: 559 EMLQQQVVSEEPSKFS 574
Q +EP+ +
Sbjct: 615 TPEGQPWFEDEPAPMT 630
>gi|288963191|ref|YP_003453470.1| TPR repeat-containing protein [Azospirillum sp. B510]
gi|288915443|dbj|BAI76926.1| TPR repeat-containing protein [Azospirillum sp. B510]
Length = 1246
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 262/486 (53%), Gaps = 8/486 (1%)
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ +L ++G ++ ++G++ A + +A+A +P + NL + G + A A
Sbjct: 135 LASALADMGALWHLRGQLHRAMCWMRRALALSPGDTRIWGNLAASLKVQGLLDDAERACR 194
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFM-RLYSQYTSWDNTKDPE 183
L +DP + + N L + + + + LFEAH WG+ + + + ++ P
Sbjct: 195 HSLALDPLNDSTHVNLLQTLEHQPDLSETALFEAHAAWGRLYQAQAAGRLPPPGISRIPG 254
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
R L IGYV+ ++ F+ L + D + ++ + YSA + R+ +
Sbjct: 255 RRLRIGYVALNFAGGPRRLFLTHLLEHRDREAFETICYSADPAEASPPPPLRDAAEQ--- 311
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
WR G+ ++ + A++R D+IDILV+L GH+ N+L A +PAPVQV+WIGY +TTGL
Sbjct: 312 -WRTTAGLSDEALVALIRADEIDILVDLDGHSNGNRLRAFALKPAPVQVSWIGYFHTTGL 370
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
P +D D+ P + + VE +IRLP CY AG V P P++ G +TFGSF
Sbjct: 371 PAMDAIFMDAAMVRPGEEGRFVERVIRLPYSRFCYKAPDCAGAVAPPPSVRRGAVTFGSF 430
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N +AK+ P+V++VW+R+L AVP SRL++K V HR G+ R++L
Sbjct: 431 NLIAKLNPRVIRVWSRVLQAVPASRLLLKSINLSDPVVCHRLEEAFAVHGIGRDRLELRG 490
Query: 424 LILLNHDHM-QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+H M + Y +DI+LD FP+ G T+CE+L+MG+P VTM G LL
Sbjct: 491 PS--SHAAMFEEYGDVDIALDPFPFTGGITSCEALWMGLPIVTMPGERPVSRQTAGLLDI 548
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+GL LIA++EDEYV++A LASD L LR LR M+ SP+CD +E+TYR
Sbjct: 549 LGLNGLIARDEDEYVRIAAALASDSERLLALRTGLRPRMAASPLCDSAGMIGRVEATYRM 608
Query: 543 MWHRYC 548
+W C
Sbjct: 609 LWQDRC 614
>gi|381160366|ref|ZP_09869598.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
gi|380878430|gb|EIC20522.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
Length = 731
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 261/503 (51%), Gaps = 12/503 (2%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK-----MDAAAEMIEKAIAANPTYAE 101
L +AV+ ++ AL + P+F+++ + G G+ A + A+A YAE
Sbjct: 228 RLHEAVDAFETALKLAPDFAEAHFHRGSALQSLGRKSLGPFTKALAAYDAALAVRADYAE 287
Query: 102 AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
A +N +D + AI Y + ++P+ NRLLA++Y + A R
Sbjct: 288 ALHNRATTLQDLERLDEAIAGYTHAISVNPNYLATHSNRLLALHYRENSARGPILSAARQ 347
Query: 162 WGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY 221
+G+RF +S + RPL IGYVS D+ H V +F+E L HD + +V+ +
Sbjct: 348 FGERFGH-HSPRNARAKPHPKRRPLCIGYVSGDFRRHPVGHFLEPLLPNHDRKEVRVICF 406
Query: 222 SAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLG 281
D+ + ++ W + G+D++ A +R IDIL++L+GHTA+N+L
Sbjct: 407 PTSTVYDSVSA----ELQSHADGWHSLVGLDDETAADCIRAQSIDILLDLSGHTADNRLS 462
Query: 282 MMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPS 341
M A +PAPVQ +W+GY TTGL +DY + D P + K +E+L RLP ++C P
Sbjct: 463 MFALKPAPVQASWLGYVGTTGLSAMDYVLADRFVAPEQDKDLFIEQLWRLPHSYMCIRPP 522
Query: 342 PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
A P+ A +TFGSFNN K++P + +W+ IL PN+RL+++ +
Sbjct: 523 EPAVPIRKRNANPRE-LTFGSFNNTIKLSPATIALWSHILRETPNTRLLLRYASLRHAEI 581
Query: 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
R + L G+ + R+ L + ++ Y+ +DI+LD PY G TT E+L+MGV
Sbjct: 582 RRQLLERFAAHGISAERLTLEGKASRT-EMLETYNRVDIALDPTPYGGGITTAEALWMGV 640
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P +T+ G S+L +G L+AKNE+EYV LA+ LA+ +LR +
Sbjct: 641 PVITLHGGAWPGRHSASILNTIGCPGLVAKNEEEYVALAISLATAPQRRRQYHETLRSTV 700
Query: 522 SKSPVCDGQNFALGLESTYRNMW 544
+SP+CDG FA +E+ +R MW
Sbjct: 701 EQSPLCDGLTFARDVETAFRGMW 723
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+G+ + + +F AI Y+ A + P+ E N G AV + AL+ +
Sbjct: 116 NIGIIFDRLKRFSEAIHAYDRALRYRPNHPETHFNRGRALMQCGRERDAVSAFDAALACR 175
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+++++ + G+ + + A + A++ AE++ G G + A+DA
Sbjct: 176 EDYAKAYHCRGLCLDALKRPEDALAAFDAALSVQGNLAESHFFRGTTLLQLGRLHEAVDA 235
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE 149
+E LK+ PD A +R A+ +
Sbjct: 236 FETALKLAPDFAEAHFHRGSALQSLGR 262
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 60/142 (42%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+ + Y + + + AI+ Y+ +P A+A L + + A A+S+
Sbjct: 14 DTAIQYHQRGEIEGAILLYQQFLRVHPRHADAWYLLSLAAYQAEQYSDAENAISEAISLN 73
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + G + GK++ A A T A+ Y N+G+++ S AI A
Sbjct: 74 PTDASYHAHAGELLKSMGKLEEALANYRTAAGLAQTDADLYLNIGIIFDRLKRFSEAIHA 133
Query: 123 YEQCLKIDPDSRNAGQNRLLAM 144
Y++ L+ P+ NR A+
Sbjct: 134 YDRALRYRPNHPETHFNRGRAL 155
>gi|420246617|ref|ZP_14750053.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderia sp. BT03]
gi|398073902|gb|EJL65061.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderia sp. BT03]
Length = 607
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 271/511 (53%), Gaps = 9/511 (1%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
N+LG + + A ECY++ ++ +P+ + N LG Q + A E +AIA
Sbjct: 91 NDLGDVMTAHNRPAAAAECYRLVIAAQPDNVDAYNKLGRALRAQRQSAEAIEAFCQAIAL 150
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
P +A AYNNL +AG + A++AY + + PD N L A+NY + +
Sbjct: 151 KPDHAAAYNNLANALVEAGELQAAVEAYRIAINLRPDCAEPRSNLLFALNYTPDVSPETY 210
Query: 156 FEAHRDWGKRFMRLYSQYTSWDNTKD--PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
R + + YTSW ++D RPL IG VS D H V YF+++ L D
Sbjct: 211 LSEARRFEEALYASVLPYTSWPASRDRGQSRPLRIGIVSGDLKRHPVGYFLDSVLANIDR 270
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ V Y V D T + + ++ W + + +++ A +R+D +D+L++ +G
Sbjct: 271 SRIEFVAYPTRVIEDDLTRIIKRRFVQ----WTSLAAMSDEEAARRIRDDGVDVLIDASG 326
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH-VEELIRLP 332
HTA+N+LG+ A + APVQ +WIGY +TGL IDY + D+ PET++ H VE RL
Sbjct: 327 HTAHNRLGVFARKAAPVQASWIGYFASTGLRAIDYILCDAQV-LPETEEAHFVERPWRLQ 385
Query: 333 ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
+ +LC+TP E V P+P LT G +TFG F L K+T +V+ VW+ L +VP SRL +K
Sbjct: 386 DSYLCFTPPQEPVEVGPSPHLTQGAVTFGYFGKLGKMTDEVVAVWSHALLSVPGSRLFLK 445
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
+ D ++ G++ R+ LL +++ AY +D+ L FPY G TT
Sbjct: 446 ARELDGDYAMREAVTRFAAHGIDGSRL-LLEGGSPRAEYLAAYHRVDVMLSPFPYPGGTT 504
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
T E+L+MG+P + M G +V S+L GL IA++ D+YV A+ A+D L
Sbjct: 505 TAEALWMGIPVLAMKGDRFLTHVCESMLHAAGLADWIAQDADDYVAKAVASANDTAKLGA 564
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
+R +LR+ + SP+CD FA LE+ + M
Sbjct: 565 IRAALRNQLLASPLCDAPRFARNLEAAFEAM 595
>gi|292669308|ref|ZP_06602734.1| TPR domain/SEC-C domain protein domain-containing protein
[Selenomonas noxia ATCC 43541]
gi|292649149|gb|EFF67121.1| TPR domain/SEC-C domain protein domain-containing protein
[Selenomonas noxia ATCC 43541]
Length = 596
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/458 (37%), Positives = 249/458 (54%), Gaps = 19/458 (4%)
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG---QNRLLAMNYINEGHDDKLF 156
A AY+ LG AG++ A+ A+ +++ + N L A NY+ H
Sbjct: 151 ASAYSLLGAALSRAGAVEDAVAAFLSSSQLETEREKKAVEYSNALFAANYL-PAHRRA-- 207
Query: 157 EAHRDWGKRFMRLYSQYTSWDNTKDPER---PLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
A+ + + LY+ + +D R + IGY+SPD TH V+ ++ L + D
Sbjct: 208 -AYAGLARGYAALYADVLPLSSPEDVVRGHDRIRIGYISPDLRTHPVATLLQPLLQFFDR 266
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ V Y A AD + R R WR+I G+ ++ AA+VR D+IDILV+L G
Sbjct: 267 TAFSVYCY-ANCAADETSRRLR----AAADAWRNIRGMTAEEAAALVRRDEIDILVDLAG 321
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP-ETKQKHVEELIRLP 332
HT +N L ++A +PAPVQVT IGY NTTGLP +DY ++D DP + EE+IRLP
Sbjct: 322 HTQDNCLPVLAHKPAPVQVTGIGYFNTTGLPAVDYMLSDVYVDPAGAADESFTEEIIRLP 381
Query: 333 ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
CYT + V P P G TFGSFNN +K T +VL +W R+L AVP +RL+VK
Sbjct: 382 HSHFCYTLRADLPDVAPLPMERRGCATFGSFNNFSKATDEVLALWQRVLDAVPGARLLVK 441
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
K F DS R ++ E+ + ++ + + H+ Y+ +DI+LDTFPY G T
Sbjct: 442 SKLF--DSAEGREIAA-ERFARAGIPMERTEMRGFSRAHLSEYADVDIALDTFPYTGGIT 498
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
TCE+L MGVP VT+ G+ H G SLL L LIA + ++YV++A LAS L
Sbjct: 499 TCEALAMGVPVVTLRGTSHGACFGESLLANANLPELIAASPEDYVRIAAALASAPDTLRI 558
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
LR +LR ++ ++P+ D + + +E YR +W R+ +
Sbjct: 559 LRRNLRAILGRAPLTDARGYVRDVEHAYREIWERFARA 596
>gi|67640477|ref|ZP_00439282.1| TPR domain protein [Burkholderia mallei GB8 horse 4]
gi|121600690|ref|YP_994729.1| hypothetical protein BMASAVP1_A3451 [Burkholderia mallei SAVP1]
gi|124383342|ref|YP_001027648.1| hypothetical protein BMA10229_A1668 [Burkholderia mallei NCTC
10229]
gi|126449970|ref|YP_001082618.1| hypothetical protein BMA10247_3099 [Burkholderia mallei NCTC 10247]
gi|167000422|ref|ZP_02266236.1| TPR domain protein [Burkholderia mallei PRL-20]
gi|254174654|ref|ZP_04881315.1| TPR domain protein [Burkholderia mallei ATCC 10399]
gi|254201458|ref|ZP_04907822.1| TPR domain protein [Burkholderia mallei FMH]
gi|254206800|ref|ZP_04913151.1| TPR domain protein [Burkholderia mallei JHU]
gi|254357176|ref|ZP_04973450.1| TPR domain protein [Burkholderia mallei 2002721280]
gi|121229500|gb|ABM52018.1| TPR domain protein [Burkholderia mallei SAVP1]
gi|124291362|gb|ABN00631.1| TPR domain protein [Burkholderia mallei NCTC 10229]
gi|126242840|gb|ABO05933.1| TPR domain protein [Burkholderia mallei NCTC 10247]
gi|147747352|gb|EDK54428.1| TPR domain protein [Burkholderia mallei FMH]
gi|147752342|gb|EDK59408.1| TPR domain protein [Burkholderia mallei JHU]
gi|148026240|gb|EDK84325.1| TPR domain protein [Burkholderia mallei 2002721280]
gi|160695699|gb|EDP85669.1| TPR domain protein [Burkholderia mallei ATCC 10399]
gi|238521193|gb|EEP84646.1| TPR domain protein [Burkholderia mallei GB8 horse 4]
gi|243063614|gb|EES45800.1| TPR domain protein [Burkholderia mallei PRL-20]
Length = 776
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + ++DP A N L
Sbjct: 294 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELDPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDALAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 645
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 646 LDTFPYTGSTTALNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 705
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 706 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 758
>gi|53724345|ref|YP_104386.1| hypothetical protein BMA2876 [Burkholderia mallei ATCC 23344]
gi|52427768|gb|AAU48361.1| TPR domain protein [Burkholderia mallei ATCC 23344]
Length = 821
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 283 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 338
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + ++DP A N L
Sbjct: 339 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELDPKDPMAYSNLLFCQ 398
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 399 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 458
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 459 L-LPLVDALAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 513
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 514 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 573
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 574 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 633
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 634 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 690
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 691 LDTFPYTGSTTALNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 750
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 751 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 803
>gi|91785677|ref|YP_560883.1| TPR domain-containing protein [Burkholderia xenovorans LB400]
gi|91689631|gb|ABE32831.1| putative TPR domain protein [Burkholderia xenovorans LB400]
Length = 790
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 289/558 (51%), Gaps = 25/558 (4%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRD-NLDKAVECYQMALSIK 62
LG+A + ++D A+V A P E+ L + + + + EC + L+I
Sbjct: 219 LGIALHRLGRYDEALVPLRKAAELVPEELESRTVLADTLRLKGLHAETEQEC-RAVLAIN 277
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ G+ QG++ + +A+ P A Y+ LGVL D G ++ A
Sbjct: 278 PDYAEAQRIFGMSLVHQGRVAEGLAAVRRAVELAPNNASMYSTLGVLLLDLGFVAEAEKE 337
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKD 181
+ L+ DP A N L + + E LF H ++ ++ + +Q+ N +
Sbjct: 338 FRTALEKDPKDHIAANNFLFTLWHNPETDHATLFAEHTNFARQHEDPVRAQWPRHVNKRS 397
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQN--YKVVVYSAVVKADAKTIRFREKVM 239
P+R L IG VS D F H+V+ ++ P++ H ++ + VYS + D T R+
Sbjct: 398 PDRKLKIGLVSGDLFRHAVASYL-LPIMEHLAKDPSLSLHVYSNHIAEDDYTQMLRDCAD 456
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ W+ I G+ + ++A+ +R+++IDIL +L+GHT N+L A +PAP+QVTW+GYP
Sbjct: 457 E----WQQITGMPDAQLASKIRDERIDILFDLSGHTGRNRLLTFARKPAPIQVTWLGYPG 512
Query: 300 TTGLPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGL +DY + D P +K E+++ LP + P A PV PA+ NG+I
Sbjct: 513 TTGLSAMDYYLVDKYGVPFGPAEKLFSEKIVHLPSS-ATFLPEKSAPPVNILPAMHNGYI 571
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGSFN L K+ V+ +WA +L A P +R+++ D + G+E R
Sbjct: 572 TFGSFNRLNKLRRDVIALWAELLRAQPTARMLLGA--IATDEDEQLLIDWFAGEGIERGR 629
Query: 419 V-----DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ +P+ L H H +DI LDTFPY G+TT SL+MGVP +T+AG A
Sbjct: 630 LMFRRRSSIPVYLQQHFH------VDICLDTFPYTGSTTVLNSLWMGVPTLTIAGDTLAS 683
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
G + ++ VGL+ +A N++E+V + LASD+ ALA +R LR+ + S + A
Sbjct: 684 RAGTTWMSHVGLEEFVAANKEEFVARGVALASDIPALAAIRTGLRERCAASAAFHPEVVA 743
Query: 534 LGLESTYRNMWHRYCKGD 551
G+ R MW R+C G+
Sbjct: 744 AGVSRALRIMWQRWCAGE 761
>gi|304436410|ref|ZP_07396385.1| TPR domain/SEC-C domain protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370574|gb|EFM24224.1| TPR domain/SEC-C domain protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 594
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/388 (40%), Positives = 228/388 (58%), Gaps = 18/388 (4%)
Query: 173 YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTI 232
YT + +R L IGY+SPD+ H+VSYFI L + D +++ V Y A+ ++DA T
Sbjct: 210 YTHAHIARSSQRKLRIGYISPDFREHAVSYFIPPLLRHFDGEHFMVFCY-ALGRSDAVTE 268
Query: 233 RFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
RFR + + WRD+ G + A ++ EDKIDILV+L+GH+ +N L +MA +PAPVQV
Sbjct: 269 RFRTRRV----TWRDLRGRPPRTAARLIAEDKIDILVDLSGHSQDNALPIMAYRPAPVQV 324
Query: 293 TWIGYPNTTGLPTIDYRITDSLADPPE---TKQKHVEELIRLPECFLCYTPS-----PEA 344
+ IGY NTTGL T+DY ++D + P ++ E+++RLP LCY P PEA
Sbjct: 325 SGIGYTNTTGLHTVDYFLSDEVCIPKGDTLAEKGFTEKILRLPHSHLCYMPDVIRAMPEA 384
Query: 345 GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR 404
P NG++TFGSFNN AK+T ++L +W IL V NSRL++K K D+
Sbjct: 385 E--YEAPVRKNGYVTFGSFNNFAKVTDEMLLLWRGILETVNNSRLIIKGKIASIDAGLQF 442
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
L L + R++ P + D+++ Y +DI+LDT PY G TTCE+LYMGVP +
Sbjct: 443 AKKRLALLNFDLDRIEFRPF---SPDYLEQYRDIDIALDTAPYNGGLTTCEALYMGVPVI 499
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
+M G H G S+LT G++ LIA+N+ YV+ A+QLA +A LR M ++
Sbjct: 500 SMRGRTHGARFGASILTNAGVRELIAENDINYVRRAVQLAESPKLIAGYHAGLRANMKQA 559
Query: 525 PVCDGQNFALGLESTYRNMWHRYCKGDV 552
P+ + Q + GLE+ YR +W + +
Sbjct: 560 PLMNAQEYMHGLETAYREIWDTFLHARI 587
>gi|418394627|ref|ZP_12968742.1| TPR domain-containing protein [Burkholderia pseudomallei 354a]
gi|418554742|ref|ZP_13119513.1| TPR domain-containing protein [Burkholderia pseudomallei 354e]
gi|385369925|gb|EIF75216.1| TPR domain-containing protein [Burkholderia pseudomallei 354e]
gi|385374781|gb|EIF79601.1| TPR domain-containing protein [Burkholderia pseudomallei 354a]
Length = 776
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 294 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARARLSFQPRS-VTAVYLQQHHHVDVC 645
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 646 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 705
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 706 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 758
>gi|357057636|ref|ZP_09118494.1| hypothetical protein HMPREF9334_00211 [Selenomonas infelix ATCC
43532]
gi|355374884|gb|EHG22175.1| hypothetical protein HMPREF9334_00211 [Selenomonas infelix ATCC
43532]
Length = 594
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/418 (39%), Positives = 241/418 (57%), Gaps = 23/418 (5%)
Query: 141 LLAMNYINEG-HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHS 199
L NY + G D +L H D R + + S Y + ++ ++ L +GY+SPD+ HS
Sbjct: 186 LFMRNYRHLGAKDGRLKAEHYD---RLLDV-SPYVHGNVSRSAQKKLRVGYISPDFREHS 241
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
VSYF+ L + D + + V Y A ++DA T R R + + WRD+ G + A +
Sbjct: 242 VSYFLTPLLRHFDGEQFMVFCY-ATGRSDAVTERLRTRRV----TWRDLRGRPPRTAARL 296
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP- 318
+ EDKIDILV+L+GH+ +N L +MA +PAPVQ++ IGY NTTGL IDY ++D + P
Sbjct: 297 IAEDKIDILVDLSGHSQDNALPIMAYRPAPVQISGIGYTNTTGLHAIDYFLSDEICIPKG 356
Query: 319 --ETKQKHVEELIRLPECFLCYTPS-----PEAGPVCPTPALTNGFITFGSFNNLAKITP 371
+ + E ++RLP LCY P PEAG P NG++TFGSFNN AK+T
Sbjct: 357 DIQAEAGFTERILRLPHSHLCYAPEAIRAMPEAG--YEPPLRKNGYVTFGSFNNFAKVTD 414
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
++L +W IL +V SRLV+K K DS + L L + RV+ P + D+
Sbjct: 415 EILLLWRGILESVRGSRLVIKGKICSIDSGINFVKKRLSMLNYDLTRVEFRPY---SPDY 471
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
++ Y +DI+LDT PY G TTCE+LYMGVP +++ G H G S+LT G++ L+A+
Sbjct: 472 LEQYRNIDIALDTAPYNGGLTTCEALYMGVPVISLRGRTHGSRFGASILTNAGVRELVAE 531
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
N+ YV+ A+QLA L M LR M +SP+ + +N+ LE+ Y+ +W +CK
Sbjct: 532 NDINYVRRAVQLAESPKLLEAYHMGLRANMKRSPLMNVENYMEELETAYQEIWEDFCK 589
>gi|422344223|ref|ZP_16425149.1| hypothetical protein HMPREF9432_01209 [Selenomonas noxia F0398]
gi|355377542|gb|EHG24759.1| hypothetical protein HMPREF9432_01209 [Selenomonas noxia F0398]
Length = 570
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/458 (36%), Positives = 249/458 (54%), Gaps = 19/458 (4%)
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG---QNRLLAMNYINEGHDDKLF 156
A AY+ LG AG++ A+ A+ +++ + N L A NY+ H
Sbjct: 125 ASAYSLLGAALSRAGAVEDAVAAFLSSSQLETEREKKAVEYSNALFAANYL-PAHRRA-- 181
Query: 157 EAHRDWGKRFMRLYSQYTSWDNTKDPER---PLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
A+ + + LY+ + +D R ++IGY+SPD TH V+ ++ L + D+
Sbjct: 182 -AYAGLARGYAALYADVLPLSSPEDAVRGHDRILIGYISPDLRTHPVAMLLQPLLQFFDH 240
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ V Y A AD + R R WR+I G+ ++ AA+VR D+IDILV+L G
Sbjct: 241 TAFSVYCY-ANCAADETSRRLR----AAADAWRNIRGMTAEEAAALVRRDEIDILVDLAG 295
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP-ETKQKHVEELIRLP 332
HT +N L ++A +PAPVQVT IGY NTTGLP +DY ++D DP + EE+I LP
Sbjct: 296 HTQDNCLPVLAHKPAPVQVTGIGYFNTTGLPAVDYMLSDVYVDPAGAADESFTEEIICLP 355
Query: 333 ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
CYT + V P P TFGSFNN +K T +VL +W R+L AVP +RL+VK
Sbjct: 356 HSHFCYTLRADLPDVAPLPMERRSCATFGSFNNFSKATDEVLALWQRVLEAVPGARLLVK 415
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
K F DS R ++ E+ + ++ + + H+ Y+ +DI+LDTFPY G T
Sbjct: 416 SKLF--DSAEGREIAA-ERFARAGIPMERTEMRGFSRAHLAEYADVDIALDTFPYTGGIT 472
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
TCE+L MGVP VT+ G+ H G SLL L LIA + ++YV++A LAS L
Sbjct: 473 TCEALAMGVPVVTLRGTSHGARFGESLLANANLPELIAASSEDYVRIAAALASAPDTLRI 532
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
LR +LR ++ ++P+ D + + +E YR +W R+ +
Sbjct: 533 LRRNLRAILGRAPLTDARGYVRDVEHAYREIWERFARA 570
>gi|429736240|ref|ZP_19270155.1| hypothetical protein HMPREF9163_01012 [Selenomonas sp. oral taxon
138 str. F0429]
gi|429155838|gb|EKX98487.1| hypothetical protein HMPREF9163_01012 [Selenomonas sp. oral taxon
138 str. F0429]
Length = 587
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 154/389 (39%), Positives = 231/389 (59%), Gaps = 27/389 (6%)
Query: 177 DN-TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR 235
DN + +R L IGY+SPD+ H+VSYF+ L + D + + V Y A ++DA T RFR
Sbjct: 213 DNIVRSSQRKLRIGYISPDFREHAVSYFLTPLLRHFDGEQFMVFCY-ATGRSDAVTERFR 271
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
+ + WRD+ G + A ++ EDKID+LV+L+GH+ +N L +MA +PAPVQ++ I
Sbjct: 272 TRRV----TWRDLRGRQPRTAARLIAEDKIDVLVDLSGHSQDNALPIMAFRPAPVQISGI 327
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKHV---EELIRLPECFLCYTPS-----PEAGPV 347
GY NTTGL IDY ++D + P + V E+++R+P LCY P PEAG
Sbjct: 328 GYTNTTGLHVIDYFLSDEICIPKGDRAAEVGFTEQILRMPHSHLCYAPEEIRAMPEAG-- 385
Query: 348 CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS----VRH 403
TP NG++TFGSFNN AK+T ++L +W IL +V S+L++K K D+ +H
Sbjct: 386 YETPVRRNGYVTFGSFNNFAKVTDEILLLWRGILESVKGSKLIIKGKIASIDAGLNFAKH 445
Query: 404 RFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC 463
R L L + RV+ P + D+++ Y +DI+LDT PY G TTCE+LYMGVP
Sbjct: 446 R----LSLLNYDLTRVEFRPY---SPDYLEQYRDIDIALDTAPYNGGLTTCEALYMGVPV 498
Query: 464 VTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSK 523
+++ G H G S+LT G++ L+A+N+ YV+ A+QLA + M LR M +
Sbjct: 499 ISLRGRTHGSRFGASILTNAGVRELVAENDINYVRRAVQLAESPKLIEAYHMGLRANMKR 558
Query: 524 SPVCDGQNFALGLESTYRNMWHRYCKGDV 552
SP+ + Q + LE+ Y+ +W ++C +
Sbjct: 559 SPLMNVQGYMEDLENLYQEIWEKFCASKI 587
>gi|167721711|ref|ZP_02404947.1| putative TPR domain protein [Burkholderia pseudomallei DM98]
Length = 622
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 84 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 139
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 140 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 199
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 200 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 259
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 260 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 314
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 315 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 374
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 375 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 434
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 435 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 491
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 492 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 551
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 552 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 604
>gi|134281637|ref|ZP_01768345.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
gi|167826278|ref|ZP_02457749.1| putative TPR domain protein [Burkholderia pseudomallei 9]
gi|226193032|ref|ZP_03788642.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
Pakistan 9]
gi|134247304|gb|EBA47390.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
gi|225934632|gb|EEH30609.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
Pakistan 9]
Length = 776
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 294 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 645
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 646 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 705
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 706 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 758
>gi|167913028|ref|ZP_02500119.1| putative TPR domain protein [Burkholderia pseudomallei 112]
Length = 776
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 294 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 645
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 646 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 705
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 706 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 758
>gi|53720932|ref|YP_109918.1| TPR domain-containing protein [Burkholderia pseudomallei K96243]
gi|167817901|ref|ZP_02449581.1| putative TPR domain protein [Burkholderia pseudomallei 91]
gi|167847785|ref|ZP_02473293.1| putative TPR domain protein [Burkholderia pseudomallei B7210]
gi|167904747|ref|ZP_02491952.1| putative TPR domain protein [Burkholderia pseudomallei NCTC 13177]
gi|254298777|ref|ZP_04966228.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
gi|386863576|ref|YP_006276525.1| hypothetical protein BP1026B_I3558 [Burkholderia pseudomallei
1026b]
gi|418534702|ref|ZP_13100540.1| TPR domain-containing protein [Burkholderia pseudomallei 1026a]
gi|52211346|emb|CAH37335.1| putative TPR domain protein [Burkholderia pseudomallei K96243]
gi|157808480|gb|EDO85650.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
gi|385358823|gb|EIF64806.1| TPR domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385660704|gb|AFI68127.1| TPR domain-containing protein [Burkholderia pseudomallei 1026b]
Length = 776
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 294 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 645
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 646 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 705
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 706 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 758
>gi|167740689|ref|ZP_02413463.1| putative TPR domain protein [Burkholderia pseudomallei 14]
Length = 629
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 91 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 146
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 147 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 206
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 207 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 266
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 267 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 321
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 322 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 381
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 382 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 441
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 442 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 498
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 499 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 558
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 559 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 611
>gi|254183905|ref|ZP_04890496.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
gi|184214437|gb|EDU11480.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
Length = 837
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 299 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 354
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 355 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 414
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 415 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 474
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 475 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 529
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 530 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 589
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 590 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 649
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 650 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 706
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 707 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 766
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 767 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 819
>gi|126452788|ref|YP_001068175.1| hypothetical protein BURPS1106A_3955 [Burkholderia pseudomallei
1106a]
gi|242316562|ref|ZP_04815578.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
gi|403520597|ref|YP_006654731.1| hypothetical protein BPC006_I3996 [Burkholderia pseudomallei
BPC006]
gi|126226430|gb|ABN89970.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a]
gi|242139801|gb|EES26203.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
gi|403076239|gb|AFR17819.1| TPR repeat-containing protein [Burkholderia pseudomallei BPC006]
Length = 776
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 294 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 645
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 646 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIAGDIDDFVAKGI 705
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 706 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 758
>gi|167896374|ref|ZP_02483776.1| putative TPR domain protein [Burkholderia pseudomallei 7894]
gi|167920964|ref|ZP_02508055.1| putative TPR domain protein [Burkholderia pseudomallei BCC215]
gi|254261993|ref|ZP_04953047.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
gi|254220682|gb|EET10066.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
Length = 776
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 294 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 645
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 646 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 705
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 706 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 758
>gi|254194528|ref|ZP_04900959.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
gi|169651278|gb|EDS83971.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
Length = 776
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 294 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 645
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 646 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 705
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 706 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 758
>gi|76812180|ref|YP_331511.1| hypothetical protein BURPS1710b_0094 [Burkholderia pseudomallei
1710b]
gi|76581633|gb|ABA51108.1| TPR domain protein [Burkholderia pseudomallei 1710b]
Length = 821
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 274/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 283 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 338
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 339 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 398
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 399 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 458
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 459 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 513
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 514 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 573
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 574 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 633
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 634 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 690
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 691 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 750
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 751 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 803
>gi|237814265|ref|YP_002898716.1| TPR domain protein [Burkholderia pseudomallei MSHR346]
gi|237505900|gb|ACQ98218.1| TPR domain protein [Burkholderia pseudomallei MSHR346]
Length = 776
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 273/533 (51%), Gaps = 19/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 294 AIEAGRRSVELTPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P D + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 645
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D +V +
Sbjct: 646 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDNFVAKGI 705
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 706 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 758
>gi|126441749|ref|YP_001060867.1| hypothetical protein BURPS668_3873 [Burkholderia pseudomallei 668]
gi|126221242|gb|ABN84748.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 668]
Length = 776
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 271/527 (51%), Gaps = 18/527 (3%)
Query: 35 CNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIE 90
CN L Y D + L A + L P+++++ L + + +G+ A E
Sbjct: 243 CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQEAIEAGR 299
Query: 91 KAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+++ P A+ +L V D G A + + +++P A N L ++ +
Sbjct: 300 RSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQSHKIDV 359
Query: 151 HDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLV 209
+LF+AHR +G+ + L N++DPER L IG+VS D F H+VS ++ PLV
Sbjct: 360 SIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSYL-LPLV 418
Query: 210 YHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
++ V + Y + D+ T R R W + + +++ A VR D+IDI
Sbjct: 419 DELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVRHDRIDI 474
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
LV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P Q E
Sbjct: 475 LVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPMQAQFTE 534
Query: 328 LIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+ AVP S
Sbjct: 535 KIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIMRAVPGS 594
Query: 388 RLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY 447
R+V+ P D + EQ G+ R+ P + ++Q + +D+ LDTFPY
Sbjct: 595 RIVLGSIP--KDGGGAAMIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVCLDTFPY 651
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V + LASD+
Sbjct: 652 TGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGIALASDI 711
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 712 PALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 758
>gi|401565011|ref|ZP_10805868.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC6]
gi|400188260|gb|EJO22432.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC6]
Length = 585
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/389 (39%), Positives = 230/389 (59%), Gaps = 27/389 (6%)
Query: 177 DN-TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR 235
DN + +R L IGY+SPD+ H+VSYF+ L + D + + V Y A ++DA T RFR
Sbjct: 211 DNIVRSSQRKLRIGYISPDFREHAVSYFLTPLLRHFDGEQFMVFCY-ATGRSDAVTERFR 269
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
+ + WRD+ G + A ++ EDKID+LV+L+GH+ +N L +MA +PAPVQ++ I
Sbjct: 270 TRRV----TWRDLRGRQPRTAARLIAEDKIDVLVDLSGHSQDNALPIMAYRPAPVQISGI 325
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKHV---EELIRLPECFLCYTPS-----PEAGPV 347
GY NTTGL IDY ++D + P + V E ++R+P LCY P PEAG
Sbjct: 326 GYTNTTGLHVIDYFLSDEICIPKGDRAAEVGFTEHILRMPHSHLCYAPEEIRAMPEAG-- 383
Query: 348 CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS----VRH 403
TP NG++TFGSFNN AK+T ++L +W IL +V S+L++K K D+ +H
Sbjct: 384 YETPVRRNGYVTFGSFNNFAKVTDEILLLWRGILESVKGSKLIIKGKIASIDAGLNFAKH 443
Query: 404 RFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC 463
R L L + RV+ P + D+++ Y +DI+LDT PY G TTCE+LYMGVP
Sbjct: 444 R----LSLLNYDLTRVEFRPY---SPDYLEQYRDIDIALDTAPYNGGLTTCEALYMGVPV 496
Query: 464 VTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSK 523
+++ G H G S+LT G++ L+A+N+ YV+ A+QLA + M LR M +
Sbjct: 497 ISLRGRTHGSRFGASILTNAGVRELVAENDINYVRRAVQLAESPKLIEAYHMGLRANMKR 556
Query: 524 SPVCDGQNFALGLESTYRNMWHRYCKGDV 552
SP+ + Q + LE+ Y+ +W ++C V
Sbjct: 557 SPLMNVQGYMEDLENLYQEIWEKFCASKV 585
>gi|254186382|ref|ZP_04892899.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
52237]
gi|157934067|gb|EDO89737.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
52237]
Length = 836
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 274/533 (51%), Gaps = 20/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 299 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 354
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 355 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 414
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 415 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 474
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 475 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 529
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 530 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 589
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 590 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 649
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P + + EQ G+ R+ P + ++Q + +D+
Sbjct: 650 RAVPGSRIVLGSIPKDGGAA---MIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 705
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 706 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 765
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 766 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 818
>gi|440794162|gb|ELR15333.1| udpn-acetylglucosamine--peptide n-acetylglucosaminyltransferase
spindly, putative [Acanthamoeba castellanii str. Neff]
Length = 459
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 145/255 (56%), Positives = 176/255 (69%), Gaps = 11/255 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGVAYGEM +D A++ YELA HFNP C EA NNLGVIYKDRDNL+KA+ECY+ AL I
Sbjct: 216 YNLGVAYGEMGSYDKAVICYELAIHFNPFCCEAFNNLGVIYKDRDNLEKAIECYRSALGI 275
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P FSQ+LNNLGVVYTVQGK+D A +++ AI NP YAEAYNNLGVLYRD G I AI
Sbjct: 276 NPTFSQTLNNLGVVYTVQGKLDEAYAIVKSAIDVNPQYAEAYNNLGVLYRDEGEIKKAIA 335
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
Y++CL ++ SRNA QNRLLAMNY+ + +F+AH++WG+ R + N
Sbjct: 336 CYDKCLALNTLSRNASQNRLLAMNYLPDADIQTIFQAHKEWGEE--RCKHVAIRYRNDHQ 393
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
R + +GYVSPD+FTHSVSYFIE L HD N YS VVK DAKT R ++
Sbjct: 394 HNRLIKVGYVSPDFFTHSVSYFIEGILSQHDRSN-----YSNVVKEDAKTQRLKQLAQ-- 446
Query: 242 GGIWRDIYGIDEKKV 256
+WR IYG ++V
Sbjct: 447 --VWRGIYGKTAEEV 459
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN+ V Y E+ +++ A+ +Y A N EA N+GVIYK+ L+ A+ Y ALSI
Sbjct: 107 YNIAVIYSELNRYEEALQYYNAAIQHNKFYVEAYCNVGVIYKNVGQLEAAITFYDKALSI 166
Query: 62 KPNFSQSLNNLGVVYT-------VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
PNF+ + +N+ + T QGK A + +KA+ N YA+AY NLGV Y + G
Sbjct: 167 NPNFAIAKSNMAIALTDYGTFIKNQGKRVEAVQYYQKALTYNVQYADAYYNLGVAYGEMG 226
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
S A+ YE + +P A N L + Y + + +K E +R
Sbjct: 227 SYDKAVICYELAIHFNPFCCEAFNN--LGVIYKDRDNLEKAIECYR 270
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNL-------GVIYKDRDNLDKAVECY 55
N+GV Y + + + AI FY+ A NP+ A A +N+ G K++ +AV+ Y
Sbjct: 142 NVGVIYKNVGQLEAAITFYDKALSINPNFAIAKSNMAIALTDYGTFIKNQGKRVEAVQYY 201
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
Q AL+ ++ + NLGV Y G D A E AI NP EA+NNLGV+Y+D +
Sbjct: 202 QKALTYNVQYADAYYNLGVAYGEMGSYDKAVICYELAIHFNPFCCEAFNNLGVIYKDRDN 261
Query: 116 ISLAIDAYEQCLKIDP 131
+ AI+ Y L I+P
Sbjct: 262 LEKAIECYRSALGINP 277
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%)
Query: 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98
G K + LD+ + Y A+ + P+++ + N+ V+Y+ + + A + AI N
Sbjct: 76 GTRLKLQGKLDEGMSKYLAAIRVNPSYAPAYYNIAVIYSELNRYEEALQYYNAAIQHNKF 135
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
Y EAY N+GV+Y++ G + AI Y++ L I+P+ A N +A+
Sbjct: 136 YVEAYCNVGVIYKNVGQLEAAITFYDKALSINPNFAIAKSNMAIAL 181
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K D + Y A NP A A N+ VIY + + ++A++ Y A+ + ++ N+
Sbjct: 84 KLDEGMSKYLAAIRVNPSYAPAYYNIAVIYSELNRYEEALQYYNAAIQHNKFYVEAYCNV 143
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI 116
GV+Y G+++AA +KA++ NP +A A +N+ + D G+
Sbjct: 144 GVIYKNVGQLEAAITFYDKALSINPNFAIAKSNMAIALTDYGTF 187
>gi|418542280|ref|ZP_13107723.1| TPR domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418548903|ref|ZP_13113999.1| TPR domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385355974|gb|EIF62122.1| TPR domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385356826|gb|EIF62911.1| TPR domain-containing protein [Burkholderia pseudomallei 1258b]
Length = 775
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 274/533 (51%), Gaps = 20/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 294 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P + + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIPKDGGAA---MIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 644
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 645 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 704
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 705 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 757
>gi|217423849|ref|ZP_03455349.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
gi|217392912|gb|EEC32934.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
Length = 775
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 274/533 (51%), Gaps = 20/533 (3%)
Query: 29 PHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P AE CN L Y D + L A + L P+++++ L + + +G+
Sbjct: 238 PDDAE-CNTL---YADTLRVLNRLADAEAQVRRVLDGTPDYAEAHRVLNMTLSARGRYQE 293
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A E +++ P A+ +L V D G A + + +++P A N L
Sbjct: 294 AIEAGRRSVELAPNSVNAHGSLAVTLSDYGQTDEAEIHFRRAHELNPKDPMAYSNLLFCQ 353
Query: 145 NYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + +LF+AHR +G+ + L N++DPER L IG+VS D F H+VS +
Sbjct: 354 SHKIDVSIRELFDAHRAFGELYEAPLRGATPKHANSRDPERRLRIGFVSGDLFLHAVSSY 413
Query: 204 IEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ PLV ++ V + Y + D+ T R R W + + +++ A VR
Sbjct: 414 L-LPLVDELAKDPSVSLHFYYTFAREDSVTERIRSYAQG----WHMVMPLSDEQFAERVR 468
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D+IDILV+L+GH+ N+L M A +PAP+QV+WIGYP TTGL IDY + D A P
Sbjct: 469 HDRIDILVDLSGHSGRNRLPMFARKPAPIQVSWIGYPGTTGLEAIDYYLADPYAVPFGPM 528
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Q E I ++P A PV PAL NG ++FGSFN L K+ V+ VWARI+
Sbjct: 529 QAQFTEKIVHLSSGATFSPDGNAPPVNMLPALHNGHVSFGSFNRLNKLRGDVIAVWARIM 588
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP SR+V+ P + + EQ G+ R+ P + ++Q + +D+
Sbjct: 589 RAVPGSRIVLGSIPKDGGAA---MIEWFEQEGIARERLSFQPRS-VTAVYLQQHHHVDVC 644
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +TM G G++ ++ VGL+ IA + D++V +
Sbjct: 645 LDTFPYTGSTTVLNALWMGVPTLTMRGETLPSRAGLTWMSHVGLESFIADDIDDFVAKGI 704
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LASD+ ALA +R LR+ +SP Q A + +R MW R+C G P+
Sbjct: 705 ALASDIPALARIRGELRERCMRSPAFQPQRVAQDVSDAFRIMWRRWCDGQPPA 757
>gi|269839835|ref|YP_003324528.1| hypothetical protein Tter_2822 [Thermobaculum terrenum ATCC
BAA-798]
gi|269791565|gb|ACZ43705.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC
BAA-798]
Length = 529
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 266/504 (52%), Gaps = 6/504 (1%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
D L C+++ L I P+ S++L+ LG+++ G AA ++ +A+A +P A + N
Sbjct: 24 DVLASERACWRV-LQIAPDNSEALHLLGLLHGECGNYGLAATLLRRAVALDPGEASYHYN 82
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165
LG + +G + I + L++ PD A +A++Y DW +R
Sbjct: 83 LGNVLVASGQVERGITSLHHALELRPDYHRAHSGLYVALHYSALYDPRARHILALDWARR 142
Query: 166 FMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVV 225
+ + + DP R L IGYVS + H V YF+E + HD Y+V YS
Sbjct: 143 YADPLTPVPATPVDPDPHRRLRIGYVSGELRCHPVGYFLEPVIEAHDRTAYEVYCYSNDP 202
Query: 226 KADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMAC 285
++DA T R R + WRD++ + + ++ +VR D IDILV+L+ H ++L A
Sbjct: 203 RSDALTDRLRALSDR----WRDVWPLTDAELCELVRRDGIDILVDLSWHLGMHRLFAFAR 258
Query: 286 QPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG 345
+PAPVQVTW+ NTTG+ +DY + D PP + + + E L+RL +L P P+
Sbjct: 259 RPAPVQVTWLAAINTTGMRAMDYLVGDQHLCPPGSDELYTERLVRLSRFYLPCNPPPDLP 318
Query: 346 PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRF 405
P L GF FG FN L+KI P+VL +WA+IL A+P +RL + R
Sbjct: 319 GWAPADPLGRGFPVFGCFNRLSKIGPEVLDLWAKILLALPRARLRLIATGLQDPVTSSRL 378
Query: 406 LSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVT 465
+ LE G+ R++LL + D + Y+ +D++LDT PY+G TT+ E+L+MGVP VT
Sbjct: 379 MRALEGRGVAGERLELLS-PMPRTDLLATYNDIDVALDTLPYSGCTTSLEALWMGVPVVT 437
Query: 466 MAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
+ G+ A SLL GL+ L+++ ++EY+ +AL L D+ LA LR LR +
Sbjct: 438 LEGADMAGRATSSLLRWAGLQELVSRTQEEYIDIALGLGRDLGTLARLREHLRRWLRSVS 497
Query: 526 VCDGQNFALGLESTYRNMWHRYCK 549
+ D +F LE YR MW C+
Sbjct: 498 MSDQGSFTAELEDAYRRMWRDACQ 521
>gi|167589230|ref|ZP_02381618.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ubonensis Bu]
Length = 760
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 189/609 (31%), Positives = 289/609 (47%), Gaps = 76/609 (12%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + D A Y+ A P A+A N G +++ + LD AV CY+ A+ ++
Sbjct: 144 NLGNALRDQDELDAAARAYDKAIALEPAYADAHYNRGNVFRAQGRLDDAVRCYRRAVELQ 203
Query: 63 PNFSQSLNNLGVV--------------------------------YTVQGKMDAAAEMIE 90
P+ Q+ NLG V + G ++ AA +
Sbjct: 204 PDLHQAHLNLGNVLFERDELEPAIESLTRASQGGSVEAFLNLAAAFDRAGDLERAAASLR 263
Query: 91 KAIAANPTYAEAYNNLG-VLYR--------DAGSISLAI--------------------- 120
+AIAA P AE +++L VL R ++ I+LA+
Sbjct: 264 RAIAATPDRAELHHHLAQVLVRQGKRPEALESCRIALALPGQTAHMHTVSAEILCTLWQF 323
Query: 121 ----DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
+Y++ L++DP A RL I +L + +G R S
Sbjct: 324 EAGLASYDRALELDPSYAGAHSGRLFYQASIERCPPAQLLDHAMQFGARMAERASPRRHT 383
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
R L +G VS D +H V+ F+ D + Y+ + DA T +
Sbjct: 384 PRAAG-GRTLRVGLVSGDLRSHPVAVFLLGVAAALDPSKVVLAAYATQSREDATTAELK- 441
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
+ +WRDI +D++ A ++ D IDIL++L+GHT+ N+L + A +PAPVQ TW+G
Sbjct: 442 ---RHCAVWRDITALDDEAAADLIARDGIDILIDLSGHTSLNRLPLFAWKPAPVQATWLG 498
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG 356
Y TTG+ IDY I D P + VE RLP+ +LC+TP V P PA +G
Sbjct: 499 YFATTGIAEIDYIIGDRHVLPAGEEAHFVERPWRLPDSYLCFTPPQPPLAVGPLPAAGSG 558
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+TFGS NN K+ V+ +WAR+L AVP SRL++K ++R +S +
Sbjct: 559 SVTFGSLNNANKLGDAVIALWARVLHAVPGSRLLLKSPQLDEAALR---VSLAARFAAHG 615
Query: 417 LRVDLLPLI--LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
+ + LP+ H+ A++ +DI+LD FPY G TT+ E L+MGVP VT G +
Sbjct: 616 ITAERLPMRGGSARLAHLSAFNDIDIALDPFPYPGGTTSLEGLWMGVPLVTRRGGRFLSH 675
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
+G S+L + + IA+++D+YV A ASD+ LA +R LR+ + SP+CD FA
Sbjct: 676 IGESILHTLDMPEWIARDDDDYVAKAAAFASDLPRLAAVRAGLRERLQSSPLCDAARFAR 735
Query: 535 GLESTYRNM 543
LE+ + M
Sbjct: 736 HLETAFAQM 744
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 8 YGEMLK----FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G ML+ D AI Y A P AEA +NLG +D + A+ AL+++P
Sbjct: 77 FGNMLRAHGRLDDAIASYRRAVALKPDYAEAHSNLGNALRDAGDPHAAMLSCAQALALRP 136
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++Q+ NNLG Q ++DAAA +KAIA P YA+A+ N G ++R G + A+ Y
Sbjct: 137 DYAQAFNNLGNALRDQDELDAAARAYDKAIALEPAYADAHYNRGNVFRAQGRLDDAVRCY 196
Query: 124 EQCLKIDPDSRNAGQN 139
+ +++ PD A N
Sbjct: 197 RRAVELQPDLHQAHLN 212
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 4 LGVAYGEMLKFDMAIVFYE--LAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
LG+ ++ +F I E +A +P NN G + + LD A+ Y+ A+++
Sbjct: 44 LGLLACQLGRFPAGIALMERSIALRADPVY---LNNFGNMLRAHGRLDDAIASYRRAVAL 100
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+++++ +NLG G AA +A+A P YA+A+NNLG RD + A
Sbjct: 101 KPDYAEAHSNLGNALRDAGDPHAAMLSCAQALALRPDYAQAFNNLGNALRDQDELDAAAR 160
Query: 122 AYEQCLKIDPDSRNAGQNR 140
AY++ + ++P +A NR
Sbjct: 161 AYDKAIALEPAYADAHYNR 179
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A++ A P A+A NNLG +D+D LD A Y A++++
Sbjct: 110 NLGNALRDAGDPHAAMLSCAQALALRPDYAQAFNNLGNALRDQDELDAAARAYDKAIALE 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG-VLY 110
P ++ + N G V+ QG++D A +A+ P +A+ NLG VL+
Sbjct: 170 PAYADAHYNRGNVFRAQGRLDDAVRCYRRAVELQPDLHQAHLNLGNVLF 218
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+ +A+ + + A V YE P +A + LG++ + + +++++
Sbjct: 9 DAALAHHQAGRLADARVLYEAIRRSEPDQPDATHFLGLLACQLGRFPAGIALMERSIALR 68
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ LNN G + G++D A +A+A P YAEA++NLG RDAG A+ +
Sbjct: 69 AD-PVYLNNFGNMLRAHGRLDDAIASYRRAVALKPDYAEAHSNLGNALRDAGDPHAAMLS 127
Query: 123 YEQCLKIDPDSRNAGQN 139
Q L + PD A N
Sbjct: 128 CAQALALRPDYAQAFNN 144
>gi|407715135|ref|YP_006835700.1| hypothetical protein BUPH_03787 [Burkholderia phenoliruptrix
BR3459a]
gi|407237319|gb|AFT87518.1| TPR domain-containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 787
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 290/559 (51%), Gaps = 27/559 (4%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+A ++D A+ A NP E L + ++ L +A + ++I
Sbjct: 216 LGIALHRQGRYDDALPPLRKAAELNPEELETRTVLADTLRLKNMLAEAERECRAIVAINA 275
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ +++ LG+ QG++ +AI P A +++LGVL D G + A +++
Sbjct: 276 DSAEAQRILGIALVHQGQVAEGLAAARRAIEIAPNNASVHSSLGVLQLDLGLVQEAEESF 335
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKDP 182
L+ DP A N L A+++ D LF H + ++ + SQ+ + N + P
Sbjct: 336 RTALQKDPKDAIAANNYLFALSHNPTIDHDTLFAEHTGFARQHEDPVRSQWPNHANKRSP 395
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQN--YKVVVYSAVVKADAKTIRFREKVMK 240
+R L IG+VS D F H+V+ ++ P++ H ++ + VY+ V D T R
Sbjct: 396 DRKLKIGFVSGDLFRHAVASYL-LPILEHLAKDDSLSLHVYNNHVLEDDYTQALR----A 450
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W+ I G+ + ++A +R+++IDIL +L+GHT N+L +PAP+QVTW+GYP T
Sbjct: 451 CADTWQQITGMPDAQLANKIRDERIDILFDLSGHTGRNRLLTFVRKPAPIQVTWMGYPGT 510
Query: 301 TGLPTIDYRITDSLADP---PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
TGL +DY + D P PE+ + E+++ LP + P A PV PA+ NG
Sbjct: 511 TGLSAMDYYLVDKYGVPFGAPES--QFSEKIVHLPSS-ATFLPEKSAPPVNFLPAMHNGH 567
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
ITFGSFN L K+ V+ +WA +L A+P++++++ D + G++
Sbjct: 568 ITFGSFNRLNKLRRDVIALWAELLRALPDAKMLLGA--IATDQDEQMLIDWFTAEGIDRE 625
Query: 418 RVDL-----LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
R+ +P+ L H H +DI LDTFPY G+TT SL+MGVP +T+AGS A
Sbjct: 626 RLTFRRRSSIPVYLQQHFH------VDICLDTFPYTGSTTVLNSLWMGVPTLTIAGSTLA 679
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
G + ++ VGL+ + N++E+V + LASD+ ALA +RMSLR+ + S
Sbjct: 680 SRAGTTWMSHVGLEQFVVANKEEFVARGVALASDIPALAEIRMSLRERCAASAAFRPDVV 739
Query: 533 ALGLESTYRNMWHRYCKGD 551
A G+ R MW R+C G+
Sbjct: 740 AAGVSRALRIMWQRWCAGE 758
>gi|347821315|ref|ZP_08874749.1| hypothetical protein VeAt4_19630, partial [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 728
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 195/597 (32%), Positives = 292/597 (48%), Gaps = 77/597 (12%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG + A + YQ A + P+ ++ L N V Q + +AA ++E+ P
Sbjct: 49 LGFALHRQRRFGAARQAYQRASVLWPDDAELLVNHANVLIEQARNNAALPLLERLCGLCP 108
Query: 98 TYAEAYNNLG-------------------------------------VLYRDAGSISLAI 120
A + L + R+ G I AI
Sbjct: 109 EQAIVWIKLAECCYLPGLHDRGFAASQNAAARARTLHERAAALMQSAIHRRELGQIREAI 168
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW---- 176
+ E+ + + PD NRLL M + +L A R++G F Q +W
Sbjct: 169 EDSERAIALFPDEPGNHTNRLLFMLSAPQVDAAQLSAAAREYGAIFESPLRQ--AWPRFE 226
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
+ P R L +G++SPD+ HSV YF E L D + ++V + D+ + R
Sbjct: 227 QHRGAPWRRLRVGFLSPDFRMHSVMYFAEGLLARLDRRQFEVFAFHLFPDEDSVSAR--- 283
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
V + + + G+D ++ A +R IDILV+L GHT +N L +A + APVQV+W+G
Sbjct: 284 -VQRHADHFVRLAGLDARQQAEAIRAQGIDILVDLAGHTGHNGLLALAHKAAPVQVSWLG 342
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP---------V 347
+P TTGL +DYR TD + DPP+ + ++ E L RLP F CY P P V
Sbjct: 343 FPATTGLQAVDYRFTDEITDPPDAQAQYTERLYRLPTPFACYRPMSR-NPLWRYQPRYQV 401
Query: 348 CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCK----PFCCDSVRH 403
P PA G +TFGS NNL K++ +VL +W R+L A P SRL+++ K P D+ R
Sbjct: 402 HPAPAGERGCVTFGSCNNLGKLSDEVLALWGRVLAATPGSRLLIEGKNLDRPDFADAYRQ 461
Query: 404 RFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC 463
R + LGLE R+DL + L N + Y +DI+LD FP +G TTT ++L+MG+P
Sbjct: 462 R----CQGLGLEPQRLDL--VALRNANQYLTYHRIDIALDPFPLSGGTTTFDALWMGLPV 515
Query: 464 VTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSK 523
V+M G+ +GVSLLT +G +A+ +YV++A +LA+DV AL LR+ LRD M +
Sbjct: 516 VSMVGASFKGRMGVSLLTHLGRSEWLAETPQDYVRIAQRLAADVPALNALRLGLRDEMER 575
Query: 524 SPVCD----GQNFALGLESTYRNMW-HRYCKGDVP-SLKRMEMLQQQVVSEEPSKFS 574
S + GQ+F GL R MW H + + P S + E Q + P +++
Sbjct: 576 SALMREDLFGQHFGQGL----RAMWLHWLARAEHPHSAQAQEQALQDWLPRLPEEWT 628
>gi|254250924|ref|ZP_04944242.1| hypothetical protein BDAG_00089 [Burkholderia dolosa AUO158]
gi|124893533|gb|EAY67413.1| hypothetical protein BDAG_00089 [Burkholderia dolosa AUO158]
Length = 833
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 275/561 (49%), Gaps = 25/561 (4%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL ++ A+ + A P A+A N+ G Y +L A Y+ AL++
Sbjct: 279 NLSGVRRRQARYAEALAHAQHAIGLAPGLADAHNHAGNAYHGLGDLAAAEASYRTALALN 338
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NL VV + + D A +A+ A A Y NLG + R G++ A A
Sbjct: 339 PADAGVCHNLSVVLLKRERPDDALVFCRRALDAGRPTASMYVNLGDILRAQGNVDAAASA 398
Query: 123 YEQCLKIDPDSRNAGQ----NRLLAMNYINEG--HDDKLFEAHRDWGKRFMRLYSQYTSW 176
Y L D + G +RLL + + D L +A R +G+ ++Y
Sbjct: 399 YRDALSYVHDDADDGAAEVLSRLLFASAASASVPPDTYLHDARR-YGRHVAARSTRYA-- 455
Query: 177 DNTKDPERPLV--------IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
DP +G+VS D H V F+E+ L + D + VY+ + D
Sbjct: 456 ---HDPRERAARARQRPLRVGFVSGDLRQHPVGIFLESVLAHLDRTRIALHVYATSDEED 512
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
A T R + +WR I ++ A +R+D+ID+LV+L GHT + L + +PA
Sbjct: 513 AITARLK----PHAAVWRSIARVEPHAAARTIRDDEIDVLVDLAGHTQASGLAVFGWKPA 568
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
PVQ +W+G+ +TG IDY I D+ P + VE+ RLP+ +LC+TP + V
Sbjct: 569 PVQASWLGFFASTGCDAIDYFIGDAHTLPADEAHHFVEQPWRLPDSYLCFTPPSDDVAVG 628
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
P P NG +TFG F L K+ V++VWAR+L A+P +RL++K + +VR +
Sbjct: 629 PLPMAANGHVTFGCFGKLVKLGDDVVRVWARVLHALPTARLLLKARELEQAAVRDATAAR 688
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
Q G+++ R+ ++ AY+ +D++L FPY G TTT E+L+MGVP + M G
Sbjct: 689 FAQHGIDAGRL-AFDGASPRAEYFAAYNRIDVALSPFPYPGGTTTAEALWMGVPVIGMKG 747
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
+ ++ SLL G+ IA +ED+YV A+ A D LA LR LR + SP+CD
Sbjct: 748 ARFVTHICESLLHAAGMSDWIAADEDDYVAKAVSAAQDRARLAALRAGLRAQLLASPLCD 807
Query: 529 GQNFALGLESTYRNMWHRYCK 549
FA LE + MW RY +
Sbjct: 808 AARFARHLEHAFVGMWERYTE 828
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+G E + AI Y A P EA NNLG +D +A+ A+ ++
Sbjct: 76 NVGNMLRECGRLADAIAHYRRAIALRPDYPEAHNNLGNALRDAREPAQAMASCSRAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG V G++DAAA KAIA PTYA+A++NLG + R + AI
Sbjct: 136 PGYAEAYNNLGNVLQDVGELDAAAASYGKAIAFQPTYAQAHSNLGNVLRAQDRHADAIAH 195
Query: 123 YEQCLKIDP 131
Y + L++ P
Sbjct: 196 YRRALELLP 204
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LG+ ++ ++D + + P A NN+G + ++ L A+ Y+ A++
Sbjct: 41 MHFLGLLACQLKQYDAGLALMTRSLVARPD-ASYFNNVGNMLRECGRLADAIAHYRRAIA 99
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P++ ++ NNLG + A +AI P YAEAYNNLG + +D G + A
Sbjct: 100 LRPDYPEAHNNLGNALRDAREPAQAMASCSRAIELRPGYAEAYNNLGNVLQDVGELDAAA 159
Query: 121 DAYEQCLKIDPDSRNAGQN 139
+Y + + P A N
Sbjct: 160 ASYGKAIAFQPTYAQAHSN 178
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + A+ A P AEA NNLG + +D LD A Y A++ +
Sbjct: 110 NLGNALRDAREPAQAMASCSRAIELRPGYAEAYNNLGNVLQDVGELDAAAASYGKAIAFQ 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
P ++Q+ +NLG V Q + A +A+ P A + LG+
Sbjct: 170 PTYAQAHSNLGNVLRAQDRHADAIAHYRRALELLPALPAARHGLGL 215
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ + D A Y A F P A+A +NLG + + +D A+ Y+ AL +
Sbjct: 144 NLGNVLQDVGELDAAAASYGKAIAFQPTYAQAHSNLGNVLRAQDRHADAIAHYRRALELL 203
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + LG+ +G++ A A + A AA A +NNL + RDAG + A
Sbjct: 204 PALPAARHGLGLSLWARGEL-AEAAQVLGAAAAESGDASVHNNLAGVLRDAGDLERAAAH 262
Query: 123 YEQCLKIDP 131
Y + + +DP
Sbjct: 263 YARAIALDP 271
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
L +A Y LS +P +++ LG++ + DA ++ +++ A P A +NN+
Sbjct: 19 RLGEAKTLYDAILSAEPEQPDAMHFLGLLACQLKQYDAGLALMTRSLVARPD-ASYFNNV 77
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
G + R+ G ++ AI Y + + + PD A N
Sbjct: 78 GNMLRECGRLADAIAHYRRAIALRPDYPEAHNN 110
>gi|387900922|ref|YP_006331261.1| hypothetical protein MYA_0161 [Burkholderia sp. KJ006]
gi|387575814|gb|AFJ84530.1| TPR domain protein, Putative component of TonB system [Burkholderia
sp. KJ006]
Length = 725
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 276/563 (49%), Gaps = 25/563 (4%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + L+ A+ A P+ EA N+ G Y + LD A+ C++ A+++
Sbjct: 171 NLSAVRHKQLRCAEALTHALDAIRLAPNLGEAHNHAGNAYHGLNRLDDALACHRTAVTLN 230
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +NL VV ++D A +A+ A + NLG + R G++ A+ A
Sbjct: 231 PANAGACHNLSVVLLKLQRLDEALVYCRQALQAGAPAVLMHVNLGDILRAQGNVDAAVHA 290
Query: 123 YEQCLKI---DPDSRNAG-QNRLL--AMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
Y L + D D A +RLL A DD L +A R +G+ ++Y
Sbjct: 291 YRDALALVRDDADDVAATVLSRLLFSAAASACVSPDDYLADALR-YGRHLAARSTRYA-- 347
Query: 177 DNTKDPE--------RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
DP RPL +G+VS D H V F+E+ L + D + VY + D
Sbjct: 348 ---HDPRERAARAQGRPLRVGFVSGDLRLHPVGIFLESVLAHLDRTRIDLRVYVTTDEED 404
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
A T + + WR I + + A M+ +D ID+LV+L GHT ++ L +P+
Sbjct: 405 AITAKLKPHASG----WRSIAALPPEAAARMIHDDGIDVLVDLAGHTQSSGLAAFGWKPS 460
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
PVQ +W+G+ TTG IDY I D P VE RLP+ FLC+TP + V
Sbjct: 461 PVQASWLGFFATTGCDAIDYFIGDRYTLPDADAHHFVEAPWRLPDSFLCFTPPADEVEVG 520
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
P P +G TFG F L KI V+ W+RIL AVP++RL++K + VR ++
Sbjct: 521 PLPMAAHGHPTFGCFGQLVKIGDDVVHAWSRILHAVPDARLLLKAHELGREGVRDATVAR 580
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
+ G+ + R+ +L +++ AY+ +D++L FPY G TTT E+++MGVP + M G
Sbjct: 581 FARHGIGADRL-ILEAGSPRTEYLNAYNRIDVALSPFPYPGGTTTAEAMWMGVPVLGMKG 639
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
S ++ SLL G+ IA ED YV A+ D LA LR LR + SP+CD
Sbjct: 640 SRFVTHICESLLHAAGMGDWIADGEDAYVAKAIAAVRDRERLATLRAGLRAQLLASPLCD 699
Query: 529 GQNFALGLESTYRNMWHRYCKGD 551
+ FA LE+ + MW RY +
Sbjct: 700 ARRFATHLEAAFLAMWQRYTNSE 722
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+ ++ ++D + + + P A NNLG + ++ LD A+ Y+ A++
Sbjct: 34 LHFLGLLACQLKQYDAGLALMKQSLVERPD-ASYFNNLGNMLRESGRLDDAIAHYRRAVT 92
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P++ ++ NNLG G AA +AI YA+AYNNLG +D G + A
Sbjct: 93 LRPDYPEAHNNLGNALRDAGDPTAAMASCARAIELRAHYAQAYNNLGNALQDLGDLDGAA 152
Query: 121 DAYEQCLKID 130
YE+ +++D
Sbjct: 153 THYERAIELD 162
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E + D AI Y A P EA NNLG +D + A+ A+ ++
Sbjct: 69 NLGNMLRESGRLDDAIAHYRRAVTLRPDYPEAHNNLGNALRDAGDPTAAMASCARAIELR 128
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL----YRDAGSISL 118
+++Q+ NNLG G +D AA E+AI + + A A+ NL + R A +++
Sbjct: 129 AHYAQAYNNLGNALQDLGDLDGAATHYERAIELDASMAMAHANLSAVRHKQLRCAEALTH 188
Query: 119 AIDA 122
A+DA
Sbjct: 189 ALDA 192
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A+ A H A+A NNLG +D +LD A Y+ A+ +
Sbjct: 103 NLGNALRDAGDPTAAMASCARAIELRAHYAQAYNNLGNALQDLGDLDGAATHYERAIELD 162
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ + + NL V Q + A AI P EA+N+ G Y + A+
Sbjct: 163 ASMAMAHANLSAVRHKQLRCAEALTHALDAIRLAPNLGEAHNHAGNAYHGLNRLDDALAC 222
Query: 123 YEQCLKIDPDSRNAGQNR---LLAMNYINEG 150
+ + ++P + A N LL + ++E
Sbjct: 223 HRTAVTLNPANAGACHNLSVVLLKLQRLDEA 253
>gi|117925099|ref|YP_865716.1| hypothetical protein Mmc1_1802 [Magnetococcus marinus MC-1]
gi|117608855|gb|ABK44310.1| TPR repeat-containing protein [Magnetococcus marinus MC-1]
Length = 822
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/548 (30%), Positives = 280/548 (51%), Gaps = 14/548 (2%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
GVA+ + + A+ +E++ + A +N G++ +A + ++ A+ ++P+
Sbjct: 284 GVAWQAVGAWQEAMRAFEISLEQDASRAAVHSNFGMLCHILGKDVEAEQAFRHAIGLQPD 343
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ + NLG+ T Q ++ AA +A+ NP ++ + NLG + G + DA
Sbjct: 344 LAMAYANLGLALTRQYRLAEAAVACRQALQLNPKLSQGFFNLGPVLIKQGRAAEGTDAMA 403
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPER 184
Q L ++P + ++ + L +NY++ LF H+ +G + + Y W N K+PER
Sbjct: 404 QGLTLNPSAYSSFSSYLFGLNYLDID-PYTLFNHHQRFGAQLRKQYVPRRHWPNQKNPER 462
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
+ +G+VS D H + + L + +Y +K DA + ++++
Sbjct: 463 AIRVGWVSADLQHHPMGLMLLPLLKQLKGVRMEHFLYDGTLKHDAIS----QEIVALADH 518
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
I + + +A ++ D++D+L++L GHTA+N+L M A +PAPVQ++W GY N++GL
Sbjct: 519 TVAIRHLSHEALAERIQADRVDLLLDLGGHTADNRLPMFALKPAPVQLSWAGYVNSSGLG 578
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFN 364
+D I D P ++ + E ++RLP CY P PV PA NG+IT+G FN
Sbjct: 579 CMDGVILDCYTAPAGLERFYSEPILRLPHALYCYEPCQPHPPVASLPARKNGYITYGCFN 638
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
NLAK++P+ L++W IL +PNSRL +K C R + L LG+ + R L
Sbjct: 639 NLAKLSPRTLRLWGEILKRLPNSRLALKSASVCDAETREALVKQLAALGVSAQR-----L 693
Query: 425 ILLNHD----HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
I + +++ Y +DI+LD P+ G TT + L+ GVP VT G VG S+L
Sbjct: 694 IFIQPSDYGRYLEDYQFVDIALDPLPFNGGITTLQGLWQGVPIVTRWGLGQRDRVGGSIL 753
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T + L IA ++ Y++ A+ A+D+ AL LRM+L + S V FA
Sbjct: 754 TDLDLVSWIADSDQAYIECAVAKAADLDALERLRMALPSRLKSSHVGSALRFAPAFSELL 813
Query: 541 RNMWHRYC 548
R W R+C
Sbjct: 814 RQAWRRWC 821
>gi|307731403|ref|YP_003908627.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307585938|gb|ADN59336.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
CCGE1003]
Length = 820
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 266/499 (53%), Gaps = 12/499 (2%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
L+I P +++ LGV GK A ++A P A +++LG LY G++ L
Sbjct: 293 LAIVPEHAEAHRILGVTLIALGKRAEAIASCQRAADLAPRSAAVHSSLGTLYLGIGAMDL 352
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDN 178
A A L+++P + NA N L + + + LF+ H +G+ + + N
Sbjct: 353 AEKALRLSLELEPTNSNARSNLLFCLTHNSTIDKAALFKEHCVFGEIHDVPAAGSRRYPN 412
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVV--YSAVVKADAKTIRFRE 236
++P+R L IG+VS D+ H+V+Y+ P+V H Y++ + + Y D T + RE
Sbjct: 413 KRNPDRKLRIGFVSGDFCNHAVAYYF-LPIVQHLYRDPSLTLHFYYTFGLQDHMTAQLRE 471
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
+W + + + + +R+D IDI+V+L+GHTA+ ++ +A +PAPVQ +WIG
Sbjct: 472 C----AHVWNAVADMSDAALVKKIRDDNIDIVVDLSGHTAHTRIVALAQKPAPVQASWIG 527
Query: 297 YPNTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN 355
YP TTG+ DY I D P E ++ E+L LP Y P P PV PAL
Sbjct: 528 YPGTTGMAAFDYYIADRFVAPIDEFTEQFTEKLALLPSS-TAYMPPPNCPPVNGLPALHK 586
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
G+IT+GSFN L K++ +V+ +W+ IL A P SR+V+ D +L G++
Sbjct: 587 GYITYGSFNRLNKLSTEVIALWSTILRAQPTSRMVIGAIGSKLD--EETYLEWFRNEGID 644
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
+ R+ P L +MQ + +D+ LDTFPY G+TTT +L+MGVP VTM G+
Sbjct: 645 TSRLTFCPRTTLP-VYMQQHHHVDLCLDTFPYVGSTTTLNALWMGVPTVTMPGTSMPSRC 703
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
G L +VGL +A+++DE+V+ +++L D+ AL+ LR+ +R+ S + A G
Sbjct: 704 GAGWLEQVGLHDFVARDKDEFVKKSIELTRDLDALSALRIGMRERCLGSVPFHPEKVAGG 763
Query: 536 LESTYRNMWHRYCKGDVPS 554
L R MW R+C + P+
Sbjct: 764 LSIALRTMWQRWCADETPT 782
>gi|386392026|ref|ZP_10076807.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfovibrio sp. U5L]
gi|385732904|gb|EIG53102.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfovibrio sp. U5L]
Length = 741
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 191/558 (34%), Positives = 277/558 (49%), Gaps = 34/558 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG AY + + A + A P A NNLG ++ +A+ Y+ AL +
Sbjct: 198 HLGSAYLHQGQPERAAHAFRRALALRPDYPSAHNNLGNALRELGQPQEAMASYRQALRCQ 257
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + + NLG++ QG++ AA E +A+A P EA+ N ++ G I A+ A
Sbjct: 258 PNHAMAHTNLGIMLQSQGQVQAALECHARALALAPANVEAHVNSANALKELGRIEAAVAA 317
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE-----------GHDDKLF-EAHRDWGKRFMRLY 170
Y + L +DPD A N LL + N G D L +A+R+ G
Sbjct: 318 YGRALALDPDRLEARTNLLLLEAFSNRLTPQAFLAEARGLDRVLTGQANREGG------- 370
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDY-FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
S R L +GYVS D H V +F+ L HD + +V +Y D
Sbjct: 371 --IASLPRRARQGRRLRVGYVSGDLCGKHPVPFFLGPLLAAHDRRRVEVFLYPTQRARDD 428
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
T E++ + G W + G+ +++ A VR D ID+LV+L+GHT N+LG+ A + AP
Sbjct: 429 TT----ERLQRLGDHWSPLVGLTDRQAAERVRADGIDVLVDLSGHTRYNRLGIFARRAAP 484
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCP 349
VQ ++GY TTGL +DY I DS+ P E + E RLP +LCY + P
Sbjct: 485 VQAHYLGYCATTGLSAMDYWIGDSVLFPEEEIPPYSEAPWRLPRPYLCYDGRED----LP 540
Query: 350 TPALT---NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFL 406
PA T NG I FGSFN+L+KI + +W+RIL A+P +L++K + R R L
Sbjct: 541 GPAWTPRDNGEIWFGSFNHLSKIQNATVDLWSRILSALPEGKLLLKSGQLDHAANRERML 600
Query: 407 STLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF-PYAGTTTTCESLYMGVPCVT 465
+ E G+ R+ L+ HM AY L+D++LD +G TTTC++L+MGVP VT
Sbjct: 601 AAFEGRGISRDRLVLMGQTANWQAHMAAYDLIDVALDPVDAVSGVTTTCDALWMGVPVVT 660
Query: 466 MAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
MAG A + SL++ +G +A Y LA+ LA DV LR R+ M SP
Sbjct: 661 MAGDRLATRMAASLISGLGHGDWVAATPQAYAGLAVALARDVAGRTRLRPRQRERMRASP 720
Query: 526 VCDGQNFALGLESTYRNM 543
+ D ++ A LE Y M
Sbjct: 721 LTDARDLARSLEDAYEAM 738
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P + + LG+ R + A+E A++ PN ++LG Y QG+ + AA
Sbjct: 156 PESGKGWHLLGLSLVARGDGAAALEPLLRAVATLPNDVDLWDHLGSAYLHQGQPERAAHA 215
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+A+A P Y A+NNLG R+ G A+ +Y Q L+ P+ A N L + +
Sbjct: 216 FRRALALRPDYPSAHNNLGNALRELGQPQEAMASYRQALRCQPNHAMAHTN--LGIMLQS 273
Query: 149 EGHDDKLFEAH 159
+G E H
Sbjct: 274 QGQVQAALECH 284
>gi|307103158|gb|EFN51421.1| hypothetical protein CHLNCDRAFT_59252 [Chlorella variabilis]
Length = 4411
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 211/632 (33%), Positives = 286/632 (45%), Gaps = 165/632 (26%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAV--------- 52
YNLGVA GE + D AI Y A +P AEA N+GV+++ + LD+A+
Sbjct: 306 YNLGVAAGEAGEADEAIEHYRTAVGLSPRYAEAWCNMGVLFRQQGQLDRAIAAYEQALAA 365
Query: 53 --------------------------------ECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y+ AL+++P +++L NLGV QG
Sbjct: 366 APHLEVVQLNLAVALTEHGTRLKAAGEAAEGIAAYERALALQPRHAEALYNLGVARAEQG 425
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD-------- 132
+ D A M + A+ P AEA+NNLGVLYR+ G++ A+ Y L P+
Sbjct: 426 QADRALFMYQTALLVQPGCAEAHNNLGVLYREQGNMERAVQCYLAALNARPNFPQARPGC 485
Query: 133 ---------SRNAGQNRLLAMNYINEGHDDKLF--------------EAHRDWGKRFMRL 169
R +G N LA+ Y +G + EA+ + G L
Sbjct: 486 RLPRQQLPSGRGSGLNN-LAVIYTQQGRAQEALQLLQAAVMAAPTYAEAYNNLGV-LQEL 543
Query: 170 YSQYTSW---DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVK 226
+ + D RPLV+GY+SPD FTHSVSYF EAPL +HD +V+ YS V K
Sbjct: 544 HPRLPPLGLPDVDATEGRPLVVGYLSPDLFTHSVSYFAEAPLAHHDPAAVRVIAYSCVPK 603
Query: 227 ---------ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTAN 277
D+KT R + +V+ GG W RED++D+LVELTGHTA+
Sbjct: 604 PASKTPLPQPDSKTERLKGEVLAAGGTW---------------REDRVDLLVELTGHTAS 648
Query: 278 NKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA-DPPETKQKHVEELIRLPECFL 336
N+LG MA +PAPVQ + G+ + + ++LA PE + L+ +P L
Sbjct: 649 NRLGTMAMRPAPVQRS-CGF--------VTFGSFNALAKQTPEVLRVWARILLAVPGSRL 699
Query: 337 CYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPF 396
P A V Q W R+ A R V P
Sbjct: 700 VLKNKPFACEVVCN------------------------QYW-RVFEAEGVERTRVDLLPL 734
Query: 397 CCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
+ H L Q G+ + +D P YAGTTTT ES
Sbjct: 735 AAANRDH-----LAQYGMMDVSLDPWP-----------------------YAGTTTTAES 766
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH-LIAKNEDEYVQLALQLASDVTALANLRM 515
LYMGVPC+T+AG+ HAHNVGVSLLT VGL+H +A++ DEYV+ A L D+ ALA LR
Sbjct: 767 LYMGVPCLTLAGACHAHNVGVSLLTAVGLQHDWVARSVDEYVEQAAALTRDLPALAALRA 826
Query: 516 SLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
LR M +SP+CD F LE YR +W R+
Sbjct: 827 GLRQRMLQSPLCDAPAFVRRLEGVYRTLWQRW 858
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 55 YQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
Y+ A+ + P ++ + NLGV G+ D A E A+ +P YAEA+ N+GVL+R G
Sbjct: 291 YERAVQVAPAYAPAHYNLGVAAGEAGEADEAIEHYRTAVGLSPRYAEAWCNMGVLFRQQG 350
Query: 115 SISLAI 120
+ AI
Sbjct: 351 QLDRAI 356
>gi|23013697|ref|ZP_00053564.1| COG3914: Predicted O-linked N-acetylglucosamine transferase,
SPINDLY family [Magnetospirillum magnetotacticum MS-1]
Length = 659
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 279/556 (50%), Gaps = 26/556 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG A ++ + A V Y A PH L +A + + A +
Sbjct: 114 FNLGNARLQLGEAAAAEVCYRRALELAPHLPVIHAQLARCLDALGRAQEAADAMEAASRL 173
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P + L +LG + G++ AA E + AI+ NP +A A+ NLG ++ G + A
Sbjct: 174 APGDWRMLTDLGALQQQAGRITAAKESLRSAISLNPAHASAHYNLGNVFYGEGRATEACA 233
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
++ +D R+A N L ++Y+ + ++ + HR +R + + NT D
Sbjct: 234 CWQAAWTMDTGLRDAASNYLNGLHYLPKMSGEETGKIHRQMMERMG--APTPSGYANTPD 291
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P R + +GYVS D H + + L HD YS D T R +
Sbjct: 292 PGRVIRVGYVSADLRRHPLGLLMRPVLKGHDPARIFAACYSTRSGDDDITPELR----RH 347
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+WRD+ G+D + +A ++++D +DILV+L G TA N+L + A +PAPVQ++W+GYP TT
Sbjct: 348 AALWRDVAGLDAEALARLIQDDGMDILVDLDGQTAGNRLDLFARKPAPVQISWLGYPFTT 407
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY----TPSPEAGPVCPTPALTNGF 357
GL +DY + D PPE + E ++ LP LCY TP P+ P P L G
Sbjct: 408 GLAAMDYALMDRATVPPEAEGWFSETVLLLPGSRLCYQGAQTPEPQ-----PPPMLRRGH 462
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+TFGSFNN+AK+ +V+ WARIL VP SRLV+K V G++
Sbjct: 463 VTFGSFNNIAKLNGQVVASWARILHRVPGSRLVLKWPHLAWKEVASPLREAFAAQGIDPD 522
Query: 418 RVDLL----PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
R++L P LL Y +DI+LD FPY G T+CE+L+MGVP VT+AG
Sbjct: 523 RLELRGNSPPSQLLAE-----YGDVDIALDPFPYCGAFTSCEALWMGVPVVTLAGPRPFS 577
Query: 474 NVGVSLLTKVGLKHLIAKNE-DEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
++LL+ +GL+ +A+ + EY LA+ LA+++ L LR LR M ++ + D
Sbjct: 578 RQSLALLSAMGLEGDLARFDLAEYEDLAVSLAANLPRLEELRRELRPAMRRT-IGDSAAH 636
Query: 533 ALGLESTYRNMWHRYC 548
LE +R +W +C
Sbjct: 637 LAALEQVFRQVWTAWC 652
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
+P A+A N GVI + D+A++ + AL++ P ++ N G +++ G+ + A
Sbjct: 38 SPEAAKALTNRGVIAQGGGRTDEALDLHGRALALVPGLAEGWCNRGDLFSDLGRWNEAQA 97
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+A +P A+ NLG G + A Y + L++ P
Sbjct: 98 DFARAAKLSPQLLPAWFNLGNARLQLGEAAAAEVCYRRALELAP 141
>gi|367476410|ref|ZP_09475794.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 285]
gi|365271280|emb|CCD88262.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 285]
Length = 727
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 278/552 (50%), Gaps = 13/552 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G A+ ++ + D AI + A P A N G + D+A+ + ++
Sbjct: 184 LINRGCAFKDLRRADEAIAEFNRALALAPDDTTALINRGETFLTLKRNDEALADFDRVIA 243
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P F+ V + ++ A E ++A+A P A+A + +G + G A+
Sbjct: 244 LDPRFTLGWLGRANVLMLNKQVSEALEACQRALAIEPNSAKALSQIGQCHALLGDAQAAV 303
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWD--N 178
+++ L IDP A NR+ ++++ G+ A +W +R ++ D N
Sbjct: 304 AFFDRVLAIDPSDEIALANRIFSLDFCEVGYAQHQ-AARSEWWRRIGSRIAEAHPPDHAN 362
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
DP R LV+GYVS D+ HS + L HD +V+ YS D T ++
Sbjct: 363 VLDPHRRLVVGYVSGDFREHSAARTFRPVLQNHDKSQVEVICYSNSPVQDEITASLKQAA 422
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ WRD+ + ++ +R D++DILV+L+GH+ N+LG A +PAPVQVT G+
Sbjct: 423 DR----WRDVMQWSDDQLTECIRADQVDILVDLSGHSRGNRLGTFARKPAPVQVTAWGHA 478
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TGL T+DY D + PPE + E++ LP C + P PE P ++NG +
Sbjct: 479 TGTGLTTMDYLFGDPVMAPPEVRHLFAEQVHDLP-CMMIIEPPPEGLRSLEAPVISNGHV 537
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
T+G+F +++ V+ VWARIL A SRL+VK +++ + L+ G+ + R
Sbjct: 538 TYGAFTRANRLSSAVIDVWARILRADVTSRLLVKDYLLSDIAIQAKLLAEFAARGIAADR 597
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+DL+ + +H+ A+ L+DI LD FP G + E+L+MGVP ++ GS G +
Sbjct: 598 IDLIGPTSRD-EHLAAHRLIDIWLDPFPNGGGVSAWEALHMGVPVISKLGSGMCSRAGAA 656
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
+LT +G+ +A +D+YV +AL+ +D L +R L DL++ C + +E+
Sbjct: 657 ILTAIGMADWVATTDDDYVDIALRSTAD--QLRTIRRQLPDLIAAR--CAPPIYTRAVEA 712
Query: 539 TYRNMWHRYCKG 550
YR MW YC+G
Sbjct: 713 AYRTMWQTYCRG 724
>gi|456354096|dbj|BAM88541.1| O-linked N-acetylglucosamine transferase, SPINDLY family [Agromonas
oligotrophica S58]
Length = 740
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 277/548 (50%), Gaps = 9/548 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ G+ + F+ A+V + A P A G +Y ++A + AL+
Sbjct: 197 FGKGLVNINLRHFEQALVAFNAALAIKPDAAAVIAQRGRLYIQMARFEEAEADFNAALAT 256
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P +L V + ++ A ++ + NP A LG + G + AI
Sbjct: 257 DPMLETALLGRAHVCVLTERIAPAMAACKRVLERNPASEVALAWLGACFAKQGDTAAAIQ 316
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA-HRDWGKRFMRLYSQYTSWDNTK 180
+++ L+I PD +A ++ A+++ G D + +A R+W R + +
Sbjct: 317 HFDRALEIKPDFEDAILKKIFALDFY-PGADIAVHQAVRREWWDRIGAHIPRLALGAIDR 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
D ER + +GYVS D+ +HS + L +HD+Q +K++ YS D+ T E
Sbjct: 376 DAERRITVGYVSSDFRSHSAALTFLPVLRHHDHQPFKIICYSCSPLVDSVT----EHCKA 431
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W D + + ++++A +R D++DILV+L+GH+A N+L + A +PAP+QVT G
Sbjct: 432 ASDGWVDAWQMSDEELAVRIRSDQVDILVDLSGHSAGNRLTLFARKPAPIQVTAWGNATG 491
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPT+DY D + P + EE+ LP + P P A P P P L NG++TF
Sbjct: 492 TGLPTMDYFFADPVTVPEAVRPLFAEEVYDLP-ALITTDPLPGAQPT-PLPMLQNGYVTF 549
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G FN + KI+ +VL VW+ + A+P++R+VVK +R ++ G+ R+
Sbjct: 550 GVFNRVDKISDQVLDVWSALFRALPDARVVVKNGALDDSFLRDGLIARFVAHGIAESRLT 609
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L + +H+ A++L+DISLD FP G +T ESL GVP V G+ A G +++
Sbjct: 610 CLGSSM-RQEHIAAFALVDISLDPFPQNGGVSTWESLQAGVPVVAKLGNSSASRAGGAIV 668
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VGL +A++++ YV +AL+ A+D +ALA LR L ++ SP + + +E Y
Sbjct: 669 KAVGLDDWVAEDDEAYVAIALKYAADPSALARLRAELPARVASSPAGNVVTYTRKVEEGY 728
Query: 541 RNMWHRYC 548
R W RYC
Sbjct: 729 RTFWRRYC 736
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG + + + D+A A P AEA NLG++ ++A + A++
Sbjct: 60 LHLLGASALDSGRLDLAEQALARAVAVEPRNAEAQANLGLVLSSMKRYEEARAVQERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KPNF+ +L LG A E ++AIAA P YA+AY N G+
Sbjct: 120 LKPNFATALTGLGNTLMNMQLFAQAIEAHDRAIAAKPDYADAYCNRGM 167
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P EA + LG D LD A + A++++P +++ NLG+V + + + A +
Sbjct: 54 PDHFEALHLLGASALDSGRLDLAEQALARAVAVEPRNAEAQANLGLVLSSMKRYEEARAV 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
E+AIA P +A A LG + + AI+A+++ + PD +A NR +A
Sbjct: 114 QERAIALKPNFATALTGLGNTLMNMQLFAQAIEAHDRAIAAKPDYADAYCNRGMA 168
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ M +++ A E A P+ A A LG + +A+E + A++ K
Sbjct: 96 NLGLVLSSMKRYEEARAVQERAIALKPNFATALTGLGNTLMNMQLFAQAIEAHDRAIAAK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + N G+ + + + A + ++A+A P + +A G++ + A+ A
Sbjct: 156 PDYADAYCNRGMAQLLLLRNEEARQSFDRALALAPRHMQATFGKGLVNINLRHFEQALVA 215
Query: 123 YEQCLKIDPDS 133
+ L I PD+
Sbjct: 216 FNAALAIKPDA 226
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
Y+ + D C Q+ L++ P+ ++L+ LG G++D A + + +A+A P AE
Sbjct: 34 YRSGRHADAQTICGQI-LALVPDHFEALHLLGASALDSGRLDLAEQALARAVAVEPRNAE 92
Query: 102 AYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A NLG++ A E+ + + P+
Sbjct: 93 AQANLGLVLSSMKRYEEARAVQERAIALKPN 123
>gi|328875280|gb|EGG23645.1| glycosyltransferase [Dictyostelium fasciculatum]
Length = 687
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 268/486 (55%), Gaps = 15/486 (3%)
Query: 71 NLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK-I 129
++G +YT QGK+ A + I+ AI P EA+ L + G S A+ +K
Sbjct: 204 HIGRLYTKQGKITQANKHIDNAIRGKPVMWEAHMEKAGLEQKEGESSNAVRRLGYMVKST 263
Query: 130 DPDSRNAGQNRLLAMNYIN--EGHDD--KLFEAHRDWGKRFMRLYSQYTSWDNTKDPER- 184
D + LL + Y+N E D+ ++++ + K + + S D K +R
Sbjct: 264 DTTPEMKKRAMLLKIFYMNSLENSDNGKEIYDESISYFK-LLNIKPYQFSEDQIKGFKRQ 322
Query: 185 -PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYS-AVVKADAKTIRFREKVMKKG 242
P+ IGY+S + H ++YF++ L YH + ++V ++ V+ DA T R + +
Sbjct: 323 SPIKIGYLSSHFKEHPIAYFMDGILEYHRSEMFQVHIFQIGQVEEDAYTARMKSYIHPDN 382
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMAC-QPAPVQVTWIGYPNTT 301
W + K +A M+R I IL L HT + G +A +PAP+ V ++GYPNT+
Sbjct: 383 --WHVLRSDSCKLLADMIRSHNIAILSCLDVHTERD--GEIASYRPAPIMVNYLGYPNTS 438
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP-EAGPVCPTPALTNGFITF 360
G+ TI YRITDS ADP +TKQ E+LIRLP FL + S PV P NG++TF
Sbjct: 439 GIDTIQYRITDSFADPQDTKQPWSEKLIRLPNSFLTFRASHLTVHPVSVAPCAKNGYVTF 498
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G +N L+K+ + W +IL +P +RL++K F +S + L++LG+++ RV
Sbjct: 499 GCYNTLSKVQDPTWKCWKQILDRLPQARLIIKAPLFIEESAAQHYRDRLQKLGVDTSRVS 558
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L + +H +Y MD+SLD FPY GTTT+ +SL+MGVP VT AG+ H H VG S+L
Sbjct: 559 LRAYSMDTQNHYVSYDEMDVSLDPFPYNGTTTSMDSLWMGVPFVTYAGTTHVHRVGASIL 618
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VGL L+ + EYV +A++L D+ + ++R SLRD +SKS + D ++F + LE Y
Sbjct: 619 NNVGLGDLVGYSTQEYVDIAVKLGQDLDRIKSIRSSLRDTLSKSILSDPKSFTIQLEDKY 678
Query: 541 RNMWHR 546
M+++
Sbjct: 679 IEMFNQ 684
>gi|254250923|ref|ZP_04944241.1| hypothetical protein BDAG_00088 [Burkholderia dolosa AUO158]
gi|124893532|gb|EAY67412.1| hypothetical protein BDAG_00088 [Burkholderia dolosa AUO158]
Length = 839
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 185/588 (31%), Positives = 277/588 (47%), Gaps = 40/588 (6%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y LG++ + FD A +E A +P A A LG + + +++V + A+ +
Sbjct: 254 YALGLSLRGIQDFDGAARLFERACEIDPGYAPAWARLGELRCQQGEYEESVRLCRHAIEL 313
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P + + N LG+ Y +M AA AI NP A+A++NL + A+D
Sbjct: 314 DPELADAYNFLGLAYHNLDRMAAAELSHRHAIDLNPDDADAHHNLAAALFRLDKLDDAMD 373
Query: 122 AYE--QCLKIDP-------------------------DSRNAGQNRLLAMNYINE----- 149
Y Q L +DP D+ + +R A N
Sbjct: 374 EYRKAQELGVDPMKIRLTLGDILWAKRDFAGAIAAFRDAVDHDPHRAYARLMFNMSISPL 433
Query: 150 -GHDDKLFEAHR--DWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
DD + EA R D+ R R + RPL +G+VS D H V F+E+
Sbjct: 434 FAPDDWIAEARRYGDYLARDARRFEHDREQRARDARGRPLRVGFVSGDLRQHPVGIFLES 493
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
L + D + Y D T R + + W+ + + + A M+R+D ID
Sbjct: 494 VLAHLDRTRIEPHAYVTFAIEDGVTARLKPRFAS----WQKLTCMSRDQAAQMIRDDGID 549
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
+LV+L GHT + L + A +PAPVQ +W+G+ TTG IDY I D+ P + VE
Sbjct: 550 VLVDLAGHTNWSGLPVFAHRPAPVQASWLGFFATTGCREIDYFIGDAHTLPADEAHHFVE 609
Query: 327 ELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
+ RLP+ +LC+TP V P P NG +TFG F L KI+ V+ +W+++L A+P
Sbjct: 610 QPWRLPDSYLCFTPPAHDVAVGPLPMDANGHVTFGCFGKLTKISDDVVALWSQLLHALPG 669
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
+RL++K + L + G+++ R+ +L ++ AY+ +DI+L FP
Sbjct: 670 ARLMLKAHELGTGDLNRATLERFARHGIDAQRL-ILEAGSPRAEYFGAYNRIDIALSPFP 728
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
Y G TTT E+L+MGVP + M GS ++ SLL G+ IA +E Y+ A A D
Sbjct: 729 YPGGTTTAEALWMGVPVIGMKGSRFVTHICESLLHAAGMSDWIAADERAYLAKATAFAQD 788
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
ALA LR +LR+ SP+CD FA LE + MW RY GD P
Sbjct: 789 RDALARLRATLRERTLASPLCDAARFARHLEDAFHGMWARYAAGDPPG 836
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+G E + AI Y A P EA NNLG +D +A+ A+ ++
Sbjct: 87 NVGNMLRECGRLADAIAHYRRAIALRPDYPEAHNNLGNALRDAREPAQAMASCSRAIELR 146
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG V G++DAAA KAIA PTYA+A++NLG + R ++ AI
Sbjct: 147 PGYAEAYNNLGNVLQDVGELDAAAASYGKAIAFQPTYADAHSNLGNVLRAQDRLADAIVH 206
Query: 123 YEQCLKIDPDSRNA 136
Y + L+++ + R A
Sbjct: 207 YRRALELNTELRAA 220
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LG+ ++ ++D + + P A NN+G + ++ L A+ Y+ A++
Sbjct: 52 MHFLGLLACQLKQYDAGLALMTRSLVARPD-ASYFNNVGNMLRECGRLADAIAHYRRAIA 110
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P++ ++ NNLG + A +AI P YAEAYNNLG + +D G + A
Sbjct: 111 LRPDYPEAHNNLGNALRDAREPAQAMASCSRAIELRPGYAEAYNNLGNVLQDVGELDAAA 170
Query: 121 DAYEQCLKIDPDSRNAGQN 139
+Y + + P +A N
Sbjct: 171 ASYGKAIAFQPTYADAHSN 189
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P A A LG+ + + D A ++ A I P ++ + LG + QG+ + +
Sbjct: 245 LEPDDAPAHYALGLSLRGIQDFDGAARLFERACEIDPGYAPAWARLGELRCQQGEYEESV 304
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
+ AI +P A+AYN LG+ Y + ++ A ++ + ++PD +A N A+
Sbjct: 305 RLCRHAIELDPELADAYNFLGLAYHNLDRMAAAELSHRHAIDLNPDDADAHHNLAAALFR 364
Query: 147 INE 149
+++
Sbjct: 365 LDK 367
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + A+ A P AEA NNLG + +D LD A Y A++ +
Sbjct: 121 NLGNALRDAREPAQAMASCSRAIELRPGYAEAYNNLGNVLQDVGELDAAAASYGKAIAFQ 180
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++ + +NLG V Q ++ A +A+ N A+ L R G A+
Sbjct: 181 PTYADAHSNLGNVLRAQDRLADAIVHYRRALELNTELRAAHRGLAAALRATGDFDGALAH 240
Query: 123 YEQCLKID 130
L+ D
Sbjct: 241 ARAGLEPD 248
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
L +A Y LS +P +++ LG++ + DA ++ +++ A P A +NN+
Sbjct: 30 RLGEAKTLYDAILSAEPEQPDAMHFLGLLACQLKQYDAGLALMTRSLVARPD-ASYFNNV 88
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
G + R+ G ++ AI Y + + + PD A N
Sbjct: 89 GNMLRECGRLADAIAHYRRAIALRPDYPEAHNN 121
>gi|381160356|ref|ZP_09869588.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
gi|380878420|gb|EIC20512.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
Length = 655
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 278/550 (50%), Gaps = 19/550 (3%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E+ ++ A A P EA LG IY+ +A Y+ ++
Sbjct: 108 NLGGVLRELGRYTEAEAVCRRAIDLAPGMIEALYLLGNIYRATAREKEAEALYREVIARA 167
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+ ++LG++ QG++ A ++ +A P + LG+L A A
Sbjct: 168 SNNGQAHSSLGLLLMDQGRLSEAEPILRRASELRPNDPLTHARLGILLAKLDWTEAAEKA 227
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFM------RLYSQYTSW 176
L IDP A N L + Y G + L + R W + + + Q T+
Sbjct: 228 SRAALAIDPSCGAAFINLLHVLAYSKSGSGEALCQEARKWCQATLAVGADPQARKQITT- 286
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
+ + RPL +G +S ++ +H V+ F+ + L D ++ +Y AV++ D F+
Sbjct: 287 -HARASARPLRVGILSAEFGSHVVACFLNSWLWEIDPNRIELQLYPAVIRNDPDAEMFQR 345
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
+ + W + G+ + + A +R ++D+LVE +GHT N+LG++A + APVQ +IG
Sbjct: 346 RALS----WTPLVGLTDDEAAERLRAAQLDVLVETSGHTEGNRLGVLARRVAPVQCHYIG 401
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL--- 353
Y +TGL +DY +TD + PP VE++ RLP Y P EA P PA
Sbjct: 402 YFASTGLNAMDYFMTDEILIPPWHDSHFVEQVWRLPRTRYAYDPLIEA----PAPAWHQD 457
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
NG + GSFNNLAK+ + L +W+R++ A+P S L++K + +V+ R L TL G
Sbjct: 458 QNGRLRLGSFNNLAKVGEQTLALWSRVMRALPESMLILKGRGAEDAAVQTRILETLRGHG 517
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+E R++ P +H+ Y+ +D++LDT P+ TT C++L+MG P VT+ G A
Sbjct: 518 IEGARLEFWPYTPSRSEHLALYNQIDLALDTIPFNSATTACDALWMGTPLVTVLGGQLAG 577
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
S+LT +G IA+N DE+V + LASD+ +LR SLR M S +CDG++ A
Sbjct: 578 RQAASILTGLGRPEWIARNNDEFVDVVASLASDIPLRWHLRESLRAQMETSELCDGRSLA 637
Query: 534 LGLESTYRNM 543
LE ++ M
Sbjct: 638 RALEDSFEAM 647
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 38/86 (44%)
Query: 26 HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA 85
+P A A +NLGV+ K L +A AL P F + NLG V G+ A
Sbjct: 63 RLSPDSASAHSNLGVMLKKLGRLTEAESALHRALQCDPEFPAAYVNLGGVLRELGRYTEA 122
Query: 86 AEMIEKAIAANPTYAEAYNNLGVLYR 111
+ +AI P EA LG +YR
Sbjct: 123 EAVCRRAIDLAPGMIEALYLLGNIYR 148
>gi|225163601|ref|ZP_03725909.1| tetratricopeptide TPR_2 repeat protein [Diplosphaera colitermitum
TAV2]
gi|224801803|gb|EEG20091.1| tetratricopeptide TPR_2 repeat protein [Diplosphaera colitermitum
TAV2]
Length = 652
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 187/554 (33%), Positives = 283/554 (51%), Gaps = 45/554 (8%)
Query: 26 HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA 85
P A + L + K + + +A Y+ A + P+ +N G+ G+ A
Sbjct: 105 RLAPRSAGIVSALAHVQKLQGRVKEAASAYERATQLAPDSPDIWSNYGLTLASFGQNLRA 164
Query: 86 AEMIEKAIAANPTYAEAY----NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRL 141
+ E+A++ +P +A A L +YR I A+ Y+ C++ R +N L
Sbjct: 165 LQCHERALSLDPRFAPARFGRAQALHKIYR----IEEALADYDACIR---PGRLPAKNAL 217
Query: 142 LAMNY-------INEGHDDKLFEAHRDWGK--------RFMRLYS----QYTSWDNTKD- 181
LA +Y + + LF H +G+ R L + S DNT
Sbjct: 218 LARSYRLFALQNSDTLSREALFAEHLAYGRAVGGTPAPRRAPLLAPDAPAPASTDNTAHA 277
Query: 182 --PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
P+RPL +G +SPD THS +YF+E L + D + +++++Y D + RF+
Sbjct: 278 TAPQRPLRLGILSPDLRTHSCAYFLEPILRHLDPREFELLLYHDSFTEDEVSARFK---- 333
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANN-KLGMMACQPAPVQVTWIGYP 298
+ +WR+ G + + +RED+ DIL++LTGH +L A + APVQ+TW+GYP
Sbjct: 334 RMARVWRNFVGQSDAALERAIREDRPDILIDLTGHVGMTVRLPAFARRLAPVQITWLGYP 393
Query: 299 NTTGLPTIDYRITDSLADPP-ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG- 356
+TTG+P +DYR TD++ADPP + + + E L+R + P PV P P L +
Sbjct: 394 DTTGVPAMDYRFTDAVADPPGDADRFNTEHLVRFSSVAWSWQPPDALAPVAPPPCLASAG 453
Query: 357 -FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
+TFG FN+ K T + WAR+L AVP S L++K + VR + + + GL
Sbjct: 454 ASVTFGCFNSPTKFTDTLFATWARLLAAVPGSSLLLKGRDLEDAGVRAHLFARMNRAGLP 513
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R +LLP H+ Y +DI+LDTFPY GTTTTCESL+MG P +T+ G HA V
Sbjct: 514 EERTELLPRTADTASHLALYKRVDIALDTFPYNGTTTTCESLWMGRPVITIGGDRHAARV 573
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD--GQN-- 531
SLLT +G IA D+Y++ A LA+D +LA LR MS SP+ D GQ+
Sbjct: 574 SASLLTAIGRPEWIASCPDDYIRRAAALAADPASLAAASAGLRSQMSASPLMDHAGQSAR 633
Query: 532 FALGLESTYRNMWH 545
FA L++ +R + H
Sbjct: 634 FAAALQACWRAVVH 647
>gi|395650965|ref|ZP_10438815.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
protein [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 1104
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 282/540 (52%), Gaps = 11/540 (2%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
D A+ A +P A + L ++ ++ KA+ C + AL+++P+ + L+ G+
Sbjct: 82 DRALELIHRALLIDPDFAAGHHRLATLHFEKGQFAKALPCIERALALRPHDCRMLSRKGL 141
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
+ + D A + ++ I P +NN LY+D G ++ A Y++ + + +
Sbjct: 142 ILNRLERHDEAIAVFDQLIEREPGDYSHWNNAANLYKDIGQLATADTYYQKAVAL-AKRK 200
Query: 135 NA--GQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVS 192
+A NRL +++Y E D +F ++W RF + P+R L IG VS
Sbjct: 201 DALPYSNRLTSLHYDPERSRDFIFAVCKEWQARFGPKNVPLRPETRDRAPDRCLRIGLVS 260
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
H V I L +++ YS D T+R + V + W I +D
Sbjct: 261 DGLRQHPVGNMIVGVLENLPRHRFELFAYSTSQVCDHLTVRIQASVQQ----WLTIKHMD 316
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG-YPNTTGLPTIDYRIT 311
++ +A +R+D+IDIL++L GH A N++G MA QPAP+ V W+G NTTGL IDY +T
Sbjct: 317 DQALARRIRDDRIDILIDLCGHNAGNRMGAMALQPAPLLVKWVGGLINTTGLDAIDYLLT 376
Query: 312 DSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITP 371
D + P + E+LIRLP+ ++CY P P + PAL NGF+T+G FNN K+
Sbjct: 377 DRIESPQGEDGFYTEKLIRLPDDYICYDPPPYTPDIKALPALANGFVTYGCFNNPTKVND 436
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
+L WA ++ A P+SRL++K F ++R + G++ RV + + H H
Sbjct: 437 VLLAHWAELMRATPDSRLLLKGGAFGTRALRDHVHGVMAAHGIDRERVMIEGPV--GHKH 494
Query: 432 M-QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA 490
+ + Y+ +DI+LD +PY+G TTCE+L MGVP VT+ G A + L GL L+
Sbjct: 495 LLETYNRVDIALDPWPYSGGLTTCEALLMGVPVVTLPGPTFAGRHSATHLVNAGLPELVV 554
Query: 491 KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
+ +Y Q ++LA D+ +LA +R LR ++ SPVCD + FA + R +W RYC+G
Sbjct: 555 HSWAQYRQRVMELAGDLDSLARIRGHLRAVLMNSPVCDSERFAQHFGNALRAIWQRYCEG 614
>gi|78064816|ref|YP_367585.1| hypothetical protein Bcep18194_A3339 [Burkholderia sp. 383]
gi|77965561|gb|ABB06941.1| TPR repeat protein [Burkholderia sp. 383]
Length = 732
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 274/556 (49%), Gaps = 19/556 (3%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL L+ A+ + A P+ A+A N+ G Y D LD A ++ A+++
Sbjct: 178 NLSAVRHRQLRCAEALAHAQDAIRLAPNLADAHNHAGNAYHGLDRLDAAQASHRTAVTLN 237
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +NL VV ++D A +A+ A P A + NLG + R G++ A+ A
Sbjct: 238 PADAGACHNLSVVLLKLQRLDEALVYCRQALQAGPPAALMHVNLGDILRAQGNVDAAVHA 297
Query: 123 YEQCLKI---DPDSRNAG-QNRLL----AMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT 174
Y L + D D A NRLL A +N D L +A R +G+ +++
Sbjct: 298 YRDALALVRDDADDVAATVLNRLLFSAAASACVNPA--DYLADARR-YGRHLAARSTRHA 354
Query: 175 SWDNTKDPE---RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKT 231
+ RPL +G+VS D H V F+E+ L + + + VY + DA T
Sbjct: 355 HDPRERAARAQGRPLRVGFVSGDLRLHPVGIFLESVLAHLERTRIDLRVYVTTDEEDAIT 414
Query: 232 IRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQ 291
+ + WR I + A M+ +D+ID+LV+L GHT ++ L + +PAPVQ
Sbjct: 415 AKLKPHASG----WRSIAALGPDAAARMIHDDEIDVLVDLAGHTQSSGLAVFGWKPAPVQ 470
Query: 292 VTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP 351
+W+G+ +TG IDY I D P VE+ RLP+ FLC+TP V P P
Sbjct: 471 ASWLGFFASTGCDAIDYFIGDRYTQPDAEAHHFVEKPWRLPDSFLCFTPPACDVEVGPLP 530
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
G TFG F L KI V++ W+RIL A+P++RL++K + VR + +
Sbjct: 531 MAARGHPTFGCFGQLVKIGDDVVRAWSRILHALPDARLLLKAHELGREGVRDATAARFAR 590
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
G++ R+ +L ++ AY+ +D++L FPY G TTT E+L+MGVP + M G
Sbjct: 591 HGIDPDRL-ILEGGSPRAEYFAAYNRIDVALSPFPYPGGTTTAEALWMGVPVLGMKGGRF 649
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
++ S+L G+ +A ED YV A+ D LA LR LR + SP+CD +
Sbjct: 650 VTHICESVLHAAGMGEWVADGEDAYVAKAIAAVRDREPLATLRAGLRAQLLASPLCDARR 709
Query: 532 FALGLESTYRNMWHRY 547
FA LE+ + MW RY
Sbjct: 710 FAAHLEAAFIGMWQRY 725
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+ ++ ++D I E + P A NNLG + ++ LD A+ Y+ A++
Sbjct: 41 LHFLGLLACQLKQYDAGIALMEQSLVERPD-ASYFNNLGNMLRENGRLDDAIAHYRRAVA 99
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P++ ++ NNLG + AA E +AI P YAEAYNNLG +D G A
Sbjct: 100 LRPDYPEAHNNLGNALRDAREPAAAMESCARAIELRPGYAEAYNNLGNALQDLGDFDRAA 159
Query: 121 DAYEQCLKIDP 131
Y + +++DP
Sbjct: 160 SHYGRAIELDP 170
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E + D AI Y A P EA NNLG +D A+E A+ ++
Sbjct: 76 NLGNMLRENGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDAREPAAAMESCARAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG G D AA +AI +P+ A A+ NL + + A+
Sbjct: 136 PGYAEAYNNLGNALQDLGDFDRAASHYGRAIELDPSMAMAHANLSAVRHRQLRCAEALAH 195
Query: 123 YEQCLKIDPDSRNA 136
+ +++ P+ +A
Sbjct: 196 AQDAIRLAPNLADA 209
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + A+ A P AEA NNLG +D + D+A Y A+ +
Sbjct: 110 NLGNALRDAREPAAAMESCARAIELRPGYAEAYNNLGNALQDLGDFDRAASHYGRAIELD 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + + NL V Q + A + AI P A+A+N+ G Y + A +
Sbjct: 170 PSMAMAHANLSAVRHRQLRCAEALAHAQDAIRLAPNLADAHNHAGNAYHGLDRLDAAQAS 229
Query: 123 YEQCLKIDPDSRNAGQNR---LLAMNYINE 149
+ + ++P A N LL + ++E
Sbjct: 230 HRTAVTLNPADAGACHNLSVVLLKLQRLDE 259
>gi|288960866|ref|YP_003451206.1| TPR repeat-containing protein [Azospirillum sp. B510]
gi|288913174|dbj|BAI74662.1| TPR repeat-containing protein [Azospirillum sp. B510]
Length = 974
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 281/559 (50%), Gaps = 21/559 (3%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ LG+A D A A P A N G ++ D A+ C++ AL+
Sbjct: 413 LSGLGLARATA-GLDGATQAARRAMRVAPDDAVLAVNAGSAFQLDLRPDAALSCHRRALA 471
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMI-----EKAIAANPTYAEAYNNLGVLYRDAGS 115
++P + + N+G T++ +AA E I + +A A AY+NLGV + G
Sbjct: 472 LEPGNAAAWVNVG---TLRLDANAAEEAITPLNRARRLADPGQLALAYSNLGVAWMALGL 528
Query: 116 ISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTS 175
A+ ++ L PD N L + + + ++F HR + +R +
Sbjct: 529 HGQAVASFRAALDRAPDDAVIRSNMLFCLCFDEQADPVEVFREHRAF-ERHLPAVPAAPH 587
Query: 176 WDNTKDPERPLVIGYVSPDYFTH-SVSYFIEAPLVY-HDYQNYKVVVYSAVVKADAKTIR 233
++DPER L IGY+SPD+ + Y PL+ H+ +V Y DA T R
Sbjct: 588 MVESRDPERRLRIGYLSPDFQRYPGPGYHFLLPLIEGHNRGAVEVTCYHNDRSRDATTDR 647
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
F+ + WR + + ++++ +RED IDILV+ GH + N++ +MA +PAP+QV+
Sbjct: 648 FQAAADR----WRGVAALSDEELDRQIREDHIDILVDAGGHMSRNRMPLMARRPAPLQVS 703
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEA-GPVCPTPA 352
YPNTTGL +DY+ D PP+ HVEELIRLP C LCY P+ P P
Sbjct: 704 LPLYPNTTGLGAVDYQFADPRLAPPQADALHVEELIRLPGCVLCYRPAESVFAPPARPPM 763
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK-CKPFCCDSVRHRFLSTLEQ 411
NG ITFGSFNN+ K+ + +WAR+L AVP +RLV+K R L+ Q
Sbjct: 764 ERNGHITFGSFNNITKVNAATIALWARLLAAVPTARLVLKWRGLGDGGGAGLRLLAAFAQ 823
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
G+E+ R+DL + D Q Y +D++LD G TT C++L+MGVP + +G
Sbjct: 824 HGIEAERLDLRG---ITPDPYQDYVTIDVALDPAFANGGTTICDALWMGVPVLNQSGPTK 880
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
G ++L VGL L+ +++ EY+ ++LA+D L R +LR+ M +S + D
Sbjct: 881 IGRWGATMLDAVGLGELVTRDDGEYLARGVRLATDRAFLDAQRGNLRERMRRSALMDEFG 940
Query: 532 FALGLESTYRNMWHRYCKG 550
+ +E+ YR W R+C G
Sbjct: 941 YVRAVEAGYRAAWRRWCAG 959
>gi|401563739|ref|ZP_10804679.1| tetratricopeptide repeat protein [Selenomonas sp. FOBRC6]
gi|400189528|gb|EJO23617.1| tetratricopeptide repeat protein [Selenomonas sp. FOBRC6]
Length = 571
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/488 (35%), Positives = 251/488 (51%), Gaps = 20/488 (4%)
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPT-------YAEAYNNLGVLYRDAGSISLAIDAYEQ 125
G T + A M+E+ IAA A AY+ LG G S A++A+
Sbjct: 90 GKFRTQIAHLRACIAMLEERIAAEDRADYHRVFLASAYSLLGEALTLTGESSEAVEAFLA 149
Query: 126 CLKIDPDSRNAG---QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
+++ N L A NY+ + R +G + + T+ D +
Sbjct: 150 SSRLEMVREKKAVEYSNALFASNYLPSERRAAYAKLARGYGALYADVRPLSTASD-ARCG 208
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+ IGY+SPD TH V + L +D + V Y+ + D + FR V
Sbjct: 209 HDHIRIGYISPDLRTHPVGTLVRPLLTAYDRTRFAVYCYAKCAE-DGLSQEFRTAV---- 263
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+W +I G+ ++ AA+V D+IDILV+L GHT +N L ++A +PAPVQVT IGY NTTG
Sbjct: 264 DMWHNISGMAAEETAALVHSDEIDILVDLAGHTQHNALPVLAHKPAPVQVTGIGYFNTTG 323
Query: 303 LPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
L T+DY ++D DP + EE+IRLP CY + + P NG++TFG
Sbjct: 324 LATVDYMLSDVHVDPAGAEDAAFTEEMIRLPHSHFCYILPEDLPSIAEPPMERNGYVTFG 383
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
SFNN +K+T +VL++W +L VP SRL++K K F R + G+ + RV++
Sbjct: 384 SFNNFSKVTDEVLRLWGVLLETVPCSRLLLKSKLFGSAEGREIAEERFARCGIPTERVEM 443
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+H+ Y MDI+LDTFPY G TTCE+L MGVP VTM G+ H G SLL
Sbjct: 444 RGF---GSNHLAEYGDMDIALDTFPYTGGITTCEALAMGVPVVTMRGASHGARFGESLLI 500
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
GL LIA + YVQ+A LAS L LR +LR +++ SP+ D + + +E+ Y
Sbjct: 501 NAGLAELIAATPEGYVQIAAALASSSDTLHALRTNLRSILAHSPLTDARTYVRDVEAAYM 560
Query: 542 NMWHRYCK 549
+W R+ +
Sbjct: 561 EIWERFVR 568
>gi|427406698|ref|ZP_18896903.1| hypothetical protein HMPREF9161_01263 [Selenomonas sp. F0473]
gi|425708128|gb|EKU71169.1| hypothetical protein HMPREF9161_01263 [Selenomonas sp. F0473]
Length = 564
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 254/481 (52%), Gaps = 21/481 (4%)
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTY----AEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
++ ++ + A E IE+ + + AEAY+ LG G A+ A+ + ++
Sbjct: 92 IFHLRAMISALTERIERDPESRAYHTIFLAEAYSLLGSALTLTGETDAAVRAFVRSGDLE 151
Query: 131 PDSRNAG---QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD--PERP 185
N L A+NY+ E A+ +R+ LY+ D
Sbjct: 152 TTREKKAVEYSNALFAVNYLPEAARG----AYEGLPQRYAALYADMRPLRTPGDMYGHEK 207
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
+ +GYVSPD H V F+ L D + ++V Y+ + RE++ +W
Sbjct: 208 IRVGYVSPDLRRHPVVSFLYPLLHAFDAEEFEVYCYANNAEDAVSRALRRERI-----VW 262
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
R+I+G+ AA + D+IDILV+L+GHT +N L ++A +PAPVQ+T IGY NTTGLP
Sbjct: 263 RNIWGVPAADAAACICGDEIDILVDLSGHTKDNCLPVLAHRPAPVQMTGIGYFNTTGLPA 322
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNN 365
+ Y ++D DPP T+ EE++RLP CY P P P+ G++TFG FNN
Sbjct: 323 VRYMLSDVYLDPPGTEADCTEEVVRLPHSHFCYVPLSRMPDPAPPPSDRVGYVTFGCFNN 382
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI 425
+K+T +VL VW +L AVP++RL+VK K F R + G++ +RV +
Sbjct: 383 FSKVTDEVLCVWRALLDAVPDARLLVKSKLFAGAQGRGAAEERFVRAGIDPVRVTMRA-- 440
Query: 426 LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL 485
+ D++ Y+ MD++LDTFPY G TTCE+LYMGVP VT+ G H G SLL +G+
Sbjct: 441 -FSKDYLAEYAEMDVALDTFPYTGGLTTCEALYMGVPVVTLRGRSHGARFGESLLANIGI 499
Query: 486 KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
+ L A D YV++A LA+DV LR +LR +M SP+ D + + +E+ YR +
Sbjct: 500 EELAAPTSDAYVRIAAGLAADVDTRRALRENLRPMMQASPLMDIRGYTRDVEAAYRALMT 559
Query: 546 R 546
R
Sbjct: 560 R 560
>gi|423017188|ref|ZP_17007909.1| TPR repeat-containing protein [Achromobacter xylosoxidans AXX-A]
gi|338779767|gb|EGP44198.1| TPR repeat-containing protein [Achromobacter xylosoxidans AXX-A]
Length = 595
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 263/513 (51%), Gaps = 9/513 (1%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
L + +A+ + A+ + P +++ + L + + A + A+A +P
Sbjct: 88 LAAVLTQLGRTSEAIGVARRAIELDPRSAETHSALADALAAERRYKEAEACNQTALALDP 147
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFE 157
T+ +A NL +Y DAG ++ A + L P + A N L AMNY ++ +++F+
Sbjct: 148 THRKALINLSKIYIDAGEVTKAELMTRRTLAHYPTAPVARNNLLFAMNYSDDRTAEEVFQ 207
Query: 158 AHRDWGKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNY 216
A+RD+ + L S + N +DP R L +GYVSPD+ HS +YFIE +HD + +
Sbjct: 208 AYRDYDTDLCLPLRSTWKPHANKRDPARKLKVGYVSPDFRQHSGNYFIEPVFAHHDRERF 267
Query: 217 KVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTA 276
++ Y+ + DA T R + W + + ++A +R D IDIL+++ GHTA
Sbjct: 268 ELTAYAELAAEDATTPRLKAYFDH----WVPTAAMTDAQLAERIRADGIDILIDVAGHTA 323
Query: 277 NNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFL 336
N+LG A +PAPV +TW+G+ TTGL IDY +TD++ P + E+ RL +
Sbjct: 324 GNRLGAFARKPAPVSLTWLGFGYTTGLSAIDYIMTDAVMLPEGYEHLFSEKPWRLEQGNF 383
Query: 337 CYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPF 396
Y PS G P PAL +G++T G+ ++ + ++VW+ IL +P + LVV +
Sbjct: 384 IYRPSNTMGEPGPLPALASGYVTLGTLTRAIRMNDRTVRVWSEILRRLPTAHLVVNSTSY 443
Query: 397 CCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
+ + + E G+E R++ I MDI LD FP+ T E+
Sbjct: 444 RDGPMCEQLIRRFEAHGIERQRLE----IGCTSPAWDVLRAMDIGLDCFPHNSGVTLVET 499
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMS 516
LYMGVP VT+A +G S+L +G IA NE+ Y++ ++LASD+ AL R +
Sbjct: 500 LYMGVPYVTLADRPSVGRIGASVLQSIGHPEWIADNEEAYIRKVVELASDLPALQATRDT 559
Query: 517 LRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
LR M SP+ D FA E+ R M+ +C+
Sbjct: 560 LRAEMHASPLMDEPAFARKFEAALRGMFTNWCE 592
>gi|391232225|ref|ZP_10268431.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Opitutaceae bacterium TAV1]
gi|391221886|gb|EIQ00307.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Opitutaceae bacterium TAV1]
Length = 637
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 191/530 (36%), Positives = 278/530 (52%), Gaps = 17/530 (3%)
Query: 26 HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA 85
P A N L + K R +AV ++ A ++ + + + G+ + GK A
Sbjct: 103 RLTPDSAAGWNTLAFVLKVRGRPAEAVPAHERATTLDSGSADAWTHYGLTLSTLGKNFQA 162
Query: 86 AEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR---LL 142
++A+AA+P +A A I A+ YE LK P +A Q R L
Sbjct: 163 LRCHDRALAADPGFAMARFGRAQALHKINRIDEALADYEAYLKSGPPRDSALQARSYRLF 222
Query: 143 AMNYINEGHDDKLFEAHRDWGKRF--MRLYSQYTSWDNTK-DPE-RPLVIGYVSPDYFTH 198
A+ + +++ F H +G+ S T D PE RPL + +SPD TH
Sbjct: 223 ALQNSDLLSNEERFAEHLAYGRELGGAAGKSSVTGRDGRDLHPEKRPLRLAILSPDLRTH 282
Query: 199 SVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
S +YF+E L + D +++++Y + D + RFR + WR+ + +V
Sbjct: 283 SCAYFLEPVLRHLDPAQFELLLYHDHLVEDEISARFR----RLARTWRNFVARPDAEVER 338
Query: 259 MVREDKIDILVELTGHTANN-KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
+VRED+ DILV+L+GH +L + A + APVQVTW+GYP+TTG P +DYR TD++ADP
Sbjct: 339 IVREDRPDILVDLSGHIGMTIRLPLFARRLAPVQVTWLGYPDTTGTPGMDYRFTDAIADP 398
Query: 318 P-ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQV 376
P + + H E+L+R + P +A V P P L G +TFG FN+ K T +
Sbjct: 399 PGDADRFHTEKLVRFAPVAWTWQPPADAPAVAPPPCLAGGSVTFGCFNSPTKFTDSQFAL 458
Query: 377 WARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS 436
WARIL AVP SRL++K VR L+ L++ GL + RV+LLP H+ Y
Sbjct: 459 WARILAAVPASRLLLKGAGLEEAPVRELLLARLQRAGLPADRVELLPRTDDTASHLALYR 518
Query: 437 LMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEY 496
+DI+LDTFPY GTTTTCE+L+MG P +T+AG+ HA V SLL +G IA +++Y
Sbjct: 519 RVDIALDTFPYNGTTTTCEALWMGRPVITLAGNRHAARVSASLLAAIGCPEWIASCQEDY 578
Query: 497 VQLALQLASDVTALANLRMSLRDLMSKSPVCD----GQNFALGLESTYRN 542
V A+ LAS ALA + +LR M SP+ D G FA L + +R
Sbjct: 579 VARAIGLASRPAALAAITAALRARMLASPLLDHAGQGARFAAALRACWRE 628
>gi|330815133|ref|YP_004358838.1| hypothetical protein bgla_1g01810 [Burkholderia gladioli BSR3]
gi|327367526|gb|AEA58882.1| TPR domain protein [Burkholderia gladioli BSR3]
Length = 814
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 259/507 (51%), Gaps = 29/507 (5%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
L I P+F+++ LG+ QG++ A E +++ P + +L V + G+ +
Sbjct: 295 LQIDPDFAETHRVLGMSLLAQGRIQEAIEAGRRSVELAPNSLHVHGSLAVALSELGATAE 354
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLY-----SQY 173
A ++ + +I P N L M + ++L+ HR RF ++ +++
Sbjct: 355 AEASFRRAHEIAPRDAAMHSNLLFCMTHNPVLDAERLYAEHR----RFAEIHEAPVRARW 410
Query: 174 TSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL-VYHDYQNYKVVVYSAVVKADAKTI 232
N +DPER L IG +S D F H+VS ++ L D + VY DA T
Sbjct: 411 PRHANQRDPERQLRIGLISGDLFNHAVSSYLMPILEALKDDPTLSLHVYHNHTIEDAVTE 470
Query: 233 RFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
R R V W + G+ + ++ +R+D+IDI+++L+ HT N+L +A +PAPVQV
Sbjct: 471 RMRACVRS----WTTVAGLSDDRLVQRIRDDRIDIMMDLSNHTGRNRLPALARKPAPVQV 526
Query: 293 TWIGYPNTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP 351
TW+GYP TTGL IDY D P E ++++ E+ + LP + P+ A P+ P
Sbjct: 527 TWLGYPGTTGLDAIDYHFADRFGVPFGEMERQYSEKTVHLPAGG-TFKPAENAPPINLLP 585
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
AL NG++TFGSFN L K+ V+ VWARIL AVP SR+ + P D L
Sbjct: 586 ALHNGYVTFGSFNRLNKLRHDVIAVWARILHAVPGSRMRIGSIP--RDGGVDMLLGWFSA 643
Query: 412 LGLESLRVDLLP-----LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466
G+ R+DL P + L H H+ D LDTFPY G+TT +L+MGVP +T+
Sbjct: 644 EGISHDRLDLQPRAPAAVYLQQHHHV------DFGLDTFPYTGSTTALNALWMGVPTLTI 697
Query: 467 AGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV 526
G A G ++ VGL+ +A + D++V A+ LA D+ LA LR +R+ +S
Sbjct: 698 RGDTLASRAGAVWMSSVGLEQFVADDVDDFVARAIALAGDLKGLAALRAGMRERCRQSAG 757
Query: 527 CDGQNFALGLESTYRNMWHRYCKGDVP 553
+ A + ++R W R+C G+ P
Sbjct: 758 FQPERVAQAVSDSFRIAWRRWCAGEAP 784
>gi|384261589|ref|YP_005416775.1| hypothetical protein RSPPHO_01179 [Rhodospirillum photometricum DSM
122]
gi|378402689|emb|CCG07805.1| Putative uncharacterized protein [Rhodospirillum photometricum DSM
122]
Length = 858
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 282/550 (51%), Gaps = 12/550 (2%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNL-GVIYKDRDNLDKAVECYQMALSIK 62
+G ++ + A FY+ + +P+ A NN+ G+++K R +A + Y +S+
Sbjct: 317 MGTVLIQLRDYQEAEKFYKASLALDPNNASVLNNMAGLLFKSR-RYREAFDTYSRCVSLH 375
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + N+G + + + A E +K++ P Y EA +N+G++ + +A
Sbjct: 376 PENAMAWMNMGELARRANRPNQAMEYYKKSLEYRPDYPEAISNIGMIDIQFSDLDMAESR 435
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKD 181
+ + ++I PD N L A+NY ++LF ++ + + ++T + +
Sbjct: 436 FRRAIEIAPDMILVRDNLLFALNYKASITAEELFREYQIYNDIVEAKTEKRFTHEAHPRP 495
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
R L IGY SPD H+ +FIEA H++ + Y+ V + D T ++V
Sbjct: 496 EGRRLRIGYSSPDLRAHACLFFIEALFRCHNHDRVETFAYANVSEPDVHT----DRVKAY 551
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
W D+ ++++ +A + +D+ID+LV+L GHT N+L + +PAP+QV+++GY TT
Sbjct: 552 FDHWIDVVPMNDEAMAQRIHDDQIDVLVDLAGHTGGNRLPVFVMRPAPIQVSYLGYGYTT 611
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYT-PSPEAGPVCPTPALTNGFITF 360
GL +IDY + D PP ++ E L LP CY + PV PALT G++TF
Sbjct: 612 GLTSIDYYLGDENLTPPGSEPYFSESLWHLPPPMYCYELDESKTIPVNDLPALTKGYVTF 671
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G+ + ++ VL W RIL VPNSRL + KPF ++ R +F LE LG+ RV+
Sbjct: 672 GTLSRTIRLNDGVLLTWKRILDRVPNSRLRLDQKPFVEEATREKFWERLETLGIPRERVE 731
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L H AY +DI+LD +P+ TTT ESL+MGVP ++ VG SLL
Sbjct: 732 L----CCTRPHWAAYHDIDITLDCWPHNAGTTTLESLWMGVPVLSKTDRPSVGRVGASLL 787
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+ L + + DEYV A+ A+ + LA LR LRD + S + D ++F +E+ Y
Sbjct: 788 CPLDLGEWVVDSIDEYVDKAVAYANSLPLLAELRHQLRDRVKTSAMMDPEDFVSRIENAY 847
Query: 541 RNMWHRYCKG 550
M + G
Sbjct: 848 EQMVTTWWAG 857
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%)
Query: 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA 92
E + LG D KA+E + ALS+ P F+ + NNLG+++ + A ++A
Sbjct: 142 EIFDFLGNALAQADEKQKALESFCRALSLNPTFTSAWNNLGMMHKRFNEAPQAEFCFQRA 201
Query: 93 IAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
++ NP EA NN G L RD A Y Q L +DP + N
Sbjct: 202 LSINPKMTEALNNYGNLLRDLRRFDEAEKKYNQLLDVDPYNANG 245
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG A + + A+ + A NP A NNLG+++K + +A C+Q ALSI P
Sbjct: 147 LGNALAQADEKQKALESFCRALSLNPTFTSAWNNLGMMHKRFNEAPQAEFCFQRALSINP 206
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++LNN G + + D A + + + +P A + L L + + A + Y
Sbjct: 207 KMTEALNNYGNLLRDLRRFDEAEKKYNQLLDVDPYNANGWFGLASLRKSQRRYAEAAELY 266
Query: 124 EQCLKIDPDSRNAG---------QNRLLAMNYINE 149
+ +K + ++A Q RLL Y E
Sbjct: 267 LKTVKYRKNFQDAWLGLSSAYFFQGRLLDCKYAIE 301
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ + + A ++ A NP EA NN G + +D D+A + Y L +
Sbjct: 180 NLGMMHKRFNEAPQAEFCFQRALSINPKMTEALNNYGNLLRDLRRFDEAEKKYNQLLDVD 239
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + L + Q + AAE+ K + + +A+ L Y G + A
Sbjct: 240 PYNANGWFGLASLRKSQRRYAEAAELYLKTVKYRKNFQDAWLGLSSAYFFQGRLLDCKYA 299
Query: 123 YEQCLKIDPDSRNA 136
EQ L I+ ++ +A
Sbjct: 300 IEQALIINANNSDA 313
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G ++ +FD A Y +P+ A L + K + +A E Y + +
Sbjct: 214 NYGNLLRDLRRFDEAEKKYNQLLDVDPYNANGWFGLASLRKSQRRYAEAAELYLKTVKYR 273
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
NF + L Y QG++ IE+A+ N ++A + +G + A
Sbjct: 274 KNFQDAWLGLSSAYFFQGRLLDCKYAIEQALIINANNSDALDKMGTVLIQLRDYQEAEKF 333
Query: 123 YEQCLKIDPDS 133
Y+ L +DP++
Sbjct: 334 YKASLALDPNN 344
>gi|187925805|ref|YP_001897447.1| hypothetical protein Bphyt_3835 [Burkholderia phytofirmans PsJN]
gi|187716999|gb|ACD18223.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phytofirmans
PsJN]
Length = 790
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 285/558 (51%), Gaps = 25/558 (4%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRD-NLDKAVECYQMALSIK 62
LG+A + ++D A+ A P E+ L + + + EC ++ L+I
Sbjct: 219 LGIALHRLGRYDEALAPLRKAAELFPEELESRTVLADTLRLKGLPAETEQECRKI-LAIN 277
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ G+ QG++ +AI P + AY+ LGVL D G +S A
Sbjct: 278 PDYAEAQRIFGMSLVHQGRVAEGLAAARRAIELAPNNSTAYSTLGVLLLDLGFVSEAEKE 337
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKD 181
+ L+ DP A N L +++ E LF H ++ ++ + +Q+ N +
Sbjct: 338 FRAALEKDPKDHIAANNFLFTLSHNPEIDHGTLFAEHTNFARQHEDPVRAQWPRHVNKRS 397
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ--NYKVVVYSAVVKADAKTIRFREKVM 239
P+R L IG VS D F H+V+ ++ P++ H + N + VY+ + D T R
Sbjct: 398 PDRKLKIGLVSGDLFRHAVASYL-LPIMEHLAKDPNLSLHVYNNHIAEDDYTQLLRNCAD 456
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ W I G+ + ++A +R+++IDIL +L+GHT N+L A +PAP+QVTW+GYP
Sbjct: 457 E----WHQITGMPDAQLANKIRDERIDILFDLSGHTGRNRLLTFARKPAPIQVTWMGYPG 512
Query: 300 TTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGL +DY + D P + + E+++ LP + P A PV PA+ NG++
Sbjct: 513 TTGLSAMDYYLADKYGVPFGPAENQFSEKIVHLPSS-ATFLPEQSAPPVNILPAMHNGYV 571
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGSFN L K+ V+ +WA +L A P +++++ D + G+E R
Sbjct: 572 TFGSFNRLNKLRRDVIALWAELLRAQPTAKMLLGA--IATDEDEQLLIDWFAGEGIERER 629
Query: 419 V-----DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ +P+ L H H +DI LDTFPY G+TT SL+MGVP +T+AG A
Sbjct: 630 LMFRRRSSIPVYLQQHFH------VDICLDTFPYTGSTTVLNSLWMGVPTLTIAGDTLAS 683
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
G + ++ VGL + N++E+V + LASD+ ALA++R LR+ + S + A
Sbjct: 684 RAGTTWMSHVGLDDFVVANKEEFVARGVALASDLPALADIRTGLRERCAASAAFRPEVVA 743
Query: 534 LGLESTYRNMWHRYCKGD 551
G+ R MW R+C G+
Sbjct: 744 AGVSRALRIMWQRWCAGE 761
>gi|115350204|ref|YP_772043.1| hypothetical protein Bamb_0148 [Burkholderia ambifaria AMMD]
gi|115280192|gb|ABI85709.1| TPR repeat-containing protein [Burkholderia ambifaria AMMD]
Length = 619
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 265/522 (50%), Gaps = 27/522 (5%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
NLG + + + A EC+++A+ ++P + + NNLG + G A + +AIA
Sbjct: 103 NLGNVMQANNRPAAAAECFRLAIELRPGYVDAYNNLGNAQRLAGHAREAVDAFCQAIALQ 162
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
P + +AYNNLG D I A++AY+ + + P+ N L A +Y + F
Sbjct: 163 PDHGQAYNNLGNALLDLNEIPAALEAYQHAVALRPELPEPRSNLLFAYHYSDA------F 216
Query: 157 EAHR--DWGKRFMRLYSQ----YTSW--DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+ H D RF L +Q Y++W D RPL +G VS D H V YFIE L
Sbjct: 217 DPHAYLDEAARFDALVTQRAQPYSTWQVDLGARIGRPLRVGIVSGDLKAHPVGYFIEGML 276
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+ + ++ Y D T R + + W I G+D+ AA + +D ID+L
Sbjct: 277 AHVKRERIELHAYPTREIEDDVTARIKPRFAS----WTCIAGLDDAAAAARIHDDGIDVL 332
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
++ +GHT +N+L + A +PAP+QV+W GY +TG+ IDY + D P + VE
Sbjct: 333 IDASGHTIHNRLPLFAWKPAPLQVSWPGYFASTGMRAIDYVLGDRHVMPADEAAHFVERA 392
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP+ +LC+TP P P L NG+ TFG F LAK+T V+ VW+R+L VPN+R
Sbjct: 393 WHLPDSYLCFTPPAVELDGGPLPMLANGYPTFGYFGKLAKLTDHVIDVWSRVLRDVPNAR 452
Query: 389 LVVKC----KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
L VK P D++ RF + G+++ R+ L +++ AY +D+ L
Sbjct: 453 LFVKAPHLDDPREQDALAARFAAH----GIDAARL-LFEGRSPRDEYLAAYRRVDLMLSP 507
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
FPY G TTT E+L+MGVP + G+ ++ SLL L IA ++D YV A+ A
Sbjct: 508 FPYPGGTTTAEALWMGVPVLGRRGARFLSHICESLLQAARLPEWIADDDDAYVAKAVAFA 567
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+ LA LR +LR + SP+CD FA E MW R
Sbjct: 568 RNPAELAVLRTTLRAQVLASPLCDAPRFARHFEEALHEMWVR 609
>gi|365888932|ref|ZP_09427663.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3809]
gi|365335331|emb|CCE00194.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3809]
Length = 742
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 278/553 (50%), Gaps = 15/553 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ GVA + FD A+ A NP A G +Y++ D+A + AL+
Sbjct: 196 LFGKGVASMNLRDFDTALAALNTALAINPQAAAVLAQRGRLYQELGKFDEAEVDFDAALA 255
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P +L V +G + A +I K +A NP A+ LGV G + AI
Sbjct: 256 LEPLMEAALCGKAAVTLAKGNIALAISVINKVLAQNPKSEIAWTLLGVCAAAQGDTATAI 315
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+ Y++ L I P+ +A ++ A++++ + ++L RDW + + +
Sbjct: 316 EHYDRALAIRPNHEDAITKKIFALDFLPDTGVERLQAVRRDWWEAIGSRLERRSLGVRNI 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+R LV+GYVS D+ HS ++ L +HD + ++ YS DAKT R V +
Sbjct: 376 DPDRRLVVGYVSSDFRDHSAAFAFLPILRHHDRARFDILAYSCSPTKDAKTDLCRSLVDR 435
Query: 241 --KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+W D K+A ++ DK+DILV+L+GH+A ++L M A +PAPVQV+ +G
Sbjct: 436 FVDASLWSD------DKLADQIQADKVDILVDLSGHSAGHRLTMFARKPAPVQVSAVGSV 489
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT--PALTNG 356
TGL +DY + D + PP + E++ LP + P P P+ P+ P L NG
Sbjct: 490 TGTGLAVMDYLLADPVTIPPAVRHLFAEKIYDLPS-LITIEPPP---PIAPSSLPMLRNG 545
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+TFG+FN + K++ + +W+R++ A P S +VVK +R R ++ G+ +
Sbjct: 546 HVTFGAFNRIDKLSEPCVALWSRLMAATPGSIIVVKNHSMGDSLLRDRLIARFVAHGIAA 605
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
RV + H+ ++ +DISLD FP G +T ESL MGVP VT GS A G
Sbjct: 606 DRV-ICAGKTSREQHLAMFAEIDISLDPFPQNGGISTWESLQMGVPVVTKLGSGPAARAG 664
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+++ VGL +A++++ Y+ AL S LA LR L +++ S + + +
Sbjct: 665 GAIVKAVGLDAWVAEDDEGYLANALNFCSRPAELAALRAQLPAMVAHSAAGNNALYTQHV 724
Query: 537 ESTYRNMWHRYCK 549
E+ YR W YC+
Sbjct: 725 ETAYRTFWQDYCR 737
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV+ + + D A++ A P AEA NLG+ ++A ++ A++
Sbjct: 60 LHLLGVSERDCGRCDQAMLLLTRAVEVEPRSAEAQCNLGLALSRLGRHEEARARFERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
++PNF +L +LG + D A ++AIA P YAEAY N G+
Sbjct: 120 LQPNFPTALTHLGNALMSLFRFDEAISAHDRAIALKPDYAEAYANRGM 167
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV 78
+ +L HF A + LGV +D D+A+ A+ ++P +++ NLG+ +
Sbjct: 49 ILQDLPQHF-----AALHLLGVSERDCGRCDQAMLLLTRAVEVEPRSAEAQCNLGLALSR 103
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
G+ + A E+AIA P + A +LG AI A+++ + + PD A
Sbjct: 104 LGRHEEARARFERAIALQPNFPTALTHLGNALMSLFRFDEAISAHDRAIALKPDYAEAYA 163
Query: 139 NRLLAMNYINE 149
NR +A+ + +
Sbjct: 164 NRGMALMFTSR 174
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+A + + + A +E A P+ A +LG D+A+ + A+++K
Sbjct: 96 NLGLALSRLGRHEEARARFERAIALQPNFPTALTHLGNALMSLFRFDEAISAHDRAIALK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
P+++++ N G+ + D A + ++A++ P A GV
Sbjct: 156 PDYAEAYANRGMALMFTSRNDEAGQNFDRALSLQPRLLTALFGKGV 201
>gi|429736546|ref|ZP_19270441.1| tetratricopeptide repeat protein [Selenomonas sp. oral taxon 138
str. F0429]
gi|429154843|gb|EKX97554.1| tetratricopeptide repeat protein [Selenomonas sp. oral taxon 138
str. F0429]
Length = 571
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 249/488 (51%), Gaps = 20/488 (4%)
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPT-------YAEAYNNLGVLYRDAGSISLAIDAYEQ 125
G T + A M+E+ IAA A AY+ LG G + A++A+
Sbjct: 90 GKFRTQIAHLRAYIAMLEERIAAEDRADYHRVFLASAYSLLGEALTLTGESAEAVEAFLA 149
Query: 126 CLKIDPDSRNAG---QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
+++ N L A NY+ + R +G + ++ T+ D +
Sbjct: 150 SSRLETAREKKAIEYSNALFASNYLPSERRAAYAKLARGYGALYADVHPLSTASDARRGH 209
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+R + IGY+SPD TH V I L +D + V Y+ + D + FR V
Sbjct: 210 DR-IRIGYISPDLRTHPVGTLIRPLLTAYDRTRFAVYCYANCAE-DGLSQEFRTAV---- 263
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+WR+I G+ ++ A+V D+IDIL +L GHT +N L ++A +PAPVQVT IGY NTTG
Sbjct: 264 DVWRNICGMSAEETVALVHSDEIDILFDLAGHTQHNALPVLAHKPAPVQVTGIGYFNTTG 323
Query: 303 LPTIDYRITDSLADPPETKQ-KHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
L +DY ++D DP T EE+I LP CYT + + P G++TFG
Sbjct: 324 LAAVDYMLSDVHVDPLGTDDDAFTEEMICLPHSHFCYTLPSDLPAIALPPMERRGYVTFG 383
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
SFNN +K+T VL++W +L VP SRL++K K F R + G+ + RV+L
Sbjct: 384 SFNNFSKVTDDVLRLWGALLETVPQSRLLLKSKLFGSAEGREIAAERFTRYGIPTERVEL 443
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
H+ Y MDI+LDTFPY G TTCE+L MGVP VT+ G+ H G SLL
Sbjct: 444 RGF---GPHHLAEYGDMDIALDTFPYTGGITTCEALAMGVPVVTLCGTSHGARFGESLLI 500
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
GL LIA + YVQ+A LAS L LR +LR +++ SP+ D + + +E+ Y
Sbjct: 501 NAGLPELIAARPEGYVQIAAALASSPDPLHALRTNLRSILAHSPLTDARTYVRDVETAYM 560
Query: 542 NMWHRYCK 549
+W R+ +
Sbjct: 561 EIWERFVR 568
>gi|238926629|ref|ZP_04658389.1| tetratricopeptide TPR_2 repeat protein [Selenomonas flueggei ATCC
43531]
gi|238885575|gb|EEQ49213.1| tetratricopeptide TPR_2 repeat protein [Selenomonas flueggei ATCC
43531]
Length = 574
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 243/457 (53%), Gaps = 19/457 (4%)
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG---QNRLLAMNYINEGHDDKLF 156
A AY+ LG +AG A+ A+ +++ + N L A+NY+ L
Sbjct: 125 ASAYSLLGSALTEAGEAQEAVAAFLASAQLETERAQRAVEYSNALFAVNYLPT----HLR 180
Query: 157 EAHRDWGKRFMRLYSQYTSWDNTKDPERP---LVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
A+ + + L++ D R + IGY+SPD H V + L +D
Sbjct: 181 PAYAGLARVYDALFADVLPRAGVADAVRGHARIRIGYISPDLCVHPVGRLVRPLLTQYDR 240
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ V Y+ + DA + FR V +W +I G + AA++R D++DILV+L G
Sbjct: 241 TQFAVHCYARCAE-DALSETFRAAV----DVWHNIRGCSAAEAAALIRRDEVDILVDLAG 295
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHV-EELIRLP 332
HT N L ++A +PAPVQVT IGY NTTGL +DY ++D DPP + EE++RLP
Sbjct: 296 HTQGNALPVLAFRPAPVQVTGIGYFNTTGLSAVDYVLSDVYVDPPGAGDDAMTEEILRLP 355
Query: 333 ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
C T + PV P P G +TFGSFNN K+T +VL +W ++L AVP +RL+VK
Sbjct: 356 HSHFCCTLPDDLPPVMPPPMEQRGCVTFGSFNNFNKVTDEVLCLWRQVLDAVPGARLLVK 415
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
K F R L + G+ + RV++ + ++ Y +DI+LD FPY G T
Sbjct: 416 GKIFDHAEGRTIVAERLARCGIPAARVEMRGF---SRGYLAEYGDVDIALDPFPYTGGIT 472
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
TCE+L MGVP VT+AG+ H G SLLT L L+A+ +YV++A LASD L
Sbjct: 473 TCEALSMGVPVVTLAGASHGARFGASLLTNAHLPELVAQTPADYVRIAAGLASDPATLRA 532
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
LRM+LR ++ +P+ D + +E YR++W R+ +
Sbjct: 533 LRMNLRTMLRHAPLTDAAGYVHDVEDAYRSIWARFVR 569
>gi|387900920|ref|YP_006331259.1| hypothetical protein MYA_0159 [Burkholderia sp. KJ006]
gi|387575812|gb|AFJ84528.1| TPR domain protein, Putative component of TonB system [Burkholderia
sp. KJ006]
Length = 594
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 256/517 (49%), Gaps = 9/517 (1%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
NLG + + + A EC+++A+ ++P++ + NNLG + G A + +A+A
Sbjct: 78 NLGNVMQADNRHAAAAECFRLAIELRPDYVDAYNNLGNALRLAGNARGAVDAFCQALALK 137
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE-GHDDKL 155
P +AYNNL D I A++AY+ + + PD N L A +Y H L
Sbjct: 138 PDNGQAYNNLANALFDLNEIPAALEAYQHAVALRPDLPEPRSNLLFASHYGETFDHAAYL 197
Query: 156 FEAHRDWGKRFMRLYSQYTSW--DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
EA R + + R +T W D + RPL +G VS D +H V YFIE+ L + D
Sbjct: 198 AEAAR-YDELVTRHAKPWTDWLVDLSPRVGRPLKVGIVSGDLKSHPVGYFIESMLKHLDP 256
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
++ Y D T R + W I G+ ++ AA +R D ID+L++ G
Sbjct: 257 NRIEMHAYPTRDVEDDLTARIKPAF----STWTRIAGLSDEAAAARIRADHIDVLLDAAG 312
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
HT N+L + A +PAP+Q +W GY +TG+ IDY I D PP E LP+
Sbjct: 313 HTIYNRLPLFAWKPAPLQASWPGYFASTGVRAIDYVIGDRHVLPPAEAAHFTERPWHLPD 372
Query: 334 CFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC 393
+LC+TP E V P L NG TFG F LAKIT +V+ VW+R+L +V ++L VK
Sbjct: 373 SYLCFTPPAEPIDVGALPMLANGHPTFGYFGKLAKITDRVVAVWSRVLQSVAGAKLFVKA 432
Query: 394 KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTT 453
+ + + G+++ R+ +L +++ AY +D+ L FPY G TTT
Sbjct: 433 EHLDDPQEQQALAARFAAHGIDARRL-ILEGRAPRAEYLAAYRRVDLMLSPFPYPGGTTT 491
Query: 454 CESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANL 513
E+L+MGVP + G ++ SLL GL IA ++D YV A+ LA L
Sbjct: 492 AEALWMGVPVLCRRGDRFLSHITESLLHAAGLPDWIADDDDAYVAQAVARVGKPAELAVL 551
Query: 514 RMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
R +LR + SP+CD FA E MW ++ +
Sbjct: 552 RTTLRARLLASPLCDAPRFARHFEDALHGMWAQHVEA 588
>gi|186477742|ref|YP_001859212.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
gi|184194201|gb|ACC72166.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
Length = 626
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/581 (29%), Positives = 273/581 (46%), Gaps = 40/581 (6%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVI------------------- 41
M VA+ E +FD A Y +P+ A+A + LG+I
Sbjct: 41 MLQAAVAHHEAERFDEAETLYRQILAADPNHADAIHLLGLIAYEFGQYQTACDLIMAAIT 100
Query: 42 -------YKDRDNLDKA-------VECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
Y + N+ +A EC++ A++++P++ + NNLG AA +
Sbjct: 101 RNPNALYYYNLGNVMQAYKRPAAAAECFRQAIAMQPDYVDAHNNLGNALRAVKDHHAAVQ 160
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
+AI P +A AYNNL + + AI+A+ + + PD N L A+NY
Sbjct: 161 SFCQAINLKPDHARAYNNLANTLMELDELEAAIEAWRYAIALRPDLAEPRSNLLFALNYQ 220
Query: 148 NEGHDDKLFEAHRDWGKRFMRLYSQYTSW--DNTKDPERPLVIGYVSPDYFTHSVSYFIE 205
+ + +G + +W D RPL +G VS D H V YFIE
Sbjct: 221 QQTTPQAYLDEALKFGDAMAARAMPFQTWLADAGSREGRPLRVGIVSGDLKKHPVGYFIE 280
Query: 206 APLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKI 265
+ L D ++V Y D T R + W + G+ ++ A +R D I
Sbjct: 281 SVLANLDASRVQLVAYPTRDVEDELTARIKPSF----SAWTSLAGVADEAAAQRIRSDAI 336
Query: 266 DILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHV 325
D+L++ +GH+ +N+L + A +PAPVQV+W GY +TG+ IDY + D+ P + V
Sbjct: 337 DVLIDASGHSTHNRLPLFAWKPAPVQVSWPGYFASTGVRAIDYILGDAHVLPEAEEAHFV 396
Query: 326 EELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
E+ RLP+ +LC+TP ++ P L NG +TFG F N+ K+T + VW+ +L VP
Sbjct: 397 EKPWRLPDSYLCFTPPVDSVETGTLPMLVNGHVTFGYFGNVTKVTDHAVGVWSTLLQKVP 456
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
+S L +K F VR F+ G+ + R+ ++ D+ AY +D+ L F
Sbjct: 457 SSMLFLKSGQFDDAHVRDAFVRRFATRGIPASRL-IVEGRSARGDYFTAYRRVDMMLSPF 515
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
PY G TTT E+ +MGVP + G ++ ++ GL IA ++ +YV+ A+ A+
Sbjct: 516 PYGGGTTTAEAFWMGVPVLCRHGDRFVTHIAETICHAAGLAGWIAADDADYVEKAVAFAA 575
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
D L+ LR LR + SP+CD FA E+ MW +
Sbjct: 576 DREGLSALRSGLRAQLLASPLCDAARFARNFEAALHGMWEQ 616
>gi|148256898|ref|YP_001241483.1| SPINDLY family O-linked N-acetylglucosamine transferase
[Bradyrhizobium sp. BTAi1]
gi|146409071|gb|ABQ37577.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. BTAi1]
Length = 739
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 273/547 (49%), Gaps = 7/547 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ G+ + FD A+V + A P A G +Y +A + AL+
Sbjct: 197 FGKGLVSVNLRHFDQALVAFNAALALKPGAAAVIAQRGRLYVQMGRFKEAETDFDTALTA 256
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P +L V + ++ A ++ + NP A LG + G + AI
Sbjct: 257 EPMLEAALLGKAHVCVLTDRIAPAMAACKRVLEHNPASEIALAWLGACFARQGDTAAAIQ 316
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
+++ L+I PD +A ++ A+++ E A R+W +R + +D
Sbjct: 317 HFDRALEIKPDFDDAILKKIFALDFYPEADVAIHQAARREWWERIGAPIPRRQLAAVDRD 376
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
+R + +GYVS D+ +HS + L +HD+ ++V+ YS D+ T E+
Sbjct: 377 ADRRVTVGYVSSDFRSHSAALTFLPVLRHHDHTAFRVICYSCSPLVDSVT----EQCKAA 432
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
W D + + + ++A ++ D++DILV+L+GH+A N+L + A +PAP+QVT G T
Sbjct: 433 ADGWVDAWQLSDDELADRIQADQVDILVDLSGHSAGNRLAVFARKPAPIQVTAWGNATGT 492
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
GLPT+DY D + PP + EE+ LP + P P A P P P L NG +TFG
Sbjct: 493 GLPTMDYFFADPVTVPPAVRPLFAEEVYDLP-ALITTDPLPGAEPT-PLPMLRNGHVTFG 550
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
FN + KI+ +VL+VWA +L A+P++R+V+K +R ++ G++ R+
Sbjct: 551 VFNRIDKISAQVLKVWATLLQALPSARVVIKNGALDDAFLRDGLIARFVAHGIDESRLTC 610
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
L + +H+ A++ +D+SLD FP G +T ESL GVP V G+ A G +++
Sbjct: 611 LGSSM-RQEHIAAFADIDMSLDPFPQNGGVSTWESLQAGVPVVAKLGNSSASRAGGAIIK 669
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+GL +A+++D YV +A++ A LA LR L ++ SP D + + +E YR
Sbjct: 670 AIGLDEWVAEDDDGYVAIAIKYAGQPAELARLRAELPARVANSPAGDVKTYTRKVEEGYR 729
Query: 542 NMWHRYC 548
W RYC
Sbjct: 730 QFWRRYC 736
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG + + + D+A A P AEA NLG++ ++A + A++
Sbjct: 60 LHLLGASALDNGRLDLAEQALTRAVAVEPRNAEAQANLGLVLSSLKRYEEARAAQERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KPNF+ +L LG A E ++AIA P +A+AY N G+
Sbjct: 120 LKPNFATALTGLGNTLMNMRLFAQAIEAHDRAIALKPDFADAYCNRGM 167
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LG D LD A + A++++P +++ NLG+V + + + A
Sbjct: 54 PDHFDALHLLGASALDNGRLDLAEQALTRAVAVEPRNAEAQANLGLVLSSLKRYEEARAA 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
E+AIA P +A A LG + + AI+A+++ + + PD +A NR +A
Sbjct: 114 QERAIALKPNFATALTGLGNTLMNMRLFAQAIEAHDRAIALKPDFADAYCNRGMA 168
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ + +++ A E A P+ A A LG + +A+E + A+++K
Sbjct: 96 NLGLVLSSLKRYEEARAAQERAIALKPNFATALTGLGNTLMNMRLFAQAIEAHDRAIALK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + N G+ + + + A + E+A+A P + +A G++ + A+ A
Sbjct: 156 PDFADAYCNRGMAQLLLLRNEEARQSFERALALAPRHMQATFGKGLVSVNLRHFDQALVA 215
Query: 123 YEQCLKIDPDS 133
+ L + P +
Sbjct: 216 FNAALALKPGA 226
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
Y+ + D C Q+ L++ P+ +L+ LG G++D A + + +A+A P AE
Sbjct: 34 YRAGRHADAQAVCGQI-LALVPDHFDALHLLGASALDNGRLDLAEQALTRAVAVEPRNAE 92
Query: 102 AYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A NLG++ A A E+ + + P+
Sbjct: 93 AQANLGLVLSSLKRYEEARAAQERAIALKPN 123
>gi|172059226|ref|YP_001806878.1| hypothetical protein BamMC406_0161 [Burkholderia ambifaria MC40-6]
gi|171991743|gb|ACB62662.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
Length = 598
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 266/520 (51%), Gaps = 23/520 (4%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
NLG + + + A EC+++A+ ++P + + NNLG + G A + + IA
Sbjct: 82 NLGNVMQANNRPAAAAECFRLAIELRPGYVDAYNNLGNAQRLAGHAREAVDAFCQVIALQ 141
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
P + +AYNNLG D I A++AY+ + + P+ N L A +Y ++ D
Sbjct: 142 PDHGQAYNNLGNALLDLNEIPAALEAYQHAVALRPELPEPRSNLLFAYHY-SDAFDP--- 197
Query: 157 EAHRDWGKRFMRLYSQ----YTSW--DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
A+ D RF L +Q Y++W D + RPL +G VS D H V YFIE L +
Sbjct: 198 HAYLDEAARFDALVTQRAQPYSTWRVDLSARIGRPLRVGIVSGDLKAHPVGYFIEGMLAH 257
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
+ ++ Y D T R + + W + G+D+ AA + +D ID+L++
Sbjct: 258 VKRERVELHAYPTREIEDDVTARIKPRFAS----WTCVAGLDDAAAAARIHDDGIDVLID 313
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
+GHT +N+L + A +PAP+QV+W GY +TG+ IDY + D P + VE
Sbjct: 314 ASGHTIHNRLPLFAWKPAPLQVSWPGYFASTGMRVIDYVLGDRHVMPADEAAHFVERAWH 373
Query: 331 LPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
LP+ +LC+TP P P L N + TFG F LAK+T +V+ VW+R+L VPN+RL
Sbjct: 374 LPDSYLCFTPPAVELDCGPLPMLANSYPTFGYFGKLAKLTDRVIDVWSRVLRDVPNARLF 433
Query: 391 VKC----KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
VK P D++ RF + G+++ R+ L +++ AY +D+ L FP
Sbjct: 434 VKAPHLDDPREQDALAARFAAH----GIDAARL-LFEGRSPRDEYLAAYRRVDLMLSPFP 488
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
Y G TTT E+L+MGVP + G+ ++ SLL L IA +ED YV A+ A +
Sbjct: 489 YPGGTTTAEALWMGVPVLGRRGARFLSHICESLLHAARLPEWIADDEDTYVAKAVAFARN 548
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
LA LR +LR + SP+CD FA E MW R
Sbjct: 549 PAELAVLRTTLRAQVLASPLCDAPRFARHFEEALHEMWVR 588
>gi|83311709|ref|YP_421973.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
magneticum AMB-1]
gi|82946550|dbj|BAE51414.1| Predicted O-linked N-acetylglucosamine transferase
[Magnetospirillum magneticum AMB-1]
Length = 639
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 268/533 (50%), Gaps = 18/533 (3%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A PH L + A + + A + P+ + L +LG + G
Sbjct: 113 YRRAAALAPHLPLIHAQLARCLDAMGQAEGAADAMEAAWRLAPDDWRLLTDLGALQQQAG 172
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
++ AA + AI+ NP++A A+ NLG ++ G + A+ ++ +DP A N
Sbjct: 173 RLHAAQNSLRAAISLNPSHAAAHYNLGNVFYGEGRAAEAVACWQAAWSMDPSLGEAASNA 232
Query: 141 LLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSV 200
L ++Y+ + D++ HR +R + N DP R + +GYVS D+ H +
Sbjct: 233 LNGLHYLPDLTGDEVGRVHRRMMERDGSPPPAPHA--NAADPGRVIRVGYVSADFRRHPL 290
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
+ L HD V Y+ D T R +WR++ G+D+ +A V
Sbjct: 291 GQLMRPVLKGHDRSQVFAVCYATRPGHDEITAELRHHA----DLWREVAGLDDGALAQQV 346
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
R+D IDILV+L G TA N+LG+ A +PAPVQ++W+GYP TTGL +DY + D PPE
Sbjct: 347 RQDGIDILVDLDGQTAGNRLGLFALRPAPVQMSWLGYPFTTGLAAMDYALLDRATVPPEA 406
Query: 321 KQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARI 380
+ E ++ LP LCY PE P P+L G +TFGSFNN+AK+ +V+ WARI
Sbjct: 407 EAWFSETVLLLPGSRLCYQ-GPETPEPAPPPSLERGSVTFGSFNNIAKLNEQVIAAWARI 465
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL----PLILLNHDHMQAYS 436
L VPNSRL +K D V G++ R++L P LL Y+
Sbjct: 466 LNRVPNSRLWLKWPHLALDEVASPLRQAFAAHGVDPGRLELRGNSPPAQLLAE-----YA 520
Query: 437 LMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNE-DE 495
+DI+LD FPY G T+CE+L+MGVP VT+ G ++LL +GL+ +A+ +
Sbjct: 521 EIDIALDPFPYCGAFTSCEALWMGVPVVTLPGPRPFSRQTLALLAAMGLEDELARPDLAA 580
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
Y LA+ LA+D L LR LR LM + + D + GLE +R +W +C
Sbjct: 581 YEDLAVALAADPERLTRLRGGLRPLMRQG-IGDAEAHVAGLERVFRQVWTDWC 632
>gi|338997894|ref|ZP_08636578.1| hypothetical protein GME_07794 [Halomonas sp. TD01]
gi|338765257|gb|EGP20205.1| hypothetical protein GME_07794 [Halomonas sp. TD01]
Length = 1238
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/585 (29%), Positives = 287/585 (49%), Gaps = 43/585 (7%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG E F A+ ++ FN A +L +Y + +A++ A++++P
Sbjct: 67 LGTTLLEAGDFSAALAPLLRSYEFNAEDALMLTSLAAVYYRQGEAQQAIKHQMEAVALQP 126
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN--------------------------- 96
++ + L + G+ AA E +K++
Sbjct: 127 QYAPAQYRLAEMLQSSGQHAAALEYAQKSLELGYDELKARLLIGSLQYQTKYFSRALENY 186
Query: 97 -------PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
P YNNLG LY+D G A Y++ L PD A N + +Y
Sbjct: 187 LLLENEFPGNHSVYNNLGNLYKDMGEYKRAESYYQKALAKRPDFVMAYSNIFFSKHYDPS 246
Query: 150 GHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLV 209
+++ + + W +RF + +S +N K ++ L +G +S + TH V I A L
Sbjct: 247 VTQEEIIDFAKGWDERFSLF--KLSSPENVKKLDKSLKVGLISSGFRTHPVGQMITAALE 304
Query: 210 YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILV 269
++ + + A +D +F +K+ WR + + +K +A +R D+IDIL+
Sbjct: 305 ----RSRSDINFYAYSTSDIND-QFTKKISNVCKQWRQVRHLSQKAIAEQIRNDEIDILI 359
Query: 270 ELTGHTANNKLGMMACQPAPVQVTWIG-YPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
+L+GH + L ++ +PAP+ + W+G NT GL +IDY ++DS+ P ++ E+L
Sbjct: 360 DLSGHGDGSCLQAISMRPAPLCIKWVGGLVNTMGLESIDYLLSDSIETPEGVDDQYTEKL 419
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
IRLP+ ++CY+P A PAL N +IT G NN AKI+ ++L WA ++ +P SR
Sbjct: 420 IRLPDDYICYSPCEYAPNTTSLPALKNRYITLGCLNNAAKISAQLLGEWAILMHQLPKSR 479
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L+++ + R + + Q G+E R+ LL + + D + Y +DI+LDT+PY+
Sbjct: 480 LLLRGPLYESQDYCQRIWNEMAQHGIEQERI-LLEGPINHKDFIGTYQRIDIALDTWPYS 538
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G TTCE+L MGVP VT+ G A + L GL+ L+A + EY Q ++LA+D+
Sbjct: 539 GGLTTCEALLMGVPVVTLPGPTFAGRHSATHLINAGLQELVANSWGEYRQRVIELANDLP 598
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
LA +R LR ++ SPVCD FA + R +W RYC+G P
Sbjct: 599 NLAVIRAGLRTILHYSPVCDAPRFANHFNNALRAIWVRYCEGKAP 643
>gi|307546941|ref|YP_003899420.1| hypothetical protein HELO_4351 [Halomonas elongata DSM 2581]
gi|307218965|emb|CBV44235.1| TPR domain protein [Halomonas elongata DSM 2581]
Length = 1351
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 282/585 (48%), Gaps = 43/585 (7%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG E + + A+ A N + +L +Y + + D+AV + A+ ++P
Sbjct: 76 LGTTLLEDGRVEEALEHLHRAVDINASDPLSLTSLAAVYYRQGDHDQAVRYQRRAVELQP 135
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN--------------------------- 96
+++ + L + GK A E KA
Sbjct: 136 DYAPAQYRLAEMLQSAGKHVQALEHASKARELGYDAFRSGVLVGSLLYQTKYFSQALDIY 195
Query: 97 -------PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
P +A YNNLG LY+D G LA Y++ L+ PD A N + +Y E
Sbjct: 196 KQLERDYPGHAPIYNNLGNLYKDIGQYQLAESYYQRALEERPDYVMAYSNIFFSKHYNPE 255
Query: 150 GHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLV 209
++ + + W + F + N +DP +PL +G +S + H V I A +
Sbjct: 256 VSQQEILDFAKSWDRHFA--LPPMPAPGNPRDPAKPLRVGMISSGFRLHPVGQMI-ATAM 312
Query: 210 YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILV 269
H + YS D T + RE +WR + +D++ +A +R+D IDIL+
Sbjct: 313 EHSRPDIHFYAYSTNDHDDYVTRKIREATR----VWRPVRHLDQQALAQRIRDDGIDILI 368
Query: 270 ELTGHTANNKLGMMACQPAPVQVTWIG-YPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
+L+GH + L ++ +PAP+ + W+G N+ GL +IDY ++DS+ P ++ E+L
Sbjct: 369 DLSGHGDGSCLQAISMRPAPLCIKWVGGLVNSMGLSSIDYLLSDSIETPEGVDDQYTEKL 428
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
IRLP+ ++CY P P A PA+ NG++T G NN AK+ +L WA+++ +P SR
Sbjct: 429 IRLPDDYICYMPCPYAPATSSLPAIKNGYVTLGCLNNPAKVGATLLAEWAKLMHELPESR 488
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L+++ + + TL + G+ R+ LL + + ++ Y +DI+LD++PY+
Sbjct: 489 LLLRGAQYESEDFCRWIRETLAEHGIADYRI-LLEGPARHAEFLETYQRIDIALDSWPYS 547
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G TTCE++ MGVP VT+ G A + L GL+ L+A + DEY Q L+LA+D+
Sbjct: 548 GGLTTCEAMLMGVPVVTLPGPTFAGRHSATHLINAGLQELVAGSWDEYRQRVLELANDLP 607
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
LA +R LR ++ S VCD FA + R +W R+C P
Sbjct: 608 NLAVIRAGLRTILHYSSVCDAPRFATHFNNALRAIWQRHCDDKEP 652
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A A LG + +++A+E A+ I + SL +L VY QG D A
Sbjct: 67 PDSAFAWKALGTTLLEDGRVEEALEHLHRAVDINASDPLSLTSLAAVYYRQGDHDQAVRY 126
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137
+A+ P YA A L + + AG A++ + ++ D+ +G
Sbjct: 127 QRRAVELQPDYAPAQYRLAEMLQSAGKHVQALEHASKARELGYDAFRSG 175
>gi|292670794|ref|ZP_06604220.1| TPR domain/SEC-C domain protein [Selenomonas noxia ATCC 43541]
gi|292647415|gb|EFF65387.1| TPR domain/SEC-C domain protein [Selenomonas noxia ATCC 43541]
Length = 587
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 219/384 (57%), Gaps = 18/384 (4%)
Query: 173 YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTI 232
YT + +R L IGY+SPD+ H+VSYF+ L + + + V Y A ++DA T
Sbjct: 208 YTHDTAARSSDRKLRIGYISPDFREHAVSYFLMPFLRHFNGSRFMVFCY-ATGRSDAVTE 266
Query: 233 RFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
R R + + WRD+ G + A ++ EDKIDILV+L+GH+ ++ L +MA +PAP+QV
Sbjct: 267 RLRTRRV----TWRDLRGRSPRTAARLITEDKIDILVDLSGHSQDSALPVMAYRPAPIQV 322
Query: 293 TWIGYPNTTGLPTIDYRITDSLADPP---ETKQKHVEELIRLPECFLCYTPS-----PEA 344
+ IGY NTTGL IDY ++D + P + E+++RLP LCY P PE
Sbjct: 323 SGIGYTNTTGLRVIDYFLSDEICIPRGDVSAEAGFTEQILRLPHSHLCYAPEEIRAMPET 382
Query: 345 GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR 404
P NG++TFGSFNN AK+T ++L +W IL +V ++LV+K K DS H
Sbjct: 383 S--YEAPVRRNGYVTFGSFNNFAKVTDEILLLWRGILESVRGAKLVIKGKIASIDSGLHF 440
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
L L + RV+ P + D+++ Y +DI+LDT PY G TTCE+LYMGVP +
Sbjct: 441 AKKRLSILNYDLTRVEFRPF---SPDYLEQYRDIDIALDTAPYNGGLTTCEALYMGVPVI 497
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
+ G H G S+LT G++ L+A+N+ YV+ A+QLA + LR M KS
Sbjct: 498 ALRGRTHGARFGASILTNAGVRELVAENDINYVRRAVQLAESPKLIDGYHAGLRTSMKKS 557
Query: 525 PVCDGQNFALGLESTYRNMWHRYC 548
P+ D Q + LE+ Y +W ++C
Sbjct: 558 PLMDIQGYMNALEAAYEEIWKKFC 581
>gi|238025842|ref|YP_002910073.1| TPR domain-containing protein [Burkholderia glumae BGR1]
gi|237875036|gb|ACR27369.1| TPR domain protein [Burkholderia glumae BGR1]
Length = 790
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 171/533 (32%), Positives = 266/533 (49%), Gaps = 33/533 (6%)
Query: 38 LGVIYKD----RDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
LG +Y D + L + + +++ + +++ L + QG+ A +++
Sbjct: 248 LGTLYADVLRLANRLADSEREARRVIAVDDSHAEAWRVLNMTLLAQGRSTEAIAAGNRSV 307
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
P + Y +LGV + G+ A A+ + ++ P N L M + + +
Sbjct: 308 ELAPDSLQMYGSLGVALSELGATLEAEQAFRRAHELMPRDAAMHSNLLFCMTHDPQLDSE 367
Query: 154 KLFEAHRDWGKRFMRLY-----SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+F AHR RF ++ S++ N +DPER L +G +S D F H+VS ++ L
Sbjct: 368 TIFAAHR----RFADIHEAPVRSRWPRHPNKRDPERKLRVGIISGDLFNHAVSSYVMPIL 423
Query: 209 -VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
V H + + VY D T R R W + G+ + ++ +R D+IDI
Sbjct: 424 EVLHRDPSLSLHVYHNHTTEDGVTERMRGWTDS----WLQVAGLTDDRLVERIRSDRIDI 479
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP-PETKQKHVE 326
+++L+ HT N+L +A +PAPVQ+TW+GYP TTGL +DY D P E ++++ E
Sbjct: 480 MLDLSSHTGRNRLTALARKPAPVQITWVGYPGTTGLDAMDYYFADRYGVPFGEMERQYTE 539
Query: 327 ELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
++I LP + P A PV PAL NGF+TFGSFN L K+ +V+ VWARIL AVPN
Sbjct: 540 KIIHLPAGG-TFKPVDNAPPVNLLPALHNGFVTFGSFNRLNKLRREVIAVWARILHAVPN 598
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP-----LILLNHDHMQAYSLMDIS 441
SR+ V P L G+ R+DL P + L H H+ D
Sbjct: 599 SRMRVGSVPRVGGV--DMLLEWFTAEGIAHQRLDLQPRAPAAVYLQQHHHV------DFC 650
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY G+TT +L+MGVP +T+ G A G ++ VGL+ +A + D++V +
Sbjct: 651 LDTFPYTGSTTALNALWMGVPTLTIRGGTLASRAGAVWMSSVGLEQFVADSPDDFVARGI 710
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LA+DV LA +R LRD +SP + A + +R W R+C + P+
Sbjct: 711 ALANDVQGLAAVRRGLRDRCRQSPGFQPERIANAVSDAFRMAWRRWCADEAPA 763
>gi|357633166|ref|ZP_09131044.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. FW1012B]
gi|357581720|gb|EHJ47053.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. FW1012B]
Length = 741
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 273/555 (49%), Gaps = 28/555 (5%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG AY + + A + A P A NNLG ++ +A+ Y+ AL +
Sbjct: 198 HLGSAYLHQGQPEQAANAFRRALALRPDYPSAHNNLGNALRELGQPQEAMASYRQALRCQ 257
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + + NLG+V QG++ AA E +A+A P EA+ N ++ G I A+ A
Sbjct: 258 PNHAMAHTNLGIVLQSQGQVQAALECHARALALAPANVEAHVNYANAQKELGHIEAAVAA 317
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE-----------GHDDKLF-EAHRDWGKRFMRLY 170
Y + L +DP+ A N LL + N G D L +A R+ G
Sbjct: 318 YGRALALDPERLEARTNLLLLEAFSNRLTPQAFLAEARGLDRVLTGQADREGGA------ 371
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDY-FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
S R L +GYVS D H V +F+ L HD + +V +Y D
Sbjct: 372 ---ASLPRRARQGRRLRVGYVSGDLCGKHPVPFFLGPLLAAHDRRRVEVFLYPTQRARDD 428
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
T E++ G W + G+ +++ A VR D ID+LV+L+GHT N+LG+ A + AP
Sbjct: 429 TT----ERLQHLGDHWSPLTGLTDRQAAKRVRADGIDVLVDLSGHTRYNRLGIFARRAAP 484
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCP 349
VQ ++GY TTGL +DY I DS+ P + E RLP +LCY +
Sbjct: 485 VQAHYLGYCATTGLSAMDYWIGDSVLFPEGETPPYSETPWRLPRPYLCYDGREDLPGSAW 544
Query: 350 TPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
TP NG I FGSFN+L+KI L +W+RIL A+P +L++K + R R L+
Sbjct: 545 TP-RGNGEIWFGSFNHLSKIQDATLDLWSRILSALPEGKLLLKSGQLDHAANRERMLAAF 603
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF-PYAGTTTTCESLYMGVPCVTMAG 468
E G+ R+ L+ HM AY L+D++LD +G TTTC++L+MGVP VTMAG
Sbjct: 604 EGRGIARDRLVLMGQTANWPAHMAAYDLVDVALDPVDAVSGVTTTCDALWMGVPVVTMAG 663
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A + SL++ +G +A + Y LA+ LA DV LR R+ M SP+ D
Sbjct: 664 DRLATRMAASLVSGLGHGDWVAATPEAYAGLAVALARDVAGRTGLRSGQRERMRASPLTD 723
Query: 529 GQNFALGLESTYRNM 543
++ A LE Y M
Sbjct: 724 ARDLARCLEEAYEAM 738
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P + + LG+ R + A+E A++ PN ++LG Y QG+ + AA
Sbjct: 156 PESGKGWHLLGLSLVARGDGAAALEPLLRAVATLPNDVDLWDHLGSAYLHQGQPEQAANA 215
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+A+A P Y A+NNLG R+ G A+ +Y Q L+ P+ A N L + +
Sbjct: 216 FRRALALRPDYPSAHNNLGNALRELGQPQEAMASYRQALRCQPNHAMAHTN--LGIVLQS 273
Query: 149 EGHDDKLFEAH 159
+G E H
Sbjct: 274 QGQVQAALECH 284
>gi|281200878|gb|EFA75092.1| hypothetical protein PPL_11166 [Polysphondylium pallidum PN500]
Length = 667
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 269/485 (55%), Gaps = 22/485 (4%)
Query: 71 NLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
+LG +Y QGK A + I+ AI PT +A+ L + G + AI K
Sbjct: 194 HLGTLYAKQGKFPHANKHIDMAIKGKPTLYDAHVEKASLEQKEGETTNAIKRLSVLFKSS 253
Query: 131 PDSRNAGQNRLLA----MNYINEGHDDK-LFEAHRDWGKRFMRLYSQYTSWDNTKDPERP 185
+++ + LL MNY + +++K ++E LY ++ + +
Sbjct: 254 ETTQDLKKRALLLKIFFMNYAEQYNNEKDIYEESI--------LYHKFLNIKPYTLKQSS 305
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
+ + Y+S + H ++YF++ L H+ + +++ + S + D T +F V +K +
Sbjct: 306 IKVAYLSSHFCEHPIAYFMDGILKCHNKETFEIHLISMGTQFDDFTKKFIGYVGEKN--F 363
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMAC-QPAPVQVTWIGYPNTTGLP 304
+ G EK VAA +R+ KI IL L HT + G +A +PAP+ V ++GYPNT+G+
Sbjct: 364 HVMRGSCEK-VAAAIRDMKITILNCLDVHTERD--GEIASYRPAPIIVNYLGYPNTSGIA 420
Query: 305 T-IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPE-AGPVCP-TPALTNGFITFG 361
I YRITD ADP +TKQ E+LIR+P FLC+ S P+ +P NG+ITFG
Sbjct: 421 DLIQYRITDQYADPLDTKQLWTEKLIRMPSTFLCFDASHIITHPITAQSPFEKNGYITFG 480
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
+N L+K+ VW IL +P +R+ +K F +S +L L +G+++ RV L
Sbjct: 481 CYNTLSKVQKGTWAVWKLILDRLPTARIAIKAPLFIVESAAQAYLKKLADIGVDTTRVLL 540
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ +H +Y+ MDISLD FPY GTTT+ +SL+MGVP V+M+G H HNVG S+LT
Sbjct: 541 KTYSMETGNHYDSYNEMDISLDPFPYNGTTTSLDSLWMGVPFVSMSGVTHVHNVGRSILT 600
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
VGLK L+ N +EYV +A+QLASD L LR +LR+++SKSP+ + + F + LE Y
Sbjct: 601 NVGLKELVGSNPEEYVNIAVQLASDTEKLKYLRTNLRNILSKSPISNPKQFTIDLEDKYI 660
Query: 542 NMWHR 546
M++
Sbjct: 661 LMFNE 665
>gi|323527755|ref|YP_004229908.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
CCGE1001]
gi|323384757|gb|ADX56848.1| Tetratricopeptide repeat [Burkholderia sp. CCGE1001]
Length = 810
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 264/499 (52%), Gaps = 12/499 (2%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
L++ P+ +++ LGV GK A ++A P A +++LG LY G++ L
Sbjct: 291 LAMVPDHAEAHRILGVTLIALGKRAEAIASCQRAAELAPRSAAVHSSLGTLYLGIGAMDL 350
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDN 178
A A L+++P + N+ N L + + + L++ H +G+ + + N
Sbjct: 351 AEKALRLSLELEPTNSNSRSNLLFCLTHNSTIDKATLYKEHCVFGEIHDVPAAGNRRYPN 410
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ--NYKVVVYSAVVKADAKTIRFRE 236
++P+R L IG+VS D+ H+V+Y+ P+ H ++ N + Y D T + RE
Sbjct: 411 KRNPDRKLRIGFVSGDFCNHAVAYYF-LPIAQHLHRDPNLTLHFYYTFGLQDHMTEQLRE 469
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
+W + + + + +R+D IDI+++L+GHTA+ ++ +A +PAPVQ +WIG
Sbjct: 470 CAH----VWHPVADMSDAALVKKIRDDNIDIVIDLSGHTAHTRIVALAQKPAPVQASWIG 525
Query: 297 YPNTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN 355
YP TTG+ DY I D P E ++ E+L LP Y P P PV PAL
Sbjct: 526 YPGTTGMAAFDYYIADRFVAPIDEFTEQFTEKLALLPSS-TAYMPPPNCPPVNGLPALHK 584
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
G+IT+GSFN L K++P+V+ +W+ IL P SR+V+ D +L G++
Sbjct: 585 GYITYGSFNRLNKLSPEVIALWSTILREQPTSRMVIGAIGSKLD--EETYLEWFRNEGID 642
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
+ R+ P L +MQ + +D+ LDTFPY G+TTT +L+MGVP VTM G
Sbjct: 643 TSRLTFCPRTTLP-VYMQQHHHVDLCLDTFPYVGSTTTLNALWMGVPTVTMPGISMPSRC 701
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
G L +VGL IA+++DE+V+ +++L D+ AL+ LR+ +R+ S + A G
Sbjct: 702 GAGWLEQVGLHEFIARDKDEFVKKSIELTRDLDALSALRIGMRERCLGSVPFHPEKVAGG 761
Query: 536 LESTYRNMWHRYCKGDVPS 554
L R MW R+C + P+
Sbjct: 762 LSIALRTMWQRWCADETPT 780
>gi|422343864|ref|ZP_16424791.1| hypothetical protein HMPREF9432_00851 [Selenomonas noxia F0398]
gi|355378280|gb|EHG25471.1| hypothetical protein HMPREF9432_00851 [Selenomonas noxia F0398]
Length = 587
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 219/384 (57%), Gaps = 18/384 (4%)
Query: 173 YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTI 232
YT + +R L IGY+SPD+ H+VSYF+ L + + + V Y A ++DA T
Sbjct: 208 YTHDTAARSSDRKLRIGYISPDFREHAVSYFLMPFLRHFNGSRFMVFCY-ASGRSDAVTE 266
Query: 233 RFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
R R + + WRD+ G + A ++ EDKIDILV+L+GH+ ++ L +MA +PAP+QV
Sbjct: 267 RLRTRRV----TWRDLRGRSPRTAARLITEDKIDILVDLSGHSQDSALPVMAYRPAPIQV 322
Query: 293 TWIGYPNTTGLPTIDYRITDSLADPP---ETKQKHVEELIRLPECFLCYTPS-----PEA 344
+ IGY NTTGL IDY ++D + P + E+++RLP LCY P PE
Sbjct: 323 SGIGYTNTTGLRVIDYFLSDEICIPRGDVSAEAGFTEQILRLPHSHLCYAPEEIRAMPET 382
Query: 345 GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR 404
P NG++TFGSFNN AK+T ++L +W IL +V ++LV+K K DS H
Sbjct: 383 S--YEAPVRRNGYVTFGSFNNFAKVTDEILLLWRGILESVRGAKLVIKGKIASIDSGLHF 440
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
L L + RV+ P + D+++ Y +DI+LDT PY G TTCE+LYMGVP +
Sbjct: 441 AKKRLSILNYDLTRVEFRPF---SPDYLEQYRDIDIALDTAPYNGGLTTCEALYMGVPVI 497
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
+ G H G S+LT G++ L+A+N+ YV+ A+QLA + LR M KS
Sbjct: 498 ALRGRTHGARFGASILTNAGVRELVAENDINYVRRAVQLAESPKLIDGYHAGLRTSMKKS 557
Query: 525 PVCDGQNFALGLESTYRNMWHRYC 548
P+ D Q + LE+ Y +W ++C
Sbjct: 558 PLMDIQGYMNALEAAYEEIWKKFC 581
>gi|402303245|ref|ZP_10822342.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC9]
gi|400379180|gb|EJP32028.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC9]
Length = 589
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 221/386 (57%), Gaps = 18/386 (4%)
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
+ YT + R L IGY+SPD+ H+V+YF+ L + D + + V Y A + DA
Sbjct: 206 TSYTHENALPTEHRKLRIGYISPDFREHAVAYFLTPLLRHFDGEQFMVFCY-ATGRNDAV 264
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
T R R + + WRD+ + A ++ ED+IDILV+L+GH+ +N L +MA +PAP+
Sbjct: 265 TDRLRSRRV----TWRDLRSRSPRTAARLINEDRIDILVDLSGHSQDNALPIMAYRPAPI 320
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADP---PETKQKHVEELIRLPECFLCYTPS-----P 342
Q++ IGY NTTG+ TIDY ++D + P + E+++R+P LCY P P
Sbjct: 321 QISGIGYTNTTGVDTIDYFLSDEICIPYGDTTAESGFTEQILRMPHSHLCYAPEEIRPMP 380
Query: 343 EAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR 402
E G P NG++TFGSFNN AK+T + L +W IL +V +SRLV+K K D+ +
Sbjct: 381 ETG--FEAPVRRNGYVTFGSFNNFAKVTDETLLLWRGILESVHDSRLVIKGKICSIDAGK 438
Query: 403 HRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVP 462
L L + RV+L P + D+++ Y +DI+LDT PY G TTCE+LYMGVP
Sbjct: 439 DFLKKRLSLLSYDMTRVELRPY---SPDYLEQYRDIDIALDTAPYNGGLTTCEALYMGVP 495
Query: 463 CVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMS 522
+++ G H G S+LT G++ L+ +N+ YV+ A+QLA + LR M
Sbjct: 496 VISIRGRTHGARFGASILTNAGVRELVVENDINYVRRAVQLAESPKLIEAYHAGLRTNMK 555
Query: 523 KSPVCDGQNFALGLESTYRNMWHRYC 548
+SP+ D Q++ LE Y +W ++C
Sbjct: 556 RSPLMDMQSYMHALEDAYVEIWKKFC 581
>gi|288958771|ref|YP_003449112.1| TPR repeat-containing protein [Azospirillum sp. B510]
gi|288911079|dbj|BAI72568.1| TPR repeat-containing protein [Azospirillum sp. B510]
Length = 634
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 255/515 (49%), Gaps = 11/515 (2%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N G + + + ++ + A ++P+ N G + D A +
Sbjct: 119 NAGNLLRAQARRADSIGLNRRAAILQPDSWIPFYNTGNALAEMNRPDEADRAFRAGLCLE 178
Query: 97 PTYAEAY-NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
P+ E + N G+ I A+ A ++ L++ P + + RL M Y ++
Sbjct: 179 PSRVELWANRAGLSLAPQARIGEALAALDRALRLSPGADSLHSARLFLMQYDPAPAMPRI 238
Query: 156 FEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQN 215
+AH DWG R+ + + + + L +GYVS D+ H V YF+E L HD
Sbjct: 239 AQAHADWGARYPDRPAAPVAAPSPR-----LRVGYVSADFRAHPVGYFLEPVLAAHDRGG 293
Query: 216 YKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT 275
+ + YS DA T R R + G W D G+D+ + +R D I ILV+L GHT
Sbjct: 294 IEAICYSNTANPDAVTARLRG--LADG--WVDCAGLDDAALLERIRADGIHILVDLAGHT 349
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
N+LG+ A + APVQVTW GY TTGLP +DY I+D P +E ++R+P+ +
Sbjct: 350 LGNRLGVFARRAAPVQVTWAGYVGTTGLPAMDYLISDPRQSPEGADGWAIEGIVRMPDAY 409
Query: 336 LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 395
+ + P +A V P P + G TFG N L K+ V +W+R+L AVP +RL+++
Sbjct: 410 VPWVPPADAPAVAPLPMIARGAPTFGCLNALPKLNAPVAALWSRLLAAVPGARLLLRTPG 469
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCE 455
++R R L+ E G + R++L + + + Y +D++LD FPY+G TT E
Sbjct: 470 LDDPALRARTLALFEAAGADPARIELRG-AAPHAEFLATYGEIDVALDPFPYSGGLTTLE 528
Query: 456 SLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRM 515
+L+MGVP VT+ G V+ LT GL L + E+ YV +A L SD LA++R
Sbjct: 529 ALWMGVPVVTLGGDRFCARHSVTHLTSAGLPALAVEGEEAYVAMAAALVSDPDGLASIRG 588
Query: 516 SLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
LRD ++ SP DG F LE+ + MW R G
Sbjct: 589 RLRDRLATSPALDGVRFTRALEAAFGAMWQRAAAG 623
>gi|146342014|ref|YP_001207062.1| O-linked N-acetylglucosamine transferase [Bradyrhizobium sp. ORS
278]
gi|146194820|emb|CAL78845.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 278]
Length = 739
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 264/511 (51%), Gaps = 9/511 (1%)
Query: 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98
G +Y + A + AL+I P +L V + ++ A ++ + NP
Sbjct: 234 GRLYVQMGRFEPAEADFDAALAIDPGLETALLGKAHVCVLTERIAPAMLACKRVLEQNPA 293
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA 158
A LG + G + AI +++ L+I PD +A ++ A+++ G D + +A
Sbjct: 294 SEVALVWLGACFAKQGDTAGAIQHFDRALEIKPDFEDAILKKIFALDFY-PGADVAVHQA 352
Query: 159 -HRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYK 217
R+W +R Q +DPER + IGYVS D+ +HS + L +HD+ +K
Sbjct: 353 VRREWWERIGARIPQRQLGAIDRDPERRITIGYVSSDFRSHSAALTFLPVLRHHDHGAFK 412
Query: 218 VVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTAN 277
VV YS + D+ T E +W D + + +++ ++ D++DILV+L+GH+A
Sbjct: 413 VVCYSCSPQVDSVT----EHCKAAADVWVDAVQMSDDELSDRIQADQVDILVDLSGHSAG 468
Query: 278 NKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC 337
N+L + A +PAP+QVT G TGLPT+DY D + P + E + LP +
Sbjct: 469 NRLTVFARKPAPIQVTAWGNATGTGLPTMDYFFADPVTVPQAVRPLFAERVYDLP-ALIT 527
Query: 338 YTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC 397
P P+A P P P L NG +TFG FN + KI+ +VL VWA +L A+P++R+VVK
Sbjct: 528 TDPLPDAKPT-PLPMLRNGHVTFGVFNRVDKISDQVLNVWAALLRALPSARIVVKNGALD 586
Query: 398 CDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESL 457
+R ++ G+E R+ L + H+H+ A++ +DISLD FP G +T ESL
Sbjct: 587 DAFLRDGLIARFTAQGIEESRLTCLGSSM-RHEHIAAFAGIDISLDPFPQNGGVSTWESL 645
Query: 458 YMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSL 517
GVP V GS A G +++ +GL +A+++D Y+ +AL+ A+D LA +R L
Sbjct: 646 QAGVPVVAKLGSSAASRAGGAIVKAIGLDDWVAEDDDGYIAIALKHAADPVTLARIRAEL 705
Query: 518 RDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
D ++ S + Q + +E YR W YC
Sbjct: 706 PDQVANSAAGNVQTYTRKVEEGYRKFWRDYC 736
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG + + + D+A A P AEA NLG++ +A + A++
Sbjct: 60 LHLLGASALDSGRLDLAEQALTRAVALEPRHAEAQANLGLVLFSMKRYAEARAAQERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KPNF +L +LG A EM ++AIA P +A+AY N G+
Sbjct: 120 LKPNFVMALTSLGNTLMNMQLFAPAIEMHDRAIALKPDFADAYCNRGM 167
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LG D LD A + A++++P +++ NLG+V + A
Sbjct: 54 PDHFDALHLLGASALDSGRLDLAEQALTRAVALEPRHAEAQANLGLVLFSMKRYAEARAA 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
E+AIA P + A +LG + + AI+ +++ + + PD +A NR +A
Sbjct: 114 QERAIALKPNFVMALTSLGNTLMNMQLFAPAIEMHDRAIALKPDFADAYCNRGMA 168
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
Y+ + D C Q+ L++ P+ +L+ LG G++D A + + +A+A P +AE
Sbjct: 34 YRAGRHADAQAVCGQI-LALVPDHFDALHLLGASALDSGRLDLAEQALTRAVALEPRHAE 92
Query: 102 AYNNLGVL 109
A NLG++
Sbjct: 93 AQANLGLV 100
>gi|170698737|ref|ZP_02889802.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
IOP40-10]
gi|170136362|gb|EDT04625.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
IOP40-10]
Length = 754
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 179/607 (29%), Positives = 283/607 (46%), Gaps = 72/607 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + D A+ YE A +P A+A N G + + + D A+ CY+ A++++
Sbjct: 145 NLGNALQDKGELDAAVRAYEKAIALDPGYAQARFNQGNVLRAQRRPDDAIACYREAIALQ 204
Query: 63 PNFSQSLNNLGVVYTVQ--------------------------------GKMDAAAEMIE 90
P+ + + LGV+ + G +D +
Sbjct: 205 PDLHAAHHALGVLLFERDDLEAAIASLTRAAESGEADCLFHLAAALERAGDLDGTVASLR 264
Query: 91 KAIAANPTYAEAYNNLGVLYRDAGSISLAIDA---------------------------- 122
+A+ A P A+ +++L G A+D+
Sbjct: 265 RALVAAPDRADLHHHLAQTLVRQGKRREALDSCRIALSLPSPTAQMHAVMGDILCAMWHL 324
Query: 123 ------YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
Y++ L+IDP RNA R+ + +L R++G R S +T
Sbjct: 325 DAGLASYDRALEIDPAFRNAHSGRMFHAAGTDRLSPAQLLARAREFGTRMAAQASPHTHM 384
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
R L +G+VS D +H V+ F+ + + D + + V Y+ D T +
Sbjct: 385 PRPA-AGRVLRVGFVSGDLKSHPVAVFLLSVVAALDASHIEAVAYATQSVEDDTTAALKR 443
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
+WRDI +D++ A ++ D+ID+LV+L+GHTA+N+L + A +PAPVQ TW+G
Sbjct: 444 HF----ALWRDITALDDRAAADLIANDRIDVLVDLSGHTASNRLPLFAWKPAPVQATWLG 499
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG 356
Y TTG+ IDY I D P + VE RLP+ +LC+TP + V P PA G
Sbjct: 500 YFATTGIAAIDYVIGDRHVLPDDEAHHFVERPWRLPDSYLCFTPPAQPLDVGPLPAGREG 559
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+TFG NN KI V+ +W+R+L AVP SRL++K ++ G+ +
Sbjct: 560 VVTFGCLNNANKIGDAVVALWSRVLHAVPGSRLLLKSAQLDEAALLTSIAVRFAAHGIPA 619
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ LL H+ Y+ +DI LD FPY G TT+ E L+MG P +T G ++G
Sbjct: 620 ERL-LLRGGSKRLAHIATYNDIDIVLDPFPYPGGTTSVEGLWMGAPFITRRGDRFLSHIG 678
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
S+L +G+ IA N+D+YV A A + +A +R LR+ + +SP+CD FA L
Sbjct: 679 ESILHTLGMPEWIADNDDDYVAKAAAFAQRLPYVAAVRAGLREQLLRSPLCDAPRFARHL 738
Query: 537 ESTYRNM 543
E+ + M
Sbjct: 739 EAAFAQM 745
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG + D AI Y A P AEA +NLG +D + D A+ AL+
Sbjct: 75 LNNLGNMLRAHGRLDDAIGAYRRAIALAPGYAEAHSNLGNALRDAGDADAAMLSCAQALA 134
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P+++ NNLG +G++DAA EKAIA +P YA+A N G + R AI
Sbjct: 135 LRPDYAPGFNNLGNALQDKGELDAAVRAYEKAIALDPGYAQARFNQGNVLRAQRRPDDAI 194
Query: 121 DAYEQCLKIDPD 132
Y + + + PD
Sbjct: 195 ACYREAIALQPD 206
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+FD A V YE P +A + LG++ + + A++++ + LNNL
Sbjct: 20 RFDDARVLYEAIRRDEPDQPDATHFLGLLACQLGQFPAGLALMERAIALRAD-PVYLNNL 78
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + G++D A +AIA P YAEA++NLG RDAG A+ + Q L + PD
Sbjct: 79 GNMLRAHGRLDDAIGAYRRAIALAPGYAEAHSNLGNALRDAGDADAAMLSCAQALALRPD 138
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + D A++ A P A NNLG +D+ LD AV Y+ A+++
Sbjct: 111 NLGNALRDAGDADAAMLSCAQALALRPDYAPGFNNLGNALQDKGELDAAVRAYEKAIALD 170
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P ++Q+ N G V Q + D A +AIA P A++ LGVL + + AI
Sbjct: 171 PGYAQARFNQGNVLRAQRRPDDAIACYREAIALQPDLHAAHHALGVLLFERDDLEAAI 228
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIA-- 94
N ++ D A Y+ +P+ + + LG++ G+ A ++E+AIA
Sbjct: 10 NAAFMHHQAGRFDDARVLYEAIRRDEPDQPDATHFLGLLACQLGQFPAGLALMERAIALR 69
Query: 95 ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A+P Y NNLG + R G + AI AY + + + P A N
Sbjct: 70 ADPVY---LNNLGNMLRAHGRLDDAIGAYRRAIALAPGYAEAHSN 111
>gi|383755280|ref|YP_005434183.1| hypothetical protein SELR_24520 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367332|dbj|BAL84160.1| hypothetical protein SELR_24520 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 919
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/451 (35%), Positives = 246/451 (54%), Gaps = 20/451 (4%)
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM-NYINEGHDDKLFEA 158
A+AY+ LG R G+ AI+A+ + +PD Q +L + N I + L++
Sbjct: 479 ADAYSLLGAGLRMLGNTRSAIEAFLHSAEREPDV----QKKLTELSNAIFTA--NTLYDV 532
Query: 159 HRDWGKRFMRLYSQ---YTSWDNTKDPE---RPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
K+ LY Q S + +PE + +GY+S D+ H V + L D
Sbjct: 533 QPQEMKKMYSLYRQELLALSIKSYPEPEWKHEKIRVGYLSADWRDHPVGHLTHPLLFACD 592
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+N+ + VY +D+ T EK+ +WR++ G ++AA +R D+ID+LV+L
Sbjct: 593 EKNFVIFVYQLNANSDSVT----EKLRASRTVWREMAGKSHAEIAAQIRADEIDVLVDLG 648
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
GHTANN L ++A +PA Q++ IGY N+TG+ D +TD P E +E+++++P
Sbjct: 649 GHTANNALPVLAYKPAKKQISGIGYFNSTGMEECDGFLTDRYCSPTEFSPYFIEKMLQMP 708
Query: 333 ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
C CY P + P L NG+ITFGSFNN AK+ KVL VW +I+ VPN+RL++K
Sbjct: 709 HCHFCYQPLINMPEISAPPCLKNGYITFGSFNNFAKVNDKVLAVWQQIMELVPNARLLLK 768
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
C R L ++G+ RV++ + D++ Y +DI+LDTFPY G T
Sbjct: 769 HGLLGCAEGRAFTQQRLSRMGIPLARVEMRG---FSDDYLSQYGDVDIALDTFPYTGGVT 825
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
TCE+LYMGVP V + G+ H N G S L +GL L A E EYV+LA+ L+ D+ L +
Sbjct: 826 TCEALYMGVPVVALKGNRHGANFGYSFLANIGLSELAAATEKEYVELAVNLSYDMQLLHD 885
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
LR +LR M S + + ++ LE+ YR++
Sbjct: 886 LRKTLRHQMEGSALMNAGDYMRNLEAIYRHI 916
>gi|381160353|ref|ZP_09869585.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
gi|380878417|gb|EIC20509.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
Length = 629
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 278/540 (51%), Gaps = 16/540 (2%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
+P A + LG++ K L +A + + AL P ++LN LG+V +QG+ AA
Sbjct: 98 DPQSAWHWSYLGLLLKRAGRLAEAEQALREALERAPEEPETLNLLGIVQIMQGQPGAAET 157
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
+ +A+ + P AEA+NNLG RD + ++ A+ Q + + PD+ A N L + +
Sbjct: 158 TLRQALKSAPELAEAWNNLGTALRDLDRLDESMLAFRQAVALAPDNGRARSNLLFSQAFT 217
Query: 148 NEGHDDKLFEAHRDWGKRFM----RLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + + W + + R ++ + + ++ L +G +S ++ H V +F
Sbjct: 218 AALTPERQRQEAQLWEREVLTPNERAEARQRQFSHRPRRDQRLRLGLLSAEFGHHPVGHF 277
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
+ + L D + + + Y + + + ++ RFR+ +W I + + + A +R D
Sbjct: 278 LLSWLRALDRERFVIYCYPSHERQEPESQRFRDLA----DVWSPIDNLSDAQAAERMRAD 333
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
ID+L+E +GHT NN+LG++A + APVQ +IGY TTGL +DY I D + PPE
Sbjct: 334 GIDVLIETSGHTENNRLGVIARRAAPVQCHYIGYFATTGLTEMDYFIGDPVLIPPEHDSH 393
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTPALT---NGFITFGSFNNLAKITPKVLQVWARI 380
E++ RLP Y P +A P P +G + GSFNNL K+ + L +W+++
Sbjct: 394 FTEQVWRLPRTRYAYEPLQQA----PEPRWQPDRHGQLRLGSFNNLTKVRHESLVLWSQV 449
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L A+P +RL++K K SV+ R L L + G+ RV+ DHM AY+ DI
Sbjct: 450 LRALPQARLILKDKRALDHSVQARILGPLREQGIHPDRVEFRGASAAWSDHMDAYNDTDI 509
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
+LD+ P+ TT ++L+MG P +T+ G A SLL+ +G IA++ DE+V +
Sbjct: 510 ALDSLPFNSATTGFDALWMGTPLITLTGDRLAGRQAASLLSGLGRTEWIARDADEFVAIV 569
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH-RYCKGDVPSLKRME 559
LA D LR R M +S +CDG+ A LE + M R + +V + +R E
Sbjct: 570 TGLAQDPARGQRLREIQRAQMRQSELCDGEGLARALERSIEEMLELRPWRMEVAARRRSE 629
>gi|390569447|ref|ZP_10249732.1| TPR repeat-containing protein [Burkholderia terrae BS001]
gi|389938307|gb|EIN00151.1| TPR repeat-containing protein [Burkholderia terrae BS001]
Length = 627
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 263/548 (47%), Gaps = 8/548 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LG+ E ++ A A NP A NLG + + + A EC++ AL
Sbjct: 76 MHLLGLIAHEFGQYQTACDLIMAAITRNPQ-AFYYYNLGNVMQANNRPAAAAECFRQALV 134
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P + + NNLG A + +AI P +A AYNNL + + AI
Sbjct: 135 LQPEYVDAHNNLGNAQRALKDHHGAVQSFCQAINLKPDHARAYNNLANTLMELDELDAAI 194
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW--DN 178
+A+ +++ P+ N L A+NY + E +G+ +T+W D
Sbjct: 195 EAWRNAIELRPEFAEPRSNVLFALNYKQQTTPQAYLEEALRFGEAMDARAQPFTTWLVDA 254
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
+RPL +G VS D H V YFIE+ L D +V Y D T R +
Sbjct: 255 GSRADRPLRVGIVSGDLKKHPVGYFIESVLANLDSSRVHLVAYPTRDVEDELTARIKPAF 314
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
W + G+ ++ A +R D IDILV+ +GH+ N+L + A +PAPVQV+W GY
Sbjct: 315 ----SAWTSLAGVSDEAAAQRIRNDGIDILVDASGHSTYNRLPLFAWKPAPVQVSWPGYF 370
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
+TG+ IDY + D+ P + VE+ RLP+ +LC+TP + P L NG I
Sbjct: 371 ASTGVRAIDYILGDAHVLPEAEEAHFVEKPWRLPDSYLCFTPPGDPVETGTLPMLANGHI 430
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFG F N+ K+T V+ VW+ +L VP + L +K F VR F+ G+ + R
Sbjct: 431 TFGYFGNVTKVTDHVVGVWSTLLQKVPGATLFLKSGQFDDAHVRDSFVRRFAMRGVPASR 490
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ ++ ++ AY +D+ L FPY G TTT E+ +MGVP + G ++ +
Sbjct: 491 L-IIEGRSARDAYLAAYRRVDMMLSPFPYGGGTTTAEAFWMGVPVLVRQGDRFVTHIAET 549
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
+ GL IA ++ YV A+ A+D L+ LR +LR + SP+CD FA LE
Sbjct: 550 MCQTAGLADWIAADDAAYVDKAVAFAADRERLSALRGNLRAQLLASPLCDATRFARNLEG 609
Query: 539 TYRNMWHR 546
MW +
Sbjct: 610 ALHGMWEQ 617
>gi|188583071|ref|YP_001926516.1| hypothetical protein Mpop_3854 [Methylobacterium populi BJ001]
gi|179346569|gb|ACB81981.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium populi
BJ001]
Length = 723
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/538 (34%), Positives = 286/538 (53%), Gaps = 14/538 (2%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+ +A + P A ++LG + + A+ + A+++ P+ + + +NL +
Sbjct: 191 LFSIAIYREPDNAAFFSSLGALLIILGDNSGAIAALEKAVTLDPDLAIAHSNLSGAFQRV 250
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+A +++IA NP ++ A+ NLG + G + AI ++++ L +DP + A N
Sbjct: 251 SHHASAVSHAQRSIALNPNFSGAHINLGCGLKSLGRLPEAIASFDRALALDPRNVAAHSN 310
Query: 140 RLLAMNYINEGHDDKLFEAH-RDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTH 198
RL A Y +EG + + A R +G R + + N +DP+R L +G+VS D TH
Sbjct: 311 RLFAKLY-SEGVSPEDYAADARSFGTRLAEPLLRRRPFTNDRDPDRRLRVGFVSADLCTH 369
Query: 199 SVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
+V+ FIE + + D + ++ Y DA + R R ++ G W +I +D+ A
Sbjct: 370 AVARFIEPFMRHIDRERFETRAYMTQAGEDAVSARLR--LLFDG--WHNIAALDDDAAAD 425
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP 318
++ D IDILV+L+GH+A ++L + A +PAPVQVTWIG+P TTGL +DYR+TD D P
Sbjct: 426 LIEADAIDILVDLSGHSAGHRLLVFARKPAPVQVTWIGHPATTGLRAMDYRLTDFGHDEP 485
Query: 319 E-TKQKHVEELIRLPECFLC--YTPSPEAGPV--CPTPALTNGFITFGSFNNLAKITPKV 373
T+ H E L RLP +C Y P + PV C P NGFITFG N KI +
Sbjct: 486 GLTEVLHTETLWRLPYPLMCATYAPPEDIPPVRGC-APFEDNGFITFGVMNRFEKIGDRT 544
Query: 374 LQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQ 433
L+ WA IL A+P SRL + VR + + L + GL R+ L P + +
Sbjct: 545 LEAWAGILRALPESRLFLVAADVDKPEVRGQIEARLSRAGLPLDRIRLHPRV--TSGYYA 602
Query: 434 AYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNE 493
Y +DI+LD+FPY G TT+C++L MGVP + + GS A ++LT GL L+ +
Sbjct: 603 LYYEVDIALDSFPYNGGTTSCDTLSMGVPLIALHGSHAADRAAAAILTAAGLPELVTETR 662
Query: 494 DEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
++YV LA+ LASD L LR LR+ + SP+ D A +R MW R+ D
Sbjct: 663 EDYVALAIALASDPVRLRALRSGLRERVFASPLMDHARHAAAAGEAFRAMWRRWVDAD 720
>gi|320529019|ref|ZP_08030111.1| conserved domain protein [Selenomonas artemidis F0399]
gi|320138649|gb|EFW30539.1| conserved domain protein [Selenomonas artemidis F0399]
Length = 589
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 221/386 (57%), Gaps = 18/386 (4%)
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
+ YT + R L IGY+SPD+ H+V+YF+ L + D + + V Y A + DA
Sbjct: 206 TSYTHENALCTEHRKLRIGYISPDFREHAVAYFLTPLLRHFDGEQFMVFCY-ATGRNDAV 264
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
T R R + + WRD+ + A ++ ED+IDILV+L+GH+ +N L +MA +PAP+
Sbjct: 265 TDRLRSRRV----TWRDLRSRSPRTAARLINEDRIDILVDLSGHSQDNALPIMAYRPAPI 320
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADP---PETKQKHVEELIRLPECFLCYTPS-----P 342
Q++ IGY NTTG+ TIDY ++D + P + E+++R+P LCY P P
Sbjct: 321 QISGIGYTNTTGVDTIDYFLSDEICIPYGDTTAESGFTEQILRMPHSHLCYAPEEIRPMP 380
Query: 343 EAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR 402
E G P NG++TFGSFNN AK+T + L +W IL +V +SRLV+K K D+ +
Sbjct: 381 ETG--FEAPVRRNGYVTFGSFNNFAKVTDETLLLWRGILESVHDSRLVIKGKICSIDAGK 438
Query: 403 HRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVP 462
L L + RV+L P + D+++ Y +DI+LDT PY G TTCE+LYMGVP
Sbjct: 439 DFLKKRLSLLSYDMTRVELRPY---SPDYLEQYRDIDIALDTAPYNGGLTTCEALYMGVP 495
Query: 463 CVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMS 522
+++ G H G S+LT G++ L+ +N+ YV+ A+QLA + LR M
Sbjct: 496 VISIRGRTHGARFGASILTNAGVRELVVENDINYVRRAVQLAESPKLIEAYHAGLRTNMK 555
Query: 523 KSPVCDGQNFALGLESTYRNMWHRYC 548
+SP+ D Q++ LE Y +W ++C
Sbjct: 556 RSPLMDIQSYMRALEDAYVEIWKKFC 581
>gi|146338444|ref|YP_001203492.1| O-linked N-acetylglucosamine transferase [Bradyrhizobium sp. ORS
278]
gi|146191250|emb|CAL75255.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 278]
Length = 742
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 277/553 (50%), Gaps = 15/553 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G A+ ++ + D AI ++ A +P A N G + A+ + ++
Sbjct: 199 LINRGCAFKDLRRADEAIADFDRALALSPDDTIALINRGETFLTLKRNADALHDFDRVIA 258
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P F+ V + ++ A E ++A+A P A+A N +G + G A+
Sbjct: 259 LDPQFALGWLGRANVLMLNKQVSEALEACQRALAIEPNSAKALNQIGQCHALLGDAQAAV 318
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEG---HDDKLFEAHRDWGKRFMRLYSQYTSWD 177
++ L IDP A ++R+ ++++ G H E R G + ++ + +
Sbjct: 319 ACFDAALAIDPADEIALESRIFSLDFCEVGFAQHQAARSEWWRRIGSKIAEMHPPHHA-- 376
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
N DP+R +V+GYVS D+ HS + + HD +V+ YS DA T FR+
Sbjct: 377 NDPDPDRRIVVGYVSGDFKEHSAARTFRPVIQSHDKSQVEVICYSNSPIQDAITDTFRQA 436
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
+ WRD+ + ++A + DK+DILV+L+GH+ N+L A +PAP+QVT G+
Sbjct: 437 ADR----WRDVTQWSDDQLADCIGVDKVDILVDLSGHSRGNRLSTFARKPAPIQVTAWGH 492
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
TGL T+DY D + PPE + E++ LP + P P P +NG
Sbjct: 493 ATGTGLATMDYLFGDPVMAPPEMRHLFTEQIYDLPS-LIIIEPPPSGLRSLEAPVTSNGH 551
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+T+G+F +++ VL VWARIL A +RL+VK +++ R L+ G+
Sbjct: 552 VTYGAFTRANRLSSAVLDVWARILRADVAARLLVKDYLLSDAAIQARLLADFAARGIAPE 611
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+DL+ + +H+ A+ L+DI LD FP G + E+L+MGVP V+ G+ G
Sbjct: 612 RIDLIGPTSRD-EHLAAHRLIDIWLDPFPNGGGVSVWEALHMGVPVVSKLGNGMCSRAGG 670
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
++L+ +G+ +A ++DEYV +AL+ D L LR L DL+++ C + +E
Sbjct: 671 AILSAIGMADWVATDDDEYVDIALRATPD--RLNTLRRQLPDLIAER--CAPSVYTRAVE 726
Query: 538 STYRNMWHRYCKG 550
+ YR MW YC+G
Sbjct: 727 AAYRTMWQTYCRG 739
>gi|167590276|ref|ZP_02382664.1| TPR repeat protein [Burkholderia ubonensis Bu]
Length = 696
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/559 (31%), Positives = 271/559 (48%), Gaps = 25/559 (4%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL +++ A+ + A P +A NN G Y LD A Y+ A+++
Sbjct: 142 NLSGVRRRQMRYAEALAHAQDAIRLAPDLGDAHNNAGNAYHGLAQLDAAQAAYRKAVALN 201
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +NL VV ++D A +A+ A + NLG + R G++ A+ A
Sbjct: 202 PADAGACHNLSVVLLKLNRLDEALAYCRRALDGGAPSASMHVNLGDILRAQGNVDAAVPA 261
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD------DKLFEAHRDWGKRFMRLYSQYTSW 176
Y L + D + G +L + D L +A R +G+ ++Y
Sbjct: 262 YRDALALLRDDADDGAADVLGRLLFSAAASACVSPADYLDDARR-YGRHLAARSTRYA-- 318
Query: 177 DNTKDPE--------RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
DP RPL +G+VS D H V F+E+ L + D + VY + D
Sbjct: 319 ---HDPRERAARAQGRPLRVGFVSGDLRQHPVGIFLESVLAHLDRTRIDLRVYVTSDEED 375
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
A T R + G WR I G+ A M+ +D ID+LV+L GHT ++ L + +PA
Sbjct: 376 AITARLKPHA----GGWRSIAGLAPDAAARMIHDDGIDVLVDLAGHTQDSGLAVFGWKPA 431
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
PVQ +W+G+ +TG IDY I D+ P VE+ RLP+ +LC+TP V
Sbjct: 432 PVQASWLGFFASTGCDAIDYFIGDAHTLPDAEAHHFVEKPWRLPDSWLCFTPPAYDVAVG 491
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
P P G TFG F L KI V++ W+R+L +P +RL++K + SVR ++
Sbjct: 492 PLPMAARGHPTFGCFGKLVKIGDDVVRAWSRLLHELPAARLLLKAQELDRASVRDATIAR 551
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
+ G+++ R++ D+ AY+ +D++L FPY G TTT E+L+MGVP + M G
Sbjct: 552 FARHGIDAARLEFEGAT-PRADYFAAYNRIDVALSPFPYPGGTTTAEALWMGVPVLGMKG 610
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
S ++ S+L G+ IA +ED Y+ A+ D LA LR LR + SP+CD
Sbjct: 611 SRFVTHICESMLHAAGMGDWIADDEDAYLAKAIDAVRDRERLAALRAGLRARLLASPLCD 670
Query: 529 GQNFALGLESTYRNMWHRY 547
+ FA LE+ + MW RY
Sbjct: 671 ARRFAAQLEAAFLGMWQRY 689
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A ++ + + A Y A NP AEA +NLG + ++ D A + Y+ AL+++
Sbjct: 8 NLGNALHDLGEHEAAAASYGKAVAHNPQYAEAHSNLGNALRAQEKHDAAADAYRRALALQ 67
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + LG+V QG +D A + IAA A +NNL L RD G + A
Sbjct: 68 PGLHVARHGLGLVQWSQGALDEAVSTLR--IAAESDDASVHNNLAGLLRDTGDLDGAAAH 125
Query: 123 YEQCLKID 130
+ + +++D
Sbjct: 126 FGRAIELD 133
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYR 111
++Q+ NNLG G+ +AAA KA+A NP YAEA++NLG R
Sbjct: 1 GYAQAYNNLGNALHDLGEHEAAAASYGKAVAHNPQYAEAHSNLGNALR 48
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 5/151 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LG+ D A+ +A + A NNL + +D +LD A + A+ +
Sbjct: 75 HGLGLVQWSQGALDEAVSTLRIAAESDD--ASVHNNLAGLLRDTGDLDGAAAHFGRAIEL 132
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+ + + NL V Q + A + AI P +A+NN G Y + A
Sbjct: 133 DASMAVAHANLSGVRRRQMRYAEALAHAQDAIRLAPDLGDAHNNAGNAYHGLAQLDAAQA 192
Query: 122 AYEQCLKIDPDSRNAGQNR---LLAMNYINE 149
AY + + ++P A N LL +N ++E
Sbjct: 193 AYRKAVALNPADAGACHNLSVVLLKLNRLDE 223
>gi|383755063|ref|YP_005433966.1| hypothetical protein SELR_22350 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367115|dbj|BAL83943.1| hypothetical protein SELR_22350 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 572
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 220/376 (58%), Gaps = 17/376 (4%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
K PE+ L IGY+SPD+ H+V+ F+ L D + V YS + DA T +++M
Sbjct: 205 KLPEKKLRIGYISPDFRQHAVANFVAPLLKNFDGSRFSVYAYSTGQR-DAVT----KRLM 259
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
WRD+ G + + A ++ ED+IDILV+L+GH+ NN + +MA +PAPVQV IGY N
Sbjct: 260 ASPVTWRDLRGRNPRTAARLIAEDQIDILVDLSGHSQNNAMPIMALRPAPVQVAGIGYMN 319
Query: 300 TTGLPTIDYRITDSLADP--PETKQKHVEELIRLPECFLCYTPS-----PEAGPVCPTPA 352
TTGL TIDY ++D + P + Q E+++RLP LCY P P AG P
Sbjct: 320 TTGLSTIDYFLSDEVCLPTGEQASQGFTEKILRLPHSHLCYVPGAVREIPAAG--TEAPC 377
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL 412
L NG++TFGSFNNLAK+T + L +W IL V +S+LV+K K +S R L++L
Sbjct: 378 LKNGYVTFGSFNNLAKVTDETLLLWRGILDQVRSSKLVLKGKICSIESGRAILRDRLKRL 437
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
+ +V++ P + D+M+ Y +DI+LDT PY G TTCE+L+MGVP V++ G H
Sbjct: 438 SFDLSKVEMRPY---SPDYMEQYRDIDIALDTMPYNGGLTTCEALFMGVPVVSIRGRRHG 494
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
G S+L G+K L+ +N+ YV+ A+QL + + LR M KSP+ D + +
Sbjct: 495 SRFGASILVNAGVKELVVENDINYVRRAVQLGNSPELIGAYHSGLRANMLKSPIMDVKGY 554
Query: 533 ALGLESTYRNMWHRYC 548
LES Y +W +C
Sbjct: 555 MAELESGYCTIWRNFC 570
>gi|253996290|ref|YP_003048354.1| hypothetical protein Mmol_0918 [Methylotenera mobilis JLW8]
gi|253982969|gb|ACT47827.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8]
Length = 693
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 273/501 (54%), Gaps = 23/501 (4%)
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL++ + +Q G+V QG + AA ++AI P YA AYNNLG++ +D G ++
Sbjct: 196 ALALNQDDAQEHCYYGLVLKGQGDLVNAAATFKQAIELQPDYAAAYNNLGIVTKDMGDVA 255
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLY-SQYTSW 176
A+ Y + L I+P + N L +++ + D LF HR +G ++ +Y S +
Sbjct: 256 AAVAYYRKALAINPGYASCYSNLLFCLSHTDIVSADDLFIEHRKFGAQYEAVYKSAWPKH 315
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA--DAKTIRF 234
+ D + L +G+VS D+ HS++ F E P++ H Q + +++ A D T R
Sbjct: 316 SHQADVAKRLHVGFVSADFREHSLANFFE-PVLEHLSQVADIALHAYANNAIEDGVTQRL 374
Query: 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTW 294
+ K W + + + +A VR DKIDILV+L GHTA N+L A +PAP+Q++W
Sbjct: 375 KAKF----KYWNKVDDLTDAALAERVRADKIDILVDLDGHTAGNRLISFAMKPAPIQISW 430
Query: 295 IGYPNTTGLPTIDYRITDSLADPP-ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL 353
+GY TTGL +DY + D+ PP + Q+ E++++LP +TPS + V PAL
Sbjct: 431 LGYLATTGLTAMDYYLADAHLLPPGQFDQQFTEKIVQLP-ANAPFTPSALSPAVGALPAL 489
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
+N FITFG FN + KITP V+++W+ +L AVPNS+L++ P + + +L
Sbjct: 490 SNDFITFGCFNRVEKITPSVIKLWSGLLNAVPNSKLLLGAMP-----KDGSYDGVINELA 544
Query: 414 LESLRVDLLPLILLNH-----DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
++ D L +++H ++++ ++L+DI LDTFP G TTTC + +MGVP + + G
Sbjct: 545 SHAISADRL---IIHHRSTMDNYLKLHNLVDICLDTFPSNGVTTTCHAAWMGVPTLCLEG 601
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
++++ +GL + K+ D+++ + A + L+ +R +LR + S +
Sbjct: 602 QSLMSRGAMAVMLHLGLPEFVVKSHDDFINKGIDWAEHLQYLSEVRAALRKKFNDSALNQ 661
Query: 529 GQNFALGLESTYRNMWHRYCK 549
Q + L R MW R+CK
Sbjct: 662 PQFISENLVLALRTMWVRWCK 682
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 8 YGEMLKFDMAIV----FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
YG +LK +V ++ A P A A NNLG++ KD ++ AV Y+ AL+I P
Sbjct: 210 YGLVLKGQGDLVNAAATFKQAIELQPDYAAAYNNLGIVTKDMGDVAAAVAYYRKALAINP 269
Query: 64 NFSQSLNNL 72
++ +NL
Sbjct: 270 GYASCYSNL 278
>gi|365900836|ref|ZP_09438696.1| Tetratricopeptide TPR_2 repeat protein [Bradyrhizobium sp. STM
3843]
gi|365418400|emb|CCE11238.1| Tetratricopeptide TPR_2 repeat protein [Bradyrhizobium sp. STM
3843]
Length = 694
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 262/547 (47%), Gaps = 8/547 (1%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G+AY +FD A+ + A + +A LG+ + + +A +++A P
Sbjct: 147 GLAYVMDGQFDKAVEDLQAASTIDSQNYKAILELGMNFGVAERQQQAARLFEIAAESAPG 206
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ G Q + + +++A+A +P E + G + G + A+ AY
Sbjct: 207 VALPQYLYGHFLINQRQFERGLSYVDRALALDPLQVEHHVARGFGFLGQGRVEDAVAAYR 266
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFM-RLYSQYTSWDNTKDPE 183
+ ++DP + L A+ + D+L H+ W + + ++ N DP
Sbjct: 267 RAGELDPANAAVAGTLLFALQHKPGVTRDELLREHKRWAALYRPSAPNDRLAFSNIPDPS 326
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR--FREKVMKK 241
R +G VS D H+VS+ I + Y++V Y K D+K F E+
Sbjct: 327 RRPRLGLVSADLHRHAVSFLILRAVEQLAALGYEIVCY----KTDSKRQDDDFSERYKAV 382
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
WRD+ ++ ++A + ED +DIL +L GHTA N+L + A + AP+Q+ W GY T
Sbjct: 383 SVAWRDVSSSNDAELARQIAEDGVDILFDLAGHTAGNRLSLFAGRAAPIQLGWAGYVGTV 442
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
GL T D I D + PPE +VE IRLP+C++CY P A V P P+ T G TFG
Sbjct: 443 GLDTYDGLIADLVEVPPEHDASYVERPIRLPDCYVCYQPPTSAPDVAPLPSETAGRFTFG 502
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
FN AK+ +V + WARIL VP +R+++ S R + LE+ GL RV+L
Sbjct: 503 CFNRPAKLNAEVGKAWARILAEVPEARILMVYGGLGETSTREAVYAVLERGGLSRERVEL 562
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ ++AY +D++LD FPY+ TT E+++MGVP VT+ G A + LT
Sbjct: 563 IGES-EQAKLLEAYGQVDLALDPFPYSAGVTTLEAMWMGVPTVTLVGDTFAGRHSAAHLT 621
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
GL + D YV LA+ LA LR SLR + SP+CD FA L
Sbjct: 622 AAGLGQFCTGSIDGYVALAVDWTRRRGELAELRSSLRGRLEASPLCDAPRFADHLSRALM 681
Query: 542 NMWHRYC 548
+W +C
Sbjct: 682 QLWTEWC 688
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 2/145 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y GVA +FD A + P A A LG + + Q L +
Sbjct: 42 YCKGVALCRFDRFDDARDAFMAELRVTPTHAPALAELGTCLARTGRPREGIPYLQEGLRL 101
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PN + +LG+ + + A E +++AI + YA+AY G+ Y G A++
Sbjct: 102 LPNMPLAQYSLGLALLTENRRSEALEALDRAITLDAGYADAYRTRGLAYVMDGQFDKAVE 161
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNY 146
+ I DS+N L MN+
Sbjct: 162 DLQAASTI--DSQNYKAILELGMNF 184
>gi|385207635|ref|ZP_10034503.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderia sp. Ch1-1]
gi|385179973|gb|EIF29249.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderia sp. Ch1-1]
Length = 792
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 282/558 (50%), Gaps = 25/558 (4%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRD-NLDKAVECYQMALSIK 62
LG+A + ++D A+ A P E+ L + + + EC + L+I
Sbjct: 221 LGIALHRLGRYDEALAPLRKAAELIPEELESRTVLADTLRLKGLQAETEQECRAI-LAIN 279
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ + QG++ +AI P + Y+ LGVL D G ++ A
Sbjct: 280 PDYAEAQRIFAMSLVHQGRVAEGLAAARRAIELAPNNSSMYSTLGVLLLDLGFVAEAEKE 339
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNTKD 181
+ L+ DP A N L +++ + LF H ++ ++ + +Q+ N +
Sbjct: 340 FRAALEKDPKDHIAANNFLFTLSHNPDIDHGTLFAEHTNFARQHEDPVRAQWPRHVNKRS 399
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ--NYKVVVYSAVVKADAKTIRFREKVM 239
P+R L IG VS D F H+V+ ++ P++ H + N + VY+ + D T R+
Sbjct: 400 PDRKLKIGLVSGDLFRHAVASYL-LPIMEHLAKDPNLSLHVYNNHIAEDDYTQMLRDCAD 458
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ W+ I G+ + ++A +R+++IDIL +L+GHT N+L +PAP+QVTW+GYP
Sbjct: 459 E----WQQITGMPDAQLANKIRDERIDILFDLSGHTGRNRLLTFVRKPAPIQVTWMGYPG 514
Query: 300 TTGLPTIDYRITDSLADPPETKQK-HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTGL +DY + D P +K E+++ LP + P A PV PA+ NG++
Sbjct: 515 TTGLSAMDYYLVDKYGVPFGPAEKLFSEKIVHLPSS-ATFLPEQSAPPVNILPAMHNGYV 573
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGSFN L K+ V+ +WA +L A P +++++ D + G+E R
Sbjct: 574 TFGSFNRLNKLRRDVIALWAELLRAQPTAKMLLGA--IATDEDEQLLIDWFAGEGIERER 631
Query: 419 V-----DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ +P+ L H H +DI LDTFPY G+TT SL+MGVP +T+AG A
Sbjct: 632 LMFRRRSSIPVYLQQHFH------VDICLDTFPYTGSTTVLNSLWMGVPTLTIAGDTLAS 685
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
G + ++ VGL + I N++E+V + LASD+ ALA +R LR+ + S A
Sbjct: 686 RAGTTWMSHVGLDNFIVANKEEFVARGVALASDIPALAEIRTGLRERCAASAAFRPDVVA 745
Query: 534 LGLESTYRNMWHRYCKGD 551
G+ R MW R+C G+
Sbjct: 746 AGVSRALRIMWQRWCAGE 763
>gi|427405699|ref|ZP_18895904.1| hypothetical protein HMPREF9161_00264 [Selenomonas sp. F0473]
gi|425708540|gb|EKU71579.1| hypothetical protein HMPREF9161_00264 [Selenomonas sp. F0473]
Length = 588
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 220/391 (56%), Gaps = 18/391 (4%)
Query: 172 QYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKT 231
+Y + R L IGY+SPD+ H+V+YF+ L + D + + V Y A ++D T
Sbjct: 207 EYKHESALRTEHRKLRIGYISPDFREHAVAYFLTPLLRHFDGERFMVFCY-ATGRSDKVT 265
Query: 232 IRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQ 291
R R + + WRD+ + A +V EDKIDILV+L+GH+ +N L +MA +PAPVQ
Sbjct: 266 DRLRSRRV----TWRDLRSRSPRTSARLVNEDKIDILVDLSGHSQDNALPVMAYRPAPVQ 321
Query: 292 VTWIGYPNTTGLPTIDYRITDSLADPP---ETKQKHVEELIRLPECFLCYTPS-----PE 343
++ IGY NTTGL T+DY ++D + P + E ++RLP LCY P PE
Sbjct: 322 ISGIGYTNTTGLHTVDYFLSDEVCIPKGDTAAESGFTERILRLPHSHLCYAPEDIRTMPE 381
Query: 344 AGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH 403
+G P NG++TFGSFNN AK+T ++L +W IL +V +SR+V+K K D +
Sbjct: 382 SG--GEAPVRRNGYVTFGSFNNFAKVTDEILLLWRGILESVRDSRIVIKSKICSIDDGKD 439
Query: 404 RFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC 463
L L + RV+L P + D+++ Y +DI+LDT PY G TTCE+LYMGVP
Sbjct: 440 FLKKRLSLLNFDLSRVELRPY---SPDYLEQYRDIDIALDTAPYNGGLTTCEALYMGVPV 496
Query: 464 VTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSK 523
++M G H G S+L GL+ L+ +N+ YV+ A+QLA + LR M +
Sbjct: 497 ISMRGRTHGARFGASILINAGLRELVVENDINYVRRAVQLAESPKLIEAYHAGLRTNMKR 556
Query: 524 SPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
SP+ D +++ L Y +W +C+ P+
Sbjct: 557 SPLMDAKSYMRALGDAYMKVWKDFCEQPRPN 587
>gi|427431487|ref|ZP_18920885.1| Tetratricopeptide TPR_2 repeat protein [Caenispirillum salinarum
AK4]
gi|425877807|gb|EKV26536.1| Tetratricopeptide TPR_2 repeat protein [Caenispirillum salinarum
AK4]
Length = 720
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 260/535 (48%), Gaps = 19/535 (3%)
Query: 22 ELAFHFNPHCAEACNNL----GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYT 77
E A N AE ++ GVIY+ R L +A Y A++ ++ G+ T
Sbjct: 186 EQALEANAAVAEGDPSIDYVAGVIYRHRGRLREAALAYLRAMAAAMEADGAMVREGL--T 243
Query: 78 VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI--SLAIDAYEQCLKIDPDSRN 135
G + A + + A A A++ L + G+ ++ + +N
Sbjct: 244 PDGALSPACRRLLENAPAEQVTAPAFSELAAVLAVFGAFDDAMMLTGRAAATSARAARKN 303
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDY 195
+ L +NY + +++ + D+ R S + +RPL +GYVSPD+
Sbjct: 304 ---SELFIVNYHPDLTAEEIRAVYADFDARTPAPASPPVVPAERRTADRPLRVGYVSPDF 360
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
HS + FIE + HD + V Y+ + D T R R + WRD G+ +
Sbjct: 361 RGHSCAQFIEPVVHAHDPAAVEAVAYAELSAPDEATARIRPAFSQ----WRDTLGVSDAA 416
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
MVRED+IDILV+L GHT N+L MA +PAPVQ +WIGY TTGL IDY I D+++
Sbjct: 417 FGDMVREDRIDILVDLAGHTTGNRLQAMARKPAPVQASWIGYCYTTGLSAIDYYIGDTVS 476
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQ 375
P + E + RLP CY P P V PTPA G +TFG + ++ +V+
Sbjct: 477 SPVGCEHLFSEAVARLPFVLGCYRPPPGTPDVVPTPARQAGHVTFGCLSRAIRVNDRVIA 536
Query: 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
WA IL VP SR+V+ + F +R + + G+ + R+D I Y
Sbjct: 537 AWAEILHQVPGSRMVLNSRHFGDAFLRDLTIRRFAEHGIAAERLD----IGFTRGAWALY 592
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+ +DI LD FP+ TTT E+ +MGVP VT+ +G S+ +G L+ + E
Sbjct: 593 NQIDILLDCFPHNSGTTTFEAFWMGVPVVTVTDRPSVGRLGASVANTIGHPELVGYSVRE 652
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
Y+ +A++LA+DV AL +LR SLR ++ SP+ D F LE+ YR MW RY G
Sbjct: 653 YIAIAVRLANDVDALDSLRQSLRPAIAASPIMDAARFTRTLEAAYRGMWSRYLSG 707
>gi|392380152|ref|YP_004987310.1| conserved protein of unknown function [Azospirillum brasilense
Sp245]
gi|356882519|emb|CCD03531.1| conserved protein of unknown function [Azospirillum brasilense
Sp245]
Length = 550
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 267/539 (49%), Gaps = 15/539 (2%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
+P A N G + ++A ++ AL+++P+ + NLG G D A
Sbjct: 18 DPEEAGHALNAGAVQHRAKRPEEARAWFRRALALQPDGAAGWTNLGSHAIDAGAFDDALT 77
Query: 88 MIEKAIAANPTYAEAY--NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145
++ +A+ EA +NLGV G A+ A L P N L +
Sbjct: 78 LLRRALTLRTAEREALASSNLGVALMALGRHGEAVAALSAALDRAPGDAEVRSNLLFCLC 137
Query: 146 YINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNT-KDPERPLVIGYVSPDYFTH-SVSYF 203
+ E +F+ HR + + M + T +D +DPER L +GY+SPD+ + Y
Sbjct: 138 FAEEADLGAVFDEHRRFERAVMPVPPAATRFDAVNRDPERRLRVGYLSPDFQRYPGPGYH 197
Query: 204 IEAPLV-YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
PL+ +HD +V Y A + DA T + WR + + + ++ ++R
Sbjct: 198 FLLPLIEHHDRSAVEVTCYYADLPKDAATA----RFAALADHWRAVAALPDGELERLIRA 253
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
D ID+LV+ GH + N++ + +PAPVQV+ YPNTTGL +DY+ +D
Sbjct: 254 DGIDVLVDCGGHMSRNRMPLFIRRPAPVQVSLPLYPNTTGLTAMDYQFSDHRFAAASADA 313
Query: 323 KHVEELIRLPECFLCYTPSPEAG-PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
H E LIRLP LCY P+ A P P T G TFGSFNNL K+ L +W R+L
Sbjct: 314 LHTETLIRLPGSVLCYRPAESAATPSARPPVETAGVFTFGSFNNLTKLNASTLALWGRVL 373
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
AVP +RL++K + V R L G+E R L L D + Y L+D +
Sbjct: 374 AAVPEARLMLKWRGLSGGGVARRVLDAFAAHGVEESR---LLLRGTAPDPYEDYRLLDCA 430
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LD G TTTC++L+MGVP +++AG G ++L VGL L+ + ED+YV LA+
Sbjct: 431 LDPVFANGGTTTCDALWMGVPVLSIAGEAMISRWGATMLGSVGLGGLVVEREDDYVALAV 490
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEM 560
+LA+D L R LR+ M++SP+ D + +E+ YR W R+C G P+ R++M
Sbjct: 491 RLATDRAFLEAQRAGLRERMARSPLMDETGYVRAVEAGYRMAWRRWCAGLPPA--RIDM 547
>gi|171320362|ref|ZP_02909402.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
gi|171094409|gb|EDT39473.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
Length = 598
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 267/520 (51%), Gaps = 23/520 (4%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
NLG + + + A EC+++A+ ++P + + NNLG + G A + + IA
Sbjct: 82 NLGNVMQANNRPAAAAECFRLAIELRPGYVDAYNNLGNAQRLAGHAREAVDAFCQVIALQ 141
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
P + +AYNNLG D I A++AY+ + + P+ N L A +Y ++ D
Sbjct: 142 PEHGQAYNNLGNALLDLNEIPAALEAYQHAVALRPELPEPRSNLLFAYHY-SDAFDP--- 197
Query: 157 EAHRDWGKRFMRLYSQ----YTSW--DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
A+ D RF L +Q Y++W D + RPL +G VS D H V YFIE L +
Sbjct: 198 HAYLDEAARFDALVTQRAQPYSTWQVDLSARIGRPLRVGIVSGDLKAHPVGYFIEGMLAH 257
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
+ ++ Y D T R + + W + G+D+ AA +R+D ID+L++
Sbjct: 258 VKRERVELHAYPTREIEDDVTARIKPRFAS----WTCLAGLDDAAAAARIRDDGIDVLID 313
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
+GHT +N+L + A +PAP+QV+W GY +TG+ IDY + D P + VE
Sbjct: 314 ASGHTIHNRLPLFAWKPAPLQVSWPGYFASTGMRAIDYVLGDRHVMPADEAAHFVERAWH 373
Query: 331 LPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
LP+ +LC+TP P P L NG+ TFG F LAK+T +V+ VW+R+L VPN+RL
Sbjct: 374 LPDSYLCFTPPAIELDGGPLPMLANGYPTFGYFGKLAKLTDRVIDVWSRVLRDVPNARLF 433
Query: 391 VKC----KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
VK P D + RF + G+++ R+ L +++ AY +D+ L FP
Sbjct: 434 VKAPHLDDPREQDGLAARFAAH----GIDAARL-LFEGRSPRDEYLAAYRRVDLMLSPFP 488
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
Y G TTT E+L+MGVP + G+ ++ SLL L IA ++D YV A+ A +
Sbjct: 489 YPGGTTTAEALWMGVPVLGRRGARFLSHICESLLQAARLPEWIADDDDTYVAKAVAFARN 548
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
LA LR +LR + SP+CD FA E MW R
Sbjct: 549 PAELAVLRTTLRAQVLASPLCDAPRFARHFEEALHEMWVR 588
>gi|427400510|ref|ZP_18891748.1| hypothetical protein HMPREF9710_01344 [Massilia timonae CCUG 45783]
gi|425720550|gb|EKU83471.1| hypothetical protein HMPREF9710_01344 [Massilia timonae CCUG 45783]
Length = 731
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 288/540 (53%), Gaps = 30/540 (5%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
F+P AE +NLG++ + L ++ + AL+++P + N+L + +G++ A
Sbjct: 195 FDPDDAETLSNLGMLLMRANRLVESENVLRRALALRPGNVDAHNHLAITLAERGRLSEAQ 254
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
A+A +P + +A L ++ + G + A+ Y L+ +P+ +A N L ++
Sbjct: 255 ANANAALALDPRHEKAAITLALILQTQGRLVEAVAVYRDLLERNPEQTDAHSNMLFCLSE 314
Query: 147 INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIE- 205
+ D LF HR +GK + + + DNT +PER L +G+VS D H+V+ FIE
Sbjct: 315 MPGLTPDALFAEHRLYGKLVEQRTAPPAALDNTPEPERRLRVGFVSGDLRNHAVTSFIEP 374
Query: 206 --------APLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
L H Y N+ +V DA T R R + WRD+ +D++++
Sbjct: 375 VFERLGQRPGLTLHAYYNHTLV--------DAVTERLRGHLPH----WRDVAALDDEELE 422
Query: 258 AMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
VR D IDIL++L+GHTA N+L A + APVQ +WIGYP TTGL +DY + D
Sbjct: 423 RQVRADGIDILIDLSGHTAFNRLPAFARRLAPVQASWIGYPGTTGLAAMDYYLVDR-KFL 481
Query: 318 PETKQKH--VEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQ 375
P + H VE+L++LP + + P A V P PAL NG++TFGSFN L+K +V++
Sbjct: 482 PHGQYDHLFVEKLVQLP-LLIPFEPVASAPDVGPLPALANGYVTFGSFNRLSKFNSEVIK 540
Query: 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
W +L A+ ++RL+V P D + R + L+ G+ + RVD I LN D+++ +
Sbjct: 541 AWGMLLRALRDARLLVGGMPEQHDHAQLR--AWLDHEGIAAHRVDFHGRIGLN-DYLKLH 597
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTM-AGSVHAHNVGVSLLTKVGLKHLIAKNED 494
+D+ LDTFPY G TTT + +MGVP +T+ AG+V L L H +A + D
Sbjct: 598 QQVDLCLDTFPYPGGTTTLHAGWMGVPTLTLDAGTVTGRQTAC-FLEHCELHHFVAHSAD 656
Query: 495 EYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
++V L + D+ ALA LR +LR+ + A G+E R MW R+C+G P+
Sbjct: 657 DFVAKGLAICGDLAALAALRATLRERYALPTSDSMTRVADGIEHALRLMWRRWCQGLPPA 716
>gi|94314154|ref|YP_587363.1| hypothetical protein Rmet_5235 [Cupriavidus metallidurans CH34]
gi|93358006|gb|ABF12094.1| conserved hypothetical protein; TPR domain protein [Cupriavidus
metallidurans CH34]
Length = 797
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 268/531 (50%), Gaps = 38/531 (7%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
LS P+ + +L +LG V Q + D AA +A+ P A A+ + G++ D G ++
Sbjct: 284 LSTAPDDANTLWHLGSVLHCQKRYDEAAVAGRRAVELAPNNALAHLSFGMVQIDRGQVAE 343
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDN 178
A+ + +++D ++ L + + + L EAH +GKR + + N
Sbjct: 344 ALGHLQTAIELDSNNTKNNSAVLFRLTHCDAIDTATLTEAHFAYGKRNA-IRTSPKRHAN 402
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY---------HDYQNYKVVVYSAVVKADA 229
DP R L IG VS D + H+VS ++ A + Y H Y N+ + +
Sbjct: 403 VPDPRRKLRIGLVSGDLYNHAVSTYLGAVVEYLAKDPSVSLHFYYNFTI---------ED 453
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
+ F + W + +++ AA VR D+IDIL++L+GHT +N+L A +PAP
Sbjct: 454 EVTSF---LQAHAASWTVVTRMNDVGFAATVRRDEIDILIDLSGHTNHNRLPAFARKPAP 510
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCP 349
+QVTW+GYP TTGL +DY + D + PP E I L Y P+ + PV
Sbjct: 511 IQVTWLGYPATTGLDAMDYFLADRHSTPPGLFDAQFSEKIVLLPAVAPYCPTAASPPVNT 570
Query: 350 TPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
PAL G+IT+GSFN L K++ +V+ +WARIL A P++R+++ D+ + L+
Sbjct: 571 LPALHKGYITYGSFNRLNKVSRQVVALWARILHADPSARMIIGA--IEGDADQQTCLTRF 628
Query: 410 EQLGLESLRVDL-----LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
G+++ R+ P+ L H H +DI LDTFPY G TTT +L+MGVP V
Sbjct: 629 ADEGIDAGRLSFRTRTETPVYLQQHHH------VDICLDTFPYTGATTTINALWMGVPTV 682
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
T+AG+ S L ++GL IA + D++VQ AL L+ D+ AL LR +LR+ +
Sbjct: 683 TIAGNSPLSRGSASWLGQLGLHQYIANDADDFVQRALALSKDLDALKQLRATLRERCMHA 742
Query: 525 PVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSE 575
N A L R MW R+C G P +E +Q V P+ SE
Sbjct: 743 TSIQPANVASSLSLALRAMWERWCAGQAPDSFEIEPVQNTVA---PAAASE 790
>gi|56751457|ref|YP_172158.1| SPY protein [Synechococcus elongatus PCC 6301]
gi|56686416|dbj|BAD79638.1| SPY protein [Synechococcus elongatus PCC 6301]
Length = 639
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 263/505 (52%), Gaps = 14/505 (2%)
Query: 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
+K+ L+K + LS+ NF Q+ + ++G A ++ + I PT +
Sbjct: 127 FKELGQLEKTGQVCSQILSLDDNFWQAKLLAAEILRIKGYSGEAKVLVLELIDQQPTVGK 186
Query: 102 AYNNLGVLYRDAGSISLAIDAYEQCLKI--DPDSRNAGQNRLLAMNYINEGHDDKLFEAH 159
+N LG+ D A+ A+ + + P+ G N L + D + +AH
Sbjct: 187 FWNELGINEVDLAHEDEALSAFSKAEQYVSGPEKLIIGSNYLFEFSSGLRTAKD-ILDAH 245
Query: 160 RDWGKRFMRLYSQYTSWDNTK----DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQN 215
W K++ + Q S+ ++K I Y+S D+ THSVSYFIE L H
Sbjct: 246 LLWNKKYCK--DQGGSFQSSKFNYLKSNDKKNIAYLSGDFKTHSVSYFIEGILENHSRDA 303
Query: 216 YKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT 275
+ +++ S + D KT +F+E IW D+ + + A +V+ IDIL+EL+GHT
Sbjct: 304 FNIILLSNT-QEDEKTKKFKEL----ADIWIDLKLTNFETAAQIVKRLNIDILIELSGHT 358
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
NKL +++ + APVQ T++GY TTGL TIDY ITD++ P T + E + RLP C+
Sbjct: 359 NGNKLNLLSSRLAPVQATYLGYFATTGLSTIDYWITDNVVHPAHTVELATETIFRLPRCY 418
Query: 336 LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 395
L YTP P++ + +P + NG+ITFGSF KI+ + +W+ IL +PNS+L++K +
Sbjct: 419 LAYTPPPQSPSIAESPVIKNGYITFGSFVASRKISDYSILLWSSILSEIPNSQLLIKNRS 478
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCE 455
R + G+ S R++ L DH+ Y+ +DI+LDT+P +G TTT E
Sbjct: 479 CVSPLYRSELIEKFSLCGISSQRINFNEAKLNLEDHLALYNKVDIALDTYPASGCTTTVE 538
Query: 456 SLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRM 515
+L+MGVP +T G + SLL + L++ IA+ ++EY+ ++ + LA LR
Sbjct: 539 ALWMGVPVLTRLGELMVSRNSASLLHALNLQNWIAETDEEYIDKGIKFTQSIEQLALLRQ 598
Query: 516 SLRDLMSKSPVCDGQNFALGLESTY 540
+R+ +S + D + L LE Y
Sbjct: 599 GMRERFMQSELYDSRGLTLHLEDFY 623
>gi|81298862|ref|YP_399070.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
gi|81167743|gb|ABB56083.1| TPR repeat [Synechococcus elongatus PCC 7942]
Length = 633
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 263/505 (52%), Gaps = 14/505 (2%)
Query: 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
+K+ L+K + LS+ NF Q+ + ++G A ++ + I PT +
Sbjct: 121 FKELGQLEKTGQVCSQILSLDDNFWQAKLLAAEILRIKGYSGEAKVLVLELIDQQPTVGK 180
Query: 102 AYNNLGVLYRDAGSISLAIDAYEQCLKI--DPDSRNAGQNRLLAMNYINEGHDDKLFEAH 159
+N LG+ D A+ A+ + + P+ G N L + D + +AH
Sbjct: 181 FWNELGINEVDLAHEDEALSAFSKAEQYVSGPEKLIIGSNYLFEFSSGLRTAKD-ILDAH 239
Query: 160 RDWGKRFMRLYSQYTSWDNTK----DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQN 215
W K++ + Q S+ ++K I Y+S D+ THSVSYFIE L H
Sbjct: 240 LLWNKKYCK--DQGGSFQSSKFNYLKSNDKKNIAYLSGDFKTHSVSYFIEGILENHSRDA 297
Query: 216 YKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT 275
+ +++ S + D KT +F+E IW D+ + + A +V+ IDIL+EL+GHT
Sbjct: 298 FNIILLSNT-QEDEKTKKFKEL----ADIWIDLKLTNFETAAQIVKRLNIDILIELSGHT 352
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
NKL +++ + APVQ T++GY TTGL TIDY ITD++ P T + E + RLP C+
Sbjct: 353 NGNKLNLLSSRLAPVQATYLGYFATTGLSTIDYWITDNVVHPAHTVELATETIFRLPRCY 412
Query: 336 LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 395
L YTP P++ + +P + NG+ITFGSF KI+ + +W+ IL +PNS+L++K +
Sbjct: 413 LAYTPPPQSPSIAESPVIKNGYITFGSFVASRKISDYSILLWSSILSEIPNSQLLIKNRS 472
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCE 455
R + G+ S R++ L DH+ Y+ +DI+LDT+P +G TTT E
Sbjct: 473 CVSPLYRSELIEKFSLCGISSQRINFNEAKLNLEDHLALYNKVDIALDTYPASGCTTTVE 532
Query: 456 SLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRM 515
+L+MGVP +T G + SLL + L++ IA+ ++EY+ ++ + LA LR
Sbjct: 533 ALWMGVPVLTRLGELMVSRNSASLLHALNLQNWIAETDEEYIDKGIKFTQSIEQLALLRQ 592
Query: 516 SLRDLMSKSPVCDGQNFALGLESTY 540
+R+ +S + D + L LE Y
Sbjct: 593 GMRERFMQSELYDSRGLTLHLEDFY 617
>gi|170698732|ref|ZP_02889797.1| TPR repeat-containing protein [Burkholderia ambifaria IOP40-10]
gi|170136357|gb|EDT04620.1| TPR repeat-containing protein [Burkholderia ambifaria IOP40-10]
Length = 598
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 266/522 (50%), Gaps = 27/522 (5%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
NLG + + + A EC+++A+ ++P + + NNLG + G A + + IA
Sbjct: 82 NLGNVMQANNRPAAAAECFRLAIELRPGYVDAYNNLGNAQRLAGHAREAVDAFCQVIALQ 141
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
P + +AYNNLG D I A++AY+ + + P N L A +Y + F
Sbjct: 142 PDHGQAYNNLGNALLDLNEIPAALEAYQHAVALRPALPEPRSNLLFAYHYSDT------F 195
Query: 157 EAHR--DWGKRFMRLYSQ----YTSW--DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+ H D RF L +Q Y++W D + RPL +G VS D H V YFIE L
Sbjct: 196 DPHAYLDEAARFDALVTQRAQPYSTWQVDLSARIGRPLRVGIVSGDLKAHPVGYFIEGML 255
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+ + ++ Y D T R + + W + G+D+ AA +R+D ID+L
Sbjct: 256 AHVKRERVELHAYPTREIEDDVTARIKPRFAS----WTCLAGLDDAAAAARIRDDGIDVL 311
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
++ +GHT +N+L + A +PAP+QV+W GY +TG+ IDY + D P + VE
Sbjct: 312 IDASGHTIHNRLPLFAWKPAPLQVSWPGYFASTGMRAIDYVLGDRHVMPADEAAHFVERA 371
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP+ +LC+TP P P L NG+ TFG F LAK+T +V+ VW+R+L VPN+R
Sbjct: 372 WHLPDSYLCFTPPAVELDGGPLPMLANGYPTFGYFGKLAKLTDRVIDVWSRVLRDVPNAR 431
Query: 389 LVVKC----KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
L VK P D++ RF + G+++ R+ L +++ AY +D+ L
Sbjct: 432 LFVKAPHLDDPREQDALAARFAAH----GIDAARL-LFEGRSPRDEYLAAYQRVDLMLSP 486
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
FPY G TTT E+L+MGVP + G+ ++ SLL L IA ++D YV A+ A
Sbjct: 487 FPYPGGTTTAEALWMGVPVLGRRGARFLSHICESLLHAARLPEWIADDDDTYVAKAVAFA 546
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+ LA LR +LR + SP+CD FA E MW R
Sbjct: 547 RNPAELAVLRTTLRAQVLASPLCDAPRFARHFEEALHEMWVR 588
>gi|374292328|ref|YP_005039363.1| hypothetical protein AZOLI_1877 [Azospirillum lipoferum 4B]
gi|357424267|emb|CBS87134.1| conserved protein of unknown function; glycosyltransferase and TPR
domains [Azospirillum lipoferum 4B]
Length = 631
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 254/525 (48%), Gaps = 31/525 (5%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N G + + R ++ ++ A ++P+ L N+G ++ A +
Sbjct: 116 NAGNLLRARARRSESAALHRRAAILEPDSWIPLYNIGNALAEMNRLGEADRAYSAGLCLE 175
Query: 97 PTYAEAY-NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
P+ E + N I A+ A ++ L++ P + + RL M Y ++
Sbjct: 176 PSRVELWANRASRALAPQARIGEALAALDRALRLAPGTDSLHSARLFLMQYDPARTMPQI 235
Query: 156 FEAHRDWGKRFMRLYSQYTSWDNTKDPERP----------LVIGYVSPDYFTHSVSYFIE 205
+AH DWG R+ P+RP L +GYVS D+ H V YF+E
Sbjct: 236 AQAHADWGARY---------------PDRPATPIATPRPRLRVGYVSADFRAHPVGYFLE 280
Query: 206 APLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKI 265
L HD + + YS DA T R R G W D +D+ + +R D I
Sbjct: 281 PVLAAHDRGTIEAICYSNTANPDAVTARLR----GLAGGWVDSTAMDDAALLERIRADGI 336
Query: 266 DILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHV 325
ILV+L GHT N+LG+ + + APVQVTW GY TTGLP +DY I+D P +
Sbjct: 337 HILVDLAGHTLGNRLGVFSRRAAPVQVTWAGYVGTTGLPAMDYLISDPRQSPEGADGWAI 396
Query: 326 EELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
E ++R+P+ ++ ++P +A V P P + G TFGS N L K+ +V +W R+L AVP
Sbjct: 397 EGIVRMPDAYVPWSPPADAPAVAPLPMIARGGPTFGSLNALPKLNAQVAALWTRLLAAVP 456
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
SRL+++ +R R L+ G + R++L + + + Y +D++LD F
Sbjct: 457 ESRLLLRTPGLDDPDLRARTLALFTAAGADPERIELRG-AAPHAEFLATYGEIDVALDPF 515
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
PY+G TT E+L+MGVP VT+ G V+ LT GL L + E+ Y+ +A L S
Sbjct: 516 PYSGGLTTLEALWMGVPVVTLGGDRFCARHAVTHLTSAGLPALAVEGEEAYLAMAAALVS 575
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
D LA++R LRD ++ SP DG F LE+ + MW R G
Sbjct: 576 DSDGLASIRSRLRDRLAASPSLDGVRFTRALEAAFGAMWQRAAAG 620
>gi|421480197|ref|ZP_15927838.1| bacterial transcriptional activator domain protein [Burkholderia
multivorans CF2]
gi|400221527|gb|EJO51976.1| bacterial transcriptional activator domain protein [Burkholderia
multivorans CF2]
Length = 779
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 267/510 (52%), Gaps = 13/510 (2%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
+ L +A + + L ++P+ +++L G+V + D A +A+ P A
Sbjct: 257 NRLAEAEDVCRRLLELRPDHAEALRIHGLVLFALRRADEAIAACRRAVELAPNAAAPNGT 316
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165
LG L + G+ A+ + ++IDP + L + + ++ L HR +G+R
Sbjct: 317 LGFLLLELGATQEALGWLRRAIEIDPTDSVTHSSMLFCLAHSSDLDPQALVAEHRKFGQR 376
Query: 166 FMRLYSQYTS-WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVV--YS 222
+ + T+ + N++DPER L +G+VS D F H+V+ + P++ H + + + Y
Sbjct: 377 YEDRKRKRTAVFTNSRDPERRLRVGFVSGDLFNHAVASY-AVPVIEHLAADTGIAMHFYH 435
Query: 223 AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGM 282
V+ D + RF K G WR++ G+ + VR D+IDI+++L+GHT N+L
Sbjct: 436 NHVEEDQTSERF--KACAAG--WRNVAGMSDHAFLERVRSDRIDIMIDLSGHTGRNRLVA 491
Query: 283 MACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET-KQKHVEELIRLPECFLCYTPS 341
+A + APVQ +WIGYP TTGL +IDY +TD P + VE+++RLP + P
Sbjct: 492 LAQRAAPVQASWIGYPATTGLASIDYYLTDRFVAPHGLFDDQFVEQIVRLP-AIAPFMPP 550
Query: 342 PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
P PV PAL NG+ T+GSFN L K++P+V+ VWAR+L A P +R+ + D
Sbjct: 551 PHCPPVNALPALHNGYTTYGSFNRLNKLSPQVIAVWARVLHADPTARMALGAIGNAGD-- 608
Query: 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
+ G+++ R+ P + +MQ + +D+ LD FPY G+TTT +L+MGV
Sbjct: 609 QRTLTEWFAAAGIDASRLTFHPRSNIP-VYMQQHHGVDLCLDAFPYTGSTTTLNALWMGV 667
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P VT+ GS A L V L IAK+ED++V A+ L D AL LR LR
Sbjct: 668 PTVTIPGSTVAGRGSAGWLQHVRLDEYIAKDEDDFVAKAVALGRDTAALHVLRTGLRARC 727
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
++S A GL S R MW R+C G+
Sbjct: 728 AQSAAFRPAVVAAGLSSALRTMWRRWCAGE 757
>gi|39936977|ref|NP_949253.1| hypothetical protein RPA3916 [Rhodopseudomonas palustris CGA009]
gi|39650834|emb|CAE29357.1| TPR repeat [Rhodopseudomonas palustris CGA009]
Length = 715
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 279/548 (50%), Gaps = 16/548 (2%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI-KP 63
G A ++ ++ A+ Y+ A +P A N YKD LDKA+ Y ALSI K
Sbjct: 164 GNALHKLGRYTEALESYDKAIEIDPLSDVAFMNRAGTYKDLKQLDKALASYDRALSIGKR 223
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
L + ++ DA A + P A A LG G AI +
Sbjct: 224 PVQAGLARAETLLFMRNVKDAMA-TCTAVLKVEPNSAIALTLLGNCMASLGDAETAIALH 282
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD--WGKRFMRLYSQ-YTSWDNTK 180
+ L++ P+ A +++ +M++ G D + +A R W + +Y T N +
Sbjct: 283 SRALELMPNYEAAISSKIFSMDFC-AGSDVEAQQAVRSSWWTQIGAPIYRACATPPTNDR 341
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+R LV+GYVS D+ HS ++ + +HD+ ++VV+YS VV D T F E +
Sbjct: 342 DPDRRLVVGYVSADFRAHSAAFSFRPVIEHHDHNQFEVVLYSGVVVPDDSTRAF-EAIAD 400
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
K WRD + ++ +A ++EDK+DILV+L+GH+ N+L + A +PAPVQVT G+
Sbjct: 401 K---WRDATLMSDQGLADQIKEDKVDILVDLSGHSNGNRLRVFARKPAPVQVTAWGHATG 457
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP +DY + D +A P E + + E + LP + P P+ P NG++T+
Sbjct: 458 TGLPVMDYLLGDPVAIPVEDRHFYAEAVYDLPSIVII-EPVPQQWRSLELPFDRNGYLTY 516
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GS N ++KI+ ++VW+++L A P SRL++K +VR L G+ + R+
Sbjct: 517 GSLNRISKISDAAIEVWSQVLAASPTSRLILKDHQIDDPAVRQTLLEKFGARGIAAGRIT 576
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LL DH++ +D+ LD FP AG +T E+L+MGVP V+ G VG ++L
Sbjct: 577 LLG-SSSRQDHLETLKQIDLCLDPFPQAGGVSTWEALHMGVPVVSRLGHTVPSRVGCAVL 635
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
GL IA N+ Y+++A + ++ L ++R LRD + + C + +E Y
Sbjct: 636 AAAGLPDFIAPNDARYIEIASK--PELERLRSIRRGLRDFILQR--CGPAAYTRAVEDAY 691
Query: 541 RNMWHRYC 548
R MW R+C
Sbjct: 692 RTMWKRWC 699
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
++ I + A +P A+A +++G + ++ A++I P + N G+
Sbjct: 72 ELGIKTLKRALLADPKSAQAQSDMGSMLIAVGRFADSLASCDKAIAIDPTLMLAYANRGL 131
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
+ + + A +KAI P A+ +N+ G G + A+++Y++ ++IDP S
Sbjct: 132 ALSALARYEDAIASFDKAIELMPDRADTWNDRGNALHKLGRYTEALESYDKAIEIDPLSD 191
Query: 135 NAGQNR 140
A NR
Sbjct: 192 VAFMNR 197
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Query: 9 GEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G ML +F ++ + A +P A N G+ + A+ + A+ + P+
Sbjct: 96 GSMLIAVGRFADSLASCDKAIAIDPTLMLAYANRGLALSALARYEDAIASFDKAIELMPD 155
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ + N+ G G+ A E +KAI +P A+ N Y+D + A+ +Y+
Sbjct: 156 RADTWNDRGNALHKLGRYTEALESYDKAIEIDPLSDVAFMNRAGTYKDLKQLDKALASYD 215
Query: 125 QCLKIDPDSRNAGQNR---LLAMNYINEG 150
+ L I AG R LL M + +
Sbjct: 216 RALSIGKRPVQAGLARAETLLFMRNVKDA 244
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
N + ++ + AL P +Q+ +++G + G+ + +KAIA +PT AY N
Sbjct: 70 NAELGIKTLKRALLADPKSAQAQSDMGSMLIAVGRFADSLASCDKAIAIDPTLMLAYANR 129
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
G+ AI ++++ +++ PD + +R A++ +
Sbjct: 130 GLALSALARYEDAIASFDKAIELMPDRADTWNDRGNALHKLGR 172
>gi|456354099|dbj|BAM88544.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Agromonas oligotrophica S58]
Length = 739
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/527 (30%), Positives = 266/527 (50%), Gaps = 17/527 (3%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
PH A+ G +++ D A+ + AL+I P +L + ++ + A
Sbjct: 222 IRPHAAQVLAQRGRLHQQAGRFDPAMADFTAALAIDPRQDMALLGFAQLSVIKDNIAPAM 281
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
+ K + NP A+ LG + G ++ A+ +E+ L+I PD +A ++ +++
Sbjct: 282 DACRKVLEQNPESEVAWTWLGECFCKQGDLATALQHFERALEIKPDFGDAITAKIFLLDF 341
Query: 147 INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
+ + + R+W R ++ +DPER L IGYVS D+ HS +
Sbjct: 342 MPDTDFAQHQAVRREWWTRIGSKITRRPPPLRDRDPERRLTIGYVSSDFRNHSAALVFLP 401
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
L +HD++ +KVV YS D T E+ +W D + + ++++ + D++D
Sbjct: 402 VLRHHDHKAFKVVCYSCSPLQDGMT----ERCRAAADLWVDAWQMSDEELTDRIAADEVD 457
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
ILV+L+GH+A N+L + A +PAPVQVT G TGLPTIDY D + P E + E
Sbjct: 458 ILVDLSGHSAGNRLPVFARKPAPVQVTAWGSGTGTGLPTIDYFFADPVTVPEEARPLFAE 517
Query: 327 ELIRLPECFLCYTPSPEAG-PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
++ LP T P G P P L NG++TFG FN + KI+ L +W+R++ A+P
Sbjct: 518 QVYDLPAVI---TTDPLQGWQPTPLPMLRNGYVTFGVFNRIDKISDPALALWSRLMGALP 574
Query: 386 NSRLVVKC----KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
+SR+V+K +P D + RF++ G+ R+ L L + H+ ++ +D+S
Sbjct: 575 DSRIVIKNGALDEPLLRDGLVARFVAH----GIAQERITCLGLSTRDQ-HIAQFAAIDMS 629
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LD FP G +T ESL GVP + G A ++ T VGL +A+++D Y+ +AL
Sbjct: 630 LDPFPQNGGVSTWESLQAGVPVIAKLGHGAAARAAAAINTAVGLGEFVAEDDDGYIAIAL 689
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+ A+ LA LR L +++ S D + + +E YR WH YC
Sbjct: 690 RYAAQPAELAKLRAELPAMVAGSAAGDVETYTRKVEEGYRLFWHHYC 736
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV + + D+A A +P AEA +NLG+ +R + A +C + A++
Sbjct: 60 LHLLGVVALDGGQLDLAEQALTKAVEIDPRHAEALSNLGLALFNRKRFEDARKCQERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPN +L LG G+ + A ++AIA P YA+AY N G+ A
Sbjct: 120 LKPNMVVALTGLGNTLMRLGRPEEAIAAHDRAIALKPDYADAYCNRGMALLPLARNVEAN 179
Query: 121 DAYEQCLKIDP 131
++++ L ++P
Sbjct: 180 QSFDRALSLNP 190
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LGV+ D LD A + A+ I P +++L+NLG+ + + + A +
Sbjct: 54 PDHFDALHLLGVVALDGGQLDLAEQALTKAVEIDPRHAEALSNLGLALFNRKRFEDARKC 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
E+AIA P A LG G AI A+++ + + PD +A NR +A+
Sbjct: 114 QERAIALKPNMVVALTGLGNTLMRLGRPEEAIAAHDRAIALKPDYADAYCNRGMAL 169
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
C Q+ L++ P+ +L+ LGVV G++D A + + KA+ +P +AEA +NLG+ +
Sbjct: 46 CGQV-LALLPDHFDALHLLGVVALDGGQLDLAEQALTKAVEIDPRHAEALSNLGLALFNR 104
Query: 114 GSISLAIDAYEQCLKIDPD 132
A E+ + + P+
Sbjct: 105 KRFEDARKCQERAIALKPN 123
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+A +F+ A E A P+ A LG ++A+ + A++
Sbjct: 94 LSNLGLALFNRKRFEDARKCQERAIALKPNMVVALTGLGNTLMRLGRPEEAIAAHDRAIA 153
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KP+++ + N G+ + A + ++A++ NP + EA G+
Sbjct: 154 LKPDYADAYCNRGMALLPLARNVEANQSFDRALSLNPRHMEAMFGKGL 201
>gi|86750910|ref|YP_487406.1| hypothetical protein RPB_3801 [Rhodopseudomonas palustris HaA2]
gi|86573938|gb|ABD08495.1| TPR repeat protein [Rhodopseudomonas palustris HaA2]
Length = 713
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 268/547 (48%), Gaps = 14/547 (2%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI-KP 63
G A ++ ++D A+ Y A +P A N K+ D A+ Y ALSI K
Sbjct: 164 GNALHKLGRYDEALNSYAQAIRIDPLHDVAFMNQATTLKEMKQFDLALASYDRALSIGKR 223
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ ++ ++ ++ A + P + A LG G A +
Sbjct: 224 PIDAGIARADLLLQMK-NVEGALATCTALLKIEPDFVPALTLLGNCMASLGDADTATALH 282
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTS-WDNTKD 181
+ L + PD A +R+ +M++ ++ A DW K RLY + + N +D
Sbjct: 283 GRALALKPDYEPAISSRIFSMDFCSDADFQSQQAARADWWKHVGARLYKSHAAPLANDRD 342
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
PER LV+GYVS D+ HS ++ + HD +V+ YS VV DA T F E + +
Sbjct: 343 PERRLVVGYVSADFRQHSAAFSFRPVIENHDRTQVEVICYSGVVLPDAATKSF-EAIADR 401
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
WRD + ++A +R DK+DIL++L+GH+A N+L + A +PAPVQVT G+ T
Sbjct: 402 ---WRDSSQWTDARLADTIRADKVDILIDLSGHSAGNRLRVFARKPAPVQVTAWGHATGT 458
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
GLP IDY + D +A P E +Q + E + LP + P P P NG++T+G
Sbjct: 459 GLPVIDYLLADPVAVPNEVRQFYAEAIYDLPSIVII-EPPPAGLHATELPFDRNGYLTYG 517
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
S N ++KI+ + WARI+ P SRL++K +VR L G+ + R+ L
Sbjct: 518 SLNRISKISDAAIAAWARIMTGNPTSRLILKDHQIDDPAVRQTLLDKFAAQGIAAERLTL 577
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
L +H++ +D+ LD FP AG +T E+L+MGVP V+ G+ A VG ++L+
Sbjct: 578 LGST-SRQEHLETLQQIDLGLDPFPQAGGVSTWEALHMGVPVVSRLGNTVASRVGSAILS 636
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
GL IA +E+ Y+ +AL D L +R L +++ C + +E YR
Sbjct: 637 AAGLPDFIATSEERYIAIALD--PDRERLRAIRRGLPAFIAER--CGPAAYTRAVEDAYR 692
Query: 542 NMWHRYC 548
MW R+C
Sbjct: 693 TMWRRWC 699
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+A + FD I + A +P A+A ++LG + D+A+ A++
Sbjct: 58 LHFLGLAEFQTGHFDAGIRSLKRALIEDPKSAQAQSDLGSVLNAAQRYDEALVACDKAIA 117
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + + N G V G+ D A +++A+ P + + +N+ G G A+
Sbjct: 118 LDPALAFAHANRGNVLITLGRYDEAVASLDRALELVPDHTDTWNDRGNALHKLGRYDEAL 177
Query: 121 DAYEQCLKIDP 131
++Y Q ++IDP
Sbjct: 178 NSYAQAIRIDP 188
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG ++D A+V + A +P A A N G + D+AV AL +
Sbjct: 94 DLGSVLNAAQRYDEALVACDKAIALDPALAFAHANRGNVLITLGRYDEAVASLDRALELV 153
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + + N+ G G+ D A +AI +P + A+ N ++ LA+ +
Sbjct: 154 PDHTDTWNDRGNALHKLGRYDEALNSYAQAIRIDPLHDVAFMNQATTLKEMKQFDLALAS 213
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y++ L I +AG R
Sbjct: 214 YDRALSIGKRPIDAGIAR 231
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
++D A Y+ +P+ +A + LG+ + D + + AL P +Q+ ++L
Sbjct: 36 QYDEAKSAYKKVLKKSPNNFQALHFLGLAEFQTGHFDAGIRSLKRALIEDPKSAQAQSDL 95
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G V + D A +KAIA +P A A+ N G + G A+ + ++ L++ PD
Sbjct: 96 GSVLNAAQRYDEALVACDKAIALDPALAFAHANRGNVLITLGRYDEAVASLDRALELVPD 155
Query: 133 SRNAGQNRLLAMNYINE 149
+ +R A++ +
Sbjct: 156 HTDTWNDRGNALHKLGR 172
>gi|192292805|ref|YP_001993410.1| hypothetical protein Rpal_4439 [Rhodopseudomonas palustris TIE-1]
gi|192286554|gb|ACF02935.1| Tetratricopeptide TPR_4 [Rhodopseudomonas palustris TIE-1]
Length = 715
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 277/548 (50%), Gaps = 16/548 (2%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI-KP 63
G A ++ ++ A+ Y+ A +P A N YKD LDKA+ Y ALSI K
Sbjct: 164 GNALHKLGRYTEALESYDKAIEIDPLSDVAFMNRAGTYKDLKQLDKALASYDRALSIGKR 223
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
L + ++ DA A + P A A LG G AI +
Sbjct: 224 PVQAGLARAETLLFMRNVKDAMA-TCTAVLKVEPNSAIALTLLGNCMASLGDAETAIALH 282
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD--WGKRFMRLYSQ-YTSWDNTK 180
+ L++ P+ A +++ +M++ G D +A R W + +Y T N +
Sbjct: 283 SRALELMPNYEAAISSKIFSMDFC-AGSDVGAQQAVRSSWWTQIGAPIYRACATPPTNDR 341
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+R LV+GYVS D+ HS ++ + +HD+ ++VV+YS VV D T F E +
Sbjct: 342 DPDRRLVVGYVSADFRAHSAAFSFRPVIEHHDHSQFEVVLYSGVVVPDDSTRAF-EVIAD 400
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
K WRD + ++ +A ++EDK+DILV+L+GH+ N+L + A +PAPVQVT G+
Sbjct: 401 K---WRDATLMSDQGLADQIKEDKVDILVDLSGHSNGNRLRVFARKPAPVQVTAWGHATG 457
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP +DY + D +A P E + + E + LP + P P+ P NG++T+
Sbjct: 458 TGLPVMDYLLGDPVAIPVEDRHFYAEAVYDLPSIVII-EPVPQQWRSLELPFDRNGYLTY 516
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GS N ++KI+ ++VW+++L A P SRL++K +VR L G+ R+
Sbjct: 517 GSLNRISKISDAAIEVWSQVLAASPTSRLILKDHQIDDPAVRQTLLEKFGARGIADGRIT 576
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LL DH++ +D+ LD FP AG +T E+L+MGVP V+ G VG ++L
Sbjct: 577 LLG-SSSRQDHLETLKQIDLCLDPFPQAGGVSTWEALHMGVPVVSRLGHTVPSRVGCAVL 635
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
GL IA N+ Y+++A + D+ L ++R LRD + + C + +E Y
Sbjct: 636 AAAGLPDFIAPNDTRYIEIASK--PDLERLRSIRRGLRDFILQR--CGPAAYTRAVEEAY 691
Query: 541 RNMWHRYC 548
R MW R+C
Sbjct: 692 RTMWKRWC 699
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
++ I + A +P A+A +++G + ++ A++I P + N G+
Sbjct: 72 ELGIKTLKRALLADPKSAQAQSDMGSMLIAVGRFADSLASCDKAIAIDPTLMLAYANRGL 131
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
+ + + A +KAI P A+ +N+ G G + A+++Y++ ++IDP S
Sbjct: 132 ALSALARYEDAIASFDKAIELMPDRADTWNDRGNALHKLGRYTEALESYDKAIEIDPLSD 191
Query: 135 NAGQNR 140
A NR
Sbjct: 192 VAFMNR 197
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Query: 9 GEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G ML +F ++ + A +P A N G+ + A+ + A+ + P+
Sbjct: 96 GSMLIAVGRFADSLASCDKAIAIDPTLMLAYANRGLALSALARYEDAIASFDKAIELMPD 155
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ + N+ G G+ A E +KAI +P A+ N Y+D + A+ +Y+
Sbjct: 156 RADTWNDRGNALHKLGRYTEALESYDKAIEIDPLSDVAFMNRAGTYKDLKQLDKALASYD 215
Query: 125 QCLKIDPDSRNAGQNR---LLAMNYINEG 150
+ L I AG R LL M + +
Sbjct: 216 RALSIGKRPVQAGLARAETLLFMRNVKDA 244
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
N + ++ + AL P +Q+ +++G + G+ + +KAIA +PT AY N
Sbjct: 70 NAELGIKTLKRALLADPKSAQAQSDMGSMLIAVGRFADSLASCDKAIAIDPTLMLAYANR 129
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
G+ AI ++++ +++ PD + +R A++ +
Sbjct: 130 GLALSALARYEDAIASFDKAIELMPDRADTWNDRGNALHKLGR 172
>gi|422321355|ref|ZP_16402403.1| hypothetical protein HMPREF0005_03694 [Achromobacter xylosoxidans
C54]
gi|317403788|gb|EFV84268.1| hypothetical protein HMPREF0005_03694 [Achromobacter xylosoxidans
C54]
Length = 1135
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 262/513 (51%), Gaps = 10/513 (1%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
L I +A+ + A+ + P +++ L + + A AIA +P
Sbjct: 629 LAAILAQLGRTSEAIAVGRRAVELGPRNAEAHAILADALAAERRHKEAQASNLTAIALDP 688
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFE 157
+A NL Y DAG +SLA A + + I P N L A+NY +E +++F+
Sbjct: 689 KQRKARINLCKAYIDAGEVSLAEQAAREAVAIFPTDAIVRNNLLFALNYSHERTAEEVFQ 748
Query: 158 AHRDWGKR-FMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNY 216
A+++ ++ F L +++ N + +R L IGYVSPD+ HS + F+E +HD Q +
Sbjct: 749 AYQECDRQLFQPLRNKWRPHANPRHADRKLKIGYVSPDFRKHSGNNFVELVFAHHDRQAF 808
Query: 217 KVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTA 276
++ Y+ ++ D T RF+ W G+ + ++A +R+D IDIL++L GHT
Sbjct: 809 ELTAYAELLVEDEVTERFKTYFDH----WTPTAGLTDAELAEQIRDDGIDILIDLAGHTQ 864
Query: 277 NNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFL 336
N+LG A +PAPV +TW+GY TTGL IDY + D P + E++ RL
Sbjct: 865 GNRLGAFARKPAPVSLTWMGYGYTTGLSAIDYIVMDETMAPAGSDTLFSEKVWRLSTAG- 923
Query: 337 CYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPF 396
Y P G V PAL+ FITFG+ + +I + ++ WA IL +P++RLVV +
Sbjct: 924 AYRPIATMGEVSELPALSTDFITFGTLSRAIRINERTIRTWAAILRRLPHARLVVDSGSY 983
Query: 397 CCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
++ ++ E G++ R+ I + +DI LD FP+ TT ES
Sbjct: 984 QDAAMCEALVAEFEARGVDRNRLS----IGFHSPPWDVLRQIDIGLDCFPHNSGTTLMES 1039
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMS 516
+YMGVP V++A +G S+L VGL HLI E+EYV+ A+ LASD+ ALA++R
Sbjct: 1040 IYMGVPYVSLADRPSVGRLGGSILKSVGLAHLICATEEEYVEKAIALASDLPALADIRRG 1099
Query: 517 LRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
LR S + D F E + M+ ++C+
Sbjct: 1100 LRQAAHDSVLMDEAGFTREFEMGLKKMYSQWCE 1132
>gi|367471522|ref|ZP_09471128.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. ORS 285]
gi|365276114|emb|CCD83596.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. ORS 285]
Length = 740
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/548 (29%), Positives = 264/548 (48%), Gaps = 7/548 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ G+ ++ FD A+ A P A G ++ D+A + AL+
Sbjct: 196 LHGKGLVGLKLRHFDEALAALNAALAIRPDAASVLAERGQVHLQAGRFDQAKADFDAALA 255
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+PN +L + Q + A K + NP+ A+ LG Y G I A+
Sbjct: 256 REPNLESALLGRAHLGVHQNDVAPAMAACRKVLEQNPSSEAAWTWLGGCYAKQGDIEAAL 315
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
++ L + PD R+A ++ A++++ + + R+W +R R + +
Sbjct: 316 QHFDHALALKPDYRDAIAAKIFALDFLPDADFARQQAVRREWWERIGRQLPRAALASRNR 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPER LVIGYVS D+ HS ++ + L +HD+ ++V+ YS + D T R R
Sbjct: 376 DPERRLVIGYVSADFRNHSAAFTVLPVLRHHDHAQFEVICYSCSARQDEVTARCRAAADG 435
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W D + + + +AA ++ D +DILV+L+GH++ N+L + A +PAP+QVT G+
Sbjct: 436 ----WVDAWQMSDDDLAARIQADGVDILVDLSGHSSGNRLTLFARKPAPIQVTAWGHGTG 491
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDY D + P E + E++ LP + P P P P L G++TF
Sbjct: 492 TGLPTIDYFFADPVTVPAEMRHLFAEQVYDLP-AVITTDPLP-VMPSTELPMLRTGYVTF 549
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G FN + KI+ L VW R++ +P +R VVK +R ++ G+ + RV
Sbjct: 550 GVFNRIDKISDAALSVWGRLMAQLPEARTVVKNSAIDDAFLRDGLVARFVAHGIAADRVI 609
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
H+ ++ +DISLD FP G +T ESL GVP + G A ++
Sbjct: 610 CFGST-TREQHVAQFAHVDISLDPFPQNGGVSTWESLQAGVPVLAKLGCSPASRAAAAIN 668
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T +GL +A ++D YV +AL+ ++ LA LR L ++ S + + + +E Y
Sbjct: 669 TALGLDDWVAADDDGYVAIALKHVAEPARLAQLRAELPARVAGSAAGNVETYTRKVEEAY 728
Query: 541 RNMWHRYC 548
R W RYC
Sbjct: 729 RLFWRRYC 736
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A A LG+ D L A A+ I P + NLG+V + G+ A
Sbjct: 54 PDHAGALRLLGMAALDSGALSDAAAALARAVEIDPRDVDAHANLGIVLSNLGRHAEARRH 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
E+A+A P +A +N+LG AI AYE+ + + PD +A NR +A+ ++
Sbjct: 114 QERAVALVPNFAAGWNSLGSTLLRLQEAEPAIAAYERAVTLKPDYADAHCNRGMALLLVD 173
Query: 149 E 149
Sbjct: 174 R 174
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 52/105 (49%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
+P +A NLG++ + +A + A+++ PNF+ N+LG + + A
Sbjct: 86 IDPRDVDAHANLGIVLSNLGRHAEARRHQERAVALVPNFAAGWNSLGSTLLRLQEAEPAI 145
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
E+A+ P YA+A+ N G+ + A+ ++++ L ++P
Sbjct: 146 AAYERAVTLKPDYADAHCNRGMALLLVDRSAEALQSFDRALALNP 190
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ + + A E A P+ A N+LG + A+ Y+ A+++K
Sbjct: 96 NLGIVLSNLGRHAEARRHQERAVALVPNFAAGWNSLGSTLLRLQEAEPAIAAYERAVTLK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
P+++ + N G+ + + A + ++A+A NP + +A + G++
Sbjct: 156 PDYADAHCNRGMALLLVDRSAEALQSFDRALALNPRHIQALHGKGLV 202
>gi|171320226|ref|ZP_02909284.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
MEX-5]
gi|171094515|gb|EDT39571.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
MEX-5]
Length = 647
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 183/588 (31%), Positives = 277/588 (47%), Gaps = 40/588 (6%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + M FD A +E A +P A A LG + + ++++ + A+ + P
Sbjct: 64 LGRSLRSMNDFDGAARLFERACEIDPGYAPAWCRLGELRCQQGEYEESLRLCRHAIELDP 123
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ + N LG+ Y +M AA AI NP A+A++NL + A+ Y
Sbjct: 124 ELADAYNFLGLAYHNLDRMAAAELSHRHAIDLNPDDADAHHNLAAALFRLDKLDEAMSEY 183
Query: 124 E--QCLKIDP--------DSRNAGQNRLLAMNYINEG--HD------------------- 152
Q L +DP D A ++ A+ E HD
Sbjct: 184 RIAQELGVDPVKIQLTLGDILWAKRDFTGAVAAFREAVEHDPHRAYARLLFNMSSSPAFA 243
Query: 153 --DKLFEAHR--DWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+ + +A R D+ R RL S + RPL +G+VS D H V F+E+ L
Sbjct: 244 PEEWVVDAQRYGDYLARDARLLSHDREQRARQARGRPLRVGFVSGDLRQHPVGIFLESVL 303
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+ D + Y V D T R + W+ + ++ + A M+ +D ID+L
Sbjct: 304 AHLDRTRIEPHAYVTFVVEDDVTARLKSGFAS----WKKLTCLNRDQAARMIHDDGIDVL 359
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V+L GHT + L + A +PAPVQ +W+G+ TTG IDY I D P + VE+
Sbjct: 360 VDLAGHTNWSGLPVFAHRPAPVQASWLGFFATTGCRAIDYFIGDPHTLPADEAHHFVEQP 419
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP+ +LC+TP V P P TNG +TFG F L KI+ V+ +W+R+L A+P++R
Sbjct: 420 WHLPDSYLCFTPPAYDVAVGPLPMATNGGVTFGCFGKLTKISDDVIALWSRLLHALPDAR 479
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L++K + L + G+ + ++ +L ++ AY+ +DI+L FPY
Sbjct: 480 LMLKAHELGASDLNRATLERFARHGIGAQQL-ILEGGSPRAEYFNAYNRIDIALSPFPYP 538
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G TTT E+L+MGVP + M G ++ SLL G+ IA +ED Y+ A+ A D
Sbjct: 539 GGTTTAEALWMGVPVIGMKGGRFVTHICESLLHAAGMGDWIAADEDAYLAKAIAFARDRD 598
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLK 556
ALA LR +LR+ SP+CD FA LE + MW RY GD +
Sbjct: 599 ALAALRATLRERTLASPLCDAARFARNLEDAFHGMWARYVAGDTDGTR 646
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 30 HCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMI 89
HCA LG + ++ D A ++ A I P ++ + LG + QG+ + + +
Sbjct: 61 HCA-----LGRSLRSMNDFDGAARLFERACEIDPGYAPAWCRLGELRCQQGEYEESLRLC 115
Query: 90 EKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
AI +P A+AYN LG+ Y + ++ A ++ + ++PD +A N A+ +
Sbjct: 116 RHAIELDPELADAYNFLGLAYHNLDRMAAAELSHRHAIDLNPDDADAHHNLAAALFRL-- 173
Query: 150 GHDDKLFEA 158
DKL EA
Sbjct: 174 ---DKLDEA 179
>gi|172059230|ref|YP_001806882.1| hypothetical protein BamMC406_0165 [Burkholderia ambifaria MC40-6]
gi|171991747|gb|ACB62666.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
MC40-6]
Length = 828
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 183/589 (31%), Positives = 277/589 (47%), Gaps = 40/589 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
LG + M FD A +E A +P A A LG + + ++++ + A+ +
Sbjct: 244 TLGRSLRSMNDFDGAARLFERACEIDPGYAPAWCRLGELRCQQGEYEESLRLCRHAIELD 303
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + N LG+ Y +M A+ AI NP A+A++NL + A+
Sbjct: 304 PELADAYNFLGLAYHNLDRMAASELSHRHAIDLNPDDADAHHNLAAALFRLDKLDEAMSE 363
Query: 123 YE--QCLKIDP--------DSRNAGQNRLLAMNYINEG--HD------------------ 152
Y Q L +DP D A ++ A+ E HD
Sbjct: 364 YRIAQELGVDPVKIQLTLGDILWAKRDFAGAVAAFREAVEHDPHRAYARLLFNMSSSPAF 423
Query: 153 ---DKLFEAHR--DWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAP 207
+ + +A R D+ R RL S + RPL +G+VS D H V F+E+
Sbjct: 424 APEEWVVDAQRYGDYLARDARLLSHDREQRARQARGRPLRVGFVSGDLRQHPVGIFLESV 483
Query: 208 LVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
L + D + Y V D T R + W+ + ++ + A M+ +D ID+
Sbjct: 484 LAHLDRTRIEPHAYVTFVVEDDVTARLKSGFAS----WKKLTCLNRDQAARMIHDDGIDV 539
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
LV+L GHT + L + A +PAPVQ +W+G+ TTG IDY I D P + VE+
Sbjct: 540 LVDLAGHTNWSGLPVFAHRPAPVQASWLGFFATTGCRAIDYFIGDPHTLPADEAHHFVEQ 599
Query: 328 LIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
LP+ +LC+TP V P P TNG +TFG F L KI+ V+ +W+R+L A+P++
Sbjct: 600 PWHLPDSYLCFTPPAYDVAVGPLPMATNGGVTFGCFGKLTKISDDVIALWSRLLHALPDA 659
Query: 388 RLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY 447
RL++K + L + G+ S ++ +L ++ AY+ +DI+L FPY
Sbjct: 660 RLMLKAHELGASDLNRATLERFARHGIGSHQL-ILEGGSPRAEYFNAYNRIDIALSPFPY 718
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G TTT E+L+MGVP + M G ++ SLL G+ IA +ED Y+ A+ A D
Sbjct: 719 PGGTTTAEALWMGVPVIGMKGGRFVTHICESLLHAAGMGDWIAADEDAYLAKAIAFARDR 778
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLK 556
ALA LR +LR+ SP+CD FA LE + MW RY GD +
Sbjct: 779 DALAALRATLRERTLASPLCDAARFARNLEDAFHGMWARYVAGDTDGTR 827
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 80/147 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E + D AI Y A P EA NNLG +D + +A++ A+ ++
Sbjct: 76 NLGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMQSCSRAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG V G++DAAA KAI+ +P YAEA++NLG + R + AI
Sbjct: 136 PGYAEAYNNLGNVLQDLGELDAAAASYGKAISFHPAYAEAHSNLGNVLRAQERHADAIVH 195
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE 149
Y + ++++P R A + +A+ ++
Sbjct: 196 YRRAIELNPALRVAHRGLAIALRATDD 222
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
+A+ + +F A Y+ H P +A + LG++ D + + +L+ +P+
Sbjct: 12 LAHHQAGRFAQAKTLYDAILHAQPGQPDAMHFLGLLACQLKQYDAGLALMERSLAERPDA 71
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
S NNLG + G++D A +A+A P Y EA+NNLG RDA + A+ + +
Sbjct: 72 SY-FNNLGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMQSCSR 130
Query: 126 CLKIDP 131
+++ P
Sbjct: 131 AIELRP 136
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P AE LG + ++ D A ++ A I P ++ + LG + QG+ + +
Sbjct: 234 LEPDDAEGHCTLGRSLRSMNDFDGAARLFERACEIDPGYAPAWCRLGELRCQQGEYEESL 293
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
+ AI +P A+AYN LG+ Y + ++ + ++ + ++PD +A N A+
Sbjct: 294 RLCRHAIELDPELADAYNFLGLAYHNLDRMAASELSHRHAIDLNPDDADAHHNLAAALFR 353
Query: 147 INEGHDDKLFEA 158
+ DKL EA
Sbjct: 354 L-----DKLDEA 360
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A+ A P AEA NNLG + +D LD A Y A+S
Sbjct: 110 NLGNALRDARDPAEAMQSCSRAIELRPGYAEAYNNLGNVLQDLGELDAAAASYGKAISFH 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ +NLG V Q + A +AI NP A+ L + R A++
Sbjct: 170 PAYAEAHSNLGNVLRAQERHADAIVHYRRAIELNPALRVAHRGLAIALRATDDFDGALEH 229
Query: 123 YEQCLKID 130
L+ D
Sbjct: 230 ARAGLEPD 237
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + AIV Y A NP A L + + D+ D A+E + L +
Sbjct: 178 NLGNVLRAQERHADAIVHYRRAIELNPALRVAHRGLAIALRATDDFDGALEHARAGL--E 235
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ ++ LG D AA + E+A +P YA A+ LG L G ++
Sbjct: 236 PDDAEGHCTLGRSLRSMNDFDGAARLFERACEIDPGYAPAWCRLGELRCQQGEYEESLRL 295
Query: 123 YEQCLKIDPDSRNA 136
+++DP+ +A
Sbjct: 296 CRHAIELDPELADA 309
>gi|332530455|ref|ZP_08406398.1| hypothetical protein HGR_11012 [Hylemonella gracilis ATCC 19624]
gi|332040115|gb|EGI76498.1| hypothetical protein HGR_11012 [Hylemonella gracilis ATCC 19624]
Length = 755
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 263/518 (50%), Gaps = 39/518 (7%)
Query: 49 DKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
DKA+ +A S P +L+ G+ K AE +E + A N +
Sbjct: 110 DKALSWIHLARSCYP---MTLHEEGLA--AANKAWELAESVEDKLGA-------LNQRAI 157
Query: 109 LYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR 168
R+ G + A++ + + ++P N LL M + + EA R++G F
Sbjct: 158 HRRELGQVHEAVEDCKAAIALNPADIAHHTNLLLFMLADPDASVHDMAEAARNFGTTFET 217
Query: 169 LYSQYTSWDN-----TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA 223
+W + P R L +G++SPD+ H+V YF E L D + ++V +
Sbjct: 218 ALK--PAWPDHAARREGGPWRRLKVGFISPDFHNHAVMYFAEGLLAQLDRRQFEVWAFDL 275
Query: 224 VVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMM 283
D R R V + ++ + + AA+++E IDIL++L+GHT N L M
Sbjct: 276 GTLEDNAAERVRCHVDRH----VKLHLKNSVEQAAIIQEAGIDILIDLSGHTGGNALPTM 331
Query: 284 ACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPE 343
A +PAPVQ IGYP TTGL ID+ +D + DPP + E+L RLP ++CY P
Sbjct: 332 ARKPAPVQAFTIGYPGTTGLTAIDWWFSDGITDPPGADALYTEQLYRLPTRWICYRPHSR 391
Query: 344 --------AGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 395
A V PTPALTNGF+TFGS NNL K+T VL +W RIL VPNSRL+++ K
Sbjct: 392 NPLWRYQPAYQVRPTPALTNGFVTFGSCNNLGKLTDDVLALWGRILATVPNSRLLIEGKN 451
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL---MDISLDTFPYAGTTT 452
+ + E+LG++ R+DL+PL D+ + Y + +D++LD FP G TT
Sbjct: 452 LGQPEFSASYRARCERLGIDVSRLDLVPL-----DYAKQYLVYHRIDVALDPFPLVGGTT 506
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
+ + ++MGVP +TM G +GV +L +G IA+N DEYV +A +LASDV AL
Sbjct: 507 SNDVIWMGVPLITMNGDALKSRMGVGMLAHMGRHDWIARNPDEYVAIASRLASDVDALNR 566
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
+R+ LRD + S V + + + R MW + G
Sbjct: 567 IRLGLRDEVEASTVMREDVYTQEVGNALRFMWMLWLAG 604
>gi|367471523|ref|ZP_09471129.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 285]
gi|365276115|emb|CCD83597.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 285]
Length = 740
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 277/548 (50%), Gaps = 9/548 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ G+ + FD A+ + A P A G ++ D A ++ AL+
Sbjct: 197 FGKGLVSINLRHFDQALAAFNAALAIKPGAAAVIAQRGRLFIQMARFDAAEADFEAALAT 256
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P +L V + ++ A ++ + NP+ A LG + G + AI
Sbjct: 257 DPRLEAALLGKAHVGVLTDRIAPAMLACKRVLETNPSSEVALLWLGACFARQGDTAAAIQ 316
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA-HRDWGKRFMRLYSQYTSWDNTK 180
+E+ L+I PD +A ++ A+++ G D +A R+W R + +
Sbjct: 317 HFERALEIKPDFEDAILKKIFALDFY-PGADVAAHQAVRREWWDRIGVHIPRCELTGIDR 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPER + +GYVS D+ +HS + L +HD+Q +KV+ YS DA T E+
Sbjct: 376 DPERRITVGYVSSDFRSHSAALTFLPVLRHHDHQAFKVICYSGSPLVDAVT----EQCKA 431
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W D + + ++++ A +R D++DILV+L+GH+A N+L + A +PAP+QVT G
Sbjct: 432 ASDGWVDAWQLSDEELVARIRSDQVDILVDLSGHSAGNRLTLFARKPAPIQVTAWGNATG 491
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDY D + P + EE+ LP + P P+A P P P L N ++TF
Sbjct: 492 TGLPTIDYFFADPVTVPQAVRPLFAEEVYDLP-ALITTDPLPDAQPT-PLPMLHNRYVTF 549
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G FN + KI+ +VL VWA +L A+P++R+VVK +R ++ G+ R+
Sbjct: 550 GVFNRVDKISDQVLGVWAALLRALPDARIVVKNGALDDSFLRDGLIARFAAHGIAEHRLT 609
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L + H+H+ A++ +DISLD FP G +T ESL GVP V G+ A G +++
Sbjct: 610 CLGSSM-RHEHIAAFAQIDISLDPFPQNGGVSTWESLQAGVPVVAKLGNSSASRAGGAIV 668
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VGL +A+++D Y+ +AL+ A++ ALA LR L ++ SP + + +E Y
Sbjct: 669 KAVGLDDWVAEDDDGYIAIALKHAANPAALAQLRAELSARVASSPAGNVVTYTRKVEEGY 728
Query: 541 RNMWHRYC 548
W RYC
Sbjct: 729 CTFWRRYC 736
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P EA + LG D D A + A++++P +++L NLG+V + + A
Sbjct: 54 PDHFEALHLLGASALDSGRFDLAEQALTRAIAVEPRNAEALANLGLVLASLKRYEEARAA 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
E+A+A PT+A A+ LG + A+ A+++ + I PD +A NR +A+
Sbjct: 114 QERAVALKPTFATAWTGLGNTLMNMQLFEQAVAAHDRAIAIKPDYADAYCNRGMAL 169
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG + + +FD+A A P AEA NLG++ ++A + A++
Sbjct: 60 LHLLGASALDSGRFDLAEQALTRAIAVEPRNAEALANLGLVLASLKRYEEARAAQERAVA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KP F+ + LG + A ++AIA P YA+AY N G+
Sbjct: 120 LKPTFATAWTGLGNTLMNMQLFEQAVAAHDRAIAIKPDYADAYCNRGM 167
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 32 AEACNNLGVIYKDRDNLD----KAVECYQMA------------LSIKPNFSQSLNNLGVV 75
+ A N + K+R D KAVE Y+ L++ P+ ++L+ LG
Sbjct: 7 SRAFQNARLQKKNRKQADGMLPKAVEAYRAGRHADAQAICGQVLTLVPDHFEALHLLGAS 66
Query: 76 YTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+ D A + + +AIA P AEA NLG++ A A E+ + + P
Sbjct: 67 ALDSGRFDLAEQALTRAIAVEPRNAEALANLGLVLASLKRYEEARAAQERAVALKP 122
>gi|115350209|ref|YP_772048.1| hypothetical protein Bamb_0153 [Burkholderia ambifaria AMMD]
gi|115280197|gb|ABI85714.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
AMMD]
Length = 754
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 178/577 (30%), Positives = 282/577 (48%), Gaps = 44/577 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAV--------- 52
+N G + D AI Y A PH A + LGV+ +RD+ + A+
Sbjct: 178 FNQGNVLRAQRRPDEAIACYREAIALQPHLHAAHHALGVLLFERDDREAAIASLTRAAES 237
Query: 53 ---EC-YQMALSIK-------------------PNFSQSLNNLGVVYTVQGKMDAAAEMI 89
+C + +A +++ P+ + ++L QGK A +
Sbjct: 238 GEADCLFHLAAALERAGDLDGTVASLRRALAAAPDRADLHHHLAQTLVRQGKRREALDSC 297
Query: 90 EKAIA-ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
A++ NPT A+ + +G + + + +Y++ L+IDP RNA R+ +
Sbjct: 298 RIALSLPNPT-AQMHAVMGDILCAMWHLDAGLASYDRALEIDPAFRNAHSGRMFHAAGTD 356
Query: 149 EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE--RPLVIGYVSPDYFTHSVSYFIEA 206
+L E R++G R + +Q + + P R L +G+VS D +H V+ F+ +
Sbjct: 357 RLSPMQLLERAREFGAR---MAAQASPRTHVPRPAAGRVLRVGFVSGDLKSHPVAVFLLS 413
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
+ D V Y+ D T + +WRDI +D++ A ++ D ID
Sbjct: 414 VVAALDPSRIAAVAYATQSVEDDTTAALKRHF----ALWRDITALDDRAAADLIVNDHID 469
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
+LV+L+GHTA+N+L + A +PAPVQ TW+GY TTG+ IDY I D P + E
Sbjct: 470 VLVDLSGHTASNRLPLFAWKPAPVQATWLGYFATTGIAAIDYVIGDRHVLPDDEAHHFAE 529
Query: 327 ELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
RLP+ +LC+TP + V P PA G +TFG NN KI V+ +W+R+L AVP
Sbjct: 530 RPWRLPDSYLCFTPPAQPLDVGPLPAEREGVVTFGCLNNANKIGDAVVALWSRVLHAVPG 589
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
SRL++K ++R + G+ + R+ LL H+ Y+ +DI LD FP
Sbjct: 590 SRLLLKSAQLDEAALRTSLAARFAAHGIPAERL-LLRGGSKRLAHIATYNDIDIVLDPFP 648
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
Y G TT+ E L+MG P +T G ++G S+L +G+ IA N+D+YV A A D
Sbjct: 649 YPGGTTSMEGLWMGAPFITRRGDRFLSHIGESILHTLGMPEWIADNDDDYVAKAAAFAQD 708
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
+ +A +R LR+ + +SP+CD FA LE+ + M
Sbjct: 709 LPHVAAVRAGLRERLLRSPLCDAPRFARHLEAAFAQM 745
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 8 YGEMLK----FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G ML+ AI Y A P AEA +NLG +D + D A+ AL+++P
Sbjct: 78 FGNMLRAHGRLGDAIGAYRRAIALAPDYAEAHSNLGNALRDAGDADAAMLSCAQALALRP 137
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++ + NNLG +G++DAAA EKAIA +P YA+A N G + R AI Y
Sbjct: 138 DYAPAFNNLGNALQDKGELDAAARAYEKAIALDPGYAQARFNQGNVLRAQRRPDEAIACY 197
Query: 124 EQCLKIDP 131
+ + + P
Sbjct: 198 REAIALQP 205
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
NN G + + L A+ Y+ A+++ P+++++ +NLG G DAA +A+A
Sbjct: 76 NNFGNMLRAHGRLGDAIGAYRRAIALAPDYAEAHSNLGNALRDAGDADAAMLSCAQALAL 135
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
P YA A+NNLG +D G + A AYE+ + +DP
Sbjct: 136 RPDYAPAFNNLGNALQDKGELDAAARAYEKAIALDP 171
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + D A++ A P A A NNLG +D+ LD A Y+ A+++
Sbjct: 111 NLGNALRDAGDADAAMLSCAQALALRPDYAPAFNNLGNALQDKGELDAAARAYEKAIALD 170
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
P ++Q+ N G V Q + D A +AIA P A++ LGVL
Sbjct: 171 PGYAQARFNQGNVLRAQRRPDEAIACYREAIALQPHLHAAHHALGVL 217
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N + + +FD A + YE P +A + LG++ + + A++++
Sbjct: 10 NAAFVHHQAGRFDDARMLYEAIRRDEPDQPDATHFLGLLACQLGQFPAGLALMERAIALR 69
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ LNN G + G++ A +AIA P YAEA++NLG RDAG A+ +
Sbjct: 70 AD-PVYLNNFGNMLRAHGRLGDAIGAYRRAIALAPDYAEAHSNLGNALRDAGDADAAMLS 128
Query: 123 YEQCLKIDPD 132
Q L + PD
Sbjct: 129 CAQALALRPD 138
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + D A YE A +P A+A N G + + + D+A+ CY+ A++++
Sbjct: 145 NLGNALQDKGELDAAARAYEKAIALDPGYAQARFNQGNVLRAQRRPDEAIACYREAIALQ 204
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + + LGV+ + +AA + + AA A+ +L AG + + +
Sbjct: 205 PHLHAAHHALGVLLFERDDREAAIASLTR--AAESGEADCLFHLAAALERAGDLDGTVAS 262
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+ L PD A + LA + +G
Sbjct: 263 LRRALAAAPD--RADLHHHLAQTLVRQG 288
>gi|387900923|ref|YP_006331262.1| hypothetical protein MYA_0162 [Burkholderia sp. KJ006]
gi|387575815|gb|AFJ84531.1| TPR domain protein, Putative component of TonB system [Burkholderia
sp. KJ006]
Length = 828
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 273/581 (46%), Gaps = 46/581 (7%)
Query: 10 EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL 69
M +FD A+ E A +P A A LG + + +AV+ + A+ + P + +
Sbjct: 251 RMSEFDKAVALLERAIEIDPARARAWAWLGDLRNQQGEYGQAVQACRHAIELDPELADAY 310
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE--QCL 127
N LG Y + AA AI NP A+A++NL + + A++ E + L
Sbjct: 311 NFLGFAYHNLNALAAAELSYRHAIDLNPDDADAHHNLAAVLLRLEKLDEAMEHIEIAREL 370
Query: 128 KIDP--------DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----QYTS 175
IDP D R A + A++ ++ HR + + + S +
Sbjct: 371 GIDPLKTQMTLGDIRWARGDFTGALDAYRSA---IRYDLHRAYSRMLFNMSSSPAFEPQE 427
Query: 176 W-----------DNTKDP-------------ERPLVIGYVSPDYFTHSVSYFIEAPLVYH 211
W + DP RPL +G+VS D H V F+E+ L
Sbjct: 428 WVVEAVRYGEHLERDADPFEHDRAKRVAQAHARPLRVGFVSGDLRQHPVGIFLESVLGRI 487
Query: 212 DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVEL 271
D + Y V D T R + W+ + G+ ++ A ++R+D +DIL+++
Sbjct: 488 DRSRIEPHAYVTFVGEDGVTARLKPNFAS----WKKVVGLGREEAAQLIRDDGMDILIDM 543
Query: 272 TGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRL 331
GHT + L + A +PAPVQ +W+G+ TTG IDY I D+ P + + E RL
Sbjct: 544 AGHTDWSGLPIFAHKPAPVQASWLGFFATTGCRAIDYFIGDAHTLPADEEHHFTERPWRL 603
Query: 332 PECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV 391
P+ +LC+TP V P P TNG +TFG F L KI+ V+ +W+RIL A+P +RL++
Sbjct: 604 PDSYLCFTPPAYDVAVGPLPMATNGGVTFGCFGKLVKISDGVVALWSRILHALPGARLLL 663
Query: 392 KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTT 451
K D V L + G+ + R+ +L ++ AY+ +DI+L FPY G T
Sbjct: 664 KAYELGADDVNRATLERFARHGIGADRL-ILEGGSPRAEYFAAYNRIDIALSPFPYPGGT 722
Query: 452 TTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALA 511
TT E+L+MGVP + M G ++ SLL G+ IA +E Y+ A+ ASD LA
Sbjct: 723 TTAEALWMGVPVLGMKGGRFVTHICESLLHAAGMGEWIADDEAAYLAKAVAFASDRDRLA 782
Query: 512 NLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDV 552
LR +LR+ + SP+CD FA LE MW Y G+
Sbjct: 783 TLRATLRERVLASPLCDASRFAHNLEDALHGMWASYAAGET 823
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E + D AI Y A P AEA NNLG +D + A+ A+ ++
Sbjct: 76 NLGNMLRESGRLDDAIAHYRRAVALRPDYAEAHNNLGNALRDARDPTAAMASCARAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++Q+ NNLG G+ +AAA KA+A P YA+AY+NLG R A DA
Sbjct: 136 PDYAQAYNNLGNALQDLGEHEAAAASYAKAVAHQPQYADAYSNLGNALRAQEKFDEAADA 195
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + + + P R A Q
Sbjct: 196 YRRAIALQPGLRVAHQG 212
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+ ++ ++D + + + P A NNLG + ++ LD A+ Y+ A++
Sbjct: 41 LHFLGLLACQLKQYDAGLALMKQSLVERPD-ASYFNNLGNMLRESGRLDDAIAHYRRAVA 99
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
++P+++++ NNLG AA +AI P YA+AYNNLG +D G
Sbjct: 100 LRPDYAEAHNNLGNALRDARDPTAAMASCARAIELRPDYAQAYNNLGNALQDLG 153
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
+A+ + + A Y+ P +A + LG++ D + + +L +P+
Sbjct: 12 LAHHQSGRLAEAKTLYDAILTAQPGQPDALHFLGLLACQLKQYDAGLALMKQSLVERPDA 71
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
S NNLG + G++D A +A+A P YAEA+NNLG RDA + A+ + +
Sbjct: 72 SY-FNNLGNMLRESGRLDDAIAHYRRAVALRPDYAEAHNNLGNALRDARDPTAAMASCAR 130
Query: 126 CLKIDPDSRNAGQNRLLAMNYINE 149
+++ PD A N A+ + E
Sbjct: 131 AIELRPDYAQAYNNLGNALQDLGE 154
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
+P A+A L + + DKAV + A+ I P +++ LG + QG+ A
Sbjct: 234 LDPGDADAHCVLARLLQRMSEFDKAVALLERAIEIDPARARAWAWLGDLRNQQGEYGQAV 293
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ AI +P A+AYN LG Y + +++ A +Y + ++PD +A N
Sbjct: 294 QACRHAIELDPELADAYNFLGFAYHNLNALAAAELSYRHAIDLNPDDADAHHN 346
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A+ A P A+A NNLG +D + A Y A++ +
Sbjct: 110 NLGNALRDARDPTAAMASCARAIELRPDYAQAYNNLGNALQDLGEHEAAAASYAKAVAHQ 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++ + +NLG Q K D AA+ +AIA P A+ L R AG + A+D
Sbjct: 170 PQYADAYSNLGNALRAQEKFDEAADAYRRAIALQPGLRVAHQGLSETLRAAGDLRGAVDH 229
Query: 123 YEQCLKIDPDSRNA 136
+ L DP +A
Sbjct: 230 AREGL--DPGDADA 241
>gi|172059231|ref|YP_001806883.1| hypothetical protein BamMC406_0166 [Burkholderia ambifaria MC40-6]
gi|171991748|gb|ACB62667.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
MC40-6]
Length = 754
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 280/578 (48%), Gaps = 46/578 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N G + D AI Y A P A + LG++ +RD+L+ AV A
Sbjct: 178 FNQGNVLRAQRRPDEAIASYREAIALQPDLHAAHHALGMLLFERDDLEAAVASLTRA--A 235
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG-VLYR--------D 112
+ + L +L G +D + +A+ A P A+ +++L L R D
Sbjct: 236 ESGEADCLFHLAAALERAGDLDGTVASLRRALVAAPDRADLHHHLAQTLVRHGKRREALD 295
Query: 113 AGSISLAI---------------------DA----YEQCLKIDPDSRNAGQNRLLAMNYI 147
+ I+L++ DA Y++ L+IDP RNA R+
Sbjct: 296 SCRIALSLPNPTAQMHAVMGDILCAMWHLDAGLASYDRALEIDPAFRNAHSGRMFHAAGT 355
Query: 148 NEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE--RPLVIGYVSPDYFTHSVSYFIE 205
+ +L E R++G + + +Q + + P R L +G+VS D +H V+ F+
Sbjct: 356 DRLSPAQLLERAREFGTQ---MAAQASPRTHAPRPAAGRVLRVGFVSGDLKSHPVAVFLL 412
Query: 206 APLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKI 265
+ + D + V Y+ D T + +WRDI +D+ A ++ D+I
Sbjct: 413 SVVAALDASRVEAVAYATQSVEDDTTAALKRHF----ALWRDITALDDHAAADLIANDRI 468
Query: 266 DILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHV 325
D+LV+L+GHTA+N+L + A +PAPVQ TW+GY TTG+ IDY I D P + V
Sbjct: 469 DVLVDLSGHTASNRLPVFAWKPAPVQATWLGYFATTGIAAIDYVIGDRHVLPDDEAHHFV 528
Query: 326 EELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
E RLP+ +LC+TP + V P PA G +TFG NN KI V+ +W+R+L AVP
Sbjct: 529 ERPWRLPDSYLCFTPPAQPLDVGPLPAEREGVVTFGCLNNANKIGDAVVALWSRVLHAVP 588
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
SRL++K ++R + G+ R+ LL H+ Y+ +DI LD F
Sbjct: 589 GSRLLLKSAQLDEAALRTSIAARFAAHGIPVERL-LLRGGSKRLAHIATYNDIDIVLDPF 647
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
PY G TT+ E L+MG P +T G ++G S+L +G+ IA N+D+YV A A
Sbjct: 648 PYPGGTTSMEGLWMGAPFITRRGDRFLSHIGESILHTLGMPEWIADNDDDYVAKAAAFAQ 707
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
+ +A +R LR+ + +SP+CD FA LE+ + M
Sbjct: 708 RLPHVAAVRAGLRERLLRSPLCDAPRFARHLEAGFAQM 745
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 8 YGEMLK----FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G ML+ D AI Y A P AEA +NLG +D + D A+ AL+++P
Sbjct: 78 FGNMLRAHGRLDDAIGAYRRAIALAPDYAEAHSNLGNALRDAGDADAAMLSCAQALALRP 137
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++ + NNLG +G++DAAA EKAIA +P YA+A N G + R AI +Y
Sbjct: 138 DYAPAFNNLGNALQDKGELDAAARAYEKAIALDPGYAQARFNQGNVLRAQRRPDEAIASY 197
Query: 124 EQCLKIDPD 132
+ + + PD
Sbjct: 198 REAIALQPD 206
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
NN G + + LD A+ Y+ A+++ P+++++ +NLG G DAA +A+A
Sbjct: 76 NNFGNMLRAHGRLDDAIGAYRRAIALAPDYAEAHSNLGNALRDAGDADAAMLSCAQALAL 135
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
P YA A+NNLG +D G + A AYE+ + +DP
Sbjct: 136 RPDYAPAFNNLGNALQDKGELDAAARAYEKAIALDP 171
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N + + +FD A V YE P +A + LG++ + + A++++
Sbjct: 10 NAAFVHHQAGRFDDARVLYEAIRRDEPDQPDATHFLGLLACQLGQFPAGLALMERAIALR 69
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ LNN G + G++D A +AIA P YAEA++NLG RDAG A+ +
Sbjct: 70 AD-PVYLNNFGNMLRAHGRLDDAIGAYRRAIALAPDYAEAHSNLGNALRDAGDADAAMLS 128
Query: 123 YEQCLKIDPD 132
Q L + PD
Sbjct: 129 CAQALALRPD 138
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + D A++ A P A A NNLG +D+ LD A Y+ A+++
Sbjct: 111 NLGNALRDAGDADAAMLSCAQALALRPDYAPAFNNLGNALQDKGELDAAARAYEKAIALD 170
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
P ++Q+ N G V Q + D A +AIA P A++ LG+L
Sbjct: 171 PGYAQARFNQGNVLRAQRRPDEAIASYREAIALQPDLHAAHHALGML 217
>gi|395010255|ref|ZP_10393652.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Acidovorax sp. CF316]
gi|394311671|gb|EJE48985.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Acidovorax sp. CF316]
Length = 726
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 190/590 (32%), Positives = 288/590 (48%), Gaps = 25/590 (4%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG A K + +I Y P AE N G I + +A+ + ++P
Sbjct: 38 LGYALDCQGKIEESIEVYRRGALLWPQDAELLINYGNILLNHVRNAQALPILEKVCELRP 97
Query: 64 NFS---QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ L+ + T K AAE + P + A + R+ G +S A+
Sbjct: 98 EKAICWLKLSQCCYLITQHEKGLRAAEKAAELATDIPGRSAALTQKAIHRRELGQVSEAV 157
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSW-DN 178
+ + P + NRLL M L +A D+ F L Q+ ++ D+
Sbjct: 158 QDCLDAIALTPTEPSNHTNRLLFMLADPSADAASLSQAALDYAAVFEPPLKPQWPNFADH 217
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
DP R L IG++SPD+ HSV YF+E L D + ++V + + D T R + V
Sbjct: 218 QGDPWRKLRIGFLSPDFRVHSVMYFVEGLLAQLDRRQFEVFAFYLFPRDDQVTARVQRHV 277
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ + + ++ A +R IDIL++L GHT N L +A + APVQV+W+G+P
Sbjct: 278 DH----FVRLANLGTEQQAEAIRAQGIDILIDLAGHTGYNGLLTLARKAAPVQVSWLGFP 333
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP---------VCP 349
TTGL +DY+ TD + DPP+ + + E+L RLP F CY P P V P
Sbjct: 334 ATTGLQAVDYKFTDEVTDPPDAQANYTEQLYRLPTLFACYRPMSR-NPLWRYQPRYVVRP 392
Query: 350 TPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
TPAL NGFITFGS NNL K+T +VL +W +IL AVP SRL+++ K + +
Sbjct: 393 TPALDNGFITFGSCNNLGKLTDEVLALWGQILEAVPGSRLLIEGKNLDQPDFANAYRQRC 452
Query: 410 EQLGLESLRVDLLPLILLNHDHMQ-AYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
LGL+ D L L+ LN D+ Y +DI+LD FP G TTT + L+MG+P V+M G
Sbjct: 453 RGLGLDP---DRLELVALNGDNQYLTYHRIDIALDPFPLTGGTTTFDVLWMGLPIVSMVG 509
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
S +GV LL+ +G +A+ ++YV++A LA+D+ AL LR+ LR + S +
Sbjct: 510 SSFKSRMGVGLLSYLGRTEWLAETSEDYVRIASGLAADIPALNTLRLGLRSEVEGSALMR 569
Query: 529 GQNFALGLESTYRNMWHRY-CKGDVPSLKRMEMLQQQV-VSEEPSKFSEP 576
F R MW ++ + P + +M Q + P ++++P
Sbjct: 570 EDIFNHHFGEGLRAMWLQWLARAQHPGDEEAQMQAIQAWLPGLPEEWTQP 619
>gi|107024411|ref|YP_622738.1| hypothetical protein Bcen_2869 [Burkholderia cenocepacia AU 1054]
gi|116688262|ref|YP_833885.1| TPR repeat-containing protein [Burkholderia cenocepacia HI2424]
gi|105894600|gb|ABF77765.1| Tetratricopeptide TPR_2 [Burkholderia cenocepacia AU 1054]
gi|116646351|gb|ABK06992.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia
HI2424]
Length = 780
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 261/508 (51%), Gaps = 24/508 (4%)
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
+C ++ L ++P+ ++ G+V + D A +A+ P A LG + +
Sbjct: 266 QCTRL-LQLQPDHPEAFRIRGLVLFALRRTDEAIAACRRAVELAPNAAAPCGTLGFVLLE 324
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ 172
G+ AI ++ ++I+P + L + + ++ L HR +G+R+ +
Sbjct: 325 QGATQEAIRWLKRSIEINPTDSVTHSSMLFCITHSSDFDPQALIAEHRKFGERYGNHKRK 384
Query: 173 YTS-WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVV--YSAVVKADA 229
+ + N++DP R L +G+VS D F+H+V+ + P++ H + + + Y + D
Sbjct: 385 RAAVFSNSRDPARKLQVGFVSGDLFSHAVASY-AVPVIEHLAADPGIAMHFYHNHFEEDH 443
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
+ RF+ WR + G+ + +R D+IDI+++L+GHT N+L +A + AP
Sbjct: 444 VSERFKAHATT----WRTVAGMSDTAFLERLRNDRIDIVIDLSGHTGRNRLVALAQRAAP 499
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
VQ +WIGYP TTGL +DY I D P E + VE+++RLP + P PV
Sbjct: 500 VQASWIGYPATTGLAAMDYFIADRFVAPHGEFDDQFVEQIVRLP-AISSFMPPANCPPVN 558
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
PAL NG+ T+GSFN L K++P V+ VWAR+L A P +R+ + + + +
Sbjct: 559 VLPALRNGYTTYGSFNRLNKLSPHVIGVWARVLHADPTARMALGA--IGNEGDQRVLIDW 616
Query: 409 LEQLGLESLRVDL-----LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC 463
G+++ R+ +P+ L H + D+ LDTFPY G+TTT +L+MGVP
Sbjct: 617 FAAAGIDASRLSFHRRSNIPVYLQQHHGV------DLCLDTFPYTGSTTTLNALWMGVPT 670
Query: 464 VTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSK 523
+T+AG A + L VGL IAKNEDE+V AL L D +L LR LR ++
Sbjct: 671 LTIAGVTLAGRGSANWLMHVGLDTYIAKNEDEFVAKALALGKDTASLQALRSGLRARCAE 730
Query: 524 SPVCDGQNFALGLESTYRNMWHRYCKGD 551
S + A GL S R MW R+C G+
Sbjct: 731 SAAFRPEIVAAGLSSALRTMWARWCAGE 758
>gi|170731575|ref|YP_001763522.1| hypothetical protein Bcenmc03_0220 [Burkholderia cenocepacia MC0-3]
gi|169814817|gb|ACA89400.1| TPR repeat-containing protein [Burkholderia cenocepacia MC0-3]
Length = 779
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 259/515 (50%), Gaps = 23/515 (4%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
+ L +A E ++P+ +++ G+V + D A +A+ P A
Sbjct: 257 NRLSEADEQCTRLYQLQPDHQEAMRIRGLVLFALRRTDEALAACRRAVELAPGAAAPCGT 316
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165
LG + + G+ AI ++ ++I+P + L + + +E L HR +G R
Sbjct: 317 LGFVLLEMGATQEAIGWLKRAIEINPTDSVTHSSMLFCIAHSSEFDPQALVAEHRKFGAR 376
Query: 166 FMRLYSQYTS-WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVV--YS 222
+ + + + N +DP R L +G+VS D F H+V+ + P++ H + + + Y
Sbjct: 377 YDNQKRKRAAVFSNPRDPARKLQVGFVSGDLFGHAVASY-AVPVIEHLATDPGIAMHFYH 435
Query: 223 AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGM 282
+ D+ + RF+ WR++ G+ + VR D IDI+++L+GHT N+L
Sbjct: 436 NHFEEDSTSERFKAHATT----WRNVAGMSDTAFLERVRNDGIDIVIDLSGHTGRNRLVA 491
Query: 283 MACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET-KQKHVEELIRLPECFLCYTPS 341
+A + APVQ +WIGYP TTGL +DY +TD P + VE+L+RLP + P+
Sbjct: 492 LAQRAAPVQASWIGYPATTGLAAMDYYLTDRFVAPHGAFDDQFVEQLVRLP-AIAPFMPA 550
Query: 342 PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
P PV PAL NG+ T+ SFN L K++P V++VWAR+L A P +R+ + +
Sbjct: 551 PNCPPVNVLPALHNGYTTYASFNRLNKLSPHVIEVWARVLHADPTARMALGA--IGSEGD 608
Query: 402 RHRFLSTLEQLGLESLRVDL-----LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
+ G+++ R+ +P+ +MQ + +D+ LD FPY G+TTT +
Sbjct: 609 KQTLTEWFAAAGIDASRLSFHRRSNIPV------YMQQHHGVDLCLDAFPYTGSTTTLNA 662
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMS 516
L+MGVP VT+ G+ A L VGL IAK+ED++V AL L D AL LR
Sbjct: 663 LWMGVPTVTIPGATMAGRGSAGWLQHVGLDAYIAKDEDDFVARALALGRDTAALQALRAG 722
Query: 517 LRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
LR +S A GL S R MW R+C G+
Sbjct: 723 LRARCGESAAFRPAVVAAGLSSALRTMWTRWCAGE 757
>gi|168701390|ref|ZP_02733667.1| TPR domain protein [Gemmata obscuriglobus UQM 2246]
Length = 675
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 278/541 (51%), Gaps = 12/541 (2%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG A + AI + A P +LG+ ++AVE + A+ ++
Sbjct: 146 LGDALARCGRRAEAIGAFREAVARFPDQPRGYCHLGLHLAATGEHEQAVEVLEKAVELRA 205
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
++ ++ N LGV Y G+ D A A+ +A+A+ NLG + G + A+ A
Sbjct: 206 DYPEAQNALGVAYEAVGRADEAQRAYRAAVELRDGFADAWANLGTSLGEQGRVGEAVAAL 265
Query: 124 EQCLKIDPDSRNAGQNRLLA-MNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
+ L + P+ Q+ LL + Y ++L + H W ++ + T P
Sbjct: 266 RKALDLAPNP--IAQSALLTNLLYPGTLTPEQLRDEHVAWAQKHADPLTPAEKPRRTNRP 323
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
R + +GYV ++ + + F+EA L +HD + + V VY+ + E++ +
Sbjct: 324 GR-VRVGYVIGEFKSRAAVSFLEALLTHHDRRQFHVTVYAN----SGRQGEVYERLHRLA 378
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
W I + +++ A ++R D+IDIL +L GH N+L + A +PAPVQ++ GYP TTG
Sbjct: 379 DTWHPIPHLTDERAAELIRTDEIDILADLNGHGQGNRLLLFARKPAPVQLSLFGYPATTG 438
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+ +DYR+TD++ADPP +VE+L+RLP+ Y P +A PA F TFG
Sbjct: 439 MRAMDYRVTDAVADPPGADALYVEKLLRLPDLGGVYVPPADAPVPSAAPAARRAF-TFGC 497
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
N+ AK++ L WA +L AVP SRLV+ S + Q G+ + R++L+
Sbjct: 498 LNHPAKLSDACLDAWAAVLKAVPKSRLVLLAGQSVASSA--EISARFTQRGIVTDRLELV 555
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
L D+ +AY +D+ LD FPY G TTC++L+MGVP +T+AG +SLLT
Sbjct: 556 -YRLSGSDYFEAYQPLDLMLDPFPYGGAVTTCDALWMGVPVLTVAGRDARGRQSMSLLTA 614
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+GL IA + D+ V LA A LA+LR SLRD+MS+SPV + + LE+ Y+
Sbjct: 615 LGLPEFIADDTDQLVTLAATWADQRAGLADLRSSLRDMMSQSPVTNVPGYVNYLEAAYKG 674
Query: 543 M 543
+
Sbjct: 675 L 675
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
+LD+A Y+ L+ PN +L NL + +G D A + +++ A+P + NL
Sbjct: 19 SLDEAEHGYRQLLTATPNHPPALTNLAAIVAQRGDADEAERLYLESLGADPDQLNTHFNL 78
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDS 133
LYR G + AI YE L++ PD+
Sbjct: 79 ANLYRRTGRSADAIPHYEDALRLSPDA 105
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 90/252 (35%), Gaps = 25/252 (9%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ VA D A Y P+ A NL I R + D+A Y +L
Sbjct: 7 LFQRAVAAHRSGSLDEAEHGYRQLLTATPNHPPALTNLAAIVAQRGDADEAERLYLESLG 66
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P+ + NL +Y G+ A E A+ +P NLG+ D G+ ++
Sbjct: 67 ADPDQLNTHFNLANLYRRTGRSADAIPHYEDALRLSPDAPAVLVNLGLAAGDVGNWPRSV 126
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+ + + + ++PD LL G + A R+ RF
Sbjct: 127 ECFARAVTVNPDVPEG--LTLLGDALARCGRRAEAIGAFREAVARF-------------- 170
Query: 181 DPERP-----LVIGYVSPDYFTHSVSYFIEAPLVYHDY---QNYKVVVYSAVVKADAKTI 232
P++P L + + +V +A + DY QN V Y AV +AD
Sbjct: 171 -PDQPRGYCHLGLHLAATGEHEQAVEVLEKAVELRADYPEAQNALGVAYEAVGRADEAQR 229
Query: 233 RFREKVMKKGGI 244
+R V + G
Sbjct: 230 AYRAAVELRDGF 241
>gi|92114109|ref|YP_574037.1| sulfotransferase [Chromohalobacter salexigens DSM 3043]
gi|91797199|gb|ABE59338.1| sulfotransferase [Chromohalobacter salexigens DSM 3043]
Length = 1415
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 165/554 (29%), Positives = 275/554 (49%), Gaps = 8/554 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + + A+ + A P+ A L +Y D K++E + A P
Sbjct: 69 LGYVAHKQHRLQDALQHLQDALELAPNSAFGLATLSYLYLDMGKPYKSIEYAKKAWQFSP 128
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ L++L + + + A ++ ++ I P+ +N+ G +YR+ G ++ A Y
Sbjct: 129 KSLRVLDSLANSLSALYRYNEALDIYDQLIKLTPSSYIPWNSAGNMYRELGLLNKAYRCY 188
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP- 182
++ + P + N L A++Y ++ + W KRF S + D
Sbjct: 189 QKASALAPHNAIPYSNHLTALHYDPRASRTEIAAFAKSWEKRFAPEKSALSPRPARVDKS 248
Query: 183 -ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
+R L +G +S H V I L +V YS+ DA T R + +
Sbjct: 249 YQRHLKVGLLSDGLRNHPVGKMIVRCLENIPPNQMTLVAYSSSEIDDALTRRIKNQTH-- 306
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG-YPNT 300
W I +++ + +R+D+ID+L++L+GH A ++ +A QPAP+ V W+G NT
Sbjct: 307 --TWYPIRHLNDDDLVQQIRDDEIDVLIDLSGHNAGTRMRAIAMQPAPLLVKWVGGLINT 364
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TG+ IDY I+D + P + + E+LIRLP+ ++ + P + + PA NG+IT
Sbjct: 365 TGVQAIDYLISDHVETPGGEDEYYTEKLIRLPDDYIVFDPPAKLPALRELPAKRNGYITL 424
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
FNN K+ L+ WA I+ +P+SRL++K +P+ +S R +TLE G+ R+
Sbjct: 425 ACFNNPTKLNDVTLKQWAGIMHELPDSRLMLKGRPYTSESFCERLYATLEAAGIARERL- 483
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
++ N++ + AY+ DI+LD +PY+G TTCE+ MGVP VT+ G A + L
Sbjct: 484 IIEGPGSNYEMLDAYNRADIALDPWPYSGGLTTCEAFIMGVPVVTLPGPTFAGRHSATHL 543
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
G+ L+ + DEY ++LASD+ +L +R LRD++ +SPVCDG FA
Sbjct: 544 VHAGMPELVVNSWDEYRARVIELASDLESLGTIRQHLRDVLLQSPVCDGPRFAKHFTDAM 603
Query: 541 RNMWHRYCKGDVPS 554
R +W RYC P+
Sbjct: 604 RAIWQRYCDDKAPA 617
>gi|365894960|ref|ZP_09433091.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3843]
gi|365424291|emb|CCE05633.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3843]
Length = 739
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 264/526 (50%), Gaps = 7/526 (1%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P A + G + + D+A Y AL+I P +L + ++ + A
Sbjct: 221 IRPGVALVLAHRGRLRQQLGQFDQAKLDYDGALAIDPLLEVALLGHAQISVLKENVAPAM 280
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
+ K + NPT A+ LG + G I+ A+ +++ L+I PD +A ++ A+++
Sbjct: 281 AALRKILEQNPTSEVAWTWLGECFCKQGDIASALQHFDRALEIKPDYADAITAKIFALDF 340
Query: 147 INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
I + + A +W R +Q DPER + IGYVS D+ HS +
Sbjct: 341 IPDCDFAQHQAARHEWWTRIGSRMTQRQLQPRDLDPERIITIGYVSSDFRGHSAALAFLP 400
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
L + D ++V YS+ D T + R IW D + + ++++AA + D++D
Sbjct: 401 VLTHRDRAQFRVACYSSSPAQDGMTAQCR----AAADIWVDAWQMSDEELAARIEADQVD 456
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
ILV+L+GH+A N+L M A +PAP+QV+ G+P TGLPTIDY + D ++ PP + E
Sbjct: 457 ILVDLSGHSAGNRLTMFARKPAPIQVSAWGHPTGTGLPTIDYVLADPVSIPPSVRHLFAE 516
Query: 327 ELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
++ LP C + + E P L NG++TFG FN + KI+ L VWA ++ +P+
Sbjct: 517 QIHDLP-CMITMD-AIEGVHATGLPMLRNGYVTFGVFNRIDKISDAALGVWAEVMRQLPD 574
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
+R+V+K +R + G+ + R+ L DH+ ++ +DISLD FP
Sbjct: 575 ARIVIKNTALDDAYLRDGLIGRFVDHGITAERIACLGST-SRADHLAQFAAIDISLDPFP 633
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
G +T ESL+MGVP +T G+ + G +++T +GL +A+++ Y+ +A + +D
Sbjct: 634 QNGGASTWESLHMGVPVITKLGTTPSARAGGAVVTAIGLDDWVAEDDAGYLAIARRHVAD 693
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDV 552
LA LR L ++ S + + +E YR W RYC +
Sbjct: 694 TAGLARLRAELPQRIATSAAGNVALYTRKVEEGYRTFWRRYCAANA 739
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV+ E + D+A A P AEA NLG+ R +A + A++
Sbjct: 59 LHLLGVSALESGRLDVAEQALTQAVAAEPRHAEALANLGLALFSRKRYQEARTVQERAVA 118
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+PNF+ +L LG G ++ A + E+A+AA P YA+AY N G+ A+
Sbjct: 119 ARPNFAAALTGLGNTLMKLGLLEEALQAHERALAAKPNYADAYCNRGMAQVLLNRNVEAV 178
Query: 121 DAYEQCLKIDPDSRNA 136
++++ L ++P A
Sbjct: 179 GSFDRALALNPRQSEA 194
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LGV + LD A + A++ +P +++L NLG+ + + A +
Sbjct: 53 PDHFDALHLLGVSALESGRLDVAEQALTQAVAAEPRHAEALANLGLALFSRKRYQEARTV 112
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
E+A+AA P +A A LG G + A+ A+E+ L P+ +A NR +A +N
Sbjct: 113 QERAVAARPNFAAALTGLGNTLMKLGLLEEALQAHERALAAKPNYADAYCNRGMAQVLLN 172
Query: 149 E 149
Sbjct: 173 R 173
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+A ++ A E A P+ A A LG L++A++ ++ AL+
Sbjct: 93 LANLGLALFSRKRYQEARTVQERAVAARPNFAAALTGLGNTLMKLGLLEEALQAHERALA 152
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
KPN++ + N G+ + + A ++A+A NP +EA G++
Sbjct: 153 AKPNYADAYCNRGMAQVLLNRNVEAVGSFDRALALNPRQSEALFGKGLV 201
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
C Q L++ P+ +L+ LGV G++D A + + +A+AA P +AEA NLG+
Sbjct: 45 CAQT-LALVPDHFDALHLLGVSALESGRLDVAEQALTQAVAAEPRHAEALANLGL 98
>gi|78064817|ref|YP_367586.1| hypothetical protein Bcep18194_A3340 [Burkholderia sp. 383]
gi|77965562|gb|ABB06942.1| TPR repeat protein [Burkholderia sp. 383]
Length = 828
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 173/580 (29%), Positives = 269/580 (46%), Gaps = 44/580 (7%)
Query: 10 EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL 69
M +FD A+ E A +P A A LG + + +AV+ + A+ + P + +
Sbjct: 251 RMSEFDKAVELLERAIAIDPAHARAWAWLGDLRNQQGEYGQAVQACRHAIELDPELADAY 310
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL----------------------- 106
N LG Y ++ AA AI NP A+A+ NL
Sbjct: 311 NFLGFAYHNLNRLAAAELSYRHAIDLNPDDADAHQNLAAALLRLEKLDEALKHTEIAREL 370
Query: 107 -----------GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
G + G ++ A+DA+ ++ D A L M+ +
Sbjct: 371 GIDPLKLQMTLGDILWAKGDLAGALDAFRTAIRYD--LHRAYSRMLFNMSSSPAFEPQEW 428
Query: 156 FEAHRDWGKRFMR---LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
R +G+ R + + + RPL +G+VS D H V F+E+ L D
Sbjct: 429 VAEARRYGEHLERDAHPFEHDRAQRVARAQGRPLRVGFVSGDLRQHPVGIFLESVLARID 488
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+ Y V D T R R W+ + G+ ++ A ++R+D IDIL+++
Sbjct: 489 RSRIEPHAYVTFVGEDDVTARLRPNFAS----WKKVVGLGREEAAQLIRDDGIDILIDMA 544
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
GHT + L + +PAPVQ +W+G+ TTG IDY I D+ P + Q E RLP
Sbjct: 545 GHTDWSGLPIFGHKPAPVQASWLGFFATTGCRAIDYFIGDAHTLPADEAQHFTERPWRLP 604
Query: 333 ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
+ +LC+TP P V P P + +G +TFG F L KI+ +V+ +W+RIL A+P++ L++K
Sbjct: 605 DSYLCFTPPPYDVAVGPLPMVAHGGVTFGCFGKLIKISDEVVALWSRILHALPDAHLLLK 664
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
D V L+ + G+ + R+ +L ++ AY+ +D++L FPY G TT
Sbjct: 665 AHELGADDVNQATLNRFARHGIGADRL-ILEGGSPRAEYFAAYNRIDVALSPFPYPGGTT 723
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
T E+L+MGVP + M G ++ S+L G+ IA +ED Y+ A+ A D LA
Sbjct: 724 TAEALWMGVPVLGMKGGRFVTHICESVLHAAGMGDWIATDEDAYLTKAVAFARDRDRLAT 783
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDV 552
LR +LR + SP+CD FA LE MW Y G+
Sbjct: 784 LRATLRAQLLASPLCDASRFARNLEDALHGMWACYASGET 823
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+ ++ ++D I E + P A NNLG + ++ LD A+ Y+ A+
Sbjct: 41 LHFLGLLACQLKQYDAGIALMEQSLVARPD-ASYFNNLGNMLRESGRLDDAIAHYRRAVG 99
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
++P++ ++ NNLG + AA E +AI P YAEAYNNLG +D G
Sbjct: 100 LRPDYPEAHNNLGNALRDAREPTAAMESCARAIELRPGYAEAYNNLGNALQDLG 153
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 65/137 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E + D AI Y A P EA NNLG +D A+E A+ ++
Sbjct: 76 NLGNMLRESGRLDDAIAHYRRAVGLRPDYPEAHNNLGNALRDAREPTAAMESCARAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG G+ +AAA KA+A P YA+AY NLG A DA
Sbjct: 136 PGYAEAYNNLGNALQDLGEHEAAAASYAKAVAHQPQYADAYCNLGNALNAQEKFDDAADA 195
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + + + P R A Q
Sbjct: 196 YRRAIALQPGFRVAHQG 212
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
+P A+A L + + DKAVE + A++I P +++ LG + QG+ A
Sbjct: 234 LDPGDADAHCVLARLLQRMSEFDKAVELLERAIAIDPAHARAWAWLGDLRNQQGEYGQAV 293
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
+ AI +P A+AYN LG Y + ++ A +Y + ++PD +A QN A+
Sbjct: 294 QACRHAIELDPELADAYNFLGFAYHNLNRLAAAELSYRHAIDLNPDDADAHQNLAAAL 351
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + A+ A P AEA NNLG +D + A Y A++ +
Sbjct: 110 NLGNALRDAREPTAAMESCARAIELRPGYAEAYNNLGNALQDLGEHEAAAASYAKAVAHQ 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++ + NLG Q K D AA+ +AIA P + A+ L R AG + A+D
Sbjct: 170 PQYADAYCNLGNALNAQEKFDDAADAYRRAIALQPGFRVAHQGLSETLRAAGDLRGAVDH 229
Query: 123 YEQCLKIDPDSRNA 136
+ L DP +A
Sbjct: 230 AREGL--DPGDADA 241
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
L +A Y L+ +P +L+ LG++ + DA ++E+++ A P A +NNL
Sbjct: 19 RLAEAKTLYDAILTAQPGQPDALHFLGLLACQLKQYDAGIALMEQSLVARPD-ASYFNNL 77
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
G + R++G + AI Y + + + PD A N
Sbjct: 78 GNMLRESGRLDDAIAHYRRAVGLRPDYPEAHNN 110
>gi|115350208|ref|YP_772047.1| hypothetical protein Bamb_0152 [Burkholderia ambifaria AMMD]
gi|115280196|gb|ABI85713.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
AMMD]
Length = 828
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 182/588 (30%), Positives = 277/588 (47%), Gaps = 40/588 (6%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + M FD A +E A +P A A LG + + ++++ + A+ + P
Sbjct: 245 LGRSLRSMNDFDGAARLFERACEIDPGYAPAWCRLGELRCQQGEYEESLRLCRHAIELDP 304
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ + N LG+ Y +M A+ AI NP A+A++NL + A+ Y
Sbjct: 305 ELADAYNFLGLAYHNLDRMAASELSHRHAIDLNPDDADAHHNLAAALFRLDKLDEAMSEY 364
Query: 124 E--QCLKIDP--------DSRNAGQNRLLAMNYINEG--HD------------------- 152
Q L +DP D A ++ A+ E HD
Sbjct: 365 RIAQELGVDPVKIQLTLGDILWAKRDFSGAVAAFREAVEHDPHRAYARLLFNMSSSPAFA 424
Query: 153 --DKLFEAHR--DWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+ + +A R D+ R RL S + RPL +G+VS D H V F+E+ L
Sbjct: 425 PEEWVVDAQRYGDYLARDARLLSHDREQRARQARGRPLRVGFVSGDLRQHPVGIFLESVL 484
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+ D + Y V D T R + W+ + ++ + A M+ +D ID+L
Sbjct: 485 AHLDRTRIEPHAYVTFVVEDDVTARLKTGFAS----WKKLTCLNRDQAARMIHDDGIDVL 540
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V+L GHT + L + A +PAPVQ +W+G+ TTG IDY I D P + VE+
Sbjct: 541 VDLAGHTNWSGLPVFAHRPAPVQASWLGFFATTGCRAIDYFIGDPHTLPADEAHHFVEQP 600
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP+ +LC+TP V P P TNG +TFG F L KI+ V+ +W+R+L A+P++R
Sbjct: 601 WHLPDSYLCFTPPAYDVAVGPLPMATNGGVTFGCFGKLTKISDDVIALWSRLLHALPDAR 660
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L++K + L + G+ + ++ +L ++ AY+ +DI+L FPY
Sbjct: 661 LMLKAHELGASDLNRATLERFARHGIGAHQL-ILEGGSPRAEYFNAYNRIDIALSPFPYP 719
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G TTT E+L+MGVP + M G ++ SLL G+ IA +ED Y+ A+ A D
Sbjct: 720 GGTTTAEALWMGVPVIGMKGGRFVTHICESLLHAAGMGDWIAADEDAYLAKAIAFAGDRD 779
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLK 556
ALA LR +LR+ SP+CD FA LE + MW RY GD +
Sbjct: 780 ALAALRATLRERTLASPLCDAARFARNLEDAFHGMWARYVAGDTDGAR 827
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E + D AI Y A P EA NNLG +D + +A+ A+ ++
Sbjct: 76 NLGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMRSCSRAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG V G++DAAA KAIA +P YAEA++NLG + R + AI
Sbjct: 136 PGYAEAYNNLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHSNLGNVLRAQERHADAIVH 195
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE 149
Y + ++++P R A + +A+ ++
Sbjct: 196 YRRAIELNPALRVAHRGLAIALRATDD 222
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ A Y+ H P +A + LG++ D + + +L+ +P+ S NNL
Sbjct: 19 RLGEAKTLYDAILHAQPGQPDAMHFLGLLACQLKQYDAGLALMERSLAERPDASY-FNNL 77
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G + G++D A +A+A P Y EA+NNLG RDA + A+ + + +++ P
Sbjct: 78 GNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMRSCSRAIELRP 136
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 55/128 (42%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A+ A P AEA NNLG + +D LD A Y A++
Sbjct: 110 NLGNALRDARDPAEAMRSCSRAIELRPGYAEAYNNLGNVLQDLGELDAAAASYGKAIAFH 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ +NLG V Q + A +AI NP A+ L + R A++
Sbjct: 170 PAYAEAHSNLGNVLRAQERHADAIVHYRRAIELNPALRVAHRGLAIALRATDDFDGALEH 229
Query: 123 YEQCLKID 130
L+ D
Sbjct: 230 ARAGLEPD 237
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ + D A Y A F+P AEA +NLG + + ++ A+ Y+ A+ +
Sbjct: 144 NLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHSNLGNVLRAQERHADAIVHYRRAIELN 203
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + L + D A E + P AE + LG R A
Sbjct: 204 PALRVAHRGLAIALRATDDFDGALEHARAGL--EPDDAEGHCMLGRSLRSMNDFDGAARL 261
Query: 123 YEQCLKIDP 131
+E+ +IDP
Sbjct: 262 FERACEIDP 270
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + AIV Y A NP A L + + D+ D A+E + L +
Sbjct: 178 NLGNVLRAQERHADAIVHYRRAIELNPALRVAHRGLAIALRATDDFDGALEHARAGL--E 235
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ ++ LG D AA + E+A +P YA A+ LG L G ++
Sbjct: 236 PDDAEGHCMLGRSLRSMNDFDGAARLFERACEIDPGYAPAWCRLGELRCQQGEYEESLRL 295
Query: 123 YEQCLKIDPDSRNA 136
+++DP+ +A
Sbjct: 296 CRHAIELDPELADA 309
>gi|146341560|ref|YP_001206608.1| O-linked N-acetylglucosamine transferase [Bradyrhizobium sp. ORS
278]
gi|146194366|emb|CAL78390.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 278]
Length = 742
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/551 (31%), Positives = 277/551 (50%), Gaps = 11/551 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ GVA + FD A+ A NP A G Y++ +A + AL+
Sbjct: 196 LFGKGVASMNLRDFDAALAALNAALAINPKAAAVIAQRGRAYQELGRFAEAESDFDAALA 255
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P ++L V V G + + +I K +A NP A+ LGV G + AI
Sbjct: 256 LEPLLEEALCGKAAVTLVDGNIALSISVINKVLAQNPNSEIAWTLLGVCAAAQGDTATAI 315
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
D Y++ L I P+ +A ++ A++++ + ++L EA R W + + +
Sbjct: 316 DHYDRALAIRPNHEDAITKKIFALDFLPDTGVERLQEARRYWWEAIGSRLERRSLGVRNI 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+R LV+GYVS D+ HS ++ L +HD ++VV YS DAKT R V +
Sbjct: 376 DPDRRLVVGYVSSDFRDHSAAFAFLPILRHHDRAKFEVVAYSCSPMKDAKTELCRSLVDR 435
Query: 241 --KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+W D K+A ++ DK+DILV+L+GH+A ++L M A +PAP+QV+ +G
Sbjct: 436 FVDASLWGD------DKLADQIQADKVDILVDLSGHSAGHRLTMFARKPAPIQVSAVGSV 489
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TGLP +DY + D + P + E + LP L P P P P L NG +
Sbjct: 490 TGTGLPVMDYLLADPVVIPAAVRHLFAETIYDLPS--LITIEPPPPLPPSPLPMLRNGHV 547
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFG+FN + KI+ +++W++++ A P S +V+K +R R ++ G+ + R
Sbjct: 548 TFGAFNRIDKISEPTVKLWSQLMQATPGSIIVIKNHSMGDPLLRDRLIARFVAHGIAADR 607
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
V + +H+ ++ +DISLD FP G +T ESL MGVP VT GS A G +
Sbjct: 608 VRCVGKTT-RLEHLAMFAEIDISLDPFPQNGGISTWESLQMGVPVVTKLGSGPAARAGGA 666
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
++ VGL + +++D Y+ +A S LA LR L ++++S + + +E+
Sbjct: 667 IVKAVGLDEWVGEDDDGYLAIARSFCSRPAELAALRAELPAMVAQSAAGNNALYTQQVET 726
Query: 539 TYRNMWHRYCK 549
YR W YC+
Sbjct: 727 AYRTFWQDYCR 737
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV+ + FD A++ A +P A+ ++LG+ ++A ++ A++
Sbjct: 60 LHLLGVSERDCGHFDQAVLLLTRAVEIDPRSADVQSDLGLALSRLGRHEEARVRFERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPNF + +LG + + A ++AIA P +AEAY N G+ A
Sbjct: 120 LKPNFPSAFTHLGNALMSLFRFEEAISAHDRAIALKPDHAEAYANRGMALMFTSRNGEAA 179
Query: 121 DAYEQCLKIDP 131
+++ L + P
Sbjct: 180 QNFDRALSLQP 190
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A + LGV +D + D+AV A+ I P + ++LG+ + G+ + A
Sbjct: 54 PQHLGALHLLGVSERDCGHFDQAVLLLTRAVEIDPRSADVQSDLGLALSRLGRHEEARVR 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
E+AIA P + A+ +LG AI A+++ + + PD A NR +A+ + +
Sbjct: 114 FERAIALKPNFPSAFTHLGNALMSLFRFEEAISAHDRAIALKPDHAEAYANRGMALMFTS 173
Query: 149 E 149
Sbjct: 174 R 174
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG+A + + + A V +E A P+ A +LG ++A+ + A+++K
Sbjct: 96 DLGLALSRLGRHEEARVRFERAIALKPNFPSAFTHLGNALMSLFRFEEAISAHDRAIALK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
P+ +++ N G+ + AA+ ++A++ P A GV
Sbjct: 156 PDHAEAYANRGMALMFTSRNGEAAQNFDRALSLQPRLLTALFGKGV 201
>gi|421471789|ref|ZP_15920043.1| bacterial transcriptional activator domain protein [Burkholderia
multivorans ATCC BAA-247]
gi|400224616|gb|EJO54837.1| bacterial transcriptional activator domain protein [Burkholderia
multivorans ATCC BAA-247]
Length = 779
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 265/510 (51%), Gaps = 13/510 (2%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
+ L +A + + L ++P+ +++L G+V + D A +A+ P A
Sbjct: 257 NRLAEADDTCRRLLELRPDHAEALRIHGLVLFALRRADEAIAACRRAVELAPNAAAPNGT 316
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165
LG L + G+ A+ + ++IDP + L + + ++ L HR +G+R
Sbjct: 317 LGFLLLELGATQEALGWLRRAIEIDPTDSVTHSSMLFCLAHSSDLDPQALVAEHRKFGQR 376
Query: 166 FM-RLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVV--YS 222
+ R + ++ N++DP R L +G+VS D F H+V+ + P++ H + + + Y
Sbjct: 377 YEDRKRKRAAAFSNSRDPARRLRVGFVSGDLFNHAVASY-AVPVIEHLAADTGIAMPFYH 435
Query: 223 AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGM 282
V+ D + RF K G WR++ G+ + VR D+IDI ++L+GHT N+L
Sbjct: 436 NHVEEDQTSERF--KACAAG--WRNVAGMSDHAFLERVRSDRIDIAIDLSGHTGRNRLVA 491
Query: 283 MACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET-KQKHVEELIRLPECFLCYTPS 341
+A + APVQ +WIGYP TTGL ++DY +TD P + VE+++RLP + P
Sbjct: 492 LAQRAAPVQASWIGYPATTGLASMDYYLTDRFVAPHGVFDDQFVEQIVRLP-AIAPFMPP 550
Query: 342 PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
P PV PAL NG+ T+GSFN L K++P+V+ VWAR+L A P +R+ + D
Sbjct: 551 PHCPPVNALPALHNGYTTYGSFNRLNKLSPRVVAVWARVLHADPTARMALGAIGNAGD-- 608
Query: 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
+ G+++ R+ P + +MQ + +D+ LD FPY G+TTT +L+MGV
Sbjct: 609 QRTLTEWFAAAGIDASRLTFHPRSNIP-VYMQQHHGVDLCLDAFPYTGSTTTLNALWMGV 667
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P VT+ GS A L V L IAK+ED++V A+ L D AL LR LR
Sbjct: 668 PTVTIPGSTVAGRGSAGWLQHVRLDEYIAKDEDDFVAKAVALGRDTAALHVLRTGLRARC 727
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
++S A GL S R MW R+C G+
Sbjct: 728 AQSAAFRPAVVAAGLSSALRTMWRRWCAGE 757
>gi|296445273|ref|ZP_06887232.1| Tetratricopeptide TPR_2 repeat protein [Methylosinus trichosporium
OB3b]
gi|296257228|gb|EFH04296.1| Tetratricopeptide TPR_2 repeat protein [Methylosinus trichosporium
OB3b]
Length = 725
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 256/537 (47%), Gaps = 5/537 (0%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
+D A+ + A + + A LGV + +A ++MA + P+ + G
Sbjct: 181 YDRAVDDLQAAAALDSNNYRAMLELGVDFGAAARDQQAARLFEMAAKVAPDVALPQYAFG 240
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ I++AIA +P E + G G I A+ +Y + + PDS
Sbjct: 241 QFLINHRFYEKGLRYIDRAIALDPLQPEHHIGHGFGLLGQGRIDEAVASYRRACALAPDS 300
Query: 134 RNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFM-RLYSQYTSWDNTKDPERPLVIGYVS 192
NA L A+ + +L EAH W + ++DN DP R IG VS
Sbjct: 301 ANAAGTLLFALQHYPSVTKRELLEAHEKWAALYRPSAPRDRLAFDNDPDPTRKPRIGVVS 360
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D H+ ++ Y++ Y + R K + W D+ ++
Sbjct: 361 ADMHRHAAAFLTLRAFEQLAAFGYEIYCYKTDATREDDDFSARYKAAAQS--WNDVSDLE 418
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD 312
+ AA++ + +IDIL +L+GHTA N+L + A + AP+Q+ W GY T GL T D I D
Sbjct: 419 DDAFAALIEQHRIDILFDLSGHTAGNRLAVFARRAAPIQLGWAGYVGTVGLDTYDGLIAD 478
Query: 313 SLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPK 372
+ PP+ + + E +IRLP+C++CY P A V P PAL +G +TFG FN AKI P+
Sbjct: 479 PVEIPPQDDEFYTEPVIRLPDCYVCYHPPTSAPDVAPLPALASGAVTFGCFNRPAKINPE 538
Query: 373 VLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
V + WARI+ +P +R+++ + + LEQ GL V+L+ D +
Sbjct: 539 VGRAWARIVEQIPGARILMVYGGLDESATQEALYRVLEQGGLSRAHVELVGRT-EQRDLL 597
Query: 433 QAYS-LMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
Y+ +D++LDTFPY+ TT E+++MGVP VT G A S LT GL +
Sbjct: 598 DFYNERVDLALDTFPYSAGVTTLEAMWMGVPTVTYVGDTFAGRHAASHLTAAGLGDFCTR 657
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+ D+YV LA+ A LA LR LR+ ++ SP+ D F L + +W R+C
Sbjct: 658 SIDDYVALAVDWAKRPQDLAALRAGLRETIAASPLNDQLRFGRNLSNELERLWTRWC 714
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 53/132 (40%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
GVA +FD AI +E P + +G + V Q L++ PN
Sbjct: 70 GVALCRSDRFDEAIAAFERELAVTPDHPRSLTEIGTCLARTGRTRQGVPFLQRGLALTPN 129
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ +LG+ + + A +++A+ + +A+AY G+ G A+D +
Sbjct: 130 LPLAQYSLGLALLTENRRAEALAALDRALTLDGAFADAYRTRGLARVMQGDYDRAVDDLQ 189
Query: 125 QCLKIDPDSRNA 136
+D ++ A
Sbjct: 190 AAAALDSNNYRA 201
>gi|167582750|ref|ZP_02375624.1| TPR domain protein [Burkholderia thailandensis TXDOH]
Length = 781
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 274/511 (53%), Gaps = 25/511 (4%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
+ +KP+ +++ LG+V Q + + A + +A+ P A A LGV+ + G++
Sbjct: 275 IEMKPDNAEAHRMLGLVLHAQRRYEEAVAVCRRAVELAPNAAPANGTLGVVLLEQGNVHE 334
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWD 177
AI + ++IDP L A+ + + +L E HR +G+R R+ + +
Sbjct: 335 AIGRLRRAVEIDPTDSVTHSAMLFALVHDDAVDPAQLLEEHRVFGRRHEARVTVKPHA-- 392
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYH--DYQNYKVVVYSAVVKADAKTIRFR 235
N++DP R L +G +S D H+V+ +++ P++ H D + +Y + D T + R
Sbjct: 393 NSRDPARQLKVGIISGDLLAHAVAAYLQ-PVIDHLADDPTLSLHIYYNYLVEDQITAQLR 451
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
EKV W ++ + + + +R D+IDI+++L+GHT N+L +A +PAP+Q +WI
Sbjct: 452 EKVPA----WDNVTNVSDADLVEKIRRDRIDIMIDLSGHTGRNRLVALAHKPAPIQASWI 507
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKH-VEELIRLPECFLCYTPSPEAGPVCPTPALT 354
GYP TTGL IDY ++DS+ PP H +E+++R+ Y P P PV PAL
Sbjct: 508 GYPATTGLKAIDYYLSDSVITPPGEMDDHFIEKIVRM-PALAPYLPPPHCPPVNGLPALR 566
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
NG++T+GSFN L K+ V+ +W+++L A P++R+V+ D R + G+
Sbjct: 567 NGYVTYGSFNRLNKLRQNVIALWSQVLLATPSARMVIGSIEQEGD--RETIIEWFVSEGI 624
Query: 415 ESLRVDL-----LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
+ R+ +P+ L H H +D+ LD FPYAG+TTT +L+MGVP VT++G
Sbjct: 625 DPHRLTFQPRAAMPVYLQQHHH------VDVCLDAFPYAGSTTTLNALWMGVPTVTLSGK 678
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
S L+ VGL IA +++ +V+ ++ A D+ AL LR+ +R+ S
Sbjct: 679 SIPSRGSASWLSHVGLTEYIAHDQESFVRTSIAAAQDLDALNRLRLGMRERCLASAPFQP 738
Query: 530 QNFALGLESTYRNMWHRYCKGDVPSLKRMEM 560
A GL + R MW R+C+G P+ +E+
Sbjct: 739 NTVARGLSAALRMMWKRWCEGLSPAAFEVEL 769
>gi|456354097|dbj|BAM88542.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Agromonas oligotrophica S58]
Length = 737
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 255/524 (48%), Gaps = 11/524 (2%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
+P A G Y D+A + AL+ P+ +L LG + K D A
Sbjct: 222 ISPDAASVLAERGRAYLQAGRFDQAKADFDAALAHAPDLEAAL--LGRAHLGVDKNDVAP 279
Query: 87 EMI--EKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
+ K + NP A+ LG Y G I A+ ++ L + PD R+A ++ +
Sbjct: 280 AVAACRKVLEQNPNSEAAWTWLGGCYAKQGEIDAALQHFDHALALKPDCRDAIAAKIFTL 339
Query: 145 NYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFI 204
+++ + + R+W +R + DPER LVIGYVS D+ HS ++ +
Sbjct: 340 DFLPDADFARQQAVRREWWERIGARLPRAALSPRNMDPERRLVIGYVSADFRNHSAAFTV 399
Query: 205 EAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDK 264
L +HD ++V+ Y+ + D T R R +W + + + + +A ++ D
Sbjct: 400 LPVLSHHDRARFQVICYTCSARQDEITARCR----AAADVWVEAWQMSDGDLADRIQADG 455
Query: 265 IDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH 324
+DILV+L+GH+A N+L + A +PAP+QVT G+ TGLPTIDY D + P +
Sbjct: 456 VDILVDLSGHSAGNRLTLFASKPAPIQVTAWGHGTGTGLPTIDYFFADPVTVPSGVRHLF 515
Query: 325 VEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAV 384
E++ LP + P P A P P L G +TFG FN + KI+ L VWAR++ +
Sbjct: 516 AEQVYDLP-AVITTDPLPGA-PSTTLPMLRTGHVTFGVFNRIDKISDAALAVWARLMALL 573
Query: 385 PNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
P+SR+V+K + +R ++ G+ + RV L H+ ++ +DISLD
Sbjct: 574 PDSRIVIKNSAIDDNFLREGLIARFVAHGVAAERVICLGST-TREQHVAQFAHVDISLDP 632
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
FP G +T ESL GVP V G A ++ T +GL +A ++D Y+ +AL+ A
Sbjct: 633 FPQNGGVSTWESLQAGVPVVARLGCSTASRAAAAINTALGLDDWVAGDDDGYLAIALKHA 692
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+D LA LR L ++ S + + + +E YR W RYC
Sbjct: 693 ADTAELARLRAELPARVATSAAGNVETYTRKVEEGYRQFWRRYC 736
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ M + A E A P+ N+LG + ++A+ Y AL++K
Sbjct: 96 NLGIVLSNMGRHAEARGHQERAVALVPNFFAGWNSLGSTLLRLEQAEQAIAAYDRALALK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ N G+ + + A + ++A+A NP Y +A + G++ + A+ A
Sbjct: 156 PDYAEAHCNRGMALLLVDRSAEALQSFDRALAFNPRYVQALHGKGMVNLGLRRVDAALAA 215
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
++ L I PD+ + R A Y+ G D+
Sbjct: 216 FDAALAISPDAASVLAERGRA--YLQAGRFDQ 245
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A +P +A NLG++ + +A + A+++ PNF N+LG + +
Sbjct: 83 AVEVDPRDVDAHANLGIVLSNMGRHAEARGHQERAVALVPNFFAGWNSLGSTLLRLEQAE 142
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A ++A+A P YAEA+ N G+ + A+ ++++ L +P
Sbjct: 143 QAIAAYDRALALKPDYAEAHCNRGMALLLVDRSAEALQSFDRALAFNP 190
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
A+ + P + NLG+V + G+ A E+A+A P + +N+LG
Sbjct: 83 AVEVDPRDVDAHANLGIVLSNMGRHAEARGHQERAVALVPNFFAGWNSLGSTLLRLEQAE 142
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
AI AY++ L + PD A NR +A+ ++
Sbjct: 143 QAIAAYDRALALKPDYAEAHCNRGMALLLVDR 174
>gi|427431488|ref|ZP_18920886.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Caenispirillum salinarum AK4]
gi|425877808|gb|EKV26537.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Caenispirillum salinarum AK4]
Length = 857
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 218/396 (55%), Gaps = 20/396 (5%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+SPD+ +HS+ FI+ L +HD +V Y+ + D T ++ V W
Sbjct: 475 LRIGYMSPDFRSHSMINFIKPFLNHHDRDAVEVYAYAELRLGDKDTQHVQDTVDG----W 530
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ ++ VAA +R D +DILV+L GHT+NN+L + +PAP TW+GY TT +P
Sbjct: 531 FLTTRVKDEDVAARIRADNVDILVDLAGHTSNNRLNVFPYRPAPASATWLGYLYTTAVPG 590
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEA-GPVCPTPALTNGFITFGSFN 364
+DY I D + PPE+ E L+RLP CYTPSP+A + P PA T G ITFG+ +
Sbjct: 591 VDYFIGDHITSPPESAHVFSEHLVRLPHYLACYTPSPKAPEAISPLPADTRGHITFGNAS 650
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVK----CKPFCCDSVRHRFLSTLEQLGLESLRVD 420
L ++ P+VL+ WA IL P +RL + +C D +R R L + G RVD
Sbjct: 651 RLIRLNPRVLRSWAEILNRTPEARLRLDHPDYGDAWCADYMRKR----LAEAGAPMDRVD 706
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+L + D+ Y +DI LDTFP+A TTTCES+YMGVP + +A +G +++
Sbjct: 707 ----VLNSGDYWGFYGEVDIVLDTFPHASGTTTCESMYMGVPVLAIADRPPVGRLGAAMV 762
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VG I + EY++ A+ +A D+ L +R +LRD + +S +CDG F LE+ Y
Sbjct: 763 DTVGHPEWIGWSIPEYIRKAVLMAGDLDRLRAVRGTLRDELLRSAICDGARFTRNLEAAY 822
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEP 576
R MW C G K +++ + S EP+ P
Sbjct: 823 REMWKNACDG---RHKAIDLFEDASTSREPTAALAP 855
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++NLG G + A+ P A LG++ ++AV L
Sbjct: 60 LFNLGDLKGAEARLRQAV-------QAAPGFVTAWFALGLMLVKTQRYEEAVTPLTTVLD 112
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P+ + NL G AA + +A+ NP YNN+G L +DA A+
Sbjct: 113 LSPDHEGATFNLAKAMDETGDAAAAIRLYARALEINPRNGRTYNNIGTLLKDAERDDAAL 172
Query: 121 DAYEQCLKIDPD 132
+ + + +++P+
Sbjct: 173 ENFLKATEVEPN 184
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 46/118 (38%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LG+ + +++ A+ +P A NL + + A+ Y AL I
Sbjct: 88 FALGLMLVKTQRYEEAVTPLTTVLDLSPDHEGATFNLAKAMDETGDAAAAIRLYARALEI 147
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
P ++ NN+G + + DAA E KA P E + N + +LA
Sbjct: 148 NPRNGRTYNNIGTLLKDAERDDAALENFLKATEVEPNVVEGWVNAAYMAEKKEDFALA 205
>gi|170698736|ref|ZP_02889801.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
IOP40-10]
gi|170136361|gb|EDT04624.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
IOP40-10]
Length = 828
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 181/588 (30%), Positives = 276/588 (46%), Gaps = 40/588 (6%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + M FD A +E A +P A A LG + + ++++ + A+ + P
Sbjct: 245 LGRSLRSMNDFDGAARLFERACEIDPGYAPAWCRLGELRCQQGEYEESLRLCRHAIELDP 304
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ + N LG+ Y +M A+ AI NP A+A++NL + A+ Y
Sbjct: 305 ELADAYNFLGLAYHNLDRMAASELSHRHAIDLNPDDADAHHNLAAALFRLDKLDEAMSEY 364
Query: 124 E--QCLKIDP--------DSRNAGQNRLLAMNYINEG--HD------------------- 152
Q L +DP D A ++ A+ E HD
Sbjct: 365 RIAQELGVDPVKIQLTLGDILWAKRDFAGAVAAFREAVEHDPHRAYARLLFNMSSSPAFA 424
Query: 153 --DKLFEAHR--DWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+ + +A R D+ R RL S + RPL +G+VS D H V F+E+ L
Sbjct: 425 PEEWVVDAQRYGDYLARDARLLSHDREQRARQARGRPLRVGFVSGDLRQHPVGIFLESVL 484
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+ D + Y V D T R + W+ + ++ + A M+ +D ID+L
Sbjct: 485 AHLDRTRIEPHAYVTFVVEDDVTARLKSGFAS----WKKLTCLNRDQAARMIHDDGIDVL 540
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V+L GHT + L + A +PAPVQ +W+G+ TTG IDY I D P + VE+
Sbjct: 541 VDLAGHTNWSGLPVFAHRPAPVQASWLGFFATTGCRAIDYFIGDPHTLPADEAHHFVEQP 600
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP+ +LC+TP V P P T G +TFG F L KI+ V+ +W+R+L A+P++R
Sbjct: 601 WHLPDSYLCFTPPAYDVAVGPLPMATGGGVTFGCFGKLTKISDDVIALWSRLLHALPDAR 660
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L++K + L + G+ + ++ +L ++ AY+ +DI+L FPY
Sbjct: 661 LMLKAHELGASDLNRATLERFARHGIGAHQL-ILEGGSPRAEYFNAYNRIDIALSPFPYP 719
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G TTT E+L+MGVP + M G ++ SLL G+ IA +ED Y+ A+ A D
Sbjct: 720 GGTTTAEALWMGVPVIGMKGGRFVTHICESLLHAAGMGDWIAADEDAYLAKAIAFARDRD 779
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLK 556
ALA LR +LR+ SP+CD FA LE + MW RY GD +
Sbjct: 780 ALAALRATLRERTLASPLCDAARFARNLEDAFHGMWARYVAGDTDGTR 827
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E + D AI Y A P EA NNLG +D + +A++ A+ ++
Sbjct: 76 NLGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMQSCSRAIELR 135
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG V G++DAAA KAIA +P YAEA++NLG + R + AI
Sbjct: 136 PGYAEAYNNLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHSNLGNVLRAQDRHADAIVH 195
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE 149
Y + ++++P R + +A+ ++
Sbjct: 196 YRRAIELNPALRVVHRGLAIALRATDD 222
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
+A+ + + A Y+ H P +A + LG++ D + + +L+ +P+
Sbjct: 12 LAHHQAGRLGEAKTLYDAILHAQPGQPDAMHFLGLLACQLKQYDAGLALMERSLAARPDA 71
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
S NNLG + G++D A +A+A P Y EA+NNLG RDA + A+ + +
Sbjct: 72 SY-FNNLGNMLRECGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARDPAEAMQSCSR 130
Query: 126 CLKIDP 131
+++ P
Sbjct: 131 AIELRP 136
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P AE LG + ++ D A ++ A I P ++ + LG + QG+ + +
Sbjct: 234 LEPDDAEGHCALGRSLRSMNDFDGAARLFERACEIDPGYAPAWCRLGELRCQQGEYEESL 293
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
+ AI +P A+AYN LG+ Y + ++ + ++ + ++PD +A N A+
Sbjct: 294 RLCRHAIELDPELADAYNFLGLAYHNLDRMAASELSHRHAIDLNPDDADAHHNLAAALFR 353
Query: 147 INEGHDDKLFEA 158
+ DKL EA
Sbjct: 354 L-----DKLDEA 360
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 3/156 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A+ A P AEA NNLG + +D LD A Y A++
Sbjct: 110 NLGNALRDARDPAEAMQSCSRAIELRPGYAEAYNNLGNVLQDLGELDAAAASYGKAIAFH 169
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ +NLG V Q + A +AI NP + L + R A++
Sbjct: 170 PAYAEAHSNLGNVLRAQDRHADAIVHYRRAIELNPALRVVHRGLAIALRATDDFDGALEH 229
Query: 123 YEQCLKIDPDSRNAGQNR-LLAMNYINEGHDDKLFE 157
L+ D + R L +MN + +LFE
Sbjct: 230 ARAGLEPDDAEGHCALGRSLRSMNDFDGA--ARLFE 263
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 32/166 (19%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ + D A Y A F+P AEA +NLG + + +D A+ Y+ A+ +
Sbjct: 144 NLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHSNLGNVLRAQDRHADAIVHYRRAIELN 203
Query: 63 P-----------------NFSQSLNN---------------LGVVYTVQGKMDAAAEMIE 90
P +F +L + LG D AA + E
Sbjct: 204 PALRVVHRGLAIALRATDDFDGALEHARAGLEPDDAEGHCALGRSLRSMNDFDGAARLFE 263
Query: 91 KAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
+A +P YA A+ LG L G ++ +++DP+ +A
Sbjct: 264 RACEIDPGYAPAWCRLGELRCQQGEYEESLRLCRHAIELDPELADA 309
>gi|254250922|ref|ZP_04944240.1| hypothetical protein BDAG_00087 [Burkholderia dolosa AUO158]
gi|124893531|gb|EAY67411.1| hypothetical protein BDAG_00087 [Burkholderia dolosa AUO158]
Length = 765
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 188/610 (30%), Positives = 297/610 (48%), Gaps = 76/610 (12%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + D A Y+ A +P A+AC N G +++ + LD A+ Y+ A+ ++
Sbjct: 159 NLGNALQDKGELDAAARAYDKAIALDPAYADACFNQGNVFRAQGRLDDAIARYRRAIGLQ 218
Query: 63 PNFS--------------------------------QSLNNLGVVYTVQGKMDAAAEMIE 90
P SL NL G ++ A +
Sbjct: 219 PQLHAAHHALGVLLFERGELDAAIASLRCAAQSGEVDSLFNLAAALDRAGDLEGAVASLR 278
Query: 91 KAIAANPTYAEAYNNLG-VLYR--------DAGSISLA---------------------I 120
+A+AA P A+ +++L L R D+ I+L+ I
Sbjct: 279 RALAAAPDRADLHHHLAQTLVRQGKRREALDSCRIALSLPNPTAQMHAVMGDILCALWHI 338
Query: 121 DA----YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
DA Y++ L++DP RNA R+ + +L E R +G +++ +Q +
Sbjct: 339 DAGLASYDRALELDPAFRNAHSGRMFHGAGTDRLSPAQLLEQARAFG---VQMAAQASPL 395
Query: 177 DNTKDPER--PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRF 234
+ R PL +G+VS D +H V+ F+ + + D ++ Y+ D T
Sbjct: 396 RHAPRAARGRPLRVGFVSGDLRSHPVAVFLRSIVAAIDPARIELAAYATQSAEDDTTAAL 455
Query: 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTW 294
+ +WRDI +D++ AA++ +D+ID+LV+L+GHTA N+L + A +PAPVQ TW
Sbjct: 456 KRHF----ALWRDITALDDRAAAALIADDRIDVLVDLSGHTALNRLPLFAWKPAPVQATW 511
Query: 295 IGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT 354
+GY TTG+ IDY I D P + VE RLP+ +LC+TP + V P PA
Sbjct: 512 LGYFATTGIAEIDYVIGDRHVLPDDEASHFVERPWRLPDSYLCFTPPDQPLEVGPLPAER 571
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
NGF+TFG NN KI V+ +WAR+L AVP +RL++K ++R + G+
Sbjct: 572 NGFVTFGCLNNANKIGAPVVALWARVLHAVPGARLLLKSAQLDEAALRDGLSARFAAHGI 631
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
+ R+ +L H+ ++ +DI LD FPY G TT+ E L+MG P VT G +
Sbjct: 632 GAERL-MLRGGSKRLAHIGTFNDIDIVLDPFPYPGGTTSMEGLWMGAPFVTRRGDRFLSH 690
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
+G S+L +G+ IA ++ EYV A A D+ LA +R LR+ + +SP+CD + FA
Sbjct: 691 IGESILHTLGMPEWIAHDDAEYVAKAAAFARDLPKLAAVRAGLRERLLRSPLCDARRFAR 750
Query: 535 GLESTYRNMW 544
LE+ + M+
Sbjct: 751 HLEAAFVQMF 760
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 8 YGEMLK----FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G ML+ D AI Y A P AEA +NLG +D + D A+ AL+++P
Sbjct: 92 FGNMLRAHGRLDDAIAAYRRATALAPGYAEAHSNLGNALRDARDPDAAMLSCAHALALRP 151
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++ + NNLG +G++DAAA +KAIA +P YA+A N G ++R G + AI Y
Sbjct: 152 DYAPAYNNLGNALQDKGELDAAARAYDKAIALDPAYADACFNQGNVFRAQGRLDDAIARY 211
Query: 124 EQCLKIDP 131
+ + + P
Sbjct: 212 RRAIGLQP 219
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + D A++ A P A A NNLG +D+ LD A Y A+++
Sbjct: 125 NLGNALRDARDPDAAMLSCAHALALRPDYAPAYNNLGNALQDKGELDAAARAYDKAIALD 184
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P ++ + N G V+ QG++D A +AI P A++ LGVL + G + AI
Sbjct: 185 PAYADACFNQGNVFRAQGRLDDAIARYRRAIGLQPQLHAAHHALGVLLFERGELDAAI 242
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
NN G + + LD A+ Y+ A ++ P ++++ +NLG DAA A+A
Sbjct: 90 NNFGNMLRAHGRLDDAIAAYRRATALAPGYAEAHSNLGNALRDARDPDAAMLSCAHALAL 149
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
P YA AYNNLG +D G + A AY++ + +DP
Sbjct: 150 RPDYAPAYNNLGNALQDKGELDAAARAYDKAIALDP 185
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N +A+ + + D A V YE P +A + LG++ + + A++++
Sbjct: 24 NTALAHHQAGRLDDARVLYEAIRRDAPDHPDATHFLGLLACQLGQFPAGLALMERAIALR 83
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ LNN G + G++D A +A A P YAEA++NLG RDA A+ +
Sbjct: 84 AD-PVYLNNFGNMLRAHGRLDDAIAAYRRATALAPGYAEAHSNLGNALRDARDPDAAMLS 142
Query: 123 YEQCLKIDPD 132
L + PD
Sbjct: 143 CAHALALRPD 152
>gi|260888508|ref|ZP_05899771.1| putative tetratricopeptide repeat-containing domain protein
[Selenomonas sputigena ATCC 35185]
gi|330838185|ref|YP_004412765.1| TPR repeat-containing protein [Selenomonas sputigena ATCC 35185]
gi|260861705|gb|EEX76205.1| putative tetratricopeptide repeat-containing domain protein
[Selenomonas sputigena ATCC 35185]
gi|329745949|gb|AEB99305.1| TPR repeat-containing protein [Selenomonas sputigena ATCC 35185]
Length = 1683
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 245/451 (54%), Gaps = 34/451 (7%)
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
A+E ++ D ++ N L A++Y+ E + +A R +G+ F + +
Sbjct: 699 AFESAETLE-DKASSWSNYLFALHYV-ERESQFMLDAARRYGELFKGVPRM------KRA 750
Query: 182 PER--PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
P+R + IGY+SPD+ H V+ F A + D ++V YS A ++
Sbjct: 751 PKRRGKIRIGYISPDFTFHIVALFSFAFFTHFDKSRFEVFGYSL-----AGENAMAAELS 805
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
WR + G ++A +R D+IDIL +L GH+ANN L ++A +PAPVQ++ IGY +
Sbjct: 806 SHASAWRYVGGGTPAEIAERIRADEIDILFDLAGHSANNALPVLALRPAPVQISGIGYFD 865
Query: 300 TTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPS--PEAGPVCPTPALTNG 356
TTGL +DY +TD+ DP E E+L+RLPE LCY S E + P PA G
Sbjct: 866 TTGLSAVDYFLTDAYIDPMGENDGCFTEKLLRLPESHLCYRASRAGEKSRIAPLPAREKG 925
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+ITFGSFNN AK+T +VL +WA+IL AVP SRL +K F R L LE G
Sbjct: 926 YITFGSFNNFAKVTDRVLHLWAKILRAVPRSRLFLKTAVFDASDGREEALRRLEAAG--- 982
Query: 417 LRVDLLPLILLNH--DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
+DL + H +++ AY +DI+LDTFPY G TTC++LYMGVP VT+AG H
Sbjct: 983 --IDLARIRTEGHTAEYLVAYGEVDIALDTFPYPGGGTTCDALYMGVPVVTLAGVRHGAR 1040
Query: 475 VGVSLLTKVGLKHL-IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
G S+L +GL A DEYV+ A LA+DV ALA LR +LR M SP+ D +
Sbjct: 1041 FGASILANLGLADACCAHTADEYVEKACVLAADVAALAVLRRTLRTRMEASPLMDAARYM 1100
Query: 534 LGLESTYRNMW--------HRYCKGDVPSLK 556
L LE+ Y +W + C+ VP L+
Sbjct: 1101 LHLEAAYEKIWAHKLGEDSKKQCRKLVPRLQ 1131
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 232/451 (51%), Gaps = 27/451 (5%)
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDY 195
A N L A++++ + ++ AH +G+ F R + + + R + IGY+SPD
Sbjct: 153 AWSNVLFALHFLRVPQQE-VYRAHCAYGELF-RAVTPFLH--RCRQKRRKIRIGYISPDL 208
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H V F EA +++ + ++V Y + + ++M+ WR+I + ++
Sbjct: 209 RHHVVLRFAEALFTHYNAERFEVYCYQNGPEDEES-----RRIMRLVDAWRNISPLSPQE 263
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
A + ED ID+LV+L GHT L ++ +PAPVQ++ IGY TTGLP +DY I D
Sbjct: 264 AARRIYEDDIDVLVDLAGHTRGTGLPVLVHRPAPVQMSGIGYFATTGLPAVDYMIGDVWL 323
Query: 316 D--PPETKQK--HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITP 371
D P K+ E+L+ L LCYTP A P L GF+TFGSFN AK +
Sbjct: 324 DGAPAGIKEAPFFTEKLLVLSHTHLCYTPEAGAPLAGAAPCLRKGFVTFGSFNAFAKASD 383
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
+ L WA+IL AVP SRL++K F + L L+ G+E RV+L P ++
Sbjct: 384 ETLAAWAQILAAVPQSRLLLKSAAFSSEEGCTAALERLQAAGIEPARVELRPD---TREY 440
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
+ Y +DI+LDTFPY G TT ++LYMGVP VT+ G H G S+L +GL+ L A
Sbjct: 441 LHEYHDVDIALDTFPYPGGGTTFDALYMGVPVVTLKGDSHGTRFGCSILANLGLEDLAAA 500
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
+ YV+ A LA D LA L +LR +M KSP+ DG ++ LE Y
Sbjct: 501 DAASYVETAAALAEDTELLAALHRNLRPMMEKSPLMDGASYVAALEVGYE---------- 550
Query: 552 VPSLKRMEMLQQQVVSEEPSKFSEPTKIIFA 582
+L + Q + EE ++ + K FA
Sbjct: 551 -AALTAHDAAQTAISPEEAARLAVALKRFFA 580
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 211/408 (51%), Gaps = 15/408 (3%)
Query: 135 NAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS-QYTSWDNTKDPERPLVIGYVSP 193
A + LLA++ G ++ LF AHR + K + +W KD E+ + IGY+SP
Sbjct: 1275 EAYSSHLLALHNTAIGQEE-LFAAHRGYEKLLAGIEPLAERAW---KDHEK-IRIGYLSP 1329
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDE 253
D+ H + FI V D ++V YS + D F E + + WR++ G+
Sbjct: 1330 DFRCHVMFSFIYGLFVRFDRTRFEVYAYSLAEEEDG----FTEALKEHATAWRNVAGLSF 1385
Query: 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS 313
++A +R D+ID+LV+L GH+A L ++A +PAPVQV+ +GY NTTGL +DY +TD
Sbjct: 1386 AEIAERIRADEIDVLVDLAGHSAGGALPVLAYRPAPVQVSGLGYVNTTGLSAVDYFLTDD 1445
Query: 314 LADP-PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPK 372
+ DP EE + L FL YT A P G + FG FN+ K+T +
Sbjct: 1446 IVDPLGRHDALFTEEPVCLTSQFL-YTAKSAAPEPSGAPCRKAGHVVFGVFNHWYKVTEE 1504
Query: 373 VLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
+L W IL VP SRL VKC+ +R L + + ++ RVDL P D+M
Sbjct: 1505 MLFCWREILERVPKSRLFVKCQELFAPKMREEVLRRMAKAQIDIERVDLEP---ATSDYM 1561
Query: 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKN 492
+ Y +DI+LDT+PY G TTC++LYMG+P VT G G+SLL VGL L A +
Sbjct: 1562 ERYRTVDIALDTYPYPGGGTTCDALYMGIPVVTRYGRRRGTRFGLSLLKNVGLSELAAAD 1621
Query: 493 EDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
Y++ A+ LA + L L +L SPV ++ LE Y
Sbjct: 1622 ARTYIEKAVALAHEADLLDELHRTLHARFIASPVMQTPHYMEELERFY 1669
>gi|167620865|ref|ZP_02389496.1| TPR domain protein [Burkholderia thailandensis Bt4]
Length = 781
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 273/511 (53%), Gaps = 25/511 (4%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
+ +KP+ +++ LG+V Q + + A +A+ P A A LGV+ + G++
Sbjct: 275 IEMKPDNAEAHRMLGLVLHAQRRYEEAVAACRRAVELAPNAAPANGTLGVVLLEQGNVHE 334
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWD 177
AI + ++IDP L A+ + + +L E HR +G+R R+ + +
Sbjct: 335 AIGRLRRAVEIDPTDSVTHSAMLFALVHDDAVDPAQLLEEHRVFGRRHEARVTVKPHA-- 392
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYH--DYQNYKVVVYSAVVKADAKTIRFR 235
N++DP R L +G +S D H+V+ +++ P++ H D + +Y + D T + R
Sbjct: 393 NSRDPARQLKVGIISGDLLAHAVAAYLQ-PVIDHLADDPTLSLHIYYNYLVEDQITAQLR 451
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
EKV W ++ + + + +R D+IDI+++L+GHT N+L +A +PAP+Q +WI
Sbjct: 452 EKVPA----WDNVTNVSDADLIEKIRRDRIDIMIDLSGHTGRNRLVALAHKPAPIQASWI 507
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKH-VEELIRLPECFLCYTPSPEAGPVCPTPALT 354
GYP TTGL IDY ++DS+ PP H +E+++R+ Y P P PV PAL
Sbjct: 508 GYPATTGLKAIDYYLSDSVITPPGEMDDHFIEKIVRM-PALAPYLPPPHCPPVNGLPALR 566
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
NG++T+GSFN L K+ V+ +W+++L A P++R+V+ D R + G+
Sbjct: 567 NGYVTYGSFNRLNKLRQNVIALWSQVLLATPSARMVIGSIEQEGD--RETIIEWFVSEGI 624
Query: 415 ESLRVDL-----LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
++ R+ +P+ L H H +D+ LD FPYAG+TTT +L+MGVP VT++G
Sbjct: 625 DAHRLTFQPRAAMPVYLQQHHH------VDVCLDAFPYAGSTTTLNALWMGVPTVTLSGK 678
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
S L+ VGL IA ++ +V+ ++ A D+ AL LR+ +R+ S
Sbjct: 679 SIPSRGSASWLSHVGLAEYIAHDQKSFVRTSIAAAQDLDALNRLRLGMRERCLASAPFQP 738
Query: 530 QNFALGLESTYRNMWHRYCKGDVPSLKRMEM 560
A GL + R MW R+C+G P+ +E+
Sbjct: 739 NTVARGLSAALRMMWKRWCEGLSPAAFEVEL 769
>gi|83721418|ref|YP_443704.1| TPR domain-containing protein [Burkholderia thailandensis E264]
gi|83655243|gb|ABC39306.1| TPR domain protein [Burkholderia thailandensis E264]
Length = 781
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 273/511 (53%), Gaps = 25/511 (4%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
+ +KP+ +++ LG+V Q + + A +A+ P A A LGV+ + G++
Sbjct: 275 IEMKPDNAEAHRMLGLVLHAQRRYEEAVAACRRAVELAPNAAPANGTLGVVLLEQGNVHE 334
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWD 177
AI + ++IDP L A+ + + +L E HR +G+R R+ + +
Sbjct: 335 AIGRLRRAVEIDPTDSVTHSAMLFALVHDDAVDPAQLLEEHRVFGRRHEARVTVKPHA-- 392
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYH--DYQNYKVVVYSAVVKADAKTIRFR 235
N++DP R L +G +S D H+V+ +++ P++ H D + +Y + D T + R
Sbjct: 393 NSRDPARQLKVGIISGDLLAHAVAAYLQ-PVIDHLADDPTLSLHIYYNYLVEDQITAQLR 451
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
EKV W ++ + + + +R D+IDI+++L+GHT N+L +A +PAP+Q +WI
Sbjct: 452 EKVPA----WDNVTNVSDADLIEKIRRDRIDIMIDLSGHTGRNRLVALAHKPAPIQASWI 507
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKH-VEELIRLPECFLCYTPSPEAGPVCPTPALT 354
GYP TTGL IDY ++DS+ PP H +E+++R+ Y P P PV PAL
Sbjct: 508 GYPATTGLKAIDYYLSDSVITPPGEMDDHFIEKIVRM-PALAPYLPPPHCPPVNGLPALR 566
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
NG++T+GSFN L K+ V+ +W+++L A P++R+V+ D R + G+
Sbjct: 567 NGYVTYGSFNRLNKLRQNVIALWSQVLLATPSARMVIGSIEQEGD--RETIIEWFVSEGI 624
Query: 415 ESLRVDL-----LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
++ R+ +P+ L H H +D+ LD FPYAG+TTT +L+MGVP VT++G
Sbjct: 625 DAHRLTFQPRAAMPVYLQQHHH------VDVCLDAFPYAGSTTTLNALWMGVPTVTLSGK 678
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
S L+ VGL IA ++ +V+ ++ A D+ AL LR+ +R+ S
Sbjct: 679 SIPSRGSASWLSHVGLAEYIAHDQKSFVRTSIAAAQDLDALNRLRLGMRERCLASAPFQP 738
Query: 530 QNFALGLESTYRNMWHRYCKGDVPSLKRMEM 560
A GL + R MW R+C+G P+ +E+
Sbjct: 739 NTVARGLSAALRMMWKRWCEGLSPAAFEVEL 769
>gi|94971753|ref|YP_593801.1| hypothetical protein Acid345_4728 [Candidatus Koribacter versatilis
Ellin345]
gi|94553803|gb|ABF43727.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
Length = 718
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 279/557 (50%), Gaps = 24/557 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG AY + A Y A P EA NNLGV+ ++ A+E ++ A+++
Sbjct: 169 YNLGNAYQRRGNWTQARESYRRAVASRPEFPEAQNNLGVVLREMGETSAAIEAFERAIAL 228
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+ ++ LNNLGV QG+M AA E +AIA P EA+ NLG ++ AI
Sbjct: 229 RAEYADPLNNLGVALQEQGRMSAAVEHYHQAIALRPADVEAHFNLGSALQELHRTDEAIA 288
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEG----HDDKLFEAHRDWGKRFM----RLYSQY 173
AY+ L+I P A N LL Y + G ++ F W + + R ++
Sbjct: 289 AYQSALEIQPGYLPAYSNLLLL--YASTGCVSPAEELAFAL--GWERAALTEEERAEARS 344
Query: 174 TSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
+ T R L IG VS + H+V+ F+E L D ++++++ ++ A+T R
Sbjct: 345 RRFVRTHLAGRKLRIGIVSAELGEHAVADFLEPLLSEIDRSQFELLLFPTRLRDGARTQR 404
Query: 234 FR---EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
+KV+ + + + A ++R++ +D+L++ TGHT +LG+ A + APV
Sbjct: 405 LHALGDKVIS-------LAQVPDAAAAEVIRKEGVDVLIDTTGHTRGCRLGIFAHRAAPV 457
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT 350
Q+TWIGY +TTGL +D+ + D P E + R+P L Y T
Sbjct: 458 QMTWIGYWSTTGLTEVDWVLADDKL-PASFDAHFCEGIWRVPRLPLVYRGDTALPQSAWT 516
Query: 351 PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLE 410
P+ +G + FGS N +KI + L +WA+++ AVP S+L+++ + R + L
Sbjct: 517 PS-ADGTLWFGSLNRYSKIGQESLDLWAKVMEAVPKSKLLLEDRTADDTDAHQRISAELA 575
Query: 411 QLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSV 470
G+ + R++ P I + HM+ Y +D++LDT P TT C++L+MGVP V M G+
Sbjct: 576 THGIGADRIEFEPYIPGHERHMRLYDRVDVALDTIPLNSGTTACDALWMGVPLVAMEGNR 635
Query: 471 HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQ 530
A + L +G IA +E Y+ ++L+++V LR S R M +S +CD +
Sbjct: 636 TASRIAAGFLRAIGRTEWIADSEQNYISKVVELSNNVELRKQLRGSQRQRMVESSLCDAR 695
Query: 531 NFALGLESTYRNMWHRY 547
A LE T+ M+ R+
Sbjct: 696 GLARELEQTFVQMFDRW 712
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 75/129 (58%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+ + + AI YE PH AEA NNLG + + +L++A+ YQ AL
Sbjct: 100 LSNLGITLQSQGRQEDAIACYEKVIALRPHHAEAHNNLGNLRLAQGDLEQAIASYQRALD 159
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KP+++ + NLG Y +G A E +A+A+ P + EA NNLGV+ R+ G S AI
Sbjct: 160 LKPDYADAHYNLGNAYQRRGNWTQARESYRRAVASRPEFPEAQNNLGVVLREMGETSAAI 219
Query: 121 DAYEQCLKI 129
+A+E+ + +
Sbjct: 220 EAFERAIAL 228
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 10 EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL 69
E + A YE +P+ EA ++L ++ A + LS++P +L
Sbjct: 41 EAGRLQPAAKIYEQVLRGDPNNVEALHSLSILASQIGETATAERLMRQVLSLQPEHVGAL 100
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+NLG+ QG+ + A EK IA P +AEA+NNLG L G + AI +Y++ L +
Sbjct: 101 SNLGITLQSQGRQEDAIACYEKVIALRPHHAEAHNNLGNLRLAQGDLEQAIASYQRALDL 160
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
PD +A N L Y G+ + E++R
Sbjct: 161 KPDYADAHYN--LGNAYQRRGNWTQARESYR 189
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 75/149 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+++L + ++ + A P A +NLG+ + + + A+ CY+ ++
Sbjct: 66 LHSLSILASQIGETATAERLMRQVLSLQPEHVGALSNLGITLQSQGRQEDAIACYEKVIA 125
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P+ +++ NNLG + QG ++ A ++A+ P YA+A+ NLG Y+ G+ + A
Sbjct: 126 LRPHHAEAHNNLGNLRLAQGDLEQAIASYQRALDLKPDYADAHYNLGNAYQRRGNWTQAR 185
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
++Y + + P+ A N + + + E
Sbjct: 186 ESYRRAVASRPEFPEAQNNLGVVLREMGE 214
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
+ + L A + Y+ L PN ++L++L ++ + G+ A ++ + ++ P +
Sbjct: 39 HHEAGRLQPAAKIYEQVLRGDPNNVEALHSLSILASQIGETATAERLMRQVLSLQPEHVG 98
Query: 102 AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A +NLG+ + G AI YE+ + + P A N
Sbjct: 99 ALSNLGITLQSQGRQEDAIACYEKVIALRPHHAEAHNN 136
>gi|167589231|ref|ZP_02381619.1| TPR repeat protein [Burkholderia ubonensis Bu]
Length = 693
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 168/554 (30%), Positives = 267/554 (48%), Gaps = 10/554 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + +F A+ A +P A+A N LG Y + + + ++ A+ + P
Sbjct: 143 LGELRSQQGEFGQAVQLCRRAIELDPELADAYNFLGFAYHNLNMFAASELSHRHAVDLNP 202
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ + + +NL V K+D A + E A LG + G ++ A+DA+
Sbjct: 203 DDADAHHNLAAVLFRLDKLDEATKHYEIARELGIDPLRIQMTLGDILWAKGDLAGAMDAF 262
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE 183
++ D A + M ++ R +G+ R + + +
Sbjct: 263 RAAIRYD--LHRAYSRMMFNMTTSPAFTPEQWVAEARSYGEHLARDAKPFEHDRGQRVAQ 320
Query: 184 ---RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
RPL +G+VS D H V F+E+ L D + Y V D T R +
Sbjct: 321 AQGRPLRVGFVSGDLRQHPVGIFLESVLARIDRSRIEPHAYVTFVAEDDVTARLKPSFAS 380
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W+ + G+ ++ A ++R+D IDIL+++ GHT + L + A +PAPVQ +W+G+ T
Sbjct: 381 ----WKKVTGLAREQAAEVIRDDGIDILIDMAGHTNWSGLPIFAHKPAPVQASWLGFFAT 436
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TG IDY I D+ P + + VE+ RLP+ +LC+TP P V P + NG +TF
Sbjct: 437 TGCRAIDYFIGDAHTLPADEEHHFVEKPWRLPDSWLCFTPPPYDVAVGALPMVANGGVTF 496
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G F L+KI+ V+ +W+RIL A+P++RL++K L + G+ + R+
Sbjct: 497 GCFGKLSKISDAVVALWSRILHALPDARLLLKAHELGSGDQNQTTLDRFARHGIGADRL- 555
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+L ++ AY+ +DI+L FPY G TT+ E+L+MGVP + M GS ++ SLL
Sbjct: 556 ILEGGSPRAEYFGAYNRIDIALSPFPYPGGTTSAEALWMGVPVIGMKGSRFVTHICESLL 615
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
G+ IA +E Y+ A+ A D LA LR +LR+ SP+CD FA LE
Sbjct: 616 HAAGMAEWIADDEAAYLAKAVAFARDRDRLATLRATLRERTLASPLCDAARFARNLEDAL 675
Query: 541 RNMWHRYCKGDVPS 554
MW Y KGD +
Sbjct: 676 HGMWDVYAKGDASA 689
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 32/166 (19%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A ++ + + A Y A +P A+A NNLG + ++ D A + Y+ A++++
Sbjct: 8 NLGNALHDLGEHEAAAASYGKAVAHDPQYAQAYNNLGNALRAQEKHDAAADAYRHAIALQ 67
Query: 63 PNFSQSLNNLGVVYTVQGK--------------MDA------------------AAEMIE 90
P F + L G DA AAE+ E
Sbjct: 68 PGFRVAHQGLSAALLAAGDPLGAIEHALEGLEPADADAHCVLARLQQRISDFGKAAELFE 127
Query: 91 KAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
+AIA +P +A A+ LG L G A+ + +++DP+ +A
Sbjct: 128 QAIAIDPEHARAWAWLGELRSQQGEFGQAVQLCRRAIELDPELADA 173
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
++Q+ NNLG G+ +AAA KA+A +P YA+AYNNLG R A DAY
Sbjct: 1 GYAQAYNNLGNALHDLGEHEAAAASYGKAVAHDPQYAQAYNNLGNALRAQEKHDAAADAY 60
Query: 124 EQCLKIDPDSRNAGQN 139
+ + P R A Q
Sbjct: 61 RHAIALQPGFRVAHQG 76
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P A+A L + + + KA E ++ A++I P +++ LG + + QG+ A
Sbjct: 98 LEPADADAHCVLARLQQRISDFGKAAELFEQAIAIDPEHARAWAWLGELRSQQGEFGQAV 157
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR---LLA 143
++ +AI +P A+AYN LG Y + + + ++ + ++PD +A N L
Sbjct: 158 QLCRRAIELDPELADAYNFLGFAYHNLNMFAASELSHRHAVDLNPDDADAHHNLAAVLFR 217
Query: 144 MNYINEGHDDKLFEAHRDWGKRFMRL 169
++ ++E K +E R+ G +R+
Sbjct: 218 LDKLDEA--TKHYEIARELGIDPLRI 241
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A+A NNLG D + A Y A++ P ++Q+ NNLG Q K DAAA+
Sbjct: 3 AQAYNNLGNALHDLGEHEAAAASYGKAVAHDPQYAQAYNNLGNALRAQEKHDAAADAYRH 62
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAID-AYEQCLKIDPDS 133
AIA P + A+ L AG AI+ A E D D+
Sbjct: 63 AIALQPGFRVAHQGLSAALLAAGDPLGAIEHALEGLEPADADA 105
>gi|221202121|ref|ZP_03575156.1| TPR repeat protein [Burkholderia multivorans CGD2M]
gi|221209071|ref|ZP_03582066.1| TPR repeat protein [Burkholderia multivorans CGD2]
gi|221171066|gb|EEE03518.1| TPR repeat protein [Burkholderia multivorans CGD2]
gi|221177915|gb|EEE10327.1| TPR repeat protein [Burkholderia multivorans CGD2M]
Length = 779
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 264/510 (51%), Gaps = 13/510 (2%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
+ L +A + + L ++P+ +++L +V + D A +A+ P A
Sbjct: 257 NRLAEAEDVCRRLLELRPDHAEALRIHALVLFALRRADEAIATCRRAVELAPNAAAPNGT 316
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165
LG L + G A+ + ++IDP + L + + ++ L HR +G+R
Sbjct: 317 LGFLLLELGVTQEALGWLRRAIEIDPTDSVTHSSMLFCLAHSSDLDPQALVAEHRKFGQR 376
Query: 166 FM-RLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVV--YS 222
+ R + ++ N+++P R L +G+VS D F H+V+ + P++ H + + + Y
Sbjct: 377 YEDRKRKRAAAFSNSREPARRLRVGFVSGDLFNHAVASY-AVPVIEHLAADTGIAMHFYH 435
Query: 223 AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGM 282
V+ D + RF K G WR++ G+ + VR D+IDI+++L+GHT N+L
Sbjct: 436 NHVEEDQTSERF--KACAAG--WRNVAGMSDHAFLERVRSDRIDIMIDLSGHTGRNRLVA 491
Query: 283 MACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET-KQKHVEELIRLPECFLCYTPS 341
+A + APVQ +WIGYP TTGL +IDY +TD P + VE+++RLP + P
Sbjct: 492 LAQRAAPVQASWIGYPATTGLASIDYYLTDRFVAPHGLFDDQFVEQIVRLP-AIAPFMPP 550
Query: 342 PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
P PV PAL NG+ T+GSFN L K++P+V+ VWAR+L A P +R+ + D
Sbjct: 551 PHCPPVNALPALHNGYTTYGSFNRLNKLSPQVIAVWARVLHADPTARMALGAIGNAGD-- 608
Query: 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
+ G+++ R+ P + +MQ + +D+ LD FPY G+TTT +L+MGV
Sbjct: 609 QRTLTEWFAAAGIDASRLTFHPRSNIP-VYMQQHHGVDLCLDAFPYTGSTTTLNALWMGV 667
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P VT+ GS A L V L IAK+ED++V A+ L D AL LR LR
Sbjct: 668 PTVTIPGSTVAGRGSAGWLQHVRLDEYIAKDEDDFVAKAVALGRDTAALHVLRTGLRARC 727
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
++S A GL S R MW R+C G+
Sbjct: 728 AQSAAFRPAVVAAGLSSALRTMWRRWCAGE 757
>gi|254246744|ref|ZP_04940065.1| TPR repeat [Burkholderia cenocepacia PC184]
gi|124871520|gb|EAY63236.1| TPR repeat [Burkholderia cenocepacia PC184]
Length = 781
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 264/515 (51%), Gaps = 27/515 (5%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
D+A E + L ++P+ ++ L G V + A +A+ P A + L
Sbjct: 262 RFDEADEQCRRLLQLQPDHTEGLRIHGQVLLALRRTTEANAACRRAVELAPGGAAVNSTL 321
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166
G + + G+ A+ + ++DP A N L + + + L + HR +G+R+
Sbjct: 322 GFILLEQGATQEALGWLRRAFELDPTDSVAHSNMLFCLTHSADSDPQSLADQHRAFGQRY 381
Query: 167 --MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--S 222
+L + +T NT+DP R L +G+VS D F H+V+ + P++ + + +Y
Sbjct: 382 GNHKLAAAFT---NTRDPARQLRVGFVSGDLFNHAVASY-AVPVIERLATDSGIAMYFYH 437
Query: 223 AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGM 282
+ D + RF+ W ++ G++++ VR D+IDI+++L+GHT N+L
Sbjct: 438 NHLAEDHVSERFKACATS----WCNVTGLNDQAFLERVRNDRIDIVIDLSGHTGRNRLVA 493
Query: 283 MACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH-VEELIRLPECFLCYTPS 341
+A + APVQ +WIGYP TTGL +DY I D P H VE ++RLP + P
Sbjct: 494 LAQRAAPVQASWIGYPATTGLAAMDYFIADRFVAPHGEFDDHFVEHIVRLP-AIASFMPP 552
Query: 342 PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
P PV PAL+NG+ T+GSFN L K++P+V+ VWAR+L +R+V+ +
Sbjct: 553 PNCPPVNVLPALSNGYTTYGSFNRLNKLSPQVVAVWARVLHGAQTARMVLGA--IGGEED 610
Query: 402 RHRFLSTLEQLGLESLRVDL-----LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
R G+++ R+ +P+ +MQ + +D+ LDTFPY G+TTT +
Sbjct: 611 RQTLTEWFSAAGIDAGRLSFHRRSSIPV------YMQQHHGVDLCLDTFPYTGSTTTLNA 664
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMS 516
L+MG P +T++G+ A + L VGL IAKNEDE+V AL L D +L LR
Sbjct: 665 LWMGTPTLTLSGATMAGRGSSTWLQHVGLDAYIAKNEDEFVAKALALGKDTASLQALRSG 724
Query: 517 LRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
LR ++S + A GL S R MW R+C G+
Sbjct: 725 LRARCAESAAFRPEIVAAGLSSALRTMWTRWCAGE 759
>gi|391227600|ref|ZP_10263807.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Opitutaceae bacterium TAV1]
gi|391223093|gb|EIQ01513.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Opitutaceae bacterium TAV1]
Length = 596
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 258/520 (49%), Gaps = 14/520 (2%)
Query: 27 FNPHCAEACNN-----LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81
+ AEA ++ LG I L ++ Y AL+ L L V G+
Sbjct: 68 LSSRAAEAADSRPFELLGDIAYLSGRLAESEAAYGKALTFNLGQPMVLTKLATTLRVMGR 127
Query: 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRL 141
+ AA +A P + AY LG ++R G I ++ A E ++DP +
Sbjct: 128 LGEAATAAREAANRFPEHVPAYGVLGAVHRARGEIEESLAALEIARELDPRQPAYTSAWI 187
Query: 142 LAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE---RPLVIGYVSPDYFTH 198
+ Y+ D ++ A R+W +R R S + P R L +GY+SPD+ H
Sbjct: 188 VTHAYLPHAGDAEMLAAGREW-ERAHRQLSPGSPPPLASVPAAEGRRLRVGYLSPDFRRH 246
Query: 199 SVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
SV++F L HD Y V D T +V G WR + G+ + ++A+
Sbjct: 247 SVAWFFLPLLENHDRSRVDTFCYYLVPNFDDVT----RRVAAAAGHWRLVAGMRDAEIAS 302
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP- 317
++R D+ID+LV+L GH + G+ +PAPVQV G+ TTG+ +D R++D+ DP
Sbjct: 303 LIRRDRIDVLVDLAGHFGECRPGVFYHRPAPVQVHHAGFCATTGMSVLDARLSDATVDPV 362
Query: 318 PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
+ E +I L CY+P PV P PAL NGF+TFGSFNN KI VL W
Sbjct: 363 AGHRPDSAERIIHLASGMHCYSPLDPLPPVAPAPALKNGFVTFGSFNNFPKINKNVLDAW 422
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
A+IL P+SRLV+K + +R + + G+ + R+DL+P + H+ AY
Sbjct: 423 AQILARTPHSRLVIKSQGMTDAYLREKITTLFAMRGVAAERLDLMPFATKHASHLAAYDG 482
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
+DI LD FPY G TTTC++L+ GVP +T+ G+ H +G S+L + G +A + +YV
Sbjct: 483 IDIHLDAFPYNGVTTTCDALWAGVPVLTVRGACHRGRIGESILRRAGEASAVADDTGDYV 542
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+ A+ A DV LA R R ++ SPV DG A +E
Sbjct: 543 RRAIAWAGDVRRLAAERGERRARVAASPVGDGAAHARSME 582
>gi|334128131|ref|ZP_08502030.1| TPR domain/SEC-C domain protein [Centipeda periodontii DSM 2778]
gi|333388255|gb|EGK59437.1| TPR domain/SEC-C domain protein [Centipeda periodontii DSM 2778]
Length = 587
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 222/384 (57%), Gaps = 18/384 (4%)
Query: 173 YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTI 232
YT + + P + L +GY+SPD+ HSV+YF+ L + D + + V Y A ++DA T
Sbjct: 208 YTHDNALRAPHKKLRLGYISPDFREHSVAYFLIPLLRHFDGEQFMVFCY-ATGRSDAVT- 265
Query: 233 RFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
++ + WRD+ G + A ++ EDKIDILV+L+GH+ +N L +MA +PAPVQV
Sbjct: 266 ---GRLRTRRLTWRDLRGRSPRAAARLIAEDKIDILVDLSGHSQDNALPIMAYRPAPVQV 322
Query: 293 TWIGYPNTTGLPTIDYRITDSLADPP---ETKQKHVEELIRLPECFLCYTPS-----PEA 344
+ IGY NTTGL IDY ++D + P + E ++RLP LCY P P+A
Sbjct: 323 SGIGYTNTTGLHVIDYFLSDEICVPKGDLHAEAGFTERVLRLPHSHLCYVPEAIRTMPDA 382
Query: 345 GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR 404
G P NG++TFGSFNN AK+T ++L +W IL +V S+L++K K DS +
Sbjct: 383 G--YEPPVRRNGYVTFGSFNNFAKVTDEILLLWRGILESVRGSKLIIKGKIGSIDSGINF 440
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
L L + RV+ P + D+++ Y +DI+LDT PY G TTCE+LYMGVP +
Sbjct: 441 AKKRLSMLSYDLERVEFRPY---SPDYLEQYRDIDIALDTAPYNGGLTTCEALYMGVPVI 497
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
++ G H G S+LT G++ LIA+N+ YV+ A++LA L M LR M +S
Sbjct: 498 SLRGRTHGSRFGASILTNAGVRELIAENDINYVRRAVKLAQTPKLLEAYHMGLRANMKRS 557
Query: 525 PVCDGQNFALGLESTYRNMWHRYC 548
P+ D Q + LE+ Y +W +C
Sbjct: 558 PLMDAQGYMEELETAYHEIWENFC 581
>gi|171320227|ref|ZP_02909285.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
MEX-5]
gi|171094516|gb|EDT39572.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
MEX-5]
Length = 754
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 174/577 (30%), Positives = 280/577 (48%), Gaps = 44/577 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVEC------- 54
+N G + D AI Y P A + LG + +RD+L+ A+E
Sbjct: 178 FNQGNVLRAQGRPDEAIACYRHTIALQPDLHAAHHALGALLFERDDLEAAIESLTRAAES 237
Query: 55 ------YQMALSIK-------------------PNFSQSLNNLGVVYTVQGKMDAAAEMI 89
+ +A +++ P+ + ++L QGK A +
Sbjct: 238 GEADCLFHLAAALERAGDLDGTVASLRRALAAAPDRADLHHHLAQTLVRQGKRREALDSC 297
Query: 90 EKAIA-ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
A++ NPT A+ + +G + + + +Y++ L++DP RNA R+ +
Sbjct: 298 RIALSLPNPT-AQMHAVMGDILCAMWHLDAGLASYDRALEVDPAFRNAHSGRMFHAAGTD 356
Query: 149 EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE--RPLVIGYVSPDYFTHSVSYFIEA 206
+L + R++G R + +Q + + P R L +G+VS D +H V+ F+ +
Sbjct: 357 RLSAAQLLDRAREFGAR---MAAQASPRTHVPRPAAGRVLRVGFVSGDLKSHPVAVFLLS 413
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
+ D + V Y+ D T + +WRDI +D++ A ++ D+ID
Sbjct: 414 VVAALDPARVEAVAYATQSVEDDTTAALKHHF----ALWRDITALDDRAAADLIANDRID 469
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
+LV+L+GHTA+N+L + A +PAPVQ TW+GY TTG+ IDY I D P + VE
Sbjct: 470 VLVDLSGHTASNRLPLFAWKPAPVQATWLGYFATTGIAAIDYVIGDRHVLPDDEAHHFVE 529
Query: 327 ELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
RLP+ +LC+TP + V P PA G +TFG NN KI V+ +W+R+L AVP
Sbjct: 530 RPWRLPDSYLCFTPPAQPLDVGPLPAGREGVVTFGCLNNANKIGDAVVALWSRVLHAVPG 589
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
SRL++K ++R + G+ R+ LL H+ Y+ +DI LD FP
Sbjct: 590 SRLLLKSAQLDEAALRTSLAARFAAHGIPVERL-LLRGGSKRLAHIATYNDIDIVLDPFP 648
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
Y G TT+ E L+MG P +T G ++G S+L +G+ IA N+D+YV A A
Sbjct: 649 YPGGTTSMEGLWMGAPFITRRGDRFLSHIGESILHTLGMPEWIADNDDDYVAKAAAFAQG 708
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
+ +A +R LR+ + +SP+CD FA LE+ + M
Sbjct: 709 LPHVAAVRAGLRERLLRSPLCDAPRFARHLEAAFAQM 745
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 69/132 (52%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG + D AI Y A P AEA +NLG +D + D A+ AL+
Sbjct: 75 LNNLGNMLRAHGRLDDAIGAYRRAIALAPDYAEAHSNLGNALRDAGDADAAMLSCAQALA 134
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P+++ + NNLG +G++DAAA EKAIA +P YA+A N G + R G AI
Sbjct: 135 LRPDYAPAFNNLGNALQDKGELDAAARAYEKAIALDPGYAQARFNQGNVLRAQGRPDEAI 194
Query: 121 DAYEQCLKIDPD 132
Y + + PD
Sbjct: 195 ACYRHTIALQPD 206
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N + + +FD A V YE P +A + LG++ + + A++++
Sbjct: 10 NAAFVHHQAGRFDDARVLYEAIRRDEPEQPDATHFLGLLACQLGQFPAGLALMERAIALR 69
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ LNNLG + G++D A +AIA P YAEA++NLG RDAG A+ +
Sbjct: 70 AD-PVYLNNLGNMLRAHGRLDDAIGAYRRAIALAPDYAEAHSNLGNALRDAGDADAAMLS 128
Query: 123 YEQCLKIDPD 132
Q L + PD
Sbjct: 129 CAQALALRPD 138
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + D A++ A P A A NNLG +D+ LD A Y+ A+++
Sbjct: 111 NLGNALRDAGDADAAMLSCAQALALRPDYAPAFNNLGNALQDKGELDAAARAYEKAIALD 170
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++Q+ N G V QG+ D A IA P A++ LG L + + AI++
Sbjct: 171 PGYAQARFNQGNVLRAQGRPDEAIACYRHTIALQPDLHAAHHALGALLFERDDLEAAIES 230
Query: 123 YEQC 126
+
Sbjct: 231 LTRA 234
>gi|456355835|dbj|BAM90280.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Agromonas oligotrophica S58]
Length = 742
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 168/548 (30%), Positives = 276/548 (50%), Gaps = 7/548 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ + + FD A+ A NP+ A G +Y+++ +A + AL+
Sbjct: 196 LFGKAIVSMNLRNFDAALAALNAALAINPNAAAMIAQRGRVYQEQARFAEAEAEFDAALA 255
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P +L V V G + A I K +A NP A+ LGV G I+ AI
Sbjct: 256 LEPLLEDALRGKATVALVSGNIALANSFINKMLAQNPNSESAWTLLGVCSAMQGDIATAI 315
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
Y++ L I PD +A ++ A++++ + ++L R W + + +
Sbjct: 316 AHYDRALAIKPDHEDAITKKIFALDFLPDVDVERLQSERRYWWEAIGSRLPRLALGERDL 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+R LV+GYVS D+ HS ++ L +HD+ ++++ YS DAKT R V +
Sbjct: 376 DPDRRLVVGYVSSDFRDHSAAFAFIPILRHHDHAKFEIIAYSCSPVRDAKTDLCRSLVDR 435
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W D + + ++A +R DKIDILV+L+GH+A ++L + A +PAP+QV+ +G
Sbjct: 436 ----WVDASRLGDDQLADQIRADKIDILVDLSGHSAGHRLTLFARKPAPIQVSAVGSVTG 491
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP +DY + D + P + E++ LP L P P P P L N +TF
Sbjct: 492 TGLPVMDYLLADPVVIPAAVRDLFAEKIYDLPS--LITIEPPPVIPASPLPMLRNDHVTF 549
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G FN + KI+ L++W++++ A P S +VVK +R ++ G+ + RV
Sbjct: 550 GVFNRIDKISEPCLRLWSKLMAATPGSIIVVKNHSMSDALLRDGLIARFVAQGIAADRVR 609
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ +H+ ++ +DI+LD FP G +T E+L MGVP VT GS A G +++
Sbjct: 610 CVGKT-GRAEHLSMFADIDIALDPFPQNGGISTWEALQMGVPVVTKLGSGPAARAGGAIV 668
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VGL +A+N++ Y+ +AL+ S LA LR +L ++ S +G + +E Y
Sbjct: 669 KAVGLDEWVAENDEGYLAIALKFCSRPAELAALRAALPAMVLNSAAGNGALYTQHVEKAY 728
Query: 541 RNMWHRYC 548
R WH YC
Sbjct: 729 RTFWHDYC 736
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV+ + +D A + A +P AEA +NLG+ ++A Y+ A++
Sbjct: 60 LHLLGVSERDCGHYDQAALVLTRAAEVDPRSAEAQSNLGLSLLRLGRHEEARARYERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PNF +L NLG T + + A ++AIA P Y +AY N G+ A
Sbjct: 120 LQPNFPTALTNLGNTLTSLFRFEEAISAHDRAIALKPDYGDAYANRGMALLLTSRNEEAG 179
Query: 121 DAYEQCLKIDP 131
++++ L + P
Sbjct: 180 QSFDRALSLQP 190
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV 78
+ +L HF A + LGV +D + D+A A + P +++ +NLG+
Sbjct: 49 ILQDLPDHFG-----ALHLLGVSERDCGHYDQAALVLTRAAEVDPRSAEAQSNLGLSLLR 103
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
G+ + A E+AIA P + A NLG AI A+++ + + PD +A
Sbjct: 104 LGRHEEARARYERAIALQPNFPTALTNLGNTLTSLFRFEEAISAHDRAIALKPDYGDAYA 163
Query: 139 NRLLAM 144
NR +A+
Sbjct: 164 NRGMAL 169
>gi|421866704|ref|ZP_16298367.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderia cenocepacia H111]
gi|358073189|emb|CCE49245.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderia cenocepacia H111]
Length = 782
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 260/510 (50%), Gaps = 28/510 (5%)
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
+C ++ + P + L G+V + D A +A+ P A + + LG + +
Sbjct: 268 QCRRL-FEVHPEHPEGLRIHGLVLFALRRTDEAIATCRRAVELAPNSAASNSTLGFVLLE 326
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ 172
G+ A+ + L+IDP + L + + ++ LF+ HR +F RL+
Sbjct: 327 QGATQEALGWLRRALEIDPTDSVTHSSMLFCLVHGSDVSPQMLFDEHR----KFGRLHEN 382
Query: 173 YTS-----WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA 227
+ + N ++P R L IG+VS D F H+V+ + P++ H + + ++
Sbjct: 383 HKRKRPPVFSNARNPTRQLQIGFVSGDLFNHAVASY-ALPVIEHLAADTSIAMHFYHNHV 441
Query: 228 DAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQP 287
D I R K K WR+I G++++ VR D+IDIL++L+GHT N+L +A +
Sbjct: 442 DEDHISQRFKACAKN--WRNIAGMNDRAFLERVRNDRIDILIDLSGHTGRNRLVALAQRA 499
Query: 288 APVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH-VEELIRLPECFLCYTPSPEAGP 346
APVQ +WIGYP TTG+ IDY +TD P H +E+++RLP + P P P
Sbjct: 500 APVQASWIGYPVTTGIAAIDYYLTDRFVAPHGQFDDHFIEQIVRLPAS-APFMPPPHCPP 558
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFL 406
V PAL NG+ T+GSFN L K++ V+ VWA +L A P +R+ + D +H
Sbjct: 559 VNVLPALRNGYTTYGSFNRLNKLSRHVISVWANVLHANPTARMALGA--IGNDGDQHTLT 616
Query: 407 STLEQLGLESLRVDL-----LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
G++ R+ +P+ +MQ + +D+ LDTFPY G+TTT +L+MGV
Sbjct: 617 EWFAAAGIDVERLSFHRRSNIPV------YMQQHHGVDLCLDTFPYTGSTTTLNALWMGV 670
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P VT+ G+ A + L VGL + IA NED++V AL L D T++ LR LR
Sbjct: 671 PTVTLPGTTLAGRGSATWLQHVGLDNYIATNEDDFVAKALALGRDTTSMQALRTGLRARC 730
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
++S A GL S R MW R+C G+
Sbjct: 731 AESAAFRPAVVAAGLSSALRTMWTRWCAGE 760
>gi|367471706|ref|ZP_09471311.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 285]
gi|365276025|emb|CCD83779.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 285]
Length = 747
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 270/548 (49%), Gaps = 7/548 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ VA + FD A+ A NP+ G +Y++ ++A + AL+
Sbjct: 196 LFGKAVASTYLRDFDAALAALNTALAINPNAGAVIAQRGRVYQELGKFEQAEADFDAALA 255
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+P +L V G + A + K +A NP A+ LGV G + AI
Sbjct: 256 REPLLEAALCGKATVTLANGHLAQAIAVSNKVLAQNPNSELAWTLLGVCAAAQGDTATAI 315
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+ Y++ L I+P +A ++ A++++ + +L + W Q +
Sbjct: 316 EHYDRALAINPHHEDAITKKIFALDFLPDVTVKRLQAERKYWWDAIGSRLPQRSLGARDL 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+R LV+GYVS D+ HS ++ L +HD+ ++++ YS DAKT R V +
Sbjct: 376 DPDRRLVVGYVSSDFRDHSAAFAFMPILRHHDHAKFEIIAYSCSPMQDAKTELCRALVDR 435
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W D + K+A ++ DK+DILV+L+GH+A ++L + A +PAP+QV+ +G
Sbjct: 436 ----WVDASLWSDDKLADQIQADKVDILVDLSGHSAGHRLTLFARKPAPIQVSAVGSVTG 491
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP +DY + D + P + E + LP L P P P P L NG++TF
Sbjct: 492 TGLPVMDYLLADPVVIPAAVRPLFAERIYDLPS--LITIEPPPPVPPSPLPMLRNGYVTF 549
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G+FN + K++ L +W++++ A P S +VVK +R R ++ G+ + RV
Sbjct: 550 GAFNRIDKLSDPTLSLWSKLMAATPGSIIVVKNHSMGDALMRDRLIARFVAHGIAADRVR 609
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
H+ ++ +DISLD FP G +T ESL MGVP VT GS A G +++
Sbjct: 610 CEGKTT-RQAHLAMFADIDISLDPFPQNGGISTWESLQMGVPVVTKLGSGPAARAGGAIV 668
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VGL +A+++D Y+ +AL+ S LA LR L DL+S S D + +E Y
Sbjct: 669 KAVGLDDWVAEDDDAYLAIALKFCSRPAELAALRARLTDLVSHSAAGDNALYTQQVEQGY 728
Query: 541 RNMWHRYC 548
R W YC
Sbjct: 729 RKFWQDYC 736
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV+ E +FD A++ A +P A+A ++LGV + A ++ A++
Sbjct: 60 LHLLGVSERECGRFDQAVLLLTRAVEIDPRAADAQSDLGVALSRLGRHEDARARFERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPNF +L +LG + + A ++AIA P YAEAY N G+ + A
Sbjct: 120 LKPNFPTALTHLGNALMSLFRFEEAISAHDRAIALKPDYAEAYANRGMTLLFTSRHAEAG 179
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
+++ L + P +A + +A Y+ +
Sbjct: 180 QNFDRALSLQPRLLSALFGKAVASTYLRD 208
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 14/153 (9%)
Query: 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV 78
+ EL HF A + LGV ++ D+AV A+ I P + + ++LGV +
Sbjct: 49 ILQELPQHFG-----ALHLLGVSERECGRFDQAVLLLTRAVEIDPRAADAQSDLGVALSR 103
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
G+ + A E+AIA P + A +LG AI A+++ + + PD A
Sbjct: 104 LGRHEDARARFERAIALKPNFPTALTHLGNALMSLFRFEEAISAHDRAIALKPDYAEAYA 163
Query: 139 NRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS 171
NR + + + + H + G+ F R S
Sbjct: 164 NRGMTLLFTSR---------HAEAGQNFDRALS 187
>gi|365894959|ref|ZP_09433090.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3843]
gi|365424290|emb|CCE05632.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3843]
Length = 740
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 274/552 (49%), Gaps = 9/552 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LG+ + D A+ + A +P A G ++ + + A + AL
Sbjct: 197 FGLGLVGVNLRHCDQALTSFNAALAISPGNAAILAQRGRLHLQMGHFEPAEADFDAALVA 256
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PN +L V + G + A K + N + A LG G ++ AI
Sbjct: 257 DPNLEAALLGKAHVNVLNGNVAPAMAACNKVLEQNASSEVALVWLGACLAKQGDVTGAIQ 316
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA-HRDWGKRFMRLYSQYTSWDNTK 180
+++ L+I PD A ++ A++++ + D L +A R+W +R Q
Sbjct: 317 LFDRALEIKPDFEEAVTKKIFALDFLPDA-DFALQQAVRREWWERIGARIGQRKLDIRYC 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DPERPLV+GYVS D+ HS + L +HD+ ++VV YS D+ T +F+ K
Sbjct: 376 DPERPLVVGYVSSDFRNHSAALAFFPVLRHHDHGAFRVVCYSCSPLRDSVTEKFQSIADK 435
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W D + + + ++A ++ D++DILV+L+GH+ ++L + A +PAP+Q + G+P
Sbjct: 436 ----WVDAWQLSDDELADQIQADQVDILVDLSGHSGGHRLSVFARKPAPIQASAWGHPTG 491
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPT+DY + D ++ P + E++ LP C + + E G P L NG++TF
Sbjct: 492 TGLPTMDYVLADPVSIPSSARHLFAEQIHDLP-CMITMD-AIEGGHATELPMLRNGYVTF 549
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G FN + KI+ L VWA ++ + ++R+V+K +R + G+ + R+
Sbjct: 550 GVFNRIDKISDAALAVWAELMQELTSARIVIKNVALDDAYLRDSLIGRFVDHGIAAERIR 609
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ DH+ ++ +DISLD FP G +T ESL+MGVP +T GS + G +++
Sbjct: 610 CMGSTS-RPDHLAEFAAIDISLDPFPQNGGASTWESLHMGVPVITKLGSTPSARAGGAVI 668
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T +GL +A+++ Y+ +A + +D ALA LR L ++ S + + +E Y
Sbjct: 669 TAIGLDDWVAEDDAGYLAIARRHVADPAALAKLRAELPQRIATSAAGNVALYTRKVEEGY 728
Query: 541 RNMWHRYCKGDV 552
R W RYC +
Sbjct: 729 RTFWRRYCAANA 740
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A + LG+ D LD A + A++++P +++L NLG+VY Q + + A ++ E+A
Sbjct: 59 ALHLLGISALDCGRLDVAEQALTRAVALEPRHAEALVNLGLVYFHQKRYEEARKLQERAT 118
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
AA P +A A+ LG + A++A+++ + + PD +A Y N G
Sbjct: 119 AAKPNFAVAFTTLGNTLMNMRLFDQALEAHQRAIAVKPDYADA---------YCNRGMTQ 169
Query: 154 KLFEAHRDWGKRFMR 168
L + H++ + F R
Sbjct: 170 LLMQRHQEAYESFNR 184
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG++ + + D+A A P AEA NLG++Y + ++A + + A +
Sbjct: 60 LHLLGISALDCGRLDVAEQALTRAVALEPRHAEALVNLGLVYFHQKRYEEARKLQERATA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
KPNF+ + LG D A E ++AIA P YA+AY N G+ A
Sbjct: 120 AKPNFAVAFTTLGNTLMNMRLFDQALEAHQRAIAVKPDYADAYCNRGMTQLLMQRHQEAY 179
Query: 121 DAYEQCLKIDP 131
+++ + L ++P
Sbjct: 180 ESFNRALALNP 190
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+ Y +++ A E A P+ A A LG + D+A+E +Q A++
Sbjct: 94 LVNLGLVYFHQKRYEEARKLQERATAAKPNFAVAFTTLGNTLMNMRLFDQALEAHQRAIA 153
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KP+++ + N G+ + + A E +A+A NP + A LG++ + A+
Sbjct: 154 VKPDYADAYCNRGMTQLLMQRHQEAYESFNRALALNPRHMHATFGLGLVGVNLRHCDQAL 213
Query: 121 DAYEQCLKIDP 131
++ L I P
Sbjct: 214 TSFNAALAISP 224
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
Y+ + D C Q+ L + P++ +L+ LG+ G++D A + + +A+A P +AE
Sbjct: 34 YRAGRHADTQAICRQI-LELLPDYFPALHLLGISALDCGRLDVAEQALTRAVALEPRHAE 92
Query: 102 AYNNLGVLY 110
A NLG++Y
Sbjct: 93 ALVNLGLVY 101
>gi|295678098|ref|YP_003606622.1| hypothetical protein BC1002_3066 [Burkholderia sp. CCGE1002]
gi|295437941|gb|ADG17111.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. CCGE1002]
Length = 1634
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 267/508 (52%), Gaps = 28/508 (5%)
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
AL+ PN+++ L T + + +A A P +A+ + LG G
Sbjct: 235 ALARFPNYAELHRMLANSLTGMHRYTDSIASCRRAAALAPGHADIHGTLGTALLGHGQNE 294
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH-RDWGKRF-MRLYSQYTS 175
A AY + L++ P +A L + + + D +F+A R++ KR L ++
Sbjct: 295 EAETAYRRALELTPMDASAYTALLHCLMHKVD-RDMAMFQAEAREFAKRHEASLRERWPR 353
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ--NYKVVVYSAVVKADAKTIR 233
+N +DP R L IG+VS D H V+ F+ P V H + N + YS +D+ T +
Sbjct: 354 HENARDPSRRLRIGFVSGDLVNHPVTSFL-LPTVEHLARDNNLSLHFYSNNPASDSVTAQ 412
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
R + WR++YG + +A +R D IDIL++L GH+ N+L A +PAPVQV+
Sbjct: 413 IR----RHADGWREVYGFADGALAQQIRADGIDILIDLAGHSGRNRLAAFAHKPAPVQVS 468
Query: 294 WIGYPNTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPSPE-AGPVCPTP 351
WIG P TTGL +IDY ++D P + K E+L+ LP L +PE + PV P
Sbjct: 469 WIGNPATTGLTSIDYYLSDRFVTPLDQFAGKFSEKLVFLPA--LAPFRAPENSPPVNELP 526
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC--CDSVRHRFLSTL 409
AL NGF+TFGSF+ ++KI P V+ +WAR+L VP++RLV+ D + RF +
Sbjct: 527 ALRNGFLTFGSFSRMSKIGPAVVALWARVLREVPDARLVIGSISGQDEMDKLTERFAAE- 585
Query: 410 EQLGLESLRVDLLP---LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466
G+ + R+ LP +++ H Q +D+ LD FP+ G+TTT ++L+MGVP VT+
Sbjct: 586 ---GIGAARLGFLPRKGMLVYQEQHHQ----IDVCLDAFPFGGSTTTLQALWMGVPTVTL 638
Query: 467 AGSVHAHNVGVSLLTKVGLKH-LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
G A L+ +GL +A ++D+YV+ + LA+D+ ALA LR LR ++SP
Sbjct: 639 PGDSMASRSSTGWLSLLGLDAPFVAHDKDDYVRKCVTLAADIEALATLRRELRPHCAQSP 698
Query: 526 VCDGQNFALGLESTYRNMWHRYCKGDVP 553
V + A R MW R+C G P
Sbjct: 699 VFSAKPVADAASRALRIMWQRWCDGLAP 726
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 175/560 (31%), Positives = 274/560 (48%), Gaps = 35/560 (6%)
Query: 9 GEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQS 68
G++ +F A E A P A L K ++A + AL P +
Sbjct: 817 GKLTEFASAA---ERAATLLPDTLSAQTLLADALKITRQFEQAERHCREALKRHPESAGL 873
Query: 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128
++LGVV G+ + +A+A P A AY+ LGV + G A A + L+
Sbjct: 874 HHSLGVVLQSMGRHADSIACFRRAVALTPDNALAYDALGVALLEYGESKEAESALRRALE 933
Query: 129 IDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNTKDPERPLV 187
+ P N L + + +R++ R L ++ N ++P R L
Sbjct: 934 LAPTQAQVRSNLLFCLMHKYGIDAASACAEYREFATRHEAPLRARRPKHANQRNPSRRLR 993
Query: 188 IGYVSPDYFTHSVSYFI---------EAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
IG+VS D H ++YF+ + L H Y N+ + +D T E++
Sbjct: 994 IGFVSGDLSNHPIAYFLLSIVEYLARDTSLALHFYSNHTI--------SDGYT----EQI 1041
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
W + GI + +A +R D IDIL++L+GHT N+L A +PAPVQV+WIG P
Sbjct: 1042 RAHAQGWHPVAGISDAALAEKIRGDGIDILIDLSGHTGRNRLVTFAHKPAPVQVSWIGNP 1101
Query: 299 NTTGLPTIDYRITDSLADPPET-KQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
+TTGL IDY ++D P E ++ E+L+ LP + P P A V PAL NGF
Sbjct: 1102 STTGLTAIDYYMSDRFVTPLEQFARQFSEKLVFLP-ALAPFKPHPHAPDVNALPALQNGF 1160
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC--KPFCCDSVRHRFLSTLEQLGLE 415
+TFGSF+ + KI P+V+ +WAR+L VP+SR+V+ P V F + G++
Sbjct: 1161 MTFGSFSKMLKIGPEVIALWARVLRKVPHSRMVIGAIVAPEQISKVSALFANE----GID 1216
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ LP + +++ + +D+ LD FP+AG+TTT +L+MGVP VT+ G A
Sbjct: 1217 GSRISFLPRAGMA-AYLEQHHQIDVCLDAFPFAGSTTTMHALWMGVPTVTLPGVSMASRG 1275
Query: 476 GVSLLTKVGL-KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
L+++G+ + +A++ED++V + LA+D ALA +R LR ++S + A
Sbjct: 1276 STGWLSQLGIDEAFVARDEDDFVSKCVALAADPDALAMVRRELRAHCAQSSLISAGTIAD 1335
Query: 535 GLESTYRNMWHRYCKGDVPS 554
R MW R+C G P+
Sbjct: 1336 AASRALRAMWQRWCDGLEPA 1355
>gi|146342013|ref|YP_001207061.1| O-linked N-acetylglucosamine transferase [Bradyrhizobium sp. ORS
278]
gi|146194819|emb|CAL78844.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 278]
Length = 739
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 260/523 (49%), Gaps = 9/523 (1%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P A+ G +++ D A+ +Q AL+I P +L + ++ + A
Sbjct: 222 IRPRAAQVLAQRGRLHQQAGRFDPAMADFQAALAIDPRQDVALMGFAQLSVIRDNIAPAM 281
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
E K + NP A+ LG + G ++ + +E+ L+I PD +A ++ +++
Sbjct: 282 EACRKVLEQNPQSEVAWTWLGECFCKQGDLAAGLAHFERALEIKPDFGDAITAKIFLLDF 341
Query: 147 INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
+ + + R+W R ++ + +DPER L IGYVS D+ THS +
Sbjct: 342 MPDTDFAQHQAVRREWWTRIGAEIARRPTPVRARDPERRLTIGYVSSDFRTHSAALVFLP 401
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
L +HD+ ++KVV YS D T + R +W D + + + ++ + D +D
Sbjct: 402 VLRHHDHHSFKVVCYSCSPLQDTMTAQCR----AVADVWVDAWQMSDDELTERIEADAVD 457
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
ILV+L+GH+A N+L + A +PAP+QVT G TGLPT+DY D + P + + E
Sbjct: 458 ILVDLSGHSAGNRLPVFARKPAPIQVTAWGSGTGTGLPTMDYFFADPVTVPEDVRHLFAE 517
Query: 327 ELIRLPECFLCYTPSPEAG-PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
++ LP T P G P P L NG +TFG FN + KI+ L +WAR++ A+P
Sbjct: 518 QVYDLPAVI---TTDPLQGWQPTPLPMLRNGHVTFGVFNRIDKISDPALALWARLMAALP 574
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
NSR+V+K VR+ ++ G+ R+ L L H+ ++ +D+SLD F
Sbjct: 575 NSRIVIKNGALDDSLVRNALVARFVAHGIAEGRITCLGLS-SREQHIAQFAAIDMSLDPF 633
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
P G +T ESL GVP + G A ++ T VGL +A ++++YV +AL+ A+
Sbjct: 634 PQNGGVSTWESLQAGVPVICKLGRSAAGRAAAAINTAVGLPGWVAADDEDYVAMALKHAT 693
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
LA LR +L + + S + + + +E YR W RYC
Sbjct: 694 QPEELAKLRAALPAMAATSEAGNVETYTRKVEEGYRRFWCRYC 736
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV + + D+A A P AEA +NLG+ +R ++A +C + A++
Sbjct: 60 LHLLGVVALDGGQLDLAEQALTRAVEIEPRHAEALSNLGLALFNRKRYEEARKCQERAVA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPN +L LG G + A ++AIA P +A+AY N G+ G A
Sbjct: 120 LKPNLLVALTGLGNTLMRLGLPEEAIAAHDRAIALKPDFADAYCNRGMALLPLGRNVEAD 179
Query: 121 DAYEQCLKIDP 131
++++ L ++P
Sbjct: 180 QSFDRALSLNP 190
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
PH + + LGV+ D LD A + A+ I+P +++L+NLG+ + + + A +
Sbjct: 54 PHHFDTLHLLGVVALDGGQLDLAEQALTRAVEIEPRHAEALSNLGLALFNRKRYEEARKC 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
E+A+A P A LG G AI A+++ + + PD +A NR +A+
Sbjct: 114 QERAVALKPNLLVALTGLGNTLMRLGLPEEAIAAHDRAIALKPDFADAYCNRGMAL 169
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+A +++ A E A P+ A LG ++A+ + A++
Sbjct: 94 LSNLGLALFNRKRYEEARKCQERAVALKPNLLVALTGLGNTLMRLGLPEEAIAAHDRAIA 153
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KP+F+ + N G+ G+ A + ++A++ NP + EA G+
Sbjct: 154 LKPDFADAYCNRGMALLPLGRNVEADQSFDRALSLNPRHMEAMFGKGL 201
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
L++ P+ +L+ LGVV G++D A + + +A+ P +AEA +NLG+ +
Sbjct: 50 LALLPHHFDTLHLLGVVALDGGQLDLAEQALTRAVEIEPRHAEALSNLGLALFNRKRYEE 109
Query: 119 AIDAYEQCLKIDPD 132
A E+ + + P+
Sbjct: 110 ARKCQERAVALKPN 123
>gi|354598043|ref|ZP_09016060.1| hypothetical protein BrE312_2631 [Brenneria sp. EniD312]
gi|353675978|gb|EHD22011.1| hypothetical protein BrE312_2631 [Brenneria sp. EniD312]
Length = 1133
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 152/477 (31%), Positives = 251/477 (52%), Gaps = 12/477 (2%)
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
K + A E+ ++ I +P ++N+G++ +D G Y++ ++ NR
Sbjct: 151 KYEPAEEIFQELIKEDPGNWLYWSNMGMIKQDLGYFDEMDAVYQKGETTTKNNPTPFFNR 210
Query: 141 LLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSV 200
++ +Y E +++ + W F + K + L IG +S + +H V
Sbjct: 211 IVGAHYHPERTAEQILALCKSWQPIFKPAEKVRRAIAENKAANKRLRIGMISDGFRSHPV 270
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
I L + ++ YS D T +K+ W+ I +A ++
Sbjct: 271 GNMITIGLAHIPESQIELYAYSTNYSEDHIT----QKIQGICAQWKVIAETPHDALAQII 326
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG-YPNTTGLPTIDYRITDSLADPPE 319
REDKIDIL +L G+ AN+++ + PAP+Q+ W+G ++TGL T+DY ++D + PP
Sbjct: 327 REDKIDILFDLCGYNANSRMLTIQLSPAPIQIKWVGGLISSTGLETMDYLLSDHVETPPG 386
Query: 320 TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
+ E+LIRLP+ ++CY P P+ PA + G+ITFG FNN +KI +L WA
Sbjct: 387 VDVLYTEKLIRLPDDYICYEPPHYLPPISGLPATSKGYITFGCFNNASKINDILLAQWAI 446
Query: 380 ILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL---LPLILLNHDHMQAYS 436
IL AVPNSRL +K + S+ R +TLE+ G+ RV + P + + + +Y+
Sbjct: 447 ILHAVPNSRLFLKSFNYKNQSLSERIYATLEKHGIVRERVRIEGSSP----HKELLASYN 502
Query: 437 LMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEY 496
+DI+LD +PY+G TTCE++ MGVP VT+ G A S L G+ L+A + ++Y
Sbjct: 503 DVDIALDPWPYSGGLTTCEAMAMGVPVVTLPGPTFAGRHSASHLVNAGMPELLANDWEQY 562
Query: 497 VQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ + + +A+D+ +L+ +R LRD++ SPVCDG+ FA R +W RYC+G P
Sbjct: 563 INITVGIANDLNSLSVIRQHLRDILLSSPVCDGKRFAKHFSDAMRAIWQRYCEGKAP 619
>gi|206558517|ref|YP_002229277.1| putative TPR repeat protein [Burkholderia cenocepacia J2315]
gi|444358767|ref|ZP_21160141.1| tetratricopeptide repeat protein [Burkholderia cenocepacia BC7]
gi|444367389|ref|ZP_21167339.1| tetratricopeptide repeat protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198034554|emb|CAR50419.1| putative TPR repeat protein [Burkholderia cenocepacia J2315]
gi|443602945|gb|ELT70984.1| tetratricopeptide repeat protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443603327|gb|ELT71348.1| tetratricopeptide repeat protein [Burkholderia cenocepacia BC7]
Length = 780
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 261/515 (50%), Gaps = 23/515 (4%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
+ L++A E + ++P+ ++ G+V +MD A +A+ P A
Sbjct: 258 NRLEEADEQCTRLIQLQPDHPEAFRIRGLVLFALRRMDEAIAACRRAVELAPGAAAPCGT 317
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165
LG + + G+ A+ ++ ++I+P + L + +I++ L HR +G+R
Sbjct: 318 LGFVLLEQGATQEAMGWLKRSIEINPTDSVTHSSMLFCITHISDFDPQALITEHRKFGER 377
Query: 166 FMRLYSQYTS-WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVV--YS 222
+ + + + N++DP R L +G+VS D F+H+V+ + P++ H + + + Y
Sbjct: 378 YGNHKRKRAAVFSNSRDPARKLQVGFVSGDLFSHAVASY-AVPVIEHLAADPGIAMHFYH 436
Query: 223 AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGM 282
+ D + RF+ WR + G+ + VR D+IDI+++L+GHT N+L
Sbjct: 437 NHFEEDHVSERFKAHATT----WRTVAGMSDTAFLERVRNDRIDIVIDLSGHTGRNRLVA 492
Query: 283 MACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPS 341
+A + APVQ +WIGYP TTGL +DY + D P + + + VE ++RLP + P
Sbjct: 493 LAQRAAPVQASWIGYPATTGLAAMDYYLADRFLAPHGQFEDQFVERIVRLP-AIASFMPP 551
Query: 342 PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
PV PAL NG+ T+GSFN L K++ V+ VWAR+L A P +R+ + +
Sbjct: 552 VNCPPVNVLPALHNGYTTYGSFNRLNKLSSHVIAVWARVLHADPTARMALGA--IGNEGD 609
Query: 402 RHRFLSTLEQLGLESLRVDL-----LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
+ G+++ R+ +P+ +MQ + +D+ LDTFPY G+TTT
Sbjct: 610 QQTLTEWFVAAGIDASRLSFHRRSNIPV------YMQQHHGVDLCLDTFPYTGSTTTLNG 663
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMS 516
L+MGVP +T+ GS A S L VG IA +ED++V AL L+SD T L LR
Sbjct: 664 LWMGVPTLTIPGSTMAGRGSASWLQHVGCDAYIANDEDDFVAKALALSSDTTTLQALRAG 723
Query: 517 LRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
LR S S A GL S R MW R+C +
Sbjct: 724 LRARCSASAAFRPDVVAAGLSSALRTMWVRWCANE 758
>gi|365880801|ref|ZP_09420147.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 375]
gi|365291080|emb|CCD92678.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 375]
Length = 713
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 264/523 (50%), Gaps = 9/523 (1%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P A+ G +++ D A+ +Q AL+I P +L + ++ + A
Sbjct: 196 IRPGAAQVLAQRGRLHQQAGRFDPAMADFQAALAIDPRQEVALMGFAQLSVIRDNIAPAM 255
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
+ K + NP A+ LG + G ++ ++ +E+ L+I PD +A ++ +++
Sbjct: 256 DACRKVLEQNPQSEVAWTWLGECFCKQGDLATGLEHFERALEIKPDFGDAITAKIFLLDF 315
Query: 147 INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
+ + + R+W R ++ + +DPER L IGYVS D+ THS +
Sbjct: 316 MPDTDFARHQAVRREWWSRIGAEIARRPTPVRDRDPERRLTIGYVSSDFRTHSAALVFLP 375
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
L +HD+ +KVV YS D T++ R +W D + + ++++ + D +D
Sbjct: 376 VLRHHDHGVFKVVCYSCSPLQDTMTVQCR----AAADVWVDAWQMSDEELTDRIEADGVD 431
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
ILV+L+GH+A N+L + A +PAP+QVT G TGLPT+DY D + P + + E
Sbjct: 432 ILVDLSGHSAGNRLPVFARKPAPIQVTAWGSGTGTGLPTMDYFFADPVTVPEDVRHLFAE 491
Query: 327 ELIRLPECFLCYTPSPEAG-PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
++ LP T P G P P L G +TFG FN + KI+ L +WAR++ A+P
Sbjct: 492 QVYDLPAVI---TTDPLQGWQPTPLPMLRTGTVTFGVFNRIDKISKPALALWARLMAALP 548
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
+SR+V+K VR+ ++ G+ R+ L L + H+ ++ +D+SLD F
Sbjct: 549 DSRIVIKNGALDDALVRNALVARFVAHGIAEGRITCLGLSSRDQ-HIAQFAEIDMSLDPF 607
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
P G +T ESL GVP + G A ++ T VGL +A+++D Y+ +AL+ A+
Sbjct: 608 PQNGGVSTWESLQAGVPVIAKLGRGAAARAAAAINTAVGLGGWVAEDDDGYIAIALKHAA 667
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
LA LR +L ++++S + + + +E YR W RYC
Sbjct: 668 QPAELAKLRAALPAMVARSAAGNVETYTRKVEEGYRQFWRRYC 710
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV + + D+A A P AEA +NLG+ +R +A +C + A++
Sbjct: 34 LHLLGVVALDSGQLDLAEQALTKAVEIEPRHAEALSNLGLALFNRKRYQEARKCQERAVA 93
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPN +L LG G + A ++AIA P YA+AY N G+ G A
Sbjct: 94 LKPNLLVALTGLGNTLMRLGLPEEAIAAHDRAIALKPDYADAYCNRGMALLPLGRNVEAD 153
Query: 121 DAYEQCLKIDP 131
++++ L ++P
Sbjct: 154 QSFDRALSLNP 164
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LGV+ D LD A + A+ I+P +++L+NLG+ + + A +
Sbjct: 28 PEHFDALHLLGVVALDSGQLDLAEQALTKAVEIEPRHAEALSNLGLALFNRKRYQEARKC 87
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
E+A+A P A LG G AI A+++ + + PD +A NR +A+
Sbjct: 88 QERAVALKPNLLVALTGLGNTLMRLGLPEEAIAAHDRAIALKPDYADAYCNRGMAL 143
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
Y+ D V C Q+ L++ P +L+ LGVV G++D A + + KA+ P +AE
Sbjct: 8 YRAGRPADTQVICGQI-LALLPEHFDALHLLGVVALDSGQLDLAEQALTKAVEIEPRHAE 66
Query: 102 AYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A +NLG+ + A E+ + + P+
Sbjct: 67 ALSNLGLALFNRKRYQEARKCQERAVALKPN 97
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+A ++ A E A P+ A LG ++A+ + A++
Sbjct: 68 LSNLGLALFNRKRYQEARKCQERAVALKPNLLVALTGLGNTLMRLGLPEEAIAAHDRAIA 127
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KP+++ + N G+ G+ A + ++A++ NP + EA G+
Sbjct: 128 LKPDYADAYCNRGMALLPLGRNVEADQSFDRALSLNPRHMEAMFGKGL 175
>gi|365891966|ref|ZP_09430320.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3809]
gi|365332036|emb|CCE02851.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3809]
Length = 739
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 261/523 (49%), Gaps = 9/523 (1%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P + G +++ D+A+ +Q AL+I+P +L + V+ + A
Sbjct: 222 IRPRAPQVLAQRGRLHQQAGRFDQAMADFQAALAIEPRQDVALMGFAQLSVVRDNIAPAM 281
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
+ K + P A+ LG + G ++ + +E+ L+I PD +A ++ +++
Sbjct: 282 DACRKVLEQTPQSEVAWTWLGECFCKQGDLATGLQHFERALEIKPDFGDAITAKIFLLDF 341
Query: 147 INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
+ + + R+W R ++ + +DPER L +GYVS D+ THS +
Sbjct: 342 MPDTDFVQHQAVRREWWTRIGARIARRPAPVRERDPERRLTVGYVSSDFRTHSAALVFLP 401
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
L +HD+Q +KVV YS D T + R +W D + + ++++ + D +D
Sbjct: 402 VLRHHDHQAFKVVCYSCSPLQDTMTAQCR----AAADVWVDAWQMSDEELTERIEADAVD 457
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
ILV+L+GH+A N+L + A +PAP+QVT G TGLPT+DY D + P + + E
Sbjct: 458 ILVDLSGHSAGNRLPVFARKPAPIQVTAWGSGTGTGLPTMDYFFADPVTVPEDVRHLFAE 517
Query: 327 ELIRLPECFLCYTPSPEAG-PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
++ LP T P G P P L NG++TFG FN + KI+ L +W+R++ A+P
Sbjct: 518 QVHDLPAVI---TTDPLQGWQPTPLPMLRNGYVTFGVFNRIDKISDPALALWSRLMAALP 574
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
+SR+++K VR ++ G+ RV L L + H+ ++ +D+SLD F
Sbjct: 575 DSRIIIKNGALDDALVRDALVARFVAHGIAEQRVTCLGLSTRDQ-HIAQFAAIDLSLDPF 633
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
P G +T ESL GVP + G A ++ VGL +A ++D Y+ +AL+ A+
Sbjct: 634 PQNGGVSTWESLQAGVPVICKLGKGAAARAAAAINIAVGLGDFVAADDDGYLAIALRHAA 693
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
LA LR +L +++ S + + + +E YR W RYC
Sbjct: 694 QPAELARLRAALPAMVAGSAAGNVETYTRKVEEGYRQFWRRYC 736
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV + +F++A A P AEA +NLG+ +R ++A +C + A++
Sbjct: 60 LHLLGVVALDGGQFELAEQALTRAVEIEPRHAEALSNLGLALFNRKRYEEARKCQERAVA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPN ++ LG G + A ++AIA P YA+AY N G+ G A
Sbjct: 120 LKPNLLVAITGLGNTLMRLGLPEEAIAAHDRAIALKPDYADAYCNRGMALLPLGRNVEAD 179
Query: 121 DAYEQCLKIDP 131
++++ L ++P
Sbjct: 180 QSFDRALSLNP 190
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LGV+ D + A + A+ I+P +++L+NLG+ + + + A +
Sbjct: 54 PAHVDALHLLGVVALDGGQFELAEQALTRAVEIEPRHAEALSNLGLALFNRKRYEEARKC 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
E+A+A P A LG G AI A+++ + + PD +A NR +A+
Sbjct: 114 QERAVALKPNLLVAITGLGNTLMRLGLPEEAIAAHDRAIALKPDYADAYCNRGMAL 169
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+A +++ A E A P+ A LG ++A+ + A++
Sbjct: 94 LSNLGLALFNRKRYEEARKCQERAVALKPNLLVAITGLGNTLMRLGLPEEAIAAHDRAIA 153
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KP+++ + N G+ G+ A + ++A++ NP + EA G+
Sbjct: 154 LKPDYADAYCNRGMALLPLGRNVEADQSFDRALSLNPRHMEAMFGKGL 201
>gi|157145279|ref|YP_001452598.1| hypothetical protein CKO_01016 [Citrobacter koseri ATCC BAA-895]
gi|157082484|gb|ABV12162.1| hypothetical protein CKO_01016 [Citrobacter koseri ATCC BAA-895]
Length = 1090
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 172/522 (32%), Positives = 276/522 (52%), Gaps = 17/522 (3%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
L I+ ++ +A + L +P ++ + + L +Y + A KAI P
Sbjct: 573 LSAIFYRKNWRWQAGRLARAILRAEPGYAAAWDLLSSLYREMMEYTLAEMCSRKAIEIEP 632
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFE 157
A NLG + D +S AI + ++++P + NA N L + + E L E
Sbjct: 633 RSAGIIENLGTILGDQSKMSEAIPYLRRVVELEPGNFNAFTNLLFGLTHSTELTAQDLLE 692
Query: 158 AHRDWGKRFMRLYS-QYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYH-DYQN 215
H+ +G R S Q + +T++ + L IG+VS D+ H V+ F+ AP+ Y D
Sbjct: 693 EHKQFGLAAERWASKQPFTITHTREEKSRLRIGFVSGDFGRHPVTNFL-APVWYSLDRDR 751
Query: 216 YKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT 275
+++ Y D T E++M+ +W + + + A V+ D IDILV+L+GHT
Sbjct: 752 FEIYGYQNSPLQDEVT----ERLMESACVWSKVTHLSHLEFAEQVKRDGIDILVDLSGHT 807
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS-LADPPETKQKHVEELIRLPEC 334
N+L A +PAPVQ++WIGYP TTG+ T+DY + DS A+P VE+LI LP
Sbjct: 808 GYNRLPAFALKPAPVQLSWIGYPGTTGMATVDYYLIDSRFAEPGVLDPAFVEKLIYLP-A 866
Query: 335 FLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCK 394
+ P+ E+ V P PAL NGFITF SFN KI +V++VW++IL ++P +RL++
Sbjct: 867 VQQFHPNKESPDVGPLPALKNGFITFASFNRPKKINDEVVRVWSKILHSIPEARLLIG-- 924
Query: 395 PFCCDS--VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
+ DS V H F ++ G+ R+ L + H+++ ++ +D+ LDTFPY G TT
Sbjct: 925 -YMSDSNMVNH-FRMLFKEQGINEERL-LFRQKMSLHEYLALHNDIDVLLDTFPYTGGTT 981
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
T +++MGVP +T+AG A + L GL+ +A ++++Y+ A+ L+ ALA
Sbjct: 982 TWHAIWMGVPTLTIAGDTIASRQCSAGLNFCGLQDFVAVDKEQYIAKAVLLSEQTHALAE 1041
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LR SLR + + V + A+ E +W RYC+G P+
Sbjct: 1042 LRQSLRSRLKEKSVSQVRE-AIYFERALEIIWQRYCQGLPPA 1082
>gi|365895215|ref|ZP_09433338.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3843]
gi|365424074|emb|CCE05880.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3843]
Length = 746
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 270/556 (48%), Gaps = 13/556 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G A+ ++ + + AI + +A P N G ++A+ + ++
Sbjct: 193 LINRGCAFKDLGRANEAIAEFNMALALAPDDTTILINRGETLLSLKRNEEALADFDRVIA 252
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + + + +++ A E ++A+A P +A +G G+ A+
Sbjct: 253 LDPGLALGWLGRANILMMSKRVNEALEACQRAVAIEPNSTKALTQIGQCQALLGNAEAAV 312
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQY--TSWDN 178
+++ L I+P A +R+ ++++ G EA W + +Q N
Sbjct: 313 SFFDRALAINPADEVALVSRIFSLDFCEVGFAQHQ-EARAQWWRHIGSKIAQAHPPQHHN 371
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
+DP R +V+GYVS D+ HS +Y L HD ++V+ YS D T FR
Sbjct: 372 ERDPGRRIVLGYVSGDFRQHSAAYSFRPVLENHDKSRFEVICYSTSPIEDDVTASFR--- 428
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ WRD+ + ++A +R D IDIL++L+GHT N+L A +PAPVQVT G
Sbjct: 429 -RVADGWRDVVQWSDDQLADCIRADGIDILIDLSGHTRGNRLRTFARKPAPVQVTAWGDG 487
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TGLPT+DY +D + P + + E++ LP C L P P A P ++NG+I
Sbjct: 488 TGTGLPTMDYLFSDPVRAPMDVRYHFAEQVYDLP-CTLIIEPPPAALRAPEPPVISNGYI 546
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
T+G F ++++ V VWA IL + +SRLV+K +++ R L G+ S R
Sbjct: 547 TYGVFTRASRLSNAVFDVWASILQSDGSSRLVIKDSLLNDVTIQGRLLERFAARGISSDR 606
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+DL+ H+ AY L+DI LD FP+ G +T E+L+MGVP VT G+ + +G
Sbjct: 607 IDLMGST-SREAHLTAYRLIDICLDPFPHGGGVSTWETLHMGVPVVTKLGNGMSSRLGAG 665
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
L +G+ IA ++ +Y +AL+ D L +R L +L++ C ++ +E
Sbjct: 666 FLAAIGMHDWIASDDAQYADIALRSTPD--QLRTIRSQLPELIAAR--CSPASYTRAVED 721
Query: 539 TYRNMWHRYCKGDVPS 554
YR MW +C P+
Sbjct: 722 AYRMMWQTWCSKPQPT 737
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 61/152 (40%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y LGV + A A +PH A AC L V +A+ CY ++
Sbjct: 57 LYLLGVCEHQSGNSAAAEPLLRRALQVDPHSATACYALAVTLSALRRDGEALACYDNLIA 116
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
KP+F + N G + + G+ A E + AIA +P + +A G G AI
Sbjct: 117 FKPDFVNAHLNRGRLLSRHGRFLEAIESYDNAIALDPQHQDALIGKGEALHYLGRFVDAI 176
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
Y++ L P A NR A + ++
Sbjct: 177 ACYDRILAAKPTHLGALINRGCAFKDLGRANE 208
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y L V + + A+ Y+ F P A N G + +A+E Y A+++
Sbjct: 92 YALAVTLSALRRDGEALACYDNLIAFKPDFVNAHLNRGRLLSRHGRFLEAIESYDNAIAL 151
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P +L G G+ A ++ +AA PT+ A N G ++D G + AI
Sbjct: 152 DPQHQDALIGKGEALHYLGRFVDAIACYDRILAAKPTHLGALINRGCAFKDLGRANEAIA 211
Query: 122 AYEQCLKIDPDSRNAGQNR 140
+ L + PD NR
Sbjct: 212 EFNMALALAPDDTTILINR 230
>gi|429105158|ref|ZP_19167027.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter malonaticus 681]
gi|426291881|emb|CCJ93140.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter malonaticus 681]
Length = 1116
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/498 (32%), Positives = 256/498 (51%), Gaps = 33/498 (6%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N+LG +Y +G M A + +A P +GV+ D + A E+ L++
Sbjct: 631 NSLGTLYHARGDMTLAEKCAREAFRFQPRNPRYLAMMGVVLSDNQKLDEARYFLEKSLEL 690
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT---SWDNTKDPERPL 186
P+ + + L + + N +L HRD+G+R + +N KDP R L
Sbjct: 691 SPEDFDCFTSLLFVLTHDNRVSAQELLAKHRDYGERVTSYAERLALNLPLNNVKDPHRKL 750
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
+G+VS D TH VS F+ D +++V Y+A D T R + +WR
Sbjct: 751 RVGFVSGDLRTHPVSNFLLPFWESFDRTQFELVGYNAAPMHDEVTDHLRAGAV----LWR 806
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
D+Y + ++++A +V +D +DIL++L+GHT +L M A +PAP+Q+TWIGYP TTG+P +
Sbjct: 807 DVYQLSDRELARLVNDDGVDILIDLSGHTTWTRLPMFALRPAPLQMTWIGYPGTTGVPAM 866
Query: 307 DYR-ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNN 365
DYR ++ +LA PP ++ E+++ +P + P P++ V P PAL NG +TF SFN
Sbjct: 867 DYRLLSSTLASPPGLAEQFTEQILWVP-MRKIFEPHPQSPDVNPLPALRNGHLTFASFNR 925
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD----SVRHRFLSTL----EQLGLESL 417
KI +VL++WA+IL P +RL++ F D ++ R L+ EQL +
Sbjct: 926 PKKINDEVLELWAQILVREPGARLLMG---FMADDEMIAMMTRRLTHFGARPEQLIFRT- 981
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R L+ ++++ + +DI LD FPY G TTT +MGVP +T+ G A GV
Sbjct: 982 RTGLI-------EYLEYHHHIDILLDAFPYTGGTTTNHGAWMGVPTLTLCGETMAGRQGV 1034
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV--CDGQNFALG 535
+ GL +A ++ +YV AL L +R+S+R S+ P DG A
Sbjct: 1035 ETMNGYGLPEFVASDKADYVDKALSWQGRFEELNAIRLSMR---SRIPTDNADGFRVAET 1091
Query: 536 LESTYRNMWHRYCKGDVP 553
E R+ W YC G+ P
Sbjct: 1092 FEKGLRDAWKIYCTGEAP 1109
>gi|78064815|ref|YP_367584.1| hypothetical protein Bcep18194_A3338 [Burkholderia sp. 383]
gi|77965560|gb|ABB06940.1| TPR repeat protein [Burkholderia sp. 383]
Length = 595
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 256/518 (49%), Gaps = 11/518 (2%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
NLG + + + A EC+++A+ ++P++ + NNLG + G A + +AIA
Sbjct: 79 NLGNVMQADNRHAAAAECFRLAIELRPDYVDAYNNLGNALRLAGDARTAVDAFCQAIALK 138
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG--HDDK 154
P +AYNNL D I A++AY + + P+ N L A ++ +E HD
Sbjct: 139 PDNGQAYNNLANALFDLNEIPAALEAYRHAVALRPELPEPRSNLLFA-SHCSEAFDHDAY 197
Query: 155 LFEAHRDWGKRFMRLYSQYTSW--DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
L EA R + + R + +T W D T RPL +G VS D H V YFIE+ L + D
Sbjct: 198 LAEAAR-YDEVVTRCATPWTDWLVDLTARAGRPLKVGIVSGDLKAHPVGYFIESMLKHLD 256
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
++ Y D T R + W I G+ ++ AA VR D+ID+L++
Sbjct: 257 ANRIEMHAYPTRDVEDDVTARIKPAF----ATWTCIAGLSDEAAAARVRADRIDVLLDAA 312
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
GHT N+L + A +PAP+Q +W GY +TG+ IDY I D PP E LP
Sbjct: 313 GHTVYNRLPLFAWKPAPLQASWPGYFASTGVRAIDYVIGDRHVLPPTEAAHFTERPWHLP 372
Query: 333 ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
+ +LC+TP E V P L NG TFG F LAKIT V+ VW+ +L +V ++L VK
Sbjct: 373 DSYLCFTPPAEPVDVGALPMLANGHPTFGYFGKLAKITDHVVAVWSSVLRSVAGAKLFVK 432
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
+ + + G+++ R+ +L +++ AY +D+ L FPY G TT
Sbjct: 433 AEHLDDPREQQALAARFAAHGIDAQRL-ILEGRSPRAEYLAAYRRVDLMLSPFPYPGGTT 491
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
T E+L+MGVP + G ++ SLL L IA ++D YV A+ LA
Sbjct: 492 TAEALWMGVPVLCRRGERFLSHIAESLLHSARLPGWIADDDDAYVAKAVAQVGQPAELAA 551
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
LR +LR + SP+CD FA E MW ++ +
Sbjct: 552 LRTTLRAQVLASPLCDAPRFARHFEDALHGMWAQHVEA 589
>gi|351732456|ref|ZP_08950147.1| hypothetical protein AradN_21891 [Acidovorax radicis N35]
Length = 733
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/566 (31%), Positives = 268/566 (47%), Gaps = 56/566 (9%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG + A++ YQ A+ + PN ++ L N V Q + A ++EK P
Sbjct: 46 LGFSLNKQREFGAALKAYQQAVVLWPNDAELLINYANVLIEQARNIDALPLLEKVCKLRP 105
Query: 98 TYAEAYNNLG-------------------------------------VLYRDAGSISLAI 120
A + L + R+ G + A+
Sbjct: 106 RQAIGWIKLAECCYLLTLHDKGFDASQTAAALAETLHDRVAALMQSAIHRRELGQVREAV 165
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-LYSQYTSWDNT 179
E + + + N+LL M + +L A R +G F L ++ +
Sbjct: 166 KDCETAIALRYNDPGNYTNKLLFMLADPQVDAAQLSAAARQYGAVFEPPLRPEWPDFQEH 225
Query: 180 K-DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
+ P + L IG++SPD+ HSV YF+E L D + ++V + + D T E+V
Sbjct: 226 RGSPWQRLKIGFLSPDFRVHSVMYFVEGLLAQLDRRQFEVFAFYLFPRDDHVT----ERV 281
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ + + G ++ A +R IDIL++L GHT NN L +A + APVQV+W+G+P
Sbjct: 282 QRHADHFVPLAGFSPQQQAEAIRAQGIDILIDLAGHTGNNGLLTLAHKAAPVQVSWLGFP 341
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP---------VCP 349
TTGL +DY+ TD + DPP ++ E+L RLP F CY P P V P
Sbjct: 342 ATTGLTAVDYKFTDEITDPPGADAQYTEQLYRLPTLFACYRPMSR-NPLWRYQPRYQVRP 400
Query: 350 TPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
PALTNGFITFGS NNL K+T +VL +W ++L AVP SRL+++ K +
Sbjct: 401 APALTNGFITFGSCNNLGKLTDEVLALWGQVLAAVPGSRLLIEGKNLDRPDFAQAYRERC 460
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
E+LGL +VDL + + Y +DI+LD FP G TTT + L+MG+P V+M G
Sbjct: 461 ERLGLPPGQVDL--VAQRTDNQYLTYHRIDIALDPFPLTGGTTTFDVLWMGLPIVSMVGE 518
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
+GV LL +G +A+ ++YV++A LA+DV AL LR+ LR + S +
Sbjct: 519 SFKSRMGVGLLAYLGRTEWLAETPEDYVRIAKSLAADVEALNTLRLGLRGEVEASALMRE 578
Query: 530 QNFALGLESTYRNMWHRY-CKGDVPS 554
F R MW ++ K + P+
Sbjct: 579 DIFNHHFAEGLRVMWLQWLAKAEHPN 604
>gi|316932807|ref|YP_004107789.1| hypothetical protein [Rhodopseudomonas palustris DX-1]
gi|315600521|gb|ADU43056.1| TPR repeat-containing protein [Rhodopseudomonas palustris DX-1]
Length = 715
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/551 (29%), Positives = 274/551 (49%), Gaps = 18/551 (3%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI- 61
+ G A ++ ++D A+ Y A +P A N +K+ D+A+ CY ALSI
Sbjct: 162 DRGNALHKLGRYDEALASYARAIEIDPLNDIAFINRATTFKELKQFDQALACYDRALSIG 221
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
K + + ++ DA A + P A LG G A
Sbjct: 222 KRPVEAGIARAETLLFMKNVKDALA-TCTAVLQVEPNSVPALTLLGNCMAALGDAETATT 280
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW----GKRFMRLYSQYTSWD 177
+ + L++ P+ A +++ +M++ + + W G R + +
Sbjct: 281 LHSRALELRPNFEAAISSKIFSMDFCAGSTIEAQQATRKTWWTQVGAPIYRACAVPPT-- 338
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
N +DP+R LV+GYVS D+ HS ++ + +HD ++VV+YS VV D T F
Sbjct: 339 NDRDPDRRLVVGYVSADFRAHSAAFSFRPVIEHHDRSQFEVVLYSGVVIPDDVTRAFEAT 398
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
K WRD+ + ++++A +++DK+D+LV+L+GH+ N+L + A +PAPVQVT G+
Sbjct: 399 ADK----WRDMTHMTDQQLADQIKQDKVDVLVDLSGHSGGNRLRVFARKPAPVQVTAWGH 454
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
TGLP +DY + D +A P E + + E + LP + P P+ P NG+
Sbjct: 455 ATGTGLPVMDYLLGDPVAIPVEDRHFYAEAIYDLPSIVIV-EPLPDEWRSQDLPFDRNGY 513
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+T+GS N ++K++ ++VWA++L AVP SRL++K +VR L G+ +
Sbjct: 514 LTYGSLNRISKMSDAAIEVWAQLLAAVPTSRLILKDHQIDDPAVRQTLLEKFGARGIAAD 573
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ LL DH++ +D+ LD FP AG +T E+LYMGV V+ G+ + VG
Sbjct: 574 RITLLG-SSSRQDHLETLKQIDLCLDPFPQAGGVSTWEALYMGVAVVSRLGNAVSSRVGC 632
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
++L GL IA ++ Y+++A + D+ L ++R LR + + C + +E
Sbjct: 633 AVLAAAGLPDFIATDDARYIEIASK--PDLERLRSIRRGLRGFILER--CGPAAYTRAVE 688
Query: 538 STYRNMWHRYC 548
YR MW R+C
Sbjct: 689 DAYRTMWKRWC 699
>gi|115524678|ref|YP_781589.1| hypothetical protein RPE_2672 [Rhodopseudomonas palustris BisA53]
gi|115518625|gb|ABJ06609.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris
BisA53]
Length = 759
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 171/598 (28%), Positives = 275/598 (45%), Gaps = 47/598 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y+LG+A + AI + A + AEA G+ DKAVE + A ++
Sbjct: 125 YSLGLALLTENRRREAIAALDRALVLDASYAEAYRTRGLALAMDGQFDKAVEDMRAAAAL 184
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEM--------------------------------- 88
+ S+++ +LG+++ + A +
Sbjct: 185 SSDNSRAIIDLGLMFGRAERDQQAGRLFEAAAKAAPRLALAQYYYGHFLINHKRFQEGLD 244
Query: 89 -IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
I+ A+ +P + +++ G Y G I A+ A+ Q K+ PD+ L A+ +
Sbjct: 245 YIDNALELDPLHTDSHVARGFGYLGQGRIEDAVAAFRQAGKLKPDNAPIAGTLLFALQHK 304
Query: 148 NEGHDDKLFEAHRDWGKRFMRLYSQ-YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
+ +L H+ W + + R S +DN DP R +G VS D H+ ++
Sbjct: 305 PGVTESELLTEHKKWARLYRRGVSHDRLLFDNDPDPRRRPRLGIVSADMHRHAAAFLTLT 364
Query: 207 PLVYHDYQNYKVVVYSAVVK--ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDK 264
+++V + K D + RF+ ++ WRDI +D+ + DK
Sbjct: 365 AFEQLTGLGFEIVCFKTDRKRVEDDVSDRFKAIALE----WRDISDLDDAAAITQIMSDK 420
Query: 265 IDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH 324
ID+L +L+GHTA N+LG+ + AP+Q+ W GY T GL T + I D + P +
Sbjct: 421 IDVLFDLSGHTAGNRLGVFERRAAPIQLGWAGYVGTVGLDTYEGIIADRVEIPHGHDGYY 480
Query: 325 VEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAV 384
E +IRLP+C++ Y P A V P ++ TFG FN AK+ V + W RIL V
Sbjct: 481 TEPVIRLPDCYVSYLPPIGAPAVGQLPCISRDQFTFGCFNRPAKLNEAVARTWKRILDQV 540
Query: 385 PNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
P++R+++ S R L L + G+++ RV+L+ +Q Y+ +D++LD
Sbjct: 541 PSARVLMIYGGLQETSTREAVLGVLARCGIDTGRVELVGE-FEQSKLLQGYNQVDLALDP 599
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
FPY+G TT E+++MGVP VT+ G A S LT GL ED+YV A+ A
Sbjct: 600 FPYSGGVTTLEAMWMGVPVVTLTGGTFAGRHSASHLTAAGLTEFCTTTEDQYVSTAVAWA 659
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC-----KGDVPSLKR 557
ALA LR +LR+ ++ SP+CD FA L + +W +C + D P R
Sbjct: 660 GRRDALAALRATLRERVASSPLCDAGRFAGHLSAELNRLWQGWCSERRARADFPERIR 717
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 55/135 (40%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LGVA +FD AI ++ F+ A +G Y K + + L +
Sbjct: 57 FRLGVALCRADRFDEAIEAFQRELLFSRDHGPATAEIGTCYARTGRAAKGIPYLERGLKL 116
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PN + +LG+ + + A +++A+ + +YAEAY G+ G A++
Sbjct: 117 LPNQPLAQYSLGLALLTENRRREAIAALDRALVLDASYAEAYRTRGLALAMDGQFDKAVE 176
Query: 122 AYEQCLKIDPDSRNA 136
+ D+ A
Sbjct: 177 DMRAAAALSSDNSRA 191
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 2/160 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ G+ + ++ A+ + A PH LGV D D+A+E +Q L
Sbjct: 22 LHEEGIRHARANQWKRALAAFREAVQLAPHLPHLNFRLGVALCRADRFDEAIEAFQRELL 81
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ + +G Y G+ +E+ + P A +LG+ AI
Sbjct: 82 FSRDHGPATAEIGTCYARTGRAAKGIPYLERGLKLLPNQPLAQYSLGLALLTENRRREAI 141
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
A ++ L +D A + R LA+ +G DK E R
Sbjct: 142 AALDRALVLDASYAEAYRTRGLALAM--DGQFDKAVEDMR 179
>gi|148256896|ref|YP_001241481.1| SPINDLY family O-linked N-acetylglucosamine transferase
[Bradyrhizobium sp. BTAi1]
gi|146409069|gb|ABQ37575.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. BTAi1]
Length = 739
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 162/528 (30%), Positives = 262/528 (49%), Gaps = 19/528 (3%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P A+ G +++ D A+ +Q ALSI P +L + ++ + A
Sbjct: 222 IRPRAAQVLAQRGRLHQQAGRFDPAMADFQAALSIDPRQEVALLGFAQLSVIRDNVAPAM 281
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
+ K + NP A+ LG + G ++ A+ +E+ L++ PD +A ++ +++
Sbjct: 282 DACRKVLEQNPASEVAWTWLGECFAKQGDLTTALQHFERALELKPDFGDAITAKIFLLDF 341
Query: 147 INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
+ E + R W R ++ +DPER L IGYVS D+ THS +
Sbjct: 342 MPETDFVQHQAVRRQWWSRIGAQIARRPPPLRDRDPERRLTIGYVSADFRTHSAALVFLP 401
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
L +HD+Q +KV YS D T + R +W D + + ++++A + D +D
Sbjct: 402 VLRHHDHQAFKVACYSCSPLQDVMTAQCR----AAADLWVDAWQMSDEELADRIEADGVD 457
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
ILV+L+GH+A N+L + A +PAPVQVT G TGLPT+DY D + P + E
Sbjct: 458 ILVDLSGHSAGNRLPVFARKPAPVQVTAWGSGTGTGLPTMDYFFADPVTVPEAVRPLFAE 517
Query: 327 ELIRLPECFLCYTPSPEAGPVCPT--PALTNGFITFGSFNNLAKITPKVLQVWARILCAV 384
++ LP T P G PT P L NG++TFG FN + KI+ L +W+R++ A+
Sbjct: 518 QVYDLPAVI---TTDPLQG-WQPTSLPMLRNGYVTFGVFNRIDKISEPALALWSRLMAAL 573
Query: 385 PNSRLVVK----CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
P++R+V+K P D + RF++ G+ R+ L L + H+ ++ +D+
Sbjct: 574 PDARIVIKNGALQDPLLRDGLVARFVAH----GIAQDRITCLGLSTRDQ-HIAQFAAIDM 628
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
SLD FP G +T E+L GVP V G A ++T VGL +A+++D Y+ +A
Sbjct: 629 SLDPFPQNGGVSTWETLQAGVPVVAKLGRGAAGRAAAGIITAVGLHDWVAEDDDGYIAIA 688
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
L A LA LR L +++ S + + + +E YR W RYC
Sbjct: 689 LAHAGRPADLAKLRTELPSMVASSAAGNVETYTRRVEEGYRLFWRRYC 736
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV + + DMA A P AEA +NLG+ +R ++A +C ++A++
Sbjct: 60 LHLLGVVALDSGQLDMAEQALTKAVEAEPRHAEALSNLGLALFNRKRYEEARKCQELAVA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPN +L LG G+ + A ++AIA P YA+AY N G+ + A
Sbjct: 120 LKPNLVVALTGLGNTLMRLGRPEEAIVAHDRAIALKPDYADAYCNRGMALLPLNRNAEAN 179
Query: 121 DAYEQCLKIDP 131
+++ L ++P
Sbjct: 180 QNFDRALSLNP 190
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LGV+ D LD A + A+ +P +++L+NLG+ + + + A +
Sbjct: 54 PEHFDALHLLGVVALDSGQLDMAEQALTKAVEAEPRHAEALSNLGLALFNRKRYEEARKC 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
E A+A P A LG G AI A+++ + + PD +A NR +A+ +N
Sbjct: 114 QELAVALKPNLVVALTGLGNTLMRLGRPEEAIVAHDRAIALKPDYADAYCNRGMALLPLN 173
Query: 149 E 149
Sbjct: 174 R 174
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
C Q+ L++ P +L+ LGVV G++D A + + KA+ A P +AEA +NLG+
Sbjct: 46 CGQI-LALLPEHFDALHLLGVVALDSGQLDMAEQALTKAVEAEPRHAEALSNLGL 99
>gi|27379562|ref|NP_771091.1| hypothetical protein blr4451 [Bradyrhizobium japonicum USDA 110]
gi|27352714|dbj|BAC49716.1| blr4451 [Bradyrhizobium japonicum USDA 110]
Length = 737
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 257/507 (50%), Gaps = 17/507 (3%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
L+ A+ ++ AL+I P +L V GK A I NP +
Sbjct: 223 RLEPALADFEAALAISPKLELALRGKAQACLVMGKTAQAMAAATALIEQNPRSEVGLALM 282
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA-HRDWGKR 165
G + + G + AI+ ++ L I PD +A + ++ +Y E D L +A RDW
Sbjct: 283 GFSHSNQGEMDAAIEYLDRALAIRPDYGDAIRGKIFLQDYRAEA-DFALQQAVRRDWWDL 341
Query: 166 FMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVV 225
+ T DP++ +V+GYV+ ++ HS + L +HD+ N+K++ Y +
Sbjct: 342 IGSKLPRRTLPKRPLDPDKQIVVGYVAAEFRQHSAGLTLLPVLRHHDHANFKIICYYSWP 401
Query: 226 KADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMAC 285
AD T F+ +W D + + + ++A ++ D +DIL++++GHT N+L + A
Sbjct: 402 GADEYTAMFK----SLADVWVDAWDLSDDELADRIQADNVDILIDVSGHTTGNRLQVFAR 457
Query: 286 QPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG 345
+PAP+Q T G+ TG+ T+DY + D + PP + E++ LP C + P +
Sbjct: 458 KPAPIQATGFGHATGTGMQTMDYVLADPVFIPPSVRHLFPEKIHDLP-CLITMEPVSDLQ 516
Query: 346 PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC----KPFCCDSV 401
P P L NG++TFG FN + KI+ ++VW+RI+ VP S++V+K P DS+
Sbjct: 517 P-SELPMLRNGYVTFGVFNRIYKISDDAIRVWSRIMREVPGSKIVLKHGLLDDPLLRDSL 575
Query: 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
RF++ G+ + L N DH+ A+ +DISLDTFP G +T ESLY GV
Sbjct: 576 IARFVAQ----GIAEENITCLGTTSRN-DHLMAFDKIDISLDTFPQNGGISTWESLYKGV 630
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P V G + G S++ VGL +A+++D YV++A + AS LA LR L +
Sbjct: 631 PVVAKLGIGASSRAGASIVAAVGLGDWVAEDDDGYVEIARKFASQPDYLAKLRAGLPAQI 690
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYC 548
+ SP + + + LE+ YR W YC
Sbjct: 691 AASPAGNVEIYTRELEAGYRQFWRDYC 717
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+ + + + A E +P +A NNL ++ D N ++A C + A++
Sbjct: 41 LHLLGMCAHDGRRLEEARELLERVIALDPRLHDAHNNLATVHFDLGNFEEARRCQERAIA 100
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPNF +L NLG G+ + A E+ E+AI P YA+A+ N G++ G I A
Sbjct: 101 LKPNFVVALTNLGNTLMHLGQYEQALELHERAIKIKPDYADAFCNRGMVEIVLGQIMRAK 160
Query: 121 DAYEQCLKIDP 131
+++++ L P
Sbjct: 161 ESFDRALLFQP 171
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LG+ D L++A E + +++ P + NNL V+ G + A
Sbjct: 35 PDHVDALHLLGMCAHDGRRLEEARELLERVIALDPRLHDAHNNLATVHFDLGNFEEARRC 94
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
E+AIA P + A NLG G A++ +E+ +KI PD +A NR
Sbjct: 95 QERAIALKPNFVVALTNLGNTLMHLGQYEQALELHERAIKIKPDYADAFCNR 146
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + ++ F+ A E A P+ A NLG ++A+E ++ A+ IK
Sbjct: 77 NLATVHFDLGNFEEARRCQERAIALKPNFVVALTNLGNTLMHLGQYEQALELHERAIKIK 136
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA 102
P+++ + N G+V V G++ A E ++A+ P +AEA
Sbjct: 137 PDYADAFCNRGMVEIVLGQIMRAKESFDRALLFQPRHAEA 176
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
L P+ +L+ LG+ +++ A E++E+ IA +P +A+NNL ++ D G+
Sbjct: 31 LKALPDHVDALHLLGMCAHDGRRLEEARELLERVIALDPRLHDAHNNLATVHFDLGNFEE 90
Query: 119 AIDAYEQCLKIDPD 132
A E+ + + P+
Sbjct: 91 ARRCQERAIALKPN 104
>gi|367471521|ref|ZP_09471127.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 285]
gi|365276113|emb|CCD83595.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 285]
Length = 739
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 261/523 (49%), Gaps = 9/523 (1%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P+ A+ G +++ D+A+ +Q AL++ P +L + ++ + A
Sbjct: 222 IKPNAAQVLAQRGRLHQQAGRFDRAMPDFQAALALDPRHEAALLGFAQLSAIKDNIAPAM 281
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
+ K + NP A+ LG + G ++ A+ +E+ L+I PD +A ++ +++
Sbjct: 282 DACRKVLEQNPHSEVAWTWLGECFCRQGDLATALQHFERALEIKPDFGDAVTAKIFLLDF 341
Query: 147 INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
+ + + R+W R ++ + +DPER L IGYVS D+ HS +
Sbjct: 342 MPDTDFAQHQAVRREWWSRIGAQIARRPTPLRDRDPERRLTIGYVSSDFRMHSAALVFLP 401
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
L +HD+ +KVV YS D T + R +W D + + ++++A + D++D
Sbjct: 402 VLRHHDHGAFKVVCYSCSPLQDGMTAQCR----AAADVWVDAWQMSDEELADRIEADEVD 457
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
ILV+L+GH+A N+L + A +PAP+QVT G TG+PT+DY D + P + E
Sbjct: 458 ILVDLSGHSAGNRLPVFARKPAPIQVTAWGSGTGTGVPTMDYFFADPVTVPEAARPLFAE 517
Query: 327 ELIRLPECFLCYTPSPEAG-PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
++ LP T P G P P L NG +TFG FN + KI+ L +WAR++ +P
Sbjct: 518 QVYDLPAVI---TTDPLQGWQPTPLPMLRNGHVTFGVFNRIDKISEPALALWARLMAELP 574
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
+SR+V+K +R ++ L G+ R+ L L + H+ ++ +D+SLD F
Sbjct: 575 DSRIVIKNGALDAPLLRDGLVARLVAHGIAEERISCLGLSTRDQ-HIAEFAAIDMSLDPF 633
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
P G +T ESL GVP + G A ++ T VGL A+++D Y+ +AL+ A
Sbjct: 634 PQNGGVSTWESLQAGVPVICKPGHSAAARAAAAINTAVGLPDWAAEDDDGYIAIALKYAR 693
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
LA LR L +++ S + + + +E YR W R+C
Sbjct: 694 QPNELAKLRAELPAMVASSAAGNVETYTRKVEEGYRLFWRRHC 736
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV + + ++A A P AEA +NLG+ +R ++A +C + A++
Sbjct: 60 LHLLGVVALDSGQLELAEQALTKAVEIEPRHAEALSNLGLALFNRKRYEEARKCQERAVA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPN +L LG G A ++AIA P YA+AY N G+ + A
Sbjct: 120 LKPNLVVALTGLGNTLMRLGLQQEAIAAHDRAIALKPDYADAYCNRGMALLTLNRNAEAN 179
Query: 121 DAYEQCLKIDP 131
++++ L + P
Sbjct: 180 HSFDRALSLTP 190
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LGV+ D L+ A + A+ I+P +++L+NLG+ + + + A +
Sbjct: 54 PEHFDALHLLGVVALDSGQLELAEQALTKAVEIEPRHAEALSNLGLALFNRKRYEEARKC 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
E+A+A P A LG G AI A+++ + + PD +A NR +A+ +N
Sbjct: 114 QERAVALKPNLVVALTGLGNTLMRLGLQQEAIAAHDRAIALKPDYADAYCNRGMALLTLN 173
Query: 149 E 149
Sbjct: 174 R 174
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
Y+ D C Q+ L++ P +L+ LGVV G+++ A + + KA+ P +AE
Sbjct: 34 YRAGRAADAQAVCGQI-LALLPEHFDALHLLGVVALDSGQLELAEQALTKAVEIEPRHAE 92
Query: 102 AYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A +NLG+ + A E+ + + P+
Sbjct: 93 ALSNLGLALFNRKRYEEARKCQERAVALKPN 123
>gi|374293909|ref|YP_005040932.1| hypothetical protein AZOLI_p30436 [Azospirillum lipoferum 4B]
gi|357427312|emb|CBS90256.1| conserved protein of unknown function; putative TPR domains
[Azospirillum lipoferum 4B]
Length = 732
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 265/501 (52%), Gaps = 29/501 (5%)
Query: 44 DRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY 103
DRD ++A + A++ +P S +L LG V ++ AAA+ A+A NP AEA+
Sbjct: 227 DRDGAERAA---RHAVASRPELSDTLLRLGEVRQRADRLGAAADAYAAALAWNPALAEAH 283
Query: 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG-HDDKLFEAHRDW 162
NL ++ + G + A + L +DP + N L + G + EAHRDW
Sbjct: 284 ANLALVRQGQGLLDAAEAGNRRALALDPGLADVRSN-LAYLQLFRPGVTAAAVLEAHRDW 342
Query: 163 GK--------RFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF----IEAPLVY 210
+ R+++ + + PL + +S D+ H F +EA L
Sbjct: 343 DRVHGAPHRGRWVKPGRGASG-AGAAAGKGPLTVAILSGDFRRHPAGLFALRTVEA-LPE 400
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
HD ++++Y+ +AD T RFR+ + W + G+ + ++A +R D+ D+L++
Sbjct: 401 HDV---RLLLYANQTEADDVTERFRKAATR----WTPVAGLTDAEIATQIRHDRPDVLID 453
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
L GH A + G+ A +PAPVQV W GY TTGL +D + D P + + E ++R
Sbjct: 454 LAGHNARGRPGVFARKPAPVQVAWSGYMATTGLAAMDALVADRHHVPDGMEGFYAERVLR 513
Query: 331 LPECFLCYTP--SPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
+P+ F+ Y P + P+ P P+L+ G + FGSFN L K+ VL WA IL +P SR
Sbjct: 514 MPDAFIAYDPPGGEDILPLTPPPSLSGGPVNFGSFNILTKLNDGVLAAWAAILGRMPGSR 573
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L++K K C + + L G+E RV ++ + DHM+ + +D++LD FP++
Sbjct: 574 LLMKTKALSCPATAALWRDRLAAAGIEPDRVTMVG-ASSSLDHMRRCASVDVALDPFPFS 632
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G+TTT E+L+MGVP VT+ G + ++ LT G++ IA + +YV+ A+ LASD
Sbjct: 633 GSTTTLETLWMGVPVVTLPGETFSSRHSLAFLTVAGVEGCIATDPADYVERAVALASDPQ 692
Query: 509 ALANLRMSLRDLMSKSPVCDG 529
LA+LR SLR M+ P+CDG
Sbjct: 693 RLADLRRSLRARMAGGPLCDG 713
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGV + + + + A+ A N A+ +NLG K L++AV ++ A+ ++P
Sbjct: 48 LGVVHLQSGQPERAVQLIRGAIQHNHRVADYHDNLGSALKALGRLEEAVAAHRQAIRLRP 107
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
+F+Q+L N+G G+++ AA +A A P YA A NLG
Sbjct: 108 DFAQALYNMGNALEALGRLEEAATAFRQAAARRPGYARARFNLG 151
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 40 VIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY 99
V + L++A Y L P + + + LGVV+ G+ + A ++I AI N
Sbjct: 16 VAHHQAGRLNEAAAMYHAVLDAMPGHADAAHLLGVVHLQSGQPERAVQLIRGAIQHNHRV 75
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A+ ++NLG + G + A+ A+ Q +++ PD
Sbjct: 76 ADYHDNLGSALKALGRLEEAVAAHRQAIRLRPD 108
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA+ + + + A Y P A+A + LGV++ ++AV+ + A+
Sbjct: 16 VAHHQAGRLNEAAAMYHAVLDAMPGHADAAHLLGVVHLQSGQPERAVQLIRGAIQHNHRV 75
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
+ +NLG G+++ A +AI P +A+A N+G
Sbjct: 76 ADYHDNLGSALKALGRLEEAVAAHRQAIRLRPDFAQALYNMG 117
>gi|365881954|ref|ZP_09421236.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 375]
gi|365289811|emb|CCD93767.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 375]
Length = 742
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 274/548 (50%), Gaps = 7/548 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ GVA + FD A+ A NP A G Y++ +A + AL+
Sbjct: 196 LFGKGVASMNLRDFDAALAALNAALAINPKAAAVIAQRGRAYQELGRFAEAEADFDAALA 255
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P ++L V V G + A +I K + NP A+ LGV G + AI
Sbjct: 256 LEPRLEEALCGKAAVTLVNGNIAPAISVINKVLEQNPNSEIAWTLLGVCAAAQGDTAAAI 315
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
D Y++ L I P+ +A ++ A++++ + ++L EA R W + + +
Sbjct: 316 DHYDRALAIRPNHEDAITKKIFALDFLPDTGVERLQEARRYWWEAIGSRLERRSLGVRNI 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+R LV+GYVS D+ HS ++ L +HD +++V YS DAKT R V +
Sbjct: 376 DPDRRLVVGYVSSDFRDHSAAFAFLPILRHHDRAKFEIVAYSCSPLKDAKTELCRSLVDR 435
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W D + ++A ++ DK+DILV+L+GH+A ++L M A +PAP+QV+ +G
Sbjct: 436 ----WVDASLWGDDRLADQIQADKVDILVDLSGHSAGHRLTMFAHKPAPIQVSAVGSVTG 491
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP +DY + D++ P E + E++ LP L P P P P L NG +TF
Sbjct: 492 TGLPVMDYLLADAVTIPAEVRHLFAEKIYDLPS--LITIEPPPTIPPSPLPMLQNGHVTF 549
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G+FN + K++ + +W++++ A P S +VVK +R R ++ G+ + R+
Sbjct: 550 GAFNRIDKMSEPAIGLWSKLMAATPGSIIVVKNHSMGDALLRDRLIARFVAHGIAADRIR 609
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
H+ ++ +DISLD FP G +T ESL MGVP VT GS + G +++
Sbjct: 610 CEGKTT-RQQHLAMFAEIDISLDPFPQNGGISTWESLQMGVPVVTKLGSGPSARAGGAIV 668
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+GL +A++++ Y+ AL S LA LR L ++S S + + +E Y
Sbjct: 669 KALGLDEWVAEDDEGYLATALNFCSRPAELAALRAELPAMVSNSAAGNNALYTQHVEKAY 728
Query: 541 RNMWHRYC 548
R W YC
Sbjct: 729 RRFWQDYC 736
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV+ + +FD A++ A +P A+A ++LGV + A ++ A++
Sbjct: 60 LHLLGVSERDCGRFDQAVLLLTRAVDIDPRAADAQSDLGVSLSRLGRHEDARARFERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPNF +L +LG + + A ++AIA P +AEAY N G+ A
Sbjct: 120 LKPNFPAALTHLGNALMSLFRFEEAIAAHDRAIALKPDHAEAYANRGMALMFTSRNGEAA 179
Query: 121 DAYEQCLKIDP 131
+++ L + P
Sbjct: 180 QNFDRALSLQP 190
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A + LGV +D D+AV A+ I P + + ++LGV + G+ + A
Sbjct: 54 PQHVGALHLLGVSERDCGRFDQAVLLLTRAVDIDPRAADAQSDLGVSLSRLGRHEDARAR 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
E+AIA P + A +LG AI A+++ + + PD A NR +A+ + +
Sbjct: 114 FERAIALKPNFPAALTHLGNALMSLFRFEEAIAAHDRAIALKPDHAEAYANRGMALMFTS 173
Query: 149 E 149
Sbjct: 174 R 174
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 49/106 (46%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LGV+ + + + A +E A P+ A +LG ++A+ + A+++K
Sbjct: 96 DLGVSLSRLGRHEDARARFERAIALKPNFPAALTHLGNALMSLFRFEEAIAAHDRAIALK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
P+ +++ N G+ + AA+ ++A++ P A GV
Sbjct: 156 PDHAEAYANRGMALMFTSRNGEAAQNFDRALSLQPRLLTALFGKGV 201
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +LG A + +F+ AI ++ A P AEA N G+ +A + + ALS
Sbjct: 128 LTHLGNALMSLFRFEEAIAAHDRAIALKPDHAEAYANRGMALMFTSRNGEAAQNFDRALS 187
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P +L GV DAA + A+A NP A G Y++ G + A
Sbjct: 188 LQPRLLTALFGKGVASMNLRDFDAALAALNAALAINPKAAAVIAQRGRAYQELGRFAEAE 247
Query: 121 DAYEQCLKIDP 131
++ L ++P
Sbjct: 248 ADFDAALALEP 258
>gi|421602601|ref|ZP_16045170.1| hypothetical protein BCCGELA001_30152 [Bradyrhizobium sp.
CCGE-LA001]
gi|404265291|gb|EJZ30402.1| hypothetical protein BCCGELA001_30152 [Bradyrhizobium sp.
CCGE-LA001]
Length = 757
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 260/544 (47%), Gaps = 7/544 (1%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G+ E+ ++ A + A P G + + L+ A+ ++ AL+I P
Sbjct: 201 GMVSMELRHYEEAAAKFVTALAIKPGAPRILAQRGRLSYELQRLEPALADFEAALAISPK 260
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+L V GK A I NP +G Y + G + AI+ +
Sbjct: 261 LELALRGKAQTCLVMGKTAQAMAAAATLIERNPRSEMGMALMGFAYSNQGDMDTAIEYLD 320
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPER 184
+ L + PD +A + ++ +Y E + W Q T DPE+
Sbjct: 321 RALDLRPDYGDAIRGKIFLQDYRAEADFVVQQAVRKSWWDAIGSRIPQRTLPKRPLDPEK 380
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
+V+GYV+ ++ HS + L HD+ ++++ Y + AD T F+ +
Sbjct: 381 RIVVGYVAAEFRQHSAGLTLLPVLRNHDHAKFEIICYYSWPGADEYTAMFK----SLADV 436
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
W D +G+ + ++A + D++DIL++++GHT N+L A +PAP+Q T G+ TG+P
Sbjct: 437 WVDAWGLSDDELADRIEADQVDILIDVSGHTTGNRLQCFARKPAPIQATGFGHATGTGMP 496
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFN 364
T+DY + D + PP + E++ LP C + P P P L NG++TFG FN
Sbjct: 497 TMDYVLADPIFIPPSVRHLFPEKIFDLP-CLITMEPVTNLQP-SELPMLRNGYVTFGVFN 554
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
+ KI+ ++VW+RI+ VP S++V+K +R ++ G+ + L
Sbjct: 555 RIYKISDDAIRVWSRIMREVPGSKIVLKHGLLDDTLLRDSLVARFVAQGIAEENITCLGT 614
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
+ DH+ A+ +DISLDTFP G +T ESLY GVP V G+ + G S++ VG
Sbjct: 615 TSRD-DHLIAFDQIDISLDTFPQNGGISTWESLYKGVPVVAKLGNGASSRAGGSIVAAVG 673
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
L +A+++D YV++A + A+ LA LR L ++ SP + + + LE+ YR W
Sbjct: 674 LGDWVAEDDDGYVEIARKFATQPGHLAKLRAELPARIAASPAGNVEIYTRELEAGYRQFW 733
Query: 545 HRYC 548
YC
Sbjct: 734 RDYC 737
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LG+ + + + A E +P +A NNL ++ D N + A C + A++
Sbjct: 61 MHLLGMCAHDGRRLEEAQQLLERVIELDPRLHDAHNNLATVHFDLGNYEDARRCQEKAIA 120
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPNF+ +L NLG G+ + A EM E+AI P YA+A N G++ G I A
Sbjct: 121 LKPNFAVALTNLGNTLMHMGRYEQALEMHERAIKLKPDYADALCNRGMVEIVLGQIMRAK 180
Query: 121 DAYEQCLKIDP 131
+++++ L P
Sbjct: 181 ESFDRALLFQP 191
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P+ +A + LG+ D L++A + + + + P + NNL V+ G + A
Sbjct: 55 PNHVDAMHLLGMCAHDGRRLEEAQQLLERVIELDPRLHDAHNNLATVHFDLGNYEDARRC 114
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
EKAIA P +A A NLG G A++ +E+ +K+ PD +A NR
Sbjct: 115 QEKAIALKPNFAVALTNLGNTLMHMGRYEQALEMHERAIKLKPDYADALCNR 166
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + ++ ++ A E A P+ A A NLG ++A+E ++ A+ +K
Sbjct: 97 NLATVHFDLGNYEDARRCQEKAIALKPNFAVALTNLGNTLMHMGRYEQALEMHERAIKLK 156
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ +L N G+V V G++ A E ++A+ P +AEA G++ + A
Sbjct: 157 PDYADALCNRGMVEIVLGQIMRAKESFDRALLFQPRHAEAIVGSGMVSMELRHYEEAAAK 216
Query: 123 YEQCLKIDPDSRNAGQNRLLA 143
+ L I P G R+LA
Sbjct: 217 FVTALAIKP-----GAPRILA 232
>gi|365880803|ref|ZP_09420149.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 375]
gi|365291082|emb|CCD92680.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 375]
Length = 739
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/494 (31%), Positives = 257/494 (52%), Gaps = 9/494 (1%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
L++ P +L V + ++ A ++ + NP A LG G +
Sbjct: 254 LAVDPGLETALLGKAHVCVLTERIAPAMLACKRVLEQNPASEVALIWLGACLAKQGDTAG 313
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA-HRDWGKRFMRLYSQYTSWD 177
AI +++ L+I PD +A ++ A+++ G D + +A R+W +R +
Sbjct: 314 AIQHFDRALEIKPDFEDAILKKIFALDFY-PGADVAVHQAVRREWWERIGARIPRRQLGA 372
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
+DP+R + +GYVS D+ +HS + L +HD+ +KVV YS + D+ T ++
Sbjct: 373 VDRDPDRRITLGYVSSDFRSHSAALTFLPVLRHHDHDAFKVVCYSCSPQVDSVT----DQ 428
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
+W D + + ++A ++ D++DILV+L+GH+A N+L + A +PAP+QVT G
Sbjct: 429 CKAAADVWVDATQLSDDELADRIQADQVDILVDLSGHSAGNRLTVFARKPAPIQVTAWGN 488
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
TGLPT+DY D +A P + E++ LP + P P+A P P P L NG
Sbjct: 489 ATGTGLPTMDYFFADPVAVPHAVRPLFAEQVYDLP-ALITTDPLPDATPT-PLPMLRNGH 546
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+TFG FN + KI+ +VL VW +L A+P++R+V+K +R ++ G+E
Sbjct: 547 VTFGVFNRIDKISDQVLDVWTALLRALPSARIVIKNGALDDAFLRDGLIARFTAQGIEEG 606
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ L +H+ A++ +DISLD FP G +T ESL GVP V G+ A G
Sbjct: 607 RLTCLGSST-RQEHIAAFAGIDISLDPFPQNGGVSTWESLQAGVPVVAKLGNSAASRAGG 665
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+++ +GL +A+++D Y+ +AL+ A+D LA +R L ++ S + + +A +E
Sbjct: 666 AIVKAIGLDDWVAEDDDGYIAIALKHAADPAELARVRAELPTRVANSAAGNVRTYARKVE 725
Query: 538 STYRNMWHRYCKGD 551
YR W YC D
Sbjct: 726 EGYRQFWRAYCAAD 739
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG + + + D+A A P AEA NLG++ ++A + A++
Sbjct: 60 LHLLGASALDSGRLDLAEQALTRAVALEPRNAEAQANLGLVLFSMKRYEEARAAQERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KPNF+ +L +LG A EM ++AIA P +A+AY N G+
Sbjct: 120 LKPNFATALTSLGNTLMNMQLFAPAIEMHDRAIALKPDFADAYCNRGM 167
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P EA + LG D LD A + A++++P +++ NLG+V + + A
Sbjct: 54 PDHFEALHLLGASALDSGRLDLAEQALTRAVALEPRNAEAQANLGLVLFSMKRYEEARAA 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
E+AIA P +A A +LG + + AI+ +++ + + PD +A NR
Sbjct: 114 QERAIALKPNFATALTSLGNTLMNMQLFAPAIEMHDRAIALKPDFADAYCNR 165
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ M +++ A E A P+ A A +LG + A+E + A+++K
Sbjct: 96 NLGLVLFSMKRYEEARAAQERAIALKPNFATALTSLGNTLMNMQLFAPAIEMHDRAIALK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
P+F+ + N G+ + + + A + ++A+A P + +A G++
Sbjct: 156 PDFADAYCNRGMTQLLLQRNEEAKQSFDRALALAPRHMQATFGKGLV 202
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE 101
Y+ + D C Q+ L++ P+ ++L+ LG G++D A + + +A+A P AE
Sbjct: 34 YRAGRHADAQAVCGQV-LALVPDHFEALHLLGASALDSGRLDLAEQALTRAVALEPRNAE 92
Query: 102 AYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A NLG++ A A E+ + + P+
Sbjct: 93 AQANLGLVLFSMKRYEEARAAQERAIALKPN 123
>gi|288549794|ref|ZP_05968179.2| sulfotransferase [Enterobacter cancerogenus ATCC 35316]
gi|288317412|gb|EFC56350.1| sulfotransferase [Enterobacter cancerogenus ATCC 35316]
Length = 1390
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 264/511 (51%), Gaps = 9/511 (1%)
Query: 46 DNLDKAVECYQMALS-IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN-PTYAEAY 103
D L +A E A+S I + ++ L L + K A+ + K + A P +
Sbjct: 101 DRLSEAEEYLTDAISRIDKSAARPLRLLHATVLQKAKKYEEAQALYKQLTAEMPGNWLYW 160
Query: 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWG 163
NNLG++ +D + +AY+ ++ D+ NR++ +Y E + + + + W
Sbjct: 161 NNLGMVQQDLSQFNEMDEAYQHSCEVSKDNPTPYFNRIVGAHYNPERSAEDILKLCKSWQ 220
Query: 164 KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA 223
+ F + N K P++ L IG VS H V I L + + YS
Sbjct: 221 ENFPPRSVKRAVAKN-KAPDKCLRIGLVSDGLRLHPVGQMIVMGLEHIPASQIEFYAYST 279
Query: 224 VVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMM 283
+ D T R + + WR + I ++ +VRED+IDIL +L G+ AN+++
Sbjct: 280 NYQEDHLTHRLK----RMCASWRVVEHIGAAELDKIVREDEIDILFDLCGYNANSRMQTF 335
Query: 284 ACQPAPVQVTWIG-YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP 342
QPAP+Q+ W+G ++TGL +DY ++D++ P + E+LIR+P+ ++CY P
Sbjct: 336 QLQPAPIQIKWVGGLISSTGLAGMDYLLSDAIETPEWADSLYTEKLIRMPDDYICYDPPF 395
Query: 343 EAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR 402
V P T G+ TFG FNN +KI +L WA +L +VP+SRL +K F ++++
Sbjct: 396 YLPAVSEMPVKTKGYFTFGCFNNASKINDFLLNQWAVLLHSVPDSRLFLKSFNFDNENLK 455
Query: 403 HRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVP 462
R L+TLE G+ RV + + + + + Y+ +DI+LD +PY+G TTCE+L MGVP
Sbjct: 456 ERVLTTLEGHGIARERVRIEGMAP-HQELLACYNEVDIALDPWPYSGGLTTCEALAMGVP 514
Query: 463 CVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMS 522
VT+ G A S L GL+ L+A + ++ + + L D+ +L +R ++R+++
Sbjct: 515 VVTLPGPTFAGRHSASHLVNAGLQELVASDWQNFIDITVGLTQDLNSLEIIRGNMREILL 574
Query: 523 KSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
SPVCDGQ FA R +W RYC+G P
Sbjct: 575 ASPVCDGQRFAKHFSQAMRAVWQRYCEGKKP 605
>gi|167590317|ref|ZP_02382705.1| TPR repeat protein [Burkholderia ubonensis Bu]
Length = 595
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 257/513 (50%), Gaps = 9/513 (1%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
NLG + + + A EC+++A ++P++ + NNLG + G AA E KAI+ N
Sbjct: 79 NLGNVMQADNRHCAAAECFRLATELRPDYVDAYNNLGNAQRLAGDARAAVESFCKAISLN 138
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE-GHDDKL 155
A+AYNNL D I A++AY + + P+ N L A +Y + HD L
Sbjct: 139 ADNAKAYNNLANALFDLNEIPAALEAYRHAIALHPELPEPRSNLLFASHYGDAFDHDAYL 198
Query: 156 FEAHRDWGKRFMRLYSQYTSW--DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
EA R + + R +T W D T RPL +G VS D +H V YFIE+ L + D
Sbjct: 199 AEAAR-YDELVTRRAKPWTDWLVDLTARVGRPLKVGIVSGDLKSHPVGYFIESMLKHLDA 257
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
++ Y D T R + W + G+ ++ AA +R D+ID+L++ +G
Sbjct: 258 NRIEMHAYPTRDVEDDVTARIKPTF----STWTCLAGLSDEAAAARIRADRIDVLLDASG 313
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
HT N+L + A + AP+Q +W GY +TG+ IDY I D PP E LP+
Sbjct: 314 HTIYNRLPLFAWKAAPLQASWPGYFASTGVRAIDYVIGDRHVLPPAEAAHFTERPWHLPD 373
Query: 334 CFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC 393
+LC+TP +A P L NG TFG F LAK+T +V+ VW+R+L +V ++L VK
Sbjct: 374 SYLCFTPPADAVDAGALPMLANGHPTFGYFGKLAKLTDRVVAVWSRVLQSVAGAKLFVKA 433
Query: 394 KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTT 453
+ + + G+++ R+ +L +++ AY +D+ L FPY G TTT
Sbjct: 434 EHLDDPREQQALAARFAAHGIDAQRL-ILEGRSPRAEYLAAYRRVDLMLSPFPYPGGTTT 492
Query: 454 CESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANL 513
E+L+MGVP + G ++ SLL L IA ++D YV A+ + LA L
Sbjct: 493 AEALWMGVPVLCRRGDRFLSHIAESLLHAARLPEWIADDDDAYVAKAVAQTAKPAELAVL 552
Query: 514 RMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
R +LR + SP+CD FA E MW R
Sbjct: 553 RTTLRAQVLASPLCDAPRFARNFEDALHAMWAR 585
>gi|156933472|ref|YP_001437388.1| hypothetical protein ESA_01290 [Cronobacter sakazakii ATCC BAA-894]
gi|156531726|gb|ABU76552.1| hypothetical protein ESA_01290 [Cronobacter sakazakii ATCC BAA-894]
Length = 1116
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 259/499 (51%), Gaps = 35/499 (7%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N+LG +Y +G M A + +A P +GV+ D + A E+ L++
Sbjct: 631 NSLGTLYHARGDMTLAEKCAREAFRFQPRNPRYLAMMGVVLSDNQKLDEARYFLEKSLEL 690
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWD----NTKDPERP 185
P+ + + L + + N +L HRD+G+R + Y++ + + N KDP R
Sbjct: 691 SPEDFDCFTSLLFVLTHDNRVSAQELLAKHRDYGER-VTAYAERLALNLPLNNEKDPHRK 749
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +G+VS D TH VS F+ D +++V Y+A D T R + +W
Sbjct: 750 LRVGFVSGDLRTHPVSNFLLPFWESFDRTQFELVGYNAAPMHDEVTDHLRAGAV----LW 805
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
RD Y + ++++A + +D +DIL++L+GHT +L M A +PAP+Q+TWIGYP TTG+P
Sbjct: 806 RDAYQLSDRELARQINDDGVDILIDLSGHTTWTRLPMFALRPAPLQMTWIGYPGTTGVPA 865
Query: 306 IDYR-ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFN 364
+DYR ++ +LA PP ++ E+++ +P + P P++ V P PAL NG +TF SFN
Sbjct: 866 MDYRLLSSTLASPPGLAEQFTEQILWVP-MRKIFEPHPQSPDVNPLPALRNGHLTFASFN 924
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD----SVRHRFLSTL----EQLGLES 416
KI +VL++WA+IL P+++L++ F D ++ R L+ EQL +
Sbjct: 925 RPKKINDEVLELWAKILVREPSAKLLMG---FMADDEMIAMMTRRLTHFGARPEQLIFRT 981
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R L+ ++++ + +DI LD FPY G TTT +MGVP +T+ G A G
Sbjct: 982 -RTGLI-------EYLEYHHHIDILLDAFPYTGGTTTNHGAWMGVPTLTLCGETMAGRQG 1033
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV--CDGQNFAL 534
V + GL +A ++ +YV+ AL L +R+S+R S+ P DG A
Sbjct: 1034 VETMNGYGLPEFVANDKADYVEKALSWQGRFEELNAIRLSMR---SRIPTNNADGFRVAE 1090
Query: 535 GLESTYRNMWHRYCKGDVP 553
E R W YC G+ P
Sbjct: 1091 TFEKGLREAWKIYCTGEAP 1109
>gi|449307797|ref|YP_007440153.1| hypothetical protein CSSP291_06335 [Cronobacter sakazakii SP291]
gi|449097830|gb|AGE85864.1| hypothetical protein CSSP291_06335 [Cronobacter sakazakii SP291]
Length = 1116
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 259/498 (52%), Gaps = 33/498 (6%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N+LG +Y +G M A + +A P +GV+ D + A E+ L++
Sbjct: 631 NSLGTLYHARGDMTLAEKCAREAFRFQPRNPRYLAMMGVVLSDNQKLDEARYFLEKSLEL 690
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR---FMRLYSQYTSWDNTKDPERPL 186
P+ + + L + + N +L HRD+G+R + R + +N KDP R L
Sbjct: 691 APEDFDCFTSLLFVLTHDNRISAQELLAKHRDYGERVTAWARRCALDLPLNNEKDPHRKL 750
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IG++S D TH VS F+ D +++V Y+A D T R + +WR
Sbjct: 751 RIGFISGDLRTHPVSNFLLPFWESFDRTQFELVGYNAAPMHDEVTDHLRAGTV----LWR 806
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
D+ + ++++A + +D +DIL++L+GHT +L M A +PAP+Q+TWIGYP TTG+P +
Sbjct: 807 DVSQLSDRELARQINDDGVDILIDLSGHTTWTRLPMFALRPAPLQMTWIGYPGTTGVPAM 866
Query: 307 DYR-ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNN 365
DYR ++ +LA PP +++ E+++ +P + P P++ V P PAL NG++TF SFN
Sbjct: 867 DYRLLSSTLASPPGLEEQFTEQILWVP-MRKIFEPHPQSPDVNPLPALRNGYLTFASFNR 925
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD----SVRHRFLSTL----EQLGLESL 417
K+ +VL++WA+IL P ++L++ F D ++ R L+ EQL + +
Sbjct: 926 PKKVNDEVLELWAQILVREPGAKLLMG---FMADDEMIAMMTRRLTHFGARPEQL-IFKM 981
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R L+ ++++ + +DI LD FPY G TTT +MGVP +T+ G A GV
Sbjct: 982 RTGLI-------EYLEYHHHIDILLDAFPYTGGTTTNHGAWMGVPTLTLCGETMAGRQGV 1034
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV--CDGQNFALG 535
++ GL +A ++ +YV AL L +R+S+R S+ P DG A
Sbjct: 1035 DIMNGYGLPEFVANDKADYVDKALSWQGRFEELNAIRLSMR---SRIPTDNADGFRVADT 1091
Query: 536 LESTYRNMWHRYCKGDVP 553
E R W YC G+ P
Sbjct: 1092 FEKGLREAWKIYCTGEAP 1109
>gi|377819539|ref|YP_004975910.1| hypothetical protein BYI23_A000950 [Burkholderia sp. YI23]
gi|357934374|gb|AET87933.1| TPR repeat-containing protein [Burkholderia sp. YI23]
Length = 767
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 261/503 (51%), Gaps = 11/503 (2%)
Query: 52 VECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYR 111
VEC + + + + +++ LG+ GK + AA +AI PT + LG+L
Sbjct: 258 VECRSI-IEARADVAEAHRLLGIALAGIGKFEEAAASCRRAIELAPTSPATHGTLGMLML 316
Query: 112 DAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS 171
+AG ++ A + + ++ D + N L ++ + + L+ H + +R
Sbjct: 317 EAGRMNEAAECLRNAVDLNADDVASHSNLLFSLVHRIDIDQKSLYMEHLRFAERHEASIE 376
Query: 172 QYTSWDNT-KDPERPLVIGYVSPDYFTHSV-SYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
+ N + +R L IG+VS D F H+V SY + + + ++VVY DA
Sbjct: 377 RVPLNPNIDRSTDRTLRIGFVSGDLFNHAVTSYVLPVLKSLANDPSLQIVVYQNHTVEDA 436
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
T R + + WR + + + ++A+ ++ D IDILV+L+GHT N+L +PAP
Sbjct: 437 HTQRLQSCASQ----WRRVARLSDDRLASTIQADGIDILVDLSGHTGRNRLLTFVRKPAP 492
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPE-TKQKHVEELIRLPECFLCYTPSPEAGPVC 348
VQ TWIGYP TTGL +DY D P E ++ E L+ LP P PV
Sbjct: 493 VQATWIGYPATTGLAAMDYYFADRFCAPFELASEQFREALVHLPAIAPFIAPE-NCPPVN 551
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD-SVRHRFLS 407
PAL NG++TFGSFN + K+ P+V+ +WA+IL A+P+S++++ D S +
Sbjct: 552 ILPALHNGYVTFGSFNRINKVRPEVIALWAKILHAMPSSKMLIGAIRREGDRSDEAHYAD 611
Query: 408 TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
+ G+ R+ +P ++Q + +D+ LD FP++ +TTT +L+MGVP +TMA
Sbjct: 612 QFAKQGISRDRLMFVPRSA-TAVYLQQHHQVDLCLDAFPFSASTTTLNALWMGVPTLTMA 670
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G+ + L+ VGL+ + K++D++VQ AL + SD+ AL LR+ LR+ +S
Sbjct: 671 GNSLVSRGATTWLSHVGLESFVTKDKDDFVQSALSIVSDLPALNELRLGLRERCIQSAAF 730
Query: 528 DGQNFALGLESTYRNMWHRYCKG 550
A G+ +R MW R+C+G
Sbjct: 731 QPDVVAQGVARAFRTMWQRWCEG 753
>gi|115523543|ref|YP_780454.1| hypothetical protein RPE_1524 [Rhodopseudomonas palustris BisA53]
gi|115517490|gb|ABJ05474.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53]
Length = 732
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/564 (29%), Positives = 268/564 (47%), Gaps = 18/564 (3%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G + ++ ++D A+ Y A +P A N +K+ LD A+ Y ALSI
Sbjct: 178 GNSLQKLARYDEALESYAKAIAIDPLHDMAYMNRASTFKELKRLDDALASYDRALSIGKR 237
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
++ + + + A + + + P LG G AI Y
Sbjct: 238 PVEAGICRAEILLNKKNVKDAMQTVTAVLNIEPNSVSGLTLLGNCMASLGDAETAIALYS 297
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW----GKRFMRLYSQYTSWDNTK 180
+ L I P A +++ ++++ + + A +W G + + DN +
Sbjct: 298 RALAIAPSYEPAISSKIFSLDFCADASFESQQAARSNWWDCIGANIYKACAAPV--DNDR 355
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
D R LVIGYVS D+ HS ++ L +HD Q ++VV YS VV D T F+ K
Sbjct: 356 DLNRRLVIGYVSADFRHHSAAFSFRPVLAHHDKQRFEVVCYSGVVVPDETTHGFQAIADK 415
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
WRD+ + ++A ++ DK+DILV+L+GH+A N+L + A + APVQ+T G+
Sbjct: 416 ----WRDMSQWTDNQLAQAIKADKVDILVDLSGHSAGNRLRVFARKVAPVQITAWGHSTG 471
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLPTIDY D +A P E + + E + LP + P P P NG++T+
Sbjct: 472 TGLPTIDYLFGDPIAIPQEVRHFYAETIYDLP-AIVTIEPPPSQWRTTELPLDRNGYLTY 530
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFN ++KI+ + LQVW+RI+ P SRLV+K +VR L+ G+ R+
Sbjct: 531 GSFNRVSKISDQALQVWSRIMSGSPTSRLVIKDHTIEDPAVRQTLLAKFAANGVGPERIT 590
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LL DH+ +D+ LD FP G ++ E+LYMGVP VT G +G +++
Sbjct: 591 LLGST-SRQDHLITLQQIDLCLDPFPQCGGVSSWEALYMGVPVVTKMGHTATGRLGAAIM 649
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+ G+ I ++ Y+Q+ D L ++R L + + C + +E Y
Sbjct: 650 STAGIPDFIGNDDAHYIQIGQN--PDPERLRSIRQGLPGFIYER--CGPVAYTHAVEDAY 705
Query: 541 RNMWHRYCKGDVPSLKRMEMLQQQ 564
R MW YC+ P+ +M+ +Q+
Sbjct: 706 RAMWKTYCES--PAWTKMQFGKQR 727
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+F+ A+ + A +P A +N G + L+ AV AL++ PN + S N+
Sbjct: 118 RFEEALKSCDKAIALDPKLVLAHHNRGHTLLHLERLEDAVASLDDALALDPNRADSWNDR 177
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + D A E KAIA +P + AY N +++ + A+ +Y++ L I
Sbjct: 178 GNSLQKLARYDEALESYAKAIAIDPLHDMAYMNRASTFKELKRLDDALASYDRALSIGKR 237
Query: 133 SRNAG 137
AG
Sbjct: 238 PVEAG 242
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 58/117 (49%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A +P+ A A +++ + D + ++A++ A+++ P + +N G +++
Sbjct: 95 ALLIDPNSAPAHSDMANMMIDANRFEEALKSCDKAIALDPKLVLAHHNRGHTLLHLERLE 154
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
A ++ A+A +P A+++N+ G + A+++Y + + IDP A NR
Sbjct: 155 DAVASLDDALALDPNRADSWNDRGNSLQKLARYDEALESYAKAIAIDPLHDMAYMNR 211
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
LD+A Y+ L PN Q+L+ + G ++ +++A+ +P A A++++
Sbjct: 50 QLDEAKSAYKKVLKKAPNNFQALHFYALAEHQSGHLETGIRNLKRALLIDPNSAPAHSDM 109
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+ DA A+ + ++ + +DP A NR
Sbjct: 110 ANMMIDANRFEEALKSCDKAIALDPKLVLAHHNR 143
>gi|429082643|ref|ZP_19145705.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter condimenti 1330]
gi|426548621|emb|CCJ71746.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter condimenti 1330]
Length = 1116
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 256/505 (50%), Gaps = 47/505 (9%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N+LG +Y +G M A + +A P +GV+ D + A E+ L++
Sbjct: 631 NSLGSLYHARGDMTLAEKCAREAFRFQPRNPRYLAMMGVVLSDNQKLDEARYFLEKSLEL 690
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW----------DNT 179
P+ + + L M + N+ +L HR++G+R TSW +N
Sbjct: 691 APNDFDCFTSLLFVMTHDNKVSAQELLAKHREYGERV-------TSWAARGALTLPLNNV 743
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
KDP+R L IG+VS D TH VS F+ D +++V Y+A D T R + +
Sbjct: 744 KDPQRKLRIGFVSGDLRTHPVSNFLLPFWESFDRTRFELVGYNAAPMHDELTDRLKAGAV 803
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+WRD + ++++A + +D +DIL++L+GHT +L M A +PAP+Q+TWIGYP
Sbjct: 804 ----LWRDAAQLSDRELARQINDDGVDILIDLSGHTTWTRLPMFALRPAPLQMTWIGYPG 859
Query: 300 TTGLPTIDYR-ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
TTG+P +DYR ++ +LA PP ++ E+++ +P + P P + V P PAL NG +
Sbjct: 860 TTGVPAMDYRLLSSTLASPPGLAEQFTEQILWVP-MRKIFEPHPHSPEVNPLPALRNGHL 918
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS------VRH--RFLSTLE 410
TF SFN K+ +V+++WA+IL P+++L++ F D R RF + E
Sbjct: 919 TFASFNRPKKVNDEVIELWAQILVREPSAKLLMG---FMADDEMIAMMTRRLTRFGARPE 975
Query: 411 QLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSV 470
QL + +R L+ + +H +DI LD FPY G TTT +MGVP +T+ G
Sbjct: 976 QL-IFKMRTGLMGYLEYHHH-------IDILLDAFPYTGGTTTNHGAWMGVPTLTLCGET 1027
Query: 471 HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV--CD 528
A GV ++ GL +A ++ +YV AL L +R+S+R S+ P D
Sbjct: 1028 MAGRQGVDIMNGYGLPEFVANDKADYVDKALSWQGRFEELNAIRLSMR---SRIPTDNAD 1084
Query: 529 GQNFALGLESTYRNMWHRYCKGDVP 553
G A E R W YC G+ P
Sbjct: 1085 GFRVAETFEKGLREAWKLYCTGEAP 1109
>gi|186477738|ref|YP_001859208.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
gi|184194197|gb|ACC72162.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
Length = 824
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 259/524 (49%), Gaps = 18/524 (3%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AE LG + D+A++ Y ++ + + ++ +NL V Y + A K
Sbjct: 310 AEGYATLGNAWYGLYRYDEAIDSYLRSVELADDDAEVHHNLAVAYLKTERPAQALHYARK 369
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
A+ + + NLG + R G + A ++Y ++ PD+ A L ++
Sbjct: 370 ALELKDGSSRMHINLGDVLRSLGELEAAANSYRSAIERSPDADVAHTALLFCEASMSRRP 429
Query: 152 DDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE--RPLVIGYVSPDYFTHSVSYFIEAPLV 209
+ +GKR + + T + +T+ P RPL +G+VS D TH V F E+ L
Sbjct: 430 VEDYLADAVYFGKR---MAANVTPFTHTRMPRGSRPLRVGFVSGDLRTHPVGIFTESVLR 486
Query: 210 YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILV 269
+ D +++ Y D T R + G W + + + A + +D+IDIL+
Sbjct: 487 HIDPSRVELIAYQTNDVEDDTTQRLKPLF----GEWTQLSKLSREAAAKRIFDDRIDILL 542
Query: 270 ELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELI 329
+++GHTA N+L + A +PAPVQVTW+G+ +TG+ IDY + D PPE +E+
Sbjct: 543 DMSGHTAFNRLAVFAMKPAPVQVTWLGFFASTGIEQIDYVLGDRYVLPPEEAHHFIEKPW 602
Query: 330 RLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL 389
LP+ +LC TP V P L NGF+TFG LAK+T VL +WAR+L VP SRL
Sbjct: 603 HLPDGYLCMTPPAHDVAVGALPMLANGFVTFGYLGKLAKVTDDVLDLWARVLREVPGSRL 662
Query: 390 VVKC----KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
++K + D+ R RF GL++ R+ LL ++ + Y +DI L F
Sbjct: 663 LIKAHELDRKHAVDATRRRFAGR----GLDAERL-LLEGGSKRDEYFKTYHRVDIVLSPF 717
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
PY G TTT E+L+MGVP V M G ++ S+L G + + Y+ +A LA+
Sbjct: 718 PYPGGTTTAEALWMGVPVVAMKGDRFLGHICESVLQSAGFGDWVTGDAQGYIAIARALAA 777
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
D ALA LR LR+ + SP+CD Q FA E MW Y +
Sbjct: 778 DRDALATLRAGLREHVLASPMCDAQRFARNFEDALDGMWRVYER 821
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + AI Y A +P AEA NNLG ++ D A+ A+ ++
Sbjct: 87 NLGNALREHGQLKQAIDGYREAVTLDPGYAEAHNNLGNALREDRQPDAAMRSCAHAIELR 146
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+++ NNLG G++D AA KAI+ YA+A+NNLG + G AID+
Sbjct: 147 PGFAEAYNNLGNALKDLGELDNAALAYRKAISFRQNYADAHNNLGNALMEQGKYDEAIDS 206
Query: 123 YEQCLKIDPDS---RNAGQNRLLAMNYINEG 150
Y + +D + N+ LLA ++E
Sbjct: 207 YRSAIALDANRALMHNSLGTLLLARGELDEA 237
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 66/130 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + D A+ A P AEA NNLG KD LD A Y+ A+S +
Sbjct: 121 NLGNALREDRQPDAAMRSCAHAIELRPGFAEAYNNLGNALKDLGELDNAALAYRKAISFR 180
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N++ + NNLG QGK D A + AIA + A +N+LG L G + A +
Sbjct: 181 QNYADAHNNLGNALMEQGKYDEAIDSYRSAIALDANRALMHNSLGTLLLARGELDEAAAS 240
Query: 123 YEQCLKIDPD 132
++ +++DP+
Sbjct: 241 LQRAVELDPN 250
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 69/127 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A ++ + D A + Y A F + A+A NNLG ++ D+A++ Y+ A+++
Sbjct: 155 NLGNALKDLGELDNAALAYRKAISFRQNYADAHNNLGNALMEQGKYDEAIDSYRSAIALD 214
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N + N+LG + +G++D AA +++A+ +P +NNL RD G + A
Sbjct: 215 ANRALMHNSLGTLLLARGELDEAAASLQRAVELDPNRPGVHNNLANTLRDMGRLEEARTH 274
Query: 123 YEQCLKI 129
Y + L++
Sbjct: 275 YSRALQL 281
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+ ++ ++D I + P+ A NNLG ++ L +A++ Y+ A++
Sbjct: 52 LHFLGLLACQIQQYDAGITLMRQSIAILPN-AIYHNNLGNALREHGQLKQAIDGYREAVT 110
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P ++++ NNLG + DAA AI P +AEAYNNLG +D G + A
Sbjct: 111 LDPGYAEAHNNLGNALREDRQPDAAMRSCAHAIELRPGFAEAYNNLGNALKDLGELDNAA 170
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
AY + + + +A N L + +G D+ +++R
Sbjct: 171 LAYRKAISFRQNYADAHNN--LGNALMEQGKYDEAIDSYR 208
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 26/169 (15%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E K+D AI Y A + + A N+LG + R LD+A Q A+ +
Sbjct: 189 NLGNALMEQGKYDEAIDSYRSAIALDANRALMHNSLGTLLLARGELDEAAASLQRAVELD 248
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI-------------AANP-----------T 98
PN NNL G+++ A +A+ AA P T
Sbjct: 249 PNRPGVHNNLANTLRDMGRLEEARTHYSRALQLAQAIIDSYRGGAAAPFAQVRSTEPRLT 308
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
AE Y LG + AID+Y + +++ D N LA+ Y+
Sbjct: 309 LAEGYATLGNAWYGLYRYDEAIDSYLRSVELADDDAEVHHN--LAVAYL 355
>gi|401565711|ref|ZP_10806533.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC6]
gi|400185563|gb|EJO19791.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC6]
Length = 1079
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 180/496 (36%), Positives = 251/496 (50%), Gaps = 36/496 (7%)
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAE----AYNNLGVLYRDAGSISLAIDAYEQCLKID 130
+Y ++G AA E++E I A P AE YN G R G + A++ YE+
Sbjct: 81 IYLLEGARCAALEVLEPLIDA-PMPAEIAEKVYNLAGQCARFLGRAAEAVNFYERARDAA 139
Query: 131 PDSRNAGQNRLLAMNYINEGHDDKLFEAH---------RDWGKRFMRLYSQYTSWDNTKD 181
PD LA+ +N + LF H R + + L+SQ +T+
Sbjct: 140 PD---------LALKALNA--SNVLFNRHYLPATLAEDRAAAESYGALFSQIHQLSHTEH 188
Query: 182 -PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
R L IGY+SPD H V F A + D+ Y+V VY A+ DA T EKV
Sbjct: 189 RAGRRLRIGYLSPDVREHVVLSFSYALMTVLDHVRYEVTVY-ALNAEDAYT----EKVKA 243
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+R++ + ++ A ++ DKIDILV+L GHTA L ++A +PAPVQ++ IGY +
Sbjct: 244 SVEHFRNLARLSAEEAAQVICRDKIDILVDLAGHTAGRTLPILAYRPAPVQISGIGYFAS 303
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGL T+DY + D + E ++ VEEL+ LP+ C+ P A V PA I F
Sbjct: 304 TGLSTVDYFLADPILAAGEAEKGFVEELLVLPQTHFCWQPLHTAPAVDHAPAAGRSII-F 362
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNN K+ +VL+VWA IL V SRL++K F R L +E G+ VD
Sbjct: 363 GSFNNFTKLNDEVLRVWAEILRHVEGSRLLLKTDVFSYADARAEILQRIEAAGIPLACVD 422
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ D++ AY+ MDI+LD FPY G TTC++LYMGVP VTM G G SL+
Sbjct: 423 TEGA---SRDYLAAYNRMDIALDPFPYPGGGTTCDALYMGVPVVTMRGEGLGSRFGASLV 479
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+G LIA+ +EY+ A+ LA D L L LR +M SPV D + + + Y
Sbjct: 480 ENIGAGALIAQTTEEYIDRAVSLARDTELLDALHAGLRGMMETSPVMDAAAYGSAVGTAY 539
Query: 541 RNMWHRYCKGDVPSLK 556
+W Y + P LK
Sbjct: 540 EQVWAAYAE-RAPLLK 554
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 248/479 (51%), Gaps = 30/479 (6%)
Query: 79 QGKMDAAAEMIEKAIAANPT-YAEAYNNL--GVLYRDAGSISLAIDAYEQCLKIDPDSRN 135
QG + A E+ E+ +A T + L + YR G + A + Y+ +P
Sbjct: 614 QGDLPRAMELAEEYLATGRTDLRHEFMRLRAAMAYR-VGDVR-AAEYYKCAYDEEPSDMG 671
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRL--YSQYTSWDNTKDPERPLVIGYVSP 193
+ LLA N + D+LF AH +G F + Y+ + + K + IGY+SP
Sbjct: 672 LYSSFLLAQN-AQDVDADELFRAHCAYGTLFADIPCYTYAAPYQHGK-----IRIGYISP 725
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDE 253
D+ + + +F++ L +++ +++V VYS D T R V +WRD+
Sbjct: 726 DFRRNVLQHFVQPLLTAYNHAHFEVYVYSTAENPDEVTAALRPHVT----VWRDLAEEPP 781
Query: 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS 313
+K+AA + D+ID+LV+L GH + L ++A +PAPVQ+ +GY T+GL T+DY +TD
Sbjct: 782 EKIAARIHADEIDVLVDLAGHASGGALPVLARRPAPVQMMGLGYTATSGLETVDYFLTDG 841
Query: 314 LADPPETKQKH--VEELIRLPECFLCYTPSPEAGPVCPT--PALTNGFITFGSFNNLAKI 369
DP +H E+LIRLP F+ P AG PT PA G I FG FN K
Sbjct: 842 FCDPVGGVSEHYFTEKLIRLPSQFVYV---PRAGLPAPTGTPARQRGHILFGVFNQYRKF 898
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429
T ++L +W I+ +P S L++K + F ++ LE+LG + RV L P
Sbjct: 899 TDEMLLLWREIMERMPTSELLLKSQIFFAPAMVEAVRMRLERLGFDFTRVILEPA---TT 955
Query: 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLI 489
D+M+ Y +DI+LDT+P+ G TTC++LYMGVP VT+ G + +LLT VGL+ L
Sbjct: 956 DYMERYLDVDIALDTYPWPGGGTTCDALYMGVPVVTLYGERRSTRFSYALLTHVGLEELA 1015
Query: 490 AKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM---WH 545
++ +YV A+ LA D+ L L + LR M S + D + + LE Y N WH
Sbjct: 1016 VQSSADYVACAVTLAGDLDRLDQLHVGLRARMEGSAIMDQEGYMRALERAYVNAPKDWH 1074
>gi|422343493|ref|ZP_16424421.1| hypothetical protein HMPREF9432_00481 [Selenomonas noxia F0398]
gi|355378800|gb|EHG25980.1| hypothetical protein HMPREF9432_00481 [Selenomonas noxia F0398]
Length = 1079
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 251/475 (52%), Gaps = 23/475 (4%)
Query: 79 QGKMDAAAEMIEKAIAANPT-YAEAYNNL--GVLYRDAGSISLAIDAYEQCLKIDPDSRN 135
QG + A + E +AA T A+ L V YR G + A + Y + +P +
Sbjct: 615 QGDLPRAMALAEAYLAARRTPLRHAFMRLRAAVAYR-MGDVR-AAEFYRSAYEEEPSDPS 672
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPER--PLVIGYVSP 193
+ LLA N E D+LF AH + K F + ++P R + +GY+SP
Sbjct: 673 LYSSFLLAQN-AQEADMDELFRAHCAYEKIF-----EDVPRCAKREPYRHKKIRVGYISP 726
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDE 253
D+ + + +FI+ L +D ++ V YS + D T R WRD+ G
Sbjct: 727 DFRRNVMLHFIQPMLTMYDRAHFDVYAYSLTAQPDEATAALR----PHAAAWRDLGGAAP 782
Query: 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS 313
+++AA ++ED+IDILV+L GH A L ++A +PAPVQ+T +GY T+GL +DY +TD+
Sbjct: 783 EEIAACIQEDEIDILVDLAGHAAGGALPVLARRPAPVQMTGLGYTATSGLRAVDYFLTDA 842
Query: 314 LADP--PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITP 371
+ DP +++ E+LIRLP F+ Y P TPA + G+ITFG FN K T
Sbjct: 843 VCDPVGGTSERYFTEKLIRLPSQFV-YVPRAGLPAAAETPARSRGYITFGVFNQYRKYTD 901
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
+L VW I+ VP +RL++K + F ++ + +++LG + RV L P D+
Sbjct: 902 AMLTVWREIMERVPTARLLIKSQVFFSSAMTETARARMKRLGFDLRRVALEPA---TTDY 958
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
MQ Y +DI+LDT+P+ G TTC++LYMGVP VTM G+ + +LL +G L +
Sbjct: 959 MQRYLNVDIALDTYPWPGGGTTCDALYMGVPVVTMYGARRSTRFSYALLAHIGRTDLAVQ 1018
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+Y++ A+ LA D+ AL L LR M SPV D + + LE Y ++ R
Sbjct: 1019 TPADYIERAVSLAGDLAALDALHRGLRGRMETSPVMDQEGYMRALEQAYHSVSDR 1073
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 238/468 (50%), Gaps = 34/468 (7%)
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH- 159
+AYN G R G + A+ Y Q +R+A + L++ +N + LF H
Sbjct: 110 KAYNLAGQCARFLGRAAEAVHYYAQ-------ARDAAEE--LSLRALNAS--NVLFNRHY 158
Query: 160 --------RDWGKRFMRLYSQ---YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
R + + L++ +T + + ER L IGY+SPD H V F A +
Sbjct: 159 LPASLAEDRRAAEEYGALFADVRPFTHEKHNRSGERRLRIGYLSPDVREHVVLSFSHALM 218
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
D ++V VY A+ +AD+ F EKV ++R++ + ++ A + D IDIL
Sbjct: 219 TALDPARFEVFVY-AMNRADS----FTEKVRNAVDVFRNLSQLSAEEAARSIYRDGIDIL 273
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V+L GHTA L ++A +PAPVQ++ IGY +TGLPT DY + D + + E+L
Sbjct: 274 VDLAGHTAGRTLPILAYRPAPVQISGIGYFASTGLPTADYFLADPVLATGNAAEGFTEKL 333
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
+ LP C+ P A PA I FGSFNN K+ +VL VWA IL VP SR
Sbjct: 334 LVLPHSHFCWQPLHPAPVPAHAPAAGRS-IVFGSFNNFTKLNDRVLSVWAEILRRVPESR 392
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L++K F R L +E G+ +RVD + D++ AY+ +DI+LD FPY
Sbjct: 393 LLLKTDVFSYADSRREALRRIEAAGIPLVRVDAEGA---SADYLAAYARVDIALDPFPYP 449
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G TTC++LYMGVP VT+AG G SLL +G K L A E++Y+ LA+ LA D
Sbjct: 450 GGGTTCDALYMGVPVVTLAGESLGSRFGASLLENIGAKELAAHTEEDYIALAVSLAQDAA 509
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLK 556
AL L LR +M SPV D + L + Y +W Y D LK
Sbjct: 510 ALDVLHAGLRAMMETSPVMDAAGYGRDLGAAYARVWAEYA--DAARLK 555
>gi|389840518|ref|YP_006342602.1| hypothetical protein ES15_1518 [Cronobacter sakazakii ES15]
gi|387850994|gb|AFJ99091.1| hypothetical protein ES15_1518 [Cronobacter sakazakii ES15]
Length = 1116
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 165/532 (31%), Positives = 268/532 (50%), Gaps = 33/532 (6%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
++L + +L A++ + L + N+LG +Y +G M A + + +A
Sbjct: 597 DDLATALHETLDLFNALKIMRSLLRLDEKNGGFWNSLGTLYHARGDMTLAEKCVREAFRF 656
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
P +GV+ D + A E+ L+I P+ + L M + N +L
Sbjct: 657 QPRNPRYLGMMGVVLSDNQKLDEARYFLEKSLEIAPEDFVCFTSLLFVMTHDNRVSAQEL 716
Query: 156 FEAHRDWGKRFMRLYSQYT---SWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
HR++G+R ++ +N KDP R L +G+VS D TH VS F+ D
Sbjct: 717 LAKHREYGERVTAAAARSALELPLNNVKDPLRKLRVGFVSGDLRTHPVSNFLLPFWESFD 776
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+++V Y+A D T R + +WRD+ + ++++A + +D +DIL++L+
Sbjct: 777 RTQFELVGYNAAPMHDEVTDHLRAGAV----LWRDVSQLSDRELARQINDDGVDILIDLS 832
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR-ITDSLADPPETKQKHVEELIRL 331
GHT +L M A +PAPVQ+TWIGYP TTG+P +DYR I+ +LA PP ++ E+++ +
Sbjct: 833 GHTTWTRLPMFALRPAPVQMTWIGYPGTTGVPAMDYRVISSTLASPPGLAEQFTEQILWV 892
Query: 332 PECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV 391
P + P P++ V P PAL NG +TF SFN KI +VL++WA+IL P+++L++
Sbjct: 893 P-MRKIFEPHPQSPDVNPLPALRNGHLTFASFNRPKKINDEVLELWAQILVRAPSAKLLM 951
Query: 392 KCKPFCCD----SVRHRFLSTL----EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLD 443
F D ++ R L+ EQL + R L+ ++++ + +DI LD
Sbjct: 952 G---FMADDEMIAMMTRRLTHFGARPEQLIFRT-RTGLI-------EYLEYHHHIDILLD 1000
Query: 444 TFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
FPY G TTT +MGVP +T+ G A GV + GL +A ++ +YV+ AL
Sbjct: 1001 AFPYTGGTTTNHGAWMGVPTLTLCGETMAGRQGVENMNSYGLAEFVANDKADYVEKALSW 1060
Query: 504 ASDVTALANLRMSLRDLMSKSPVCDGQNFALG--LESTYRNMWHRYCKGDVP 553
L +R+S+R S+ P + F + E R W YC G+ P
Sbjct: 1061 QGRFEELNAIRLSMR---SRIPTDNAGGFRVADTFEKGLREAWKIYCNGEAP 1109
>gi|260888395|ref|ZP_05899658.1| putative TPR domain/SEC-C motif protein [Selenomonas sputigena ATCC
35185]
gi|330838289|ref|YP_004412869.1| tetratricopeptide TPR_2 repeat protein [Selenomonas sputigena ATCC
35185]
gi|260861931|gb|EEX76431.1| putative TPR domain/SEC-C motif protein [Selenomonas sputigena ATCC
35185]
gi|329746053|gb|AEB99409.1| tetratricopeptide TPR_2 repeat protein [Selenomonas sputigena ATCC
35185]
Length = 637
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 245/496 (49%), Gaps = 63/496 (12%)
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG---QNRLLAMNYIN-------- 148
AE Y+ G AGS + + A+ +++ D A N L A+NY+
Sbjct: 158 AEGYSLRGSALTLAGSAAEGVRAFLAASRMEADEAQAVAEYSNALFALNYVAVEERAPFA 217
Query: 149 ---EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIE 205
EG D + R R +++ L IGY+SPD H+V++F+
Sbjct: 218 GLAEGFDGFFSDVERMAHTRVRHAHAR-------------LRIGYISPDLRRHAVAFFLL 264
Query: 206 APLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKI 265
L D + ++V Y A DA + R + G W +I G+ ++ A +V D+I
Sbjct: 265 PLLRAFDRERFEVFCY-ANNSEDAVS---RTMAQQPGVHWTNILGLLPEEAARLVAADEI 320
Query: 266 DILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE------ 319
DIL +L+GHT +N L ++A +PAPVQ+T +GY +TGL IDY + D + D E
Sbjct: 321 DILCDLSGHTKDNCLAVLARKPAPVQITGLGYMGSTGLSAIDYVLGDRVLDAAEDVAEDA 380
Query: 320 -----------------------TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG 356
++K E + LP CY P V P P L+ G
Sbjct: 381 KMAAERTAGGNCRGAAEDGASQGAREKRSERPLSLPHSHFCYLPFVVMPDVAPPPCLSRG 440
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
ITFG FNN +K+T +L +W +IL VP +RL++K + F + R + +LGL++
Sbjct: 441 HITFGCFNNYSKVTDAMLLLWRQILADVPGARLLLKSRLFGSEEGRSIAVERFGRLGLDA 500
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R++L + D++ Y+ MDI+LDT PY G TTCE+LYMGVP VT+ G H G
Sbjct: 501 SRIELRGF---SSDYLAEYADMDIALDTAPYTGGLTTCEALYMGVPVVTLKGGTHGARFG 557
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
SLL GL LIA++ +YV++A LA L LR RD++ SP+ + + + +
Sbjct: 558 ASLLQNAGLPELIAEDAAQYVEIAKLLAGSPETLQMLREKERDMLLASPLMNFRQYVQEV 617
Query: 537 ESTYRNMWHRYCKGDV 552
E+ Y +W R+ GD+
Sbjct: 618 EAAYEEVWRRWMGGDM 633
>gi|390569443|ref|ZP_10249728.1| TPR repeat-containing protein [Burkholderia terrae BS001]
gi|389938303|gb|EIN00147.1| TPR repeat-containing protein [Burkholderia terrae BS001]
Length = 814
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/523 (30%), Positives = 258/523 (49%), Gaps = 14/523 (2%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AEA LG + ++A++ Y+ ++++ + ++ +NL V Y A K
Sbjct: 300 AEAYATLGNAWYGLFRYEEAIDSYRRSVALADDDAEVHHNLAVAYLRTEHPGEALHYARK 359
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
A+ + + NLG + R G + A +Y ++ PD+ A L +++
Sbjct: 360 ALELKDGSSRMHINLGDVLRSLGELDAAASSYRSAIERSPDADVAHTALLFCEASMSQRP 419
Query: 152 DDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYH 211
+G+R +Q+T ++ ++PL +G+VS D TH V F E+ L +
Sbjct: 420 VSDYLADAVYFGERIAANVTQFTHARASRG-KQPLRVGFVSGDLRTHPVGIFTESMLRHI 478
Query: 212 DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVEL 271
D +++ Y D T R + +W ++ + A + +D +DIL+++
Sbjct: 479 DRSRVQLIAYQTNDIEDEITQRLKPLF----DVWTPLWKLSRDAAAQRIFDDGVDILLDM 534
Query: 272 TGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRL 331
GHTA N+L + A +PAP+QVTW+G+ +TG+ IDY + D PPE +E+ RL
Sbjct: 535 AGHTAFNRLPVFAMKPAPIQVTWLGFFASTGIAQIDYVLGDRYVLPPEEAHHFIEKPWRL 594
Query: 332 PECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV 391
P+ +LC TP V P P NGF+TFG LAK+T VL +W R+L VP SRL+V
Sbjct: 595 PDGYLCMTPPECDVSVGPLPMRVNGFVTFGYLGKLAKMTDDVLDLWTRVLREVPGSRLLV 654
Query: 392 KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLN----HDHMQAYSLMDISLDTFPY 447
K +H F +TL++ +D LIL +++ + Y +DI L FPY
Sbjct: 655 KAHEL---DRKHAFDATLQRFAERG--IDASRLILEGGSPRNEYFKTYHRVDIVLSPFPY 709
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G TTT E+L+MG+P V M G ++ S+L G I ++ YV+ +LA++V
Sbjct: 710 PGGTTTAEALWMGLPVVAMKGDRFVGHICESVLHSAGFGEWICVDQAGYVEKICELAANV 769
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
ALA LR +R+ + S +CD + FA MW Y +G
Sbjct: 770 DALATLRAGMREHVLASAMCDARRFASNFVDALEGMWRVYEEG 812
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + AI Y A NP AEA NNLG ++ D A+ A+ ++
Sbjct: 75 NLGNALREHGQLKQAIDSYREAVALNPGYAEAHNNLGNALREDRQPDAAMRSSAQAIELR 134
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NNLG G+ D+A KAI+ YA+A+NNLG + G AID+
Sbjct: 135 PGYAEAYNNLGNALKDLGEADSAVLAYRKAISFRRDYADAHNNLGNALMEQGKYDEAIDS 194
Query: 123 YEQCLKIDPD 132
Y + +D +
Sbjct: 195 YRSAIALDSN 204
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 66/130 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + D A+ A P AEA NNLG KD D AV Y+ A+S +
Sbjct: 109 NLGNALREDRQPDAAMRSSAQAIELRPGYAEAYNNLGNALKDLGEADSAVLAYRKAISFR 168
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+++ + NNLG QGK D A + AIA + A +N+LG L G ++ A +
Sbjct: 169 RDYADAHNNLGNALMEQGKYDEAIDSYRSAIALDSNRALMHNSLGTLLLARGELAEAAAS 228
Query: 123 YEQCLKIDPD 132
+ +++DPD
Sbjct: 229 LRRAVELDPD 238
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
NNLG ++ L +A++ Y+ A+++ P ++++ NNLG + DAA +AI
Sbjct: 74 NNLGNALREHGQLKQAIDSYREAVALNPGYAEAHNNLGNALREDRQPDAAMRSSAQAIEL 133
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
P YAEAYNNLG +D G A+ AY + + D +A N L + +G D+
Sbjct: 134 RPGYAEAYNNLGNALKDLGEADSAVLAYRKAISFRRDYADAHNN--LGNALMEQGKYDEA 191
Query: 156 FEAHR 160
+++R
Sbjct: 192 IDSYR 196
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A ++ + D A++ Y A F A+A NNLG ++ D+A++ Y+ A+++
Sbjct: 143 NLGNALKDLGEADSAVLAYRKAISFRRDYADAHNNLGNALMEQGKYDEAIDSYRSAIALD 202
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N + N+LG + +G++ AA + +A+ +P +NNL RD G A
Sbjct: 203 SNRALMHNSLGTLLLARGELAEAAASLRRAVELDPDRPGVHNNLANTLRDMGEREAAAVH 262
Query: 123 YEQCLKI 129
Y + +++
Sbjct: 263 YSKAMQL 269
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 28/175 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E K+D AI Y A + + A N+LG + R L +A + A+ +
Sbjct: 177 NLGNALMEQGKYDEAIDSYRSAIALDSNRALMHNSLGTLLLARGELAEAAASLRRAVELD 236
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI------------------------AANP- 97
P+ NNL G+ +AAA KA+ + P
Sbjct: 237 PDRPGVHNNLANTLRDMGEREAAAVHYSKAMQLAQAIVDSWLGGAAMATSMARVQSGEPR 296
Query: 98 -TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
T AEAY LG + AID+Y + + + D N LA+ Y+ H
Sbjct: 297 MTLAEAYATLGNAWYGLFRYEEAIDSYRRSVALADDDAEVHHN--LAVAYLRTEH 349
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N + + L +A Y L + P S +L+ LG++ + +A ++ ++IA
Sbjct: 8 NTALAHHQAGRLAEAKAIYDEILRVNPRHSDALHFLGLLACQIQQHEAGITLMRQSIAIL 67
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
P A +NNLG R+ G + AID+Y + + ++P A N
Sbjct: 68 PN-AIYHNNLGNALREHGQLKQAIDSYREAVALNPGYAEAHNN 109
>gi|452966825|gb|EME71833.1| O-linked N-acetylglucosamine transferase [Magnetospirillum sp.
SO-1]
Length = 652
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 270/553 (48%), Gaps = 20/553 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG + + A Y A PH L +A + + A+ +
Sbjct: 107 FNLGNVRMRLGRAAEAEPCYRRAVELLPHLPAVHAQLARSLDATGRAAEAADAMETAVRL 166
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P Q L +LG + G++ AA + AI+ P++A A+ NLG + G + A+
Sbjct: 167 APGDWQMLTDLGALQQQAGRVKAAQGSLRTAISLRPSHAPAHYNLGNAFYGEGRAAEAVA 226
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD-WGKRFMRLYSQYTSWDNTK 180
+ I+P A N L ++Y+ D++ AHR +R L +QY N
Sbjct: 227 CWRTAWDINPRLVEAASNHLNGLHYLPRMTGDEIAGAHRQIMDRRRTALPAQYA---NPP 283
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+P+R + +GYVS + H + + L HD + Y+ D T R
Sbjct: 284 EPDRVIRVGYVSAGFRRHPLGLLMRPVLKGHDRNHVFAACYATRPGGDEITAELRHGA-- 341
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+WR+ G+D+ +A ++ED IDILV+L G TA N+L + A +PAP+QV+W+GYP T
Sbjct: 342 --DLWREAAGLDDAALARQIQEDGIDILVDLDGQTAGNRLELFAAKPAPLQVSWLGYPFT 399
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGL +DY + D PPE + E++ LP LCY PE P L F+TF
Sbjct: 400 TGLAAMDYALMDRATVPPEAEAWFREKVAVLPGSRLCYQ-GPETPEPATPPMLARDFVTF 458
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
GSFNN+AK+ V+ W+RIL VP+SRL++K V RF + G+ R+D
Sbjct: 459 GSFNNIAKLNDSVVASWSRILKRVPDSRLLLKWPHLAHAEVAGRFRNAFAAHGIAGDRLD 518
Query: 421 LL----PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
L P LL Y +DI+LD FPY G T+CE+L+MGVP VT+AG
Sbjct: 519 LRGNSPPEQLLAE-----YGEVDIALDPFPYCGAFTSCEALWMGVPAVTLAGPRPFSRQT 573
Query: 477 VSLLTKVGLKHLIAKNE-DEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
++LLT +G++ +++ + Y LA+ LA+D L LR LR + + V D
Sbjct: 574 LALLTAMGMEAELSRRDVSAYEDLAVALANDPARLERLRRDLRPALRRG-VGDSAAHVTA 632
Query: 536 LESTYRNMWHRYC 548
+E+ +R W +C
Sbjct: 633 VEAFFRQAWSEWC 645
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 54/131 (41%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLGV + + D A+ + A P AEA N G + D D LD+A + A
Sbjct: 38 LTNLGVISQQRGQTDAAMALHRRAQELAPDMAEAWCNRGDLLSDLDRLDEAEADFARAAG 97
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + + NLG V G+ A +A+ P + L G + A
Sbjct: 98 LSPGLAPAWFNLGNVRMRLGRAAEAEPCYRRAVELLPHLPAVHAQLARSLDATGRAAEAA 157
Query: 121 DAYEQCLKIDP 131
DA E +++ P
Sbjct: 158 DAMETAVRLAP 168
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALS---IKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
AEA +N G + D+A Y+ L + P +++L NLGV+ +G+ DAA +
Sbjct: 5 AEALHNQGRV-------DEAESLYRRLLDQAPLSPQAAKALTNLGVISQQRGQTDAAMAL 57
Query: 89 IEKAIAANPTYAEAYNNLG 107
+A P AEA+ N G
Sbjct: 58 HRRAQELAPDMAEAWCNRG 76
>gi|381160359|ref|ZP_09869591.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
gi|380878423|gb|EIC20515.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
Length = 955
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 262/546 (47%), Gaps = 25/546 (4%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
+ A+ + A NP AE + + LD A E Y+ AL N + + +LG
Sbjct: 410 LEEAMTVFRRALQLNPDRAELWFLSANVAEVAGQLDLAEEHYRQALKRNANDASAWTHLG 469
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ + + A E +A+ +P A A NLG+L D A+ A+ + ++ P
Sbjct: 470 ELLRNLNRREEALEAHARALEIDPALAVAQQNLGMLLTDLTRFEEAVAAFREAIRWQPKF 529
Query: 134 RNAGQNRLLAMNYINEGHDDKLFEAHRDWGK-------RFM---RLYSQYTSWDNTKDPE 183
A N L M + + W + R M RL+S N
Sbjct: 530 ALAMSNMLFTMGFAVHWPGKTMRHEASRWEQVALSPQDRHMASARLFS------NPSRIG 583
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
RPL +G +S + H+V+YF++ L + + V +Y +++ F+
Sbjct: 584 RPLKLGVISSELGNHAVAYFLKPWLRAMERRRCTVHLYPTRLRSGPWADSFK----SLAD 639
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
W + G++++++A +R D ID+L+E +GHT+N++L +A + APVQ +IGY TTGL
Sbjct: 640 AWTPVVGLNDRQIAERIRADGIDVLIETSGHTSNHRLAAVAHRAAPVQCHYIGYFATTGL 699
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEA-GPV-CPTPALTNGFITFG 361
+DY I DS+ PP EEL LP + P EA P CP PA G +
Sbjct: 700 TEMDYFIGDSVFTPPWLHADFTEELWALPRSRYAFEPLAEAPAPSWCPDPA---GRLWLA 756
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
SFN AK+ + L++W+ IL AVP + L +K K VR R L TL + G+ + RV +
Sbjct: 757 SFNQFAKVREESLELWSEILRAVPQAHLFLKDKKAADPMVRERILGTLARHGIHADRVKM 816
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
DHM Y+ +D++LD P+ TT ++L+MG P VT+ G A SLLT
Sbjct: 817 ASRTNSWSDHMGLYNYVDLALDPTPFTSATTGFDALWMGTPLVTLLGDQPAGRQAASLLT 876
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+G IA +++YV++AL L DV LR SLR+ M +CDG A L +
Sbjct: 877 GLGRTDWIACTQEDYVRIALDLLDDVQQRQRLRFSLRERMQAGELCDGAGLAATLLEAFE 936
Query: 542 NMWHRY 547
+M+ R+
Sbjct: 937 SMFDRW 942
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A Y A AEA +NLG + + LD+A + ALS+KP + ++ NL
Sbjct: 239 RLEEAEASYRRALELRGDQAEAHHNLGNLLEQLGRLDEAEASFCRALSLKPTLAVAVCNL 298
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+ T QG+ D A E + A+A+ P A + +LG L G A AY + L++ PD
Sbjct: 299 VTLLTGQGRHDEAEEALTTALASQPDEAALHFHLGRLLLARGRPEAATGAYAEALRLQPD 358
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNL---DKAVECYQMALSIKPNFSQSLNNLGVVYT 77
+E A F E ++ + R +L AV A++++P ++ L NLGV+
Sbjct: 142 FEQAEQFTARWPEVAAGWSLLARCRQSLRDRQGAVAAMARAVTLEPGNARWLTNLGVMQK 201
Query: 78 VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137
G + A + KAIA NP EA+ L R G + A +Y + L++ D A
Sbjct: 202 SAGLLADARLNLCKAIAINPHLPEAHLALAGTARAQGRLEEAEASYRRALELRGDQAEAH 261
Query: 138 QN 139
N
Sbjct: 262 HN 263
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 49/115 (42%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ A P A NLGV+ K L A A++I P+ ++ L
Sbjct: 175 AVAAMARAVTLEPGNARWLTNLGVMQKSAGLLADARLNLCKAIAINPHLPEAHLALAGTA 234
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
QG+++ A +A+ AEA++NLG L G + A ++ + L + P
Sbjct: 235 RAQGRLEEAEASYRRALELRGDQAEAHHNLGNLLEQLGRLDEAEASFCRALSLKP 289
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG ++ + D A + A P A A NL + + D+A E AL+
Sbjct: 262 HNLGNLLEQLGRLDEAEASFCRALSLKPTLAVAVCNLVTLLTGQGRHDEAEEALTTALAS 321
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P+ + +LG + +G+ +AA +A+ P +AEA L L D G + A
Sbjct: 322 QPDEAALHFHLGRLLLARGRPEAATGAYAEALRLQPDHAEACLALAELALDQGHLGQAEY 381
Query: 122 AYEQCLKIDPD 132
Y Q L+ PD
Sbjct: 382 HYRQALERWPD 392
>gi|386395382|ref|ZP_10080160.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM1253]
gi|385736008|gb|EIG56204.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM1253]
Length = 746
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 285/584 (48%), Gaps = 50/584 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A + + D A +E A F P EA G++ + + D+A + AL+I+
Sbjct: 165 NRGLAELALRQLDRAKQSFERALLFQPRNVEALVGKGLVNIELKHFDEAKGALEAALAIR 224
Query: 63 PNFSQSLNNLGVV-------------------------YTVQGKMDAAAEM--IEKAIAA 95
P ++ L N G + +QGK A M +AI A
Sbjct: 225 PGSAKILANRGRLNLETSRLEQAASDFDAALALAPKLEVALQGKAQVALAMGNTAQAILA 284
Query: 96 NPTYAEAYNN-------LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
T E Y L + + G I+ AI+ + L I PD+ G+ ++ ++Y++
Sbjct: 285 CTTLLEEYPRSAIGMALLSACFANQGEIASAIELLDAALAIVPDASLIGR-KIFFLDYLS 343
Query: 149 EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+ A + W + T DP+R +V+GYV+ +++ HS ++ + L
Sbjct: 344 DADFAVQQAARKQWWDAIGSRLPRRTLAPRQLDPDRRIVVGYVAAEFWHHSAAFALLPVL 403
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+HD+ +++V YS D T FR +W D + + + ++A ++ DK+DIL
Sbjct: 404 RHHDHARFEIVCYSCSPVRDEMTAAFR----SSADVWVDAWQLSDDELADRIQADKVDIL 459
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
++++GHT N+L + A +PAP+QV+ G+ TGL T+D+ + D + P + E++
Sbjct: 460 IDVSGHTTGNRLHVFARKPAPIQVSGFGHATGTGLQTMDHVLADPIFIPQSARHLLAEKV 519
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP C + P + P P L NG +TFG FN + KI+ + ++VW+ ++ V S+
Sbjct: 520 YDLP-CLITIDPILDV-PASEPPMLRNGHVTFGVFNRIYKISDEAIRVWSNVMREVTGSK 577
Query: 389 LVVKCK----PFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
+V+K P DS+ RF++ G+ V L H+H++A++ +DISLDT
Sbjct: 578 IVIKHTLLDDPMLRDSLIARFVAQ----GVAEENVICLGSTP-RHEHLRAFANVDISLDT 632
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
FP G +T ESLY GVP V G+ + G S++ VGL +AK+++ Y +A + A
Sbjct: 633 FPQNGGVSTWESLYAGVPVVAKLGNGASSRAGGSIVAAVGLDDWVAKDDEGYAAIACKYA 692
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+ LA LR L ++ SP + + + +E+ YR W YC
Sbjct: 693 AQPAHLAKLRSELPARIAASPAGNVETYTRSVEAGYRQFWRDYC 736
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV 78
+ EL HF A + LG+ + A + + A+++ P +Q+ ++LG +
Sbjct: 50 ILNELPEHFG-----ALHLLGLGAFASRQFEAAKQALKYAVTLDPRSAQAFSDLGATHFA 104
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
G+ + A +E+AIA P++ A NLG + AI+ Y++ + + PD +A
Sbjct: 105 LGEYEDARTSLERAIALKPSFPMALANLGNTLLHLNRVEQAIELYDRAIGLKPDHADALC 164
Query: 139 NRLLA 143
NR LA
Sbjct: 165 NRGLA 169
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+ +F+ A + A +P A+A ++LG + + A + A++
Sbjct: 61 LHLLGLGAFASRQFEAAKQALKYAVTLDPRSAQAFSDLGATHFALGEYEDARTSLERAIA 120
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KP+F +L NLG +++ A E+ ++AI P +A+A N G+ + A
Sbjct: 121 LKPSFPMALANLGNTLLHLNRVEQAIELYDRAIGLKPDHADALCNRGLAELALRQLDRAK 180
Query: 121 DAYEQCLKIDP 131
++E+ L P
Sbjct: 181 QSFERALLFQP 191
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG + + +++ A E A P A NLG + +++A+E Y A+ +K
Sbjct: 97 DLGATHFALGEYEDARTSLERAIALKPSFPMALANLGNTLLHLNRVEQAIELYDRAIGLK 156
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + +L N G+ ++D A + E+A+ P EA G++ + A A
Sbjct: 157 PDHADALCNRGLAELALRQLDRAKQSFERALLFQPRNVEALVGKGLVNIELKHFDEAKGA 216
Query: 123 YEQCLKIDPDSRNAGQNR 140
E L I P S NR
Sbjct: 217 LEAALAIRPGSAKILANR 234
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG + + + AI Y+ A P A+A N G+ LD+A + ++ AL
Sbjct: 129 LANLGNTLLHLNRVEQAIELYDRAIGLKPDHADALCNRGLAELALRQLDRAKQSFERALL 188
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+P ++L G+V D A +E A+A P A+ N G L + + A
Sbjct: 189 FQPRNVEALVGKGLVNIELKHFDEAKGALEAALAIRPGSAKILANRGRLNLETSRLEQAA 248
Query: 121 DAYEQCLKIDPDSRNAGQNR 140
++ L + P A Q +
Sbjct: 249 SDFDAALALAPKLEVALQGK 268
>gi|427402978|ref|ZP_18893975.1| hypothetical protein HMPREF9710_03571 [Massilia timonae CCUG 45783]
gi|425718161|gb|EKU81112.1| hypothetical protein HMPREF9710_03571 [Massilia timonae CCUG 45783]
Length = 730
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 169/562 (30%), Positives = 271/562 (48%), Gaps = 50/562 (8%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P +A +LG + +A+ C + ++ +P +L ++G+ GK+D A
Sbjct: 157 LEPQRTDARYDLGYVLYSLHRHKEALACMERVVAEQPAHLNALRHIGLCRRALGKVDDAV 216
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS----RNAGQNR-- 140
++E+A+A P + L G + A+ + ++DP + R R
Sbjct: 217 VILEEAVAREPDNGQLVAELAGTLHMLGRLPEAVAMSRRAQELDPANIMALRTGIHTRFA 276
Query: 141 -------------LLAMNYINEGHD-------------DKLFEAHRDWGKRF---MRLYS 171
LLA E H D+L H +G+R+ +R
Sbjct: 277 LGEWQEALRLARELLAHAPSPEHHSMLLFILSHCCQDGDELTREHFAYGERWETPLRALR 336
Query: 172 QYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLV--YHDYQNYKVVVYSAVVKADA 229
Q + N +DP+R L IG VS D + H+V+ FI AP++ + + VY VK D
Sbjct: 337 QPHA--NVRDPQRKLRIGLVSGDLYRHAVARFI-APVLRTLKNSTQVEFYVYHNQVKEDE 393
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
T R V WR I +D+ ++R D IDIL++L+GH+A N+L + A +PAP
Sbjct: 394 MTHTMRADV----AAWRSIMHLDDAAAERLIRADAIDILIDLSGHSALNRLPLFARKPAP 449
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADP-PETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
VQ TWIGY TTGL +DY + D P ++ E ++RLP F+ + P P A PV
Sbjct: 450 VQATWIGYAGTTGLEAVDYILGDRFWLPGTRYDRQFTENIVRLP-MFVLFLPEPTAPPVN 508
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
P PAL NG+ITFGSF+ +K+ V++ W+ +L A+P +++++ D V +
Sbjct: 509 PLPALENGYITFGSFHRASKLGQDVIRQWSLLLHAIPTAKMLLGGMQEGIDDV---LVDW 565
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
Q G+ R+ L + H Q Y + DI L FPY+G TT +L+MGVP + G
Sbjct: 566 FAQEGIPRERLLLRERAGMYHYLKQHYEV-DICLSPFPYSGGTTIGHALWMGVPTLATVG 624
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
+ + + + + +GL + ++E+ YV+L L+ +V+ALA +R ++R +SP+
Sbjct: 625 ATNPSHAAAAFMMHLGLGAFVTESEETYVKLGALLSENVSALATMRQTMRQRFLESPLGY 684
Query: 529 GQNFALGLESTYRNMWHRYCKG 550
E R MW R+C G
Sbjct: 685 PAILGASFEIAMRRMWTRWCDG 706
>gi|292670019|ref|ZP_06603445.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648320|gb|EFF66292.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 1079
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 250/475 (52%), Gaps = 23/475 (4%)
Query: 79 QGKMDAAAEMIEKAIAANPT-YAEAYNNL--GVLYRDAGSISLAIDAYEQCLKIDPDSRN 135
QG + A + E +AA T A+ L V YR G + A + Y + +P +
Sbjct: 615 QGDLPRAMALAEAYLAARRTPLRHAFMRLRAAVAYR-MGDVR-AAEFYRSAYEEEPSDPS 672
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPER--PLVIGYVSP 193
+ LLA N E D+LF AH + K F + ++P R + +GY+SP
Sbjct: 673 LYSSFLLAQN-AQEADMDELFRAHCAYEKIF-----EDVPRCAKREPYRHKKIRVGYISP 726
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDE 253
D+ + + +FI+ L +D ++ V YS + D T R WRD+ G
Sbjct: 727 DFRRNVMLHFIQPMLTMYDRAHFDVYAYSLTAQPDEATAALR----PHAAAWRDLGGAAP 782
Query: 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS 313
+++AA ++ED+IDILV+L GH A L ++A +PAPVQ+ +GY T+GL +DY +TD+
Sbjct: 783 EEIAACIQEDEIDILVDLAGHAAGGALPVLARRPAPVQMMGLGYTATSGLRAVDYFLTDA 842
Query: 314 LADP--PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITP 371
+ DP +++ E+LIRLP F+ Y P TPA + G+ITFG FN K T
Sbjct: 843 VCDPVGGTSERYFTEKLIRLPSQFV-YVPRAGLPAAAETPARSRGYITFGVFNQYRKYTD 901
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
+L VW I+ VP +RL++K + F ++ + +++LG + RV L P D+
Sbjct: 902 AMLTVWREIMERVPTARLLIKSQVFFSPAMTETARARMKRLGFDLRRVALEPA---TTDY 958
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
MQ Y +DI+LDT+P+ G TTC++LYMGVP VTM G+ + +LL +G L +
Sbjct: 959 MQRYLDVDIALDTYPWPGGGTTCDALYMGVPVVTMYGARRSTRFSYALLAHIGQTDLAVQ 1018
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+Y++ A+ LA D+ AL L LR M SPV D + + LE Y ++ R
Sbjct: 1019 TPADYIERAVSLAGDLAALDALHRGLRGRMETSPVMDQEGYMRALEQAYHSVSDR 1073
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 269/541 (49%), Gaps = 39/541 (7%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA----AE 87
AEA ++ + D+A +Q ++ P+ ++ ++ ++ + A A
Sbjct: 38 AEAAGLRTALHIEAGRADEAFAAWQQRAALAPDDPYTIFLRARIHVMENERICALTLLAP 97
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
++E+ + A +AYN G R G + A+ Y Q +R+A + L++ +
Sbjct: 98 LLEQRLPAA-VAEKAYNLAGQCARFLGRAAEAVHYYAQ-------ARDAAEE--LSLRAL 147
Query: 148 NEGHDDKLFEAH---------RDWGKRFMRLYSQ---YTSWDNTKDPERPLVIGYVSPDY 195
N + LF H R + + L++ +T + + ER L IGY+SPD
Sbjct: 148 NAS--NVLFNRHYLPASLAEDRRAAEEYGALFADVRPFTHEKHNRSRERRLRIGYLSPDV 205
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H V F A + D ++V VY A+ +AD+ F EKV ++R++ + ++
Sbjct: 206 REHVVLSFSHALMTALDPARFEVFVY-AMNRADS----FTEKVRNAVDVFRNLSQLSAEE 260
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
A + D IDILV+L GHTA L ++A +PAPVQ++ IGY +TGLPT DY + D +
Sbjct: 261 AARSIYRDGIDILVDLAGHTAGRTLPILAYRPAPVQISGIGYFASTGLPTADYFLADPVL 320
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQ 375
+ E+L+ LP C+ P A PA I FGSFNN K+ +VL
Sbjct: 321 AAGNAAEGFTEKLLVLPHSHFCWQPLHPAPVPAHAPAAGRS-IVFGSFNNFTKLNDRVLS 379
Query: 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
VWA IL VP SRL++K F R L +E G+ +RVD + D++ AY
Sbjct: 380 VWAEILRRVPESRLLLKTDVFSYADSRREALRRIEAAGIPLVRVDAEGA---SADYLAAY 436
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+ +DI+LD FPY G TTC++LYMGVP VT+AG+ G SLL +G K L A E++
Sbjct: 437 ARVDIALDPFPYPGGGTTCDALYMGVPVVTLAGASLGSRFGASLLENIGAKELAAHTEED 496
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSL 555
Y+ LA+ LA D AL L LR +M SPV D + L + Y +W Y D L
Sbjct: 497 YIALAVSLAQDAAALDALHAGLRAMMETSPVMDAAGYGRDLGAAYARVWAEYA--DAARL 554
Query: 556 K 556
K
Sbjct: 555 K 555
>gi|374575452|ref|ZP_09648548.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
gi|374423773|gb|EHR03306.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
Length = 746
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 287/584 (49%), Gaps = 50/584 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A + + D A +E A F P EA G++ + N D+A + AL+I+
Sbjct: 165 NRGLAELALRQLDRAKQSFERALLFQPRNVEALVGKGLVNIELKNFDEAKGALEAALAIR 224
Query: 63 PNFSQSLNNLGVV-------------------------YTVQGKMDAAAEM--IEKAIAA 95
P ++ L N G + +QGK + M +AI A
Sbjct: 225 PGSAKILANRGRLNLETSRLEQAAADFDAALALAPKLEVALQGKAQVSLAMGNTAQAILA 284
Query: 96 NPTYAEAYNN-------LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
T E Y L + + G I+ A++ + L I PD+ G+ ++ ++Y++
Sbjct: 285 CTTLLEEYPRSAIAMALLSACFANQGEIASAVELLDAALAIVPDAALIGR-KIFFLDYLS 343
Query: 149 EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+ A + W + T +DP+R +V+GYV+ +++ HS ++ + L
Sbjct: 344 DADFAVQQAARKQWWDAIGSKLPRRTLAPRQRDPDRRIVVGYVAAEFWYHSAAFALLPVL 403
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+HD+ +++V YS D T F+ +W D + + + ++A ++ DK+DIL
Sbjct: 404 RHHDHARFEIVCYSCSPVRDEMTDEFK----SMADVWVDAWQLSDDELADRIQADKVDIL 459
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
++++GHT N+L + A +PAP+QV+ G+ TGL T+DY + D + P + E++
Sbjct: 460 IDVSGHTTGNRLHVFARKPAPIQVSGFGHATGTGLQTMDYVLADPVFIPQSARHLLAEKV 519
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP C + P + P P L NG +TFG FN + KI+ + ++VW++++ V S+
Sbjct: 520 YDLP-CLITIDPILDL-PASEPPMLRNGHVTFGVFNRIYKISDEAIRVWSKVMREVAGSK 577
Query: 389 LVVKCK----PFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
+++K P D++ RF++ G+ V L H+H+ A++ +DISLDT
Sbjct: 578 IIIKHTLLDDPMLRDNLVARFVAN----GVAEENVTCLGSTP-RHEHLLAFANIDISLDT 632
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
FP G +T ESLY GVP V G+ + G S++ VGL +A++++ YV +A + A
Sbjct: 633 FPQNGGVSTWESLYAGVPVVAKLGNGASSRAGGSIVAAVGLDDWVAEDDEGYVAIACKYA 692
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+ LA LR L ++ SP + + + +E+ YR W YC
Sbjct: 693 AQPEHLAKLRAELPARIATSPAGNVETYTREVEAAYRQFWRDYC 736
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+ +F++A + A +P A+A ++LG + + A + A++
Sbjct: 61 LHLLGLGAFASRQFEVAKQALKYAVTVDPRSAQAFSDLGATHFALGEYEDARTSLERAIA 120
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KP+F +L NLG + +++ A EM ++AI P +A+A N G+ + A
Sbjct: 121 LKPSFPMALANLGNTFLHLERVEQAIEMYDRAIGLKPDHADALCNRGLAELALRQLDRAK 180
Query: 121 DAYEQCLKIDP 131
++E+ L P
Sbjct: 181 QSFERALLFQP 191
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG + + +++ A E A P A NLG + + +++A+E Y A+ +K
Sbjct: 97 DLGATHFALGEYEDARTSLERAIALKPSFPMALANLGNTFLHLERVEQAIEMYDRAIGLK 156
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + +L N G+ ++D A + E+A+ P EA G++ + + A A
Sbjct: 157 PDHADALCNRGLAELALRQLDRAKQSFERALLFQPRNVEALVGKGLVNIELKNFDEAKGA 216
Query: 123 YEQCLKIDPDSRNAGQNR 140
E L I P S NR
Sbjct: 217 LEAALAIRPGSAKILANR 234
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV 78
+ EL HF A + LG+ + A + + A+++ P +Q+ ++LG +
Sbjct: 50 ILNELPEHFG-----ALHLLGLGAFASRQFEVAKQALKYAVTVDPRSAQAFSDLGATHFA 104
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
G+ + A +E+AIA P++ A NLG + + AI+ Y++ + + PD +A
Sbjct: 105 LGEYEDARTSLERAIALKPSFPMALANLGNTFLHLERVEQAIEMYDRAIGLKPDHADALC 164
Query: 139 NRLLA 143
NR LA
Sbjct: 165 NRGLA 169
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG + + + + AI Y+ A P A+A N G+ LD+A + ++ AL
Sbjct: 129 LANLGNTFLHLERVEQAIEMYDRAIGLKPDHADALCNRGLAELALRQLDRAKQSFERALL 188
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+P ++L G+V D A +E A+A P A+ N G L
Sbjct: 189 FQPRNVEALVGKGLVNIELKNFDEAKGALEAALAIRPGSAKILANRGRL 237
>gi|429094584|ref|ZP_19157113.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter dublinensis 1210]
gi|426740332|emb|CCJ83226.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter dublinensis 1210]
Length = 1117
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 255/498 (51%), Gaps = 33/498 (6%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N+LG +Y G++ A + +A P +GV+ D + A E+ ++I
Sbjct: 632 NSLGAIYHASGEVTLAEKCAREAFRFQPRNPRYLGMMGVVLSDNQKLDEARYFLEKSMEI 691
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT---SWDNTKDPERPL 186
P+ + + L M + N +L HR++G+R S+ +N KDP R L
Sbjct: 692 APEDFDCFTSLLFVMTHDNRVSTQELLAKHREYGERVTAAASRSKLELPLNNVKDPHRKL 751
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
+G+VS D H VS F+ D +++V Y+A AD T + + +WR
Sbjct: 752 RVGFVSGDLRDHPVSNFLLPFWDSFDRTQFELVGYNAAPMADEVT----DHLSAGAVLWR 807
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
D+Y + ++++A + +D +DIL++L+GHT +L M A +PAP+Q+TWIGYP TTG+P +
Sbjct: 808 DVYQLSDRELARQINDDGVDILIDLSGHTTWTRLPMFALRPAPLQMTWIGYPGTTGVPAM 867
Query: 307 DYR-ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNN 365
DYR I+ +LA PP ++ E+++ +P + P P++ V PAL NG +TF SFN
Sbjct: 868 DYRVISSTLASPPGLAEQFTEQILWVP-MRKIFEPHPQSPDVNMLPALRNGHLTFASFNR 926
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD----SVRHRFLSTL----EQLGLESL 417
KI +VL++WA+IL P+++L++ F D ++ R L+ EQL ++
Sbjct: 927 PKKINDEVLELWAQILVRAPSAKLLMG---FMADDEMIAMMTRRLTHFGARPEQLIFKT- 982
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ L+ + +H +DI LD FPY G TTT +MGVP +T+ G A GV
Sbjct: 983 RIGLIGYLEYHHH-------IDILLDAFPYTGGTTTNHGAWMGVPTLTLCGETMAGRQGV 1035
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV--CDGQNFALG 535
+ GL +A ++ +YV AL L +R+S+R S+ P DG A
Sbjct: 1036 ENMNSYGLAEFVANDKADYVNKALSWQGRFEELNAIRLSMR---SRIPTDNTDGFRVADT 1092
Query: 536 LESTYRNMWHRYCKGDVP 553
E R W YC G+ P
Sbjct: 1093 FEKGLREAWKIYCTGEAP 1110
>gi|374575451|ref|ZP_09648547.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
gi|374423772|gb|EHR03305.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
Length = 747
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/512 (29%), Positives = 252/512 (49%), Gaps = 27/512 (5%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
L+ A+ ++ AL+I P +L V GK A I NP +
Sbjct: 243 RLEPALADFEAALAISPKLELALRGKAQTCLVMGKTAQAMAAAAALIEQNPRSEMGLALM 302
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166
G Y + G + AI+ ++ L + PD +A + ++ +Y E + W +
Sbjct: 303 GFSYSNQGDMDAAIEYLDRALALRPDYGDAIRGKIFLEDYRAEADFVVQQAVRKSWWDQI 362
Query: 167 MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVK 226
+ DPE+ +V+GYV+ ++ HS + L +HD+ ++++ Y +
Sbjct: 363 GSKQPRRELPKRPLDPEKRIVVGYVAAEFRQHSAGLTLLPVLRHHDHTKFEIICYYSWPG 422
Query: 227 ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
AD T F+ +W D +G+ + ++A ++ D +DIL++++GHT N+L A +
Sbjct: 423 ADEYTAMFK----SLADVWVDAWGLSDDELADRIQADNVDILIDVSGHTTGNRLQCFARK 478
Query: 287 PAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP 346
PAP+Q T G+ TG+P +DY + D + PP + E++ LP C + P + P
Sbjct: 479 PAPIQATGFGHATGTGMPLMDYVLADPIFIPPSVRHLFAEKIHDLP-CLITIEPVSDLQP 537
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC----KPFCCDSVR 402
P L NG++TFG FN + KI+ ++VW+RI+ +P S++++K P DS+
Sbjct: 538 -SELPMLRNGYVTFGVFNRIYKISDDAIRVWSRIMRELPGSKIILKHGLLDDPLLRDSLI 596
Query: 403 HRFLS------TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
RFL+ ++ LG S +H+ A++ +DIS DTFP G +T ES
Sbjct: 597 ARFLAQGVVEESITCLGTTS-----------RDEHLAAFAQVDISFDTFPQNGGISTWES 645
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMS 516
LY GVP V G + G S++T VGL +A+++D YV++A + AS LA LR
Sbjct: 646 LYKGVPVVAKLGIGASSRAGASIVTAVGLGDWVAEDDDGYVEIARRFASQPEYLAKLRAE 705
Query: 517 LRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
L ++ SP + + + LE+ YR W YC
Sbjct: 706 LPARIAASPAGNVETYTRELEAGYRKFWRDYC 737
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LG+ + + + A E +P +A NNL ++ D + ++A C + A++
Sbjct: 61 MHLLGMCAHDGRRLEEAQQLLERVIALDPRLHDAHNNLATVHFDLGHYEEARRCQERAIA 120
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPNF+ +L NLG G+ + A E+ E+AI P YA+A+ N G++ G I A
Sbjct: 121 LKPNFAVALTNLGNTLMHLGQYEQALELHERAIKIKPDYADAFCNRGMVEIVLGQIMRAK 180
Query: 121 DAYEQCLKIDP 131
+++++ L P
Sbjct: 181 ESFDRALLFQP 191
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LG+ D L++A + + +++ P + NNL V+ G + A
Sbjct: 55 PDHVDAMHLLGMCAHDGRRLEEAQQLLERVIALDPRLHDAHNNLATVHFDLGHYEEARRC 114
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
E+AIA P +A A NLG G A++ +E+ +KI PD +A NR
Sbjct: 115 QERAIALKPNFAVALTNLGNTLMHLGQYEQALELHERAIKIKPDYADAFCNR 166
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + ++ ++ A E A P+ A A NLG ++A+E ++ A+ IK
Sbjct: 97 NLATVHFDLGHYEEARRCQERAIALKPNFAVALTNLGNTLMHLGQYEQALELHERAIKIK 156
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
P+++ + N G+V V G++ A E ++A+ P +AEA G++
Sbjct: 157 PDYADAFCNRGMVEIVLGQIMRAKESFDRALLFQPRHAEAIVGSGMV 203
>gi|72383070|ref|YP_292425.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
gi|72002920|gb|AAZ58722.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
Length = 750
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 177/576 (30%), Positives = 280/576 (48%), Gaps = 49/576 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ ++ A Y A NP+ EA NLG+I KD NL A Y+ A+ IK
Sbjct: 186 NLGIILKDLGNLQDAEFSYRKAIQINPNLPEAYFNLGIILKDLGNLQDAEFSYRKAIQIK 245
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + S NNLG++ GK+ A KAI NP YAEAY+NLG ++ G+ + AI+
Sbjct: 246 PKLANSHNNLGIILKDLGKLQDAELSYRKAIQINPDYAEAYSNLGSTLKEQGNFTDAINQ 305
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF-----------EAHRDWG-------- 163
++ LK++ + +A + I + D++ +A WG
Sbjct: 306 FKHALKLNNELTSAKAGLMSTKGNICDWSDERTRNIWLKSLGIKGKAINPWGLLSLENNP 365
Query: 164 ----KRFMRLY-------SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
KR + Y +QY P+ + IGY S D+ H V I L HD
Sbjct: 366 LNHLKRSKKFYKEKYIRPTQYIK----PSPKSLIHIGYFSADFLNHPVMQLIAPLLELHD 421
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+K+ +YS V K D T E+ K G I+R+I +++ + + R D++DI V+L
Sbjct: 422 KYRFKIYLYSFVPKEDEYT----ERAKKSGCIFRNIKNLNDIEAVELARSDQLDIAVDLM 477
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G+T +N++ + + + AP+Q+ ++GY + G TIDY I D + P E ++ + E++IRLP
Sbjct: 478 GYTRHNRMPIFSYRVAPIQINYLGYNGSIGSDTIDYIIADKITIPREYEKFYSEKVIRLP 537
Query: 333 ECFLCYTPSPEAGPVCPTPALTN----GFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
CF+C E + N GFI F FNN KIT K +W +L + S
Sbjct: 538 NCFICDDHKKEISKESISRKDFNLPDQGFI-FTCFNNNYKITEKEFNIWMNLLRKIEGSV 596
Query: 389 L-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY 447
L + K + +++ ++ S + + + LP+ H+ +SL D++LDTF Y
Sbjct: 597 LWLYKANQWSMNNL-YKEASKRKVDRDRIIFSEKLPM----SKHLARHSLGDLALDTFNY 651
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G T+ +L+ G+P +T G + SLLT +GL LI +E EY AL +AS+
Sbjct: 652 NGGVTSSNALWTGLPVLTKIGQNFTARMSASLLTSLGLPELITYSESEYEDKALYIASNS 711
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
+ L+ L SP+ + + F LE+ Y ++
Sbjct: 712 EEIIRLKSKLNKSKETSPLFNSKLFTQDLENIYLDL 747
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ ++ A + A NP+ EA +NLG+I KD NL A Y+ A+ I
Sbjct: 152 NLGIILKDLGNLQDAEFYTRKAIQINPNLPEAYSNLGIILKDLGNLQDAEFSYRKAIQIN 211
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN ++ NLG++ G + A KAI P A ++NNLG++ +D G + A +
Sbjct: 212 PNLPEAYFNLGIILKDLGNLQDAEFSYRKAIQIKPKLANSHNNLGIILKDLGKLQDAELS 271
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+PD A N
Sbjct: 272 YRKAIQINPDYAEAYSN 288
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+G+ + ++ A + A NP A A +NLG+I KD NL A + A+ I
Sbjct: 118 NMGIIFKDLGNLQDAEFYTRKAIQINPDSALAYSNLGIILKDLGNLQDAEFYTRKAIQIN 177
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN ++ +NLG++ G + A KAI NP EAY NLG++ +D G++ A +
Sbjct: 178 PNLPEAYSNLGIILKDLGNLQDAEFSYRKAIQINPNLPEAYFNLGIILKDLGNLQDAEFS 237
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I P N+ N
Sbjct: 238 YRKAIQIKPKLANSHNN 254
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G ++ K A++ A NP+ AEA N+G+I+KD NL A + A+ I
Sbjct: 84 NYGAILRDLGKLKDAVLAVREAIKINPNFAEAYCNMGIIFKDLGNLQDAEFYTRKAIQIN 143
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + + +NLG++ G + A KAI NP EAY+NLG++ +D G++ A +
Sbjct: 144 PDSALAYSNLGIILKDLGNLQDAEFYTRKAIQINPNLPEAYSNLGIILKDLGNLQDAEFS 203
Query: 123 YEQCLKIDPD 132
Y + ++I+P+
Sbjct: 204 YRKAIQINPN 213
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
FN H A N G I +D L AV + A+ I PNF+++ N+G+++ G + A
Sbjct: 76 FNDHRVFA--NYGAILRDLGKLKDAVLAVREAIKINPNFAEAYCNMGIIFKDLGNLQDAE 133
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
KAI NP A AY+NLG++ +D G++ A + ++I+P+
Sbjct: 134 FYTRKAIQINPDSALAYSNLGIILKDLGNLQDAEFYTRKAIQINPN 179
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N + + + N+ +A + YQ + N + N G + GK+ A + +AI N
Sbjct: 50 NQAIKFHLQGNILEAKKYYQYIIDQGFNDHRVFANYGAILRDLGKLKDAVLAVREAIKIN 109
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
P +AEAY N+G++++D G++ A + ++I+PDS A N
Sbjct: 110 PNFAEAYCNMGIIFKDLGNLQDAEFYTRKAIQINPDSALAYSN 152
>gi|296448664|ref|ZP_06890529.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
gi|296253828|gb|EFH00990.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
Length = 716
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 252/520 (48%), Gaps = 19/520 (3%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG + +A ++MA + P+ + + + +++AIA P
Sbjct: 197 LGTQLGKSEREREAGMLFEMAAKVAPDIALPQYFFAHFLISHHLYEMGLKHVDRAIALEP 256
Query: 98 TYAE--AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
E A G+L + G I ++ +Y + ++DP S + L + + L
Sbjct: 257 RSGEYQALRAFGLLGQ--GRIDESVASYRRAGELDPSSADIAGGLLFTLQHKTGVTKQDL 314
Query: 156 FEAHRDWGKRFM-RLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
+AH+ W + R ++ N D R +G VS D H+V+Y +
Sbjct: 315 LDAHKRWAALYRPREPKDRFAFGNDPDSGRRPRLGLVSADMHRHAVTYLVLRAFEQLGAL 374
Query: 215 NYKVVVYSAVVKADAKTI--RFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
Y++ Y K D K F ++ WRD+ +D+ ++AA++ E +D+L +L+
Sbjct: 375 GYEIFCY----KTDRKRQDDEFSDRYKAVAASWRDVSDLDDDQLAALIAEQGVDVLFDLS 430
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
GHT +L + A + APVQ++W GY T GL T D I D + PP + +VE +IRLP
Sbjct: 431 GHTHGCRLTLFAQRAAPVQLSWAGYVGTIGLDTYDGLIADPVEAPPCDDEYYVEPIIRLP 490
Query: 333 ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
+C++CY P A V P P L +G TFG FN AK+ +V + WARIL VPN R+++
Sbjct: 491 DCYVCYQPPLRAPDVGPLPFLESGVFTFGCFNRPAKLNAEVARAWARILERVPNGRILLV 550
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH---MQAY-SLMDISLDTFPYA 448
+ + LE GL RVDL+ D +QAY +D++LD FPY+
Sbjct: 551 YGGLQEPTTQEAVYMILENGGLSRERVDLIG----ESDQQKLLQAYVERIDLALDPFPYS 606
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G TT E+++MGVP VTM G A + LT GL H + ++YV+LA+ A
Sbjct: 607 GGVTTLEAMWMGVPVVTMVGETFAGRHSATHLTAAGLSHFCTYSVEDYVELAVGWAERPQ 666
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
LA+LR+ LR+ ++ SP+ D F L + +W +C
Sbjct: 667 ELASLRLRLREQVASSPLNDPVRFGNNLSTALMGLWKDWC 706
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
++ GV Y ++ A+ +E A P G+ D ++A+ +Q L++
Sbjct: 25 HDKGVEYSRADRWTKALHEFEEAVRCAPDQPRFHYGHGIALSRFDRFEEAIAAFQRELAM 84
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+ +L +G + G+ + KA+ NLG+ G AI
Sbjct: 85 KPDHPPTLAEIGACHARLGRRKEGIPYLRKALNLFGGMPNHQFNLGLALLSEGKPLEAIA 144
Query: 122 AYEQCLKIDPDSRNAGQNRLLA 143
A+++ L +DP NA + R LA
Sbjct: 145 AFDRALALDPTYINAYRLRGLA 166
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y G+A +F+ AI ++ P +G + + + + AL++
Sbjct: 59 YGHGIALSRFDRFEEAIAAFQRELAMKPDHPPTLAEIGACHARLGRRKEGIPYLRKALNL 118
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
NLG+ +GK A ++A+A +PTY AY G+ + G+ ++
Sbjct: 119 FGGMPNHQFNLGLALLSEGKPLEAIAAFDRALALDPTYINAYRLRGLAHAINGNQQQSVQ 178
Query: 122 AYEQCLKIDPDSRN 135
+ + D+RN
Sbjct: 179 DLHAAVAL--DTRN 190
>gi|420246619|ref|ZP_14750055.1| tetratricopeptide repeat protein [Burkholderia sp. BT03]
gi|398073904|gb|EJL65063.1| tetratricopeptide repeat protein [Burkholderia sp. BT03]
Length = 862
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 248/523 (47%), Gaps = 4/523 (0%)
Query: 22 ELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81
E A +P + A LG +Y + A+ Y+ AL + P L +
Sbjct: 331 EQAIRIDPESSAAYRMLGEVYTEMKKRPAAILAYRHALELSPEDDAVWCRLASALCEDRQ 390
Query: 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRL 141
+D A + I KA + + LG + G+I +I+ + + L++ D L
Sbjct: 391 LDEALDSINKAFSLGKPTGAKHVVLGDVLSARGAIEESIEEHIKGLELGIDPMQVYARLL 450
Query: 142 LAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
M + E +G +T ++ D RPL +G+VS D H V
Sbjct: 451 FTMPGSPRYTAFDMREHAVRYGHLVASKAKPFTHAASSYDGSRPLRLGFVSGDLRQHPVG 510
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
F+E+ + + D + + Y D E++ W + + + A +
Sbjct: 511 IFLESIMGHLDRTRIEPIAYVTFSDGDDAVT---ERLKPHFSAWHKMDRMKTEDAARQIH 567
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
+DKIDILV+L+GHTA + L + A +PAPVQV+W+G+ TTG IDY + D P + +
Sbjct: 568 DDKIDILVDLSGHTAFSGLPVFAWRPAPVQVSWLGFFATTGCEFIDYFVGDRFTLPLDEE 627
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
+ VE+ RLP+ +LC+TP A V P P NGF+TFG F L K+T V+ +W+R+L
Sbjct: 628 AQFVEKPWRLPDSYLCFTPPASAPDVGPLPMERNGFVTFGYFGKLVKVTDDVVALWSRLL 687
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
VP S+L +K D +++R + G+ + R+ +L + Y+ +DI
Sbjct: 688 HRVPGSKLFLKSHGLGADYLQYRTIERFVAHGIGADRL-ILEGESARFQYFDTYNRVDIM 746
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
L FPY G TTT E L+MG P +++ G ++ SL G+ +A + D+Y+ A
Sbjct: 747 LSPFPYPGGTTTAEGLWMGAPVLSLRGDRFLSHIAESLQQAAGMGEWVAADRDDYLDKAA 806
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
A+D T LA LR LR+ + SP+CD FA L + MW
Sbjct: 807 AFAADPTHLAALRAGLREQVRVSPMCDAPRFAGNLVDAFHQMW 849
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A +M D A V Y A P A A NNLG + + + A++C++ A+ +K
Sbjct: 144 NLGNALQDMSNLDEAAVSYCKAIELKPDHALAFNNLGNVMFAKGDAATAIQCFRKAVELK 203
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + ++LG + G + AA E + +A +P A++YN G RDAG + A A
Sbjct: 204 PDLRDAHHSLGALLREHGDVQAALETLR--LALDPKDADSYNTYGCGLRDAGKLKEAEQA 261
Query: 123 YEQCLKIDPD 132
+ L+ID +
Sbjct: 262 FRDALEIDAE 271
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A P A+A NNLG +D NLD+A Y A+ +KP+ + + NNLG V +G
Sbjct: 131 AIKLQPDYADAYNNLGNALQDMSNLDEAAVSYCKAIELKPDHALAFNNLGNVMFAKGDAA 190
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A + KA+ P +A+++LG L R+ G + A++ L +DP
Sbjct: 191 TAIQCFRKAVELKPDLRDAHHSLGALLREHGDVQAALETLR--LALDP 236
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 8 YGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
YG ML + AI Y+ A N +A NNLG + ++ A+ ++P
Sbjct: 77 YGNMLMEVNRVRDAIDSYQHAIRLNALYPDAYNNLGYALCRAKQPEASMRACVNAIKLQP 136
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++ + NNLG +D AA KAI P +A A+NNLG + G + AI +
Sbjct: 137 DYADAYNNLGNALQDMSNLDEAAVSYCKAIELKPDHALAFNNLGNVMFAKGDAATAIQCF 196
Query: 124 EQCLKIDPDSRNA 136
+ +++ PD R+A
Sbjct: 197 RKAVELKPDLRDA 209
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
D+ L +P A++ N G +D L +A + ++ AL I + + NL
Sbjct: 222 DVQAALETLRLALDPKDADSYNTYGCGLRDAGKLKEAEQAFRDALEIDAELAVAHFNLAG 281
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
V G++D A +AI + + +AY LG L AG A+ EQ ++IDP+S
Sbjct: 282 VLRENGELDQAEMSFGEAIRIDAEFGQAYRQLGSLLSHAGRHQEALKHCEQAIRIDPESS 341
Query: 135 NA 136
A
Sbjct: 342 AA 343
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+ + D I E + P A NN G + + + + A++ YQ A+
Sbjct: 41 LHFLGLLSCQTRNHDEGIRLMERSIAVRPE-AMYFNNYGNMLMEVNRVRDAIDSYQHAIR 99
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ + + NNLG + +A+ AI P YA+AYNNLG +D ++ A
Sbjct: 100 LNALYPDAYNNLGYALCRAKQPEASMRACVNAIKLQPDYADAYNNLGNALQDMSNLDEAA 159
Query: 121 DAYEQCLKIDPDSRNAGQN 139
+Y + +++ PD A N
Sbjct: 160 VSYCKAIELKPDHALAFNN 178
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+FD A YEL P ++A + LG++ N D+ + + +++++P + NN
Sbjct: 19 RFDDARPLYELVLQSEPEHSDALHFLGLLSCQTRNHDEGIRLMERSIAVRPE-AMYFNNY 77
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + ++ A + + AI N Y +AYNNLG A ++ A +K+ PD
Sbjct: 78 GNMLMEVNRVRDAIDSYQHAIRLNALYPDAYNNLGYALCRAKQPEASMRACVNAIKLQPD 137
Query: 133 SRNAGQN 139
+A N
Sbjct: 138 YADAYNN 144
>gi|357635842|ref|ZP_09133719.1| Methyltransferase type 11 [Desulfovibrio sp. FW1012B]
gi|357580682|gb|EHJ46016.1| Methyltransferase type 11 [Desulfovibrio sp. FW1012B]
Length = 715
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 234/472 (49%), Gaps = 11/472 (2%)
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
QG + A + E P NL + R+AG + Y ++ PD+ +
Sbjct: 55 QGFLARARDCFEAGGKLAPHDHRFGVNLANVDREAGDHAACRRRYAALERLLPDNPVLRR 114
Query: 139 NRLLAMNYINEGHDDKLFEAHRDWGKRFM-RLYSQYTSWDNTKDPERPLVIGYVSPDYFT 197
N L+++ Y D + R WG M R + RPL +GYVS D+
Sbjct: 115 NALVSLEYDPTATDAERLAKARQWGAWAMARAGGTPDRPPLSALSGRPLRVGYVSADFCQ 174
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
H V F++ L HD V Y A D T R R + +WRD+ G+ + +A
Sbjct: 175 HPVGLFVQDVLAAHDPGRVVVHTYDAGSHRDDVTERIR-----RVSVWRDVAGLADAALA 229
Query: 258 AMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
+R D ID+LV+L+GHTA ++L A +PAPV +W+GY TTGLP +D + D P
Sbjct: 230 GRIRADGIDVLVDLSGHTAGSRLTAFALRPAPVLASWLGYFATTGLPVLDAVLLDPWHAP 289
Query: 318 PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
P T+ E ++RLP CY P P A V P P L G +T+G NN AK+ P+V +W
Sbjct: 290 PGTEAWFTETVVRLPRSRFCYRPVPFAPDVAPPPCLDRGHVTYGCCNNTAKLNPQVFALW 349
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
A IL VP++RLV+K + F D++R R T LG++ R+DL + D +Q Y+
Sbjct: 350 AEILRRVPDARLVLKWRTFRDDALRQRVRQTFAGLGVDPGRLDLRG-PSFHADLLQEYAD 408
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG----LKHLIAKNE 493
+DI+LD FP++G T+CE L+MGVP VT GS ++ L + L +A N
Sbjct: 409 IDIALDPFPFSGGHTSCECLWMGVPVVTWPGSRLVSRQTLAFLANLDRPDWLGQWVADNP 468
Query: 494 DEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
+YV A L + + +R LR M +P+ D F LE+ N++
Sbjct: 469 ADYVTKACALGAKQHQIGTIRHQLRPAMQAAPLTDAARFTRDLEAALINLYQ 520
>gi|288962056|ref|YP_003452366.1| tetratricopeptide TPR_2 repeat protein [Azospirillum sp. B510]
gi|288914336|dbj|BAI75822.1| tetratricopeptide TPR_2 repeat protein [Azospirillum sp. B510]
Length = 721
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 160/509 (31%), Positives = 261/509 (51%), Gaps = 14/509 (2%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A A +NL V + D A + A+ +P+ + L LG V ++ AAA+
Sbjct: 205 PDHAPALSNLAVARLALGDRDGAELAARQAVVTRPDLADCLLRLGEVLQRADRLGAAADA 264
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
A+A NP AEA+ NL ++ + G + A + L +DP + N L +
Sbjct: 265 YRAALAWNPALAEAHANLALVRQGQGLLDAADQGNRRALALDPTLADVRSN-LAYLQLFR 323
Query: 149 EG-HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP---ERPLVIGYVSPDYFTHSVSYFI 204
G EAHRDW + + W P + PL + +S D+ H F
Sbjct: 324 PGVTAAAALEAHRDWDR--VHGIPHRGRWVKPGKPSASKGPLTVAILSGDFRRHPAGLFA 381
Query: 205 EAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDK 264
+ Q+ ++++Y+ ++D T RFR+ + W + G+ + VAA +R+D+
Sbjct: 382 IRTVEALPGQDIRLLLYANQSESDDVTERFRKAAAR----WTPVAGLSDADVAARIRQDR 437
Query: 265 IDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH 324
DIL++L GH A+ + G+ A +PA +QV W GY TTGL +D + D P ++ +
Sbjct: 438 PDILIDLAGHNAHGRPGVFARKPAALQVAWSGYMATTGLAAMDALVADRHHVPEGMERFY 497
Query: 325 VEELIRLPECFLCYTP--SPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILC 382
E ++R+P+ F+ Y P +A P+ P P+L+ +TFGSFN L K+ VL WA IL
Sbjct: 498 AERVLRMPDAFIAYDPPGDGDALPLTPPPSLSGKPVTFGSFNILTKLNDDVLAAWAAILN 557
Query: 383 AVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
+P++RL++K K C + L G+ RV ++ + DHM+ + +D++L
Sbjct: 558 RMPDARLLMKTKALSCPVTAALWRCRLTAAGIAEDRVTMVGATN-SLDHMRWCASVDVAL 616
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
D FP++G+TTT E+L+MGVP +T+ G + ++ LT G+ +A + +YV A+
Sbjct: 617 DPFPFSGSTTTLETLWMGVPVITLPGETFSSRHSLAFLTVAGVADCVATDPADYVDRAVA 676
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQN 531
AS+ LA+LR LR M+ P+CDG+
Sbjct: 677 WASEPQRLADLRRGLRSRMANGPLCDGER 705
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGV + + + D A+ + A H N A+ +NLG K L++AV ++ A+ ++P
Sbjct: 44 LGVVHLQSGQPDRAVKLIKSAIHHNHRVADYHDNLGSALKMLGRLEEAVSAHRQAIRLRP 103
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+F+Q+L NLG G+++ AA +A A P YA A NLG + G + A DAY
Sbjct: 104 DFAQALYNLGNALEASGRLEEAATAFRQAAARRPGYARARFNLGNVLAALGRRAEADDAY 163
Query: 124 EQCLKIDPDSRNAGQNR 140
L DP+ NR
Sbjct: 164 RAALADDPEFVEVHANR 180
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 40 VIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY 99
V + L +A Y L P + + + LGVV+ G+ D A ++I+ AI N
Sbjct: 12 VAHHQAGRLAEAAALYHAVLDALPGHADAAHLLGVVHLQSGQPDRAVKLIKSAIHHNHRV 71
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A+ ++NLG + G + A+ A+ Q +++ PD
Sbjct: 72 ADYHDNLGSALKMLGRLEEAVSAHRQAIRLRPD 104
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + + A+ + A P A+A NLG + L++A ++ A + +
Sbjct: 77 NLGSALKMLGRLEEAVSAHRQAIRLRPDFAQALYNLGNALEASGRLEEAATAFRQAAARR 136
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
P ++++ NLG V G+ A + A+A +P + E + N G L
Sbjct: 137 PGYARARFNLGNVLAALGRRAEADDAYRAALADDPEFVEVHANRGSL 183
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA+ + + A Y P A+A + LGV++ D+AV+ + A+
Sbjct: 12 VAHHQAGRLAEAAALYHAVLDALPGHADAAHLLGVVHLQSGQPDRAVKLIKSAIHHNHRV 71
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
+ +NLG + G+++ A +AI P +A+A NLG
Sbjct: 72 ADYHDNLGSALKMLGRLEEAVSAHRQAIRLRPDFAQALYNLG 113
>gi|386395383|ref|ZP_10080161.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM1253]
gi|385736009|gb|EIG56205.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM1253]
Length = 747
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/512 (29%), Positives = 254/512 (49%), Gaps = 27/512 (5%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
L+ A+ ++ AL+I P +L V GK A I NP +
Sbjct: 243 RLEPALADFEAALAISPKLELALRGKAQTCIVMGKTAQAMAAATVLIEQNPRSERGLALM 302
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166
G Y + G + AI+ ++ L I PD +A + ++ +Y E + W +
Sbjct: 303 GFSYSNQGDMDAAIEYLDRALAIRPDYGDAIRGKIFLEDYRAEADFVVQQAVRKSWWDQI 362
Query: 167 MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVK 226
+ DPE+ +V+GYV+ ++ HS + L +HD+ ++++ Y
Sbjct: 363 GSKQPRRELPKRPLDPEKRIVVGYVAAEFRQHSAGLSLLPVLRHHDHTRFEIICYYTWPG 422
Query: 227 ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
AD T RF+E +W + + + + ++A ++ D +DIL++++GHT N+L A +
Sbjct: 423 ADEYTARFKELA----DVWVEAWQLSDDELADRIQADNVDILIDVSGHTTGNRLQCFARK 478
Query: 287 PAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP 346
PAP+Q T G+ TG+P +DY + D + PP + E++ LP C + P + P
Sbjct: 479 PAPIQATGFGHATGTGMPIMDYVLADPVFIPPSVRHLFPEKIHDLP-CLITIEPISDQQP 537
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC----KPFCCDSVR 402
P L NG++TFG FN + KI+ + +++W+R++ +P S++V+K P DS+
Sbjct: 538 -SELPMLRNGYVTFGVFNRIYKISDEAIRLWSRLMRELPGSKIVLKHGLLDDPLLRDSLI 596
Query: 403 HRFLS--TLEQ----LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
RFL+ +E+ LG S DH+ A++ +DISLDTFP G +T ES
Sbjct: 597 ARFLAQGVIEENITCLGTTS-----------RDDHLAAFAQVDISLDTFPQNGGISTWES 645
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMS 516
LY GVP V G + G S++ VGL +A++++ Y+++A + AS LA LR
Sbjct: 646 LYKGVPVVAKLGIGASSRAGASIVAAVGLGDWVAEDDEGYIEIARKFASQPDYLAKLRAE 705
Query: 517 LRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
L ++ SP + + + LE+ YR W YC
Sbjct: 706 LPARIAASPAGNVETYTRELEAGYRKFWRDYC 737
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 70/131 (53%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LG+ + + + A E +P +A NNL ++ D + ++A C + A++
Sbjct: 61 MHLLGMCAHDGRRLEEAQQLLERVIALDPRLHDAHNNLATVHFDLGHHEEARRCQERAIA 120
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPNF+ +L NLG G+ + A E+ E+AI P YA+A+ N G++ G + A
Sbjct: 121 LKPNFAVALTNLGNTLMHLGQYEQALELHERAIKIKPDYADAFCNRGMVEIVLGQVMRAK 180
Query: 121 DAYEQCLKIDP 131
+++++ L P
Sbjct: 181 ESFDRALLFQP 191
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LG+ D L++A + + +++ P + NNL V+ G + A
Sbjct: 55 PDHVDAMHLLGMCAHDGRRLEEAQQLLERVIALDPRLHDAHNNLATVHFDLGHHEEARRC 114
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
E+AIA P +A A NLG G A++ +E+ +KI PD +A NR
Sbjct: 115 QERAIALKPNFAVALTNLGNTLMHLGQYEQALELHERAIKIKPDYADAFCNR 166
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + ++ + A E A P+ A A NLG ++A+E ++ A+ IK
Sbjct: 97 NLATVHFDLGHHEEARRCQERAIALKPNFAVALTNLGNTLMHLGQYEQALELHERAIKIK 156
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
P+++ + N G+V V G++ A E ++A+ P +AEA G++
Sbjct: 157 PDYADAFCNRGMVEIVLGQVMRAKESFDRALLFQPRHAEAIVGSGMV 203
>gi|117926548|ref|YP_867165.1| hypothetical protein Mmc1_3269 [Magnetococcus marinus MC-1]
gi|117610304|gb|ABK45759.1| TPR repeat-containing protein [Magnetococcus marinus MC-1]
Length = 693
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 264/531 (49%), Gaps = 10/531 (1%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y+ A NP N ++ + ++A + L+ +P + + N GV+
Sbjct: 161 YKQARALNPASINHLYNHALLLNQMEQHEQAEALFLTVLAQRPRMAVAHNGYGVLLRKTK 220
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+ A E+A+ + T A+NNL D G AI + L ++ ++R N
Sbjct: 221 RHPQAQHHFERALQEDATLVAAHNNLANTLVDMGQADAAIAHFRAALALE-ENREIRSNM 279
Query: 141 LLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSV 200
L+A++Y + + L++ R W K + S+ N DP+R L +GY+S D H +
Sbjct: 280 LMALSYSSHYRGEDLYQELRVWNKHHGGGETT-PSFPNDADPQRRLRVGYLSGDLCQHPL 338
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
+F L HD Q + VY+ + K D T R++V W D+ G + VA +
Sbjct: 339 GFFTLPLLQNHDKQAVESFVYANIPKQDWLTEACRQQVDH----WYDLAGQPDGVVAQQI 394
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D+ID+LV+L+GHT N +G++ + APVQ+ G + G+ T+D + D+ P
Sbjct: 395 AQDQIDVLVDLSGHTRGNLIGLLVKRSAPVQLLGGGCYCSNGIDTMDGVLADAYQVPDAL 454
Query: 321 KQKHVEELIRLPECF-LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
E LIRL Y P P PV P PAL G ITFG NNLAK P V+ +W+
Sbjct: 455 ASTFSEPLIRLHGYLNTVYAPPPYLPPVAPLPALEKGHITFGCCNNLAKFNPAVVALWST 514
Query: 380 ILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM-QAYSLM 438
+L +P+++L+++ R Q G+E+ R+ L + +H+ + Q Y M
Sbjct: 515 LLKRLPHAKLLLRTFALNGAETRAWVCQQFAQHGIEAQRLVLHGGV--SHEQLLQGYGEM 572
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
DI+LD FPY+G TT E+L+MGVP V + G A V L VGL KNE YV+
Sbjct: 573 DIALDPFPYSGGLTTVEALWMGVPVVALHGDRMAGRHSVGYLNCVGLGAWAVKNEQAYVE 632
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
A+ +A D+ LA LR +LR M SPV DG + +E YR +W R+C+
Sbjct: 633 HAVAMAQDLAGLAALRQALRGRMEASPVADGAGYTRMVEGVYRTLWQRWCQ 683
>gi|296447904|ref|ZP_06889814.1| Tetratricopeptide TPR_2 repeat protein [Methylosinus trichosporium
OB3b]
gi|296254590|gb|EFH01707.1| Tetratricopeptide TPR_2 repeat protein [Methylosinus trichosporium
OB3b]
Length = 734
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 264/550 (48%), Gaps = 16/550 (2%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G+A+ + ++V +E A + +A +G + +A + ++MA + PN
Sbjct: 185 GLAHALGGDGEKSVVDFEAAAGIDDKNPDAMIAVGGYFSRNARDLEAGQLFEMAARVAPN 244
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ + G + + +++AI+ +P+ AEA+ G G + A+ AY
Sbjct: 245 IALPQSVFGHYLIAHRRYELGMSFVDRAISLDPSLAEAHVARGFGLLGQGRVDEAVAAYR 304
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE- 183
++ P L A+ + +L EAH+ W R + +P
Sbjct: 305 HAAQLRPSDAYIAGTLLFALQHNPGVTRAQLLEAHKSWAA-LCRPGAPRDRLSFANEPSL 363
Query: 184 RPLVIGYVSPDYFTHSVSY-----FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
R L IG VS D H+V++ F H+ YK K F ++
Sbjct: 364 RKLRIGVVSADMRRHAVTFLTLRAFERLAAFGHEIHCYKT-------DRKFKDDEFSDRY 416
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
WRD+ +D+ +AA+V D IDIL +L+GHTA N+L + A + APVQV+W GY
Sbjct: 417 KACAKTWRDVSDLDDAALAALVEGDAIDILFDLSGHTAGNRLSLFAMRAAPVQVSWAGYV 476
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
T GL T D I D + PP+ + +VE + RLP+C++CY P +A V P PA+
Sbjct: 477 GTIGLDTYDGIIADPVEIPPDHEHSYVEPVARLPDCYVCYHPPLQAPDVGPLPAMRTNRF 536
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFG FN AK+ ++ + WARIL V +SR+ + D R LE G+ R
Sbjct: 537 TFGCFNRPAKLNVELARAWARILERVADSRITLVYGGLDEDGTREAVYRVLESGGVRRDR 596
Query: 419 VDLLPLILLNHDHMQAYSL-MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
VDL+ D ++AYS +D++LD FPY+G TT E+++MGVP VT+ G A
Sbjct: 597 VDLVG-DSEQKDLLEAYSRKVDLALDPFPYSGGVTTLEAMWMGVPTVTLVGDTFAGRHSA 655
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+ LT GL + D+YV+LA+ A LA LR LRD ++ SP+ D FA LE
Sbjct: 656 THLTAAGLAAFCTYSVDDYVELAVSWAHRREELAALRARLRDNVAASPLNDEVRFARNLE 715
Query: 538 STYRNMWHRY 547
+W ++
Sbjct: 716 EALMQLWSQW 725
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y LG A ++ A+ ++ P + A +LG LD+A+ C Q L
Sbjct: 80 YALGGALAQLGHVREAMSAFQRELAILPGDSAALADLGTCLARIGRLDEAILCLQTVLRR 139
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P+ + NLG+ Q + A E ++++I +PTY +AY G+ + G ++
Sbjct: 140 RPDMRFAQYNLGLALLTQKRRVEAIEALDRSIRLDPTYGDAYRVRGLAHALGGDGEKSVV 199
Query: 122 AYEQCLKID---PDS 133
+E ID PD+
Sbjct: 200 DFEAAAGIDDKNPDA 214
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G+ + + +++ A ++ A P + LG ++ +A+ +Q L+I P
Sbjct: 49 GLEHAKSGRWEQAAREFDAAVKCAPDQPDFNYALGGALAQLGHVREAMSAFQRELAILPG 108
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
S +L +LG G++D A ++ + P A NLG+ AI+A +
Sbjct: 109 DSAALADLGTCLARIGRLDEAILCLQTVLRRRPDMRFAQYNLGLALLTQKRRVEAIEALD 168
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKL-FEA 158
+ +++DP +A + R LA +G + FEA
Sbjct: 169 RSIRLDPTYGDAYRVRGLAHALGGDGEKSVVDFEA 203
>gi|260598428|ref|YP_003210999.1| hypothetical protein CTU_26360 [Cronobacter turicensis z3032]
gi|260217605|emb|CBA31875.1| hypothetical protein CTU_26360 [Cronobacter turicensis z3032]
Length = 1090
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/499 (32%), Positives = 257/499 (51%), Gaps = 35/499 (7%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N+LG +Y +G M A + +A P +GV+ D + A E+ L+I
Sbjct: 605 NSLGTLYHARGDMTLAEKCAREAFRFQPRNPRYLAMMGVVLSDNQKLDEARYFLEKSLEI 664
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWD----NTKDPERP 185
P + + L + + N +L HR++G+R + ++ + D N KDP R
Sbjct: 665 APQDFDCFTSLLFVLTHDNRVSAQELLAKHREYGER-VTAHAVRCALDLPLNNVKDPNRK 723
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +G+VS D TH VS F+ D +++V Y+A D T R + +W
Sbjct: 724 LRVGFVSGDLRTHPVSNFLLPFWASFDRTQFELVGYNAAPMHDEVTDHLRAGAV----LW 779
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
RD Y + ++++A + +D +DIL++L+GHT +L M A +PAP+Q+TWIGYP TTG+P
Sbjct: 780 RDAYQLSDRELARQINDDGVDILIDLSGHTTWTRLPMFALRPAPLQMTWIGYPGTTGVPA 839
Query: 306 IDYR-ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFN 364
+DYR ++ +LA PP ++ E+++ +P + + P P++ V PAL NG +TF SFN
Sbjct: 840 MDYRLLSSTLASPPGMTEQFTEQILWVPMRKI-FEPHPQSPDVNSLPALRNGHLTFASFN 898
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD----SVRHRFLSTL----EQLGLES 416
K+ VL++WA+IL P+++L++ F D ++ R L+ EQL +
Sbjct: 899 RPKKVNDDVLELWAQILVREPSAKLLMG---FMADDEMIAMMTRRLTHFGARPEQLIFRT 955
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R L+ ++++ + +DI LD FPY G TTT +MGVP +T+ G A G
Sbjct: 956 -RTGLI-------EYLEYHHHIDILLDAFPYTGGTTTNHGAWMGVPTLTLCGETMAGRQG 1007
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV--CDGQNFAL 534
V ++ GL +A ++ +YV+ AL L +R+S+R S+ P DG A
Sbjct: 1008 VDIMNGYGLPEFVANDKADYVEKALSWQGRFEELNAIRLSMR---SRIPTDNADGFRVAD 1064
Query: 535 GLESTYRNMWHRYCKGDVP 553
E R W YC G+ P
Sbjct: 1065 TFEKGLREAWKIYCTGEAP 1083
>gi|260886625|ref|ZP_05897888.1| putative tetratricopeptide repeat-containing domain protein
[Selenomonas sputigena ATCC 35185]
gi|330839543|ref|YP_004414123.1| hypothetical protein Selsp_1708 [Selenomonas sputigena ATCC 35185]
gi|260863768|gb|EEX78268.1| putative tetratricopeptide repeat-containing domain protein
[Selenomonas sputigena ATCC 35185]
gi|329747307|gb|AEC00664.1| hypothetical protein Selsp_1708 [Selenomonas sputigena ATCC 35185]
Length = 701
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 211/372 (56%), Gaps = 17/372 (4%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYH-DYQNYKVVVYSAVVKADAKTIRFRE 236
T+ R L IGY+SPD+ H+ +YF PLV D +++V Y A K D T FR+
Sbjct: 337 RTRTFSRKLRIGYISPDFRLHAAAYFF-MPLVRDFDAASFEVTCY-ARGKRDRVTSLFRQ 394
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
K G W+DI + + A ++ D IDILV+L GHT + L ++A +PAPVQ+T IG
Sbjct: 395 K----GVRWKDISRLSARDAARLIERDGIDILVDLAGHTQGSGLPVLARRPAPVQLTAIG 450
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHV-EELIRLPECFLCYTP----SPEAGPVCPTP 351
Y TTGL +DY ++D P + + E+++R+P LCY P P++G P
Sbjct: 451 YMATTGLRAVDYFLSDIYCSPWDMGARGFSEKVLRMPHSHLCYVPVLRDMPKSG--GEAP 508
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
+ NG+ITFGSFNN +K++ +L +W +L + +RLVVK K + R L++
Sbjct: 509 FVRNGYITFGSFNNFSKVSDDMLALWRGVLERMKGARLVVKSKICSIAAGRKIVKERLQR 568
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
G+ +V+L P + D+++ Y+ +DI+LDTFPY G TTCE+LYMGVP +T AG H
Sbjct: 569 FGIPFAQVELRPY---SPDYLEQYTDIDIALDTFPYTGGVTTCEALYMGVPVITKAGGTH 625
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
S+L GL L+A+ + EYV+ A++LA L L LR M SP+ D +
Sbjct: 626 GSRFSTSILENAGLSQLVARGDMEYVRKAVELADSPDILCRLHRDLRARMETSPLMDVKG 685
Query: 532 FALGLESTYRNM 543
+ LE YR +
Sbjct: 686 YMKDLEDIYREI 697
>gi|148254947|ref|YP_001239532.1| SPINDLY family O-linked N-acetylglucosamine transferase
[Bradyrhizobium sp. BTAi1]
gi|146407120|gb|ABQ35626.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. BTAi1]
Length = 742
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 168/548 (30%), Positives = 272/548 (49%), Gaps = 7/548 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ GVA + FD A+ A NP+ A G +Y++ +A + AL+
Sbjct: 196 LFGKGVASMYLRDFDAALAALNTALAINPNAAAVIAQRGRVYQELGRFTEAEAEFDAALA 255
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P +L V G + A +I K +A NP A+ LGV G I+ AI
Sbjct: 256 LEPLLDAALCGKATVTLANGNLALAISVINKVLAQNPNSEIAWTLLGVCSAMQGDIATAI 315
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+ Y++ L I P+ +A ++ A++++ + + L E R W + + +
Sbjct: 316 EHYDRALAIRPNHEDAITKKIFALDFMPDIGVEHLQEVRRYWWEAIGSRLERRSLGKRDL 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+R LV+GYVS D+ HS + L +HD ++++ YS DAKT R V +
Sbjct: 376 DPDRRLVVGYVSSDFRDHSAALAFLPILQHHDRTKFEILAYSCSPMKDAKTELCRSLVDR 435
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W D + ++A ++ DK+DILV+L+GH+A ++L M A +PAP+QV+ +G
Sbjct: 436 ----WVDASLWSDDRLADQIQADKVDILVDLSGHSAGHRLTMFARKPAPIQVSAVGSVTG 491
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP +DY + D + P + E + LP L P P P P L NG +TF
Sbjct: 492 TGLPVMDYLLADPVVIPATVRHLFAERIYDLPS--LITIEPPPPIPPSPLPMLRNGHVTF 549
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
G+FN + K++ L++W++++ A P S +VVK +R ++ G+ + RV
Sbjct: 550 GAFNRIDKLSEPTLRLWSKLMAATPGSMIVVKNHSMGDALLRDGLIARFVAHGIAADRV- 608
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ +H+ ++ +DISLD FP G +T ESL MGVP V GS A G ++L
Sbjct: 609 ICAGKTTRLEHLAMFAEIDISLDPFPQNGGISTWESLQMGVPVVAKLGSGPAARAGGAIL 668
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T +GL +A +++ Y+ AL S LA LR +L ++ S + + +E Y
Sbjct: 669 TAIGLDEWVADDDEGYLATALNFCSRPDELAALRAALPAIVLNSAAGNSALYTAHVEKAY 728
Query: 541 RNMWHRYC 548
R WH +C
Sbjct: 729 RTFWHDHC 736
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV+ + +FD A++ A +P AEA ++LG+ ++A Y+ A++
Sbjct: 60 LHLLGVSERDSGRFDEAVLVLTRAIESDPRSAEAQSDLGLALFRLGRYEEARARYERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PNF +L +LG + + A ++AIA P Y EA+ N G+ A
Sbjct: 120 LRPNFPAALTHLGNTLMNLFRFEEAISAHDRAIALKPDYGEAHANRGMALMFTSRNGEAA 179
Query: 121 DAYEQCLKIDP 131
+++++ L + P
Sbjct: 180 ESFDRALSLQP 190
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV 78
+ +L HF A + LGV +D D+AV A+ P +++ ++LG+
Sbjct: 49 ILQDLPSHFG-----ALHLLGVSERDSGRFDEAVLVLTRAIESDPRSAEAQSDLGLALFR 103
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
G+ + A E+AIA P + A +LG + AI A+++ + + PD A
Sbjct: 104 LGRYEEARARYERAIALRPNFPAALTHLGNTLMNLFRFEEAISAHDRAIALKPDYGEAHA 163
Query: 139 NRLLAMNYINE 149
NR +A+ + +
Sbjct: 164 NRGMALMFTSR 174
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 51/106 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG+A + +++ A YE A P+ A +LG + ++A+ + A+++K
Sbjct: 96 DLGLALFRLGRYEEARARYERAIALRPNFPAALTHLGNTLMNLFRFEEAISAHDRAIALK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
P++ ++ N G+ + AAE ++A++ P A GV
Sbjct: 156 PDYGEAHANRGMALMFTSRNGEAAESFDRALSLQPRLLTALFGKGV 201
>gi|146338585|ref|YP_001203633.1| O-linked N-acetylglucosamine transferase [Bradyrhizobium sp. ORS
278]
gi|146191391|emb|CAL75396.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 278]
Length = 741
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 266/549 (48%), Gaps = 9/549 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M N G+A+ E+ F++A + A P AE + G +Y + D A + A+
Sbjct: 195 MVNKGLAHLELHHFELAEAIFNAALAARPMHAELLAHRGRLYMLSGHTDAAEADFDAAVR 254
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + ++G + AA + + ANP A LG G ++ A+
Sbjct: 255 LDPQLQLGWQGKAQISILKGNIAAAMAACRRVLDANPAAQTALTLLGACLGRLGDVAGAV 314
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD-WGKRFMRLYSQYTSWDNT 179
++Q L + PD A ++ +++++ G D + +A R W + + T +
Sbjct: 315 ARFDQALAVQPDYDEAITKKIFYLDFLS-GADFAVQQATRKYWWVAVGSKFPRRTLAPRS 373
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
DP R +V+GYVS D+ HS ++ L HD +V YSA + D T +F+
Sbjct: 374 LDPNRRIVVGYVSADFRMHSAAFAFLPVLRGHDKSQLQVNCYSASPRHDDFTAQFK---- 429
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+W + + + ++A ++ D +DILV+L+G+T ++ + A +PAP+QVT G
Sbjct: 430 AIADVWVEAANLSDDELADRIQADGVDILVDLSGYTTGTRMPVFARKPAPIQVTAWGSGT 489
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TGL T+DY D + P + E + LP + P + P P P L NG +T
Sbjct: 490 GTGLETMDYFFADPVTVPENVRPLFAEHVHDLPSV-ITIDPLLDIRP-SPLPMLQNGHVT 547
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FG +N + KI+ + + +WAR+L VP++ LV+K VR +S G+ R+
Sbjct: 548 FGVYNRIDKISDEAIALWARLLAEVPDADLVIKHLALNDPMVRDGLISRFVSRGVPEARL 607
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
L +H+++Y +DISLD FP G +T ESLYMGVP V G A +
Sbjct: 608 VCLG-ASERSEHLRSYDRIDISLDPFPQNGGISTFESLYMGVPVVAKLGLGAASRAAGGI 666
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
LT GL +A ++D Y+++A A+ LA LR L ++++SP D N+ +E+
Sbjct: 667 LTAAGLPDWVAADDDGYIRIAKTFAAQPELLAKLRAELPGMVARSPAGDVANYTRCVEAG 726
Query: 540 YRNMWHRYC 548
YR W YC
Sbjct: 727 YRQFWQTYC 735
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LGV+ +F A F A P+ A+A +NLG + + ++A + +L+
Sbjct: 59 MHLLGVSLVSSARFAEAATFLAQAVALEPNSADAHSNLGWALVNCERYEEARASLERSLA 118
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
++PN +L NL + K +AA +A+ P ++++N V
Sbjct: 119 LRPNAPITLRNLTIALLRLKKGEAALANAVRALELKPDDVDSWSNRAV 166
>gi|365891967|ref|ZP_09430321.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3809]
gi|365332037|emb|CCE02852.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3809]
Length = 739
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 259/531 (48%), Gaps = 26/531 (4%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL---NNLGVVYTVQGKMD 83
P + G +++ D+A+ Y+ AL+ P +L LG + ++
Sbjct: 222 IKPGAPQVLAQRGRVHQMSGRFDQAMADYEAALAQDPTLEVALLGKAQLGHFKDIAWSVN 281
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
A +++E+ NP +A+ LG+ Y G I+ AI +++ L I PD A ++
Sbjct: 282 ACRKILEQ----NPRSQDAWLWLGICYAKQGEIAEAIAHFDRALDIKPDFAEAMTAKIFT 337
Query: 144 MNYINEGHDDKLFEA-HRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSY 202
+ ++ G D +L +A R+W +R ++ + DPER L IGYVS D+ HS +
Sbjct: 338 LEFM-PGSDFELHQAVRREWWERIGSHIARRSPPPRDLDPERRLTIGYVSSDFRNHSAAL 396
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
L + Q +++ Y+ DA T +F+ +W D + + ++A V
Sbjct: 397 TYLPVLKHASRQEFRICCYACSPVLDAVTAQFQ----SCADVWVDATQMSDDELAERVEA 452
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
D +DILV+L+GH+A N+L + A +PAP+QVT G TGLPTIDY D + P +
Sbjct: 453 DGVDILVDLSGHSAGNRLPLFARKPAPIQVTAWGSGTGTGLPTIDYFFADPVTVPEAARP 512
Query: 323 KHVEELIRLP-----ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
E++ LP E TP+P P L NGF+TFG FN L KIT L VW
Sbjct: 513 LFAEQVHDLPAVITTEALPGLTPTP-------LPMLRNGFVTFGVFNRLDKITEPTLAVW 565
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
R++ +P+SR+V+K +R R L+ G+ R+ L Q ++
Sbjct: 566 TRLMRELPDSRIVIKSGSLDDPVLRDRLLARFAAHGVTQDRITCLGWSTREQQIAQ-FAQ 624
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
+DISLD FP G +T ESL GVP + G+ A +++T VGL +A++++ Y+
Sbjct: 625 VDISLDPFPQNGGVSTWESLQAGVPVIARLGASAASRAAAAIVTAVGLGGWVAEDDEGYI 684
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+A + + LA LR L ++ S + +A +E YR W RYC
Sbjct: 685 AIATRWPAQPAELATLRAELPARVANSAAGNVATYARKVEEAYRLFWRRYC 735
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV + + D+A A P AEA +NLG+ +R D+A +C + A++
Sbjct: 60 LHLLGVTALDGGQLDLAEQALTKAVEIEPRHAEALSNLGLALFNRKRYDEARKCQERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPN + LG G + A ++AIA YA+A+ N G+ G + A
Sbjct: 120 VKPNLLVAQTGLGNTLMRLGLPEEAIAAHDRAIALKRDYADAHCNRGMALIPLGRNAEAT 179
Query: 121 DAYEQCLKIDP 131
++++ L ++P
Sbjct: 180 HSFDRALSLNP 190
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LGV D LD A + A+ I+P +++L+NLG+ + + D A +
Sbjct: 54 PDHFDALHLLGVTALDGGQLDLAEQALTKAVEIEPRHAEALSNLGLALFNRKRYDEARKC 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
E+AIA P A LG G AI A+++ + + D +A NR +A+
Sbjct: 114 QERAIAVKPNLLVAQTGLGNTLMRLGLPEEAIAAHDRAIALKRDYADAHCNRGMAL 169
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 32 AEACNNLGVIYKDRDNLD----KAVECYQMA------------LSIKPNFSQSLNNLGVV 75
+ A N ++ K R ++D +AV Y+ L++ P+ +L+ LGV
Sbjct: 7 SRAFQNARLLKKHRKHVDDLMPRAVAAYRAGRRAEAQAICGQILALLPDHFDALHLLGVT 66
Query: 76 YTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G++D A + + KA+ P +AEA +NLG+ + A E+ + + P+
Sbjct: 67 ALDGGQLDLAEQALTKAVEIEPRHAEALSNLGLALFNRKRYDEARKCQERAIAVKPN 123
>gi|402833905|ref|ZP_10882513.1| glycosyltransferase family 41 domain protein, partial [Selenomonas
sp. CM52]
gi|402279373|gb|EJU28160.1| glycosyltransferase family 41 domain protein, partial [Selenomonas
sp. CM52]
Length = 592
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 163/488 (33%), Positives = 248/488 (50%), Gaps = 55/488 (11%)
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA---GQNRLLAMNYIN-------- 148
AE+Y+ G AGS + + A+ +++ D A N L A+NY+
Sbjct: 121 AESYSLRGSALTLAGSAAEGVHAFLVASRMEADEAQAIAEYSNALFALNYVAVEERAPFA 180
Query: 149 ---EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIE 205
EG D A R R +++ L IGY+SPD H V++F+
Sbjct: 181 GLAEGFDGFFSAAERMAHTRARHAHAR-------------LRIGYISPDLRRHPVAFFVL 227
Query: 206 APLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKI 265
L D + ++V Y A DA + R + G W +I G+ ++ A +V D+I
Sbjct: 228 PLLRAFDRERFEVFCY-ANNSEDAVS---RTMAQQPGVHWTNILGLLPEEAARLVAADEI 283
Query: 266 DILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL----------- 314
DIL +L+GHT +N L ++A +PAPVQVT +GY TGL TIDY + D +
Sbjct: 284 DILCDLSGHTKDNCLAVLARKPAPVQVTGLGYMGPTGLSTIDYLLGDRVLDAAEEAEDAA 343
Query: 315 ----------ADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFN 364
T+++ E + L CY P V P P L+ G++TFG FN
Sbjct: 344 AERCRLAVEDGASQGTREERSERPLSLQHSHFCYLPFVAMPDVAPPPCLSRGYVTFGCFN 403
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
N +K+T +L +W ++L VP++RL++K +PF + R + E+LGL++ R++L
Sbjct: 404 NYSKVTDAMLLLWWQLLLDVPDARLLLKSRPFGSEEGRSLAVERFERLGLDASRIELRGF 463
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
+ D++ Y+ MDI+LDT PY G TTCE+LYMGVP VT+ G H G SLL G
Sbjct: 464 ---SSDYLAEYADMDIALDTAPYTGGLTTCEALYMGVPVVTLKGGTHGARFGASLLQNAG 520
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
L LIA++ +YV++A LAS L LR RD++ SP+ + + + +E+ Y +W
Sbjct: 521 LPELIAEDAAQYVEIAKLLASSPETLQMLREKQRDMLLASPLMNFRQYVQEVEAAYEKVW 580
Query: 545 HRYCKGDV 552
R+ GD+
Sbjct: 581 RRWMGGDM 588
>gi|402832764|ref|ZP_10881393.1| glycosyltransferase family 41 domain protein [Selenomonas sp. CM52]
gi|402282247|gb|EJU30805.1| glycosyltransferase family 41 domain protein [Selenomonas sp. CM52]
Length = 703
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 211/372 (56%), Gaps = 17/372 (4%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYH-DYQNYKVVVYSAVVKADAKTIRFRE 236
T+ R L IGY+SPD+ H+ +YF PLV D +++V Y A K D T FR+
Sbjct: 339 RTRTFSRKLRIGYISPDFRLHAAAYFF-MPLVRDFDAASFEVTCY-ARGKRDRVTSLFRQ 396
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
K ++ W+D+ + + A ++ D IDILV+L GHT + L ++A +PAPVQ+T IG
Sbjct: 397 KRVQ----WKDVSRLSARDAARLIERDGIDILVDLAGHTQGSGLPVLARRPAPVQMTAIG 452
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHV-EELIRLPECFLCYTP----SPEAGPVCPTP 351
Y TTGL +DY ++D P + + E+++R+P LCY P P++G P
Sbjct: 453 YMATTGLRAVDYFLSDIYCSPWDMGARGFSEKVLRMPHSHLCYAPVLRDMPKSG--GEAP 510
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
+ NG+ITFGSFNN +K++ +L +W +L + +RLVVK K + R L++
Sbjct: 511 FVKNGYITFGSFNNFSKVSDDMLALWRGVLERMKGARLVVKSKICSIAAGRKIVKERLQR 570
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
G+ +V+L P + D+++ Y+ +DI LDTFPY G TTCE+LYMGVP +T AG H
Sbjct: 571 FGIPLAQVELRPY---SPDYLEQYTDIDIVLDTFPYTGGVTTCEALYMGVPVITKAGGTH 627
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
S+L GL L+A+ + EYV+ A++LA L L LR M SP+ D +
Sbjct: 628 GSRFSTSILENAGLSQLVARGDMEYVRKAVELADAPDILRRLHRDLRARMEASPLMDAKG 687
Query: 532 FALGLESTYRNM 543
+ LE YR +
Sbjct: 688 YMKDLEDIYREI 699
>gi|334126612|ref|ZP_08500561.1| TPR domain/SEC-C domain protein [Centipeda periodontii DSM 2778]
gi|333391283|gb|EGK62401.1| TPR domain/SEC-C domain protein [Centipeda periodontii DSM 2778]
Length = 548
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 261/528 (49%), Gaps = 33/528 (6%)
Query: 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA 92
EA L ++ + +A+ ++ ++ P+ ++ +Y ++G+ AA + +
Sbjct: 39 EAAGLLTALHIEAKCAQEALAAWRECAALAPDDPYTIFLRARIYLLEGERVAARKALTPL 98
Query: 93 IAAN--PTYAE-AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
I A+ P AE YN G R G A+ YE+ PD LA+ +N
Sbjct: 99 IDASMPPAIAEKVYNLAGQCARFLGDAEDAVKFYERARDAAPD---------LALRALNA 149
Query: 150 GHDDKLFEAH---------RDWGKRFMRLYSQYTSWDNTKD-PERPLVIGYVSPDYFTHS 199
+ LF H + + + L + +D+T+ + L IGY+SPD H
Sbjct: 150 --SNVLFNRHYLPATLAEDKRAAEEYGALCADVHPFDHTEHRAGKRLRIGYLSPDVREHV 207
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
V F A + D ++V VY A+ DA T + R+ V +R++ ++ A
Sbjct: 208 VLSFSYALMTALDRSRFEVTVY-ALNAEDAYTEKVRQSVEH----FRNLGQRSAEEAAHT 262
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE 319
+ D IDILVEL GHTA L ++A +PAPVQ++ IGY +TGLPT+DY + D +
Sbjct: 263 IYRDGIDILVELAGHTAGMTLPILAYRPAPVQISGIGYFASTGLPTVDYFLADPVLAEGN 322
Query: 320 TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
+ VEEL+ LP C+ P A PA G + FGSFNN K+ +VL+ WA
Sbjct: 323 AEAGFVEELLVLPHSHFCWQPLHAAPVPAHAPAAGRG-VVFGSFNNFTKLNDRVLRTWAE 381
Query: 380 ILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMD 439
IL VP SRL +K F R L + + G+ RVD + D++ AY+ +D
Sbjct: 382 ILRRVPESRLFLKTDVFSYADARAEVLHRMGEAGIPLDRVDTEGS---SKDYLAAYNRVD 438
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
I+LD FPY G TTC++LYMGVP VT+AG+ G SLL VG L+A+ E+EY+ L
Sbjct: 439 IALDPFPYPGGGTTCDALYMGVPVVTLAGASLGSRFGASLLENVGAGALVARAEEEYIAL 498
Query: 500 ALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
A+ LA D L L LR +M SPV D + + + Y +W Y
Sbjct: 499 AVSLAGDADILDALHAGLRRMMESSPVMDAVGYGAAVGAAYEQLWSAY 546
>gi|429736728|ref|ZP_19270616.1| tetratricopeptide repeat protein [Selenomonas sp. oral taxon 138
str. F0429]
gi|429154356|gb|EKX97090.1| tetratricopeptide repeat protein [Selenomonas sp. oral taxon 138
str. F0429]
Length = 1079
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 170/480 (35%), Positives = 244/480 (50%), Gaps = 17/480 (3%)
Query: 75 VYTVQGKMDAAAEMIEKAI-AANPT--YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+Y ++G A+ E++E I A PT + YN G R G + A+ YE+ P
Sbjct: 81 IYLLEGARCASLEVLEPLIDAPMPTEIAEKVYNLAGQCARFLGRAAEAVSCYERARDAAP 140
Query: 132 DSRNAGQNRLLAMNYI-NEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE-RPLVIG 189
D N A N + N + E R + L++ +D+T R L IG
Sbjct: 141 DLALKALN---ASNVLFNRHYLPATLEEDRGAASEYGALFATVRQFDHTAHRRGRRLRIG 197
Query: 190 YVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIY 249
Y+SPD H V F A + D ++V VY A+ DA T EKV +R++
Sbjct: 198 YLSPDVREHVVLSFSYALMTALDPARFEVAVY-ALNAEDAYT----EKVKASVEHFRNLA 252
Query: 250 GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR 309
+ ++ A ++ DKIDILV+L GHTA L ++A +PAPVQ++ IGY +TGL T+DY
Sbjct: 253 RLSAEEAAQVICRDKIDILVDLAGHTAGRTLPILAYRPAPVQISGIGYFASTGLSTVDYF 312
Query: 310 ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKI 369
+ D + + ++ VEEL+ LP+ C+ P A V PA T I FGSFNN K+
Sbjct: 313 LADPILAAGDAEKGFVEELLVLPQTHFCWQPLHTAPAVDHAPA-TGRSIIFGSFNNFTKL 371
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429
+VL+ WA IL V SRL++K F R + +E G+ + VD +
Sbjct: 372 NDEVLRAWAEILHRVEGSRLLLKADVFSYADARAEVMQRIEAAGIPLVCVDTEGA---SR 428
Query: 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLI 489
D++ AY+ MDI+LD FPY G TTC++LYMGVP VTM G G SL+ +G LI
Sbjct: 429 DYLAAYNRMDIALDPFPYPGGGTTCDALYMGVPVVTMRGESLGSRFGASLVENIGAGALI 488
Query: 490 AKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
A+ +EY+ A+ LA D L L LR +M SPV D + + + Y +W Y +
Sbjct: 489 AQTTEEYIDRAVSLARDTELLDALHAGLRGMMETSPVMDVAAYGSAVGAAYAQVWAAYAE 548
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 250/484 (51%), Gaps = 27/484 (5%)
Query: 79 QGKMDAAAEMIEKAIAANPT-YAEAYNNL--GVLYRDAGSISLAIDAYEQCLKIDPDSRN 135
QG + A E+ E+ +A T + L V YR G + A + Y+ +P
Sbjct: 614 QGDLPRAMELTEEYLATGRTDLRHEFMRLRAAVAYR-VGDVR-AAEYYKCAYDEEPSDMG 671
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRL--YSQYTSWDNTKDPERPLVIGYVSP 193
+ LLA N D+LF AH +G F + Y+ + + K + IGY+SP
Sbjct: 672 LYSSFLLAQN-AQAVDADELFRAHCAYGTLFADIPCYTYAAPYQHGK-----IRIGYISP 725
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDE 253
D+ + + +F++ L +D+ +++V VYS D T R V +WRD+
Sbjct: 726 DFRRNVLQHFVQPLLTAYDHAHFEVYVYSTAENPDEVTAALRPYVT----VWRDLAEDPP 781
Query: 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS 313
+K+AA + D+ID+LV+L GH + L ++A +PAPVQ+ +GY T+GL T+DY +TD
Sbjct: 782 EKIAARIHADEIDVLVDLAGHASGGALPVLARRPAPVQMMGLGYTATSGLETVDYFLTDG 841
Query: 314 LADPPE--TKQKHVEELIRLPECFLCYTPSPEAGPVCPT--PALTNGFITFGSFNNLAKI 369
DP +++ E+LIRLP F+ P AG PT PA G I FG FN K
Sbjct: 842 FCDPVGGVSERYFTEKLIRLPSQFVYV---PRAGLPAPTGTPARQRGHILFGVFNQYRKF 898
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429
T ++L +W I+ +P S+L++K + F ++ LE+LG + RV L P
Sbjct: 899 TDEMLLLWREIMERMPTSKLLLKSQIFFAPAMVEAARMRLERLGFDLTRVILEPA---TT 955
Query: 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLI 489
D+M+ Y +DI+LDT+P+ G TTC++LYMGVP VT+ G + +LLT VGL+ L
Sbjct: 956 DYMERYLDVDIALDTYPWPGGGTTCDALYMGVPVVTLYGERRSTRFSYALLTHVGLEELA 1015
Query: 490 AKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
++ +YV A+ LA D+ L L + LR M S + D + + LE Y N +
Sbjct: 1016 VQSSADYVAYAVTLAGDLDRLDQLHIGLRARMEGSAIMDQEGYMRALERAYVNALKDWSA 1075
Query: 550 GDVP 553
+ P
Sbjct: 1076 EERP 1079
>gi|330799147|ref|XP_003287609.1| hypothetical protein DICPUDRAFT_151710 [Dictyostelium purpureum]
gi|325082395|gb|EGC35878.1| hypothetical protein DICPUDRAFT_151710 [Dictyostelium purpureum]
Length = 684
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 171/506 (33%), Positives = 263/506 (51%), Gaps = 39/506 (7%)
Query: 71 NLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
NL +Y QGK + +++ + + P + EA+ NL L AI + LK+
Sbjct: 178 NLSNLYEKQGKFQMSIDLLNRILKKEPFHWEAHYNLAALEHKNSLTEKAI----KRLKLI 233
Query: 131 PDSRNAGQNR--------LLAMNYINEGHDDK-----LFEAHRDW--GKRFMRLYSQYTS 175
+S +A +N+ L MN++ + D+ ++E H + K R ++ +
Sbjct: 234 INSNSASENQKHKSHLLLLFYMNFVERYNCDQDKGKSIYEEHLKYYNDKLLKRHHNTIKA 293
Query: 176 WDNTKD------PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ--NYKVVVYSAVVKA 227
+K+ + P+ I Y+S + H ++YFI L H+ Q + ++ +
Sbjct: 294 LQFSKEEIAKYSKQSPIKIAYLSNHFHQHPIAYFIMGLLESHNRQLFDIHIIQIDNGGQD 353
Query: 228 DAKTIRFREKVMKKGGIWRDI--YGIDE--KKVAAMVREDKIDILVELTGHTANNKLGMM 283
D T R R +K W I I E ++ +RE +I I V L HT + ++
Sbjct: 354 DNFTKRIR-GFIKNEKNWIKIPESLISEYPHLLSQSIREKEISIAVSLDMHTEKHA-ELL 411
Query: 284 ACQPAPVQVTWIGYPNTTGL-PTI-DYRITDSLADPPETKQKHVEELIRLPECFLCYTPS 341
+ AP+Q+ ++GYPN++G+ P+I YRITD ADP T+Q E LIRLP+ FL + PS
Sbjct: 412 VNRIAPIQINYLGYPNSSGIDPSILQYRITDEHADPITTEQPFTETLIRLPKTFLNFDPS 471
Query: 342 --PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD 399
P P TNGFITFG +N L+KI P L +W RI +P ++++K F +
Sbjct: 472 HLPPVHQNIKCPFETNGFITFGCYNTLSKIQPCTLTLWKRIQDKLPTCKILIKSPLFILE 531
Query: 400 SVRHRFLSTL-EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLY 458
S + +L TL ++ + RV L P + H +YS MDISLDTFPY GTTT+ +SLY
Sbjct: 532 SSCNDYLGTLKDEYHFDISRVILKPYSFDTNSHYLSYSDMDISLDTFPYNGTTTSFDSLY 591
Query: 459 MGVPCVTMAGSVHAHNVGVSLLTKV-GLKHLIAKNEDEYVQLALQLASDVTALANLRMSL 517
MGVP +T++G H H+VG S+L + L LIA D+Y +A+ LAS L LR +L
Sbjct: 592 MGVPFITLSGPTHVHSVGKSILNNIPSLSDLIAATNDQYADIAVSLASSPDRLKYLRNNL 651
Query: 518 RDLMSKSPVCDGQNFALGLESTYRNM 543
R L+S SP+ + + F L E Y+ +
Sbjct: 652 RSLLSNSPLSNSKQFTLNFEKVYKEI 677
>gi|365881007|ref|ZP_09420342.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 375]
gi|365290871|emb|CCD92873.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 375]
Length = 743
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/553 (29%), Positives = 268/553 (48%), Gaps = 17/553 (3%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M N G+A+ E+ F++A + A P AE + G +Y D A + A++
Sbjct: 195 MVNKGLAHLELHHFELAEATFNTALAARPAHAELRAHRGRLYMLSGQTDAAEADFDAAVT 254
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + ++G + A + + ANP A LG G I+ A+
Sbjct: 255 LDPQLQLGWQGKAQISILKGNVAQAMAACRRVLDANPAAQTALTLLGACLGRLGDIAGAV 314
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD-WGKRFMRLYSQYTSWDNT 179
++Q L + PD A ++ ++++ G D + +A R W + + +
Sbjct: 315 AQFDQALAVQPDYDEAITKKIFYLDFL-PGADFAVQQATRQYWWVAVGSKFPRRKLAPRS 373
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
DP R +V+GYVS D+ HS ++ L HD +V YSA + D T +F+
Sbjct: 374 LDPARRIVVGYVSADFRMHSAAFAFLPVLRGHDKTQVQVNCYSASPRHDEFTAQFK---- 429
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+W + + + ++A ++ D +DILV+L+G+T ++ + A +PAP+QVT G
Sbjct: 430 SIADVWVEAANLSDDELADRIQADGVDILVDLSGYTTGTRMPVFARKPAPIQVTAWGSGT 489
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TGL T+DY D + P + E++ LP + P + P P P L NG +T
Sbjct: 490 GTGLATMDYFFADPVTVPENVRPLFAEQVHDLPSV-ITIDPLLDI-PPSPLPMLQNGHVT 547
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVK----CKPFCCDSVRHRFLSTLEQLGLE 415
FG +N + KI+ + + +WAR+L VP+++LV+K P D + RF+S G+
Sbjct: 548 FGVYNRIDKISDEAIALWARLLTEVPDAQLVIKHLALNDPLVRDGLISRFVSA----GVP 603
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ L +H+++Y +DISLD FP G +T ESLYMGVP V G A
Sbjct: 604 EARLLCLG-ASERSEHLRSYERIDISLDPFPQNGGISTFESLYMGVPVVAKLGLGAASRA 662
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
+LT GL +A ++D Y+++A A+ LA LR L ++++SP D N+
Sbjct: 663 AGGILTAAGLADWVAADDDGYIRIAKSFAAQPELLAKLRAELPGMVARSPAGDVANYTRS 722
Query: 536 LESTYRNMWHRYC 548
+E+ YR W YC
Sbjct: 723 VEAGYRQFWQAYC 735
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LGV+ +F A F A P+ A+A +NLG + + ++A + +L+
Sbjct: 59 MHLLGVSLVSSARFADATTFLTQAVALEPNSADAQSNLGWALVNCERYEEARAALERSLA 118
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
++PN +L NL + + +AA +A+ P ++++N V
Sbjct: 119 LRPNAPITLRNLTITLLRLKQGEAALANAVRALELKPDDVDSWSNRAV 166
>gi|429104185|ref|ZP_19166159.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter turicensis 564]
gi|426290834|emb|CCJ92272.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter turicensis 564]
Length = 1116
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/499 (32%), Positives = 252/499 (50%), Gaps = 35/499 (7%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N+LG +Y +G M A + +A P +GV+ D + A E+ L+I
Sbjct: 631 NSLGTLYHARGDMTLAEKCAREAFRFQPRNPRYLAMMGVVLSDNQKLDEARYFLEKSLEI 690
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWD----NTKDPERP 185
P + + L + + N +L HR++G+R + ++ + D N KDP R
Sbjct: 691 APQDFDCFTSLLFVLTHDNRVSAQELLAKHREYGER-VTAHAVRCALDLPLNNVKDPNRK 749
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +G+VS D TH VS F+ D +++V Y+A D T R + +W
Sbjct: 750 LRVGFVSGDLRTHPVSNFLLPFWESFDRTQFELVGYNAAPMHDEVTDHLRAGAV----LW 805
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
RD Y + ++++A + +D +DIL++L+GHT +L M A +PAP+Q+TWIGYP TTG+P
Sbjct: 806 RDAYQLSDRELARQINDDGVDILIDLSGHTTWTRLPMFALRPAPLQMTWIGYPGTTGVPA 865
Query: 306 IDYR-ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFN 364
+ YR ++ +LA PP ++ E+++ +P + P P++ V PAL NG +TF SFN
Sbjct: 866 MHYRLLSSTLASPPGMTEQFTEQILWVP-MRKIFEPHPQSPDVNSLPALRNGHLTFASFN 924
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS------VRH--RFLSTLEQLGLES 416
KI VL++WA+IL P+++L++ F D R RF + EQL +
Sbjct: 925 RPKKINDDVLELWAQILVREPSAKLLMG---FMADDEMIAMMTRQLTRFGARPEQLIFRA 981
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R L+ ++++ + +DI LD FPY G TTT +MGVP +T+ G A G
Sbjct: 982 -RTGLI-------EYLEYHHHIDILLDAFPYTGGTTTNHGAWMGVPTLTLCGETMAGRQG 1033
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV--CDGQNFAL 534
V + GL +A ++ +YV AL L +R+S+R S+ P DG A
Sbjct: 1034 VETMNSYGLPEFVANDKADYVDKALSWQGRFEELNAIRLSMR---SRIPTDNADGFRVAD 1090
Query: 535 GLESTYRNMWHRYCKGDVP 553
E R W YC G+ P
Sbjct: 1091 TFEKGLREAWKIYCTGEAP 1109
>gi|367476803|ref|ZP_09476177.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 285]
gi|365270886|emb|CCD88645.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 285]
Length = 740
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/558 (29%), Positives = 266/558 (47%), Gaps = 27/558 (4%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G+A+ E+ F+ A + A P AE + G +Y A Y A++
Sbjct: 195 LVNKGLAHLELHHFEQAEATFNTALAARPMHAELLAHRGRLYMISGRTADAEADYDRAVA 254
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ PN + + G + A ++ + NP A LG G ++ A+
Sbjct: 255 LDPNLQVGWQGKAQISLLNGNIAQAIAACKRVLDTNPKAQVALTLLGACRGKLGDVAGAV 314
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD-WGKRFMRLYSQYTSWDNT 179
++Q L++ PD A ++ ++++ G D + +A R W + + T +
Sbjct: 315 AQFDQALEVQPDYDEAITKKIFYLDFL-PGADFAVQQAARHYWWVAIGSKFPRRTLAPRS 373
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
DP R +V+GYVS D+ THS ++ L HD +V YS + DA F E
Sbjct: 374 LDPIRRIVVGYVSADFRTHSAAFAFLPVLRGHDKTQVQVNCYSTSPRHDA----FTENFK 429
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+W + + + ++A ++ D +DILV+L+G+T ++ + A +PAP+QVT G
Sbjct: 430 SIADVWVEAANLSDDELADRIQADGVDILVDLSGYTTGTRMPVFARKPAPIQVTAWGSGT 489
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPEC-----FLCYTPSPEAGPVCPTPALT 354
TGL T+DY D + P + E + LP L TPSP P L
Sbjct: 490 GTGLATMDYFFADPVTVPASVRPLFAERVHDLPSVITIDPLLGVTPSPP-------PMLQ 542
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK----CKPFCCDSVRHRFLSTLE 410
NG +TFG +N + KI+ + + +WAR+L VP+++LV+K P D + RF+S
Sbjct: 543 NGHVTFGVYNRIDKISDEAIVLWARLLAEVPDAKLVIKHLALNDPLVRDGLIGRFVSR-- 600
Query: 411 QLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSV 470
G+ R+ L +H+++Y +DISLD FP G +T ESLYMGVP V G+
Sbjct: 601 --GVPEARLVCLG-ASERSEHLKSYERIDISLDPFPQNGGISTFESLYMGVPVVAKLGAG 657
Query: 471 HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQ 530
A +LT GL + ++D Y+++A A+ L+ LR L ++++SP D
Sbjct: 658 AASRAAGGILTAAGLADWVGDDDDGYIRIAKTFAAQPELLSKLRAELPGMVARSPAGDVA 717
Query: 531 NFALGLESTYRNMWHRYC 548
N+ +ES YR W YC
Sbjct: 718 NYTRCVESAYRQFWQTYC 735
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGV+ +F A F A P+ A+A +NLG + + ++A + +L+++P
Sbjct: 62 LGVSLVSSARFAEATTFLAQAVALEPNSADAQSNLGWALVNCERFEEARAALERSLALRP 121
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV----LYRDAGSISLA 119
N +L NL + + +AA +A+ P +++ N V L R G+ + A
Sbjct: 122 NAPITLRNLTITLLRLKQGEAALASATRALELKPDDVDSWCNRSVAELMLRRWDGAAASA 181
Query: 120 IDAYEQCLKIDPDSRNAGQNRLLA 143
EQ L +P A N+ LA
Sbjct: 182 ----EQALVFNPTHFEALVNKGLA 201
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A +F+ A E + P+ NL + + A+ AL +K
Sbjct: 95 NLGWALVNCERFEEARAALERSLALRPNAPITLRNLTITLLRLKQGEAALASATRALELK 154
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
P+ S N V + + D AA E+A+ NPT+ EA N G+ +
Sbjct: 155 PDDVDSWCNRSVAELMLRRWDGAAASAEQALVFNPTHFEALVNKGLAH 202
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 57/140 (40%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NL + + + + A+ A P ++ N V D A + AL
Sbjct: 127 LRNLTITLLRLKQGEAALASATRALELKPDDVDSWCNRSVAELMLRRWDGAAASAEQALV 186
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P ++L N G+ + + A A+AA P +AE + G LY +G + A
Sbjct: 187 FNPTHFEALVNKGLAHLELHHFEQAEATFNTALAARPMHAELLAHRGRLYMISGRTADAE 246
Query: 121 DAYEQCLKIDPDSRNAGQNR 140
Y++ + +DP+ + Q +
Sbjct: 247 ADYDRAVALDPNLQVGWQGK 266
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P C EA + LGV +A A++++PN + + +NLG + + A
Sbjct: 53 PGCFEAVHLLGVSLVSSARFAEATTFLAQAVALEPNSADAQSNLGWALVNCERFEEARAA 112
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
+E+++A P NL + A+ + + L++ PD ++ NR +A
Sbjct: 113 LERSLALRPNAPITLRNLTITLLRLKQGEAALASATRALELKPDDVDSWCNRSVA 167
>gi|344345598|ref|ZP_08776442.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
gi|343802821|gb|EGV20743.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
Length = 725
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 239/454 (52%), Gaps = 12/454 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVEC-YQMAL 59
+ NLGV ++ ++ A+ ++ P AEA N G+ + L A EC Y+ L
Sbjct: 280 LLNLGVTLADLSRYREALSCFDRVLELVPEMAEAHGNRGLALQAL-GLSGAAECSYRRVL 338
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
++ P ++ NNLG++ G+ + A +E+A++ + A A+NN + +D G + A
Sbjct: 339 ALDPRSIEAFNNLGILLHELGRSEEALRCLEQALSIDGENANAHNNRANVLKDLGRLEEA 398
Query: 120 IDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRL-YSQYTSWDN 178
I +E+ ++P A NRL +NY + ++++ A+RD+ +R + + + N
Sbjct: 399 ITGFERACALEPGQIQAESNRLFTINYHPDWSAEEVYAAYRDYDRRHGEAARAHWRAHTN 458
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
T+D ER L +GYVSPD+ +H++ Y +E L +HD +++ Y+ + + DA+T R+R V
Sbjct: 459 TRDAERRLRLGYVSPDFRSHAIRYMLEPLLEHHDRTRFELHAYAELTREDAQTARYRSLV 518
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT-WIGY 297
W G+++ ++AA +R D IDILV+L GHTA N+LG+ A +PAPV V+ W+GY
Sbjct: 519 DH----WVPTRGLNDGELAARIRADGIDILVDLAGHTAGNRLGVFARKPAPVSVSAWVGY 574
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
TTGL IDY + D + P ++ E RL Y PS G V PAL G
Sbjct: 575 GYTTGLSAIDYFLADEVLVPEGSEGLFGERPWRLAAPGGVYRPSAGMGAVNALPALERGA 634
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+TFG+ +I + ++VW+ IL VP SRLVV K F D+ + G+
Sbjct: 635 VTFGTLTRGVRINHRTVRVWSEILDRVPGSRLVVNSKDFVSDAAQQALAERFAAHGIARE 694
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTT 451
R++ I + MDI LD FP+ T
Sbjct: 695 RLE----IGYHSPPWDVLRGMDIGLDCFPHNSGT 724
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG + + + A Y A +P AE NNL + +D+ A+EC Q AL++
Sbjct: 146 SLGHVCRRLGRLEEAAAHYRRALALDPARAEIWNNLAMTLRDQAAPAAALECCQRALALA 205
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ ++ +NLG++ G+ +AA +A+ P + EA++N G+ Y+ G A+ +
Sbjct: 206 PDYVRAQDNLGLLLRELGRPEAALRAHARALELQPEFVEAWSNQGLAYQALGRAGAALAS 265
Query: 123 YEQCLKIDPD 132
+ + L+ PD
Sbjct: 266 HREALRRRPD 275
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + + A+V E A P E N+LG + + L++A Y+ AL++ P
Sbjct: 113 LGTLLAQRGEMREAMVALERAMRLGPDDPELRNSLGHVCRRLGRLEEAAAHYRRALALDP 172
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
++ NNL + Q AA E ++A+A P Y A +N
Sbjct: 173 ARAEIWNNLAMTLRDQAAPAAALECCQRALALAPDYVRAQDN 214
>gi|372273166|ref|ZP_09509214.1| sulfotransferase [Marinobacterium stanieri S30]
Length = 1017
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/561 (28%), Positives = 280/561 (49%), Gaps = 26/561 (4%)
Query: 3 NLGVAYGEMLK----FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMA 58
++ V Y L+ + AI LA++ N A+ CN+L +++ + + YQ A
Sbjct: 74 SIAVQYAAALRRADQINKAIEVLTLAYNTNQKDAKLCNDLALMHYN-------IGQYQAA 126
Query: 59 LSI-----KPNFSQS--LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYR 111
L++ N Q L +++ A + E P + ++G + R
Sbjct: 127 LNVCDSCLGTNLEQPGLLQLKASALKALHRLEKAKGLFEHLAKLQPADFRHWMDIGNIER 186
Query: 112 DAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS 171
D G++ A++ Y+Q + + D +A N L ++Y + D++F+A + W +++ +
Sbjct: 187 DLGNLDRALECYQQAMTLSGDDASAYSNYLTTLHYHPDKSRDEIFKACKLWQEQYAPAWQ 246
Query: 172 QYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKT 231
+ + +PE+ L IG +S + V I + L + + +S+ D T
Sbjct: 247 ETEHKHLSMEPEKKLRIGLISDGFKRSPVGQMITSVLEAFPKEQADFIAFSSNDARDDIT 306
Query: 232 IRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQ 291
R + W I + ++ ++ KIDIL++L GH +++ +A +PAP+
Sbjct: 307 TRIANCCSE----WHRITQLFGPELFEHIKSQKIDILIDLAGHNNGSRMSAIAMKPAPII 362
Query: 292 VTWIG-YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT 350
+ W+G NTT + IDY ++D + P Q + E+LI++P ++CY P PE P T
Sbjct: 363 IKWVGGLINTTAVDAIDYLLSDHIETPTGHDQYYTEKLIKMPHDYICYDP-PEYTPAVNT 421
Query: 351 -PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
PAL N +ITFG FNN KI +L WA I+ PNSRL++K F + R +
Sbjct: 422 LPALNNEYITFGCFNNPTKINKVILSCWADIMHLTPNSRLLLKSFQFNSPELVKRITQEM 481
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
E +G++ R+ +L + + +++Y+ +DI+LDT+PY+G TTCE++ MGVP VT G
Sbjct: 482 EAMGIDKDRL-ILEGPSPHQELLRSYNRVDIALDTWPYSGGLTTCEAMLMGVPVVTCTGP 540
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
A S + G+ L+ + +Y L+L SD+++L+ +R +LR + +S VC
Sbjct: 541 TFAGRHSASHIKNAGMYELVTDSFSQYKTRVLELTSDLSSLSIIRENLRTIFLQSNVCAD 600
Query: 530 QNFALGLESTYRNMWHRYCKG 550
+ +A L R +W R+ KG
Sbjct: 601 KEYANTLSIVLRTIWRRHAKG 621
>gi|359799250|ref|ZP_09301814.1| TPR repeat-containing protein [Achromobacter arsenitoxydans SY8]
gi|359362781|gb|EHK64514.1| TPR repeat-containing protein [Achromobacter arsenitoxydans SY8]
Length = 1085
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 255/503 (50%), Gaps = 10/503 (1%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+A+ + A+ ++P +++ + LG + + A E A+ +P + ++ NL +
Sbjct: 591 EAITAGRRAIELEPRNAEAHSALGDALNSEHRYYEARRAYETALTYDPGHRKSRVNLCKV 650
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR-FMR 168
DAG+I A A + + P S N L A NY + ++F ++++ ++ ++
Sbjct: 651 LIDAGNIEAAEIAAREAVDAFPTSPAGYDNLLFAANYSPDKTAAEVFASYQECDRQLYLP 710
Query: 169 LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
L +++ N++D R L +GYVSPD+ H+ + F+E L + D + +++ Y+ + D
Sbjct: 711 LRNKWRPHTNSRDANRKLKVGYVSPDFRQHAANRFVEPLLEHADRKRFELYAYAELTNED 770
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
T R + W +D+ K+A +R D ID+L+++ GHT N+LG A +PA
Sbjct: 771 DVTRRLKPYFDH----WVPTAKLDDSKLAERIRADGIDVLIDIAGHTKGNRLGAFARKPA 826
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
PV TW+GY TTGL IDY TD++ P T+ E L L Y P G V
Sbjct: 827 PVSATWLGYVYTTGLSAIDYIATDAIMAPAGTEDFFSERPWHL-RSNLVYRPHQGMGDVS 885
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
PAL NG++TF + +I + ++VW+ IL +P++RLVV + +R +
Sbjct: 886 ELPALENGYVTFVTLTRAIRINHRTIRVWSEILRRLPSARLVVDSSSYIDQRMRASLKAR 945
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
G+ + R+ + DI+LD FP+ TT ESLYMG+P VT+AG
Sbjct: 946 FAAAGIPAHRLH----VDFRTPPWNVLRATDIALDCFPHNSGTTLVESLYMGIPYVTLAG 1001
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
+G SLL G + IA +EDEY++ + LASD+ LA +R LR + +S + D
Sbjct: 1002 RPGVGRIGSSLLAAAGCEDWIAHSEDEYIEKVIALASDLPRLAEIRRGLRQQVQESALMD 1061
Query: 529 GQNFALGLESTYRNMWHRYCKGD 551
F E+ + M+ +C+ +
Sbjct: 1062 EVGFTRDFETAIQRMFKNWCENE 1084
>gi|345299798|ref|YP_004829156.1| methyltransferase regulatory domain-containing protein [Enterobacter
asburiae LF7a]
gi|345093735|gb|AEN65371.1| Methyltransferase regulatory domain-containing protein [Enterobacter
asburiae LF7a]
Length = 1143
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 261/528 (49%), Gaps = 55/528 (10%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A N+L +Y + +DKA C++ AL I P S L+N + + + +MD A M+ KAI
Sbjct: 651 AWNSLAHMYAEFKIVDKAEVCFEKALKIMPENSGVLSNYSALISEKLRMDEAIAMMRKAI 710
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
+P+ Y+ L +G S A
Sbjct: 711 RLSPSDMNLYSRLNFELSHSGECSPA---------------------------------- 736
Query: 154 KLFEAHRDWGK---RFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
+L+E HR +G+ ++ + +W K PER L IG+VS D H V++F++ V
Sbjct: 737 ELYEQHRVYGRQVEKWAKGQKTAFTWSADKTPERRLRIGFVSGDLCRHPVTWFLKPYWVN 796
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
D Y++ VY+ D + F + +K WR+++ ++A ++ D+IDIL++
Sbjct: 797 IDRDLYELYVYNTSPIYDEVSETFAKTAVK----WRNVFSESSVELARIINSDEIDILID 852
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS-LADPPETKQKHVEELI 329
L+GHT N+L A +PAPV + WIGYP T+GL +DY I + +A P E + E+LI
Sbjct: 853 LSGHTGYNRLPTFALKPAPVSIGWIGYPCTSGLKEMDYHICGTGMATPGELDDQFSEKLI 912
Query: 330 RLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL 389
+ + Y P + + P PAL++G TFGS N KI+ KV++VW R+L A P +RL
Sbjct: 913 FM-SMPVQYEPPANSPDINPLPALSSGVFTFGSLNRPKKISDKVIEVWGRLLAAAPQTRL 971
Query: 390 VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH--DHMQAYSLMDISLDTFPY 447
++ P + V + LE G R D L + H ++M+ + +D+ LDTFPY
Sbjct: 972 LIGYMP--SEDVIQTLRTKLEAHG---ARPDQLTFRMKMHFDEYMRMHHEIDLMLDTFPY 1026
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G TT+ +++MGVP VT+ A G ++ L+ +A +ED Y + AL
Sbjct: 1027 DGGTTSNNAVWMGVPMVTLNDKTMAGRQGNEIIKAYQLEQFLAADEDAYFEQALAWTEKR 1086
Query: 508 TALANLRMSLRDLMSK--SPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L +R+++R+ K + V + A E+T R +W YC G P
Sbjct: 1087 EELNTIRLTMRERFEKKRNQVTEP---ARTFEATLRTVWENYCSGHKP 1131
>gi|365880802|ref|ZP_09420148.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 375]
gi|365291081|emb|CCD92679.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 375]
Length = 739
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 260/526 (49%), Gaps = 16/526 (3%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL---NNLGVVYTVQGKMD 83
P + G +++ D+A+ Y+ AL+ +P +L LG + ++
Sbjct: 222 IKPGAPQVLAQRGRVHQMSGRFDQAMADYEAALAHEPTLEVALLGKAQLGHFKDIAWSVN 281
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
A +++E+ NP +A+ LG+ Y G I+ AI +++ L++ PD A ++
Sbjct: 282 ACRKILEQ----NPRSQDAWLWLGICYAKQGEIAEAIAHFDRALELKPDFAEAMTAKIFT 337
Query: 144 MNYINEGHDDKLFEA-HRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSY 202
+ ++ G D +L +A R+W +R ++ + +DPER L IGYVS D+ HS +
Sbjct: 338 LEFM-PGSDFELHQAVRREWWERIGSQIARRSLLPRDRDPERRLTIGYVSSDFRNHSAAL 396
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
L + + +++ Y+ DA T +F+ +W D + + ++A V
Sbjct: 397 TFLPVLKHASREAFRICCYACSPVQDAVTAQFQ----ACADVWVDATQMSDDELAECVEA 452
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
D +DILV+L+GH+A N+L + A +PAP+QVT G TG+P IDY D + P +
Sbjct: 453 DGVDILVDLSGHSAGNRLPLFARKPAPIQVTAWGSGTGTGVPMIDYFFADPVTVPEAARP 512
Query: 323 KHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILC 382
E++ LP + P P P P L NG +TFG FN L KIT L VWAR++
Sbjct: 513 LFAEQVYDLP-AVITTEALPGITPT-PLPMLRNGHVTFGVFNRLDKITEPTLAVWARLMR 570
Query: 383 AVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
+P+SR+V+K +R R L+ G+ R+ L Q ++ +DISL
Sbjct: 571 QLPDSRIVIKNPSLDDPLLRDRLLARFVAQGVTQDRIICLGRSTREQQIAQ-FAQVDISL 629
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
D FP G +T ESL GVP V G A +++T VGL +A+++ Y+ +A+
Sbjct: 630 DPFPQNGGVSTWESLQAGVPVVAKLGRSAAARAAAAIVTAVGLDGWVAEDDAGYISIAMT 689
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
A+ LA LR L + ++ S + +A +E YR W RYC
Sbjct: 690 WAAQPAELAKLRAKLPEQVASSAAGNVATYARKVEEGYRLFWRRYC 735
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV + + D+A A P AEA +NLG+ +R D+A +C + A++
Sbjct: 60 LHLLGVTALDGGQLDLAEQALTKAVEIEPRHAEALSNLGLALFNRKRYDEARKCQERAVA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPN + LG G + A ++AIA P YA+AY N G+ G + A
Sbjct: 120 LKPNLVVAQTGLGNTLMRLGLPEEAIAAHDRAIALKPDYADAYCNRGMALIPLGRNAEAT 179
Query: 121 DAYEQCLKIDP 131
++++ L ++P
Sbjct: 180 RSFDRALSLNP 190
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P ++ + LGV D LD A + A+ I+P +++L+NLG+ + + D A +
Sbjct: 54 PEHFDSLHLLGVTALDGGQLDLAEQALTKAVEIEPRHAEALSNLGLALFNRKRYDEARKC 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
E+A+A P A LG G AI A+++ + + PD +A NR +A+
Sbjct: 114 QERAVALKPNLVVAQTGLGNTLMRLGLPEEAIAAHDRAIALKPDYADAYCNRGMAL 169
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+A ++D A E A P+ A LG ++A+ + A++
Sbjct: 94 LSNLGLALFNRKRYDEARKCQERAVALKPNLVVAQTGLGNTLMRLGLPEEAIAAHDRAIA 153
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KP+++ + N G+ G+ A ++A++ NP + EA G+
Sbjct: 154 LKPDYADAYCNRGMALIPLGRNAEATRSFDRALSLNPRHMEAMFGKGL 201
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
C Q+ L++ P SL+ LGV G++D A + + KA+ P +AEA +NLG+ +
Sbjct: 46 CGQI-LALLPEHFDSLHLLGVTALDGGQLDLAEQALTKAVEIEPRHAEALSNLGLALFNR 104
Query: 114 GSISLAIDAYEQCLKIDPD 132
A E+ + + P+
Sbjct: 105 KRYDEARKCQERAVALKPN 123
>gi|340788763|ref|YP_004754228.1| TPR repeat protein [Collimonas fungivorans Ter331]
gi|340554030|gb|AEK63405.1| TPR repeat protein [Collimonas fungivorans Ter331]
Length = 730
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 179/599 (29%), Positives = 279/599 (46%), Gaps = 65/599 (10%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK---DRDNLDKAVECYQMA 58
+NL + G K A Y NP A+A NNLG I + D +AV+CYQ A
Sbjct: 132 FNLALTLGAQHKSQEAEAAYRKTLTMNPAQAQAWNNLGNILRHGHDPLRFQEAVDCYQRA 191
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
L I+P+++++ NLG+ Y + A KA+ P + A N+ L
Sbjct: 192 LQIRPDYTRAHTNLGLTYVQLEDRENAERHYRKALELEPHFVPALTNMAAFQEAGSQPEL 251
Query: 119 AIDAYEQCLKIDPDSRNAGQN-----RLLA-------------MNYINEGHDDKLFEAH- 159
A+ Y++ L+ P+S N R LA + ++ G D+ H
Sbjct: 252 ALPYYQEALRQHPESIRLMANVISRRRQLADWSDQNGPQPADLVQRMSAGDDEAFGPLHM 311
Query: 160 -----------RDWGKRFMRLYSQYTSWDNTKDP---------ERPLVIGYVSPDYFTHS 199
R+ G+RF R + + + + P R + +GY+S D+ H
Sbjct: 312 LAWPEFSATSQREAGRRFAR---SHLTRELAEPPLVSAVSPYAGRRIRLGYLSADFRNHP 368
Query: 200 VSYFIEAPLVYHDYQNYKVVVYS-AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
V++ I + +HD +N++V +Y+ V DA+ R+ + + + D+ GI + A
Sbjct: 369 VTHLITDVIAHHDRENFEVFLYAYGPVVEDAQ----RKALRQAAEHFIDVSGISDSDAAH 424
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI-DYRITDSLADP 317
+R+D ID+LV+LTG+T +LG+ A +PA V +W+GY + G P + DY I D++A P
Sbjct: 425 RIRDDGIDVLVDLTGYTTFARLGITARRPAAVIASWLGYIGSLGEPRLADYVIGDAVATP 484
Query: 318 PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITFGSFNNLAKITPK 372
PE E L +P C Y P+ P+ P L N F SFN K+TP
Sbjct: 485 PEHADDFSESLALMPHC---YQPNQTLAPIAAPPDRQSEGLPNDAFVFCSFNQCFKLTPS 541
Query: 373 VLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
+ W +IL AVP+S L + C ++R +Q G+ R+ L H
Sbjct: 542 LWDDWCQILNAVPHSVLWLAPMNAAACSNLRR----EAQQRGVAPERLVFAARRPLAQ-H 596
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
+L D++LDT PY TT ++L GVP VT AGS + SLL +G+ LIA
Sbjct: 597 QSRLALADLALDTMPYNSGTTASDALRAGVPLVTAAGSTFVSRMAASLLHNLGMDGLIAA 656
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
+ YV LA+ LASD L R +L + + S + + + F+ LE+ +R M + +G
Sbjct: 657 DRRSYVDLAIALASDPLRLQECRSTLENALQASKLFNPEIFSTDLENLFRAMLAQRARG 715
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
+GVI +D+L A + A+ N S++ NL + Q K A K + NP
Sbjct: 101 VGVIQYLQDDLAAAEISLREAVKKNGN-SEAYFNLALTLGAQHKSQEAEAAYRKTLTMNP 159
Query: 98 TYAEAYNNLGVLYR---DAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
A+A+NNLG + R D A+D Y++ L+I PD A N L + Y+
Sbjct: 160 AQAQAWNNLGNILRHGHDPLRFQEAVDCYQRALQIRPDYTRAHTN--LGLTYVQ 211
>gi|320530499|ref|ZP_08031557.1| hypothetical protein HMPREF9555_01661 [Selenomonas artemidis F0399]
gi|320137332|gb|EFW29256.1| hypothetical protein HMPREF9555_01661 [Selenomonas artemidis F0399]
Length = 524
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 225/406 (55%), Gaps = 16/406 (3%)
Query: 141 LLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSV 200
LLA N E + +LF AH +G F + QYT + + + E+ + +GY+SPD+ + +
Sbjct: 123 LLAQN-AREVDEGELFAAHCTYGALFADV-PQYT-FPSPRRHEK-IRVGYISPDFRRNVM 178
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
FI+ L +D ++V VYS + D T E + +WRD+ + AA +
Sbjct: 179 QNFIQPLLTAYDRAGFEVYVYSTATEPDDVT----EALRSYADVWRDVGDAPAAETAARI 234
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
R D+ID+L++L GH A L ++A +PAPVQ+ +GY T+GL +D +TD++ DPP
Sbjct: 235 RADEIDVLIDLAGHAAGGALPVLARRPAPVQMLGLGYTATSGLHEVDAFLTDAVCDPPGA 294
Query: 321 KQKH--VEELIRLPECFLCYTPSPEAGPVC-PTPALTNGFITFGSFNNLAKITPKVLQVW 377
+ EEL+RLP F CY P P PV TPA G+I FG FN K T ++L VW
Sbjct: 295 GHERYFTEELVRLPSQF-CYVP-PAHLPVSRETPARRRGYIVFGVFNQYRKFTDEMLSVW 352
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
IL VP SRL++K + F +R L +LG + RV L P + +M+ Y
Sbjct: 353 REILERVPASRLLLKSQVFFAGEMRAAAEERLRRLGFDLGRVLLEPA---DTGYMRRYLD 409
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
+DI+LDTFP+ G TTC++LYMGVP VT + + G +LL+ +GL L A ++Y+
Sbjct: 410 VDIALDTFPWPGGGTTCDALYMGVPMVTRYAARRSTRFGCALLSHIGLAELAAMGTEDYI 469
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
LA LA D+ L +L LR +M +SP+ D + + LE YR
Sbjct: 470 ALAAALAGDLDTLDDLHRGLRGMMERSPLMDQKGYMRALEDAYRRF 515
>gi|381160360|ref|ZP_09869592.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
gi|380878424|gb|EIC20516.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiorhodovibrio sp. 970]
Length = 914
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 174/619 (28%), Positives = 284/619 (45%), Gaps = 81/619 (13%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIY-------KDRDNLDKAVE-- 53
NLG+ E+ + + A E A +P C +A + LG+ K RD++++A+E
Sbjct: 285 NLGIVTRELNEPEQARGLLEQAVALDPECGDAWHQLGLTQARLEDFEKARDSVERALELS 344
Query: 54 -------------------------CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
CY AL++ P + + LG +T + A E
Sbjct: 345 PENADCHLTLAQVHVMLEDYPSAIGCYHNALALTPAHAPTWVALGNAHTSLEQHTQAEEA 404
Query: 89 IEKAIAANPTYAEAY----------------------------------NNLGVLYRDAG 114
+AI A+P A+A+ LG + + G
Sbjct: 405 YRRAITADPRCAQAHAQLGFCLNGQQRYQEALAALDQALALEPDSVLALGTLGRVRMELG 464
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFM----RLY 170
+ + +AY + L +P++ L AM Y +KL W + R
Sbjct: 465 QLEASAEAYRRALAREPENNRLRSAMLGAMAYSGHWPPEKLCAEAEQWEHYSLPPKDRQA 524
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
++ ++ R L +G +S + H V+ F+ L D ++VV+Y A ++D
Sbjct: 525 ARERAFQRMSREGRRLRLGLLSNELIVHPVACFLRTWLRELDRSRFEVVLYPAHGRSDDY 584
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
T F+ W+ + G+ + + A ++ D++D+L++ +GH A N+LG++A + APV
Sbjct: 585 TGEFQALADH----WQPLKGLSDARAADVLLGDQLDLLIDTSGHEAGNRLGVIARRVAPV 640
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPVC 348
Q +IGY TTGL +DY I D + PPE + E++ RLP Y P S A
Sbjct: 641 QCHYIGYYATTGLSQMDYFIGDGVLIPPEHARHFSEKIWRLPRSRYAYEPHESVPAPRWW 700
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
P P G + GSFNNL K+ + L +WAR+L A+P + L +K + R L
Sbjct: 701 PDP---GGRLWVGSFNNLFKVREESLALWARVLHALPQAHLALKDFKGANRVHQLRVLKA 757
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
L G++ RV LL +HM Y+ +DI+LDT P+ TT ++L+MG P VT+AG
Sbjct: 758 LAAQGIDESRVALLRATPSWSEHMAYYNRLDIALDTLPFNSATTAFDALWMGCPLVTLAG 817
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A S L+ +G +A++ED+YV++A++LA DV +R + R M + +CD
Sbjct: 818 DRMAGLQAASALSGLGRTQWVARDEDDYVRIAVELARDVAGRKQIRETQRACMQQGELCD 877
Query: 529 GQNFALGLESTYRNMWHRY 547
G A LE+ + M+ R+
Sbjct: 878 GTGLARALEAAFEAMFARW 896
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 7 AYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS 66
A GE+++ + + Y A P NLG + ++ +D A Y+ AL ++P F+
Sbjct: 190 ARGELMEAEAS---YRRALELAPEQPNTHYNLGNLLEELGRVDDAEHSYREALRLQPRFA 246
Query: 67 QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQC 126
+ NNLG + G+++ A E +AIA P A+A+ NLG++ R+ A EQ
Sbjct: 247 AAANNLGAILHADGRLEQAREAFVQAIADAPDLADAHLNLGIVTRELNEPEQARGLLEQA 306
Query: 127 LKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRL 169
+ +DP+ +A L + + FE RD +R + L
Sbjct: 307 VALDPECGDAWHQLGLTQARLED------FEKARDSVERALEL 343
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG E+ + D A Y A P A A NNLG I L++A E + A++
Sbjct: 216 YNLGNLLEELGRVDDAEHSYREALRLQPRFAAAANNLGAILHADGRLEQAREAFVQAIAD 275
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+ + + NLG+V + + A ++E+A+A +P +A++ LG+ A D
Sbjct: 276 APDLADAHLNLGIVTRELNEPEQARGLLEQAVALDPECGDAWHQLGLTQARLEDFEKARD 335
Query: 122 AYEQCLKIDPDS 133
+ E+ L++ P++
Sbjct: 336 SVERALELSPEN 347
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ +L ++ G++ + D ++ E A + H A A N + + R L +A Y+ AL
Sbjct: 150 LASLLISGGDLAQADASL---ERALQLDSHLASAHANRARLLRARGELMEAEASYRRALE 206
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + NLG + G++D A +A+ P +A A NNLG + G + A
Sbjct: 207 LAPEQPNTHYNLGNLLEELGRVDDAEHSYREALRLQPRFAAAANNLGAILHADGRLEQAR 266
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
+A+ Q + PD +A N + +NE
Sbjct: 267 EAFVQAIADAPDLADAHLNLGIVTRELNE 295
>gi|313896896|ref|ZP_07830443.1| TPR/SEC-C domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974343|gb|EFR39811.1| TPR/SEC-C domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 516
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 231/430 (53%), Gaps = 20/430 (4%)
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF--MRLYSQYTSW 176
A + Y + +P + LLA N E + +LF AH +G+ F ++ Y+ +
Sbjct: 93 AAEFYYDAYREEPAEAGLYSSFLLAQN-AREVDEAELFAAHCAYGELFADVKRYTFPAPY 151
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
+ K + +GY+SPD+ + + FI+ L +D ++V VYS + D T R
Sbjct: 152 RHEK-----IRVGYISPDFRRNVMQNFIQPLLTAYDRARFEVYVYSTAAEPDDVTAALR- 205
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
+WRD+ + + AA +R D+ID+LV+L GH A L ++A +PAPVQ+ +G
Sbjct: 206 ---PYADVWRDVGEVSPGETAARIRADEIDVLVDLAGHAAGGALPVLARRPAPVQMLGLG 262
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKH--VEELIRLPECFLCYTPSPEAGPVC-PTPAL 353
Y T+GL +D +TD++ DPP + EEL+RLP F CY P P PV TPA
Sbjct: 263 YTATSGLHEVDAFLTDAVCDPPGAGHERYFTEELVRLPSQF-CYVP-PAHLPVSRETPAR 320
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
G+I FG FN K T ++L VW IL VP SRL++K + F +R L +LG
Sbjct: 321 RRGYIVFGVFNQYRKFTDEMLSVWREILERVPASRLLLKSQVFFAGEMRAAAEERLRRLG 380
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ RV L P + +M+ Y +DI+LDTFP+ G TTC++LYMGVP VT + +
Sbjct: 381 FDLGRVLLEPA---DTGYMRRYLDVDIALDTFPWPGGGTTCDALYMGVPMVTRYAARRST 437
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
G +LL+ +GL L A ++Y+ LA LA D+ L +L LR +M +SP+ D + +
Sbjct: 438 RFGCALLSHIGLAELAAMGTEDYIALAAALAGDLDTLDDLHRGLRGMMERSPLMDQKGYM 497
Query: 534 LGLESTYRNM 543
LE YR
Sbjct: 498 RALEDAYRRF 507
>gi|456354098|dbj|BAM88543.1| O-linked N-acetylglucosamine transferase, SPINDLY family [Agromonas
oligotrophica S58]
Length = 739
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 255/524 (48%), Gaps = 14/524 (2%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL---NNLGVVYTVQGKMDA 84
P A+ G +++ ++A + AL P +L LG V +DA
Sbjct: 223 KPGAAQVLAQRGRLHQIAGRFEQAKADFDAALVGDPWLEMALLGKAQLGHFKDVAQSVDA 282
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
+++E+ NP +A+ LGV Y G ++ A+ +++ L+I PD A ++ +
Sbjct: 283 CRKVLEQ----NPLSEDAWLWLGVCYGKQGEVAAAVAHFDRALEIRPDFAEAMTAKIFTL 338
Query: 145 NYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFI 204
++ + + A R+W +R Q DPER L+IGYVS D+ HS +
Sbjct: 339 EFMPDADFELHQAARREWWQRIGSRIPQRRLLPRNLDPERRLIIGYVSSDFRNHSAALTY 398
Query: 205 EAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDK 264
L + + Q+++V Y+ DA T +FR +W D + + ++A + D
Sbjct: 399 LPVLKHANRQDFQVCCYACSPVQDAVTAQFR----GCADVWVDASQMSDDELADCITADG 454
Query: 265 IDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH 324
+DILV+L+GH+A N+L + A +PAPVQVT G TGLPTIDY + D + P +
Sbjct: 455 VDILVDLSGHSAGNRLPLFARKPAPVQVTAWGSGTGTGLPTIDYFLADPVTIPEAARHLF 514
Query: 325 VEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAV 384
E++ LP + P P P P L NG +TFG FN L KI+ L VW ++ V
Sbjct: 515 AEQVYDLP-AVITTDALPGIEPT-PLPMLHNGHVTFGVFNRLDKISDPALAVWTALMQRV 572
Query: 385 PNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
P+SR+V+K +R R L+ G+ R+ L Q ++ +DISLD
Sbjct: 573 PDSRIVIKSSSLDDPLLRDRLLARFAAHGVTQERITCLGWSTREQQIAQ-FAQVDISLDP 631
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
FP G +T ESL GVP + G A +++T VGL +A+++D Y+ +A++ A
Sbjct: 632 FPQNGGVSTWESLQAGVPVIARLGRSAASRAAGAIVTAVGLGDWVAEDDDSYIAIAVKWA 691
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+ LA LR L + S + + +A +E YR W R+C
Sbjct: 692 AQPAELAKLRTELPARVGNSAAGNVETYARKVEEGYRLFWRRHC 735
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV+ + + D+A A P AEA +NLG+ +R + A +C + A++
Sbjct: 60 LHLLGVSALDGGRLDLAEQALTKAVEIEPRHAEALSNLGLALFNRKRFEDARKCQERAIA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KP + LG G + A ++AIA P YA+AY N G+ G + A
Sbjct: 120 LKPTLVVAQTGLGNTLMRLGHPEEAIAAHDRAIALKPDYADAYCNRGMALLPLGRNADAN 179
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
++++ L ++P A + LA+ IN H
Sbjct: 180 RSFDRALSLNPRHMEAMFGKGLAI--INLHH 208
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LGV D LD A + A+ I+P +++L+NLG+ + + + A +
Sbjct: 54 PDHFDALHLLGVSALDGGRLDLAEQALTKAVEIEPRHAEALSNLGLALFNRKRFEDARKC 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
E+AIA PT A LG G AI A+++ + + PD +A NR +A+
Sbjct: 114 QERAIALKPTLVVAQTGLGNTLMRLGHPEEAIAAHDRAIALKPDYADAYCNRGMAL 169
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
C Q+ L++ P+ +L+ LGV G++D A + + KA+ P +AEA +NLG+ +
Sbjct: 46 CGQI-LALLPDHFDALHLLGVSALDGGRLDLAEQALTKAVEIEPRHAEALSNLGLALFNR 104
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH 159
A E+ + + P A L + GH ++ AH
Sbjct: 105 KRFEDARKCQERAIALKPTLVVAQTG--LGNTLMRLGHPEEAIAAH 148
>gi|253688946|ref|YP_003018136.1| type 11 methyltransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755524|gb|ACT13600.1| Methyltransferase type 11 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 1143
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 245/500 (49%), Gaps = 25/500 (5%)
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N + + N + +VY M A +EKA+ P A N + ++ ++ AID Y
Sbjct: 648 NVAVAWNVVALVYLKFENMSGAEVCLEKAMQLLPNDAAILNGMAMVLDKKSNVESAIDYY 707
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT--SWDNTKD 181
+ + PD + N L A+ + ++F H +G+ + T + KD
Sbjct: 708 RRAVAAAPDDLSIYSNLLFALLHNANIPASEVFAEHLLYGEAVEKRIGASTPVHYLQNKD 767
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY--QNYKVVVYSAVVKADAKTIRFREKVM 239
P R L IG+VS D ++H VS F+ V++D Q++ + YS D T E+
Sbjct: 768 PNRVLRIGFVSGDLYSHPVSKFLSP--VWNDINPQHFALYAYSTSHHYDEVTRMLEER-- 823
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+WR++ + ++ ++++D+IDIL +L+GHT +N+L M A +PAP+Q++WIGYP
Sbjct: 824 --SAVWRNVASSSDTELFELIKQDEIDILFDLSGHTGDNRLSMFAMKPAPIQISWIGYPG 881
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TTGL +DY + + A PE E + + P V PAL NG++T
Sbjct: 882 TTGLKAMDYYLVMNHAPYPEVLAHQFTEKLLYVLFDRQFEPVVNGPDVNDLPALKNGYLT 941
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE---- 415
F SFN KI VL W +IL +P S++++ P R LE G++
Sbjct: 942 FASFNRPTKINDTVLSAWGKILVQLPTSKMIIGALP--SQQSREHIRKRLESQGVQPDQL 999
Query: 416 --SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
RV+++ + ++ + +D+ LDTFPY G TTT +L+MGVP +T+AG +A
Sbjct: 1000 IFRERVNIMSYLAMHQE-------IDVLLDTFPYTGGTTTNYALWMGVPTLTLAGETYAA 1052
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
GV L + GL IA +E +Y+ A+ + + L +R SLR M+ D A
Sbjct: 1053 RQGVVNLGQAGLNEFIADSEADYIDKAISWNNRLDELNQIRHSLRKKMAHDVGADNVTAA 1112
Query: 534 LGLESTYRNMWHRYCKGDVP 553
E R +W YC G+ P
Sbjct: 1113 TYFEQALRMVWKAYCAGEPP 1132
>gi|296101723|ref|YP_003611869.1| putative SAM-dependent methyltransferases/O-linked
N-acetylglucosamine transferase [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295056182|gb|ADF60920.1| putative SAM-dependent methyltransferases/Predicted O-linked
N-acetylglucosamine transferase [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 1111
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 256/531 (48%), Gaps = 25/531 (4%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+L + + + L + Q L + N + N L VVY + M A +++ N
Sbjct: 592 DLATVLQKKGELHYSARILQALLRLNKNNASFWNTLAVVYHSRRNMAMAERCARESLRYN 651
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
T +G++ D ++ A E+ L+ P + + L + + + LF
Sbjct: 652 ATNPLHLAMMGIILSDNQKLTEARYFLEKSLEFAPGDFDCFTSLLFVLTHDFSVSPEVLF 711
Query: 157 EAHRDWGK---RFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
E H +G+ + + + W +KDPERPL +G+VS D+ H VS F+ D
Sbjct: 712 ERHLAYGELVSAWAKKFDLTLPWQGSKDPERPLRVGFVSGDFRNHPVSRFLRPFWDGMDR 771
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ + + YS + K DA T FR K W + ++ ++A + D IDIL +L+G
Sbjct: 772 EQFSLYGYSTLDKDDAVTEHFRNTSTK----WLSVTDLNNVELAKQIHSDGIDILFDLSG 827
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR-ITDSLADPPETKQKHVEELIRLP 332
HT +L A +PAPVQ+TW+GYP TTG+ +DYR I+ + E+LI +P
Sbjct: 828 HTTGTRLPAFAFKPAPVQITWLGYPGTTGMTQMDYRIISTGFVRNAAIDAQFTEKLIAIP 887
Query: 333 -ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV 391
+ F + P + V PALTNG+ T+GSFN K+ +V +WARIL SRL++
Sbjct: 888 LDNF--FEPDASSPDVNTLPALTNGWFTYGSFNRPKKLNDRVFALWARILQHNATSRLLI 945
Query: 392 KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM----DISLDTFPY 447
D++ R+ L LG+ + LI M+AY M D+ LD+FPY
Sbjct: 946 GF--MDDDAMIARYRKKLNALGVADEQ-----LIFRKTTGMEAYLQMHHEVDMLLDSFPY 998
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G TTT ++MGVP +T+AG+ + G+ ++ GL +A+++ +Y A++ + +
Sbjct: 999 NGGTTTSHGIWMGVPTLTLAGATYPARQGLEIMHIYGLDEFVAESQQDYFDKAVRWQTQL 1058
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
L LR S+R S P N A+ + R W ++C + P R+
Sbjct: 1059 ETLNALRQSMR---STIPTQGQSNVAIPFQQALRQAWRKWCADEAPHSFRV 1106
>gi|313202444|ref|YP_004041102.1| hypothetical protein MPQ_2726 [Methylovorus sp. MP688]
gi|312441760|gb|ADQ85866.1| TPR repeat-containing protein [Methylovorus sp. MP688]
Length = 552
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 266/509 (52%), Gaps = 9/509 (1%)
Query: 45 RDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYN 104
R + +A+ Y +LS++ N + +G ++ K A E +E + +P +A
Sbjct: 22 RQDYFEALSKYTASLSLEGNQVPTWVRIGKIFLRTMKYQQARETMEFVLGMDPHNVDAIY 81
Query: 105 NLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164
L + Y G + A +Q +++ PD+ +R + I++ ++ + ++ WG+
Sbjct: 82 GLAISYFYLGKLEEARAFIDQAVQMQPDNATYAIDRA-NIYSISQPDPERKRQLYQAWGQ 140
Query: 165 RFMR-LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA 223
RF L Q N ++P+R L +GYVS D H++++F+E +HD +V V+S
Sbjct: 141 RFADPLARQSPPLLNNRNPDRVLKVGYVSGDMRDHAIAFFMEPVFRHHDPSQVEVHVFST 200
Query: 224 VVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMM 283
++ D T + V W D+ +D+ + +R +ID+LV+L+GHT ++L +
Sbjct: 201 AMQEDDTTAHLKSLVPH----WHDVSKLDDDALFKRIRALQIDVLVDLSGHTYGHRLYVF 256
Query: 284 ACQPAPVQVTWIGY-PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP 342
A + APVQVTW+GY T G+ +DYR+TD ADP + ++E+L RL C Y P
Sbjct: 257 ARRAAPVQVTWLGYMGGTLGMQAMDYRLTDYSADPIGHESYYLEKLYRL-ACMASYIPPA 315
Query: 343 EAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR 402
A V P L T G N+ K+T +L++W RI+ P+ +L++ + D
Sbjct: 316 HAPLVEIPPMLQGNPPTIGCLNSSRKVTDHMLRLWKRIMERRPDIQLLLHVQENTIDDAI 375
Query: 403 HRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVP 462
H L +L + R+ + P++ L+ + M+ SL+D++LDT P +G TTT +L+MG+P
Sbjct: 376 HTIEPRLVELDMPLDRIIVSPMVPLD-EFMERGSLVDVALDTSPVSGGTTTLHTLWMGLP 434
Query: 463 CVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMS 522
VT+ + LT +G IA+++D+Y+++ L+L + LA++R +R M
Sbjct: 435 VVTLDADEAVSSATACTLTGLGFSDWIAQSDDDYIEIILRLLDNPEQLASMRSVIRARML 494
Query: 523 KSPVCDGQNFALGLESTYRNMWHRYCKGD 551
S + D Q LE+ YR +WH Y G+
Sbjct: 495 GSVLMDYQTRCTELETAYRRLWHNYLLGE 523
>gi|71906424|ref|YP_284011.1| hypothetical protein Daro_0785 [Dechloromonas aromatica RCB]
gi|71846045|gb|AAZ45541.1| TPR repeat [Dechloromonas aromatica RCB]
Length = 796
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 262/519 (50%), Gaps = 19/519 (3%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG ++ R + AVE + +++ +P + N L V Y+ G+M+ A +K + +P
Sbjct: 285 LGAMFAQRGDWKIAVENLEASVAREPTSTTGWNILIVAYSKLGEMEKAEAAAKKILEIDP 344
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFE 157
+ A NLG L D G I +++ L P+S A L M + +E + E
Sbjct: 345 HHVNALINLGGLKIDLGFHDEGIQLFQRALAQAPESPAAYSGLLFGMLFSSEVPVKDILE 404
Query: 158 AHRDWGKRFMR-LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNY 216
A + +R L Y+ D +D ER L IG+VS D H+V F+ + + + + +
Sbjct: 405 AAANGDERVWHPLLRNYSFADRNQDVERSLKIGWVSSDLRGHAVGAFVGPFVGFLNKERF 464
Query: 217 KVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTA 276
+ VY D+ T R WR I G+ + A ++R D+IDIL++L G+TA
Sbjct: 465 QHYVYDNWSIEDSVTAMIRPFATH----WRKILGLGDNAAAELIRSDEIDILIDLNGYTA 520
Query: 277 NNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL-IRLPECF 335
++LG+ A +PAP+QV W+GYP TTG+ +DY + + D K E+ L +C+
Sbjct: 521 GHRLGVFARKPAPIQVEWLGYPGTTGMSAMDYILVPN--DDFLAKGGWCTEMPWPLKDCY 578
Query: 336 LCYTPSPEAGPVCPT-PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCK 394
+ P+ PV T P + TF N +K++ + L +W +L VPNSRL++ +
Sbjct: 579 GVRSGIPDV-PVRETLPCDESNIFTFACMNRFSKVSMRALDLWGDLLLKVPNSRLLLIGR 637
Query: 395 PFCCDSVRHRFLSTLEQLGLESLRVDLL----PLILLNHDHMQAYSLMDISLDTFPYAGT 450
+ ++ G+ + R+++L P H+++ Y+ +D+ LD FP+ G
Sbjct: 638 GGSDEQTVRALRKRFQEKGVPAERLEILESKPP-----HEYLDTYNQVDLCLDPFPFNGG 692
Query: 451 TTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510
TT +S++MGVP VT+ G G ++L V L L+A +E EYV A+ LA+D AL
Sbjct: 693 TTGFDSIWMGVPYVTLRGDSLHSRAGSNILKYVDLADLVADSESEYVAKAVALAADRDAL 752
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
R LR+ M SP+ D FA G+E R MW +C+
Sbjct: 753 RRHRNRLRERMMASPLMDTAGFAKGIEDALRGMWRVWCE 791
>gi|153874791|ref|ZP_02002873.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152068744|gb|EDN67126.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 354
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 206/348 (59%), Gaps = 7/348 (2%)
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
+E L HD ++V VY+ V+ DA T + + V WRDI G+ ++ A+ +RED
Sbjct: 1 MEPVLAAHDKTQFEVFVYADVINPDAATQKLQGYV----DTWRDIVGLSHEQAASQIRED 56
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP-PETKQ 322
KID+L++L GHT N+L + A +PAPVQVT++GY TTGL TIDY++TD++ DP ET+
Sbjct: 57 KIDVLIDLAGHTDKNRLLVFAQKPAPVQVTYLGYAGTTGLSTIDYKLTDNVLDPVGETEA 116
Query: 323 KHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILC 382
H E+L+RLP + ++ V PAL NG+ITF SFNN +K+T ++ +WA+IL
Sbjct: 117 FHTEKLVRLPIYRIVDFDREKSPGVNRLPALDNGYITFASFNNFSKVTSYIIAIWAKILT 176
Query: 383 AVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
+P +RL++ K + + + + + + R++++ + + + ++ +D+SL
Sbjct: 177 VLPTARLLIVVKDADKEETQQHVKNLFVKHDIATERLEIVGTSPF-YQYFEQHNQVDVSL 235
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
FP+ G TTT SL+MGVP +T+ G A LLT +GL+ +AK +EYV +AL
Sbjct: 236 GPFPHMGATTTFVSLWMGVPVITLTGQTPASRGEGPLLT-LGLEDFVAKTSEEYVDIALN 294
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
+A+++ L R LRD M SP+ D + F +E+ YR +G
Sbjct: 295 IANNLDKLNQTRTGLRDKMLNSPLMDAEKFTHSVEAAYRQNVANMVRG 342
>gi|424800119|ref|ZP_18225661.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter sakazakii 696]
gi|423235840|emb|CCK07531.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter sakazakii 696]
Length = 694
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 262/526 (49%), Gaps = 54/526 (10%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A N L +Y +R + A +C + A+ ++ + L+ +G++++ KM A +EK
Sbjct: 206 ANCWNLLACLYHERREMTIAEKCARQAIRLRADVPYFLSIMGIIFSDNQKMADARYFLEK 265
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
++A + + +L + S+S
Sbjct: 266 SLALKSPDFDTFTSLLFVMSHDASVSPV-------------------------------- 293
Query: 152 DDKLFEAHRDWGKRFMRLYS--QYTSWDNTK-DPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+L AH+++G++ + Q T N +P R L +G+VS D H VS F
Sbjct: 294 --ELITAHKEYGRQVNEWVASQQVTVRHNVNNEPNRKLRVGFVSADLRQHPVSNFFLPFW 351
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+ +++++ YS K D + E K +WR I G ++A + EDKIDIL
Sbjct: 352 DNLNRNDFELIAYSNSEKYDEVS----EHFAKSAALWRTITGFSNAELAQQIVEDKIDIL 407
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRI-TDSLADPPETKQKHVEE 327
+L+GHT +L M +PAP+Q+TW+GYP T+GL +DYRI T P E +H E+
Sbjct: 408 FDLSGHTTGTRLPMFGFKPAPIQITWLGYPGTSGLAQMDYRIVTPGFGKPGEMDAQHSEK 467
Query: 328 LIRLP-ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
L+ +P + F + PSP + + P PAL+NG+ T+GSFN K+ +V +WA+IL
Sbjct: 468 LLYIPLQNF--FAPSPLSPEINPLPALSNGYFTYGSFNRPKKLNKEVFSLWAKILSRNAT 525
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI-LLNHDHMQAYSLMDISLDTF 445
+RL++ D + R+ L LG++ ++ L N+ HM + +D+ LD+F
Sbjct: 526 ARLLIGFMD--DDEMIARYRKKLYALGVQEEQLIFRRTTNLENYLHM--HHEVDLLLDSF 581
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
PY G TTTC +++MGVP +++AG+ A V + GL+ I ++DEY++ A+ S
Sbjct: 582 PYTGGTTTCHAVWMGVPTLSIAGATPASRQSVETMHIYGLQSFIVGSQDEYLEKAVWWQS 641
Query: 506 DVTALANLRMSLRD-LMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
++ L LR ++RD + + P G N A LE R WH YC G
Sbjct: 642 NLDELNALRQNMRDNIPMQQP---GFNAAAPLEKALRQAWHLYCAG 684
>gi|434406348|ref|YP_007149233.1| TIGR03032 family protein [Cylindrospermum stagnale PCC 7417]
gi|428260603|gb|AFZ26553.1| TIGR03032 family protein [Cylindrospermum stagnale PCC 7417]
Length = 1083
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 182/647 (28%), Positives = 291/647 (44%), Gaps = 98/647 (15%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y LGV + + D A + Y+ A NP+ AEA NNLG++ NL A+ C+ A+
Sbjct: 448 YQLGVIVDNLGQRDEAALAYQKALTINPNYAEAHNNLGIVRVAEKNLAAAISCFTAAIKS 507
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL------------ 109
KP+++ + NNLG+V+ +Q K AA +A+ NP YAEAY NLG++
Sbjct: 508 KPDYAFAHNNLGLVWQMQTKFAEAAAKFREALQINPEYAEAYLNLGMVLEAQGNLQDAIA 567
Query: 110 -YRDA--------------------------GSISLAIDAYEQCLKIDPDSRNA------ 136
YR A G + A +EQ LK+ PDS A
Sbjct: 568 CYRSAVRHKTDYIKADNRLGLALIKLAMVSKGDVEEARGIFEQVLKLQPDSAEAFTHLVY 627
Query: 137 -------GQNRLLAMNYINEGHDDKL----------FEA-HRDWGKRFMRLYSQY----- 173
++R + I E +L F+ ++ W + + +Q
Sbjct: 628 LKEMSCDWRDRQSDLTRIGEQTQRELQTGQSTTIAAFDTLYKPWERTLLLQVAQTHGTAM 687
Query: 174 -TSWDNTKDP-----ERPLV----IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA 223
T W + R L IGY+S D+ H++S+ I H+ N+++ YS
Sbjct: 688 ETQWTQMRQALNFTHSRSLTGRLKIGYLSSDFRNHAMSHLIRGLFRCHNRDNFEIFAYST 747
Query: 224 VVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMM 283
+++ +R + + ++DI + ++ A ++ I IL++L +TA ++ +
Sbjct: 748 GPDDNSE---YRRYIASQSEHFQDIATLSTEESARLIFAHGIHILIDLNAYTAGSRSQIF 804
Query: 284 ACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPE 343
A +PAP+QV +G+P T G IDY I D++ PPE + E+++ LP + +T + +
Sbjct: 805 ALKPAPIQVNHVGFPGTMGADFIDYIIGDAIVTPPEFAEAFSEKIVTLPHSYY-FTDNQQ 863
Query: 344 AGPVCPTPAL-------TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCK-P 395
A + TP +GF+ F FNN KI P + W RIL VP L + + P
Sbjct: 864 A--ISSTPITRSQYGLPESGFV-FCCFNNNYKIEPLIFDAWMRILADVPEGVLWLLPRFP 920
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCE 455
+++R E G+ R+ + + +H+ + L D+ LDT Y T+ +
Sbjct: 921 VAKENLRRE----AEMRGISEERL-IFADVEPKPEHLARHRLADLFLDTLYYNAHTSATD 975
Query: 456 SLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRM 515
+L+ G+P +T G+ A V SLLT VGL L+ N EY QLA+ LA L L+
Sbjct: 976 ALWAGLPVITCPGTTFASRVAASLLTAVGLPELVTANLQEYEQLAINLAKSPGELLQLKQ 1035
Query: 516 SLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQ 562
L + P+ D F LE Y MW Y G P ++ +Q
Sbjct: 1036 KLAQNRTTHPLFDTSRFTRNLEQAYSKMWEVYAAGKSPQSIQVSDIQ 1082
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y G+A+ ++ AI Y+ P A A LGVI + D+A YQ AL+
Sbjct: 413 LYQQGLAWQNSGQYHDAIAQYQQLITQYPEYAPAWYQLGVIVDNLGQRDEAALAYQKALT 472
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I PN++++ NNLG+V + + AA AI + P YA A+NNLG++++ + A
Sbjct: 473 INPNYAEAHNNLGIVRVAEKNLAAAISCFTAAIKSKPDYAFAHNNLGLVWQMQTKFAEAA 532
Query: 121 DAYEQCLKIDPD 132
+ + L+I+P+
Sbjct: 533 AKFREALQINPE 544
>gi|148256897|ref|YP_001241482.1| SPINDLY family O-linked N-acetylglucosamine transferase
[Bradyrhizobium sp. BTAi1]
gi|146409070|gb|ABQ37576.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. BTAi1]
Length = 739
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 262/530 (49%), Gaps = 26/530 (4%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL---NNLGVVYTVQGKMDA 84
P+ A+ G +++ D+A + AL+ P +L LG V +DA
Sbjct: 223 KPNAAQVLAQRGRLHQTAGRFDQARADFAAALAHDPMLEMALLGSAQLGHFSNVAQSIDA 282
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
++E+ NP +A+ LGV G ++ A+ +++ L+I PD A ++ +
Sbjct: 283 CRRVLEQ----NPLSEDAWLWLGVCCGKQGEVAAAVAHFDRALEIRPDFAEAMTAKIFTL 338
Query: 145 NYINEGHDDKLFEA-HRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ + D +L +A R+W +R + DPER L IGYVS D+ HS +
Sbjct: 339 EFMPDA-DFELHQAVRREWWQRIGSRIPRRALPPRDLDPERRLTIGYVSSDFRNHSAALT 397
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
L + + Q+ ++ Y+ DA T +FR +W D + + ++A + D
Sbjct: 398 FLPVLKHANRQDVRICCYACSPVQDAVTAQFR----ACADVWVDASQMSDDELADRIEAD 453
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
+DILV+L+GH+A N+L + A +PAPVQV+ G TGLPTIDY D + P +
Sbjct: 454 AVDILVDLSGHSAGNRLPLFARKPAPVQVSAWGSGTGTGLPTIDYFFADPVTVPMAARPL 513
Query: 324 HVEELIRLP-----ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWA 378
E++ LP E C P+P P L NG +TFG FN L KI+ VL VW
Sbjct: 514 FAEQVHDLPAVITTEALPCIAPTP-------LPMLQNGHVTFGVFNRLDKISDPVLLVWT 566
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
R++ +P+SR+V+K +R R L+ G+ R+ L Q ++ +
Sbjct: 567 RLMRQLPDSRIVIKSGSLDDPLLRDRLLARFAAQGVSQDRITCLGWSTRELQIAQ-FAQV 625
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
DISLD FP G +T ESL GVP + + G A +++T VGL+ +A+++D Y+
Sbjct: 626 DISLDPFPQNGGVSTWESLQAGVPVIALLGRSAASRAAAAIVTAVGLEDWVAEDDDGYIA 685
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+A++ AS LA LR L +++ S + + +A +E YR W R+C
Sbjct: 686 MAIKHASRPDVLARLRAELPGMVANSAAGNVETYARKVEEGYRLFWRRFC 735
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV + + D+A A +P AEA +NLG+ R ++A +C + A++
Sbjct: 60 LHLLGVTALDGGQLDLAEQALAKAVEVDPRHAEALSNLGLALFSRKRFEEARKCQERAVT 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KPN + LG G+ D A ++AIA P YA+AY N G+ + A
Sbjct: 120 LKPNLVVAQTGLGNTLMRLGRPDEAVAAHDRAIALKPDYADAYCNRGMALLTLNRNAEAN 179
Query: 121 DAYEQCLKIDP 131
++++ L ++P
Sbjct: 180 QSFDRALSLNP 190
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LGV D LD A + A+ + P +++L+NLG+ + + + A +
Sbjct: 54 PDHVDALHLLGVTALDGGQLDLAEQALAKAVEVDPRHAEALSNLGLALFSRKRFEEARKC 113
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
E+A+ P A LG G A+ A+++ + + PD +A NR +A+ +N
Sbjct: 114 QERAVTLKPNLVVAQTGLGNTLMRLGRPDEAVAAHDRAIALKPDYADAYCNRGMALLTLN 173
Query: 149 E 149
Sbjct: 174 R 174
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG+A +F+ A E A P+ A LG D+AV + A++
Sbjct: 94 LSNLGLALFSRKRFEEARKCQERAVTLKPNLVVAQTGLGNTLMRLGRPDEAVAAHDRAIA 153
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+KP+++ + N G+ + A + ++A++ NP + EA G+
Sbjct: 154 LKPDYADAYCNRGMALLTLNRNAEANQSFDRALSLNPRHMEAMFGKGL 201
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
C Q+ L++ P+ +L+ LGV G++D A + + KA+ +P +AEA +NLG+
Sbjct: 46 CGQI-LALLPDHVDALHLLGVTALDGGQLDLAEQALAKAVEVDPRHAEALSNLGLALFSR 104
Query: 114 GSISLAIDAYEQCLKIDPD 132
A E+ + + P+
Sbjct: 105 KRFEEARKCQERAVTLKPN 123
>gi|114769247|ref|ZP_01446873.1| TPR repeat [Rhodobacterales bacterium HTCC2255]
gi|114550164|gb|EAU53045.1| TPR repeat [Rhodobacterales bacterium HTCC2255]
Length = 688
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 176/593 (29%), Positives = 295/593 (49%), Gaps = 54/593 (9%)
Query: 1 MYN-LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL 59
YN LG + + +D AI YE NP A A NLGV+++ ++ K++ Y+ A+
Sbjct: 97 FYNILGASNAAIFDYDNAIKNYEKITKINPKFANAYFNLGVMFQAKNYFQKSIANYEKAI 156
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
+ PN++ + NN+G GK+D A + EK ++ P +A AYNN+G + + G+ +
Sbjct: 157 FLNPNYADAYNNMGNTLKELGKLDEALKAYEKTLSLVPNHAFAYNNIGNILAELGNRKES 216
Query: 120 IDAYEQCLKIDPDSRNAGQNRLLAMNYI--------------NEGHDDKLF--------- 156
I+A+E+ L I+P+ +A +L ++++ + G D+ +
Sbjct: 217 INAFEKALSINPNYPSALAAKLHQLSHVCAWKEIEKYNSKISDIGIDNDIVTPHFMLSLE 276
Query: 157 ---EAHRDWGKRFMR-LYSQ-YTSWDNT--KDPERPLVIGYVSPDYFTHSVSYFIEAPLV 209
E HR + F++ Y+Q Y N P+R + IGYVS D+ H VSY I L
Sbjct: 277 DSPERHRLRSENFIKDKYNQNYLPKRNIPQTKPKR-IRIGYVSSDFKEHPVSYLIAKVLE 335
Query: 210 YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILV 269
H+ ++V YS + + ++++K +++ + +++ A +++DKIDIL+
Sbjct: 336 SHNKNEFEVYGYSI---SQIQNDNIHKRLVKSFEVFKVLNKKNDEDAALTIQKDKIDILI 392
Query: 270 ELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELI 329
+L G+T N++ G+ A +P+ +Q+ ++GYP T G IDY I D + P + + E +I
Sbjct: 393 DLNGYTENSRPGIFAYRPSNIQINYLGYPGTMGSNFIDYIIADPVLIPNDFNHFYTESII 452
Query: 330 RLPECFLCYTPSPEAGPVCPTPALTNGF------ITFGSFNNLAKITPKVLQVWARILCA 383
R+P Y P+ + + + F I F FNN KIT +W RIL
Sbjct: 453 RMPNS---YMPTDDTRIISNENLSRSEFGLPENEIVFCCFNNNYKITADEFNIWMRIL-- 507
Query: 384 VPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDI 440
+ N + V+ K S + L+ E+ G+ R+ + LP+ H+ +Y L DI
Sbjct: 508 IKNKKSVLWLKKSNKWSKENIQLAAKER-GVNPKRIIFAEKLPI----EKHLASYKLADI 562
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
+DTF Y TT E+L+ G+P +T G A V SLL+ + LK LI +E EY L
Sbjct: 563 FIDTFSYNAHTTATEALWAGLPVITKIGKGFAARVAGSLLSALDLKELITASEIEYENLI 622
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+LASD L ++ L SP+ + + L LE + ++ Y KG+ P
Sbjct: 623 KKLASDPIELNKIKQKLDRNKLSSPLFNSTEYTLHLEKAFVKIYKNYFKGENP 675
>gi|304437899|ref|ZP_07397846.1| TPR domain/SEC-C domain protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369121|gb|EFM22799.1| TPR domain/SEC-C domain protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 311
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 186/307 (60%), Gaps = 4/307 (1%)
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
+W +I + + AA++R D++DILV+L GHT N L ++A +PAPVQVT IGY NTTGL
Sbjct: 3 VWHNIRALSAAEAAALIRRDEVDILVDLAGHTKGNSLPVLAFRPAPVQVTGIGYFNTTGL 62
Query: 304 PTIDYRITDSLADPPETKQKHV-EELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+DY ++D DPP + EE++RLP CY+ + PV P P G +TFGS
Sbjct: 63 SAVDYVLSDVYVDPPGAGDDAMTEEILRLPHSHFCYSLPDDLPPVMPPPMEQRGHVTFGS 122
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FNN K+T +VL +W ++L AVP +RL+VK + F R L + G+ ++RV++
Sbjct: 123 FNNFNKVTDEVLCLWRQLLDAVPGARLLVKSRIFDHGEGRAMVAERLVRCGIPAVRVEMR 182
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ ++ Y +DI+LD FPY G TTCE+L MGVP VT+AG+ H G SLLT
Sbjct: 183 GF---SRGYLAEYGDVDIALDPFPYTGGITTCEALSMGVPVVTLAGTSHGARFGASLLTN 239
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
L L+A+ +YV++A LASD L LRM+LR ++ +P+ D + +E YR+
Sbjct: 240 AHLPELVAQTPADYVRIAAGLASDPATLRALRMNLRTMLRHAPLTDAAGYVHDVEDAYRS 299
Query: 543 MWHRYCK 549
+W R+ +
Sbjct: 300 IWARFVR 306
>gi|326402277|ref|YP_004282358.1| hypothetical protein ACMV_01290 [Acidiphilium multivorum AIU301]
gi|325049138|dbj|BAJ79476.1| hypothetical protein ACMV_01290 [Acidiphilium multivorum AIU301]
Length = 733
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 216/370 (58%), Gaps = 6/370 (1%)
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+RPL IG +S H V + A L D Y++ + D F +++ +
Sbjct: 364 DPDRPLRIGLLSHSLRQHPVGWLTFAGLENLDRDAYELYCFGHFAAGDP----FAQRLAR 419
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG-YPN 299
+ W+D E ++A+ + + IDIL++L+G N +G +A +PAPVQ+ W+G +
Sbjct: 420 RAHKWQDRITKYEAEIASNIADCNIDILIDLSGFGDNGLIGSLAYRPAPVQIKWVGSQAS 479
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TTG+ +D+ ITD P Q + E+L+RLP+ ++CY+P P + PV PAL NG +T
Sbjct: 480 TTGMKRVDWFITDRWETPEGFDQYYTEQLLRLPDGYVCYSPPPTSPPVSNLPALANGHVT 539
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FG FNNL K+T + L +W RIL V N+ L+++C F D + RF+S LG+++ RV
Sbjct: 540 FGCFNNLTKLTDETLSLWGRILEQVDNAHLLLRCPQFSEDGIPERFISRAHALGVDTSRV 599
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+L + + ++ Y +DI+LD FPY+G TTCES++MGVP +T+AG A VS
Sbjct: 600 ELRGRA-PHPEFIEGYKDVDIALDPFPYSGGLTTCESMFMGVPVITLAGDFFAARHSVSH 658
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L+ VGL + ++ ++Y+ A+ ++SD+ ALA R LR+ M SP+CD + F L +
Sbjct: 659 LSNVGLTDCVTESPEQYIDRAVAMSSDLEALAARRARLREQMLTSPLCDAKRFGRNLGAA 718
Query: 540 YRNMWHRYCK 549
R W YC+
Sbjct: 719 LRYAWQDYCR 728
>gi|395232239|ref|ZP_10410490.1| hypothetical protein A936_01262 [Enterobacter sp. Ag1]
gi|394733225|gb|EJF32853.1| hypothetical protein A936_01262 [Enterobacter sp. Ag1]
Length = 1117
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 260/491 (52%), Gaps = 21/491 (4%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
++L Y G+M A + ++ + A Y +GV+ D+ + A + + +
Sbjct: 632 HSLAYSYYQLGEMSLAEKCSRVSLRCDEVKAIHYATMGVILSDSQKLDEAAWFLNKAIAL 691
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ---YTSWDNTKDPERPL 186
+P + + L AM + ++ ++L++ H +G+ + + K+P++ L
Sbjct: 692 EPSNFDYFTALLFAMTHDHKVTAEQLYQKHLQYGETVGAWAAACHLQLPYRGIKNPDKKL 751
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
+G+VS D H VS+F+ D ++++V YS D T F + +WR
Sbjct: 752 RVGFVSGDLRKHPVSHFLAPFWDGLDRNHFELVGYSTSYVHDEVTEHFAAGSV----LWR 807
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
+ + +++A V D IDIL +L+GHT++N+L A +PAPVQ++WIGYP TTGL T+
Sbjct: 808 QVDKLSNQQLAEQVYHDGIDILFDLSGHTSDNRLPAFALRPAPVQISWIGYPGTTGLKTM 867
Query: 307 DYRI-TDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNN 365
DYRI T +LA+P + +Q+ E ++ + E + P P++ + PAL NG++TFGSFN
Sbjct: 868 DYRIVTATLAEPADLEQQLTESIMFI-EMRKFFEPDPQSPDIETLPALKNGYLTFGSFNR 926
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS-VRHRFLSTLEQLGLESLRVDL--- 421
KI +VL+VWA IL P+++ V+ F D + LE LG+ R+
Sbjct: 927 PKKINDEVLRVWASILAQSPDAKFVIG---FMNDEKMVAEMTRKLELLGIAPSRLIFKKR 983
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
PL+ D++ ++ +DI LD FPY+G TT+ + +MGVP +T+ G+ A GV ++
Sbjct: 984 APLL----DYLAYHNEIDILLDAFPYSGGTTSNHACWMGVPTLTLCGATMAARQGVDIMR 1039
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
GL++ IA +E++Y+Q AL + L +RM++R+ M + DG N A R
Sbjct: 1040 IHGLENFIAYSEEDYIQKALSWGDRLPELNEIRMTMRERM-PAETADGFNVAGTFGRALR 1098
Query: 542 NMWHRYCKGDV 552
W YC G+
Sbjct: 1099 EAWRIYCAGEA 1109
>gi|170694349|ref|ZP_02885503.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
gi|170140772|gb|EDT08946.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
Length = 791
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 269/514 (52%), Gaps = 19/514 (3%)
Query: 48 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
LD+A + ++I P+ +++ LGV G+ A +A P A +++LG
Sbjct: 267 LDEAERHARQLIAIAPDHAEAHRILGVTLVALGRRAEAIASCMRAAQLAPRSASVHSSLG 326
Query: 108 VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF- 166
+Y G+I+ A A L+I+P + NA N L + + N + HR +G+
Sbjct: 327 NVYLGIGAIAEAEAALRTALEIEPANSNARTNLLFCLTHSNTISKAAFLKEHRLFGEMHD 386
Query: 167 ---MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVV--Y 221
+ +YT N +DPER L I +VS D+ H+ +Y++ P+V H + ++ + Y
Sbjct: 387 VPAIVASRRYT---NRRDPERKLRIAFVSGDFCNHAAAYYL-LPVVQHLTHDPELSLHFY 442
Query: 222 SAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLG 281
D T EK+ W + + + ++ + +D IDI+++L+GHTA++++
Sbjct: 443 YTFGVNDHLT----EKLRAHADSWHAVADLGDAALSKKIADDGIDIVIDLSGHTAHSRII 498
Query: 282 MMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP-ETKQKHVEELIRLPECFLCYTP 340
+A +PAP+Q +WIGYP TTG+ DY ++D PP + + + VE+L LP + P
Sbjct: 499 ALAHKPAPIQASWIGYPATTGMTAFDYYLSDRFITPPAQFEDQFVEKLALLP-AIAPFMP 557
Query: 341 SPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS 400
P PV PAL G++T+GSFN L K++ +V+ +W+ IL A P+SR+V+ D
Sbjct: 558 PPNCPPVNALPALHKGYVTYGSFNRLNKLSQEVIALWSVILRAEPSSRMVIGAISSKLDE 617
Query: 401 VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG 460
+L G+ + R+ P L +MQ + +D+ LDTFPY G+TTT +L+MG
Sbjct: 618 P--TYLEWFAAEGITADRLTFCPRGSLPL-YMQQHHQVDLCLDTFPYTGSTTTLNALWMG 674
Query: 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDL 520
VP +TM G G L VGL+ I ++++++V+ +L+L D+ AL LR+ +R+
Sbjct: 675 VPTITMPGISMPSRGGACWLEHVGLEQFIVRDKEDFVRKSLELTRDLDALNELRIGMRER 734
Query: 521 MSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
S + A GL R MW R+C P+
Sbjct: 735 CLNSVPFQPEKVAAGLSIALRTMWKRWCADQTPT 768
>gi|148259123|ref|YP_001233250.1| hypothetical protein Acry_0103 [Acidiphilium cryptum JF-5]
gi|146400804|gb|ABQ29331.1| TPR repeat-containing protein [Acidiphilium cryptum JF-5]
Length = 733
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 214/370 (57%), Gaps = 6/370 (1%)
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+RPL IG +S H V + A L D Y++ + D R +V K
Sbjct: 364 DPDRPLRIGLLSHSLRQHPVGWLTFAGLENLDRDAYELYCFGHFAAGDPFAQRLARRVHK 423
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG-YPN 299
W+D E ++A+ + + IDIL++L+G N +G +A +PAPVQ+ W+G +
Sbjct: 424 ----WQDRITKYEAEIASNIADCNIDILIDLSGFGDNGLIGSLAYRPAPVQIKWVGSQAS 479
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TTG+ +D+ ITD P Q + E+L+RLP+ ++CY+P P + PV PAL NG +T
Sbjct: 480 TTGMKRVDWFITDRWETPEGFDQYYTEQLLRLPDGYVCYSPPPTSPPVSNLPALANGHVT 539
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FG FNNL K+T + L +W RIL V N+ L+++C F D + RF+S LG+++ RV
Sbjct: 540 FGCFNNLTKLTDETLSLWGRILEQVDNAHLLLRCPQFSEDGIPERFISRAHALGVDTSRV 599
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+L + + ++ Y +DI+LD FPY+G TTCES++MGVP +T+AG A VS
Sbjct: 600 ELRGRA-PHPEFIEGYKDVDIALDPFPYSGGLTTCESMFMGVPVITLAGDFFAARHSVSH 658
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L+ VGL + ++ ++Y+ A+ ++SD+ ALA R LR+ M SP+CD + F L +
Sbjct: 659 LSNVGLTDCVTESPEQYIDRAVAMSSDLEALAARRARLREQMLTSPLCDAKRFGRNLGAA 718
Query: 540 YRNMWHRYCK 549
R W YC+
Sbjct: 719 LRYAWQDYCR 728
>gi|182679970|ref|YP_001834116.1| hypothetical protein Bind_3065 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635853|gb|ACB96627.1| Tetratricopeptide TPR_2 repeat protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 734
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 245/518 (47%), Gaps = 13/518 (2%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
LG ++ NL +A ++A + P + + G + +++AI +
Sbjct: 213 KLGTQNSEKSNLPQASRLLEVAAKVAPKMALAQYAWGHFLIGHRMYELGLSFVDRAIELD 272
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
P Y + + G I A+ Y + +I PD+ + L + + + L
Sbjct: 273 PLQWAPYLARALGFLGQGRIEEAMGCYRRASEIAPDNIDVAGAPLFTLQHKPGVTEADLL 332
Query: 157 EAHRDWGKRFMRLYSQ-YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQN 215
+AH+ WGK S+ S+ N DP+R IG VS D H+V++
Sbjct: 333 QAHKKWGKLAQPHASKDRLSFTNNPDPQRKPRIGLVSGDMHRHAVAFLTLRAFEQLATLG 392
Query: 216 YKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT 275
Y++ Y K R K K W DI +++ ++A ++ E +IDIL +L GHT
Sbjct: 393 YEIFCYKTDPKRRDDDFSERYKAFAKS--WHDISELNDTELAELIAEQEIDILFDLAGHT 450
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
+ N+L + A + AP+Q+TW GY T GL T D I D + P E ++E +IRLP+C+
Sbjct: 451 SGNRLSLFAMRAAPIQLTWAGYVGTVGLDTYDGIIADPVEIPLEHDSFYLEPVIRLPDCY 510
Query: 336 LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 395
+CY P + V P P G TF FN AK+ +V + W++IL VPN+R+++
Sbjct: 511 VCYHPPTQEVDVGPLPYTKTGTFTFSCFNRPAKLNSEVARAWSKILEQVPNARILMVYGG 570
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLL----PLILLNHDHMQAYS-LMDISLDTFPYAGT 450
S + LE GL RV+L+ L LL +AY+ +D++LD FPY+G
Sbjct: 571 LGEASTQEAIYKVLESGGLARERVELVGETNQLKLL-----EAYAERVDLALDPFPYSGG 625
Query: 451 TTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510
TT E+++MGVP +T G A S LT GL + Y+ LA++ L
Sbjct: 626 VTTLEAMWMGVPTITCVGDTFAGRHSASHLTAAGLADFCTPTVEAYINLAVEWTKRPHEL 685
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
A LR SLRD ++ SP+ + F L+ +W +C
Sbjct: 686 AALRASLRDKVAASPLNNHVLFGHHLDEALTQLWREWC 723
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y+ GVA +F AI +E P A LG + + + + L +
Sbjct: 76 YSHGVALCHFNRFAEAIKAFERELAVIPEHGSALTELGACFARIGRTREGISYLRKGLKL 135
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
P Q+ NLG+ + + A E ++AI + YA+ Y G+ Y
Sbjct: 136 MPYLPQAQFNLGLALLTESRRQEAIEACDRAIELDANYADVYRLRGLAY 184
>gi|27379563|ref|NP_771092.1| hypothetical protein blr4452 [Bradyrhizobium japonicum USDA 110]
gi|27352715|dbj|BAC49717.1| blr4452 [Bradyrhizobium japonicum USDA 110]
Length = 696
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 163/583 (27%), Positives = 277/583 (47%), Gaps = 48/583 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A + + D A +E A F P EA G++ + N D+A + AL+I+
Sbjct: 115 NRGLAELALRQLDRARQSFERALLFQPRNVEALVGKGLVNIELKNFDEAKGALEAALAIR 174
Query: 63 PNFSQSLNNLGVV-------------------------YTVQGK--MDAAAEMIEKAIAA 95
P ++ L N G + +QGK + A +AI A
Sbjct: 175 PGSAKILANRGRLNFEMSRLEQAAADFDAALAISPKLEVALQGKAQVSLAVGNTAQAILA 234
Query: 96 -------NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
NP A A + + + G I+ AI+ + L I D+ G+ ++ ++Y++
Sbjct: 235 CTTLLEENPRSASAMALMSACFANQGEIAPAIELLDAALAIVTDASLIGR-KIFFLDYLS 293
Query: 149 EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+ A W +Q DP+R +VIGYV+ +++ HS + + L
Sbjct: 294 DADFAVQQAARTQWWDAIGVKLAQRKLAPRQFDPDRRIVIGYVAAEFWFHSAGFTLLPVL 353
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+HD+ +++V YS D T +F +W + + + ++A + DK+DIL
Sbjct: 354 AHHDHSKFEIVCYSCSPVRDEVTAKFE----SLADVWVEAGRLSDDQLADRIEADKVDIL 409
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
++++GHT N+L + A +PAP+QV+ G+ TGL T+DY + D + P + E++
Sbjct: 410 IDVSGHTTGNRLPVFARKPAPIQVSGFGHATGTGLRTMDYVLADPVFIPQSARHLLAEKV 469
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP C + P + P P L NG++TFG FN + KI+ + ++VW+R++ V S+
Sbjct: 470 HDLP-CLITIDPILDVPP-SELPMLRNGYVTFGVFNRIYKISDEAIRVWSRVMREVTGSK 527
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL---PLILLNHDHMQAYSLMDISLDTF 445
+++K VR R ++ G+ + L P +H++A++ +DISLDTF
Sbjct: 528 IIIKHTMLDDPLVRDRLIARFVAHGVAEANITCLGSSP----RAEHLRAFANVDISLDTF 583
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
P G +T ESLY GVP V G + G S++ VGL +A ++ Y +A + A+
Sbjct: 584 PQNGGVSTWESLYAGVPVVAKLGKGASSRAGASIVAAVGLADWVADDDAGYAAIACKFAA 643
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
LA LR L ++ SP + + + +E+ YR W YC
Sbjct: 644 QPAHLAKLRADLPAQIAASPAGNVEIYTREVEAGYRQFWRDYC 686
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG++ + + + A E A +P EA NNL +Y + A C + A+++KP
Sbjct: 14 LGLSVQQGGRLEEAQQLLERAIAIDPRSHEAHNNLAAVYVVLQKFEAARACQEKAIALKP 73
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF+ +L LG + A EM ++AI P YA+A+ N G+ + A ++
Sbjct: 74 NFTPALTGLGNTLLNMNLPEQAIEMYDRAIRLKPDYADAFCNRGLAELALRQLDRARQSF 133
Query: 124 EQCLKIDP 131
E+ L P
Sbjct: 134 ERALLFQP 141
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A + LG+ + L++A + + A++I P ++ NNL VY V K +AA
Sbjct: 5 PDHFDATHLLGLSVQQGGRLEEAQQLLERAIAIDPRSHEAHNNLAAVYVVLQKFEAARAC 64
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
EKAIA P + A LG + AI+ Y++ +++ PD +A NR LA
Sbjct: 65 QEKAIALKPNFTPALTGLGNTLLNMNLPEQAIEMYDRAIRLKPDYADAFCNRGLA 119
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y + KF+ A E A P+ A LG + + ++A+E Y A+ +K
Sbjct: 47 NLAAVYVVLQKFEAARACQEKAIALKPNFTPALTGLGNTLLNMNLPEQAIEMYDRAIRLK 106
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + N G+ ++D A + E+A+ P EA G++ + + A A
Sbjct: 107 PDYADAFCNRGLAELALRQLDRARQSFERALLFQPRNVEALVGKGLVNIELKNFDEAKGA 166
Query: 123 YEQCLKIDPDSRNAGQNR 140
E L I P S NR
Sbjct: 167 LEAALAIRPGSAKILANR 184
>gi|338988961|ref|ZP_08633852.1| TPR repeat-containing protein [Acidiphilium sp. PM]
gi|338206109|gb|EGO94354.1| TPR repeat-containing protein [Acidiphilium sp. PM]
Length = 719
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 214/370 (57%), Gaps = 6/370 (1%)
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP+RPL IG +S H V + A L D Y++ + D R +V K
Sbjct: 350 DPDRPLRIGLLSHSLRQHPVGWLTFAGLENLDRDAYELYCFGHFAAGDPFAQRLARRVRK 409
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG-YPN 299
W+D E ++A+ + + IDIL++L+G N +G +A +PAPVQ+ W+G +
Sbjct: 410 ----WQDRITKYEAEIASNIADCNIDILIDLSGFGDNGLIGSLAYRPAPVQMKWVGSQAS 465
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TTG+ +D+ ITD P Q + E+L+RLP+ ++CY+P P + PV PAL NG +T
Sbjct: 466 TTGMKRVDWFITDRWETPEGFDQYYTEQLLRLPDGYVCYSPPPTSPPVSNLPALANGHVT 525
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FG FNNL K+T + L +W RIL V N+ L+++C F D + RF+S LG+++ RV
Sbjct: 526 FGCFNNLTKLTDETLSLWGRILEQVDNAHLLLRCPQFSEDGIPERFISRAHALGVDTSRV 585
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+L + + ++ Y +DI+LD FPY+G TTCES++MGVP +T+AG A VS
Sbjct: 586 ELRGRA-PHPEFIEGYKDVDIALDPFPYSGGLTTCESMFMGVPVITLAGDFFAARHSVSH 644
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L+ VGL + ++ ++Y+ A+ ++SD+ ALA R LR+ M SP+CD + F L +
Sbjct: 645 LSNVGLTDCVTESPEQYIDRAVAMSSDLEALAARRARLREQMLTSPLCDAKRFGRNLGAA 704
Query: 540 YRNMWHRYCK 549
R W YC+
Sbjct: 705 LRYAWQDYCR 714
>gi|365886677|ref|ZP_09425587.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3809]
gi|365337785|emb|CCD98118.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. STM 3809]
Length = 743
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 269/553 (48%), Gaps = 17/553 (3%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M N G+A+ E+ F+ A + A P AE + G +Y + D A + A++
Sbjct: 195 MVNKGLAHLELHHFEQAEATFNAALAARPAHAELRAHRGRLYMLSGHTDAAEADFDAAVT 254
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + ++G + A + + ANP A LG G I+ A+
Sbjct: 255 LDPQLQLGWQGKAQICILKGNVAPAMAACRRVLDANPAAQTALTLLGACLGRLGDIAGAV 314
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD-WGKRFMRLYSQYTSWDNT 179
++Q L + PD A ++ ++++ G D +A R W + + +
Sbjct: 315 AQFDQALAVQPDYDEAITKKIFYLDFL-PGADFAAQQAARQYWWVAVGSKFPRRKLAPRS 373
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
DP R +V+GYVS D+ THS ++ L HD +V YSA + DA T +F+
Sbjct: 374 LDPARRIVVGYVSADFRTHSAAFAFLPVLRGHDKTQVQVNCYSASPRHDAFTAQFKSI-- 431
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+W + + + ++A ++ D +DILV+L+G+T ++ + A +PAP+QVT G
Sbjct: 432 --ADVWVEAANLSDDELADRIQADGVDILVDLSGYTTGTRMPVFARKPAPIQVTAWGSGT 489
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TGL T+DY D + P + E++ LP + P + P P P L NG +T
Sbjct: 490 GTGLATMDYFFADPVTVPEHVRPLFAEQVHDLPSV-ITIDPLLDI-PPSPLPMLQNGHVT 547
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVK----CKPFCCDSVRHRFLSTLEQLGLE 415
FG +N + KI+ + + +WAR+L VP+++LV+K P D + RF+S G+
Sbjct: 548 FGVYNRIDKISDEAIALWARLLAEVPDAKLVIKHLALNDPMVRDGLVARFVSR----GVP 603
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ L +H+++Y +DISLD FP G +T ESLYMGVP V G A
Sbjct: 604 DARLVCLG-ASERSEHLRSYERIDISLDPFPQNGGISTFESLYMGVPVVAKLGLGAASRA 662
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
+LT GL +A ++D Y+++A A+ LA LR L ++++SP D N+
Sbjct: 663 AGGILTAAGLPDWVAADDDGYIRIAKTFAAQPELLAKLRAELPGMVARSPAGDVANYTRC 722
Query: 536 LESTYRNMWHRYC 548
+E+ YR W YC
Sbjct: 723 VEAGYRQFWQTYC 735
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LGV+ +F A F A P+ A+A +NLG + + ++A + +L+
Sbjct: 59 MHLLGVSLVSSARFAEATTFLAQAVALEPNSADAHSNLGWALVNCERYEEARASLERSLA 118
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
++PN +L NL + + +AA +A+ ++++N V
Sbjct: 119 LRPNAPITLRNLTIALLRLKQGEAALANAMRALELKADDVDSWSNRAV 166
>gi|121611313|ref|YP_999120.1| hypothetical protein Veis_4399 [Verminephrobacter eiseniae EF01-2]
gi|121555953|gb|ABM60102.1| TPR repeat protein [Verminephrobacter eiseniae EF01-2]
Length = 727
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 232/444 (52%), Gaps = 16/444 (3%)
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR-L 169
R+ G + A+ Q + + P + NRLL M + L +A RD+ L
Sbjct: 159 RELGQVRQAVQDCLQAIALTPGDLSNHTNRLLFMLADPQADAASLAQAARDYAAVVEPPL 218
Query: 170 YSQYTSW-DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
+ + ++ P R L +G++SPD+ THSV YF+E L D + ++V + + D
Sbjct: 219 KPHWPGFAEHQGAPWRRLRVGFLSPDFRTHSVMYFVEGLLAQLDRRQFEVFAFYLFPRDD 278
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
T E+V + + + G+ ++ A +R +IDIL++L GHT N L MA + A
Sbjct: 279 PVT----ERVRRHADRFVRLAGLGAEQQAQAIRAQRIDILIDLAGHTGYNGLQAMAHKAA 334
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG--- 345
PVQV+W+G+P TTGL +DY+++D + DPPE + + E+L RLP F CY P
Sbjct: 335 PVQVSWLGFPATTGLQAVDYKLSDEITDPPEAQAHYTEQLYRLPTLFACYRPMSRHPLWR 394
Query: 346 -----PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS 400
V PTPAL G ITFG NNL K+ +VL +W ++L A+P++RL+++ K
Sbjct: 395 YQPRYQVQPTPALDKGHITFGCCNNLGKLGDEVLALWGQLLQALPDARLLIEGKNLDGPD 454
Query: 401 VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG 460
+ + LGL+ R++L + + Y +DI+LD FP G TTT ++L+MG
Sbjct: 455 FAGAYRQRCQGLGLDPERLEL--VAQQGDNQYLTYHRIDIALDPFPLVGGTTTFDALWMG 512
Query: 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDL 520
+P V+M G +G+ LL+ +G +A +Y+++A LA+D AL LR+ LR
Sbjct: 513 LPVVSMVGQSFKSRMGLGLLSYLGRTEWLAATPADYLRIACALAADRQALNRLRLGLRAE 572
Query: 521 MSKSPVCDGQNFALGLESTYRNMW 544
+ +S + F R MW
Sbjct: 573 VERSVLMREDLFNHHFGEGLRAMW 596
>gi|402302446|ref|ZP_10821558.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC9]
gi|400380513|gb|EJP33330.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC9]
Length = 497
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 219/412 (53%), Gaps = 13/412 (3%)
Query: 138 QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFT 197
N L+ ++Y + D L E H WG R++ + + K + IGY+SP
Sbjct: 94 SNYLMTLHYAADVSDAFLREEHSAWG----RIFGDVPQFSHEKRRRAKIRIGYLSPSLSE 149
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
H V F +D + V +YSA D T + + +R++ G+ E A
Sbjct: 150 HVVLNFAVPLFSGYDRTGFDVRIYSAGGADDDVT----DWIAGMVDGYRNLAGMPETAAA 205
Query: 258 AMVREDKIDILVELTGHTANNK-LGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLAD 316
A + D+IDIL +L GHTA + L + A +PAPVQ+T IGY +TTG+P IDY + D + D
Sbjct: 206 AAIHADEIDILFDLAGHTAGGRTLRIAAYKPAPVQITGIGYFDTTGVPAIDYVLGDPVCD 265
Query: 317 PPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQV 376
PP ++ E+++RLP LC+TP P + + FGSFNN +KIT L++
Sbjct: 266 PPGMEELFFEKILRLPHTHLCFTPPERFAPYENIVRRPHMPVVFGSFNNFSKITDDTLRL 325
Query: 377 WARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS 436
WA+IL AVP++RLV+K + + R + + ++ R+D+ D+++ Y
Sbjct: 326 WAKILHAVPDARLVLKNVNDDAEPL-ERMRARAARADIDLRRIDVRSG---TRDYLRDYL 381
Query: 437 LMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEY 496
+DI LDT+PY G TTCE+L MG+P VT AG+ H G S+L GL L+A D Y
Sbjct: 382 DVDIILDTYPYQGGGTTCEALLMGLPVVTRAGTRHGARFGTSILYNAGLGELVADTADAY 441
Query: 497 VQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
V+ A LA D LA L ++R +M SP+ DG + +E YR +W RY
Sbjct: 442 VERAALLARDGELLAALHGAVRRMMRASPLMDGAQYVWDMEEAYRMIWERYL 493
>gi|402302439|ref|ZP_10821551.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC9]
gi|400380506|gb|EJP33323.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC9]
Length = 516
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 225/407 (55%), Gaps = 18/407 (4%)
Query: 141 LLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSV 200
LLA N E + +LF AH +G+ F + QYT + + + E+ + +GY+SPD+ + +
Sbjct: 115 LLAQN-AREVDESELFAAHCAYGELFADV-PQYT-FPSPRRHEK-IRVGYISPDFRRNVM 170
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
FI+ L +D +++V VYS + D T R +WRD+ + + A +
Sbjct: 171 QNFIQPLLTAYDRAHFEVYVYSTAAEPDEVTAALR----PYADVWRDMGDMSPVETAQRI 226
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP-E 319
R D+ID+LV+L GH A L ++A +PAPVQ+ +GY T+GL T+D +TD + DPP E
Sbjct: 227 RADEIDVLVDLAGHAAGGALPVLAHRPAPVQMLGLGYTATSGLRTVDAFLTDVVCDPPGE 286
Query: 320 TKQKH-VEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWA 378
+++ EE + LP F CY P TPA +G I FG FN K T ++L VW
Sbjct: 287 GHERYFTEEFVHLPSQF-CYVPPAHLPASRGTPARQSGSILFGVFNQYRKFTDEMLIVWR 345
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD--HMQAYS 436
IL VP SRL++K + F +R + L +LG + RV +L + D +M+ Y
Sbjct: 346 EILERVPASRLLLKSQVFFAPEMRAAAVERLRRLGFDPRRV-----LLESADTGYMRRYL 400
Query: 437 LMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEY 496
+DI+LDTFP+ G TTC++LYMGVP VT + + G +LL+ +GL L A + + Y
Sbjct: 401 DVDIALDTFPWPGGGTTCDALYMGVPVVTRYAARRSTRFGYALLSHMGLAELAADSAEGY 460
Query: 497 VQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
+ A LA D+ L L LR +M++SP+ D + + LE YR
Sbjct: 461 IARAALLAGDLDTLDALHRGLRGMMARSPLMDQKGYMRALEDAYRRF 507
>gi|114319860|ref|YP_741543.1| FkbM family methyltransferase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226254|gb|ABI56053.1| methyltransferase FkbM family [Alkalilimnicola ehrlichii MLHE-1]
Length = 921
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/514 (29%), Positives = 247/514 (48%), Gaps = 12/514 (2%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
++ D A+ + A P + L + + A +++ + I P A+ N+
Sbjct: 117 NHTDDALGFLRRAAEKAPEHRRLQALLAQALVKANRREQARDILVELIKTQPD-ADTLNS 175
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165
LG + D G + ++P + N L+ +Y+ L + H W
Sbjct: 176 LGHVLFDLGDGEAGFQQLQLAGVLEPGNHVLWSNILMMAHYLPSQSARDLRKLHARWYAN 235
Query: 166 FMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL-VYHDYQNYKVVVYSAV 224
++ +DPERPL IG++S + +H + + Y ++ + +YS
Sbjct: 236 CAAHLETERHFERDRDPERPLRIGFISNGFHSHPAGWLSFGAINTLARYFDHTLHLYSTA 295
Query: 225 VKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMA 284
+ R + M G W + ++ + A + +D++DILV++TGH+ + L +A
Sbjct: 296 PPRPKDFLSHRFQNMT--GHWCQMVHWSQEAIHAQLLKDRLDILVDMTGHSGYSALSAIA 353
Query: 285 CQPAPVQVTWIG-YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPE 343
+ APVQV W+G NT+ +PTIDY +TD + P ++ + E+LIRLP ++ Y P P
Sbjct: 354 RRAAPVQVKWVGGLFNTSAVPTIDYLLTDWMETPEGVEEFYTEKLIRLPTGYVTYAPPPY 413
Query: 344 AGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH 403
+ P PA NG+ITF NNL K+ ++ VWA IL AVP+SRL++K K R
Sbjct: 414 LPDIAPLPAKENGYITFACMNNLHKVNREIAGVWAGILKAVPDSRLLIKDKKLSDPGARK 473
Query: 404 RFLSTLEQLGLESLRVDL---LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG 460
+ L + G+ R+ L P L ++ Y +DI+LD +PY+G TT E LYMG
Sbjct: 474 QLWHMLVEAGVPDTRLILEEGAPHRYL----LETYHRVDIALDPWPYSGGLTTIEGLYMG 529
Query: 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDL 520
VP +T G A S L GL IA + +Y Q+A++ A D+ L LR LR
Sbjct: 530 VPVITCPGPTFAGRHAASHLHNSGLDQFIAADFHDYKQIAVETAGDIEKLEALRAGLRKQ 589
Query: 521 MSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
SP+ + FA L+ +R +W R+C P+
Sbjct: 590 CQNSPLGNHAQFATNLDRAFRTIWRRWCADAQPA 623
>gi|425449527|ref|ZP_18829366.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
7941]
gi|389763752|emb|CCI09797.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
7941]
Length = 1038
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 171/598 (28%), Positives = 281/598 (46%), Gaps = 49/598 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ D AI+ + A N + A A NNLG++ + +D L AV +Q A+
Sbjct: 446 NLGIIAVSKGDLDEAIICFNQAIRSNQNYAFADNNLGLVLQMQDKLGDAVVNFQEAIRKN 505
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN+ ++ NLG V +QGK++ A + AI NP Y +AYN+L + + A+
Sbjct: 506 PNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIKLNPKYIKAYNSLALALGRQDKVEAAMSV 565
Query: 123 YEQCLKIDPDS-------------------RNAGQNRL--LAMNYINEGHDDKL--FEA- 158
++Q L I P+S R A +L L N + EG + F++
Sbjct: 566 FKQALAIQPNSPEAFACLFSMKEMTCNWETREADLIQLWQLTENQLQEGKSTAVTPFDSL 625
Query: 159 HRDWG---------------KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ W KR + L ++ ++++++ L IGY+ D+ H S+
Sbjct: 626 YKPWSATQQLKVASNYAQEIKRQLALITKPLNFNHSRTRSGRLKIGYLCHDFRNHPTSHL 685
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
+++ HD N++++ YS ++ +R ++ + DI + + A + D
Sbjct: 686 MQSVFGLHDRNNFEIIAYSYGPDDGSE---YRRRIANDCDRFYDIATLSITESAQRIFHD 742
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
+ ILV+L G+ + ++A +PAP+QV ++ YP T G IDY I D++ PPE+
Sbjct: 743 GVHILVDLMGYIDKARTQILALKPAPIQVNYLVYPGTMGADFIDYIIGDAIVTPPESADD 802
Query: 324 HVEELIRLPECFLC--YTPSPEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARI 380
E+L+ LP+ + Y + PV + L F FN+ KI P+V VW +I
Sbjct: 803 FTEKLVILPDSYQANDYQQIISSKPVTRSHYGLPESGFVFCCFNHTYKIEPQVFTVWMQI 862
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L VP S L + + ++ R + G+E R+ + + +H+ + L D+
Sbjct: 863 LANVPGSVLWLFSRVAEAEANLRR---EAKARGIEGDRL-IFAHLEPKSEHLARHQLADL 918
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LDT Y TT ++L+ G+P +T G+ VG SLLT +GL LI KN +EY LA
Sbjct: 919 FLDTLYYNAHTTGSDALWAGLPIITCPGATFPSRVGASLLTAIGLPELITKNLEEYKNLA 978
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
+ LA L ++ L P+ D +F LE YR MW Y G P + R+
Sbjct: 979 INLAKSPDKLHKIKQKLAQNRLTYPLFDTLHFTRNLEKAYRTMWDIYAAGKSPEMIRI 1036
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 5/154 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LGV + + D AI+ Y+ A NP+ AE+ NNLG+I + +LD+A+ C+ A+
Sbjct: 411 HQLGVIMDSLGQIDQAILAYKQALLINPNYAESHNNLGIIAVSKGDLDEAIICFNQAIRS 470
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
N++ + NNLG+V +Q K+ A ++AI NP Y EA+ NLG + + G I AI
Sbjct: 471 NQNYAFADNNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEAHFNLGNVLQLQGKIEEAIA 530
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
++ +K++P A + LA+ G DK+
Sbjct: 531 YFQTAIKLNPKYIKAYNSLALAL-----GRQDKV 559
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y + LK + AI Y+ + +P A A + LGVI +D+A+ Y+ AL
Sbjct: 376 LYRQAYTLQKQLKLEEAIALYQQLINQSPQYAAAWHQLGVIMDSLGQIDQAILAYKQALL 435
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I PN+++S NNLG++ +G +D A +AI +N YA A NNLG++ + + A+
Sbjct: 436 INPNYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNYAFADNNLGLVLQMQDKLGDAV 495
Query: 121 DAYEQCLKIDPD 132
+++ ++ +P+
Sbjct: 496 VNFQEAIRKNPN 507
>gi|357059079|ref|ZP_09119924.1| hypothetical protein HMPREF9334_01641 [Selenomonas infelix ATCC
43532]
gi|355372987|gb|EHG20325.1| hypothetical protein HMPREF9334_01641 [Selenomonas infelix ATCC
43532]
Length = 561
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 259/536 (48%), Gaps = 26/536 (4%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AEA L ++ + +A+ ++ + P ++ ++ + G+ AA ++
Sbjct: 42 AEAAGLLTALHIEAGRTREALAAWRECARLVPRDPYTIFLRARIHFLAGERTAALNLLTP 101
Query: 92 AIAAN--PTYAE-AYNNLGVLYRDAGSISLAIDAYEQCLKIDPD----SRNAGQNRLLAM 144
+ A P E YN G R G + A+ YE+ PD + NA N L
Sbjct: 102 LLDAQLPPAITEKVYNIAGQCARFLGRAAEAVRFYERARDAAPDRVLRALNA-SNVLFNR 160
Query: 145 NYINEG-HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP--ERPLVIGYVSPDYFTHSVS 201
+Y++ +DK A ++G L++ ++D+T ER L IGY+SPD H V
Sbjct: 161 HYLSTSLAEDK--SAAEEYGA----LFADVHTFDHTAHEMGERRLRIGYISPDVREHVVL 214
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
F A + D ++V VY A+ DA T E+V +R++ ++ A +
Sbjct: 215 SFSYALMTVLDPARFEVTVY-ALNAEDAYT----ERVKHATEHFRNLMCCSAEEAAHAIF 269
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D IDILV+L GHTA L ++A +PAPVQ++ IGY +TGL T+DY + D + +
Sbjct: 270 RDGIDILVDLAGHTAGRTLPILAYRPAPVQISGIGYFASTGLRTVDYFLADPVLAAGTAE 329
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
+ EEL+ LP C+ P A P + FGSFNN K++ VL+ WA IL
Sbjct: 330 EGFTEELLVLPHSHFCWQPLHAA-PAPAHEPAEGRVVVFGSFNNFTKLSDTVLRTWAEIL 388
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
VP SRL++K F C R L + G+ S RV+ + ++ AY+ +DI+
Sbjct: 389 RRVPESRLLLKTDVFSCPDAREEALRRIMAAGIPSERVETEGT---SQGYLAAYNRVDIA 445
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LD FPY G TTC++LYMGVP VT+AG G SLL +G LIA E+EY LA
Sbjct: 446 LDPFPYPGGGTTCDALYMGVPVVTLAGESLGSRFGASLLENIGAGALIAHTEEEYTALAA 505
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKR 557
LA D + L LR +M SPV D + + + Y +W Y + R
Sbjct: 506 ALAGDPATIDALHAGLRGMMENSPVMDAAGYGSDVGAAYEAVWTFYMTKETAGGSR 561
>gi|383755282|ref|YP_005434185.1| hypothetical protein SELR_24540 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367334|dbj|BAL84162.1| hypothetical protein SELR_24540 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 562
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 212/400 (53%), Gaps = 30/400 (7%)
Query: 154 KLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
K F HR K F+R +GY+S D+ H F L +D
Sbjct: 177 KPFHHHRGREKHFLR-------------------VGYISADFRRHVCLCFFYDLLTSYDR 217
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ + V VY + TI EK+ K+ WR++ G+ ++ A + ED+IDILV+L G
Sbjct: 218 KKFAVYVY---MLGPEDTIS--EKLRKQVTGWRNLRGLSPQESAKAIYEDEIDILVDLAG 272
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK---QKHVEELIR 330
HT N L ++ +PAP+QV+ IGY +TGL ++DY + D D + + ++ EEL+
Sbjct: 273 HTKGNGLPILVYKPAPIQVSGIGYFASTGLSSVDYFLGDVYLDGEDGQTGQREFTEELVV 332
Query: 331 LPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
LP CY P T G++TFGSFNN AK+T +VL VW +IL +P + L+
Sbjct: 333 LPHSHFCYRPLQAVPLPVDTAFSRKGYVTFGSFNNFAKVTDEVLMVWGKILNRLPTAHLL 392
Query: 391 VKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT 450
+K F + +E+ GL RV+ + + ++ Y +DI+LDTFPY G
Sbjct: 393 LKAAVFDSEEAAIYIRQRMEKAGLPMARVECRGI---SEVYLPEYGDIDIALDTFPYPGG 449
Query: 451 TTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510
T+C++LYMG P +T+AG H G SLL + L L+A + +EY++ A+ LA + L
Sbjct: 450 GTSCDALYMGRPLITLAGKRHGERFGYSLLMNLDLGELVAFSIEEYIERAVMLAENPELL 509
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
L+ +LR +M SP+ D Q + +ES Y +MW +Y KG
Sbjct: 510 TGLQTNLRHIMENSPLMDRQGYVRMVESVYADMWEKYEKG 549
>gi|347736536|ref|ZP_08869150.1| TPR repeat-containing protein [Azospirillum amazonense Y2]
gi|346919949|gb|EGY01259.1| TPR repeat-containing protein [Azospirillum amazonense Y2]
Length = 525
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 252/518 (48%), Gaps = 10/518 (1%)
Query: 16 MAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVV 75
+A ++ A P +A LG++ + D +A+ + P+ + + G +
Sbjct: 8 LAEQLFQRAMALEPGAGQAMLGLGLLMRRLDRGQEALALLEWCARDLPDSALAQAAYGDL 67
Query: 76 YTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN 135
G+ AA + +A P + LG RD G I A+ A + + P +
Sbjct: 68 LLAMGRPAAALTHVRRAQEMAPDDPDILLTLGNALRDVGEIDAALAALAHAVDMAPGRAD 127
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDY 195
N + + ++ H W +R ++Q L IG VS D+
Sbjct: 128 IHSNLVYTRLFHPTVTLAQVRAEHIAWAQR----HAQPVPPAPPAGDHGALRIGLVSGDF 183
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H V YFI L + +V Y+ D T R + WR I G+D
Sbjct: 184 RNHPVGYFIIRALEALARRGVTLVAYANQRVEDDITRRVQAVCA-----WRPIQGLDAPT 238
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
VA VRED IDIL++L GH A N+L + A +PAP Q TW GY TTGL +D I D
Sbjct: 239 VARHVREDGIDILIDLAGHIAGNRLDVFALRPAPRQATWAGYMATTGLAQMDLIIADPHH 298
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQ 375
PPE ++ + E + R+P FLCY P A + P PA NG +TFG FN AK+ +V+
Sbjct: 299 IPPEAEEFYTERVARMPHSFLCYDPPAAAPAMTPPPAEGNGHVTFGCFNIAAKLNAEVIA 358
Query: 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
WA+IL VP SRL++K + V+ R L G+++ R+D L +H+
Sbjct: 359 CWAQILNRVPGSRLLLKSRGLDEAPVQARILEQFRAGGIDAARLDFLGAT-PQAEHVACM 417
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+DI+LD FP+AG+TTT ESL+MG+P VT+ G + L+ +GL L+A ++
Sbjct: 418 QRVDIALDPFPFAGSTTTLESLWMGLPVVTLTGQTFSARHSTCFLSVLGLTSLMATTVEQ 477
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
YV +A +LA++ +A+LR LR M+ SP+CD + FA
Sbjct: 478 YVDIAARLATNPEEVADLRQRLRPAMAASPLCDAEAFA 515
>gi|50120665|ref|YP_049832.1| hypothetical protein ECA1732 [Pectobacterium atrosepticum SCRI1043]
gi|49611191|emb|CAG74637.1| hypothetical protein ECA1732 [Pectobacterium atrosepticum SCRI1043]
Length = 1139
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 244/499 (48%), Gaps = 23/499 (4%)
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N + + N + +VY M A IEKA+ P A N + ++ + AI+ Y
Sbjct: 648 NIAVAWNVVALVYLKFENMAGAEVCIEKAMKLLPNDAAILNAMAMVLDKKSDVESAIEYY 707
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWG----KRFMRLYSQYTSWDNT 179
Q + P+ + N L A+ + + ++F H +G KR L +
Sbjct: 708 RQAVSNAPEDLSLYSNLLFALLHNAKIPASEIFAEHLLYGDVVEKRNGALAP--VRYLQN 765
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
KDP+R L IG+VS D ++H VS F+ D+Q++ + YS D T R EK
Sbjct: 766 KDPDRVLRIGFVSGDLYSHPVSKFLSPVWNDIDHQHFSLYAYSTSHHHDDVT-RMLEK-- 822
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+WR++ + ++ +++ D+IDIL +L+GHT +N+L M A +PAP+Q++WIGYP
Sbjct: 823 -NSTVWRNVASSSDTELFDLIKRDEIDILFDLSGHTGDNRLSMFAMKPAPIQISWIGYPG 881
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TTGL +DY + + A PE E + + P V PALTNG++T
Sbjct: 882 TTGLKAMDYYLVMNHAPYPEVLAHQFTEKLLYVLFDRQFEPVVNGPEVNDLPALTNGYLT 941
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPF--CCDSVRHRFLSTL---EQLGL 414
F SFN KI VL W +IL +P S++++ P D +R + S EQL
Sbjct: 942 FASFNRPTKINDTVLSAWGKILVQLPTSKMIIGALPSLQTRDLIRKKLESQGVQPEQLIF 1001
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
RV+++ + ++ + +D+ LDTFPY G TTT +L+MGVP +T+AG +A
Sbjct: 1002 RE-RVNIMNYLAMHQE-------IDVLLDTFPYTGGTTTNYALWMGVPTLTLAGETYAAR 1053
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
GV L + GL IA +E +Y+ A+ + + L +R SLR M A
Sbjct: 1054 QGVVNLGQAGLNEFIAHSEADYIDKAISCNNRLDELNQIRHSLRKKMEYDIDTSDATAAT 1113
Query: 535 GLESTYRNMWHRYCKGDVP 553
E R +W YC G P
Sbjct: 1114 YFEQALRTVWKAYCDGQPP 1132
>gi|392979707|ref|YP_006478295.1| putative SAM-dependent methyltransferases/O-linked
N-acetylglucosamine transferase [Enterobacter cloacae
subsp. dissolvens SDM]
gi|392325640|gb|AFM60593.1| putative SAM-dependent methyltransferases/Predicted O-linked
N-acetylglucosamine transferase [Enterobacter cloacae
subsp. dissolvens SDM]
Length = 1111
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 252/526 (47%), Gaps = 25/526 (4%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
+L + + + L + Q L + N + N L VVY + M A +++ N
Sbjct: 592 DLATVLQKKGELHYSARILQALLRLNKNNASFWNTLAVVYHSRRNMAMAERCARESLRYN 651
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
T +G++ D ++ A E+ L+ P + + L + + + LF
Sbjct: 652 ATNPLHLAMMGIILSDNQKLTEARYFLEKSLEFAPGDFDCFTSLLFVLTHDFSISPEVLF 711
Query: 157 EAHRDWGK---RFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
E H +G+ + + + W +KDPERPL +G+VS D+ H VS F+ D
Sbjct: 712 ERHLAYGELVSAWAKKFGLALPWQGSKDPERPLRVGFVSGDFRNHPVSRFLRPFWDGMDR 771
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ + + YS + K DA T FR K W + ++ ++A + D IDIL +L+G
Sbjct: 772 KQFSLYGYSTLDKDDAVTEHFRSTSTK----WLSVTDLNNVELAKQIHSDGIDILFDLSG 827
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR-ITDSLADPPETKQKHVEELIRLP 332
HT +L A +PAPVQ+TW+GYP TTG+ +DYR I+ + E+LI +P
Sbjct: 828 HTTGTRLPAFAFKPAPVQITWLGYPGTTGMTQMDYRIISTGFVRNAAIDAQFTEKLIAIP 887
Query: 333 -ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV 391
+ F + P + V PAL NG+ T+GSFN K+ +V +WARIL SRL++
Sbjct: 888 LDNF--FEPDASSPAVNALPALKNGWFTYGSFNRPKKLNDRVFALWARILQHNATSRLLI 945
Query: 392 KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM----DISLDTFPY 447
D++ R+ L LG+ + LI M+AY M D+ LD+FPY
Sbjct: 946 GF--MDDDAMIARYRKKLNALGVPDEQ-----LIFRKTTGMEAYLHMHHEVDMLLDSFPY 998
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G TTT ++MGVP +T+AG+ + G+ ++ GL +A ++ +Y A++ + +
Sbjct: 999 NGGTTTSHGIWMGVPTLTLAGATYPARQGLEIMHIYGLDEFVADSQQDYFDKAVRWQTQL 1058
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L LR ++R S P N A+ + R W ++C + P
Sbjct: 1059 ETLDALRQNMR---STIPPQGQSNVAIPFQQALREAWRKWCADEAP 1101
>gi|320530497|ref|ZP_08031555.1| hypothetical protein HMPREF9555_01659 [Selenomonas artemidis F0399]
gi|320137330|gb|EFW29254.1| hypothetical protein HMPREF9555_01659 [Selenomonas artemidis F0399]
Length = 487
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 216/413 (52%), Gaps = 15/413 (3%)
Query: 138 QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFT 197
N L+ ++Y + D L E H WG R++ + + K + IGY+SP
Sbjct: 84 SNYLMTLHYAADVSDAFLREEHGAWG----RIFGDVPQFSHEKRRRAKIRIGYLSPSLSE 139
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
H V F +D + V +YSA D T + + +R++ G+ E A
Sbjct: 140 HVVLNFAVPLFSGYDRTGFDVRIYSAGGADDDVT----DWIAGMVDGYRNLAGMPETAAA 195
Query: 258 AMVREDKIDILVELTGHTANNK-LGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLAD 316
A + D+IDIL +L GHTA + L + A +PAPVQ+T IGY +TTG+P IDY + D + D
Sbjct: 196 AAIHADEIDILFDLAGHTAGGRTLRIAAYKPAPVQITGIGYFDTTGVPAIDYVLGDPVCD 255
Query: 317 PPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQV 376
PP ++ E+++RLP LC+TP P + + FGSFNN +KIT L++
Sbjct: 256 PPGMEELFFEKILRLPHTHLCFTPPERFAPYENIVRRPHMPVVFGSFNNFSKITDDTLRL 315
Query: 377 WARILCAVPNSRLVVKCKPFCCDSVRHRFL-STLEQLGLESLRVDLLPLILLNHDHMQAY 435
WA IL AVP +RLV+K D+ + + + ++ R+D+ D+++ Y
Sbjct: 316 WAEILHAVPEARLVLKN--VNADAAAPELMRARAARADIDLRRIDVRSG---TRDYLRDY 370
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+DI LDT+PY G TTCE+L MG+P VT AG+ H G S+L GL L+A D
Sbjct: 371 LDVDIILDTYPYQGGGTTCEALLMGLPVVTRAGTRHGARFGTSILYNAGLGELVADTADA 430
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
YV+ A LA D LA L ++R +M SP+ DG + +E+ Y +W Y
Sbjct: 431 YVERAALLARDGELLAALHGAVRRMMRASPLMDGAQYVRDMEAAYETIWEHYL 483
>gi|227329190|ref|ZP_03833214.1| hypothetical protein PcarcW_18382 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 1087
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 239/492 (48%), Gaps = 21/492 (4%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N + +VY M A IEKAI P A N + ++ + AID Y + +
Sbjct: 602 NVVALVYLKFENMAGAEVCIEKAIKLLPNDAAVLNAMAMVLDKKSDVESAIDYYRKAVTN 661
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT--SWDNTKDPERPLV 187
P+ + N L A+ + + ++F H +G+ + + KDP+R L
Sbjct: 662 APEDLSLYSNLLFALLHNAKIPASEIFSEHLSYGEVVEKRNGALAPVHYLQNKDPDRVLR 721
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
+G+VS D ++H VS F+ D+Q++ + YS D T R EK WR+
Sbjct: 722 VGFVSGDLYSHPVSKFLSPVWNDIDHQHFSLYAYSTSHHYDDVT-RMLEK---SSTAWRN 777
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
+ + ++ +++ D+IDIL +L+GHT +N+L M A +PAP+Q++WIGYP TTGL +D
Sbjct: 778 VASSSDTELFELIKRDEIDILFDLSGHTGDNRLSMFAMKPAPIQISWIGYPGTTGLKAMD 837
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLA 367
Y + + A PE E + + P V PALTNG++TF SFN
Sbjct: 838 YYLVMNHAPYPEVLAHQFTEKLLYVLFDRQFEPVVNGPEVNDLPALTNGYLTFASFNRPT 897
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE------SLRVDL 421
KI VL W +IL +P S++++ P R LE G++ RV++
Sbjct: 898 KINDTVLSAWGKILVQLPTSKMIIGALPSM--QTREHIRKKLEAQGVQPEQLIFRERVNI 955
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ + ++ + +D+ LDTFPY G TTT +L+MGVP +T+AG +A GV L
Sbjct: 956 MNYLAMHQE-------IDVLLDTFPYTGGTTTNYALWMGVPTLTLAGETYAARQGVVNLG 1008
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+ GL IA +E +Y++ A+ + + L +R SLR M + + R
Sbjct: 1009 QAGLNEFIADSEADYIEKAISWNNRLDELNQIRHSLRKKMEHDIDTADVTASTYFQQALR 1068
Query: 542 NMWHRYCKGDVP 553
+W YC G+ P
Sbjct: 1069 TVWKAYCAGEPP 1080
>gi|91776987|ref|YP_546743.1| tetratricopeptide TPR_2 [Methylobacillus flagellatus KT]
gi|91710974|gb|ABE50902.1| Tetratricopeptide TPR_2 [Methylobacillus flagellatus KT]
Length = 552
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 263/531 (49%), Gaps = 27/531 (5%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
++A G+ + N +A+ Y +L Q+ +G ++ K AAE +E
Sbjct: 9 SQALFKAGLAAEAEHNYLEALSKYTASLEAGNGQIQTWLRIGNLFLRTMKYQQAAETMEF 68
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN--- 148
+ +P EA L + Y G E C ID + A N A++ N
Sbjct: 69 VLGMDPQNIEAIYGLAIAYFYLGRHE------EACAFIDHVAETAPDNATYALDRANIHS 122
Query: 149 -----EGHDDKLFEAHRDWGKRFMRLYSQY-TSWDNTKDPERPLVIGYVSPDYFTHSVSY 202
+L+EA WG+RF ++ ++D+ + P+R L IGYVS D H+V+Y
Sbjct: 123 LARPDPARKRQLYEA---WGQRFADPLGKHPAAFDHDRAPDRVLRIGYVSGDMRHHAVAY 179
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
F+E +HD + VY+ + DA T R R+ V W D+ ++++ + A++R+
Sbjct: 180 FMEPVFAHHDPAQVETFVYATSREQDAVTERLRQYVPH----WHDVSRLNDEALHALIRQ 235
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT-GLPTIDYRITDSLADPPETK 321
KIDILV+L+GHT N+L + A + APVQVTW+GY +T G+ +DYR+TD DP +
Sbjct: 236 HKIDILVDLSGHTHGNRLFVFARRAAPVQVTWLGYVGSTLGMQGMDYRLTDWGMDPAGNE 295
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI-TFGSFNNLAKITPKVLQVWARI 380
+ +VE+L RL C Y P P+ P+ P P + G T S N+ K+T L VW +I
Sbjct: 296 RYYVEKLFRL-HCMASYIP-PDDAPLEPVPPMLQGNPPTLASLNSSRKLTDSALLVWKQI 353
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L A +++L++ + + + L +LGL R+ + P++ + + M ++DI
Sbjct: 354 LEARLDAQLLIHVQEKSVEDAVNTIEPRLIRLGLPLDRIIVSPMVPME-EFMTRGQIVDI 412
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
+LD+FP +G TTT +L+MG+P + M + S L +GL +A E+ YV
Sbjct: 413 ALDSFPVSGGTTTLHTLWMGLPIIAMDATDAVSASTASTLKGLGLHDWVAATEEAYVAKV 472
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
L L L R R L+ +S + D LE+ YR +W + G+
Sbjct: 473 LHLLDHPEYLVEHRARARQLLQQSVLMDYAGRCRDLETAYRQLWLNHLLGE 523
>gi|146312166|ref|YP_001177240.1| methyltransferase type 12 [Enterobacter sp. 638]
gi|145319042|gb|ABP61189.1| Methyltransferase type 12 [Enterobacter sp. 638]
Length = 1116
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 261/525 (49%), Gaps = 52/525 (9%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A N L IY +R + A +C + ++ I + L+ LG++ + K+ A +EK
Sbjct: 628 ANCWNLLACIYHERREIAIAEKCARHSIRIHADVPYFLSILGIILSDNQKITDARYFLEK 687
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
A++ +AY +L + S+S A
Sbjct: 688 ALSLKSPDFDAYTSLLFVMSHDASVSPA-------------------------------- 715
Query: 152 DDKLFEAHRDWGKRFMRLYS--QYT-SWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+LF AH+ +G + + Q T + KDP R L IG+VS D H VS F
Sbjct: 716 --ELFAAHQKYGHQVNEWCASQQVTITHGGNKDPHRKLRIGFVSGDLRIHPVSNFFLPFW 773
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
D Q++ ++ YS + + D R+ + +WR + ++A + ED+IDIL
Sbjct: 774 NNLDRQHFDLIAYSTIDRPD----HVRDHYEQTATVWRMATEYSDAELAKQIAEDQIDIL 829
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD-SLADPPETKQKHVEE 327
++L+GHT ++L + +PAPVQ+TWIGYP TTGL +DYRIT L P E ++ E+
Sbjct: 830 IDLSGHTTGSRLPVFGFKPAPVQMTWIGYPGTTGLEQMDYRITTPGLGKPGEMDDQYTEK 889
Query: 328 LIRLP-ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
L+ +P F + PS + + P PAL+NG+ T+GSFN K+ V VWA+I+ P
Sbjct: 890 LLYMPLRSF--FAPSELSPDINPLPALSNGYFTYGSFNRPKKLNNDVFAVWAQIMTRNPT 947
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLG-LESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
++L++ D + R+ L LG LES + L N +++ + +DI LD+F
Sbjct: 948 AKLLIGFMD--DDQMIARYRKKLCALGVLESQLIFRKTTGLEN--YLRIHHEVDILLDSF 1003
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
PY G TTT +++MGVP +++AG+ A GV ++ GL+ IA ++++Y++ A+ S
Sbjct: 1004 PYTGGTTTSHAVWMGVPTLSIAGATTASRQGVEIMHIYGLQTFIATSQEDYIEKAIAWQS 1063
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
++ L R S+R M DG + + LE R W YC G
Sbjct: 1064 NLEELNGWRQSMRQNMPLKQ--DGFDVSAPLEKALRRAWQIYCAG 1106
>gi|271500092|ref|YP_003333117.1| methyltransferase regulatory domain-containing protein [Dickeya
dadantii Ech586]
gi|270343647|gb|ACZ76412.1| Methyltransferase regulatory domain, predicted [Dickeya dadantii
Ech586]
Length = 1150
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 160/555 (28%), Positives = 280/555 (50%), Gaps = 34/555 (6%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
FD A+ A P + +L V + ++ + + L + + L
Sbjct: 606 FDGALGVITRAIALMPFNWDFYVDLSVCFWKKNEWHHGMALTRKVLRCDKRKGLAWDTLA 665
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
V+ + +D+A +EKA+ +P +++G++ + G AI + + +++ P++
Sbjct: 666 VLLNITHNLDSAFICMEKALQIDPENPNFISHMGMVCHNLGRKD-AIKYHRKTIELMPEA 724
Query: 134 RNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRL---YSQYTSWDNTKDPERPLVIGY 190
+ N LL +++ + L++ H +G R Y Q+ S+ KD +RPL IG+
Sbjct: 725 FHLYSNLLLGLSHDVDVTPQALYQEHVLFGNRVEAAAANYHQHFSYIQNKDSQRPLRIGF 784
Query: 191 VSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYG 250
+S D+ H V+ F+E D + + YS+ + DAK E + + W ++
Sbjct: 785 ISGDFGDHPVTNFLEPIWNSLDRNLFSLYAYSSFQRNDAKA----ESLKQTAANWHNVDK 840
Query: 251 IDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRI 310
+ + ++A ++ +D+IDIL++L+GHTA N+L ++A +PAP+Q+TWIGYP TTG+ T+DY +
Sbjct: 841 MGDLELAMLINQDEIDILIDLSGHTAYNRLPVLALKPAPIQMTWIGYPGTTGMKTVDYIL 900
Query: 311 TD------SLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFN 364
D DP T E++I LP + P ++ V PAL NG++TF SFN
Sbjct: 901 LDVHYRQGGALDPYLT-----EKIIYLPSV-KYFEPVKDSPDVNELPALKNGYLTFASFN 954
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVK--CKPFCCDSVRHRFLS---TLEQLGLESLRV 419
KI+ + L +WA++L +PNSRL++ D R R L EQL +R
Sbjct: 955 RPQKISDETLALWAKVLTTIPNSRLIMGYMTGQETIDYFRTRLLECGVNEEQLSFR-MRT 1013
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
L +++ + +D+ LDT+PY G TT + +MGVP +T G A G
Sbjct: 1014 GL-------KEYLGMHREVDLLLDTYPYTGGTTVSHAAWMGVPVLTREGESIASRQGSVT 1066
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+ +GL I+ +EDE++Q AL + + L+++R +R ++ + + + ++ E
Sbjct: 1067 MRILGLDDFISTSEDEFLQKALYWSQSLEKLSDVRAGIRGRIA-ARMNSVLSPSVYFEHA 1125
Query: 540 YRNMWHRYCKGDVPS 554
RN W YC+G PS
Sbjct: 1126 IRNAWQIYCEGKEPS 1140
>gi|402834303|ref|ZP_10882906.1| glycosyltransferase family 41 domain protein [Selenomonas sp. CM52]
gi|402278599|gb|EJU27658.1| glycosyltransferase family 41 domain protein [Selenomonas sp. CM52]
Length = 487
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 257/500 (51%), Gaps = 29/500 (5%)
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY------NNLGVLYRDAGSIS 117
+FS+ L ++ +G+ +A E +E I + + E LG G I
Sbjct: 3 DFSKIAGELAILQD-KGRWEAGIERVEYLIRRHASELERGEKSFLCGRLGYFLHFVGRIE 61
Query: 118 LAIDAYEQCLKIDP---DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT 174
A AY++ + + P R + L+ +Y+ + D++L H + + F R +
Sbjct: 62 KAAAAYQEAVALAPYLAHQRKLYSDYLMVCHYLPQIGDEELAIRHFTYNQ-FFRSEEELH 120
Query: 175 SWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRF 234
+ + +GY+S ++ TH +S F+ L D+ ++V Y ADA +
Sbjct: 121 HERELHRRHKKIRVGYLSSNFKTHIMSCFMMQLLAIADHSRFEVYCYDLGNDADAAAKQM 180
Query: 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT-ANNKLGMMACQPAPVQVT 293
R G IWR I + K A + D+IDIL +L+GHT + L + + APVQ+T
Sbjct: 181 R----SFGNIWRSIVLSEAKDRARAIAADEIDILFDLSGHTDGGHGLATLGYKAAPVQLT 236
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHV-EELIRLPECFLCYTPSPEAGPVCPTPA 352
IGY +T+GL +DY ++D DP + E+L+RLP CYTP EA
Sbjct: 237 GIGYMSTSGLKAVDYYLSDIFLDPEGKGDAYFSEKLLRLPHSHFCYTPF-EAVFKSTIDW 295
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC-KPFCCDSVRHRFLSTLEQ 411
+ + FG FNN AKI+ +L++W +L VP+S+LV+K KP ++R R L+
Sbjct: 296 QPHERLVFGCFNNSAKISDDMLRLWYTLLMRVPDSKLVLKAWKP---KNLRKRALA---- 348
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
LG ++++ P+ L D++ Y MDI+LDTFPY G TTCE+LYMG P +T+AG+ H
Sbjct: 349 LGYRPDQIEVRPMTL---DYIHEYMDMDIALDTFPYTGGGTTCEALYMGTPVITLAGTRH 405
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
G+SLL VGL L A +EY++ A LASD L L +LR +M +SPV DG+
Sbjct: 406 GTRFGLSLLENVGLGELAAHTPEEYIEKAAALASDSELLTALHRNLRPMMQRSPVMDGRR 465
Query: 532 FALGLESTYRNMWHRYCKGD 551
+ +E+ Y +W + G+
Sbjct: 466 YVREVEAMYEKIWKEWLYGE 485
>gi|238927671|ref|ZP_04659431.1| possible TPR repeat-containing protein [Selenomonas flueggei ATCC
43531]
gi|238884387|gb|EEQ48025.1| possible TPR repeat-containing protein [Selenomonas flueggei ATCC
43531]
Length = 1077
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 264/527 (50%), Gaps = 25/527 (4%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AEA + L + + + A++ +Q P+ ++ ++ + G+ AA ++
Sbjct: 38 AEAASLLTALCIEERDAKGALKAWQECRVRAPHDPYTIFLRARIHLLMGERRAALRVLTP 97
Query: 92 AIAANPTYAEA----YNNLGVLYRDAGSISLAIDAYEQCLKIDPD----SRNAGQNRLLA 143
A P AE YN G R G+ A++ Y + PD + NA N L
Sbjct: 98 LFGA-PMSAEVAEKVYNLAGQCARFLGAAEKAVEFYARARDAAPDLTLRALNA-SNVLFN 155
Query: 144 MNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE-RPLVIGYVSPDYFTHSVSY 202
+Y+ ++ A ++G L++Q ++D+ + L IGY+SPD H V
Sbjct: 156 RHYLPAAPAEEK-RAAEEYGA----LFAQIRTFDHCAHRRGQRLRIGYLSPDVREHVVLS 210
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
F A + D + V Y+ + D + E+V + +R++ I ++ A +
Sbjct: 211 FSYALMTALDPARFTVTAYALGTEDD-----YTEQVKRSVQGFRNLSRITPEEAAYAIYR 265
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
D IDILV+L GHTA + L ++A +PAPVQ++ IGY +TGL T+DY + D + + +Q
Sbjct: 266 DGIDILVDLAGHTAGSTLPILAYRPAPVQISGIGYFASTGLRTVDYFLADPILAAGDAEQ 325
Query: 323 KHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILC 382
EEL+ LP C+ P A P I FGSFNN KI VL+VWA IL
Sbjct: 326 GFTEELLVLPATHFCWQPLQPAPAPAHAPTAGRS-IVFGSFNNFTKINDHVLRVWAEILR 384
Query: 383 AVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
VP SRL +K F + R L+ + G+ RVD + D++ AY+ MDI+L
Sbjct: 385 RVPESRLFLKAAVFSEEDARAEMLTRIAAAGISLSRVDTEGN---SPDYLAAYNRMDIAL 441
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
D FPY G TTC++LYMGVP VT++G G SLLT +G + LIA E+EY+ LA+
Sbjct: 442 DPFPYPGGGTTCDALYMGVPVVTLSGETLGSRFGASLLTNIGAEALIAHTEEEYIALAVS 501
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
LA D + L L LR ++++SPV D + + + Y +W Y +
Sbjct: 502 LAGDASMLDALHTGLRQMLAQSPVMDAAGYGAAVGAAYEEVWAAYGR 548
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 225/422 (53%), Gaps = 20/422 (4%)
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWD-NTK 180
AYE+ +P + + LLA N + + +LF AH +G L++ +D T
Sbjct: 662 AYEE----EPSDPSLYSSFLLAQN-AQDVDEKELFRAHCAYGD----LFAHVPQYDCRTP 712
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+ + +GY+SPD+ + + +F++ L +D + V VYS + D T R +
Sbjct: 713 YAHQKIRVGYISPDFRRNVLQHFVQPFLTMYDRTRFAVYVYSTAEQPDEVTAALRPHADQ 772
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
WR++ G +++A + D++DILV+L GH A L ++A +PAPVQ+ +GY T
Sbjct: 773 ----WREMGGRTAEEIAEQIHADEVDILVDLAGHAAGGALPVLARRPAPVQMMGLGYMAT 828
Query: 301 TGLPTIDYRITDSLADP--PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
+GL +DY +TD+L DP E ++ E+LIRLP F+ Y P E TPA G I
Sbjct: 829 SGLSAVDYFLTDALCDPLDGERERYFTEQLIRLPSQFV-YVPRAELPVPTGTPARQRGAI 887
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
FG FN K T ++L VW IL VP S+L++K + F ++R L +LG + R
Sbjct: 888 LFGVFNQYRKWTDEMLCVWREILERVPQSKLLLKSQVFFAAAMRRAAEERLARLGFDLDR 947
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ L P D+M+ Y +DI+LDT+P+ G TTC++LYMGVP VTM G+ + +
Sbjct: 948 ILLEPA---TTDYMERYLDVDIALDTYPWTGGGTTCDALYMGVPVVTMYGTRRSTRFSYA 1004
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
+L VG + L + Y+ A+ LA D+ L + +LR M SP+ D ++ LE
Sbjct: 1005 MLHLVGAEELAVASASAYISCAVSLAEDLDRLDGIHCTLRRKMETSPLMDQADYMRALEE 1064
Query: 539 TY 540
Y
Sbjct: 1065 AY 1066
>gi|427406429|ref|ZP_18896634.1| hypothetical protein HMPREF9161_00994 [Selenomonas sp. F0473]
gi|425708248|gb|EKU71288.1| hypothetical protein HMPREF9161_00994 [Selenomonas sp. F0473]
Length = 559
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 196/367 (53%), Gaps = 9/367 (2%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
ER L IGY+SPD H V F A D ++ VY A+ + DA F E V +
Sbjct: 195 ERRLRIGYLSPDVREHVVLSFSYALFTALDTARFETYVY-AMNEEDA----FTESVRCRV 249
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+R++ G + A ++ ED+IDILV+L GHTA L ++A +PAPVQ++ IGY +TG
Sbjct: 250 EGFRNLTGCGAAEAARLIYEDRIDILVDLAGHTAGGTLPILAYRPAPVQMSGIGYFASTG 309
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
L +DY + D + ++ VE L+ LP C+ P P PA I FGS
Sbjct: 310 LKAVDYFLADPVLAAEPAQEGFVERLLVLPRTHFCWQPLRPPPPTGHAPAAGRP-IVFGS 368
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
NN K+ VL+VWA+IL VP SRL++K + F + G+ + RV+
Sbjct: 369 LNNFTKVNDTVLRVWAKILHRVPTSRLLLKAEIFSVADGAAEAWRRIAAAGIPAERVETE 428
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ D++ AY +DI+LDTFPY G TTCE+LYMGVP VT+AG G SLL
Sbjct: 429 GA---SADYLTAYRRIDIALDTFPYPGGGTTCEALYMGVPVVTLAGETLGSRFGASLLQN 485
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+G + LIA+ +EY++ A+ LA D L L LR++ + SPV D + + + Y
Sbjct: 486 IGAQALIARTTEEYIERAVLLAQDARTLDALHAGLRNMTAASPVMDTTAYGAAVGTAYET 545
Query: 543 MWHRYCK 549
+W Y
Sbjct: 546 VWAAYAS 552
>gi|420246618|ref|ZP_14750054.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderia sp. BT03]
gi|398073903|gb|EJL65062.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderia sp. BT03]
Length = 606
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 247/500 (49%), Gaps = 12/500 (2%)
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
EC+++ ++P+ + + ++LG + + A + + KA+ P A AY++L
Sbjct: 103 ECFRLTTQMQPDHADAYHSLGNALRMLKQYVEAVQSLCKALDLKPDNARAYDDLAGTLLA 162
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ 172
+S A++A++ DPD A +RL AM + + + +G + +
Sbjct: 163 LNELSAALEAWQLASSADPDYLAARSSRLSAMACVANITPQRYLDEALAFGAQASKNVMP 222
Query: 173 YTSWDNTKDPE--RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
+ SW ++P RPL +G V D + YF+E L + D V Y
Sbjct: 223 FKSWLVGREPRTARPLRVGLVLGDLRQPTAGYFLEGVLKHADQARIAFVGYVTRGGNSEC 282
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
R + + ++ W+ I G+ + +A +R D+ID+L++ GH +N+L + A +PAP+
Sbjct: 283 AERIKPQFVE----WKSIGGMRDLSLAQEIRRDRIDVLIDAAGHAPHNRLPLFAWKPAPI 338
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT 350
QV+W TG+ +I Y + D+ P +VE+ RLP+ +L +TP AG V
Sbjct: 339 QVSWPNSVAGTGVESICYLLGDAHVTPESEHAHYVEKAWRLPDSYLHFTPPHTAGDVNAL 398
Query: 351 PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLE 410
P L G IT+G F+ L K+T V+ VWA IL P++RL++K + D VR T E
Sbjct: 399 PILHAGHITYGYFDRLEKVTDGVVAVWAAILAQTPSARLLMKSEQLEIDDVR---AVTRE 455
Query: 411 QLGLESLRVDLLPL--ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
+ + + L L ++ AYS +D++L FPY+ T E+L+MGVP + M G
Sbjct: 456 RFAAHGIGENQLVLEGAASPNERFDAYSRVDVALSPFPYSSRTVAVEALWMGVPMLCMKG 515
Query: 469 SVHAHNVGVSLLTKVGLKH-LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
A ++ S++ GL + IA + YV A++ A+DV L+ LR LRD + +P+C
Sbjct: 516 DRFAAHICESIVHAAGLGNTWIADDASAYVCRAVEAAADVETLSTLRTELRDRLRATPLC 575
Query: 528 DGQNFALGLESTYRNMWHRY 547
D FA MW Y
Sbjct: 576 DAPRFAHNFTDALHAMWDEY 595
>gi|425442300|ref|ZP_18822552.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9717]
gi|389716770|emb|CCH99039.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9717]
Length = 1039
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 279/598 (46%), Gaps = 49/598 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ D AI+ + A N + A A NNLG++ + +D L AV +Q A+
Sbjct: 447 NLGIIAVSKGDLDEAIICFNQAIRSNQNYAFAENNLGLVLQMQDKLGDAVVNFQEAIRKN 506
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN+ ++ NLG V +QGK++ A + AI NP Y +AYN+L + + A+
Sbjct: 507 PNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIKLNPKYIKAYNSLALALGRQDKVEAAMSV 566
Query: 123 YEQCLKIDPDS-------------------RNAGQNRL--LAMNYINEGHDDKL--FEA- 158
++Q L I P+S R A +L L N + EG + F++
Sbjct: 567 FKQALAIQPNSPEAFACLFSMKEMTCNWETREADLIQLWQLTENQLQEGKSTAVTPFDSL 626
Query: 159 HRDWG---------------KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ W KR + L ++ ++++++ L IGY+ D+ H S+
Sbjct: 627 YKPWSASQQLKVACNYAQEIKRQLALGTKPLNFNHSRTRSGRLKIGYLCHDFRNHPTSHL 686
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
+++ HD N++++ YS ++ +R ++ + DI + + A + +D
Sbjct: 687 MQSVFGLHDRNNFEIIAYSYGPDDGSE---YRRRIANDCDRFYDIATLSITESAQRIFDD 743
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
+ ILV+L G+ + ++A +PAP+QV ++ YP T G IDY I D++ PPE
Sbjct: 744 GVHILVDLMGYIDKARTQILALKPAPIQVNYLVYPGTMGADFIDYIIGDAIVTPPEFPDN 803
Query: 324 HVEELIRLPECFLC--YTPSPEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARI 380
E+L+ LP+ + Y + PV + L F FN+ KI P++ VW I
Sbjct: 804 FTEKLVILPDSYQANDYQQIISSKPVTRSHYGLPESGFVFCCFNHTYKIEPQIFTVWMEI 863
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L VP S L + + ++ R + G++ R+ + + +H+ + L D+
Sbjct: 864 LANVPGSVLWLFSRVAEAEANLRR---EAQARGIDGDRL-IFAHLQPKSEHLARHQLADL 919
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LDT Y TT ++L+ G+P +T G+ VG SLLT +GL LI KN +EY LA
Sbjct: 920 FLDTLYYNAHTTGSDALWAGLPIITCPGATFPSRVGASLLTAMGLPELITKNLEEYKNLA 979
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
+ LA L ++ L P+ D F LE YR MW Y G P + R+
Sbjct: 980 INLAKSPDKLHEIKQKLAQNRLTYPLFDTLRFTRNLEKAYRTMWDIYAAGKSPEMIRI 1037
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y + LK + AI Y+ + +P A A + LGVI +D+A+ Y+ AL
Sbjct: 377 LYQQAYTLQKQLKLEEAIALYQQLINQHPQYAAAWHQLGVIMDSLGQIDQAILAYKQALL 436
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I PN+++S NNLG++ +G +D A +AI +N YA A NNLG++ + + A+
Sbjct: 437 INPNYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNYAFAENNLGLVLQMQDKLGDAV 496
Query: 121 DAYEQCLKIDPD 132
+++ ++ +P+
Sbjct: 497 VNFQEAIRKNPN 508
>gi|227112547|ref|ZP_03826203.1| hypothetical protein PcarbP_06262 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 1087
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 241/498 (48%), Gaps = 21/498 (4%)
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N + + N + +VY M A IEKAI P A N + ++ + AI+ Y
Sbjct: 596 NVAVAWNVVALVYLKFENMAGAEVCIEKAIKLLPNDAAVLNAMAMVLDKKSDVESAIEYY 655
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQY--TSWDNTKD 181
+ + P+ + N L A+ + + ++F H +G+ + + KD
Sbjct: 656 RKAVANAPEDLSLYSNLLFALLHNAKIPASEIFAEHLLYGEVVEKRNGALAPVHYLQNKD 715
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P+R L +G+VS D ++H VS F+ D+Q++ + YS D T R EK
Sbjct: 716 PDRVLRVGFVSGDLYSHPVSKFLSPVWNDIDHQHFSLYAYSTSHHYDDVT-RMLEK---S 771
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
WR++ + ++ +++ D+IDIL +L+GHT +N+L M A +PAP+Q++WIGYP TT
Sbjct: 772 SAAWRNVASSSDTELFELIKRDEIDILFDLSGHTGDNRLSMFAMKPAPIQISWIGYPGTT 831
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
GL +DY + + A PE E + + P V PALTNG++TF
Sbjct: 832 GLKAMDYYLVMNHAPYPEVLAHQFTEKLLYVLFDRQFEPVVNGPEVNDLPALTNGYLTFA 891
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE------ 415
SFN KI VL W +IL +P S++++ P R LE G++
Sbjct: 892 SFNRPTKINDTVLSAWGKILVQLPTSKMIIGALPSM--QTREHIRKKLEAQGVQPEQLIF 949
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
RV+++ + ++ + +D+ LDTFPY G TTT +L+MGVP +T+AG +A
Sbjct: 950 RERVNIMNYLAMHQE-------IDVLLDTFPYTGGTTTNYALWMGVPTLTLAGETYAARQ 1002
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
GV L + GL IA +E +Y+ A+ + + L +R SLR M +
Sbjct: 1003 GVVNLGQAGLNEFIADSEADYIDKAISWNNRLDELNQIRHSLRKKMEHDIDTADVTSSTY 1062
Query: 536 LESTYRNMWHRYCKGDVP 553
+ R +W YC G+ P
Sbjct: 1063 FQQALRTVWKAYCAGEPP 1080
>gi|422343491|ref|ZP_16424419.1| hypothetical protein HMPREF9432_00479 [Selenomonas noxia F0398]
gi|355378798|gb|EHG25978.1| hypothetical protein HMPREF9432_00479 [Selenomonas noxia F0398]
Length = 497
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 218/410 (53%), Gaps = 13/410 (3%)
Query: 139 NRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTH 198
N L+ ++Y + D++L +AH + + + + K L IGY+SP+ H
Sbjct: 95 NYLMYLHYADGISDEELRDAHASYAA----MIGSVPRFPHEKRRREKLRIGYLSPNITDH 150
Query: 199 SVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
V F +D ++V +Y A + ++ R+ M G + D+ + +K A
Sbjct: 151 IVLNFAVQLFSAYDRARFEVRLYDAGGQR-SEVTRWAAD-MADG--YADLSALSPQKAAE 206
Query: 259 MVREDKIDILVELTGHTANNK-LGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
+ D DIL +L GH+A K L + A +PAPVQ+ IGY NTTGL +DY + D + DP
Sbjct: 207 RIHADGTDILFDLAGHSAGGKTLQIAAYKPAPVQICGIGYFNTTGLTAMDYFLGDPICDP 266
Query: 318 PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
PET E ++RLP LC+TPS + + F SFNN AKIT ++LQ+W
Sbjct: 267 PETDALFTERILRLPRTHLCFTPSERFRTYENLRRVPHDSPVFASFNNFAKITDEMLQIW 326
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
IL AVP +RL++K +++ HR EQ G++ +R++L P + D+++ Y
Sbjct: 327 GGILRAVPGARLLLKNVHPQRETL-HRMQRRAEQAGIDPVRLELRPG---SKDYLRDYLD 382
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
DI LDT+PY G TTCE+L MG+P VT+AG+ H GVSLL GL L A + Y
Sbjct: 383 ADIILDTYPYQGGGTTCEALCMGLPVVTLAGTRHGARFGVSLLQNAGLGELAADSVQAYA 442
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
+ A+ LA D L L S+ +M SP+ DG + +E+ Y +W RY
Sbjct: 443 ERAVLLAQDRELLTALHASVPRMMRASPLMDGAGYVRSVEAAYETIWERY 492
>gi|313896868|ref|ZP_07830415.1| TPR/SEC-C domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974315|gb|EFR39783.1| TPR/SEC-C domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 497
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 216/413 (52%), Gaps = 15/413 (3%)
Query: 138 QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFT 197
N L+ ++Y + D L E H WG R++ + + K + IGY+SP
Sbjct: 94 SNYLMTLHYAADVSDAFLREEHGAWG----RIFGDVPQFSHEKRRRAKIRIGYLSPSLSE 149
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
H V F +D + V +YSA D T + + +R++ G+ E A
Sbjct: 150 HVVLNFAVPLFSGYDRTGFDVRIYSAGGADDDVT----DWIAGMVDGYRNLAGMPETAAA 205
Query: 258 AMVREDKIDILVELTGHTANNK-LGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLAD 316
A + D+IDIL +L GHTA + L + A +PAPVQ+T IGY +TTG+P IDY + D + D
Sbjct: 206 AAIHADEIDILFDLAGHTAGGRTLRIAAYKPAPVQITGIGYFDTTGVPAIDYVLGDPVCD 265
Query: 317 PPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQV 376
PP ++ E+++RLP LC+TP P + + FGSFNN +KIT L++
Sbjct: 266 PPGMEELFFEKILRLPHTHLCFTPPERFAPYENIVRRPHMPVVFGSFNNFSKITDDTLRL 325
Query: 377 WARILCAVPNSRLVVKCKPFCCDSVRHRFL-STLEQLGLESLRVDLLPLILLNHDHMQAY 435
WA IL AVP +RLV+K D+ + + + ++ R+D+ D+++ Y
Sbjct: 326 WAEILHAVPEARLVLKN--VNADAAAPELMRARAARADIDLRRIDVRSG---TRDYLRDY 380
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+DI LDT+PY G TTCE+L MG+P VT AG+ H G S+L GL L+A D
Sbjct: 381 LDVDIILDTYPYQGGGTTCEALLMGLPVVTRAGTRHGARFGTSILYNAGLGELVADTADA 440
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
YV+ A LA D LA L +++ +M SP+ DG + +E+ Y +W Y
Sbjct: 441 YVERAALLARDGELLAALHGAVQRMMRASPLMDGAQYVRDMEAAYETIWENYL 493
>gi|304438234|ref|ZP_07398176.1| TPR domain/SEC-C domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368841|gb|EFM22524.1| TPR domain/SEC-C domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 1077
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 229/434 (52%), Gaps = 24/434 (5%)
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK-LFEAHRDWGKRFMRL--YSQYTSWDN 178
AYE+ +P + + LLA N E D+K LF AH + + F R+ Y T + +
Sbjct: 662 AYEE----EPSDPSLYSSFLLAQN--AEDVDEKELFRAHCAYAELFARVPQYDCRTPYAH 715
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
K + +GY+SPD+ + + +F++ L +D + V VYS + D T R
Sbjct: 716 QK-----IRVGYISPDFRRNVLQHFVQPFLTMYDRTRFAVYVYSTAEQPDEVTAALRPHA 770
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ WR++ G +++A + D++DILV+L GH A L ++A +PAPVQ+ +GY
Sbjct: 771 DQ----WREMGGRTAEEIAEQIHADEVDILVDLAGHAAGGALPVLARRPAPVQMMGLGYM 826
Query: 299 NTTGLPTIDYRITDSLADP--PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG 356
T+GL +DY +TD+L DP E ++ E+LIRLP F+ Y P E TPA G
Sbjct: 827 ATSGLSAVDYFLTDALCDPLDGERERYFTEKLIRLPSQFV-YVPRAELPAPTGTPARQRG 885
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I FG FN K T ++L VW IL VP S+L++K + F ++R L +LG +
Sbjct: 886 AILFGVFNQYRKWTDEMLCVWREILERVPQSKLLLKSQVFFAAAMRREAEERLARLGFDL 945
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ L P D+M+ Y +DI+LDT+P+ G TTC++LYMGVP VTM G+ +
Sbjct: 946 DRILLEPA---TTDYMERYLDVDIALDTYPWPGGGTTCDALYMGVPVVTMYGTRRSTRFS 1002
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
++L VG + L + Y+ A+ LA D L + +LR M SP+ D + + L
Sbjct: 1003 YAMLHLVGAEELAVTSASAYISCAVSLAEDPDRLDGIHCTLRRKMETSPLMDQRGYMRAL 1062
Query: 537 ESTYRNMWHRYCKG 550
E Y W +G
Sbjct: 1063 EEAYIMAWRNAGQG 1076
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 262/527 (49%), Gaps = 29/527 (5%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
AEA + L + + + A++ +Q ++ P ++ ++ + G+ AA ++
Sbjct: 38 AEAASLLTALCIEERDAKGALKAWQECRALLPKEPYTVFLRARIHLLMGERRAALRVLTP 97
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN-RLLAMNYINEG 150
A P AE + Y AG + + A E+ ++ +R+A N L A+N N
Sbjct: 98 LFEA-PMSAEVAEKV---YNLAGQCARFLGAAEKAVEFYARARDAAPNLTLRALNASN-- 151
Query: 151 HDDKLFEAH---------RDWGKRFMRLYSQYTSWDNTKDPE-RPLVIGYVSPDYFTHSV 200
LF H + + + L++Q ++D+ + L IGY+SPD H V
Sbjct: 152 ---VLFNRHYIPAAPAEEKRAAEEYGGLFAQIRTFDHCAHRRGQRLRIGYLSPDVREHVV 208
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
F A + D + V Y+ + D + E+V + +R++ + ++ A +
Sbjct: 209 LSFSYALMTALDPARFTVTAYALGTEDD-----YTEQVKRSVQGFRNLSHVTPEEAAYAI 263
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
D IDILV+L GHTA + L ++A +PAPVQ++ IGY +TGL +DY + D + +
Sbjct: 264 YRDGIDILVDLAGHTAGSTLPILAYRPAPVQISGIGYFASTGLRAVDYFLADPVLAAGDA 323
Query: 321 KQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARI 380
+Q EEL+ LP C+ P A PA G I FGSFNN K+ +VL+VWA I
Sbjct: 324 EQGFTEELLVLPATHFCWQPLRPAPAAVHPPAAGRG-IVFGSFNNFTKVNDRVLRVWAEI 382
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L VP SRL +K F D L + G+ + VD + D++ AY+ MDI
Sbjct: 383 LRRVPESRLFLKADIFSEDDAHAEVLERIAAAGIPTSCVDTEGN---SPDYLAAYNRMDI 439
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
+LD FPY G TTC++LYMGVP VT++G G SLLT +G + LIA E+EY+ LA
Sbjct: 440 ALDPFPYPGGGTTCDALYMGVPVVTLSGETLGSRFGASLLTNIGAEALIAHTEEEYISLA 499
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
+ LA D L L LR ++ +SPV D + + + Y +W Y
Sbjct: 500 VSLAGDTQTLDALHTGLRGMLVRSPVMDAAGYGAAVGAAYEQVWSIY 546
>gi|189426417|ref|YP_001953594.1| hypothetical protein Glov_3368 [Geobacter lovleyi SZ]
gi|189422676|gb|ACD97074.1| Tetratricopeptide domain protein [Geobacter lovleyi SZ]
Length = 596
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 248/551 (45%), Gaps = 44/551 (7%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
PH NN +++ +A Y+ P ++ + + AA
Sbjct: 49 PHEYTLQNNCAWLFEKLGRYAEAETAYRGLFEEMPGYANGALGYARMLEQGKRYVAAVTA 108
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+ +++AA+P + LG AG A+ Y +++D +R N L + +
Sbjct: 109 LRRSVAADPVNPGLLSGLGNALVMAGEAEAALLWYGLSVELDRHARATVSNLLYTLLMVR 168
Query: 149 E------GHDDKLFEAHRDWGKRFMRLYSQYTSWDNT----------------KDPERPL 186
+ + A R R+ Q S P PL
Sbjct: 169 TIAPQVVARELDMCAAVPGLAVRISRVAKQLHSLSGEFIAGMHRRFEETCRIETAPAPPL 228
Query: 187 V--------IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
IGY+S D + H V YF+E + HD +++VV+S + D T +
Sbjct: 229 SPGTRKRIRIGYLSADLYAHPVGYFLEGVIPAHDRNRFEIVVFSPYTERDELTAALKRSA 288
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
W ++G D ++ +R ++DI V++ GHT N L + A + AP+Q+TW GYP
Sbjct: 289 EH----WVVLHGTDRLEIVRQIRAWQLDIAVDMAGHTGGNYLDLFARRLAPLQITWGGYP 344
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
+TGL +D+ + D +A PPE + + E + LP ++ + P +A V PALT G I
Sbjct: 345 GSTGLEAMDHILADQVALPPEDRPYYTERPLYLPHGYVSFRPPADAPLVGSLPALTTGCI 404
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFGSFN + K+ L +W +L A+P SRL +K K F VR + L G+ S R
Sbjct: 405 TFGSFNTVQKLNSSTLALWGAVLRALPGSRLFLKSKGFDDPLVRSAYWEKLAAEGVSSDR 464
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS-----VHAH 473
+ LL + + AY +DI+LD PY G T E+L+MGVP + + G HA
Sbjct: 465 I-LLEGYAPRRELLAAYHQVDIALDPVPYQGGVTVLEALWMGVPTLVLRGKRPPFVRHAE 523
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
S LT+ G+ I +ED YV AL S++ L+ LR LR M+ SP+CD F
Sbjct: 524 ----SHLTQAGVADWIVASEDAYVATALAWGSNLAGLSTLRSRLRQQMAASPICDTVAFT 579
Query: 534 LGLESTYRNMW 544
LE+ + +W
Sbjct: 580 RDLEAAFTQVW 590
>gi|365850015|ref|ZP_09390483.1| tetratricopeptide repeat protein [Yokenella regensburgei ATCC 43003]
gi|364568340|gb|EHM45985.1| tetratricopeptide repeat protein [Yokenella regensburgei ATCC 43003]
Length = 1097
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 266/537 (49%), Gaps = 41/537 (7%)
Query: 35 CNNLGVIYK---------DRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA 85
C++L + Y DR + K + S F SL L + +QG+ A
Sbjct: 562 CSSLDIYYDLATALQKTGDRHHAQKIIHGLLRLDSKSAGFWHSLATL---HQMQGQAQLA 618
Query: 86 AEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145
+ +A P A LGV+ D + A E+ L++ P+ + + L +
Sbjct: 619 EKCSREAFRHQPNNARYLGTLGVILSDNQKLDEARYFLEKALELKPNDFDCFTSLLFVLT 678
Query: 146 YINEGHDDKLFEAHRDWGKRF-----MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSV 200
+ + + E H+++G+R + Y D K+P R L IG+VS D H V
Sbjct: 679 HDHTVTAQQQLEMHKEYGRRVDAWAAGEMLEHYAPVD--KNPTRKLRIGFVSGDLRNHPV 736
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
S F+ + +++++V Y+A D T R + + +WR++ + + ++A +
Sbjct: 737 SNFLLPFWDSFNREHFELVGYNASPTHDWMTDRLQAGAV----LWRNVELMSDVELAKQI 792
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD-SLADPPE 319
D IDIL++L+GHT ++ A +PAPVQ+TWIGYP T+G+ +DYR+ +PP
Sbjct: 793 NADAIDILIDLSGHTTYTRIPAFALRPAPVQMTWIGYPGTSGIAAMDYRLLSMGCLNPPG 852
Query: 320 TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
+++ +E++I +P L ++P + + PAL+ G+ITFGSFN KI P+VL++WA
Sbjct: 853 LEKQFLEKVIYVPMDKL-FSPEKNSPEISELPALSKGYITFGSFNRPKKINPEVLRLWAS 911
Query: 380 ILCAVPNSRLVVKCKPFCCDS-VRHRFLSTLEQLGLESLRVDL---LPLILLNHDHMQAY 435
IL P SRL + F D +R + L +LG+ R+ +PL+ +++ ++
Sbjct: 912 ILTQYPQSRLHIG---FMDDERIRRQITRQLVELGVAEERLSFQGRMPLL----EYLASH 964
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+DI LDTFPY G TTT + +MGVP +T+ G A GV + GL IA ++ +
Sbjct: 965 DRVDILLDTFPYTGGTTTNHAAWMGVPTLTLCGETLACRQGVENMNSYGLHQFIAMDKAD 1024
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG--LESTYRNMWHRYCKG 550
+V AL L +R +R+ + PV F+ LE R+ W YCKG
Sbjct: 1025 FVSKALYWRDHFDELNTIRRGMRN---QIPVETENGFSAAGHLEYALRHAWALYCKG 1078
>gi|425453499|ref|ZP_18833256.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9807]
gi|389802856|emb|CCI18142.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9807]
Length = 1039
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 173/633 (27%), Positives = 286/633 (45%), Gaps = 83/633 (13%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LGV + + D AI+ Y+ A NP+ AE+ NNLG+I + +LD+A+ C+ A+
Sbjct: 412 HQLGVIMDSLGQIDQAILAYKQALLINPNYAESHNNLGIIAVSKGDLDEAIICFNQAIRS 471
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS------ 115
N++ + NNLG+V +Q K+ A ++AI NP Y EA+ NLG + + G
Sbjct: 472 NQNYAFADNNLGLVLQMQDKLGDAGVKFQEAIRKNPNYPEAHFNLGNVLQLQGKTEEAIA 531
Query: 116 ----------------------------ISLAIDAYEQCLKIDPDS-------------- 133
I A+ ++Q L I P+S
Sbjct: 532 YFQTAIKLNPKYIKAYNSLALALGRQEKIEEAMSVFKQALAIQPNSPEAFACLFSMKEMT 591
Query: 134 -----RNAGQNRL--LAMNYINEGHDDKL--FEA-HRDWG---------------KRFMR 168
R A +L L N + EG + F++ ++ W KR +
Sbjct: 592 CNWETREADLIQLWQLTENQLQEGKTTAVTPFDSLYKPWSATQQLQVASNYAQEVKRQLA 651
Query: 169 LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
L ++ ++++++ L IGY+ D+ H S+ +++ HD N++++ YS
Sbjct: 652 LITKPLNFNHSRTRSGRLKIGYLCHDFRNHPTSHLMQSVFGLHDRNNFEIIAYSYGPDDG 711
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
++ +R ++ + DI + + A + D + ILV+L G+ + ++A +PA
Sbjct: 712 SE---YRRRIANDCDRFYDIATLSITESAQRIFNDGVHILVDLMGYIDKARTQILALKPA 768
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC--YTPSPEAGP 346
P+QV ++ YP T G IDY I D++ PPE+ E+L+ LP+ + Y + P
Sbjct: 769 PIQVNYLVYPGTMGADFIDYIIGDAIVTPPESADNFTEKLVILPDSYQANDYQQIISSKP 828
Query: 347 VCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRF 405
V + L F FN+ KI P++ VW IL VP S L + + ++ R
Sbjct: 829 VTRSQYGLPKSGFVFCCFNHTYKIEPQIFTVWMEILANVPGSVLWLFSRVAEAEANLRR- 887
Query: 406 LSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVT 465
+ G+E R+ + + +H+ + L D+ +DT Y TT ++L+ G+P +T
Sbjct: 888 --EAKARGIEGDRL-IFAHLEPKSEHLARHQLADLFIDTLYYNAHTTGSDALWAGLPIIT 944
Query: 466 MAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
G VG SLLT +GL LI KN +EY LA+ LA L ++ L P
Sbjct: 945 CLGETFPSRVGGSLLTAIGLPELITKNLEEYKNLAINLAKSPDKLHEIKQKLAQNRLTYP 1004
Query: 526 VCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
+ D F LE YR MW Y G P + R+
Sbjct: 1005 LFDTLRFTQNLEKAYRTMWDIYAAGKSPEMIRI 1037
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y + + LK + AI Y+ + +P A A + LGVI +D+A+ Y+ AL
Sbjct: 377 LYKQAYSLQKQLKLEDAIALYQQLINQSPQYAAAWHQLGVIMDSLGQIDQAILAYKQALL 436
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I PN+++S NNLG++ +G +D A +AI +N YA A NNLG++ + + A
Sbjct: 437 INPNYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNYAFADNNLGLVLQMQDKLGDAG 496
Query: 121 DAYEQCLKIDPD 132
+++ ++ +P+
Sbjct: 497 VKFQEAIRKNPN 508
>gi|374575450|ref|ZP_09648546.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
gi|374423771|gb|EHR03304.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
Length = 746
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/514 (28%), Positives = 256/514 (49%), Gaps = 15/514 (2%)
Query: 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98
G + D L++A+ + AL++ P +L V ++G A ++ + NP
Sbjct: 234 GRLNLDLSRLEQALADFDAALALSPRLEVALQGKAQVNILKGNTAGAIAAVKTLLEENPR 293
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA 158
L Y G I+ A++ + L I PD + ++ ++Y+ E A
Sbjct: 294 SDIGIALLASCYASQGDIATALEHLDAGLAIAPDYADLIGRKIFFLDYLPEADFAVQQAA 353
Query: 159 HRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKV 218
+ W Q N DP++ ++IGYV+ ++ HS ++ + L +HD+ +++
Sbjct: 354 RKQWWDAIGAKLPQRALSPNKLDPDKRILIGYVASEFRNHSAAFTLLPVLRHHDHARFEI 413
Query: 219 VVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANN 278
V YS D T F+ +W D + + + ++A ++ DK+DIL++++GHT N
Sbjct: 414 VCYSCSPGRDEMTDEFK----SMADVWVDAWQLSDDELADRIQADKVDILIDVSGHTTGN 469
Query: 279 KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY 338
+L + A +PAP+QV+ G+ TGL T+DY + D + P + E++ LP C +
Sbjct: 470 RLHVFARKPAPIQVSGFGHATGTGLQTMDYVLADPVFIPQSARHLLAEKVYDLP-CLITI 528
Query: 339 TPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC----K 394
P + P P L NG +TFG FN + KI+ + ++VW++++ V S++V+K
Sbjct: 529 DPILDL-PASEPPMLRNGHVTFGVFNRIYKISDEAIRVWSKVMREVTGSKIVIKHTLLDD 587
Query: 395 PFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTC 454
P D++ RF++ G+ V L H+H+ A++ +DISLDTFP G +T
Sbjct: 588 PMLRDNLVARFVAN----GVAEENVTCLGSTP-RHEHLLAFANIDISLDTFPQNGGVSTW 642
Query: 455 ESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLR 514
ESLY GVP V G+ + G S++ VGL +A +++ Y +A + A+ LA LR
Sbjct: 643 ESLYAGVPVVAKLGNGASSRAGGSIVAAVGLDDWVAADDEGYAAIACKYAAQPAHLAQLR 702
Query: 515 MSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
L ++ SP + + + +E+ YR W YC
Sbjct: 703 AELPARIATSPAGNVETYTREVEAGYRQFWRDYC 736
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+ + + + A E A +P +A NLG +Y + A C + A+++KP
Sbjct: 63 LGLRAYDGGRLEEAQQLLECATALDPRSPDAHGNLGAVYFNLQKFQDARACQEKAIALKP 122
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N +L NLG G + A E+ E+AI P YA+A+ N G+ G A +++
Sbjct: 123 NSPIALTNLGNTLLHMGLAEQAIELHERAIRLKPDYADAFCNRGMAELIEGQFQRAKESF 182
Query: 124 EQCLKIDPDSRNAGQNR 140
++ L P A R
Sbjct: 183 DRALAFQPRHAEAIAGR 199
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y + KF A E A P+ A NLG ++A+E ++ A+ +K
Sbjct: 96 NLGAVYFNLQKFQDARACQEKAIALKPNSPIALTNLGNTLLHMGLAEQAIELHERAIRLK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
P+++ + N G+ ++G+ A E ++A+A P +AEA G++
Sbjct: 156 PDYADAFCNRGMAELIEGQFQRAKESFDRALAFQPRHAEAIAGRGMV 202
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV 78
+ E+ HF+ A + LG+ D L++A + + A ++ P + NLG VY
Sbjct: 49 ILTEVPDHFD-----AAHLLGLRAYDGGRLEEAQQLLECATALDPRSPDAHGNLGAVYFN 103
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
K A EKAIA P A NLG G AI+ +E+ +++ PD +A
Sbjct: 104 LQKFQDARACQEKAIALKPNSPIALTNLGNTLLHMGLAEQAIELHERAIRLKPDYADAFC 163
Query: 139 NRLLA 143
NR +A
Sbjct: 164 NRGMA 168
>gi|403059113|ref|YP_006647330.1| hypothetical protein PCC21_026740 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402806439|gb|AFR04077.1| hypothetical protein PCC21_026740 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 1139
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 240/498 (48%), Gaps = 21/498 (4%)
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N + + N + +VY M A IEKAI P A N + ++ + AI+ Y
Sbjct: 648 NVAVAWNVVALVYLKFENMAGAEVCIEKAIKLLPNDAAVLNAMAMVLDKKSDVESAIEYY 707
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT--SWDNTKD 181
+ + P+ + N L A+ + + ++F H +G+ + + KD
Sbjct: 708 RKAVTNAPEDLSLYSNLLFALLHNAKIPASEIFAEHLLYGEVVEKRNGALAPVHYLQNKD 767
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P R L +G+VS D ++H VS F+ D+Q++ + YS D T R EK
Sbjct: 768 PNRVLRVGFVSGDLYSHPVSKFLSPVWNDIDHQHFSLYAYSTSHHYDDVT-RMLEK---S 823
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
WR++ + ++ +++ D+IDIL +L+GHT +N+L M A +PAP+Q++WIGYP TT
Sbjct: 824 STAWRNVASSSDTELFELIKRDEIDILFDLSGHTGDNRLSMFAMKPAPIQISWIGYPGTT 883
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG 361
GL +DY + + A PE E + + P V PALTNG++TF
Sbjct: 884 GLKAMDYYLVMNHAPYPEVLAHQFTEKLLYVLFDRQFEPVVNGPEVNDLPALTNGYLTFA 943
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE------ 415
SFN KI VL W +IL +P S++++ P R LE G++
Sbjct: 944 SFNRPTKINDTVLSAWGKILVQLPTSKMIIGALPSM--QTREHIRKKLEAQGVQPEQLIF 1001
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
RV+++ + ++ + +D+ LDTFPY G TTT +L+MGVP +T+AG +A
Sbjct: 1002 RERVNIMNYLAMHQE-------IDVLLDTFPYTGGTTTNYALWMGVPTLTLAGETYAARQ 1054
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
GV L + GL IA +E +Y+ A+ + + L +R SLR M +
Sbjct: 1055 GVVNLGQAGLNEFIADSEADYIDKAISWNNRLDELNQIRHSLRKKMEHDIDTADVTSSTY 1114
Query: 536 LESTYRNMWHRYCKGDVP 553
+ R +W YC G+ P
Sbjct: 1115 FQQALRTVWKAYCAGEPP 1132
>gi|456353303|dbj|BAM87748.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Agromonas oligotrophica S58]
Length = 740
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 265/551 (48%), Gaps = 17/551 (3%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A+ E+ F++A + A P AE + G +Y +A + A+++
Sbjct: 197 NKGLAHLELHHFELAEATFNAALAARPAHAELRAHRGRLYMLSGRTAEAEADFDAAVTLD 256
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + ++G + A ++ + NPT A LG G I AI
Sbjct: 257 PRLQVGWQGKAQICMIKGNVAQAMAACKRVLDQNPTAQVALTLLGACLGRLGDIEGAIAR 316
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW-----GKRFMRLYSQYTSWD 177
++Q L + PD A ++ +++++ G D + +A R + G +F R S D
Sbjct: 317 FDQALTVQPDYDEAITKKIFYLDFLS-GADFAVQQAARHYWWVAVGSKFPRRKLSPRSLD 375
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
P+R LV+GYVS D+ THS ++ L HD +V YS + D T +F+
Sbjct: 376 ----PDRRLVVGYVSADFRTHSAAFAFLPVLRGHDKAQVQVNCYSTSPRHDDFTTKFQSA 431
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
+W + + + ++A ++ D +DILV+L+G+T ++ + A +PAP+QVT G
Sbjct: 432 ----ADVWVEASNLSDDELADRIQADGVDILVDLSGYTTGMRMPVFARKPAPIQVTAWGS 487
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
TGL T+DY D + P + E + LP + P + P P P L NG
Sbjct: 488 GTGTGLATMDYFFADPVTVPESVRPLFAEHVHDLPSV-ITIDPLLDIPP-SPPPMLQNGH 545
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+TFG +N + KI+ + + +WAR+L VP+++LV+K VR + G+
Sbjct: 546 VTFGVYNRIDKISDEAIALWARLLGEVPDAQLVIKHLALNDALVRDGLIGRFVTQGVPDA 605
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ L +H+++Y +DI+LD FP G +T ESLYMGVP V G A
Sbjct: 606 RLVCLG-ASERSEHLRSYDRIDIALDPFPQNGGISTFESLYMGVPVVAKLGRGAASRAAG 664
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+LT GL +A ++D Y+++A A+ LA LR L ++++SP D N+ +E
Sbjct: 665 GILTAAGLADWVADDDDGYIRIAKSFAAQPELLAKLRPELPGMVARSPAGDVANYTRCVE 724
Query: 538 STYRNMWHRYC 548
YR W +C
Sbjct: 725 GAYRQFWRDHC 735
>gi|72383071|ref|YP_292426.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
gi|72002921|gb|AAZ58723.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
Length = 909
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 169/577 (29%), Positives = 277/577 (48%), Gaps = 49/577 (8%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG+ ++ A Y A P A+A +NLG + KD L A Y+ A+ I
Sbjct: 344 FNLGIILKDLGNLQDAEFSYRQAIQIKPDYADAYSNLGNVLKDLGKLKDAELSYRKAIQI 403
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP++++ +NLG V G + A KAI P YA+AY+NLG + ++ + + AI+
Sbjct: 404 KPDYAEVYSNLGNVLKDLGNLQDAEFSYRKAIQIKPDYADAYSNLGNILKELSNFTDAIN 463
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF-----------EAHRDWG------- 163
++ LK++ + +A + I + D++ +A WG
Sbjct: 464 QFKDALKLNNELTSAQTGLMSTQGNICDWSDEETHNKWLKSLGIKGKAINPWGLLSLEDN 523
Query: 164 -----KRFMRLY-------SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYH 211
KR + Y +QY P+ + IGY S D+ TH V I L H
Sbjct: 524 PLNHLKRSKKFYKEKYVRATQYIK----PSPKSLIHIGYFSADFRTHPVMQLIAPLLELH 579
Query: 212 DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVEL 271
D +K+ +YS K D + E+ K G I+R+I +++ + + R D++DI V+L
Sbjct: 580 DKYRFKIYLYSFAPKED----EYTERAKKSGCIFRNIKNLNDIEAVELARSDQLDIAVDL 635
Query: 272 TGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRL 331
G+T +N++ + + + AP+Q+ ++GY + G TIDY I D + P E ++ + E++IR+
Sbjct: 636 MGYTRHNRMPIFSYRVAPIQINYLGYIGSIGSDTIDYIIADKITIPREYEKFYSEKVIRM 695
Query: 332 PECFLCYTPSPEAGPVCPTPALTN----GFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
P CF+C E + N GFI F FNN KIT K +W +L V S
Sbjct: 696 PNCFICDDHKKEITKESISRKDFNLPDQGFI-FTCFNNNYKITKKEFNIWMNLLRKVEGS 754
Query: 388 RL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
L + K +++ ++ S + + + LP+ H+ +SL D++LDTF
Sbjct: 755 VLWLYKSNQLSMNNL-YKEASKRKIDRDRIIFAEKLPM----SKHLARHSLGDLALDTFN 809
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
G TTC++L G+P +T G + SLLT +GL LI +E EY AL +AS+
Sbjct: 810 CNGGKTTCDALLAGLPLLTKIGQSFTARMSASLLTSLGLPELITYSESEYEDKALYIASN 869
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
+ L+ L SP+ + + F LE+ Y ++
Sbjct: 870 SEEIIRLKSKLNKSKETSPLFNSKLFTQDLENIYLDL 906
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ ++ A + A P AEA NLG+I KD NL A Y+ A+ I
Sbjct: 310 YNLGIILKDLGNLQDAEFYNRKAIQIKPDYAEAHFNLGIILKDLGNLQDAEFSYRQAIQI 369
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+++ + +NLG V GK+ A KAI P YAE Y+NLG + +D G++ A
Sbjct: 370 KPDYADAYSNLGNVLKDLGKLKDAELSYRKAIQIKPDYAEVYSNLGNVLKDLGNLQDAEF 429
Query: 122 AYEQCLKIDPDSRNAGQN 139
+Y + ++I PD +A N
Sbjct: 430 SYRKAIQIKPDYADAYSN 447
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 74/138 (53%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ E+ A + Y A NP+ A+A +NLG + KD DNL A Y+ A+ I
Sbjct: 174 YNLGIILKELGNLQDAELSYRKAIQINPNYADAYSNLGNVLKDLDNLQDAELSYRKAIQI 233
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+++ + +NLG V G + A KAI NP YAEA+ NLG L +D G + A
Sbjct: 234 NPSYADAYSNLGNVLKDLGNLQDAELSYRKAIQINPDYAEAHFNLGNLLKDLGKLQDAEL 293
Query: 122 AYEQCLKIDPDSRNAGQN 139
+Y + ++I D A N
Sbjct: 294 SYRKAIQIKSDYAEAHYN 311
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ K A + Y A NP+ A+A NLG+I K+ NL A Y+ A+ I
Sbjct: 141 NLGNVLKDLGKSQDAELSYRKAIQINPNYADAHYNLGIILKELGNLQDAELSYRKAIQIN 200
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN++ + +NLG V + A KAI NP+YA+AY+NLG + +D G++ A +
Sbjct: 201 PNYADAYSNLGNVLKDLDNLQDAELSYRKAIQINPSYADAYSNLGNVLKDLGNLQDAELS 260
Query: 123 YEQCLKIDPD 132
Y + ++I+PD
Sbjct: 261 YRKAIQINPD 270
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ A + Y A NP AEA NLG + KD L A Y+ A+ IK
Sbjct: 243 NLGNVLKDLGNLQDAELSYRKAIQINPDYAEAHFNLGNLLKDLGKLQDAELSYRKAIQIK 302
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+++++ NLG++ G + A KAI P YAEA+ NLG++ +D G++ A +
Sbjct: 303 SDYAEAHYNLGIILKDLGNLQDAEFYNRKAIQIKPDYAEAHFNLGIILKDLGNLQDAEFS 362
Query: 123 YEQCLKIDPDSRNAGQN 139
Y Q ++I PD +A N
Sbjct: 363 YRQAIQIKPDYADAYSN 379
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG ++ K A + Y A AEA NLG+I KD NL A + A+ I
Sbjct: 276 FNLGNLLKDLGKLQDAELSYRKAIQIKSDYAEAHYNLGIILKDLGNLQDAEFYNRKAIQI 335
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+++++ NLG++ G + A +AI P YA+AY+NLG + +D G + A
Sbjct: 336 KPDYAEAHFNLGIILKDLGNLQDAEFSYRQAIQIKPDYADAYSNLGNVLKDLGKLKDAEL 395
Query: 122 AYEQCLKIDPD 132
+Y + ++I PD
Sbjct: 396 SYRKAIQIKPD 406
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ A + Y A NP A+A +NLG + KD NL A Y+ A+ I
Sbjct: 209 NLGNVLKDLDNLQDAELSYRKAIQINPSYADAYSNLGNVLKDLGNLQDAELSYRKAIQIN 268
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ NLG + GK+ A KAI YAEA+ NLG++ +D G++ A
Sbjct: 269 PDYAEAHFNLGNLLKDLGKLQDAELSYRKAIQIKSDYAEAHYNLGIILKDLGNLQDAEFY 328
Query: 123 YEQCLKIDPD 132
+ ++I PD
Sbjct: 329 NRKAIQIKPD 338
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G ++ A ++ A NP+ A A +NLG + KD A Y+ A+ I
Sbjct: 107 NYGAILRDLGNLQDAELYTRKAIKINPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQIN 166
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN++ + NLG++ G + A KAI NP YA+AY+NLG + +D ++ A +
Sbjct: 167 PNYADAHYNLGIILKELGNLQDAELSYRKAIQINPNYADAYSNLGNVLKDLDNLQDAELS 226
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 227 YRKAIQINPSYADAYSN 243
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL--NNLGVVYTVQGKMDAAAEMIEKAIA 94
N + + N+ +A + YQ I FS + +N G + G + A KAI
Sbjct: 73 NQAFKFHSQGNIKEAAKNYQYF--INQGFSDHMVFSNYGAILRDLGNLQDAELYTRKAIK 130
Query: 95 ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
NP YA AY+NLG + +D G A +Y + ++I+P+ +A N
Sbjct: 131 INPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQINPNYADAHYN 175
>gi|166368783|ref|YP_001661056.1| hypothetical protein MAE_60420 [Microcystis aeruginosa NIES-843]
gi|166091156|dbj|BAG05864.1| TPR repeat protein [Microcystis aeruginosa NIES-843]
Length = 631
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 168/598 (28%), Positives = 277/598 (46%), Gaps = 49/598 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ D AI+ + A N + A A NNLG++ + +D L AV +Q A+
Sbjct: 39 NLGIIAVSKGDLDEAIICFNQAIRSNQNYAFAENNLGLVLQMQDKLGDAVVNFQEAIRKN 98
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN+ ++ NLG V +QGK + A + AI NP Y +AYN+L + + A+
Sbjct: 99 PNYPEAHFNLGNVLQLQGKTEEAIAYFQTAIKLNPKYIKAYNSLALALGRQDKVEAAMSV 158
Query: 123 YEQCLKIDP-------------------DSRNAGQNRL--LAMNYINEGHDDKL--FEA- 158
++Q L I P D+R A +L L + E + F++
Sbjct: 159 FKQALAIQPNSPEAFACLFSMKEMTCNWDTREADLIQLWQLTEKQLQERKTTAVTPFDSL 218
Query: 159 HRDWG---------------KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ W KR + L ++ ++++++ L IGY+ D+ H S+
Sbjct: 219 YKPWSATQQLKVASNYAQEIKRQLALITKPLNFNHSRTRSGRLKIGYLCHDFRNHPTSHL 278
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
+++ HD N++++ YS ++ +R ++ + DI + + A + D
Sbjct: 279 MQSVFGLHDRNNFEIIAYSYGPDDGSE---YRRRIANDCDRFYDIATLSITESAQRIFHD 335
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
+ ILV+L G+ + ++A +PAP+QV ++ YP T G IDY I D++ PPE+
Sbjct: 336 GVHILVDLMGYIDKARTQILALKPAPIQVNYLVYPGTMGADFIDYIIGDAIVTPPESADD 395
Query: 324 HVEELIRLPECFLC--YTPSPEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARI 380
E+L+ LP+ + Y + PV + L F FN+ KI P++ VW +I
Sbjct: 396 FTEKLVILPDSYQANDYQQIISSKPVTRSHYGLPESGFVFCCFNHTYKIEPQIFTVWMQI 455
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L VP S L + + ++ R + G+E R+ + + +H+ + L D+
Sbjct: 456 LANVPGSVLWLFSRVAEAEANLRR---EAQARGIEGDRL-IFAHLQPKSEHLARHQLADL 511
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LDT Y TT ++L+ G+P +T G+ VG SLLT +GL LI KN +EY LA
Sbjct: 512 FLDTLYYNAHTTGSDALWAGLPIITCPGATFPSRVGASLLTAIGLPELITKNLEEYKNLA 571
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
+ LA L ++ L P+ D F LE YR MW Y G P + R+
Sbjct: 572 INLAKSPDKLQEIKQKLAQNRLTYPLFDTLLFTRNLEKAYRTMWDIYAAGKSPEMIRI 629
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LGV + + D AI+ Y+ A NP+ AEA NNLG+I + +LD+A+ C+ A+
Sbjct: 4 HQLGVIMDSLGQIDQAILAYKQALLINPNYAEAHNNLGIIAVSKGDLDEAIICFNQAIRS 63
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
N++ + NNLG+V +Q K+ A ++AI NP Y EA+ NLG + + G AI
Sbjct: 64 NQNYAFAENNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEAHFNLGNVLQLQGKTEEAIA 123
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
++ +K++P A + LA+ G DK+
Sbjct: 124 YFQTAIKLNPKYIKAYNSLALAL-----GRQDKV 152
>gi|194292857|ref|YP_002008764.1| hypothetical protein RALTA_B2135 [Cupriavidus taiwanensis LMG
19424]
gi|193226761|emb|CAQ72712.1| conserved hypothetical protein, Tetratricopeptide repeats
[Cupriavidus taiwanensis LMG 19424]
Length = 749
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 253/535 (47%), Gaps = 19/535 (3%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A+ E A +P A G I R +A E + +L I P
Sbjct: 60 RHDEALAAVETALESHPKHARVLALAGAIEVQRARYQRAAELLKRSLDIDPKGHGVWQEY 119
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
V + + +A+ P + A N R+ G AI + + +DP
Sbjct: 120 AAVLYRLMDYEGSRLAGLQALRLAPNDSAALGNYASALRETGESVEAIAYFRKACAVDPT 179
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT-SWDNTKDPERPLVIGYV 191
R+ N L A Y ++ ++ + W + L + SW + R +G
Sbjct: 180 HRHNRTNLLFACLYDDKTDAAQILRETQSWAQTLAALAAVAPPSWPTRQGRVR---LGVF 236
Query: 192 SPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGI 251
S D H+ +YF+ L D ++VV+ S D T EK+ + + D+
Sbjct: 237 SNDLRLHACAYFLIPLLANLDRNRFEVVLVSLSPALDHIT----EKIRQYADEFLDVSRK 292
Query: 252 DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
E++V MVR +D LV+L G+ + L M Q APVQ+TW+GYP TTG+ I YRIT
Sbjct: 293 REEEVVTMVRAAGLDALVDLGGYAGASPLTYMVHQLAPVQLTWLGYPGTTGMRQIGYRIT 352
Query: 312 DSLADPPETKQKHVEELIRLPECFLCYTP--------SPEAGPVCPTPALTNGFITFGSF 363
D + DP + + + E L+R F Y P V TPAL NG+ITFG+
Sbjct: 353 DGIGDPAGSDKHYTETLLR-ASVFCAYHPLVTNPLGIYARRYRVNDTPALANGYITFGAC 411
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
+++AK+T L++WA +L A P SRL+++ DS+R R L+ L+ G+++ RVDL+
Sbjct: 412 HSMAKLTAPTLRLWAAVLAACPGSRLLIEASGLDQDSLRGRTLARLQANGIDTARVDLVA 471
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
N Y +DI+LDT P G TTTC++L+MGVP V++AGS+ V L
Sbjct: 472 RNSANQ--YVTYHRIDIALDTTPVTGGTTTCDTLWMGVPVVSLAGSMFHQRVSAPFLHAT 529
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
GL LI YV++A LA+DV L LR SLR + S +CD FA E+
Sbjct: 530 GLDDLICDTPQRYVEVASALAADVAQLNALRQSLRQRVESSAMCDAAGFARWFEA 584
>gi|374364677|ref|ZP_09622778.1| hypothetical protein OR16_00865 [Cupriavidus basilensis OR16]
gi|373103809|gb|EHP44829.1| hypothetical protein OR16_00865 [Cupriavidus basilensis OR16]
Length = 659
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 169/569 (29%), Positives = 255/569 (44%), Gaps = 51/569 (8%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
++ AI E A P +A V +++A Q L PN + +
Sbjct: 25 RYPEAIEHAEKAGKLAPGLYQAYYLRAVATLGLQQIEQAYRIAQDGLKAHPNQPDMIATV 84
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV------LYRDAGSISL-------- 118
+ + GK + A M+ +AA+P A+ N + L+ DA SL
Sbjct: 85 ARILSTMGKHEPARIMLRDCVAAHPRSLAAWANYAIVLQKLALHADAKHASLKALEIAPN 144
Query: 119 --------------------AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA 158
AI + +DPD+++ N L + + + L +
Sbjct: 145 NPAILANYANDLKDTGFAEDAISVLRKAAALDPDNKSIRSNLLFLLLFGEKTSAGDLLKE 204
Query: 159 HRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKV 218
+ + ER + IG +S D F H+ SY + + D ++V
Sbjct: 205 AGSFAQLLASKRRPLLHVQQRPASER-IRIGILSNDLFRHACSYILIPFIANLDRARFEV 263
Query: 219 VVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANN 278
V D T +K+ + D+ + E +V VRE+ +D+L++L G+T +
Sbjct: 264 VALGLHAYRDTVT----QKIAMYCDRFVDVANMAENEVVRTVREENLDLLIDLGGYTGTS 319
Query: 279 KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY 338
L M APVQ+TW+GYP +TG+P I +RITD + DP + + E L+R P F Y
Sbjct: 320 PLHYMVYGLAPVQLTWLGYPGSTGMPAIHHRITDWIGDPAGAESHYTENLLRAPGIFAVY 379
Query: 339 TP---------SPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL 389
P PE V TPA NGFITFGS NNL KIT + L++W+ L + +SRL
Sbjct: 380 YPMINSPLKAYQPEY-QVRETPATRNGFITFGSCNNLGKITDRTLRLWSTTLASCADSRL 438
Query: 390 VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAG 449
+V+ D VR L ++Q G+++ RV +P + Y +DI LDT P G
Sbjct: 439 LVEAAELDRDEVRIPLLERMQQAGIDTQRVSCIP--REGKNQYLTYHDIDIVLDTSPVTG 496
Query: 450 TTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTA 509
TTC++L+MGVP VT+A + V L +GL LI + E+ YV +A LAS +
Sbjct: 497 GNTTCDALWMGVPVVTLACAPFHTRVSAPFLHAMGLDELICETEEAYVTVAASLASSLDQ 556
Query: 510 LANLRMSLRDLMSKSPVCDGQNFALGLES 538
L LR+S+R KS + D FA ES
Sbjct: 557 LNALRLSMRHRFEKSAIFDAAGFARWFES 585
>gi|425448104|ref|ZP_18828084.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9443]
gi|389731183|emb|CCI04721.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9443]
Length = 1040
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 170/633 (26%), Positives = 281/633 (44%), Gaps = 83/633 (13%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECY------ 55
+ LGV + + D AI+ Y+ A NP+ A++ NNLG+I + +LD+A+ C+
Sbjct: 413 HQLGVIMDSLGQLDQAILAYKQALFINPNYAKSYNNLGIIAVSKGDLDEAIICFNQAIRS 472
Query: 56 ----------------------------QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
Q A+ PN+ ++ NLG V +QGK + A
Sbjct: 473 NQNYAFADNNLGLVLQMQDKLGDAGVKFQEAIRKNPNYPEAHFNLGNVLQLQGKTEEAIA 532
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG---------- 137
+ AI NP Y +AYN+L + + A+ ++Q L I P+S A
Sbjct: 533 YFQTAIKLNPKYIKAYNSLALALGRQDKVEAAMSVFKQALAIQPNSPEAFACLFSMKEMT 592
Query: 138 -----------QNRLLAMNYINEGHDDKL--FEA-HRDWG---------------KRFMR 168
Q L N + EG + F++ ++ W KR +
Sbjct: 593 CNWETREADLIQIWQLTENQLQEGKTTAVTPFDSLYKPWSASQQLKVASNYAQEVKRQLA 652
Query: 169 LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
L ++ ++++++ L IGY+ D+ H S+ +++ HD N++++ YS
Sbjct: 653 LVTKPLNFNHSRTRSGRLKIGYLCHDFRNHPTSHLMQSVFGLHDRNNFEIIAYSYGPDDG 712
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
++ +R ++ + DI + + A + D + ILV+L G+ + ++A +PA
Sbjct: 713 SE---YRRRIANDCDHFYDIATLSITESAQRIFNDGVHILVDLMGYIDKARTQILALKPA 769
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC--YTPSPEAGP 346
P+QV ++ YP T G IDY I D++ PPE+ E+L+ LP+ + Y + P
Sbjct: 770 PIQVNYLVYPGTMGADFIDYIIGDAIVTPPESADDFTEKLVILPDSYQANDYQQIISSKP 829
Query: 347 VCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRF 405
V + L F FN+ KI P++ VW IL VP S L + + ++ R
Sbjct: 830 VTRSQYGLPKSGFVFCCFNHTYKIEPQIFTVWMEILANVPGSVLWLFSRVAEAEANLRR- 888
Query: 406 LSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVT 465
+ G+E R+ + + +H+ + L D+ +DT Y TT ++L+ G+P +T
Sbjct: 889 --EAKARGIEGDRL-IFAHLEPKSEHLARHQLADLFIDTLYYNAHTTGSDALWAGLPIIT 945
Query: 466 MAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
G VG SLLT GL LI KN +EY LA+ LA L ++ L P
Sbjct: 946 CLGETFPSRVGASLLTATGLPELITKNLEEYKNLAINLAKSPDKLHEIKQKLAQNRLTYP 1005
Query: 526 VCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
+ D F LE YR MW Y G P + R+
Sbjct: 1006 LFDTLRFTRNLEKAYRTMWDIYAAGKSPEMIRI 1038
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y + + LK + AI Y+ + P A A + LGVI LD+A+ Y+ AL
Sbjct: 378 LYQQAYSLQKQLKLEDAIALYQQLINQYPQYAPAWHQLGVIMDSLGQLDQAILAYKQALF 437
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I PN+++S NNLG++ +G +D A +AI +N YA A NNLG++ + + A
Sbjct: 438 INPNYAKSYNNLGIIAVSKGDLDEAIICFNQAIRSNQNYAFADNNLGLVLQMQDKLGDAG 497
Query: 121 DAYEQCLKIDPD 132
+++ ++ +P+
Sbjct: 498 VKFQEAIRKNPN 509
>gi|429736730|ref|ZP_19270618.1| hypothetical protein HMPREF9163_01492 [Selenomonas sp. oral taxon
138 str. F0429]
gi|429154358|gb|EKX97092.1| hypothetical protein HMPREF9163_01492 [Selenomonas sp. oral taxon
138 str. F0429]
Length = 488
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 224/423 (52%), Gaps = 16/423 (3%)
Query: 128 KIDPDSRNAG-QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPL 186
+ D +R A N L+ ++YI ++++ AH + + + T + + K + +
Sbjct: 74 RTDHGARLAALSNYLMYLHYIEGVTNEEMRAAHSSYAE----MMGTLTQFSHGKRRRKRI 129
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
+GY+SP+ H V F +D + V +Y + T + V +
Sbjct: 130 RVGYLSPNLTDHIVLNFAIQLFASYDRTRFAVSLYDVGGQHSEVT----DWVTGMADRYV 185
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNK-LGMMACQPAPVQVTWIGYPNTTGLPT 305
D+ + A + D++DIL +L GH+A K L + A +PAPVQ++ IGY NTTGL
Sbjct: 186 DLSKFTPAEAARRIHADEVDILFDLAGHSAGGKTLQIAAYKPAPVQISGIGYFNTTGLSA 245
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNN 365
+DY + D++ADPPE E ++RLPE LC+TPS + + FGSFNN
Sbjct: 246 MDYFLGDAIADPPEMDALFTERILRLPETHLCFTPSERFRAYEQLQRAPHTPVVFGSFNN 305
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVK-CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
AKIT ++L W+ IL VP ++L++K P +R R E G++ R++L P
Sbjct: 306 FAKITDEMLTCWSEILRTVPTAQLLLKNVHPRAETLIRMR--QRAEHAGIDLARLELRPG 363
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
+ D+++ Y +DI LDT+PY G TTCE+L MG+P VTMAG+ H VSLL G
Sbjct: 364 ---SKDYLRDYLDVDIILDTYPYQGGGTTCEALCMGLPVVTMAGTRHGARFAVSLLKNAG 420
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
L LIA++ YV+ A+ LA+D LA L ++ +M SP+ DG + +E+ Y +W
Sbjct: 421 LGELIAESPAAYVERAIGLANDPELLAALHTAIPRMMRASPLMDGVRYVRAVEAAYEMIW 480
Query: 545 HRY 547
+Y
Sbjct: 481 EQY 483
>gi|425437323|ref|ZP_18817742.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9432]
gi|389677704|emb|CCH93372.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9432]
Length = 1059
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/598 (28%), Positives = 277/598 (46%), Gaps = 49/598 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ D AI+ + A N + A A NNLG++ + +D L AV +Q A+
Sbjct: 467 NLGIIAVSKGDLDEAIICFNQAIRSNQNYAFADNNLGLVLQMQDKLGDAVVNFQEAIRKN 526
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN+ ++ NLG V +QGK++ A + AI NP Y +AYN+L + + A+
Sbjct: 527 PNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIKLNPKYIKAYNSLALALGRQDKVEAAMSV 586
Query: 123 YEQCLKIDPDS-------------------RNAGQNRL--LAMNYINEGHDDKL--FEA- 158
++Q L I P+S R A +L L N + EG + F++
Sbjct: 587 FKQALAIQPNSPEAFACLFSMKEMTCNWETREADLIQLWQLTENQLQEGKSTAVTPFDSL 646
Query: 159 HRDWG---------------KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ W KR + L ++ ++++++ L IGY+ D+ H S+
Sbjct: 647 YKPWSATQQLKVASNYAQEIKRQLALITKPLNFNHSRTRSGRLKIGYLCHDFRNHPTSHL 706
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
+++ HD N++++ YS ++ +R ++ + DI + + A + D
Sbjct: 707 MQSVFGLHDRNNFEIIAYSYGPDDGSE---YRRRIANDCDRFYDIATLSITESAQRIFND 763
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
+ ILV+L G+ + ++A +PAP+QV ++ YP T G IDY I D++ PP++
Sbjct: 764 GVHILVDLMGYIDKARTQILALKPAPIQVNYLVYPGTMGADFIDYIIGDAIVTPPKSADN 823
Query: 324 HVEELIRLPECFLC--YTPSPEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARI 380
E+L+ LP+ + Y + PV + L F FN+ KI P++ VW I
Sbjct: 824 FTEKLVILPDSYQANDYQQIISSKPVTRSQYGLPESGFVFCCFNHTYKIEPQIFTVWMEI 883
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L VP S L + + ++ R + G+E R+ + + +H+ + L D+
Sbjct: 884 LANVPGSVLWLFSRVAEAEANLRR---EAKARGIEGDRL-IFAHLEPKSEHLARHQLADL 939
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LDT Y TT ++L+ G+P +T VG SLLT +GL LI KN +EY LA
Sbjct: 940 FLDTLYYNAHTTGSDALWAGLPIMTCLEETFPSRVGASLLTAIGLPELITKNLEEYKNLA 999
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
+ LA L ++ L P+ D F LE YR MW Y G P + R+
Sbjct: 1000 INLAKSPDKLHKIKQKLAQNRLTYPLFDTLLFTRNLEKAYRTMWDIYAAGKSPEMIRI 1057
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 5/154 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LGV + + D AI+ Y+ A NP+ AE+ NNLG+I + +LD+A+ C+ A+
Sbjct: 432 HQLGVIMDSLGQIDQAILAYKQALLINPNYAESHNNLGIIAVSKGDLDEAIICFNQAIRS 491
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
N++ + NNLG+V +Q K+ A ++AI NP Y EA+ NLG + + G I AI
Sbjct: 492 NQNYAFADNNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEAHFNLGNVLQLQGKIEEAIA 551
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
++ +K++P A + LA+ G DK+
Sbjct: 552 YFQTAIKLNPKYIKAYNSLALAL-----GRQDKV 580
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y + LK + AI Y+ + +P A A + LGVI +D+A+ Y+ AL
Sbjct: 397 LYRQAYTLQKQLKLEEAIALYQQLINQSPQYAAAWHQLGVIMDSLGQIDQAILAYKQALL 456
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I PN+++S NNLG++ +G +D A +AI +N YA A NNLG++ + + A+
Sbjct: 457 INPNYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNYAFADNNLGLVLQMQDKLGDAV 516
Query: 121 DAYEQCLKIDPD 132
+++ ++ +P+
Sbjct: 517 VNFQEAIRKNPN 528
>gi|313897099|ref|ZP_07830646.1| tetratricopeptide repeat family protein [Selenomonas sp. oral taxon
137 str. F0430]
gi|312974546|gb|EFR40014.1| tetratricopeptide repeat family protein [Selenomonas sp. oral taxon
137 str. F0430]
Length = 565
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 192/362 (53%), Gaps = 9/362 (2%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+SPD H V F A D ++V VY+ + D F E V ++ +
Sbjct: 197 LRIGYLSPDVREHVVLSFSYALFTALDPARFEVYVYAMNREDD-----FTEGVRRRVDCF 251
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
R++ G ++ A + ED+IDILV+L GHTA L ++A +PAPVQ++ IGY +TGL T
Sbjct: 252 RNLMGCTAQEAARRIYEDRIDILVDLAGHTAGGTLPVLAYRPAPVQMSGIGYFASTGLKT 311
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNN 365
+DY + D + ++ VE L+ LP C+ P A PA + FGS NN
Sbjct: 312 VDYFLADPILAAGRAQESFVERLLILPRTHFCWQPLRPAPTATHLPAAGRP-VVFGSLNN 370
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI 425
KI +VL+VWA IL VP +RL++K + F + GL RV+
Sbjct: 371 FTKINDRVLKVWAEILRRVPTARLLLKTEIFSVTDGAAEARRRIAAAGLPLARVETEGA- 429
Query: 426 LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL 485
+ D++ AY +DI+LDTFPY G TTC++LYMGVP VT+AG G SLL +G
Sbjct: 430 --SADYLAAYGRIDIALDTFPYPGGGTTCDALYMGVPVVTLAGETLGSRFGASLLRNIGA 487
Query: 486 KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
LIA +EY++ A+ LA D L L LR++ + SPV D + + + Y +W
Sbjct: 488 DALIAHTAEEYIERAVFLAQDAGMLDALHAGLRNMTAASPVMDAPAYGEAVGAAYEAVWG 547
Query: 546 RY 547
Y
Sbjct: 548 EY 549
>gi|417792677|ref|ZP_12440004.1| hypothetical protein CSE899_19079, partial [Cronobacter sakazakii
E899]
gi|333953236|gb|EGL71211.1| hypothetical protein CSE899_19079 [Cronobacter sakazakii E899]
Length = 384
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 213/388 (54%), Gaps = 30/388 (7%)
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
+N KDP R L IG++S D TH VS F+ D +++V Y+A D T R
Sbjct: 9 NNEKDPHRKLRIGFISGDLRTHPVSNFLLPFWESFDRTQFELVGYNAAPMHDEVTDHLRA 68
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
+ +WRD+ + ++++A + +D +DIL++L+GHT +L M A +PAP+Q+TWIG
Sbjct: 69 GTV----LWRDVSQLSDRELARQINDDGVDILIDLSGHTTWTRLPMFALRPAPLQMTWIG 124
Query: 297 YPNTTGLPTIDYR-ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN 355
YP TTG+P +DYR ++ +LA PP +++ E+++ +P + P P++ V P PAL N
Sbjct: 125 YPGTTGVPAMDYRLLSSTLASPPGLEEQFTEQILWVP-MRKIFEPHPQSPDVNPLPALRN 183
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD----SVRHRFLSTL-- 409
G++TF SFN K+ +VL++WA+IL P ++L++ F D ++ R L+
Sbjct: 184 GYLTFASFNRPKKVNDEVLELWAQILVREPGAKLLMG---FMADDEMIAMMTRRLTHFGA 240
Query: 410 --EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
EQL + +R L+ ++++ + +DI LD FPY G TTT +MGVP +T+
Sbjct: 241 RPEQL-IFKMRTGLI-------EYLEYHHHIDILLDAFPYTGGTTTNHGAWMGVPTLTLC 292
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV- 526
G A GV ++ GL +A ++ +YV AL L +R+S+R S+ P
Sbjct: 293 GETMAGRQGVDIMNGYGLPEFVANDKADYVDKALSWQGRFEELNAIRLSMR---SRIPTD 349
Query: 527 -CDGQNFALGLESTYRNMWHRYCKGDVP 553
DG A E R W YC G+ P
Sbjct: 350 NADGFRVADTFEKGLREAWKIYCTGEAP 377
>gi|124024786|ref|YP_001013902.1| hypothetical protein NATL1_00731 [Prochlorococcus marinus str.
NATL1A]
gi|123959854|gb|ABM74637.1| Hypothetical protein NATL1_00731 [Prochlorococcus marinus str.
NATL1A]
Length = 816
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 171/577 (29%), Positives = 274/577 (47%), Gaps = 57/577 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ A + + P CAEA +NLG I +D L A Y+ A+ I
Sbjct: 253 NLGNILSDLGNLKEAEISQKKTIELKPDCAEAHSNLGNILRDLGKLKDAELSYRKAIEIS 312
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN++ + +NLG + GK+ A KAI +P YA A+ NLG + +D G+ A+
Sbjct: 313 PNYANAHSNLGNILRDLGKLKGAELSYRKAIEISPNYANAHYNLGNILKDIGNFGDALKQ 372
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF---------MRLY--- 170
++Q LK++ + A ++ I + D+ H W K + L+
Sbjct: 373 FKQALKLNNELSLAKYALIITKGKICDWSDEV---THNIWLKSLGIQGKSIEPLGLFPLE 429
Query: 171 ---------SQYTSWDNTKDP-------ERPLV-IGYVSPDYFTHSVSYFIEAPLV-YHD 212
S+ +N P E+ ++ IGY S D+ TH V + APL+ HD
Sbjct: 430 DNPSNHLKRSKNYYIENFTRPSKCIQSYEKNIIHIGYFSADFRTHPVMQML-APLIEIHD 488
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+K+ +YS K D T E+ G I+++I +++ + + R DK+DI V+L
Sbjct: 489 KSRFKIYLYSLAKKEDEYT----ERAKMSGCIFKNITELNDIEAVELARSDKLDIAVDLM 544
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G+T NN++ + + + AP+Q+ ++G+P +TG TIDY I D++ P E ++ + E++IR+P
Sbjct: 545 GYTRNNRMPIFSYRVAPIQINYLGFPGSTGSDTIDYIIGDNITIPRENEKFYTEKIIRMP 604
Query: 333 ECFLCYTPSPEAG--PVCPTP--ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
CFLC E +C GFI F FN KIT K +W +L + S
Sbjct: 605 NCFLCDDNKKEISKESICRKDFNLPDQGFI-FTCFNENYKITKKEFNIWMNLLIKIEGSV 663
Query: 389 LVVKCKPFCC-----DSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLD 443
L + C R R ++ + E L ++ H+ +SL D++LD
Sbjct: 664 LWLYKSNQCSMNNLYKEARKRKVNPDRLIFAERLAMN---------KHLPRHSLGDLALD 714
Query: 444 TFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
TF Y G TT +L G+P +T G V SLL+ +GL LI +E EY + AL +
Sbjct: 715 TFNYNGGATTSCALLAGLPVLTKIGQSFMARVSASLLSSIGLSELITYSESEYEEKALYI 774
Query: 504 ASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
A++ + L+ L L S + + + F LES +
Sbjct: 775 ANNPKEILRLKSKLNKLKETSTLFNSELFTRDLESKF 811
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+YNLG ++ K A Y A NP+ EA NLG +D L A Y+ A+
Sbjct: 149 LYNLGTILSDLGKLQDAEFSYRQAIIINPNYTEAHYNLGNTLRDLGKLKDAELSYRKAIK 208
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I PN+++ NLG + GK+ A KAI NP +AEAY+NLG + D G++ A
Sbjct: 209 ISPNYAKVHCNLGTILRDLGKLKDAELYTRKAIQLNPDFAEAYSNLGNILSDLGNLKEAE 268
Query: 121 DAYEQCLKIDPDSRNAGQN 139
+ ++ +++ PD A N
Sbjct: 269 ISQKKTIELKPDCAEAHSN 287
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 8 YGEMLK----FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
YG +LK A + Y A NP+ A+A NLG +D L +A Y+ A+ I P
Sbjct: 84 YGVILKGFGNSQEAELLYRKAIELNPNFADAHYNLGNTLRDLGKLKEAELSYRKAIEISP 143
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N++ +L NLG + + GK+ A +AI NP Y EA+ NLG RD G + A +Y
Sbjct: 144 NYANTLYNLGTILSDLGKLQDAEFSYRQAIIINPNYTEAHYNLGNTLRDLGKLKDAELSY 203
Query: 124 EQCLKIDPD 132
+ +KI P+
Sbjct: 204 RKAIKISPN 212
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ K A ++ A NP AEA +NLG I D NL +A + + +K
Sbjct: 219 NLGTILRDLGKLKDAELYTRKAIQLNPDFAEAYSNLGNILSDLGNLKEAEISQKKTIELK 278
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ +++ +NLG + GK+ A KAI +P YA A++NLG + RD G + A +
Sbjct: 279 PDCAEAHSNLGNILRDLGKLKDAELSYRKAIEISPNYANAHSNLGNILRDLGKLKGAELS 338
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I P+ NA N
Sbjct: 339 YRKAIEISPNYANAHYN 355
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG ++ K A + Y A +P+ A+ NLG I +D L A + A+ +
Sbjct: 184 YNLGNTLRDLGKLKDAELSYRKAIKISPNYAKVHCNLGTILRDLGKLKDAELYTRKAIQL 243
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+F+++ +NLG + + G + A +K I P AEA++NLG + RD G + A
Sbjct: 244 NPDFAEAYSNLGNILSDLGNLKEAEISQKKTIELKPDCAEAHSNLGNILRDLGKLKDAEL 303
Query: 122 AYEQCLKIDPDSRNAGQN 139
+Y + ++I P+ NA N
Sbjct: 304 SYRKAIEISPNYANAHSN 321
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG ++ K A + Y A +P+ A NLG I D L A Y+ A+ I
Sbjct: 116 YNLGNTLRDLGKLKEAELSYRKAIEISPNYANTLYNLGTILSDLGKLQDAEFSYRQAIII 175
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PN++++ NLG GK+ A KAI +P YA+ + NLG + RD G + A
Sbjct: 176 NPNYTEAHYNLGNTLRDLGKLKDAELSYRKAIKISPNYAKVHCNLGTILRDLGKLKDAEL 235
Query: 122 AYEQCLKIDPDSRNAGQN 139
+ ++++PD A N
Sbjct: 236 YTRKAIQLNPDFAEAYSN 253
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N GVI K N +A Y+ A+ + PNF+ + NLG GK+ A KAI +
Sbjct: 83 NYGVILKGFGNSQEAELLYRKAIELNPNFADAHYNLGNTLRDLGKLKEAELSYRKAIEIS 142
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
P YA NLG + D G + A +Y Q + I+P+ A N
Sbjct: 143 PNYANTLYNLGTILSDLGKLQDAEFSYRQAIIINPNYTEAHYN 185
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N + + + N+ KA + YQ + + L N GV+ G A + KAI N
Sbjct: 49 NQAIQFHAQGNIQKAAKYYQYFIDQGFKDPRVLANYGVILKGFGNSQEAELLYRKAIELN 108
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
P +A+A+ NLG RD G + A +Y + ++I P+ N
Sbjct: 109 PNFADAHYNLGNTLRDLGKLKEAELSYRKAIEISPNYANT 148
>gi|407772275|ref|ZP_11119577.1| hypothetical protein TH2_00210 [Thalassospira profundimaris WP0211]
gi|407284228|gb|EKF09744.1| hypothetical protein TH2_00210 [Thalassospira profundimaris WP0211]
Length = 628
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/589 (27%), Positives = 266/589 (45%), Gaps = 53/589 (8%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L A+ ++ A ++ P ++ NL V Y+ ++A++CYQ A S
Sbjct: 45 LANAHSAQKDYEQAYACFKKVVDLAPQNPKSYQNLAVFYQGIGKFNEALQCYQKAASCDA 104
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N++ + N G+V G++DAA + KA+ +P +A+AYNNL ++ G A +Y
Sbjct: 105 NYAPAYNGAGIVLMTVGQLDAAQQYFAKALQLDPQFADAYNNLAHVFFTTGRFPAAAQSY 164
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYI-----------------NEGHDDKLFE--AHRDWGK 164
+ ++P +A NR ++ + EG D F D +
Sbjct: 165 AKATDLNPYLTSALANRFYSLAMMCDWSGIEGFSRVAKTLGTEGEDVSPFSLLVREDAPE 224
Query: 165 R--------FMRLYSQYTSWDNTKDPERP--LVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
R + Y + W T +RP L IGY S D+ H+ + L HD
Sbjct: 225 RQLARCRKFVLAKYGRGAKWQGTAPSKRPSKLRIGYFSADFHNHATLSLMMGMLRNHDRD 284
Query: 215 NYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGH 274
+++ +S ++++ + + D+ + +A + RE IDI ++L GH
Sbjct: 285 KFEIHGFSYGAIKQSQSLNDARDFFES---FSDVERASDADIAKLAREKNIDIAIDLKGH 341
Query: 275 TANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPEC 334
T + G+ A + APVQ+ ++GYP + G IDY I D + P KQ E+LI LP C
Sbjct: 342 TQMGRTGIFAQRLAPVQINYLGYPGSIGADFIDYMIVDKVTAPETHKQYFSEKLIYLPNC 401
Query: 335 FLCYTPSPEAGPVCPTPALTNGF------ITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
Y P+ + + T F F SFNN KITP+ +W R+L V S
Sbjct: 402 ---YQPNDDQRRIPATNTTRADFGLPETGFVFCSFNNTYKITPREFDIWMRLLSKVEGSV 458
Query: 389 L-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDISLDT 444
L + K + +++R ++ G++ R+ D +P +H+ + D+ LDT
Sbjct: 459 LWLFKGNDYAAENLRKE----AQKRGIDPGRLVFADKMP----EPEHLARHKHADLLLDT 510
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
F TT ++L+ G+P VT+ G A V S+LT L LIAK+E +Y +AL LA
Sbjct: 511 FNVNAHTTASDALWAGLPLVTLPGEQFAARVAASILTAANLPELIAKDEADYEAIALDLA 570
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A L+ L++ + P+ D + +E+ + + RY KG P
Sbjct: 571 LHPEKTAALKQKLQEQIKTCPLFDTVTYTRDIEAAFEAAYDRYLKGLAP 619
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+F +AI E P A L + + + ++A C++ + + P +S NL
Sbjct: 20 QFGLAISICEKHLKTEPDAAVIWVLLANAHSAQKDYEQAYACFKKVVDLAPQNPKSYQNL 79
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
V Y GK + A + +KA + + YA AYN G++ G + A + + L++DP
Sbjct: 80 AVFYQGIGKFNEALQCYQKAASCDANYAPAYNGAGIVLMTVGQLDAAQQYFAKALQLDPQ 139
Query: 133 SRNAGQN 139
+A N
Sbjct: 140 FADAYNN 146
>gi|148257752|ref|YP_001242337.1| SPINDLY family O-linked N-acetylglucosamine transferase
[Bradyrhizobium sp. BTAi1]
gi|146409925|gb|ABQ38431.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. BTAi1]
Length = 740
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 264/549 (48%), Gaps = 9/549 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G+A+ E+ F++A + A P AE + G ++ +A + A++
Sbjct: 195 LVNKGLAHLELHHFELAEATFNTARAVRPSNAELLAHRGRLFMLSGRNAEAEAEFDAAVA 254
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + + G + A ++ + NPT A LG G I AI
Sbjct: 255 LDPRLQVGWQGKAQIAMLNGNIAQAMAACKRVLDQNPTAQVALTLLGACQGRLGDIEGAI 314
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD-WGKRFMRLYSQYTSWDNT 179
++Q L + PD A ++ +++++ G D + +A R W + +
Sbjct: 315 ARFDQALAVQPDYDEAITKKIFYLDFLS-GADFAVQQAARYYWWVAVGSKFPRRKLAARA 373
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
DPER +V+GYVS D+ THS ++ L HD +V YS+ + D T F+
Sbjct: 374 LDPERRIVVGYVSADFRTHSAAFAFLPVLRGHDKTQVQVNCYSSSPRHDDLTATFQSI-- 431
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+W + + + ++A ++ D +DILV+L+G+T ++ + A +PAP+QVT G
Sbjct: 432 --ADVWVEAANLSDDELADRIQADGVDILVDLSGYTTGTRMPVFARKPAPIQVTAWGSGT 489
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFIT 359
TGL T+DY D + P + E + LP + P + P P P L NG +T
Sbjct: 490 GTGLATMDYFFADPVTVPANVRPLFAERVHDLPSV-ITIDPLLDIPP-SPPPMLQNGHVT 547
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FG +N + KI+ + + +WAR+L VP+++LVVK VR L G++ R+
Sbjct: 548 FGVYNRIDKISDEAIALWARLLGEVPDAKLVVKHLALNDPLVRDGLLGRFVTQGVKESRI 607
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
L +H++++ +DI+LD FP G +T E+LYMGVP V G+ A +
Sbjct: 608 LCLG-ASARSEHLRSFDRIDIALDPFPQNGGISTFEALYMGVPVVAKLGAGAASRAAGGI 666
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
LT GL +A ++D Y+++A A+ LA LR L +++SP D ++ +E+
Sbjct: 667 LTAAGLSDWVADDDDGYIRIAKTFAAQPELLAQLRTELPGKVARSPAGDVAHYTRCVEAG 726
Query: 540 YRNMWHRYC 548
YR W YC
Sbjct: 727 YRQFWRDYC 735
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P C +A + LGV +A A++++PN + + +NLG + + A
Sbjct: 53 PSCFDAMHLLGVSLVTSSRFVEATGFLTQAVALEPNSADAQSNLGWALVNCERYEEARAA 112
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
+E+++A P + NL + A+DA + L++ PD ++ NR +A
Sbjct: 113 LERSLALRPNAPVTWRNLAIALLRLKQGEAALDAATRALQLKPDDVDSWCNRSVA 167
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M+ LGV+ +F A F A P+ A+A +NLG + + ++A + +L+
Sbjct: 59 MHLLGVSLVTSSRFVEATGFLTQAVALEPNSADAQSNLGWALVNCERYEEARAALERSLA 118
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
++PN + NL + + +AA + +A+ P +++ N V
Sbjct: 119 LRPNAPVTWRNLAIALLRLKQGEAALDAATRALQLKPDDVDSWCNRSV 166
>gi|254431323|ref|ZP_05045026.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
putative [Cyanobium sp. PCC 7001]
gi|197625776|gb|EDY38335.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
putative [Cyanobium sp. PCC 7001]
Length = 747
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 251/505 (49%), Gaps = 14/505 (2%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA---YNNL 106
+A+ + AL ++P +L L ++ + A ++ + +A +P AE N L
Sbjct: 234 EAIPVLERALELQPADVPTLVQLAKLHWEVYNLSQAQDLGRQVLAIDPANAEIPYLLNAL 293
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166
DA + A+ A+ L DP SR A + ++ Y + ++ HR+
Sbjct: 294 PGRLGDARAHFEAVQAHHARLG-DPGSRLASSIAMASL-YCDHLEPGQVAALHRELCAPI 351
Query: 167 MRLYSQYTSWDNTKDP-ERPLVIGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAV 224
+ + DP RPL +G +S D+ H V+ F+ L + + +V VY+
Sbjct: 352 SARLEPARPFPSPADPHRRPLRLGLLSADFHRQHPVNLFMLPLLQRFNREELEVSVYATG 411
Query: 225 VKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMA 284
D T + R+ W + +D+ + +R+D IDIL++L GHT++++LG++A
Sbjct: 412 GMVDVYTRQARQAAAH----WVEAAPLDDGALQRRIRDDGIDILLDLAGHTSSHRLGVLA 467
Query: 285 CQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEA 344
+ APVQ T++GYP++TGL +ID+ I D + P E E + +LP C+ P +A
Sbjct: 468 LRAAPVQATFLGYPHSTGLTSIDWLIGDPVVSPAEHAHLFSEGIAQLPHSVFCWAPV-DA 526
Query: 345 GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR 404
P+ P P + FG FNN+ K++P + +WARIL AVP S L++K VRH
Sbjct: 527 YPL-PRPRAETAPVVFGCFNNVMKLSPSTIALWARILQAVPESSLLLKAPSLRDGLVRHS 585
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
F G+ R+ L L+ MQ Y +DI LD FPY G TTT ++L+MGVP V
Sbjct: 586 FQERFAAHGIGPHRLRLEGPTELS-VMMQTYGQIDIGLDPFPYNGGTTTLQALWMGVPVV 644
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
+ G +G S LT +G I + D Y ++A+ LAS V L R LR+ +++S
Sbjct: 645 VLEGGNFVSRMGASFLTSLGRPEWIGADPDSYARIAVALASQVHTLRRQRAELRERLARS 704
Query: 525 PVCDGQNFALGLESTYRNMWHRYCK 549
P+ D + ++ E +W + +
Sbjct: 705 PLGDIEAYSRDFERLLGRLWRAHTE 729
>gi|401565700|ref|ZP_10806522.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC6]
gi|400185552|gb|EJO19780.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC6]
Length = 497
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 222/414 (53%), Gaps = 13/414 (3%)
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDY 195
A N L+ ++Y++ +++L AH + L + +TK L IGY+SP+
Sbjct: 92 AMSNYLMDLHYVDGVSNEELRAAHLAYAT----LLGIPQPFTHTKRRREKLRIGYLSPNL 147
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H V F +D ++V +Y D ++ + V + D+ +K
Sbjct: 148 TDHIVLNFAIQLFAAYDRDRFEVYLYDI---GDLQS-EVTDWVAGMADRYVDLSKFSPQK 203
Query: 256 VAAMVREDKIDILVELTGHTANNK-LGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
A + D++DIL +L GH+A K L + A +PAPVQ++ IGY NTTGL +DY + D++
Sbjct: 204 SAEHIYADQVDILFDLAGHSAGGKTLQIAAYKPAPVQISGIGYFNTTGLSAMDYFLGDAI 263
Query: 315 ADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVL 374
DPPE VE+++RLP+ L +TPS + + FGSFNN +KIT +L
Sbjct: 264 VDPPEMDALFVEQIVRLPQTHLAFTPSERFREYEQIQRIPHEQPVFGSFNNFSKITDGML 323
Query: 375 QVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQA 434
+W IL VP + L++K + + R + E+ G++ R++L P + D+++
Sbjct: 324 VLWGEILRCVPKAHLLLKHTLPGMEPL-SRMRARAERAGIDLARLELRPG---SKDYLRD 379
Query: 435 YSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNED 494
Y +DI LDT+PY G TTCE+L+MG+P VT AG+ H VSLL VGL L+A++
Sbjct: 380 YLDVDIILDTYPYQGGGTTCEALFMGLPVVTTAGTRHGARFAVSLLKNVGLGELVAESPV 439
Query: 495 EYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
YV+ A+ LA+D LA L ++ +M SP+ DG + +E+ Y +W RY
Sbjct: 440 AYVERAVGLANDAELLAALHTAIPGMMRASPLMDGARYVRAVEAAYEMIWERYL 493
>gi|292670017|ref|ZP_06603443.1| TPR domain/SEC-C domain protein [Selenomonas noxia ATCC 43541]
gi|292648318|gb|EFF66290.1| TPR domain/SEC-C domain protein [Selenomonas noxia ATCC 43541]
Length = 468
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 216/410 (52%), Gaps = 13/410 (3%)
Query: 139 NRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTH 198
N L+ ++Y + D++L +AH + + + + K L IGY+SP+ H
Sbjct: 66 NYLMYLHYADGISDEELRDAHASYAA----MIGSVPRFPHEKHGREKLRIGYLSPNITDH 121
Query: 199 SVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
V F +D ++V +Y A + ++ R+ M G + D+ + ++ A
Sbjct: 122 IVLNFAVQLFSAYDRARFEVRLYDAGGQR-SEVTRWAAD-MADG--YADLSALSPQEAAE 177
Query: 259 MVREDKIDILVELTGHTANNK-LGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
+ D DIL +L GH+A K L + A +PAPVQ+ IGY NTTGL +DY + D + DP
Sbjct: 178 RIHADGTDILFDLAGHSAGGKTLQIAAYKPAPVQICGIGYFNTTGLAAMDYFLGDPICDP 237
Query: 318 PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
PET E ++RLP LC+TPS + + F SFNN AKIT ++LQ+W
Sbjct: 238 PETDALFTERILRLPRTHLCFTPSERFRTYENLRRVPHDSPVFASFNNFAKITDEMLQIW 297
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
IL AVP + L++K +++R R E+ G++ +R++L P + D+++ Y
Sbjct: 298 GGILRAVPGAHLLLKNVHPQRETLR-RMQRRAERAGIDPVRLELRPG---SKDYLRDYLD 353
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
DI LDT+PY G TTCE+L MG+P VT+AG+ H GVSLL GL L A + Y
Sbjct: 354 ADIILDTYPYQGGGTTCEALCMGLPVVTLAGTRHGARFGVSLLQNAGLGELAADSVQAYA 413
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
+ A LA D L L S+ +M SP+ DG + +E+ Y +W RY
Sbjct: 414 ERAALLAQDRELLTALHASVPRMMRASPLMDGAGYVRSVEAAYETIWERY 463
>gi|194335759|ref|YP_002017553.1| hypothetical protein Ppha_0637 [Pelodictyon phaeoclathratiforme BU-1]
gi|194308236|gb|ACF42936.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 4489
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 171/591 (28%), Positives = 284/591 (48%), Gaps = 54/591 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A E+ ++D A+V YE A P A+A +N G + + + D+A+ Y+ A++IK
Sbjct: 3907 NRGIALQELKRYDEALVSYEKALALKPDYAKAYSNRGSVLQALNRNDEALLSYERAIAIK 3966
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+++++ N GVV + D A E+AIA P A+ Y NLG+ R+ A+
Sbjct: 3967 QDYAEAYRNRGVVLKELKRYDEALLSYERAIAFKPDSADGYFNLGIALRELKRYDEALIN 4026
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE-----GHDDKL---FEAHRDWGKRF-------- 166
+++ L I+P RL M +I + H +L E H F
Sbjct: 4027 FDKTLFINPGYEFLFGVRLYTMMHICDWSTFKHHVSQLREKLERHEKASTPFPLLALIGS 4086
Query: 167 ----MRLYSQYTSWDNTKDPERPLV----------IGYVSPDYFTHSVSYFIEAPLVYHD 212
++ S Y + +PE PL+ IGY S D+ H+ +Y + HD
Sbjct: 4087 LLLQKQVSSDYVQEKYSANPELPLLVKRSRHDKIRIGYYSADFHNHATAYLMAELFEMHD 4146
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
++++ +S + R++V + D+ +++VA + RE +IDI V+L
Sbjct: 4147 RSRFEIIAFSF---GPDRQDEMRKRVAIAFDCFVDVRTQSDREVALLSRELEIDIAVDLK 4203
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G T +++ G+ A + AP+QV+++GYP T G IDY I D P + + E++ LP
Sbjct: 4204 GFTQDSRCGIFALRAAPIQVSYLGYPGTMGADYIDYLIADPTLIPESCRYGYTEKIAYLP 4263
Query: 333 ECF-LCYTPSPEAGPV-----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
+ + + T A V C P GFI F FNN KITP W R+L V
Sbjct: 4264 DSYQVNDTKRTIAERVFTRKECGLP--EKGFI-FCCFNNNYKITPVTFDGWMRLLRQVEG 4320
Query: 387 SRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDISL 442
S L +++ D++R + + G+++ R+ +PL +H+ L + L
Sbjct: 4321 SVLWLLEDNVTAADNLRKEAI----KRGIDAARIVFAQRMPLA----EHLARQRLGYLFL 4372
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
DTFP TT ++L++G+P +T+AG A V SLL + L LI ++EY LA+
Sbjct: 4373 DTFPCNAHTTASDALWVGLPVLTLAGESFASRVAASLLNAMQLPELITSTQEEYEALAID 4432
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+A++ L N+R L +P+ D + F +E+ Y M+ RY +G +P
Sbjct: 4433 VATNPEKLGNIRRKLEQNRLTTPLFDTELFTRNIEAAYDAMYERYQRGFLP 4483
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 157/588 (26%), Positives = 270/588 (45%), Gaps = 48/588 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+ G E+ +++ ++++Y+ A P A N G+ K D+AV Y A++++
Sbjct: 171 DYGNVLQELSRYEESLLYYDRALALEPDYVAAYFNRGLALKKLKRYDEAVLSYDKAIALE 230
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ +N G T + A ++A+A P YA+A+ N GV ++ A+ +
Sbjct: 231 PDYAEAHSNRGNALTELKRYHDAVLSYDRALALKPDYAKAHANRGVALQELKQYDEAVLS 290
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE--GHDDKLF------EAHRDWGKRF-------- 166
Y + L PD +L I + + ++F H + F
Sbjct: 291 YGRALACKPDYDFLFAEQLFLSVRICDWRSFEHQVFLLREKISRHENVSTPFPVLALVDS 350
Query: 167 -------MRLYSQYTSWDNTKDP-----ER--PLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
R+Y N P ER + IGY S D+ H+ +Y + HD
Sbjct: 351 PLLQQEAARIYVNAKHVINAPLPLIAKRERHEKIRIGYYSADFQNHATTYLMAELFERHD 410
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+ +++ +S K R +V + D+ +++VA + RE +IDI V+L
Sbjct: 411 RRRFELTAFSF---GPDKQDEMRTRVACAFDRFIDVRTRSDREVALLSRELEIDIAVDLK 467
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G T +++ G+ A + AP+QV+++GYP T G+ ++DY I D P ++Q + E+++ LP
Sbjct: 468 GFTTDSRTGIFALRAAPIQVSYLGYPGTMGMDSMDYLIADQTLIPVYSRQYYTEKIVFLP 527
Query: 333 ECFLCYTPSPEAGPV------CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
+ + C P GF+ F FNN KITP V W RIL V
Sbjct: 528 DSYQVNDTKRTIAEKDFTRKECGLP--EKGFV-FCCFNNNYKITPFVFDSWMRILRQVEG 584
Query: 387 SRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
S + + P +++R + G++S R+ I L +H+ + L D+ LDT
Sbjct: 585 SVFWIFEDNPKAAENLR----KEATRRGVDSNRLIFSKRIPLA-EHLARHRLADLFLDTH 639
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
P TT ++L+ G+P +T+AG V SLL + L LI ++EY LA++LA+
Sbjct: 640 PCNAHTTASDALWAGLPLLTLAGETFVARVAASLLNAIQLPELITCTQEEYEALAIELAT 699
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ L +R+ L +P+ D + F LE Y M+ RY G +P
Sbjct: 700 NPDRLKLIRLKLEKNRLTTPLFDTERFTHHLEEAYGVMYERYQDGLLP 747
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 161/603 (26%), Positives = 271/603 (44%), Gaps = 63/603 (10%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
D A V Y +P +A L I + N +AVE + A +I N SLNN G
Sbjct: 2293 LDDAEVLYRKILREDPEHFDALQLLATIAAQKKNFSEAVELFDQAFTINSNHPNSLNNWG 2352
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ D A +KA+ YAEAY N G+++ + +A+ +Y++ +
Sbjct: 2353 NALKELKRYDEAISSYDKAVTIKADYAEAYVNRGIVFEELKLYDMALSSYDKAFAV---- 2408
Query: 134 RNAGQN---------RLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDN-TKDPE 183
NAG + R+L ++++ + L +R ++ + D+ ++ E
Sbjct: 2409 -NAGYDFLPGMRFAIRMLFCDWVDFDNHVSLLREKIGHHERVSSPFTLFAISDSLSQQKE 2467
Query: 184 RPLV-------------------------IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKV 218
L+ + Y S D+ H+ +Y + HD N++
Sbjct: 2468 AALIYVDAKQALDHLLPVITKCLRHDKIRVAYYSADFHNHATAYLMAELFERHDRSNFEF 2527
Query: 219 VVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANN 278
+S ADA+ R +V + D+ +++VA + RE +IDI ++L G T ++
Sbjct: 2528 TAFS--FGADAQD-EMRRRVATAFDRFIDVRTQSDREVALLSRELEIDIAIDLKGFTQHS 2584
Query: 279 KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF-LC 337
+ G+ A + AP+QV+++GYP T G IDY I D P + E+++ LP+ + +
Sbjct: 2585 RPGIFALRAAPIQVSYLGYPGTMGAEYIDYLIADRTLIPESCWYGYTEKIVYLPDSYQVN 2644
Query: 338 YTPSPEAGPVCPTPAL---TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKC 393
T A V L GF+ F FNN KITP + W RIL V S L +++
Sbjct: 2645 DTKRLIAERVFTRKELGLPEIGFV-FCCFNNNYKITPVTFEGWMRILKRVEGSVLWLLED 2703
Query: 394 KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTT 453
P ++R + G+++ R+ + L +H+ + + D+ LDTFP TT
Sbjct: 2704 NPKAAANLR----KEATERGVDAERLIFAKRMPLA-EHLARHRIADLFLDTFPCNAHTTA 2758
Query: 454 CESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANL 513
++L+ G+P +T+AG A V SLL + L LI +++Y LA++LA++ L +
Sbjct: 2759 SDALWAGLPLLTLAGETFAARVAASLLNAIQLPELITFTQEKYEALAIELATNPEKLIAI 2818
Query: 514 RMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKF 573
R L +P+ D + F LE Y M+ RY +G P +VS ++
Sbjct: 2819 RQKLEKNRLTTPLFDTERFTHHLEEAYGVMYERYQEGLPPG---------HIVSLPSAEG 2869
Query: 574 SEP 576
SEP
Sbjct: 2870 SEP 2872
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 158/589 (26%), Positives = 273/589 (46%), Gaps = 50/589 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G + ++ A+ YE AF P AEA N + ++ + ++AV Y+ A+ IK
Sbjct: 1657 NRGNTLIALKRYGDALSSYERAFLLKPDYAEAFYNRALALQELERHEEAVSSYEKAICIK 1716
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ GV + D A +K IA P YA+A+ + G+ ++ A+ +
Sbjct: 1717 PDYAEAYYKRGVALQRLQRYDDALLCYDKVIALKPDYADAHYSRGLALQELQRYDEALIS 1776
Query: 123 YEQCLKIDPDSRNAG----QNRLLAMNYINEGHDDKLF----EAHRDWGKRFMRLYSQYT 174
Y+ + + PD R+ + ++ N H + E H+ F+ ++
Sbjct: 1777 YDAVIALKPDYPLVYGICLHMRMHSCDWANFDHYLSVIIEKIECHKYVAPPFI-FFASVD 1835
Query: 175 SWDNTK-------------DPERPLV----------IGYVSPDYFTHSVSYFIEAPLVYH 211
S K + E PL+ IGY S D+ H+ + + H
Sbjct: 1836 SLSLQKKVSTIFMQGIFPANHELPLIERHSRHERIRIGYYSADFHNHATANLMAELFERH 1895
Query: 212 DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVEL 271
D +++ +S ADA+ R +V + D+ +++VA + RE +IDI ++L
Sbjct: 1896 DRSRFELTAFS--FGADAQD-EMRRRVATAFDRFIDVRTQSDREVALLSRELEIDIAIDL 1952
Query: 272 TGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRL 331
G T + G+ + AP+QV+++G+P T G IDY I D P ++ + E+++ L
Sbjct: 1953 KGVTQYARPGIFTLRAAPIQVSYLGFPATMGAEYIDYLIADRTLIPESSRYGYTEKIVYL 2012
Query: 332 PECF-LCYTPSPEAGPV-----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
P+ + + T A V C P GF+ F FNN KITP W RIL V
Sbjct: 2013 PDSYQVNDTKRLIAERVFTRKECGLP--EKGFV-FCCFNNNYKITPVTFDGWMRILKRVE 2069
Query: 386 NSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
S L ++ P +++R ST + G+++ R+ + L +H+ + + D+ +DT
Sbjct: 2070 GSVLWLLGGNPKAVENLRKE--ST--ERGVDAERLIFAKRMPLA-EHLARHRIADLFIDT 2124
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
FP TT ++L+ G+P +T+AG V SLL + L LI ++EY LA++LA
Sbjct: 2125 FPCNAHTTASDALWAGLPLLTLAGETFVARVAASLLNAIQLPELITSTQEEYEALAIELA 2184
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
++ L +R L +P+ D + F LE Y ++ RY +G P
Sbjct: 2185 TNPEKLIAIRQKLEKNRLTTPLFDTERFTHHLEEAYGVIYERYQEGLPP 2233
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 161/611 (26%), Positives = 273/611 (44%), Gaps = 55/611 (9%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N +A + +++ A++ Y+ A NP A +N G K+ D+A+ Y A++
Sbjct: 962 FNQALALQHLKQYEEAVLSYDKAILLNPEYVAAYSNRGSALKELKRYDEALSNYGEAIAR 1021
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P F+++ N G T + A ++AIA YA AY N GV+ + A+
Sbjct: 1022 NPQFAEAYVNRGNALTDLKRYQDALLDYDRAIAVKLDYAIAYFNRGVIQQKLKLYEDAVL 1081
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHD--DKLFEAHRDWG---------------- 163
+Y+ +P RL A I + + + E G
Sbjct: 1082 SYDNAYTFEPTFDFLYGLRLYARMQICDWSIFYNNVRELREKIGRCEKVSIPFPVIALLD 1141
Query: 164 -----KRFMRLYSQYTSWDNTKDP--------ERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
K +LY Q N + P ER + IGY S D+ H+ +Y +
Sbjct: 1142 SLVLQKEVAKLYVQEKYPANHELPVMVNYPQHER-IRIGYYSADFHNHATTYLMAELFER 1200
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
HD +++ +S K R +V + D+ +++VA + RE +IDI ++
Sbjct: 1201 HDRSRFELTAFSF---GPDKQDEMRARVASAFDYFIDVRTRSDREVALLSRELEIDIAID 1257
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
L G T +++ G+ A + AP+QV+++G+P T G IDY I D P ++ + E+++
Sbjct: 1258 LKGFTQDSRPGIFALRAAPIQVSYLGFPGTMGAGYIDYLIADRTLIPERSQYGYTEKIVY 1317
Query: 331 LPECF-LCYTPSPEAGPVCPTPAL---TNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
LP+ + + T A + L GF+ F FNN KITP + W RIL V
Sbjct: 1318 LPDSYQINDTKRLIAKKLFTRKELGLPEIGFV-FCCFNNNYKITPLIFDGWMRILRQVEG 1376
Query: 387 SRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
S L + + ++R + G+++ R+ + L +H+ + + D+ LDTF
Sbjct: 1377 SVLWLFEDTQRAAQNLRREAIEK----GVDAERLIFAKRMPLA-EHLARHRIADLFLDTF 1431
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
P TT ++L+ G+P +T+AG A V SLL + L LI +++Y LA++LA+
Sbjct: 1432 PCNAHTTASDALWAGLPLLTLAGETFAARVAASLLNAIQLPELITFTQEKYEALAIELAT 1491
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQV 565
+ L +R L +P+ D + F LE Y ++ RY +G P +
Sbjct: 1492 NPEKLIAIRQKLEKNRMTTPLFDTERFTHHLEEAYGVIYERYQEGLPPG---------HI 1542
Query: 566 VSEEPSKFSEP 576
VS ++ SEP
Sbjct: 1543 VSLPSAEGSEP 1553
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 159/591 (26%), Positives = 269/591 (45%), Gaps = 50/591 (8%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y GVA + ++D A++ Y+ P A+A + G+ ++ D+A+ Y A++
Sbjct: 3042 LYKRGVALKRLQRYDDALLCYDKVIALKPDYADAHYSRGLALQELQRYDEALSNYGEAIA 3101
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P F+++ N G T + A ++AIA YA AY N GV+ + A+
Sbjct: 3102 RNPQFAEAYVNRGNALTDLKRYQDALLDYDRAIAVKLDYAIAYFNRGVIQQKLKLYEDAV 3161
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD--DKLFEAHRDWG--------------- 163
+Y+ +P RL A I + + + E G
Sbjct: 3162 LSYDNAYTFEPTFDFLYGLRLYARMQICDWSIFYNNVRELREKIGRCEKVSIPFPVIALL 3221
Query: 164 ------KRFMRLYSQYTSWDNTKDP--------ERPLVIGYVSPDYFTHSVSYFIEAPLV 209
K +LY Q N + P ER + IGY S D+ H+ + +
Sbjct: 3222 DSLVLQKEVAKLYVQEKYPANHELPVMVTYPQHER-IRIGYYSADFHNHATANLMAELFE 3280
Query: 210 YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILV 269
HD +++ +S + + R +V + ++ + +++VA + RE +IDI +
Sbjct: 3281 RHDRSRFELTAFSFGPEVQDE---MRARVAIAFDRFIEVRTLSDREVALLSRELEIDIAI 3337
Query: 270 ELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELI 329
+L G T + GM A + AP+QV+++G+P T G IDY I D P ++ + E+++
Sbjct: 3338 DLKGVTQYARPGMFALRAAPIQVSYLGFPATMGAEYIDYLIADRTLIPESSRYGYTEKIV 3397
Query: 330 RLPECF-LCYTPSPEAGPV-----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCA 383
LP+ + + T A V C P GF+ F FNN KITP W RIL
Sbjct: 3398 YLPDSYQVNDTKRLIAERVFTRKECGLP--EKGFV-FCCFNNNYKITPVTFDGWMRILKR 3454
Query: 384 VPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
V S L ++ P +++R ST + G+++ R+ + L +H+ + L D+ +
Sbjct: 3455 VEGSVLWLLGGNPKAVENLRKE--ST--ERGVDAERLIFAKRMPLA-EHLARHRLADLFI 3509
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
DTFP TT ++L+ G+P +T+AG A V SLL + L LI ++EY LA++
Sbjct: 3510 DTFPCNAHTTASDALWAGLPLLTLAGETFAARVAASLLNAIQLPELITSTQEEYEALAIE 3569
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
LA++ L +R L +P+ D + F +E Y ++ RY +G P
Sbjct: 3570 LATNPEKLTVIRQKLEKNRLTTPLFDTERFTHHIEEAYGVIYERYQEGLPP 3620
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G+ ++ ++D A++ Y A P A AC NLG + + D+A+ CY L IKP
Sbjct: 3773 GLVLTKLHRYDEAVLSYNRALILKPDYAAACYNLGNTLQKLNRYDEALVCYDKVLVIKPG 3832
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+++ +N G+ + D A EKA+A P YA+AY NLG + +D A+D Y+
Sbjct: 3833 DAEACSNRGITLKELQRYDEAVLSYEKALALRPDYADAYYNLGNVLQDLKRYREALDNYD 3892
Query: 125 QCLKIDPDSRNAGQNRLLAMN 145
+ L I P + NR +A+
Sbjct: 3893 KVLAIRPGDAHVYSNRGIALQ 3913
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG ++ ++D A+V Y+ P AEAC+N G+ K+ D+AV Y+ AL++
Sbjct: 3804 YNLGNTLQKLNRYDEALVCYDKVLVIKPGDAEACSNRGITLKELQRYDEAVLSYEKALAL 3863
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P+++ + NLG V + A + +K +A P A Y+N G+ ++ A+
Sbjct: 3864 RPDYADAYYNLGNVLQDLKRYREALDNYDKVLAIRPGDAHVYSNRGIALQELKRYDEALV 3923
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+YE+ L + PD A NR + +N +D+ L R
Sbjct: 3924 SYEKALALKPDYAKAYSNRGSVLQALNR-NDEALLSYER 3961
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+ E+ ++D A++ YE A P A+A NLG + +D +A++ Y L+I+
Sbjct: 3839 NRGITLKELQRYDEAVLSYEKALALRPDYADAYYNLGNVLQDLKRYREALDNYDKVLAIR 3898
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +N G+ + D A EKA+A P YA+AY+N G + + A+ +
Sbjct: 3899 PGDAHVYSNRGIALQELKRYDEALVSYEKALALKPDYAKAYSNRGSVLQALNRNDEALLS 3958
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
YE+ + I D A +NR + + + +D+ L R
Sbjct: 3959 YERAIAIKQDYAEAYRNRGVVLKELKR-YDEALLSYER 3995
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L + F A +E AF N C E NN G K+ D+A+ C+ A + P
Sbjct: 828 LATVAAQKRNFSEAAALFEQAFAINSDCPELLNNWGNTLKELKRYDEALHCFDRATELNP 887
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ ++ N G+ + D A + IA P Y E Y N G + ++ A+ +Y
Sbjct: 888 YYVEAYYNRGITLKELQRYDEALLSYDAVIALKPDYPEVYVNRGNVLKELLRCDEALLSY 947
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINE 149
L + PD A N+ LA+ ++ +
Sbjct: 948 NSALVLKPDYTQAYFNQALALQHLKQ 973
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
D A V Y H NP EA L + + + +A+E + AL+IKP+ +LNN G
Sbjct: 1600 LDDAEVLYREVVHSNPDYFEAVQLLATVAAQKQSFHEALELFDHALAIKPDHPITLNNRG 1659
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ A E+A P YAEA+ N + ++ A+ +YE+ + I PD
Sbjct: 1660 NTLIALKRYGDALSSYERAFLLKPDYAEAFYNRALALQELERHEEAVSSYEKAICIKPDY 1719
Query: 134 RNAGQNRLLAMNYINEGHDDKLF 156
A R +A+ + + +DD L
Sbjct: 1720 AEAYYKRGVALQRL-QRYDDALL 1741
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
D A V Y H NP EA L + + N +A+E + AL+IKP+ +LNN G
Sbjct: 2919 LDDAEVLYREVVHSNPDYFEAVQLLATVAAQKQNFHEALELFDHALAIKPDHPITLNNRG 2978
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ A E+A P YAEA N + ++ A+ YE+ + I PD
Sbjct: 2979 NTLIALKRYGDALSSYERAFLLKPDYAEACYNRALALQELERHEEALSGYEKAIGIKPDY 3038
Query: 134 RNAGQNRLLAMNYINEGHDDKLF 156
A R +A+ + + +DD L
Sbjct: 3039 VEALYKRGVALKRL-QRYDDALL 3060
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN G+ E+ ++D A++ Y+ P E N G + K+ D+A+ Y AL +
Sbjct: 894 YNRGITLKELQRYDEALLSYDAVIALKPDYPEVYVNRGNVLKELLRCDEALLSYNSALVL 953
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+++Q+ N + + + A +KAI NP Y AY+N G ++ A+
Sbjct: 954 KPDYTQAYFNQALALQHLKQYEEAVLSYDKAILLNPEYVAAYSNRGSALKELKRYDEALS 1013
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
Y + + +P A NR A+ + D
Sbjct: 1014 NYGEAIARNPQFAEAYVNRGNALTDLKRYQD 1044
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN +A E+ + + A+ YE A P EA GV K D A+ CY +++
Sbjct: 3009 YNRALALQELERHEEALSGYEKAIGIKPDYVEALYKRGVALKRLQRYDDALLCYDKVIAL 3068
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+++ + + G+ + D A +AIA NP +AEAY N G D A+
Sbjct: 3069 KPDYADAHYSRGLALQELQRYDEALSNYGEAIARNPQFAEAYVNRGNALTDLKRYQDALL 3128
Query: 122 AYEQCLKIDPDSRNAGQNR 140
Y++ + + D A NR
Sbjct: 3129 DYDRAIAVKLDYAIAYFNR 3147
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G + ++ A+ YE AF P AEAC N + ++ + ++A+ Y+ A+ IK
Sbjct: 2976 NRGNTLIALKRYGDALSSYERAFLLKPDYAEACYNRALALQELERHEEALSGYEKAIGIK 3035
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ ++L GV + D A +K IA P YA+A+ + G+ ++ A+
Sbjct: 3036 PDYVEALYKRGVALKRLQRYDDALLCYDKVIALKPDYADAHYSRGLALQELQRYDEALSN 3095
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
Y + + +P A NR A+ + D
Sbjct: 3096 YGEAIARNPQFAEAYVNRGNALTDLKRYQD 3125
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E+ ++D A+ ++ A NP+ EA N G+ K+ D+A+ Y +++K
Sbjct: 861 NWGNTLKELKRYDEALHCFDRATELNPYYVEAYYNRGITLKELQRYDEALLSYDAVIALK 920
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ + N G V + D A A+ P Y +AY N + + A+ +
Sbjct: 921 PDYPEVYVNRGNVLKELLRCDEALLSYNSALVLKPDYTQAYFNQALALQHLKQYEEAVLS 980
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y++ + ++P+ A NR
Sbjct: 981 YDKAILLNPEYVAAYSNR 998
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L + F A ++ A NP A NN G+ ++ D+A++CY AL K
Sbjct: 3704 LATVAAQRKNFPEAEELFDQALKINPAHATVWNNRGIALQELKRYDEALQCYDNALERKA 3763
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++ + G+V T + D A +A+ P YA A NLG + A+ Y
Sbjct: 3764 DYAAAFFYRGLVLTKLHRYDEAVLSYNRALILKPDYAAACYNLGNTLQKLNRYDEALVCY 3823
Query: 124 EQCLKIDPDSRNAGQNR 140
++ L I P A NR
Sbjct: 3824 DKVLVIKPGDAEACSNR 3840
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 2/150 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+ E+ +++ A++ ++ A NP EA N + K D+ V L+ K
Sbjct: 105 NYGIVLCEVKRYNDAVLSFDKAIALNPDYGEAALNREAVLKILKRYDEVV--LSCGLAFK 162
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N + ++ G V + + + ++A+A P Y AY N G+ + A+ +
Sbjct: 163 GNNAAVCSDYGNVLQELSRYEESLLYYDRALALEPDYVAAYFNRGLALKKLKRYDEAVLS 222
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
Y++ + ++PD A NR A+ + HD
Sbjct: 223 YDKAIALEPDYAEAHSNRGNALTELKRYHD 252
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L + F A+ ++ A P NN G A+ Y+ A +KP
Sbjct: 1624 LATVAAQKQSFHEALELFDHALAIKPDHPITLNNRGNTLIALKRYGDALSSYERAFLLKP 1683
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++++ N + + + A EKAI P YAEAY GV + A+ Y
Sbjct: 1684 DYAEAFYNRALALQELERHEEAVSSYEKAICIKPDYAEAYYKRGVALQRLQRYDDALLCY 1743
Query: 124 EQCLKIDPDSRNAGQNRLLAMN 145
++ + + PD +A +R LA+
Sbjct: 1744 DKVIALKPDYADAHYSRGLALQ 1765
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N G+A ++ ++D A++ Y+ A P AEA +N G + AV Y AL++
Sbjct: 204 FNRGLALKKLKRYDEAVLSYDKAIALEPDYAEAHSNRGNALTELKRYHDAVLSYDRALAL 263
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY 99
KP+++++ N GV + D A +A+A P Y
Sbjct: 264 KPDYAKAHANRGVALQELKQYDEAVLSYGRALACKPDY 301
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E+L+ D A++ Y A P +A N + + ++AV Y A+ +
Sbjct: 929 NRGNVLKELLRCDEALLSYNSALVLKPDYTQAYFNQALALQHLKQYEEAVLSYDKAILLN 988
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +N G + D A +AIA NP +AEAY N G D A+
Sbjct: 989 PEYVAAYSNRGSALKELKRYDEALSNYGEAIARNPQFAEAYVNRGNALTDLKRYQDALLD 1048
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y++ + + D A NR
Sbjct: 1049 YDRAIAVKLDYAIAYFNR 1066
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
NP +A L + + N +A ++ A +I + + LNN G + D A
Sbjct: 818 NPKHFDALQLLATVAAQKRNFSEAAALFEQAFAINSDCPELLNNWGNTLKELKRYDEALH 877
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
++A NP Y EAY N G+ ++ A+ +Y+ + + PD NR
Sbjct: 878 CFDRATELNPYYVEAYYNRGITLKELQRYDEALLSYDAVIALKPDYPEVYVNR 930
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 50/126 (39%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
D A V Y NP +A L + R N +A E + AL I P + NN G
Sbjct: 3680 LDDAEVLYREILRANPEHFDALRLLATVAAQRKNFPEAEELFDQALKINPAHATVWNNRG 3739
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ + D A + + A+ YA A+ G++ A+ +Y + L + PD
Sbjct: 3740 IALQELKRYDEALQCYDNALERKADYAAAFFYRGLVLTKLHRYDEAVLSYNRALILKPDY 3799
Query: 134 RNAGQN 139
A N
Sbjct: 3800 AAACYN 3805
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 66/173 (38%), Gaps = 32/173 (18%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
+ + + + D A Y P +A L +I R +A+ ++ A I
Sbjct: 39 ALTFHQQGRLDEAEAVYREILVTEPDQFDAFRLLAIIAAQRKQFHEAIALFERAFEINSE 98
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN----LGVLYR--------- 111
+ SLNN G+V + + A +KAIA NP Y EA N L +L R
Sbjct: 99 HANSLNNYGIVLCEVKRYNDAVLSFDKAIALNPDYGEAALNREAVLKILKRYDEVVLSCG 158
Query: 112 ------------DAGSISLAIDAYEQ-------CLKIDPDSRNAGQNRLLAMN 145
D G++ + YE+ L ++PD A NR LA+
Sbjct: 159 LAFKGNNAAVCSDYGNVLQELSRYEESLLYYDRALALEPDYVAAYFNRGLALK 211
>gi|254000485|ref|YP_003052548.1| hypothetical protein Msip34_2784 [Methylovorus glucosetrophus
SIP3-4]
gi|253987164|gb|ACT52021.1| TPR repeat-containing protein [Methylovorus glucosetrophus SIP3-4]
Length = 560
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 258/510 (50%), Gaps = 11/510 (2%)
Query: 45 RDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYN 104
R + +A+ Y +LS+ N + +G ++ K A E +E + +P +A
Sbjct: 32 RQDYFEALSKYTASLSLDGNQVPTWVRIGKIFLRTMKYQQARETMEFVLGMDPHNVDAIY 91
Query: 105 NLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164
L + Y G + A +Q +++ PD+ +R + I++ ++ + ++ WG+
Sbjct: 92 GLAISYFYLGKLEEARAFIDQAVEMQPDNATYAIDRA-NIYSISQPDPERKRQLYQAWGQ 150
Query: 165 RFMR-LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA 223
F L Q N ++P+R L +GYVS D H++++F+E +HD +V V+S
Sbjct: 151 CFADPLARQSPPLLNNRNPDRVLKVGYVSGDMRDHAIAFFMEPVFRHHDPSQVEVHVFST 210
Query: 224 VVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMM 283
++ D T + V W D+ +D+ + ++R ++D+LV+L+GHT ++L +
Sbjct: 211 AMQEDDTTAHLKSLVPH----WHDVSRLDDDALFKLIRSQQMDVLVDLSGHTYGHRLYVF 266
Query: 284 ACQPAPVQVTWIGY-PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP 342
A + APVQVTW+GY T G+ +DYR+TD DP + ++E+L RL EC Y P P
Sbjct: 267 ARRAAPVQVTWLGYMGGTLGMQAMDYRLTDYSTDPIGHEAYYLEKLYRL-ECMASYIP-P 324
Query: 343 EAGPVCPTPALTNGFI-TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
P+ TP + G T G N+ K+T ++L +W RI+ + +L+++ + D
Sbjct: 325 AHAPLVETPPMLQGNPPTIGCLNSSRKVTDRMLLLWKRIMEQRTDIQLLLQVQENSIDDA 384
Query: 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
H L +L ++ R+ + P++ L + M+ +L+D++LDT P +G TTT +L+MG+
Sbjct: 385 IHTIEPRLVELDMQLDRIIISPMVPLE-EFMERGALVDVALDTSPVSGGTTTLHTLWMGL 443
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P T+ + L +G +A +E+EY+ L L + L + R +R M
Sbjct: 444 PLATLDAEEAVSSTTARTLAGLGYGEWVATSEEEYISTVLTLLENPQVLVDFRRQIRSRM 503
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
+ D + + LE YR MW + G+
Sbjct: 504 QACRLMDYKGRCIELEKAYRRMWFNHLLGE 533
>gi|251789194|ref|YP_003003915.1| type 12 methyltransferase [Dickeya zeae Ech1591]
gi|247537815|gb|ACT06436.1| Methyltransferase type 12 [Dickeya zeae Ech1591]
Length = 1144
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 258/489 (52%), Gaps = 15/489 (3%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
++LGV+ +++A ++KA+ P +N+G+ + G + + +++
Sbjct: 659 DSLGVMLNAVQSLESAFSCMKKALELAPDNLAYISNMGMTCFNLGHKD-TLFYQRKVVEL 717
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF---MRLYSQYTSWDNTKDPERPL 186
PD+ N N LL ++ +E ++L++AH +G+R R Y+ ++ K ERPL
Sbjct: 718 APDAFNLHSNYLLGASHSDEMTPEELYKAHLFFGERVEMVSRRYNCRFNYSTNKVTERPL 777
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IG++S D+ H V+ F+E D + + + YS+ + D K ++ W
Sbjct: 778 RIGFISGDFGEHPVTNFLEPIWNALDRREFSLYAYSSFQRKDEKAASLKQTAAG----WH 833
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
D+ + + +VA ++ +D+IDIL++L+GHTA N+L +A +PAP+Q+TWIGYP TTG+ +
Sbjct: 834 DVDKMGDLEVATLINKDEIDILIDLSGHTAYNRLPALAMKPAPIQMTWIGYPGTTGMRAM 893
Query: 307 DYRI--TDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFN 364
DY + + + + + E+ I LP + P+ ++ V PAL+NG++TF SFN
Sbjct: 894 DYILLYKEFIGYAGKLDEFLTEKPIYLPAVKF-FEPNKDSPDVNVLPALSNGYLTFASFN 952
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
KI+ + L +W R+L A+PNSRL++ F S L +LG+ ++
Sbjct: 953 RPQKISDENLVLWGRVLVALPNSRLIIGY--MTGQETIDYFRSKLIELGVRDEQLSFRMR 1010
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
L+ ++++ + +DI LDT+PY G TT + +MGVP +T G A ++ +G
Sbjct: 1011 TGLS-EYLKMHHEVDILLDTYPYTGGTTIGHASWMGVPVLTREGDSLASKQSAVIMRVLG 1069
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
L IA+++DE + A + + L +R +R +M+ + + + ++ E R W
Sbjct: 1070 LDEFIAQSDDELIVKAQHWSHSLDKLNKIRSEMRGVMA-ARINSVDSPSIYFEKAMRRAW 1128
Query: 545 HRYCKGDVP 553
YC G+ P
Sbjct: 1129 EIYCAGERP 1137
>gi|126737136|ref|ZP_01752871.1| TPR repeat protein [Roseobacter sp. SK209-2-6]
gi|126721721|gb|EBA18424.1| TPR repeat protein [Roseobacter sp. SK209-2-6]
Length = 738
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 175/589 (29%), Positives = 266/589 (45%), Gaps = 51/589 (8%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y E + D AI Y+ A +P + NNL Y + + +A+ + A + P
Sbjct: 131 LGDVYQEQSQIDNAIALYKKAISLDPEHVNSLNNLANTYVNLGRISEALPLLETARAKAP 190
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ NLG G+ A + EKAI+ +P +A+ NL L AG LAI+ +
Sbjct: 191 QNALIAFNLGSAVLKTGQATRAKTLFEKAISLDPNLTQAHYNLAQLQSSAGEKELAIERF 250
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF-EAHRDWG-----------------KR 165
+ L+ +P RL A+ IN+ + + E R G
Sbjct: 251 DAILQENPADDRTRACRLDALAQINDWRWLQEYQECRRHLGLTGCSIPAFTALNLEDNPD 310
Query: 166 FMRLYSQYTSWDNTKDP-----------ERP--LVIGYVSPDYFTHSVSYFIEAPLVYHD 212
+RL Q ++ N + P ERP L IGY S D+ H+ + + HD
Sbjct: 311 LLRLRIQ--AYANERFPAVEPAPPCNHHERPKKLRIGYFSSDFHRHATMHLMGGLFAAHD 368
Query: 213 YQNYKVVVYS-AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVEL 271
+++ YS ADA R++V +RDI E + V+ DK+DI ++L
Sbjct: 369 KARFEIYAYSYDAAPADA----IRKRVQDAVTCFRDISTTQEAAILEQVKADKLDIAIDL 424
Query: 272 TGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRL 331
G T NNK + A + A +Q++++G+P T+G DY I D PP +++ E LIR+
Sbjct: 425 KGFTGNNKSHLFAHRLAGIQISYLGFPATSGSTAFDYFIGDHKTCPPGSERFFEEHLIRM 484
Query: 332 PECFLCYTPSPEAGPV------CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
P + S C P +GF+ F SFNN KITP+ +W R+L
Sbjct: 485 PNSYQANDNSRTISDKQYTRADCGLP--DDGFV-FCSFNNSYKITPREFDIWMRLLAQTD 541
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
S L + S F E+ G+++ R+ P L +H+ + D+ LD+F
Sbjct: 542 GSVLWLLQ---TSQSSTENFRQEAEKRGIDASRLIFAP-PLPQAEHLARQQVADLFLDSF 597
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
TT ++L+ GVP +T+ G A VG SLL VGL +IA +E +Y + AL+LA
Sbjct: 598 TVNAHTTGSDALWAGVPILTLPGKQFAARVGASLLHAVGLPEMIATSEADYEKRALELAH 657
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
D A+A +R L SP+ D FA LE + + R KG P+
Sbjct: 658 DTEAMAKIRGKLYRNRLNSPLFDTDRFARDLEKGFDLAFERSLKGQTPA 706
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG + NL++A C A + P + LG VY Q ++D A + +KAI+ +P
Sbjct: 97 LGRCHLQAGNLNEAATCLNKACELAPRSPNPYSALGDVYQEQSQIDNAIALYKKAISLDP 156
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145
+ + NNL Y + G IS A+ E P QN L+A N
Sbjct: 157 EHVNSLNNLANTYVNLGRISEALPLLETARAKAP------QNALIAFN 198
>gi|304438236|ref|ZP_07398178.1| TPR domain/SEC-C domain protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368843|gb|EFM22526.1| TPR domain/SEC-C domain protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 458
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 220/429 (51%), Gaps = 19/429 (4%)
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
A+E + D A N L+ ++Y + D+ + +AH + K + + +T
Sbjct: 39 AWELPREHHADRLAALSNYLMYLHYADGVTDEMMRDAHAAYAK----MLGSLPLFSHTVR 94
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
L IGY+SP+ H V F ++ Y+V +Y D T++
Sbjct: 95 KHGKLRIGYLSPNLTDHIVLNFAIQLFSAYNRSRYEVRLY------DIGTLQCETTDWVA 148
Query: 242 GGI--WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ-PAPVQVTWIGYP 298
G + + D+ ++ AA + D+IDIL +L GH+A K M+A PAPVQ++ IGY
Sbjct: 149 GMVDGYTDLSKYRPQEAAARIHADEIDILFDLAGHSAGGKTLMIAAHAPAPVQISGIGYF 208
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFI 358
NTTGL +DY + D DPP + E+++RLP+ LC+TPS P + +
Sbjct: 209 NTTGLSAMDYFLGDPFCDPPGEEAHFTEQILRLPQTHLCFTPSERFRPYEHLQRTPHENV 268
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK-CKPFCCDSVRHRFLSTLEQLGLESL 417
F SFNN AKIT +L W IL AVP +RL++K P R + + Q G++
Sbjct: 269 VFASFNNFAKITDAMLTAWGEILRAVPTARLLLKNVHPLKETLTRMKKRAV--QAGIDPA 326
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R++L P + D++ Y D+ LDTFPY G TTCE+L MG+P V AG+ H GV
Sbjct: 327 RLELRPG---SKDYLADYLDADVILDTFPYQGGGTTCEALCMGLPVVVRAGTRHGARFGV 383
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
SLL GL LIA + +EY++ A+ LA D T L L+ ++ +M SP+ +G + +E
Sbjct: 384 SLLHNAGLSELIAGSTEEYIERAVLLARDRTLLGALQTAIPRMMRASPLMNGMGYVRAME 443
Query: 538 STYRNMWHR 546
Y +W R
Sbjct: 444 DAYEMIWER 452
>gi|160896312|ref|YP_001561894.1| hypothetical protein Daci_0863 [Delftia acidovorans SPH-1]
gi|160361896|gb|ABX33509.1| TPR repeat-containing protein [Delftia acidovorans SPH-1]
Length = 647
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 148/478 (30%), Positives = 242/478 (50%), Gaps = 25/478 (5%)
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+ +AA +A+ NP A+ NLGV R +G + A++ Q ++++ + N
Sbjct: 180 QTEAAIPYYLQALKINPNSADVLANLGVACRQSGDLERALNYSRQAMQLNSSVPDFFSNY 239
Query: 141 LLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ-YTSWDNTKDPERPLVIGYVSPDYFTHS 199
L + ++ F HR + K F Y + + S N +D + L IGYVS D+ H+
Sbjct: 240 LFLLQSASDVSVQDKFLEHRRYAKIFEEPYKKLWASHQNRRDLSKVLRIGYVSGDFCDHA 299
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
+ +FIE L H++ +++ Y D T R R + W D + +++++ +
Sbjct: 300 LRFFIEPVLKNHNHDRFEIHCYYTNRIDDEHTKRLRSYADR----WVDCWNWNDEQLFSD 355
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP-P 318
+++ +IDILV+L+GHTA+N+L + A +PAP+Q+TW+GY +TTGL ID+RITD DP
Sbjct: 356 IQDQQIDILVDLSGHTAHNRLPVFARKPAPIQMTWLGYQSTTGLTAIDWRITDHSLDPVG 415
Query: 319 ETKQKHVEELIRLPEC--FLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQV 376
T++ + E L+RLP F SP + P LT TFG +N +K+T + L
Sbjct: 416 MTERFNSERLLRLPAAGVFAIDDNSPVFREL---PCLTGKQFTFGCLHNPSKVTMEALDA 472
Query: 377 WARILCAVPNSRLVV-KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
WA IL P + L++ VR R +G + + D LI + +Q Y
Sbjct: 473 WAEILLRAPATVLLMGNSTSLYAQKVRQR-------MGCKGVSSD--RLIFVERLSLQGY 523
Query: 436 ----SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
+D+ LDTFPY G TTT ++ MG+P + + VG+S++ GL
Sbjct: 524 LALHQRIDLMLDTFPYNGGTTTLHAIGMGLPTIVLGSESAISRVGMSIMQGYGLSEFCCL 583
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
+ ++YV A+ + LANLR L + ++K F GLE +R++W +C+
Sbjct: 584 DIEDYVVRAVDWSQRCEELANLRKILPERVAKQNARLALEFTQGLEKAWRDIWEDWCR 641
>gi|182677437|ref|YP_001831583.1| hypothetical protein Bind_0441 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633320|gb|ACB94094.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 1085
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 169/564 (29%), Positives = 269/564 (47%), Gaps = 50/564 (8%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P AE LG I +D D A+ Y+ AL+++P+F+ N+LG + +G+ A +
Sbjct: 210 RPDAAEPHMVLGNILRDLGQFDAALAAYEQALALRPDFAPVYNSLGNLLQRRGQYQEAHD 269
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP---DSRNAGQNRLLAM 144
AI P A+A+ LGV G AI+A+ L DP D R +R A+
Sbjct: 270 AYATAIQLQPNLAQAHAGLGVTLDSLGHPDQAIEAFRMALVYDPKRIDLRLWLHHRRRAI 329
Query: 145 ---NYINEGHDD--KLFEAHRDWGK---------------RFMRLYSQYTSWDN-----T 179
I E + +LF+ G R R + Q S+DN T
Sbjct: 330 CDWTGIMEEEAELLRLFKTEPHVGAPFPLISMDTSAAEQYRLCRAFGQ--SYDNKRQAYT 387
Query: 180 KDPE----RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK-TIRF 234
P R + IGY+S D++ H+ + + HD ++++ YS ++ +R
Sbjct: 388 HSPRPRGSRKVRIGYLSNDFYRHATALLMVELFERHDRDQFEIIAYSHGPDDSSELALRT 447
Query: 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTW 294
RE + + DI + + + AA++ ++IDILV+L G+T + + ++ +PAP+QV +
Sbjct: 448 REAFDR----FVDIRALSDTEAAALIHREEIDILVDLKGYTNDARTAILGLRPAPIQVNF 503
Query: 295 IGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-- 352
IG+P T G+ IDY I D+ P + + E+++ +P + + PT A
Sbjct: 504 IGFPGTMGVDFIDYIIADAFVLPMDQQPFFSEKIVHMPFSYQPNDTRRMIADLTPTRADC 563
Query: 353 --LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTL 409
+GF+ F FNN K+TP +W R+L AVP S +++ P ++++H
Sbjct: 564 GLPEDGFV-FCCFNNSYKLTPVFFDLWMRLLQAVPGSVFWLLESGPLVRENLQHE----A 618
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
E+ G++ R+ P I + DH+ + L D+ LD PY TTT ++L+ G+P +T AG
Sbjct: 619 EKRGIDPNRLVFAPRIAIP-DHLARHRLADLFLDCLPYNAHTTTSDALWAGLPVLTCAGE 677
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
A V SLL VGL LI + +Y AL LA + L LR +L +P+ D
Sbjct: 678 TFAGRVAGSLLQAVGLPELITTSLADYEARALHLARNPEDLRILRQTLLRQRKSAPLFDI 737
Query: 530 QNFALGLESTYRNMWHRYCKGDVP 553
+ LES YR MW R+ G P
Sbjct: 738 ALYTRHLESAYRQMWTRFEDGLAP 761
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 8 YGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQ 67
Y + D A Y+ P ++LG+I + +LD A+ + A+ +KP++++
Sbjct: 54 YHRAGRLDQAADLYQRILLAEPDHFLCLHHLGLIAHQKGDLDTAIAWIEKAIRVKPDYAE 113
Query: 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCL 127
+L NL +Y +G + A E A+ + A+ NLG D G A+ Y + +
Sbjct: 114 ALANLAALYRAKGLLTQAVETGRTAVLHGQDHVPAHCNLGGALEDQGEWEAALACYRRAV 173
Query: 128 KIDP 131
I+P
Sbjct: 174 AINP 177
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 74/189 (39%), Gaps = 37/189 (19%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+++LG+ + D AI + E A P AEA NL +Y+ + L +AVE + A+
Sbjct: 81 LHHLGLIAHQKGDLDTAIAWIEKAIRVKPDYAEALANLAALYRAKGLLTQAVETGRTAVL 140
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN--------------- 105
+ + NLG QG+ +AA +A+A NP + E N
Sbjct: 141 HGQDHVPAHCNLGGALEDQGEWEAALACYRRAVAINPAFIEGAMNAANVLRRLHRHEEAL 200
Query: 106 -------------------LGVLYRDAGSISLAIDAYEQCLKIDPDSR---NAGQNRLLA 143
LG + RD G A+ AYEQ L + PD N+ N L
Sbjct: 201 QTCEALIACRPDAAEPHMVLGNILRDLGQFDAALAAYEQALALRPDFAPVYNSLGNLLQR 260
Query: 144 MNYINEGHD 152
E HD
Sbjct: 261 RGQYQEAHD 269
>gi|402302461|ref|ZP_10821573.1| glycosyltransferases group 1 [Selenomonas sp. FOBRC9]
gi|400380528|gb|EJP33345.1| glycosyltransferases group 1 [Selenomonas sp. FOBRC9]
Length = 565
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/362 (37%), Positives = 192/362 (53%), Gaps = 9/362 (2%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+SPD H V F A D ++V VY A+ + DA F + V ++ +
Sbjct: 197 LRIGYLSPDVREHVVLSFSYALFTALDTTRFEVYVY-AMNREDA----FTDGVRRRVTCF 251
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
R++ G ++ A + ED+IDILV+L GHTA L ++A +PAPVQ++ IGY ++TGL T
Sbjct: 252 RNLMGCTAQEAAHRIYEDQIDILVDLAGHTAGGTLPVLAYRPAPVQMSGIGYFSSTGLKT 311
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNN 365
+DY + D + ++ VE L+ LP C+ P P I FGS NN
Sbjct: 312 VDYFLADPVLAAGRAQEGFVERLLVLPRTHFCWQPL-RPAPPAAHLPAAGRPIVFGSLNN 370
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI 425
KI +VLQVWA IL VP +RL++K + F + G+ RV+
Sbjct: 371 FTKINDRVLQVWAEILRRVPTARLLLKTEIFSVSDGAAEARRRIAAAGIPPERVETEGA- 429
Query: 426 LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL 485
+ D++ AY +DI+LDTFPY G TTC++LYMGVP VT AG G SLL +G
Sbjct: 430 --SADYLAAYGRIDIALDTFPYPGGGTTCDALYMGVPVVTRAGETLGSRFGASLLRNIGA 487
Query: 486 KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
LIA E+EY++ A+ LA D L L LR + + SPV D + + + Y +W
Sbjct: 488 DALIAYTEEEYIERAVFLAQDFDTLDALHAGLRRMTAASPVMDAPAYGTVVGAAYEAVWA 547
Query: 546 RY 547
Y
Sbjct: 548 EY 549
>gi|297537710|ref|YP_003673479.1| hypothetical protein M301_0518 [Methylotenera versatilis 301]
gi|297257057|gb|ADI28902.1| TPR repeat-containing protein [Methylotenera versatilis 301]
Length = 551
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 243/485 (50%), Gaps = 19/485 (3%)
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G+ Q + AA+ E+AI P Y A NNLG++ +D G I I ++Q L++ P
Sbjct: 69 GLALKTQHDLIGAAQAFERAIELKPDYVAAINNLGIVKKDLGDIEQGIACFQQALQLKPS 128
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWD-----NTKDPERPLV 187
+ N L +++ + + L++ H +F + Y T + N K R L
Sbjct: 129 FASCFSNLLFCLSHDDASTAEILWQRH----CQFAQYYESATKANIKKHTNLKAQGRTLN 184
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IG+VS D HS+S F E PL+ + +N ++ +Y+ A R KV K W+
Sbjct: 185 IGFVSADLREHSLSNFFE-PLLPYLQKNPELNLYAYAATAIEDATSERLKVYFKQ--WQV 241
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
+ ++++ +A +R D IDILV+L GHT+ N+L M A +PAP+QV+W+GY TTGL +D
Sbjct: 242 VDQMNDEDLANKIRRDAIDILVDLDGHTSGNRLTMFALKPAPIQVSWLGYLATTGLNNMD 301
Query: 308 YRITDSLADPPETKQKH-VEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNL 366
Y + D P K E+L++LP ++P E+ V PAL NG++TF FN
Sbjct: 302 YYLGDEYLLPQGLLDKQFTEKLVQLP-INAPFSPVAESPEVNSLPALNNGYLTFACFNRT 360
Query: 367 AKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH-RFLSTLEQLGLESLRVDLLPLI 425
KIT +Q+W+ +L +P S+ ++ S H + L +Q G+++ R+ P
Sbjct: 361 NKITQSTVQLWSSVLVQLPTSKCLLIGD---AQSGNHQKILDWFKQYGVDASRLVWTPRT 417
Query: 426 LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL 485
+ ++ + +D+ LDT P G TTTC + +MGVP + +AG +++ + L
Sbjct: 418 SM-QGYLALHHQVDVCLDTMPANGVTTTCYAAWMGVPTLCIAGDRMISRGAQAVMRHLSL 476
Query: 486 KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
+ + Y+ A A + LA++R LR +S A L +R MW
Sbjct: 477 DDFVVADAAAYLAKASYFAENFVELADVRQQLRSRFKQSLFSQPDIAANALYIAFRQMWK 536
Query: 546 RYCKG 550
R+C G
Sbjct: 537 RWCAG 541
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+E A P A NNLG++ KD ++++ + C+Q AL +KP+F+ +NL
Sbjct: 85 FERAIELKPDYVAAINNLGIVKKDLGDIEQGIACFQQALQLKPSFASCFSNL 136
>gi|320530500|ref|ZP_08031558.1| conserved domain protein [Selenomonas artemidis F0399]
gi|320137333|gb|EFW29257.1| conserved domain protein [Selenomonas artemidis F0399]
Length = 565
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/362 (37%), Positives = 192/362 (53%), Gaps = 9/362 (2%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+SPD H V F A D ++V VY A+ + DA F + V ++ +
Sbjct: 197 LRIGYLSPDVREHVVLSFSYALFTALDTTRFEVYVY-AMNREDA----FTDGVRRRVTCF 251
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
R++ G ++ A + ED+IDILV+L GHTA L ++A +PAPVQ++ IGY ++TGL T
Sbjct: 252 RNLMGCTAQEAAHRIYEDQIDILVDLAGHTAGGTLPVLAYRPAPVQMSGIGYFSSTGLKT 311
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNN 365
+DY + D + ++ VE L+ LP C+ P P I FGS NN
Sbjct: 312 VDYFLADPVLAAGRAQEGFVERLLVLPRTHFCWQPL-RPAPPAAHLPAAGRPIVFGSLNN 370
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI 425
KI +VLQVWA IL VP +RL++K + F + G+ RV+
Sbjct: 371 FTKINDRVLQVWAEILRRVPTARLLLKTEIFSVSDGAAEARRRIAAAGIPPERVETEGA- 429
Query: 426 LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL 485
+ D++ AY +DI+LDTFPY G TTC++LYMGVP VT AG G SLL +G
Sbjct: 430 --SADYLAAYGRIDIALDTFPYPGGGTTCDALYMGVPVVTRAGETLGSRFGASLLRNIGA 487
Query: 486 KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
LIA E+EY++ A+ LA D L L LR + + SPV D + + + Y +W
Sbjct: 488 DALIAYTEEEYIERAVFLAQDFDTLDALHAGLRRMTAVSPVMDAPAYGTVVGAAYEAVWA 547
Query: 546 RY 547
Y
Sbjct: 548 EY 549
>gi|357059077|ref|ZP_09119922.1| hypothetical protein HMPREF9334_01639 [Selenomonas infelix ATCC
43532]
gi|355372985|gb|EHG20323.1| hypothetical protein HMPREF9334_01639 [Selenomonas infelix ATCC
43532]
Length = 488
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 215/421 (51%), Gaps = 29/421 (6%)
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDY 195
A N L+ ++Y++ D++L AH + L + + K L IGY++P
Sbjct: 83 ALSNYLMDLHYVDGLSDEELCAAHLTYAV----LLGSVEPFTHAKRRREKLRIGYLTPSL 138
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIY----GI 251
H V F +D ++V +Y R + VM+ D Y
Sbjct: 139 TDHIVLNFAIQLFAAYDRSCFEVYLYD--------LGRQQSDVMEWVAGMTDHYHCFAQA 190
Query: 252 DEKKVAAMVREDKIDILVELTGHTANNK-LGMMACQPAPVQVTWIGYPNTTGLPTIDYRI 310
+ A + D IDIL +L GHTA K L + A +PAPVQ++ IGY NTTGLP +DY +
Sbjct: 191 AAEDAARRIYADGIDILFDLAGHTAGGKTLQIAAYKPAPVQISGIGYFNTTGLPAMDYVL 250
Query: 311 TDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKIT 370
D + DPP E ++RLP LC+TPS + + FGSFNN +KIT
Sbjct: 251 GDPIVDPPSMDALFTERILRLPHTHLCFTPSERFRDYENLHRVPHDPPVFGSFNNFSKIT 310
Query: 371 PKVLQVWARILCAVPNSRLVVK----CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLIL 426
++L++W IL AVP +RL++K + C R + E+ G++ R+DL P
Sbjct: 311 DEMLRLWGEILAAVPRARLLLKNVHPSREALC-----RMRTRAERAGIDMERLDLRPG-- 363
Query: 427 LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLK 486
++++ Y +DI LDT+PY G TTCE+L+MG+P VTMAG+ H G LL VGL
Sbjct: 364 -TREYLRDYLEVDIILDTYPYQGGGTTCEALFMGLPVVTMAGTRHGARFGAGLLHNVGLA 422
Query: 487 HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
L+ ++ Y A+ LASD L L ++ +M SP+ DG+ + +E+ Y+ +W R
Sbjct: 423 ELVTEDSAAYTACAVGLASDRELLTALHTAIPHMMRASPLMDGRGYVRAVETAYKMIWER 482
Query: 547 Y 547
Y
Sbjct: 483 Y 483
>gi|358638909|dbj|BAL26206.1| hypothetical protein AZKH_3922 [Azoarcus sp. KH32C]
Length = 922
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 203/365 (55%), Gaps = 17/365 (4%)
Query: 182 PER--PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
PER + +GY SPD+ HSV YF L HD +++V+Y + K D T R REK
Sbjct: 151 PERTSKIRVGYWSPDFRNHSVRYFFRPLLENHDRDRFEIVLYHDIPKGDESTERIREKAD 210
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ D+ + + ++ ++R +D+LVEL GHT+NN+L ++ + A +Q++ IGYP
Sbjct: 211 H----FIDVSALPDAQLVTLIRSHDLDVLVELAGHTSNNRLNLLQERLATLQLSGIGYPP 266
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT-PALTNGFI 358
TTGL TID ++ D ++ + + E + LPE F C+ P EA P+ PT PA NGF
Sbjct: 267 TTGLRTIDAKLLDVHIADADSNRYYAEMPLVLPESFWCFDPMQEA-PIDPTPPAERNGFP 325
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC----KPFCCDSVRHRFLSTLEQLGL 414
TF N+AKI + L+ WA IL VP RL+++ P DS+R R L + G+
Sbjct: 326 TFACIGNIAKIADRTLKSWAEILRRVPTGRLLLRSISFNDPAAVDSMRDR----LGKFGI 381
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
RVD D +Y+ +D+ LDT+P+ G TT+C + YMGVP V++AG
Sbjct: 382 AIERVDFRGPA-GGDDFFASYNEVDLVLDTYPFNGGTTSCFAAYMGVPIVSLAGKSLISR 440
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
+G S+L + L + +E YV+ A+ A+D++ LA R R+ S++ + +G+ FA
Sbjct: 441 MGRSILNNLDLSDWVVADETSYVERAVAGAADLSFLARFRAEARERFSRTALGNGRLFAE 500
Query: 535 GLEST 539
E +
Sbjct: 501 QFERS 505
>gi|238927670|ref|ZP_04659430.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531]
gi|238884386|gb|EEQ48024.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531]
Length = 946
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 196/364 (53%), Gaps = 13/364 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YF+ L +D + V VYS + K+D T F+ V + WRD
Sbjct: 544 IGYISGDFRQHVMQYFVWPFLAGYDASAFDVYVYS-LGKSDQYTDFFKTLVTR----WRD 598
Query: 248 I--YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ + D +++A + D++DIL +L GHTA L +A +PAPVQ++ +GY TTGL T
Sbjct: 599 LSAHERDMERIAQEIHADEVDILFDLAGHTAGTGLAALAWKPAPVQLSGLGYMATTGLRT 658
Query: 306 IDYRITDSLADPPETKQK--HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DP + + +VE+L+RL F CY TPA G+I F SF
Sbjct: 659 VDYFVTDHCCDPEGSGSEAFYVEKLLRLTSQF-CYNGYTHLPASTGTPARGRGYIQFASF 717
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N K VL+ W I+ VP +RL++K + V L+QLG + RV
Sbjct: 718 NQYQKFRDPVLRAWQEIMERVPQARLLLKNNAYSRPGVVQSAYERLQQLGFDMNRVQFEQ 777
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
+ D+M Y +DI+LDTFP+ G TTC++LYMGVP ++ H+ S+L +
Sbjct: 778 A---SRDYMNRYLDVDIALDTFPWPGGGTTCDALYMGVPVISYYTERHSTRFTYSILANI 834
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L + + +YV+ A+ LA ++ L L LRD M SPV D + +E YR +
Sbjct: 835 GLSDLASTSLSDYVETAVALAGNLDLLDALHRELRDRMKASPVMDQAGYIREMEECYRAI 894
Query: 544 WHRY 547
W ++
Sbjct: 895 WAKW 898
>gi|40063717|gb|AAR38498.1| TPR repeat protein [uncultured marine bacterium 583]
Length = 733
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/589 (28%), Positives = 278/589 (47%), Gaps = 50/589 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A ++ + D A+ YE NP AEA NNLG + KD LD AV+CY+ L+I
Sbjct: 150 NLGNALKDLNQLDAAVKSYEKTLAINPDYAEAHNNLGNVLKDLGQLDAAVKCYEKTLAIN 209
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ NNLG V ++DAA + EKA+A NP +AEAY+N G + +D + A+ +
Sbjct: 210 PDYAEAHNNLGNVLQDIDQLDAAVKCYEKALAINPDFAEAYSNRGNVLKDLNRLDEALVS 269
Query: 123 YEQCL----KIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWD- 177
YE + ID + ++ + + H + G++ + ++ D
Sbjct: 270 YESAIAIKPDIDFILGDLLHTKMHLCIWDDLAHRLHELTEKINNGEKALDPFALLALIDD 329
Query: 178 ------------NTKDPE-------------RPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
N K P+ + + IGY S D+ H + + HD
Sbjct: 330 PEVQKKTAEIYANEKYPQSHVLSKIGRYPKHKKIRIGYFSADFHNHPTMHLMAELFECHD 389
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
++++ +S K ++R++V + D+ +++++ + R+ +IDI V L
Sbjct: 390 KDCFELIAFSF---GPDKQDQWRKRVFLCFDQFVDVRLKSDREISLLARKMEIDIAVNLG 446
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G+T +++ G+ A AP+QV+++GYP T +DY I D P E + + E+++ +P
Sbjct: 447 GYTQDSRTGIFAMSAAPIQVSYLGYPGTMAADYMDYLIADHTLIPEEKQHHYSEKIVYMP 506
Query: 333 ECFLCYTPSPEAGPVCPTPAL-------TNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
Y + V T L GFI F FNN KITP W RIL AV
Sbjct: 507 NS---YQVNVSKRSVSETSLLRYELGLPNTGFI-FCCFNNSYKITPSTFTGWMRILKAVE 562
Query: 386 NSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
+S L + + +++ + + G+ R+ + + DH+ D+ +DT
Sbjct: 563 DSVLWLFENNNNTAKNLKKEAI----KFGINEDRL-VFAKYMPVEDHLNRIKQADLFIDT 617
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
PY TT ++L MG+P +T GS A V SLL V L LI +++Y A++LA
Sbjct: 618 LPYNAHTTASDALRMGIPVLTCIGSSFASRVAASLLNAVNLPELITTTQEQYESFAIELA 677
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ L ++ L D + +P+ D F LES Y M+ +Y +G P
Sbjct: 678 TKPEKLKIIKDKLVDNLPTAPLHDTLLFTRHLESAYLTMYEKYQQGLDP 726
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 85/138 (61%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ E+ + D A+ YE A P AEA NNLG+ K+ LD AV+CY+ AL+I
Sbjct: 81 YNLGLTLQELGRLDAAVKSYEQALDIQPDYAEAHNNLGITLKELGQLDAAVQCYEKALAI 140
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+++++ NNLG ++DAA + EK +A NP YAEA+NNLG + +D G + A+
Sbjct: 141 NPDYAEAHNNLGNALKDLNQLDAAVKSYEKTLAINPDYAEAHNNLGNVLKDLGQLDAAVK 200
Query: 122 AYEQCLKIDPDSRNAGQN 139
YE+ L I+PD A N
Sbjct: 201 CYEKTLAINPDYAEAHNN 218
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ E+ + D A+ YE A NP AEA NNLG KD + LD AV+ Y+ L+I
Sbjct: 116 NLGITLKELGQLDAAVQCYEKALAINPDYAEAHNNLGNALKDLNQLDAAVKSYEKTLAIN 175
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ NNLG V G++DAA + EK +A NP YAEA+NNLG + +D + A+
Sbjct: 176 PDYAEAHNNLGNVLKDLGQLDAAVKCYEKTLAINPDYAEAHNNLGNVLQDIDQLDAAVKC 235
Query: 123 YEQCLKIDPDSRNAGQNR---LLAMNYINEG 150
YE+ L I+PD A NR L +N ++E
Sbjct: 236 YEKALAINPDFAEAYSNRGNVLKDLNRLDEA 266
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 84/140 (60%), Gaps = 1/140 (0%)
Query: 1 MYNL-GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL 59
++N+ GV Y + + D A+ +E A P E NLG+ ++ LD AV+ Y+ AL
Sbjct: 45 LFNISGVCYKAVGELDEAVKSFEKALAIKPDYTEVNYNLGLTLQELGRLDAAVKSYEQAL 104
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
I+P+++++ NNLG+ G++DAA + EKA+A NP YAEA+NNLG +D + A
Sbjct: 105 DIQPDYAEAHNNLGITLKELGQLDAAVQCYEKALAINPDYAEAHNNLGNALKDLNQLDAA 164
Query: 120 IDAYEQCLKIDPDSRNAGQN 139
+ +YE+ L I+PD A N
Sbjct: 165 VKSYEKTLAINPDYAEAHNN 184
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 69/111 (62%)
Query: 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98
GV YK LD+AV+ ++ AL+IKP++++ NLG+ G++DAA + E+A+ P
Sbjct: 50 GVCYKAVGELDEAVKSFEKALAIKPDYTEVNYNLGLTLQELGRLDAAVKSYEQALDIQPD 109
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
YAEA+NNLG+ ++ G + A+ YE+ L I+PD A N A+ +N+
Sbjct: 110 YAEAHNNLGITLKELGQLDAAVQCYEKALAINPDYAEAHNNLGNALKDLNQ 160
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 48 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
+ +A++ + + PN N GV Y G++D A + EKA+A P Y E NLG
Sbjct: 25 IQEALDAVEALTTDYPNEPLLFNISGVCYKAVGELDEAVKSFEKALAIKPDYTEVNYNLG 84
Query: 108 VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ ++ G + A+ +YEQ L I PD A N
Sbjct: 85 LTLQELGRLDAAVKSYEQALDIQPDYAEAHNN 116
>gi|427406426|ref|ZP_18896631.1| hypothetical protein HMPREF9161_00991 [Selenomonas sp. F0473]
gi|425708245|gb|EKU71285.1| hypothetical protein HMPREF9161_00991 [Selenomonas sp. F0473]
Length = 498
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 213/410 (51%), Gaps = 12/410 (2%)
Query: 139 NRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTH 198
N L+ ++Y + D ++ E H R++ + + K + IGYVSP H
Sbjct: 95 NYLMTLHYTADISDAEMREEH----GACARIFGGVPQFSHGKRRREKIRIGYVSPSLSEH 150
Query: 199 SVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
V F +D+ + V +Y V + + M G +R + G + AA
Sbjct: 151 VVLNFAVQLFSGYDHARFAVYLYD-VGRGRGDEVTDWLAGMVDG--YRSLGGKPPAEAAA 207
Query: 259 MVREDKIDILVELTGHTANNK-LGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
+ D+IDIL +L GHTA + L + AC+PAPVQV+ IGY +TTGLP +DY + D + DP
Sbjct: 208 AIYADEIDILFDLAGHTAGGRTLRIAACRPAPVQVSGIGYFDTTGLPAMDYVLGDPVCDP 267
Query: 318 PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
P + E+++RLP LC+TP P + + FGSFNN +KIT + L++W
Sbjct: 268 PGMEALFFEKILRLPRTHLCFTPPERFAPYENIVRRAHAPVVFGSFNNFSKITDETLRLW 327
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
A IL VP++RL++K + V R + GL S R++L P D+++ Y
Sbjct: 328 AEILRRVPDARLLLKNVNSNMEPV-ERMRRRAARAGLSSERIELRPG---TRDYLRDYLD 383
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
DI LDT+PY G TTCE+L+MG+P VT AG+ H G+ +L GL L A YV
Sbjct: 384 ADIILDTYPYQGGGTTCEALFMGLPVVTRAGTRHGARFGMGILQNAGLGELAADTPASYV 443
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
+ A+ LA D LA L + + +M SP+ DG + +E Y +W RY
Sbjct: 444 ERAVLLARDGELLAALHGAAQRMMRASPMMDGARYVRDMEEAYETIWERY 493
>gi|427717067|ref|YP_007065061.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
gi|427349503|gb|AFY32227.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
Length = 1269
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/588 (27%), Positives = 259/588 (44%), Gaps = 50/588 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y + A + A P A NLG + ++KA+ C AL +
Sbjct: 690 NLGRLYANQQSWLEAKQCLQQAVRLQPESVAAYYNLGNVLGQIGQIEKAIACLHHALKHQ 749
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + ++LG ++ QG MD A ++ + P Y + + NLG + + G ++ A++
Sbjct: 750 PDFVDTWHSLGCLWMAQGDMDKAQTCFQQVVTLQPDYPQVHGNLGYVLQVQGQLTAALEN 809
Query: 123 YEQCLKIDPDSRNAG-QNRLLAMNYIN-EGHDDKL------FEAH--------------- 159
Y L+++PD+ N Q L ++ + E +D +L + H
Sbjct: 810 YNHALELNPDATNIFYQREHLRLSLCDWEDYDQRLQTLQQRLQTHLQDDNAHPLLPLIIH 869
Query: 160 -------------RDWGKRF---MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
R W +R ++ Y ++ P L +GY+S D+ H+V
Sbjct: 870 SFPVPMDFHKAIARHWARRVAKSIQPYKHLCAFTPPPAPAPKLRLGYISADFRQHAVGTL 929
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
I YHD +++ YS V +D F EK+ + D+ + AA + D
Sbjct: 930 IHQIFAYHDRSAFEIYAYSLVDASD----EFTEKIQAGCDQFVDLSRLSTPAAAARIHRD 985
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
I IL++L G+T ++ ++A QPAP+Q+ ++GYP T G I Y + DS P E
Sbjct: 986 GIHILIDLAGYTTFSRPEILALQPAPIQIQYLGYPGTMGAEFIQYILADSWLIPAELAPH 1045
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILC 382
+ E+L+ LP F+ + + P+ L F FN K P+V W RIL
Sbjct: 1046 YSEKLLELPHAFVASSITITDQPLTRADFGLPTDAFVFCCFNRSDKFDPEVFASWMRILQ 1105
Query: 383 AVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
VPNS L +++ P V + +Q G+ R+ P + L +++ AY L D+
Sbjct: 1106 QVPNSVLWLIETTP----DVSYTLRDMAQQQGIAPTRLVFTPRLPLA-EYLAAYRLADLF 1160
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTF Y T +L+ G+P +T G +G S+ GL LI + Y Q A+
Sbjct: 1161 LDTFVYNAGATGIHALFAGLPLITRPGKAFVARMGASICAAAGLDLLICDSSAAYEQKAV 1220
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
LA+ LA +R+ LR P+ Q + LE+ +W + K
Sbjct: 1221 HLATHPDELAKIRLILRLHHDDLPLFQPQQWITHLETALWQIWGKTQK 1268
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 2 YN-LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YN LG A + + + AI Y+ NP+ A+A NLG I++ + +A+ YQ A+
Sbjct: 620 YNQLGNALQGLGQIEGAIAAYQKLLTINPNVAQAHCNLGSIWQMQGKTQEAIAAYQRAIQ 679
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PNF+ + NLG +Y Q A + +++A+ P AY NLG + G I AI
Sbjct: 680 LQPNFAVAYLNLGRLYANQQSWLEAKQCLQQAVRLQPESVAAYYNLGNVLGQIGQIEKAI 739
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
LK PD + + L ++ +G DK
Sbjct: 740 ACLHHALKHQPDFVDTWHS--LGCLWMAQGDMDK 771
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ G + + A+ + A P A N LG + ++ A+ YQ L+I
Sbjct: 587 FEQGKQLAQQGELKAAVASFTKAIRLQPDYIAAYNQLGNALQGLGQIEGAIAAYQKLLTI 646
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PN +Q+ NLG ++ +QGK A ++AI P +A AY NLG LY + S A
Sbjct: 647 NPNVAQAHCNLGSIWQMQGKTQEAIAAYQRAIQLQPNFAVAYLNLGRLYANQQSWLEAKQ 706
Query: 122 AYEQCLKIDPDSRNAGQN 139
+Q +++ P+S A N
Sbjct: 707 CLQQAVRLQPESVAAYYN 724
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 45 RDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYN 104
+ L AV + A+ ++P++ + N LG G+++ A +K + NP A+A+
Sbjct: 596 QGELKAAVASFTKAIRLQPDYIAAYNQLGNALQGLGQIEGAIAAYQKLLTINPNVAQAHC 655
Query: 105 NLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW 162
NLG +++ G AI AY++ +++ P+ A+ Y+N G +L+ + W
Sbjct: 656 NLGSIWQMQGKTQEAIAAYQRAIQLQPN---------FAVAYLNLG---RLYANQQSW 701
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 32 AEACNNLGVIYKDR-----------------------DNLDKAVECYQMALSIKPNFS-Q 67
AE C+ + V+Y+ + D L+++++ ++ + N S +
Sbjct: 525 AEGCSQIRVVYQPKESSAMALTPLLQRLGWQKLIAGTDGLERSLKLLTVSPPVDGNESAR 584
Query: 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCL 127
S G QG++ AA KAI P Y AYN LG + G I AI AY++ L
Sbjct: 585 SQFEQGKQLAQQGELKAAVASFTKAIRLQPDYIAAYNQLGNALQGLGQIEGAIAAYQKLL 644
Query: 128 KIDPDSRNAGQN 139
I+P+ A N
Sbjct: 645 TINPNVAQAHCN 656
>gi|27379561|ref|NP_771090.1| hypothetical protein blr4450 [Bradyrhizobium japonicum USDA 110]
gi|27352713|dbj|BAC49715.1| blr4450 [Bradyrhizobium japonicum USDA 110]
Length = 720
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/584 (26%), Positives = 277/584 (47%), Gaps = 49/584 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A + +F+ A V ++ A F P AEA ++ + + + A ++ +L++K
Sbjct: 138 NRGMAELMIGQFERAGVDFDRALSFQPRHAEAIAGKAMVSLELRHFEAAEAAFEASLALK 197
Query: 63 PNFSQSL-----------------------------NNLGVVYTVQGKM---DAAAEM-- 88
P + L N L + + Q + + A M
Sbjct: 198 PGSPRILVQRGRLHLTLYRLEQAAADFDAALAQSPRNELALCWRAQVDIMVRNTAGAMAG 257
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
++ + NP + L + + G I+ A++ + L I PD A ++ ++Y+
Sbjct: 258 VKTLLEVNPQSEAGMSLLASCHANQGDIATALEYLDAALAIAPDFPEAIGYKIFVLDYLP 317
Query: 149 EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
E A + W + Q T DP+R +VIGYV+ ++ HS +Y + +
Sbjct: 318 EADFVVQQAARKYWWDQIGAKLPQRTLSPRDLDPDRRIVIGYVASEFRQHSAAYTLLPVM 377
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+HD+ +K+V YS D T EK +W + + ++A ++ D IDIL
Sbjct: 378 RHHDHAKFKIVCYSCWPLQDGMT----EKFKACADVWVEAAQFSDDELADRIQADGIDIL 433
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
++++GHT ++L + + +PAP+QVT G+ TGL T+DY + D + P + E++
Sbjct: 434 IDVSGHTTGSRLHVFSRKPAPIQVTGFGHATGTGLQTMDYVLADPIFIPQSARHLLAEKV 493
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
LP + P + P P L NG++TFG FN + KI+ + ++VW++++ V S+
Sbjct: 494 YDLPS-LITIDPIQDV-PPSELPMLRNGYVTFGVFNRILKISDEAIRVWSKVMREVAGSK 551
Query: 389 LVVKC----KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
+++K P D + RF++ G+ V + +H++A++ +DISLDT
Sbjct: 552 IIIKNGLLDDPMLRDGLIARFVAQ----GIAEENVICMGSTS-RREHLRAFANVDISLDT 606
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
FP G +T ESLY GVP V G+ + G S++ VGL +A +++ Y +A + A
Sbjct: 607 FPQNGGISTWESLYAGVPVVAKLGNGSSSRAGGSIVAAVGLGDWVADDDEGYAAIACKFA 666
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+ LA LR L ++ SP + + + +E+ YR W YC
Sbjct: 667 AQPAHLAKLRADLPAQIANSPAGNVEIYTREVEAGYRQFWRDYC 710
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A E A +P +A NLG +Y + A C + A+++KPN +L NLG
Sbjct: 50 AQFLLERAVALDPRSPDAHGNLGAVYFALERFKDARACQEKAIALKPNCPITLTNLGNTL 109
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G A E+ E+AI P YA+A+ N G+ G A +++ L P
Sbjct: 110 LHLGLAKEAIELHERAIRLKPNYADAFCNRGMAELMIGQFERAGVDFDRALSFQP 164
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y + +F A E A P+C NLG +A+E ++ A+ +K
Sbjct: 70 NLGAVYFALERFKDARACQEKAIALKPNCPITLTNLGNTLLHLGLAKEAIELHERAIRLK 129
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA 102
PN++ + N G+ + G+ + A ++A++ P +AEA
Sbjct: 130 PNYADAFCNRGMAELMIGQFERAGVDFDRALSFQPRHAEA 169
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV 78
+ E+ HF+ A + LG+ D L+ A + A+++ P + NLG VY
Sbjct: 23 ILKEVPDHFH-----ATHLLGLRAFDGGWLEDAQFLLERAVALDPRSPDAHGNLGAVYFA 77
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
+ A EKAIA P NLG G AI+ +E+ +++ P+ +A
Sbjct: 78 LERFKDARACQEKAIALKPNCPITLTNLGNTLLHLGLAKEAIELHERAIRLKPNYADAFC 137
Query: 139 NRLLAMNYINE 149
NR +A I +
Sbjct: 138 NRGMAELMIGQ 148
>gi|238927669|ref|ZP_04659429.1| possible tetratricopeptide TPR_2 repeat protein [Selenomonas
flueggei ATCC 43531]
gi|238884385|gb|EEQ48023.1| possible tetratricopeptide TPR_2 repeat protein [Selenomonas
flueggei ATCC 43531]
Length = 458
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/419 (34%), Positives = 215/419 (51%), Gaps = 19/419 (4%)
Query: 132 DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYV 191
D A N L+ ++Y + D+ + +AH + K + + +T L IGY+
Sbjct: 49 DRLAALSNYLMYLHYADGVTDEMMCDAHAAYAK----MLGSLPLFSHTVRKHGKLRIGYL 104
Query: 192 SPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI--WRDIY 249
SP+ H V F ++ Y+V +Y D T++ G + + D+
Sbjct: 105 SPNLTDHIVLNFAIQLFSAYNRSRYEVRLY------DIGTLQCETTDWVAGMVDGYTDLS 158
Query: 250 GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMAC-QPAPVQVTWIGYPNTTGLPTIDY 308
++ AA + D+IDIL +L GH+A K M+A +PAPVQ++ IGY NTTGL +DY
Sbjct: 159 KCCPQEAAARIHADEIDILFDLAGHSAGGKTLMIAAHKPAPVQLSGIGYFNTTGLSAMDY 218
Query: 309 RITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAK 368
+ D DPP + E+++RLP+ LC+TPS P + + F SFNN AK
Sbjct: 219 FLGDPFCDPPGEEVHFTEQILRLPQTHLCFTPSERFRPYEHLQRTPHENVVFASFNNFAK 278
Query: 369 ITPKVLQVWARILCAVPNSRLVVK-CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
IT +L W IL AVP +RL++K P R Q G++ R++L P
Sbjct: 279 ITDAMLTAWGEILRAVPMARLLLKNVHPL--KETLTRMKKRAVQAGIDPARLELRPG--- 333
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH 487
+ D++ Y D+ LDTFPY G TTCE+L MG+P V AG+ H GVSLL GL
Sbjct: 334 SKDYLADYLDADVILDTFPYQGGGTTCEALCMGLPVVVRAGTRHGARFGVSLLHNAGLSE 393
Query: 488 LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
LIA + +EY++ A+ LA D T L L+ ++ +M SP+ +G + +E Y +W R
Sbjct: 394 LIAGSTEEYIERAVLLARDRTLLGALQTAIPRMMRASPLMNGMGYVRAMEDAYEMIWER 452
>gi|402302468|ref|ZP_10821580.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC9]
gi|400380535|gb|EJP33352.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC9]
Length = 916
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 198/364 (54%), Gaps = 13/364 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YFI L D +++V YS + + D T F+ V WRD
Sbjct: 555 IGYISGDFREHVMQYFIWPFLAGFDRDDFEVYCYS-LGRTDQYTEFFKTLVTA----WRD 609
Query: 248 I--YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ +K+AA + D++DIL +L GHTA + L +A +PAPVQ++ +GY TTGL
Sbjct: 610 VSKQANAPEKIAARIYADEVDILFDLAGHTARSGLPALAWKPAPVQLSGLGYMATTGLSA 669
Query: 306 IDYRITDSLADPPET--KQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DPP + VE+L+RL F CY + PA G++ F SF
Sbjct: 670 VDYFVTDRYCDPPGSVGDAYFVEKLLRLTSQF-CYNGYTQLPVSEGAPARRRGYVQFASF 728
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N K+T ++L+VWA IL +P +RL++K + V ++++GL+ RV
Sbjct: 729 NQYLKMTDEMLRVWAEILRRLPTARLLLKNSAYEKKGVVRAAHERMKRVGLDMSRVQFER 788
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
D+M Y +DI+LDTFP+ G TTC++LYMGVP V+ H+ SLL +
Sbjct: 789 A---TRDYMLRYLDVDIALDTFPWPGGGTTCDALYMGVPVVSYYTERHSTRFTYSLLANI 845
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L ++ +YV+ A+ LA +V L L LRD M SPV D + +E YR++
Sbjct: 846 GLSDLASETLSDYVETAVMLAENVDLLDALHRELRDRMKNSPVMDQVGYIREMEGCYRDI 905
Query: 544 WHRY 547
W RY
Sbjct: 906 WARY 909
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 146/368 (39%), Gaps = 39/368 (10%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
+ +D E+ + +GY+S + + F+ A L + +++ Y + D T F E
Sbjct: 16 HRRDTEKKIRVGYLSDSFGGGAERDFLPALLALANPLRFELYAYHTGAEGD--TAPFAES 73
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
+R + ++ A ++R D++D+LV+L+ T+ P ++ +
Sbjct: 74 ----AAAFRTLGACTAQEAAEIIRGDELDLLVDLSFDTS----------PVFIREIFAER 119
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP-SPEAGPVCPTPALTNG 356
P L + +DP E + + CYTP TP L
Sbjct: 120 PARRLLSLAE-------SDPAEGAETLLTVDGETDFVPFCYTPIERREAYAYRTPMLDGA 172
Query: 357 FITFGSFNNLAK-ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
+ G + + +++ + +L + + RL++ P V L+ + +
Sbjct: 173 PASVGLIGRADEGLREEIVTLLCALLARISHVRLIL---PVSIGGV----LTDADFALIS 225
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
D+ LIL++ A +DI++ +A C ++ VP +T AG V +
Sbjct: 226 ETGSDVAELILVDE---VADEELDIAIGI--HADPAQICRTVESSVPILTAAGVVGKYAA 280
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
G+ L GL I + + Q A L DV L++L +LR SP+ DG +
Sbjct: 281 GI--LRAAGLGDEIVADAETLAQRAASLLRDVERLSHLHETLRWQFRDSPISDGAAYLFT 338
Query: 536 LESTYRNM 543
+E Y +
Sbjct: 339 MERAYDRL 346
>gi|160896054|ref|YP_001561636.1| hypothetical protein Daci_0605 [Delftia acidovorans SPH-1]
gi|160361638|gb|ABX33251.1| Tetratricopeptide domain protein [Delftia acidovorans SPH-1]
Length = 553
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 168/538 (31%), Positives = 258/538 (47%), Gaps = 29/538 (5%)
Query: 44 DRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY 103
DR +A+ ++ P S+ ++G VY A E ++ A+ P A
Sbjct: 31 DRAQFLEALSDLAQLVARDPRNSKVWLHIGFVYVRMSIWPQAMEALQMALEIEPRMPNAQ 90
Query: 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN--YINEGHDD---KLFEA 158
L + G E C ID R+A M YI+ K E
Sbjct: 91 RLLALALFSTGR------RQEACDLIDDACRHAKNENTHWMTRAYIHSHTSSDPLKSLEV 144
Query: 159 HRDWGKRF----MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
RDWG+RF R + D ++P + L +GYV+ D+ HSV++F+ L +H+
Sbjct: 145 ARDWGRRFADPLTRNAKPFPPRD--RNPRKKLKVGYVTADFRQHSVAFFMRPVLEHHNPD 202
Query: 215 NYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGH 274
N ++ VYS+ + D T + R V W D + ++ +R D ID+LV+L+G
Sbjct: 203 NVEIHVYSSG-RPDKMTEKLRALVPH----WHDAVEQTDDQLYEQIRTDGIDVLVDLSGF 257
Query: 275 TANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPEC 334
T ++L + A + APVQVTW+GY +T G+ +DYR+ D PP + E+L ++ C
Sbjct: 258 TLGHRLEVFARRAAPVQVTWLGYMHTLGMKAMDYRLVDPSIAPPAHAPYYSEKLFQM-HC 316
Query: 335 FLCYTPSPEAGPVCPTPA-LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC 393
Y+P PE P+C P L NG+ T S NN AK+T ++L VW+RIL A ++RL++
Sbjct: 317 MASYSP-PEYSPLCEEPPMLRNGYPTLISLNNSAKLTDEMLTVWSRILHARQDARLIIMV 375
Query: 394 KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTT 453
K DS + +E+ G+ RV +L L+ M+ + DI+LDT P +G TTT
Sbjct: 376 KEHDPDSAQAHMQPRVEKAGMPMDRVSVLHQQPLD-SFMELGHIADIALDTLPISGGTTT 434
Query: 454 CESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANL 513
+L+MG+ VTM L +G IAKN D+YVQ+ L L LA+
Sbjct: 435 LHALWMGLQIVTMDAVRGVDASTSRTLRGLGFDGGIAKNIDDYVQIVLHLMKSPDTLASQ 494
Query: 514 RMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSL---KRMEMLQQQVVSE 568
R R + S + + L+ +YR MW + + D L K +E L +++ SE
Sbjct: 495 RREARARLESSFLMNYPERTAELDKSYRLMWINWLREDCQILDAGKDLEQLLKKMDSE 552
>gi|304438235|ref|ZP_07398177.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368842|gb|EFM22525.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 946
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 193/364 (53%), Gaps = 13/364 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YFI L +D ++V VYS + ++D T F+ V + WRD
Sbjct: 544 IGYISGDFRQHVMQYFIWPFLAGYDADTFEVYVYS-LGQSDQYTDFFKTLVTR----WRD 598
Query: 248 I--YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ Y D + +A + D++DIL +L GHTA L +A +PAPVQ++ +GY TTGLP
Sbjct: 599 LSEYAQDMECIAREIHADEVDILFDLAGHTAGTGLAALAWKPAPVQLSGLGYMATTGLPA 658
Query: 306 IDYRITDSLADPPETKQK--HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DP + + +VE+L+RL F CY TPA G+I F SF
Sbjct: 659 VDYFVTDHYCDPEGSGSEAFYVEKLLRLTSQF-CYNGYTHLPASTGTPARGRGYIQFASF 717
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N K +L+ W I+ VP SRL++K + V L++LG + RV
Sbjct: 718 NQYQKFYDPMLRAWQEIMERVPQSRLLLKNNAYAKPGVVQSAYERLQRLGFDMSRVQFE- 776
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
D+M Y +DI+LDTFP+ G TTC++LYMGVP V+ H+ S+L +
Sbjct: 777 --CATKDYMWRYLDVDIALDTFPWPGGGTTCDALYMGVPVVSYYTERHSTRFTYSILANI 834
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L + +YV+ A+ LA ++ L L LRD M SPV D + +E Y +
Sbjct: 835 GLSDLASTRLSDYVETAVALAGNLDLLDALHRELRDRMKASPVMDQAGYIREMEECYHAI 894
Query: 544 WHRY 547
W ++
Sbjct: 895 WAKW 898
>gi|390960058|ref|YP_006423815.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Terriglobus roseus DSM 18391]
gi|390414976|gb|AFL90480.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Terriglobus roseus DSM 18391]
Length = 598
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 258/557 (46%), Gaps = 14/557 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YNLGV E A + A +P NLG I L A YQ A+
Sbjct: 49 FYNLGVTMIESGNLAEAERWLRHALAIDPAHGLTHLNLGNILNANGQLQAAEMHYQCAML 108
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++ LNN G + + A +AI + + NL L G ++ A
Sbjct: 109 SIAGDARLLNNYGQLLNKLHRFSEAEAYFREAIRRDECFPHPCANLAELMAGHGLVTEAE 168
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNT 179
L +D A N L + ++ +KL H + +F + L + N+
Sbjct: 169 TLLRHALSLDVGLAKAHSNLLFVLALRDDCSAEKLLAEHLAYAAQFEVPLKPCWPQHANS 228
Query: 180 KDPERPLVIGYVSPDYFTHSVS-YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
+DPER L +G+VS D H V+ Y + A Y ++ YS VK DA+T ++R
Sbjct: 229 RDPERRLRVGFVSGDLRDHPVARYLMPALQQLVRYDELELYAYSNGVKNDAQTAQYRALF 288
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
W+D + ++ +A + D IDIL++L+GH+ +N+L A +PAPVQV+W+GY
Sbjct: 289 TH----WQDSALVPDEALARRIIADGIDILIDLSGHSGDNRLLTFARRPAPVQVSWMGYV 344
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPEC--FLCYTPSPEAGPVCPTPALTNG 356
TTGL +DY + D P + E+++ LP F + P+ E + PAL +G
Sbjct: 345 GTTGLEAMDYFVGDEHLTPASVHAQFREKILLLPATTTFEPFAPAIEPNAL---PALASG 401
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
TF + K+ + +WAR+L P SR+++ P + R + +G E
Sbjct: 402 VFTFCCVARINKLNRPHVALWARMLQCAPASRMLLATLPGGAEPERVKAWFAEAGVGAEQ 461
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
L + + ++ + + D+ LDTFPY G TT +L +GVP +T+ G+V +G
Sbjct: 462 L---IFAHARTVEEQLRLHHMADLCLDTFPYNGATTISHALCLGVPTLTLRGAVLGSRLG 518
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
S+ + VG+ IA++ + YV+ A+ D+ ALA LR L + + S + ++ A L
Sbjct: 519 ASINSHVGITEFIAEDGEAYVRKAVAWTQDLPALARLRGELPSMFAASALRQHEDVADAL 578
Query: 537 ESTYRNMWHRYCKGDVP 553
R W R+C+G P
Sbjct: 579 VLKLRVAWRRWCEGLPP 595
>gi|313201112|ref|YP_004039770.1| hypothetical protein MPQ_1373 [Methylovorus sp. MP688]
gi|312440428|gb|ADQ84534.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688]
Length = 697
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 168/598 (28%), Positives = 271/598 (45%), Gaps = 70/598 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIY-------KDRDNLDKAVECY 55
NLG Y E+ +F A Y +P AE + LG +D +A CY
Sbjct: 110 NLGNLYQELGRFQDAAACYRRVLRVHPGEAEVRDALGHSLLGWGNACQDAGRYAEAERCY 169
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+ AL++ PN + NLG GK AA ++AIA +P A+A+NNLG R+ G
Sbjct: 170 EEALTLAPNDAALHFNLGNARRELGKTAQAAASYQRAIALSPDDADAHNNLGNALRELGQ 229
Query: 116 ISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH----RDW--------- 162
+ AI Y++ L + PD +A R+ ++ D + E R W
Sbjct: 230 LPEAIACYQRALALKPDLYHA---RIHLIHQQQHAADWRGLEQQIDEVRGWLHSAPTAQI 286
Query: 163 ------------------------GKRFMRLYSQYT--SWDNTKDPERPLVIGYVSPDYF 196
R+ L +Q + ++ + + PL +GY+S D+
Sbjct: 287 SPFAFLAMPGTTAAEQRLCAERWLENRYASLTAQASELAFTHIRHENTPLRVGYLSADFR 346
Query: 197 THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKV 256
H ++ + L HD +V YS V + R+++ + DI +
Sbjct: 347 RHPLAALVTELLELHDRDQLEVFAYSYGVDDSSPE---RQRLQHAVDHFVDIRALSLVDA 403
Query: 257 AAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG----LPTIDYRITD 312
A + D IDILV+LTG T +++ G++A +PAP+ + W+G+P + G P DY ++D
Sbjct: 404 AKRIHADGIDILVDLTGFTQSSRTGIVALRPAPISINWLGFPGSMGSLHGKPLFDYVLSD 463
Query: 313 SLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFITFGSFNNLA 367
+ P ++ + E L+ LP Y P+ P+ TPA L + FN
Sbjct: 464 AYITPAASQPDYAERLLLLPGS---YQPNDRNRPIGKTPARVDYGLPEEAFVYCCFNQSF 520
Query: 368 KITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLIL 426
KITP V W RIL VP+S L +++ +++ + G++ R+ P +
Sbjct: 521 KITPTVFACWMRILQQVPDSVLWLLESNATATANLQQ----AAKTAGIDPARLVFAPRVA 576
Query: 427 LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLK 486
+ DH+ ++L D+ LDT PY TT ++L+M +P +T +G A V SLL V L
Sbjct: 577 MA-DHLARHALADLFLDTLPYNAHTTASDALWMCLPVLTCSGDTFASRVAGSLLHAVNLP 635
Query: 487 HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
LIA + Y +A+ L D L LR L+ + P+ D ++FA LE+ Y+++W
Sbjct: 636 ELIAPDMAAYEAMAISLRHDAATLEGLRERLQQASADLPLFDTRHFARKLEAVYQDIW 693
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+F A + Y P A+ + LG++ + +A E A++++P + L N
Sbjct: 18 RFQQAELLYRQLLQHAPRHADGLHMLGILCYQTERAAEAAELIAQAVALEPRNADMLINH 77
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+ GK A + E+A+ P NNLG LY++ G A Y + L++ P
Sbjct: 78 GLTLRAAGKRQEALKSYERAMLLTPKDLVLQNNLGNLYQELGRFQDAAACYRRVLRVHP 136
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 7/146 (4%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G+ K A+ YE A P NNLG +Y++ A CY+ L
Sbjct: 74 LINHGLTLRAAGKRQEALKSYERAMLLTPKDLVLQNNLGNLYQELGRFQDAAACYRRVLR 133
Query: 61 IKPN-------FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
+ P SL G G+ A E+A+ P A + NLG R+
Sbjct: 134 VHPGEAEVRDALGHSLLGWGNACQDAGRYAEAERCYEEALTLAPNDAALHFNLGNARREL 193
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQN 139
G + A +Y++ + + PD +A N
Sbjct: 194 GKTAQAAASYQRAIALSPDDADAHNN 219
>gi|320530498|ref|ZP_08031556.1| conserved domain protein [Selenomonas artemidis F0399]
gi|320137331|gb|EFW29255.1| conserved domain protein [Selenomonas artemidis F0399]
Length = 916
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 198/364 (54%), Gaps = 13/364 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YFI L D +++V YS + + D T F+ V WRD
Sbjct: 555 IGYISGDFREHVMQYFIWPFLAGFDRDDFEVYCYS-LGRTDQYTEFFKTLVTA----WRD 609
Query: 248 I--YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ +K+AA + D++DIL +L GHTA + L +A +PAPVQ++ +GY TTGL
Sbjct: 610 VSKQANAPEKIAARIYADEVDILFDLAGHTARSGLPALAWKPAPVQLSGLGYMATTGLSA 669
Query: 306 IDYRITDSLADPPET--KQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DPP + VE+L+RL F CY + PA G++ F SF
Sbjct: 670 VDYFVTDRYCDPPGSVGDAYFVEKLLRLTSQF-CYNGYTQLPVSEGAPARRRGYVQFASF 728
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N K+T ++L+VWA IL +P +RL++K + V ++++GL+ RV
Sbjct: 729 NQYLKMTDEMLRVWAEILRRLPTARLLLKNSAYEKKGVVRAAHERMKRVGLDMSRVQFER 788
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
D+M Y +DI+LDTFP+ G TTC++LYMGVP V+ H+ S+L +
Sbjct: 789 A---TRDYMLRYLDVDIALDTFPWPGGGTTCDALYMGVPVVSYYTERHSTRFTYSILANI 845
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L ++ +YV+ A+ LA +V L L LRD M SPV D + +E YR++
Sbjct: 846 GLSDLASETLSDYVETAVMLAENVDLLDALHRELRDRMKNSPVMDQVGYIREMEGCYRDI 905
Query: 544 WHRY 547
W RY
Sbjct: 906 WARY 909
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 142/367 (38%), Gaps = 43/367 (11%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
+ +D E+ + +GY+S + + F+ A + ++V Y D T F E
Sbjct: 16 HRRDTEKKIRVGYLSDSFGGGAERDFLPAFFAAANPLRFEVYAYHTGTGGD--TALFAES 73
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
+R + ++ A ++R D+ID+LV+L+ ++ A ++ ++ Y
Sbjct: 74 ----AAAFRTLGACTAQEAAEVIRRDEIDLLVDLSFDASS----------AFIRDVFVRY 119
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
P L + A+ ET E +P LCYTP L +G
Sbjct: 120 PARRLLSLAE----QCPAEGAETLPPVDGETDFVP---LCYTPIERRDSYAYRTPLLDG- 171
Query: 358 ITFGSFNNLAKITPKVLQVWARILCA----VPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
T S + + + +LCA +P RL++ P SV L+ +
Sbjct: 172 -TAPSIGLIGRADEGRREEIVTLLCALLARIPRVRLIL---PVSIGSV----LTDADVAR 223
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ + D LIL++ A +DI++ A C ++ VP +T V +
Sbjct: 224 ISEIGTDTAELILVDE---VADEELDIAIGV--NADPMKICRTVEYSVPILTADAFVGRY 278
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+L GL IA + E A L DV L+ L +LR + SPV + +
Sbjct: 279 --AADILRAAGLGLEIAPDSAELAACAASLLHDVERLSYLHETLRWNLLDSPVSEASAYM 336
Query: 534 LGLESTY 540
+E Y
Sbjct: 337 FTMERAY 343
>gi|430807755|ref|ZP_19434870.1| hypothetical protein D769_15772 [Cupriavidus sp. HMR-1]
gi|429499913|gb|EKZ98309.1| hypothetical protein D769_15772 [Cupriavidus sp. HMR-1]
Length = 745
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 237/484 (48%), Gaps = 41/484 (8%)
Query: 74 VVYTVQ---GKMDAAAE---MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCL 127
V+Y +Q G DAA + K ++ YA A ++ G + A+ A + +
Sbjct: 121 VLYGLQDYPGARDAALRGRALAPKEVSTLTAYANAM-------KETGKVGEAVGALREAI 173
Query: 128 KIDPDSRNAGQNRLLAMNYI-NEGHDDKLFEAHRDW-----GKRFMRLYSQYTSWDNTKD 181
I PD N L M + N D EA R KR R + + DN +
Sbjct: 174 AIAPDQLLLRFNLLFTMLFDENTTGLDLRHEAERCAQLMMPAKRGAR--ALHPPADNGR- 230
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
+ +G +S D +H+ +YF+ L D+ +V VYS AD T EKV
Sbjct: 231 ----IRLGLMSNDLMSHACAYFVIPFLANLDHTRVEVFVYSLNGHADNIT----EKVRYF 282
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
G + ++ G K+V +VR D++D+L +L G+T N L MA A Q+TWIGYP TT
Sbjct: 283 AGHFVELAGKTVKEVVDIVRADQLDVLFDLGGYTRNTPLTYMAHGLAMKQLTWIGYPGTT 342
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP--------SPEAGPVCPTPAL 353
G+P +DYR+T+++ADP + EEL+ P Y P A V PTPAL
Sbjct: 343 GMPGMDYRLTEAMADPEGNEAFCTEELLHAP-AIASYFPLVARPLDAYAAAYRVRPTPAL 401
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
NG ITFG NLAKI+ + L++W+ +L P SRL+V+C D+VR L + G
Sbjct: 402 ENGHITFGCCINLAKISARTLRLWSGVLARCPGSRLLVECSGLDNDAVRVPLLERMAAAG 461
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ + RV +P N + Y +D+ LDT P C++L+MGVP VT+AG
Sbjct: 462 IAAERVICVPREGKNQYVL--YHRIDVLLDTAPLTAGANACDALWMGVPLVTIAGQAFHE 519
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ S L +GL LI +D+Y++ A+ LASDV L LRMS+R S + D
Sbjct: 520 RISASFLNTIGLPGLICTTDDQYIETAVALASDVAQLDALRMSIRTRFEGSALSDAAGLC 579
Query: 534 LGLE 537
LE
Sbjct: 580 RWLE 583
>gi|91775742|ref|YP_545498.1| TPR repeat-containing protein [Methylobacillus flagellatus KT]
gi|91709729|gb|ABE49657.1| TPR repeat [Methylobacillus flagellatus KT]
Length = 700
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/555 (29%), Positives = 268/555 (48%), Gaps = 59/555 (10%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG + + +A + ++ ++++P NLG QG+ AAE +A+A +P
Sbjct: 155 LGNRAQQAGHFAEAEQHFRDLIALQPGNGAWHYNLGNALREQGQAAQAAECYRRALAISP 214
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP-----------------DSRNAGQNR 140
A+A+NNLG + R+ + AI YE+ L I+P D R+ +
Sbjct: 215 DDADAHNNLGNVLRELQQLPEAIACYERALAINPALYHARVHLVHQRQHLCDWRHLDADI 274
Query: 141 LLAMNYINEGHDDKL----------------FEAHRDWG-KRFMRLYSQYTSWDNTKDPE 183
++++ + ++ + R+W R RL S
Sbjct: 275 AEIRRWVSQIPEAQVSPFAFLAMPGTTPAEQLKCARNWTTNRHGRLLSVTPLTQPAPSRA 334
Query: 184 RP-----LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
RP L IGY+S D+ H ++ + L HD +++ + YS D +T R ++
Sbjct: 335 RPQAGDKLHIGYLSCDFRLHPLASLVTEMLELHDREHFTISAYS--YGPDDRT-SARLRL 391
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ + DI + + AA + DK+DILV+LTG+T +++ G++A +PAP+Q +W+G+P
Sbjct: 392 QQAVDHFVDIRPLPLQAAAARIHADKVDILVDLTGYTQSSRSGILAFRPAPIQASWLGFP 451
Query: 299 NTTGLPTIDYRITDSLADPPETKQKH-VEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
T G P +DY I+D++ PET+Q H E+L LP Y P+ PV P+P+ +
Sbjct: 452 GTMGAPFVDYLISDAIIT-PETEQHHYAEQLALLPH---SYQPNDRQRPVAPSPSRASCG 507
Query: 358 I-----TFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQ 411
I + FN KITP+V W R+L A P S L +++ C+++R E
Sbjct: 508 IPEDAFVYCCFNQSFKITPEVFSCWMRLLQATPGSVLWLLEGHSNACNNLR----QAAEH 563
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
G+ + R+ P + ++ H+ ++ D+ LDT PY TT ++L+MGVP +T +G
Sbjct: 564 HGVAASRLVFAPRVPMD-QHLARHAHADLFLDTLPYNAHTTASDALWMGVPLITCSGDAF 622
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A V SLL VGLK L+ + Y LA QLA D L N R L D S + D +
Sbjct: 623 ASRVAASLLQAVGLKELVTTDLFAYETLARQLAHDPEKLRNYRDKLMDARHHSALFDTER 682
Query: 532 FALGLESTYRNMWHR 546
F LE+ Y + HR
Sbjct: 683 FTRDLEALYLRL-HR 696
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%)
Query: 45 RDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYN 104
R L +A + YQ L+I P + L+ GV+ G+ A E+I AI NP A+ +N
Sbjct: 19 RGQLKQAEQHYQELLTIAPRHAVGLHYYGVLCYQSGRPQQAVELISNAIRFNPGNADQHN 78
Query: 105 NLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
NLG+ R G + AI + Q L + P + QN
Sbjct: 79 NLGLALRACGQLDAAIHHFRQGLALAPGDSDLWQN 113
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 58/164 (35%), Gaps = 41/164 (25%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ A FNP A+ NNLG+ + LD A+ ++ L++ P S NLG
Sbjct: 59 AVELISNAIRFNPGNADQHNNLGLALRACGQLDAAIHHFRQGLALAPGDSDLWQNLGAAQ 118
Query: 77 TVQGKMDAAA----EMIEKA-------------------------------------IAA 95
G + AA E ++A IA
Sbjct: 119 HAAGDLAAARTAYLEARQRAPQDTDIQAGLCSVLQALGNRAQQAGHFAEAEQHFRDLIAL 178
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
P + NLG R+ G + A + Y + L I PD +A N
Sbjct: 179 QPGNGAWHYNLGNALREQGQAAQAAECYRRALAISPDDADAHNN 222
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 49/119 (41%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ A Y+ P A + GV+ +AVE A+ P + NNL
Sbjct: 21 QLKQAEQHYQELLTIAPRHAVGLHYYGVLCYQSGRPQQAVELISNAIRFNPGNADQHNNL 80
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+ G++DAA + +A P ++ + NLG AG ++ A AY + + P
Sbjct: 81 GLALRACGQLDAAIHHFRQGLALAPGDSDLWQNLGAAQHAAGDLAAARTAYLEARQRAP 139
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG A E + A Y A +P A+A NNLG + ++ L +A+ CY+ AL+I
Sbjct: 187 YNLGNALREQGQAAQAAECYRRALAISPDDADAHNNLGNVLRELQQLPEAIACYERALAI 246
Query: 62 KP 63
P
Sbjct: 247 NP 248
>gi|242065108|ref|XP_002453843.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
gi|241933674|gb|EES06819.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
Length = 1011
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 165/613 (26%), Positives = 270/613 (44%), Gaps = 73/613 (11%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A FY+ A + NNL VIYK + N A+ CY L
Sbjct: 396 LTNLGNIYMEWSMISAAASFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCYTEVLR 455
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + +L N G + G+++ A + +A P AEA+ NL Y+D+G + AI
Sbjct: 456 IDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNMAEAHANLASAYKDSGHVETAI 515
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKRFMRL---------- 169
+Y+Q L++ PD A N L + + + + D +F + +R +++
Sbjct: 516 VSYKQALRLRPDFPEATCNLLHTLQCVCDWENRDAMFRDVEEIIRRQIKMSVLPSVQPFH 575
Query: 170 -----------------YSQYTSWDNTKDPERPLV-----------------IGYVSPDY 195
Y+ + S ++ P V +GYVS D+
Sbjct: 576 AIAYPIDPMLALEISCKYAAHCSLIASRFGLPPFVHPSPVPVKAEGKHCRLRVGYVSSDF 635
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H +S+ + + HD N +V Y A+ + D +R+++ + + D+ +
Sbjct: 636 GNHPLSHLMGSVFGMHDRANIEVFCY-ALSQNDG--TEWRQRIQSEAEHFVDVSAMTSDN 692
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ +DKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 693 IARLINQDKIQILINLNGYTKGARNEIFALQPAPIQVSYMGFPGTTGAAYIDYLVTDEFV 752
Query: 316 DPPETKQKHVEELIRLPECFL----------CYTPSPEAGPVCPTPALTNGF----ITFG 361
P + E+L+ LP C+ C T PVCP G F
Sbjct: 753 SPSRYSHIYSEKLVHLPHCYFVNDYKQKNRDCLT------PVCPHKRSDYGLPEDKFIFA 806
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
FN L K+ P++ W IL VPNS L + P ++ R + G+ S ++ +
Sbjct: 807 CFNQLYKMDPEIFDTWCNILKRVPNSALWLLRFPAAGET---RVRAHAVARGVRSDQI-I 862
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ + ++H++ +L D+ LDT TT + L+ G+P +T+ A V SL
Sbjct: 863 FTDVAMKNEHIRRSALADLFLDTPLCNAHTTGTDILWAGLPMITLPLEKMATRVAGSLCV 922
Query: 482 KVGL-KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
GL + +I + EY A+ LA + L L L+++ P+ D + LE Y
Sbjct: 923 ATGLGEEMIVSSMKEYEDRAVDLALNPVKLQALTNKLKEVRMTCPLFDTARWVRNLERAY 982
Query: 541 RNMWHRYCKGDVP 553
MW+ YC P
Sbjct: 983 YKMWNLYCSSRHP 995
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 76/138 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + DMAI Y A ++P EA NN+G KD +++A+ CY+ L+++
Sbjct: 330 NLATIYYEQGQLDMAIRCYNQAIVYDPQFVEAYNNMGNALKDAGRVEEAINCYRSCLALQ 389
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y + AAA + AI+ + NNL V+Y+ G+ + AI
Sbjct: 390 ANHPQALTNLGNIYMEWSMISAAASFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC 449
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + +A NR
Sbjct: 450 YTEVLRIDPTAADALVNR 467
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E D A+++Y+ A P A+A N G +YK A+ CYQ AL +
Sbjct: 262 NLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCYQRALQAR 321
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NL +Y QG++D A +AI +P + EAYNN+G +DAG + AI+
Sbjct: 322 PDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFVEAYNNMGNALKDAGRVEEAINC 381
Query: 123 YEQCLKIDPDSRNAGQN 139
Y CL + + A N
Sbjct: 382 YRSCLALQANHPQALTN 398
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +DM I E A +P AE N+ +K++ ++D A+ Y A+ ++P
Sbjct: 127 LGAIYYQIRNYDMCIAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRP 186
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL YT +G+++ AA+ +A+A NP +A++NLG L + G I A Y
Sbjct: 187 NFCDAWSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCY 246
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
+ L+IDP A N LA ++ G DK
Sbjct: 247 IEALRIDPHFAIAWSN--LAGLFMEAGDLDK 275
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A +PH A A +NL ++ + +LDKA+ Y+ A+ +KP+F+ + N G VY G
Sbjct: 246 YIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALG 305
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A ++A+ A P YA AY NL +Y + G + +AI Y Q + DP A N
Sbjct: 306 MPQDAIMCYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFVEAYNN 364
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y A P+ +A +NL Y + L++A +C + AL+I
Sbjct: 160 NMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAIN 219
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ +P +A A++NL L+ +AG + A+
Sbjct: 220 PRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMY 279
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
Y++ +K+ P +A Y+N+G+
Sbjct: 280 YKEAVKLKPSFADA---------YLNQGN 299
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A A NP +A +NLG + K + + +A CY AL I
Sbjct: 194 NLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRID 253
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NL ++ G +D A ++A+ P++A+AY N G +Y+ G AI
Sbjct: 254 PHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMC 313
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y++ L+ PD A N LA Y +G D
Sbjct: 314 YQRALQARPDYAMAYGN--LATIYYEQGQLD 342
>gi|409989551|ref|ZP_11273106.1| hypothetical protein APPUASWS_02083, partial [Arthrospira platensis
str. Paraca]
gi|409939587|gb|EKN80696.1| hypothetical protein APPUASWS_02083, partial [Arthrospira platensis
str. Paraca]
Length = 632
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 265/574 (46%), Gaps = 43/574 (7%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + +++ AI+ Y+ NP+ E NL IY +D L A + AL +
Sbjct: 72 NLGTLLQQQQRYNEAIICYQNTLKLNPNLPETLANLCSIYLLQDQLQPAEAGLKRALEMN 131
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +L NLG++Y Q K++AA ++ + A + P Y EAY L ++ +LA A
Sbjct: 132 PQCVPALYNLGLLYKQQAKLEAAIKLFQAAASHQPNYTEAYFQLAEIWEFQSQFTLAKLA 191
Query: 123 YEQCLKIDP-----------------DSRNAGQNRLLAMNYINEGHDDKLFEAHR----- 160
Y++ +++P D N Q N I G F+ +
Sbjct: 192 YQRVQQLNPNYPAISHHIEFVKLNLCDWENYHQ---FINNIIQSGAILAPFQLNALPIPP 248
Query: 161 DWGKRFMRLYSQYTSWDNTKDPER-------PLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
+ ++ + + S +++P + L +GY+SP++++H+V I+ H+
Sbjct: 249 ELSQKVAQKKAASISQAISQNPLKFNYQKTDKLRLGYISPEFYSHAVGRLIKDIFKQHNR 308
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
++V Y + D T +++++ G +R + + + A + D I IL++L G
Sbjct: 309 GEFEVFSYHLLSAHDEVT----DQIIQGGDEFRHLDSLSAPEAAQQINNDGIQILIDLAG 364
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
+T NK ++A QPAP+Q +++GYPNT G I Y ITD+ P + EE+I LP
Sbjct: 365 YTGYNKPEILAYQPAPIQASFLGYPNTMGAEFIQYLITDNWVVPDSLSPFYTEEIIYLPH 424
Query: 334 CFLCYTPSPEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
F+C + P+ + L F FN KI+P + QVW ++L V S L +
Sbjct: 425 QFICSQMDIDDQPLNRSDFGLPETGFVFACFNRHYKISPDLFQVWMQLLQEVEGSVLWLS 484
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
+ T + G++ R+ P I N ++ L D+ LDT+ Y G +T
Sbjct: 485 ---LAVEETLSHLRQTAKAAGVDPQRLIFAPKIPHNQ-YLARMELADLGLDTWNYNGGST 540
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
T +LY G+P +T G +A +G S+ G+ +I + +Y + AL A++ L
Sbjct: 541 TIAALYGGLPVLTKPGVTNASRMGASICASAGVTEMICNSAVDYQEKALHWATNPQELQQ 600
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
LR ++ SP+ D F E+ + +WHR
Sbjct: 601 LRQRIKG--RDSPLFDVPQFVKNFETALQQIWHR 632
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
NP+ A NNLG + + + ++A+ CYQ L + PN ++L NL +Y +Q ++ A
Sbjct: 63 NPNYIPAHNNLGTLLQQQQRYNEAIICYQNTLKLNPNLPETLANLCSIYLLQDQLQPAEA 122
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
+++A+ NP A NLG+LY+ + AI ++ P+ A
Sbjct: 123 GLKRALEMNPQCVPALYNLGLLYKQQAKLEAAIKLFQAAASHQPNYTEA 171
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G QG++ A +KAI ANP Y A+NNLG L + + AI Y+ LK++P+
Sbjct: 40 GQALKKQGQLAGAETCFKKAILANPNYIPAHNNLGTLLQQQQRYNEAIICYQNTLKLNPN 99
>gi|313896818|ref|ZP_07830365.1| tetratricopeptide repeat family protein [Selenomonas sp. oral taxon
137 str. F0430]
gi|312974265|gb|EFR39733.1| tetratricopeptide repeat family protein [Selenomonas sp. oral taxon
137 str. F0430]
Length = 916
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 198/364 (54%), Gaps = 13/364 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YFI L D +++V YS + + D T F+ V WRD
Sbjct: 555 IGYISGDFREHVMQYFIWPFLAGFDRDDFEVYCYS-LGRTDQYTEFFKTLVTA----WRD 609
Query: 248 I--YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ +K+AA + D++DIL +L GHTA + L +A +PAPVQ++ +GY TTGL
Sbjct: 610 VSKQANAPEKIAARIYADEVDILFDLAGHTARSGLPALAWKPAPVQLSGLGYMATTGLSA 669
Query: 306 IDYRITDSLADPPETKQK--HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DPP + VE+L+RL F CY + PA G++ F SF
Sbjct: 670 VDYFVTDRYCDPPGSVGDVYFVEKLLRLTSQF-CYNGYTQLPVSEGAPARRCGYVQFASF 728
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N K+T ++L+VWA IL +P +RL++K + V ++++GL+ RV
Sbjct: 729 NQYLKMTDEMLRVWAEILRRLPTARLLLKNSAYEKKGVVRAAHERMKRVGLDMSRVQFER 788
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
D+M Y +DI+LDTFP+ G TTC++LYMGVP V+ H+ SLL +
Sbjct: 789 A---TRDYMLRYLDVDIALDTFPWPGGGTTCDALYMGVPVVSYYTERHSTRFTYSLLANI 845
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L ++ +YV+ A+ LA +V L L LRD M SPV D + +E YR++
Sbjct: 846 GLSDLASETLSDYVETAVMLAENVDLLDALHRELRDRMKNSPVMDQVGYIREMEGCYRDI 905
Query: 544 WHRY 547
W RY
Sbjct: 906 WARY 909
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 143/367 (38%), Gaps = 43/367 (11%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
+ +D E+ + +GY+S + + F+ A + ++V Y D T F E
Sbjct: 16 HRRDTEKKIRVGYLSDSFGGGAERDFLPAFFAAANPLRFEVYAYHTGTGGD--TALFAES 73
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
+R + ++ A ++R D+ID+LV+L+ ++ A ++ ++ Y
Sbjct: 74 ----AAAFRTLGACTAQEAAEVIRRDEIDLLVDLSFDASS----------AFIRDVFVRY 119
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF 357
P L + A+ ET E +P LCYTP L +G
Sbjct: 120 PARRLLSLAE----QCPAEGAETLPPVDGETDFVP---LCYTPIERRDSYAYRTPLLDG- 171
Query: 358 ITFGSFNNLAKITPKVLQVWARILCA----VPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
T S + + + +LCA +P RL++ P SV L+ +
Sbjct: 172 -TAPSIGLIGRADEGRREEIVTLLCALLARIPRIRLIL---PVSIGSV----LTDADVAR 223
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ + D LIL++ A +DI++ A C ++ VP +T V +
Sbjct: 224 ISEIGTDTAELILVDE---VADEELDIAIGV--NADPMKICRTVEYSVPILTADAFVGRY 278
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
G+ L GL IA + E A L DV L+ L +LR + SPV + +
Sbjct: 279 AAGI--LRAAGLGLEIAPDTAELAACAASLLHDVERLSYLHETLRWNLLDSPVSEASAYM 336
Query: 534 LGLESTY 540
+E Y
Sbjct: 337 FTMERAY 343
>gi|260888507|ref|ZP_05899770.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Selenomonas
sputigena ATCC 35185]
gi|330838186|ref|YP_004412766.1| tetratricopeptide TPR_2 repeat protein [Selenomonas sputigena ATCC
35185]
gi|260861704|gb|EEX76204.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Selenomonas
sputigena ATCC 35185]
gi|329745950|gb|AEB99306.1| tetratricopeptide TPR_2 repeat protein [Selenomonas sputigena ATCC
35185]
Length = 486
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 237/465 (50%), Gaps = 44/465 (9%)
Query: 103 YNNLGVLYRDAGSISLAIDAYEQCLKIDP---DSRNAGQNRLLAMNYINEGHDDKLFEAH 159
Y LG R + AY + + P R + LL +Y+ D++L E+H
Sbjct: 47 YGRLGYFLRFLERAEESAAAYREAVLYAPYLAQQRKLYSDYLLICHYLPHVSDEELAESH 106
Query: 160 RDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVV 219
+ + F R + + + IGY+S ++ TH +S F+ L D ++V
Sbjct: 107 FFY-QNFFRPKEELQHVRDDHRRHSKIRIGYLSSNFKTHIMSCFMMQLLALADRDRFEVY 165
Query: 220 VYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT-ANN 278
Y +D E++ G IWR+I + K+ A + D+IDIL +L HT +
Sbjct: 166 CYDLGGLSDGAA----EQMKSFGNIWRNIALPEAKERARTIAADEIDILFDLGVHTDGGH 221
Query: 279 KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHV-EELIRLPECFLC 337
L + + APVQ+ IGY +T+GL +DY ++D DPP + E+L+RL C
Sbjct: 222 GLATLGYKAAPVQIAGIGYMSTSGLKAVDYYLSDRFLDPPGKGDAYFSEKLLRLSHSHFC 281
Query: 338 YTP-----------SPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
YTP P PV FG FNN AKI+ ++L++W +L VP
Sbjct: 282 YTPFEEIFKSTIDWQPHERPV------------FGCFNNSAKISEEMLRLWLTLLRRVPG 329
Query: 387 SRLVVKC-KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
++L++K KP +++ + LS LG +++ P+ L D++ Y MDI+LDTF
Sbjct: 330 AKLLLKAWKP---EALIEKALS----LGYCRGEIEVRPMTL---DYVHEYMDMDIALDTF 379
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
PY G TTCE++YMGVP VT+AG+ H G+SLL VGL L++ +EYV+ A LAS
Sbjct: 380 PYTGGGTTCEAIYMGVPVVTLAGTRHGTRFGLSLLENVGLGELVSNTPEEYVEKAAALAS 439
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
D LA L +LR +M +SPV DG+++ +E+ Y ++W + G
Sbjct: 440 DAELLAALHKNLRPMMQRSPVMDGKSYVREIEAMYEDVWQAWLDG 484
>gi|291567291|dbj|BAI89563.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1020
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 265/574 (46%), Gaps = 43/574 (7%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + +++ AI+ Y+ NP+ E NL IY +D L A + AL +
Sbjct: 460 NLGTLLQQQQRYNEAIICYQNTLKLNPNLPETLANLCSIYLLQDQLQPAEAGLKRALEMN 519
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +L NLG++Y Q K++AA ++ + A + P Y EAY L ++ +LA A
Sbjct: 520 PQCVPALYNLGLLYKQQAKLEAAIKLFQAAASHQPNYTEAYFQLAEIWEFQSQFTLAKLA 579
Query: 123 YEQCLKIDP-----------------DSRNAGQNRLLAMNYINEGHDDKLFEAHR----- 160
Y++ +++P D N Q N I G F+ +
Sbjct: 580 YQRVQQLNPNYPAISHHIEFVKLNLCDWENYHQ---FINNIIQSGAILAPFQLNALPIPP 636
Query: 161 DWGKRFMRLYSQYTSWDNTKDPER-------PLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
+ ++ + + S +++P + L +GY+SP++++H+V I+ H+
Sbjct: 637 ELSQKVAQKKAASISQAISQNPLKFNYQKTDKLRLGYISPEFYSHAVGRLIKDIFKQHNR 696
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
++V Y + D T +++++ G +R + + + A + D I IL++L G
Sbjct: 697 GEFEVFSYHLLSAHDEVT----DQIIQGGDEFRHLDSLSAPEAAQQINNDGIQILIDLAG 752
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
+T NK ++A QPAP+Q +++GYPNT G I Y ITD+ P + EE+I LP
Sbjct: 753 YTGYNKPEILAYQPAPIQASFLGYPNTMGAEFIQYLITDNWVVPDSLSPFYTEEIIYLPH 812
Query: 334 CFLCYTPSPEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
F+C + P+ + L F FN KI+P + QVW ++L V S L +
Sbjct: 813 QFICSQMDIDDQPLNRSDFGLPETGFVFACFNRHYKISPDLFQVWMQLLQEVEGSVLWLS 872
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
+ T + G++ R+ P I N ++ L D+ LDT+ Y G +T
Sbjct: 873 ---LAVEETLSHLRQTAKAAGVDPQRLIFAPKIPHNQ-YLARMELADLGLDTWNYNGGST 928
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
T +LY G+P +T G +A +G S+ G+ +I + +Y + AL A++ L
Sbjct: 929 TIAALYGGLPVLTKPGVTNASRMGASICASAGVTEMICNSAVDYQEKALHWATNPQELQQ 988
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
LR ++ SP+ D F E+ + +WHR
Sbjct: 989 LRQRIKG--RDSPLFDVPQFVKNFETALQQIWHR 1020
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ G A + + A ++ A NP+ A NNLG + + + ++A+ CYQ L +
Sbjct: 425 FEQGQALKKQGQLAGAETCFKKAILANPNYIPAHNNLGTLLQQQQRYNEAIICYQNTLKL 484
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PN ++L NL +Y +Q ++ A +++A+ NP A NLG+LY+ + AI
Sbjct: 485 NPNLPETLANLCSIYLLQDQLQPAEAGLKRALEMNPQCVPALYNLGLLYKQQAKLEAAIK 544
Query: 122 AYEQCLKIDPDSRNA 136
++ P+ A
Sbjct: 545 LFQAAASHQPNYTEA 559
>gi|253999006|ref|YP_003051069.1| hypothetical protein Msip34_1296 [Methylovorus glucosetrophus
SIP3-4]
gi|253985685|gb|ACT50542.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus glucosetrophus
SIP3-4]
Length = 697
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 168/595 (28%), Positives = 274/595 (46%), Gaps = 64/595 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIY-------KDRDNLDKAVECY 55
NLG Y E+ +F+ A Y +P AE + LG +D +A CY
Sbjct: 110 NLGNLYQELGRFEDAAACYRRVLRVHPGEAEVRDALGHSLLGWGNACQDAGRYAEAERCY 169
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+ AL++ PN + NLG GK AA ++AIA +P A+A+NNLG R+ G
Sbjct: 170 EEALTLAPNDAALHFNLGNARRELGKTAQAAASYQRAIALSPDDADAHNNLGNALRELGQ 229
Query: 116 ISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE--GHDDKLFE---------------- 157
+ AI Y++ L + PD +A + + + + G + ++ E
Sbjct: 230 LPEAIACYQRALALKPDLYHARVHLIHQQQHAADWRGLEQQIDEVRGWLHSAPTAQISPF 289
Query: 158 ----------------AHRDWGKRFMRLYSQYT--SWDNTKDPERPLVIGYVSPDYFTHS 199
A R R+ L +Q + ++ + + + L IGY+S D+ H
Sbjct: 290 AFLAMPGTTAAEQRLCAERWLENRYASLNAQASELAFTHIRHENKRLRIGYLSADFRRHP 349
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
++ + L HD +V YS V ++ R+++ + DI + A
Sbjct: 350 LAALVTELLELHDRDQLEVFAYSYGVDDNSPE---RQRLQHAVDHFVDIRALSLVDAAKR 406
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG----LPTIDYRITDSLA 315
+ D IDILV+LTG T +++ G++A +PAP+ + W+G+P T G P DY ++D+
Sbjct: 407 IHADGIDILVDLTGFTQSSRTGIVALRPAPISINWLGFPGTMGSLHGKPLFDYVLSDAYI 466
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFITFGSFNNLAKIT 370
P ++ + E L+ LP Y P+ P+ TPA L + FN KIT
Sbjct: 467 TPAASQPDYAEHLLLLPGS---YQPNDRNRPIGKTPARVDYGLPEEAFVYCCFNQSFKIT 523
Query: 371 PKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429
P V W RIL VP+ L +++ +++ + G++ R+ P + +
Sbjct: 524 PAVFACWMRILQQVPDGVLWLLESNATATLNLQ----QAAKAAGVDPARLVFAPRVAMA- 578
Query: 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLI 489
DH+ ++L D+ LDT PY TT ++L+M +P +T +G A V SLL V L LI
Sbjct: 579 DHLARHALADLFLDTLPYNAHTTASDALWMCLPVLTCSGDTFASRVAGSLLHAVNLPELI 638
Query: 490 AKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
A + Y +A+ L D L LR L+ + P+ D ++FA LES Y+++W
Sbjct: 639 APDMAAYEAMAINLKHDPATLEGLRERLQQASADLPLFDTRHFARKLESVYQDIW 693
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 7/146 (4%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G+ K A+ YE A P NNLG +Y++ + A CY+ L
Sbjct: 74 LINHGLTLRAAGKRHEALKSYERAMLLTPKDLVLQNNLGNLYQELGRFEDAAACYRRVLR 133
Query: 61 IKPN-------FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
+ P SL G G+ A E+A+ P A + NLG R+
Sbjct: 134 VHPGEAEVRDALGHSLLGWGNACQDAGRYAEAERCYEEALTLAPNDAALHFNLGNARREL 193
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQN 139
G + A +Y++ + + PD +A N
Sbjct: 194 GKTAQAAASYQRAIALSPDDADAHNN 219
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+F A + Y P A+ + LG++ + +A E A++++P + L N
Sbjct: 18 RFQQAELLYRQLLQHAPRHADGLHMLGILCYQTERAAEAAELIAQAVALEPRNADMLINH 77
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
G+ GK A + E+A+ P NNLG LY++ G A Y + L++ P
Sbjct: 78 GLTLRAAGKRHEALKSYERAMLLTPKDLVLQNNLGNLYQELGRFEDAAACYRRVLRVHP 136
>gi|395004964|ref|ZP_10388909.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Acidovorax sp. CF316]
gi|394317085|gb|EJE53724.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Acidovorax sp. CF316]
Length = 781
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 249/522 (47%), Gaps = 16/522 (3%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVV-YTVQGKMDAAAEMIEKAIAA 95
NLG + + + LD+AV ++ A+S++ + L +G++ + Q DA + E +
Sbjct: 259 NLGNVLRAQARLDEAVGAFRHAMSLEAGNATGLMAMGLLCHETQALADARRYLSEAVASP 318
Query: 96 NPTYAE---AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
T A+ A L L+ G + + + L P R L A+N
Sbjct: 319 AATQAQRLDAMVELASLHATMGEHGASETLFMEVLSARPHERKYWGKWLFALNNHPFKTP 378
Query: 153 DKLFEAHRDWGKR----FMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
++ E ++ + + L + + +R + IGYVS D+ H V F++ L
Sbjct: 379 HQILEQYQAFATQCFGAATPLPAAAAPPRLAQAEKRRIHIGYVSADFTQHPVRLFLQPLL 438
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+HD+ ++V + A + A+ + + ++ W G+ + +VA VR +D+L
Sbjct: 439 AHHDHTRFEVSAF-ANLSGPAEVLPVYQTMVDH---WHFTKGMTDHEVAEQVRNSCVDVL 494
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V+L+GHT N+L + A +PAPV ++W+G+ ++TGL IDY +TD+ A P + E+
Sbjct: 495 VDLSGHTGGNRLDVFALKPAPVAMSWLGFGSSTGLAAIDYFLTDTHAVPAQDDAYFAEQA 554
Query: 329 IRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
RL FL Y P+ G P PAL G ITF + + + ++ WA++L VP S
Sbjct: 555 WRLDRPFLVYRPTAGMGDPGPLPALAAGHITFATLSRSIRFNDELFAAWAQVLLRVPGSV 614
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L + K ++ + + +G+ R+ + +D+SLD FP+
Sbjct: 615 LRIDSKNMRDANLVRQTQARFAAMGIGVQRIQ----CGFHSPPWDVLRSVDVSLDCFPHN 670
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
TT ESLYMGVP VT++ +G ++L VG +A EYV A+ LASD+
Sbjct: 671 SGTTLLESLYMGVPYVTLSDRPGVGRLGAAILQGVGRPEWVAHTVQEYVDKAVALASDLP 730
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
LA +R SLR+ M SP+ D FA +E Y M +G
Sbjct: 731 RLAQVRASLREAMVASPLMDEAGFARSVEEAYTRMLESRGQG 772
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
N +G + + + A + ++ A+ + P F Q+ +LG+ G A +E+A+A
Sbjct: 122 NKVGDVLYTQGQFEPAQKAFEQAVYLAPCFGQAWFHLGIARMGLGHYAQAQAPLEQALAH 181
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A+A + LG ++ + G+ A A Q L + P+
Sbjct: 182 GHPPAQAQSALGAVFLELGAHRQAHAALSQALALQPE 218
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 56/129 (43%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
++LG+A + + A E A A+A + LG ++ + +A AL++
Sbjct: 156 FHLGIARMGLGHYAQAQAPLEQALAHGHPPAQAQSALGAVFLELGAHRQAHAALSQALAL 215
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P + LNNL + G + A +I + +A + NLG + R + A+
Sbjct: 216 QPEDTMVLNNLSIASQNLGLLAEAEALIRRKLALQGRDVNGWINLGNVLRAQARLDEAVG 275
Query: 122 AYEQCLKID 130
A+ + ++
Sbjct: 276 AFRHAMSLE 284
>gi|399068783|ref|ZP_10749182.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Caulobacter sp. AP07]
gi|398045472|gb|EJL38188.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Caulobacter sp. AP07]
Length = 580
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 232/476 (48%), Gaps = 19/476 (3%)
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+M AA ++++ + +P LG+ + G + AI YE L+ P + + +
Sbjct: 118 QMAAATHVMQRLMEMHPAEPGLRLKLGLALQHQGRMDEAIATYEGALRHWPSAED--HSY 175
Query: 141 LLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERP---LVIGYVSPDYFT 197
L D + + G R++ L++ T RP L IGY +P +
Sbjct: 176 LHYARAFQRATPDAMLQE----GLRWVELHAPKTQAPRPPALHRPDGRLRIGYFAPLFNQ 231
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG-IWRDIYGIDEKKV 256
H +S FI+ L +HD + VV YS D K +K G +WR++ D+
Sbjct: 232 HQLSKFIQPVLEHHDRTRFSVVCYSGAPAGDDTA-----KAIKAGADLWREVELFDDDAF 286
Query: 257 AAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRI-TDSLA 315
A V EDKID+LV+L GHTA ++L + A +PAP+Q++WI Y TTGL DY + D +
Sbjct: 287 ARQVVEDKIDVLVDLWGHTAGSRLLLFARKPAPIQLSWINYVETTGLTQFDYVLHADGYS 346
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQ 375
D P+ + + E ++ + Y PS + P TP LT+G +TFG F + AKIT +V+
Sbjct: 347 DLPDAQDLYSETILPIGPIVAPYRPSHDIPPPNDTPMLTSGAMTFGCFGHPAKITLEVIA 406
Query: 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
WA IL A+P ++LV++ F ++ + + G+ + R+ + P D + AY
Sbjct: 407 TWASILEALPEAKLVLRSVYFDDLPLKRTIWAQFDAFGIGAGRI-VFPPFASGKDFLLAY 465
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN-VGVSLLTKVGLKHLIAKNED 494
+D+ LD FPY G TTT +++ GVP +T G H HN + L GL L+ ++ +
Sbjct: 466 HAVDLILDPFPYQGLTTTLDAISSGVPVLTWRGD-HMHNRIAAVTLRACGLDELVCESRE 524
Query: 495 EYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
YVQ A+ LA D L LR +R S D F E+ M Y G
Sbjct: 525 AYVQTAIDLAGDPQRLNALRARVRPGFDASAYRDEVGFTRRYETALEVMADAYRPG 580
>gi|443326782|ref|ZP_21055424.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Xenococcus sp. PCC 7305]
gi|442793575|gb|ELS03020.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Xenococcus sp. PCC 7305]
Length = 1023
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 158/603 (26%), Positives = 281/603 (46%), Gaps = 63/603 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPH----CAEACNNLGVIYKDRDNLDKAVECYQ 56
+ +LG+ + + A Y+ F + H CA+A + GVI + ++ A+E
Sbjct: 140 LLDLGIEHHRAKRIPEAATCYQQVFLYQAHRQDICADAWHLWGVIAYEENDYKTAIERMT 199
Query: 57 MALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY------ 110
A+ + PN S N+LG Y Q K A +K++ P++ +A++NL ++
Sbjct: 200 RAIELNPNSSSFYNSLGAAYRGQKKFTEAINCYQKSLQLQPSFQQAHDNLAYVFLDQGNA 259
Query: 111 -RDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE-----GHDDKLFEAHRD--- 161
D G+ + AI + E+ L++ PD A +++ I ++ +L +A +
Sbjct: 260 LADQGNYAEAIASCERALELKPDFSEALLVYVMSRRRICSWQGLVAYEKELLDASQSSES 319
Query: 162 -------------------WGKRFMRLYSQYTS---WDNTKDPERPLVIGYVSPDYFTHS 199
K F ++ W+ + + + + Y+S DY H+
Sbjct: 320 ILPPFVPMAIADNPEIQLTTAKNFCNNVVDHSCIPLWNGQRYSHQKIRLAYLSADYHQHA 379
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
+Y + HD ++V +S +++ R ++++ + D++ + + +VA
Sbjct: 380 TAYLMAELFERHDCSRFEVFAFSFGPPSNSP---MRHRLVRAFDHFIDVHQMSDLEVAQK 436
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE 319
+R +IDI ++L G+T +N+ ++A +PAP+QV ++GYP+T G IDY + D P +
Sbjct: 437 IRNLEIDIAIDLKGYTKDNRKQILAYRPAPIQVNYLGYPSTMGADFIDYILVDPFIVPSD 496
Query: 320 TKQKHVEELIRLPECFLC---------YTPSPEAGPVCPTPALTNGFITFGSFNNLAKIT 370
+ E+L+ LP+C+ Y PS E + P GFI F FNN KIT
Sbjct: 497 QQPYFTEKLVHLPDCYQVNDSKRTIAQYVPSREECNLPP-----QGFI-FCGFNNSYKIT 550
Query: 371 PKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430
P+ +W R+L AVP+S L + K + + G++ R+ P L D
Sbjct: 551 PEFFNIWMRLLKAVPHSVLWLLSK---NQDMTENLRQEAQARGVDPDRLVFAPKKDLP-D 606
Query: 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA 490
H+ L D+ LD P TTT ++L++G+P +T AG A V SLL +GL L+
Sbjct: 607 HLARQQLADLFLDNLPCNAHTTTSDALWVGLPVLTCAGQSFAARVAGSLLHAIGLPELVT 666
Query: 491 KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
N +Y LAL++A+ L ++ L+ ++P+ D F +E+ Y+ MW +G
Sbjct: 667 YNLPDYEALALKIATQPALLEKIKTKLQHNRLRTPLFDCDRFRRNIEAAYQQMWSISQQG 726
Query: 551 DVP 553
P
Sbjct: 727 KPP 729
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNP-------HCAEACN---NLGVIYKDRDNLDKAV 52
+LG Y E +F A Y+ A P A AC +LG+ + + +A
Sbjct: 98 SLGNVYLEQQQFQSACKSYQKALDLKPTDTDTRKKLAIACEKLLDLGIEHHRAKRIPEAA 157
Query: 53 ECYQMALSIKPNF----SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
CYQ + + + + + GV+ + A E + +AI NP + YN+LG
Sbjct: 158 TCYQQVFLYQAHRQDICADAWHLWGVIAYEENDYKTAIERMTRAIELNPNSSSFYNSLGA 217
Query: 109 LYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
YR + AI+ Y++ L++ P + A N LA ++++G+
Sbjct: 218 AYRGQKKFTEAINCYQKSLQLQPSFQQAHDN--LAYVFLDQGN 258
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+ Y KF A +++LA + +A + LGV R +A++ A+ IKP
Sbjct: 31 LGIKYLRSQKFSEAEAYFQLALTSQTNNPDAWHLLGVTSVQRQKYTQAIDQITQAIKIKP 90
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT----------YAEAYNNLGVLYRDA 113
+ ++LG VY Q + +A + +KA+ PT E +LG+ + A
Sbjct: 91 TEAIFYSSLGNVYLEQQQFQSACKSYQKALDLKPTDTDTRKKLAIACEKLLDLGIEHHRA 150
Query: 114 GSISLAIDAYEQCL 127
I A Y+Q
Sbjct: 151 KRIPEAATCYQQVF 164
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 31 CAEACNNL--GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
C +A L G+ Y +A +Q+AL+ + N + + LGV + K A +
Sbjct: 22 CEDALQQLELGIKYLRSQKFSEAEAYFQLALTSQTNNPDAWHLLGVTSVQRQKYTQAIDQ 81
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
I +AI PT A Y++LG +Y + A +Y++ L + P
Sbjct: 82 ITQAIKIKPTEAIFYSSLGNVYLEQQQFQSACKSYQKALDLKP 124
>gi|297538669|ref|YP_003674438.1| hypothetical protein M301_1481 [Methylotenera versatilis 301]
gi|297258016|gb|ADI29861.1| TPR repeat-containing protein [Methylotenera versatilis 301]
Length = 629
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 158/545 (28%), Positives = 253/545 (46%), Gaps = 59/545 (10%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A C++ AL +P + L NLG GK AA EKAI NP A+ YNNLG +
Sbjct: 84 AEACFEEALENQPANAAYLYNLGNAQRELGKPKEAALQYEKAIRLNPNDADIYNNLGNVQ 143
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL-FEAHRDWGK----- 164
R+ G + AI +Y++ L ++P +A + + +I + ++ RDW K
Sbjct: 144 RELGLLDFAIASYQKALDLNPYLYHAKVHLVHQKQHICDWQGLEVDISTIRDWVKNVPQA 203
Query: 165 ----------------------------RFMRLYSQYTSWD-NTKDPER--PLVIGYVSP 193
R+ L Q + K P + + IGY+S
Sbjct: 204 QISPFAFLAMPTTTANEQKLCANNWVSNRYAALIKQGETLSFKNKLPSKNQKIKIGYLSA 263
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDE 253
D+ H +++ + + HD ++ +S V R ++ K + DI + E
Sbjct: 264 DFRLHPLAFLVSELIELHDRSKFETFAFSYGVNDKTNA---RARLEKAFDEFYDIRNLSE 320
Query: 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL-----PTIDY 308
A + E +IDILV+LTG T ++ G+ A +PAP+ V W+G+P T G+ P DY
Sbjct: 321 IDAAKKINEHQIDILVDLTGFTQTSRSGIAALRPAPINVNWLGFPGTMGMMNNNKPLFDY 380
Query: 309 RITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFITFGSF 363
++DS PP+++ + E+L LP C Y P+ P+ P+ L G F F
Sbjct: 381 ILSDSFITPPDSESHYAEKLALLPHC---YQPNDRKRPIGKQPSRESCNLPEGAFVFCCF 437
Query: 364 NNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
N KITP+ +VW R+L AVPNS L +++ + + ++ + + + R+
Sbjct: 438 NQSFKITPEFFKVWMRLLNAVPNSVLWLLESNTW----AKQNLINQAAKNNITAERLIFA 493
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P + + DH+ + D+ LDT PY TT + L+MG+P +T G A V SLLT
Sbjct: 494 PRMSI-ADHLARHIHADLFLDTSPYNAHTTCSDGLWMGLPVLTCVGDTFAARVAGSLLTA 552
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+ LI + +Y AL LA++ T L ++ L S + D FA LE++Y +
Sbjct: 553 ADMPELITYSLQDYENKALYLANNSTELEKIKQKLHATKLTSALFDTNQFAHALENSYLS 612
Query: 543 MWHRY 547
MW ++
Sbjct: 613 MWQQH 617
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+YNLG A E+ K A + YE A NP+ A+ NNLG + ++ LD A+ YQ AL
Sbjct: 102 LYNLGNAQRELGKPKEAALQYEKAIRLNPNDADIYNNLGNVQRELGLLDFAIASYQKALD 161
Query: 61 IKP 63
+ P
Sbjct: 162 LNP 164
>gi|72382664|ref|YP_292019.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
gi|72002514|gb|AAZ58316.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
Length = 739
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 160/573 (27%), Positives = 269/573 (46%), Gaps = 42/573 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ E+ A + Y A NP+ A+A +NLG + KD DNL A Y+ A+ I
Sbjct: 174 YNLGIILKELGNLQDAELSYRKAIQINPNYADAYSNLGNVLKDLDNLQDAELSYRKAIQI 233
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+ + + +NLG V G + A KAI NP +AEA+ NLG L +D G + A
Sbjct: 234 NPDHADAYSNLGNVLKDLGNLQDAELSYRKAIQINPDHAEAHFNLGNLLKDLGKLQEAKK 293
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH--------------------RD 161
++ ++I+P++ + L + + + + + + A D
Sbjct: 294 VLKKSIEIEPNNLDYLSTFLFVLLILCDWDEIEKYSADLNLIETDLKTIINPFHLMHLED 353
Query: 162 WGKRFMRL---YSQYTSWDN----TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
+ ++L YSQ D T + IGY S D+ H+VS+F+ HD
Sbjct: 354 NPENELKLAIKYSQINKSDTLPNLTSYSHSKINIGYFSSDFRNHAVSFFLARIFELHDSS 413
Query: 215 NYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGH 274
+ + YS ++D T R + V +R++ +++ ++ + R+D+IDI ++L G
Sbjct: 414 RFNIYAYSLRKESDGYTERIKNAVF----CFREVSDLNDIEIVNIARDDQIDIAIDLNGI 469
Query: 275 TANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPEC 334
T + + + + AP+Q+ + GYP T G + D+RIT + P E K+ + E+++ LP+
Sbjct: 470 TKSRRKYIFEYRVAPIQINYFGYPGTMGSESYDFRITKKIIVPEEDKKFYTEKILYLPDN 529
Query: 335 FL----CYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
+ S E + F+ F FN KIT K +W R+L + NS L
Sbjct: 530 IIPIDDTQHISTEKFSREELGLPLDSFV-FTCFNRTEKITRKEFDIWMRLLKKIDNSVLW 588
Query: 391 VKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT 450
+ KP + S L + + R+ + LN DH+ + D+ LDTF Y
Sbjct: 589 L-IKPH--KAAIENLYSELNKQSMNKERIVFAEFMNLN-DHLSRHEYGDLFLDTFNYNAG 644
Query: 451 TTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510
TT SL+ G+P +T+AG ++ L + L LI NE +Y LA +LA++ L
Sbjct: 645 TTGALSLWAGLPIITLAGKTNSSRASAGFLNALDLNGLITYNEYDYESLAYELATNKKKL 704
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
++R L++ +S D + + LE Y ++
Sbjct: 705 EHIRNKLKN--KQSSCFDPYKYTIELEKLYTDI 735
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ K A + Y A NP+ A+A NLG+I K+ NL A Y+ A+ I
Sbjct: 141 NLGNVLKDLGKSQDAELSYRKAIQINPNYADAHYNLGIILKELGNLQDAELSYRKAIQIN 200
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN++ + +NLG V + A KAI NP +A+AY+NLG + +D G++ A +
Sbjct: 201 PNYADAYSNLGNVLKDLDNLQDAELSYRKAIQINPDHADAYSNLGNVLKDLGNLQDAELS 260
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+PD A N
Sbjct: 261 YRKAIQINPDHAEAHFN 277
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G ++ A ++ A NP+ A A +NLG + KD A Y+ A+ I
Sbjct: 107 NYGAILRDLGNLQDAELYTRKAIKINPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQIN 166
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN++ + NLG++ G + A KAI NP YA+AY+NLG + +D ++ A +
Sbjct: 167 PNYADAHYNLGIILKELGNLQDAELSYRKAIQINPNYADAYSNLGNVLKDLDNLQDAELS 226
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+PD +A N
Sbjct: 227 YRKAIQINPDHADAYSN 243
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL--NNLGVVYTVQGKMDAAAEMIEKAIA 94
N + + N+ +A + YQ I FS + +N G + G + A KAI
Sbjct: 73 NQAFKFHSQGNIKEAAKNYQYF--INQGFSDHMVFSNYGAILRDLGNLQDAELYTRKAIK 130
Query: 95 ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
NP YA AY+NLG + +D G A +Y + ++I+P+ +A N
Sbjct: 131 INPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQINPNYADAHYN 175
>gi|374364676|ref|ZP_09622777.1| hypothetical protein OR16_00860 [Cupriavidus basilensis OR16]
gi|373103808|gb|EHP44828.1| hypothetical protein OR16_00860 [Cupriavidus basilensis OR16]
Length = 732
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 229/459 (49%), Gaps = 48/459 (10%)
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
+P A N + ++ G + A++A + +++ P + N L AM + E L
Sbjct: 142 DPNEPIAACNYALALKETGEMGEAMEALWKAVRLAPKNLAIRANLLFAMLFAQETTAADL 201
Query: 156 FEAHRDW------GKRF-MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
R + G+RF +R ++ + P+ +G +S D H+ +YFI L
Sbjct: 202 LREARAYERLLLAGQRFALRKHA-------LRQDGGPIRLGLLSNDLLRHACAYFILPLL 254
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
D +VV +S ++D T +K+ + ++ G + +VR +ID+L
Sbjct: 255 ANLDRSRVEVVAFSLNPQSDHVT----DKIRLHANQFIELAGKSTADIVDIVRGQQIDVL 310
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
++L GHT + L M APVQ+TW+GYP +TGL IDYRITD DP + + E L
Sbjct: 311 IDLGGHTGTSPLPYMVHGLAPVQMTWLGYPGSTGLSAIDYRITDWTCDPEGFEPHYSEAL 370
Query: 329 IRLPECFLCYTP---SP-----EAGPVCPTPALTNGF--ITFGSFNNLAKITPKVLQVWA 378
+R P F Y P SP V TPAL NG ITFGS NNL K+T + L +W
Sbjct: 371 LRAP-AFCTYAPLIHSPLETYGAKYRVQDTPALRNGTGAITFGSCNNLGKVTDQTLALWG 429
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
++ P SRL+++ + D+V L+ L ++G+++ +D
Sbjct: 430 AVMARCPGSRLLIEARDIDNDTVSGPLLARLARVGIDANNID------------------ 471
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
I LDT+P G TTTC++++MGVP V+ AG+ + + +L +GL L+ +E EYV+
Sbjct: 472 -IVLDTWPLTGGTTTCDAVWMGVPVVSRAGAAYHSRISAGVLHAIGLDGLVCADEGEYVE 530
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+A+ LA+ + L LR+S R +SP+ D FA LE
Sbjct: 531 VAVHLATHLEELNALRLSTRQRFEQSPLADSAGFARWLE 569
>gi|401565692|ref|ZP_10806514.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC6]
gi|400185544|gb|EJO19772.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC6]
Length = 906
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 196/361 (54%), Gaps = 13/361 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YFI L D +++V VYS + + D + F+ V WRD
Sbjct: 545 IGYISGDFRQHVMQYFIWPFLAGFDQDSFEVYVYS-LGEPDQFSQFFQTLVT----CWRD 599
Query: 248 IY--GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ +D ++A + D+IDIL +L GHTA + L +A +PAP+Q++ +GY TTGLP
Sbjct: 600 LSDCNMDMAEIAGKIYRDEIDILFDLAGHTAESGLAALAWKPAPIQLSGLGYMATTGLPA 659
Query: 306 IDYRITDSLADPPE--TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DP ++Q +VE+L+RL F CY PA G+I F SF
Sbjct: 660 VDYFVTDHYCDPEGGGSEQVYVEKLLRLTSQF-CYNGYTHLPASDGAPARHRGYILFASF 718
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N KI +L W +I+ +PNSRL++K + V L+++G + RV P
Sbjct: 719 NQYRKIRDDMLVAWHQIMERIPNSRLLLKNSAYQQPGVAMTAYKRLKEMGFDMSRVTFEP 778
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
D+M Y +DI+LDTFP+ G TTC++LYMGVP ++ H+ S+L +
Sbjct: 779 G---TKDYMMRYLDVDIALDTFPWPGGGTTCDALYMGVPVISYYTERHSTRFSYSILANM 835
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L ++ ++Y++ A+ LA ++ L L LR M SPV D + + +E YR +
Sbjct: 836 GLAELASERMEDYIETAVVLAGNLDLLDALHRELRPRMKASPVMDQEGYIREMEGCYRAI 895
Query: 544 W 544
W
Sbjct: 896 W 896
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 126/345 (36%), Gaps = 76/345 (22%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
+GY+S D+ T + A ++D + + Y V+ D + K R+
Sbjct: 23 LGYLSSDFGTGRTRDLLPAFFFWYDRARFDIYAYHTGVEGDTASF-------AKNATLRE 75
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKL-GMMACQPAPVQVTWIGYPNTTGLPTI 306
I ++ A ++ DKID+LV+L+ N + +M +PAP
Sbjct: 76 IGHHSPQEAAEEIQRDKIDLLVDLSLRMPNGHIRSIMQLRPAPY---------------- 119
Query: 307 DYRITDSLADPPETKQKHVEELIRLP-----ECFL-CYTPSPEAGPVC-PTPALTNGFIT 359
I AD P K + E RLP E F CYTP TP L G +
Sbjct: 120 ---IVSLAADCP----KELAE--RLPSVEGDEIFSHCYTPFERVQHYTYRTPLLDTGVPS 170
Query: 360 FGSFNNLAK-ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
G L + + + + ++L V RL++ + + + + + + G E
Sbjct: 171 IGVAGELQRDEAEQFVTLVVKLLQGVHAVRLILPAR--VAEGLSEEDFARIAEAGSEDAV 228
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPY----------AGTTTTCESLYMGVPCVTMAG 468
++L +D PY C + GVP +T
Sbjct: 229 LEL--------------------VDELPYEVLDLVVGVDVDLVDVCRAADHGVPLLTTEA 268
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANL 513
SV H+ + LL K+ L + A N E V +L SD + L+
Sbjct: 269 SVCGHHARM-LLEKLEL--MPAYNGAELVAEIGRLLSDQSRLSEF 310
>gi|374999539|ref|YP_004975627.1| hypothetical protein AZOLI_p60044 [Azospirillum lipoferum 4B]
gi|357428510|emb|CBS91467.1| conserved protein of unknown function; putative TPR domain
[Azospirillum lipoferum 4B]
Length = 679
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/587 (27%), Positives = 261/587 (44%), Gaps = 44/587 (7%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + A+ ++ P AE N G + D A + AL ++
Sbjct: 93 NLGTVLQSLGRMGEALAAHDRCVLLGPAAAEGYINRGSARLTLGDRDGAATDFARALRLR 152
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + NLGV ++ A + +A+ A+P + EA + R+ G + A A
Sbjct: 153 PIDALAAANLGVALREGHRVAEAERALRRALIADPAHGEAMLGYAHVLRELGRFAEAHTA 212
Query: 123 YEQCLKIDPDSRNA---------------GQNRLLAMNYINEGHDDKLF----------- 156
YE+ + + P A +RL M D +
Sbjct: 213 YERAVALTPAKTEALCYHLYLKQTLCAWTDYDRLCRMVTDTIDRDVGVVIPLAALSIDTT 272
Query: 157 EAHRDWGKR--FMRLYSQYTS--WDNTKDPERP--LVIGYVSPDYFTHSVSYFIEAPLVY 210
A +D R F RL + +S DP R L I YVS D+ H+ +Y
Sbjct: 273 PAQQDRAARMFFDRLIKRASSVPMPARPDPRRDGRLRIAYVSADFHEHATAYLAAELFEL 332
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
HD + ++V+ YS D +R +++++ +RDI + VA + +D +DI+V+
Sbjct: 333 HDRERFEVLAYS-YGPDDGSAMR--KRLVQAFDHFRDIRSVPLDAVARRMADDGVDIMVD 389
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
L G+T +L +++ + AP++V+++GYP T G P +DY I D PPE + + E L
Sbjct: 390 LKGYTKQTRLDLLSRRLAPIEVSYLGYPGTIGCPHMDYVIGDRFVTPPEHQPFYAERLAI 449
Query: 331 LPECFLC---YTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
LP+ + P P+ P L + F +FN KI+P + +W RIL VP S
Sbjct: 450 LPDAYQINDRRRPLPDRVPSRAECGLPADGVVFAAFNTAYKISPAMFALWMRILKRVPGS 509
Query: 388 RL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
L + + P ++ ++ + G++ R+ P L DH+ Y + D++LDT P
Sbjct: 510 VLWLFEANPLAAANL----TASAQAQGVDPARLVFAPPRPLP-DHIARYRVADLALDTLP 564
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
Y G TTT ++L+ G P VT G A V SLL GL + ++ EY ++A+ LA D
Sbjct: 565 YTGHTTTSDALWAGCPVVTCLGGTFASRVAASLLNAAGLPDTVTRSLAEYEEMAVALAGD 624
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A LR L D P+ D F LE Y+ MW + G P
Sbjct: 625 PGRRAALRKRLEDGRMTVPLFDSHRFTRNLERAYQVMWSLHGAGRPP 671
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P+ E LGV ++ +A + A+S++ + + S NLG V G+M A
Sbjct: 51 PNQGEILQLLGVSVMMQNRPQEAESILRQAISVRSDLADSHGNLGTVLQSLGRMGEALAA 110
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
++ + P AE Y N G G A + + L++ P A N +A+
Sbjct: 111 HDRCVLLGPAAAEGYINRGSARLTLGDRDGAATDFARALRLRPIDALAAANLGVAL---R 167
Query: 149 EGHDDKLFEAHR 160
EGH ++ EA R
Sbjct: 168 EGH--RVAEAER 177
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
L+ PN + L LGV +Q + A ++ +AI+ A+++ NLG + + G +
Sbjct: 47 LNAVPNQGEILQLLGVSVMMQNRPQEAESILRQAISVRSDLADSHGNLGTVLQSLGRMGE 106
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
A+ A+++C+ + P + A YIN G
Sbjct: 107 ALAAHDRCVLLGPAA---------AEGYINRG 129
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A++ NLG + + + +A+ + + + P ++ N G G D AA +
Sbjct: 88 ADSHGNLGTVLQSLGRMGEALAAHDRCVLLGPAAAEGYINRGSARLTLGDRDGAATDFAR 147
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A+ P A A NLGV R+ ++ A A + L DP
Sbjct: 148 ALRLRPIDALAAANLGVALREGHRVAEAERALRRALIADP 187
>gi|427406427|ref|ZP_18896632.1| hypothetical protein HMPREF9161_00992 [Selenomonas sp. F0473]
gi|425708246|gb|EKU71286.1| hypothetical protein HMPREF9161_00992 [Selenomonas sp. F0473]
Length = 917
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 192/363 (52%), Gaps = 13/363 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YFI L D +++V YS + K D T F+ V WRD
Sbjct: 556 IGYISGDFREHVMQYFIWPFLAGFDRDSFEVYCYS-LGKTDQYTEFFKTLVTA----WRD 610
Query: 248 IYGIDEKKVAAMVR--EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ R D++DIL +L GHTA + L +A +PAPVQV+ +GY TTGL
Sbjct: 611 VSADAAAPAKIAARIYADEVDILFDLAGHTARSGLPALAWKPAPVQVSGLGYMATTGLRA 670
Query: 306 IDYRITDSLADPPE--TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DPP T VE+L+RL F CY TPA G+I SF
Sbjct: 671 VDYFVTDRYCDPPGAGTDIYFVEKLLRLTSQF-CYNGYTHLPASEGTPARRRGYIQLASF 729
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N KIT ++L+VWA IL +P +RL++K + V +++LGL+ RV
Sbjct: 730 NQYVKITDEMLRVWAEILRRLPTARLLLKNAAYAKKGVVRAAHDRMKRLGLDMSRVQFE- 788
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
D+M Y +DI+LDTFP+ G TTC++LYMGVP V+ H+ SLL +
Sbjct: 789 --RATRDYMLRYLDVDIALDTFPWPGGGTTCDALYMGVPVVSYYTERHSTRFTYSLLANI 846
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L ++ +YV+ A+ LA ++ L L LRD M SP+ D + + +E YR++
Sbjct: 847 GLGDLASERLSDYVETAVMLAGNLDLLDALHRELRDRMRVSPMMDQERYIREMEGCYRDI 906
Query: 544 WHR 546
W R
Sbjct: 907 WAR 909
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 139/362 (38%), Gaps = 44/362 (12%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
R + +GY+S + + + F+ A + D + +++ Y + D E K+
Sbjct: 22 RKIRVGYLSDAFGSGAWRTFLPAFFLGADRKRFELYAYHTGPEGDT------ELFAKEAA 75
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
+R + ++ A ++R D ID+LV+L+ P ++ + +P L
Sbjct: 76 AFRTLGAYTAREAAEIIRRDAIDLLVDLSAD----------APPPLIREIFAAHP-ARHL 124
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP-SPEAGPVCPTPALTNGFITFGS 362
+I R L D + + + + LCYTP P V TP L G T G
Sbjct: 125 VSIAERRPAELVDALPSVDGYADFVP------LCYTPLDPPKNYVFRTPLLERGTATIGF 178
Query: 363 FNNLAK-ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
+ + +++ + + ++P+ RL++ P V L+ + + D
Sbjct: 179 VGRADETLREEIVALCCALFSSIPDVRLIL---PAEIGGV----LTDADIERAAEMGTDA 231
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVT---MAGSVHAHNVGVS 478
L L + +Y +DI++ A C +L VP +T AG +A +
Sbjct: 232 AELFLADE---ISYEELDIAIGI--AADPAQICRTLEYAVPLLTAHPFAGGAYAAGI--- 283
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
L V IA + A L D L+ L LR + SP+ D + +E
Sbjct: 284 -LAAVEPDEEIAADTSALAVRAGVLLRDAARLSELHELLRWNLHDSPLADSGAYMFTVER 342
Query: 539 TY 540
Y
Sbjct: 343 AY 344
>gi|358635262|dbj|BAL22559.1| hypothetical protein AZKH_0213 [Azoarcus sp. KH32C]
Length = 660
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 262/553 (47%), Gaps = 18/553 (3%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+G + ++ ++DMA+ +E AE + +G+ + + A + Y+ AL
Sbjct: 116 NMGWCFIQLDQYDMALQVFEAYLEDFAANAEVYSLIGIARQGLQDSAAAADAYRKALEFG 175
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P NLG V AAE +A+ A NLG G I A
Sbjct: 176 PGDYTLHLNLGSCLHVLHDYRGAAEHAARALDFQRDDPVARFNLGTALFALGEIDKARGT 235
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ---YTSWDNT 179
+E + + A +RL A++Y+ ++L HR WG + T
Sbjct: 236 WEGVPRPE-----ATLSRLAALSYLEPFDGERLLAEHRAWGNALAAACAAEPALTPPMPA 290
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
P L +G+VSPD+ H V++F+E L + D + +++ +Y D T RF+
Sbjct: 291 PGPRPKLRLGFVSPDFREHPVAFFLEGLLRHIDRERFELFLYFDAPNRDEVTARFQ---- 346
Query: 240 KKGGIWRDIYGI-DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
W ++Y D + A +R D++DIL +L G T + ++ M + A VQ +++GY
Sbjct: 347 MLADAWIELYPTRDPRDAAQRIRADQVDILFDLAGMT-SPRIEMFGRRIALVQTSYLGYA 405
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEE-LIRLPECFLCYTPSPEAGPV-CPTPALTNG 356
+TTG+PTIDY ++D+ DPP + H E L+RL CF YTP P P+ P G
Sbjct: 406 STTGVPTIDYVLSDARLDPPGRTEAHYSETLVRLGNCFATYTP-PSGAPLPAGRPMKRKG 464
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+ F S L+KI+ L +W L +VP++RL++ + + + L L + +
Sbjct: 465 YPVFASVARLSKISDGALDLWCAALRSVPDARLLILAQGLHHAATQAALLERLTRRRVAP 524
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
RV+L + + ++++ +S +D+ LDT P++G TTT L+MGVP VT + HA
Sbjct: 525 ERVELRGSVPME-EYLELHSDVDLMLDTTPWSGHTTTLHGLWMGVPTVTFEQAHHAGRFT 583
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
++ GL +A++ + + + +L +D + +R R+L+ SP+ D A
Sbjct: 584 TMVMESAGLPEFVARDAEGFGEHVRRLLTDDALMDRVRAEGRELVRSSPLMDHAGLARAF 643
Query: 537 ESTYRNMWHRYCK 549
E+ MW Y K
Sbjct: 644 EAACSAMWDAYAK 656
>gi|257092158|ref|YP_003165799.1| TPR repeat-containing protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044682|gb|ACV33870.1| TPR repeat-containing protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 597
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 158/566 (27%), Positives = 260/566 (45%), Gaps = 54/566 (9%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P + N +G A Y+ AL+++P+ +LNNL V+ G+ + A
Sbjct: 34 QPRQPDTWNLMGATLAGLRRYPDAENAYRRALALQPDHLGALNNLAVLLRQTGRAEEARR 93
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD--------------- 132
+ + P + +A+NNL L+ A+ Y + L++ PD
Sbjct: 94 TYLETLRHEPRHVDAWNNLAALHAARQEYDQALTCYRKVLELQPDYGHALGAAANAMAML 153
Query: 133 ----SRNAGQNRL---------LAMNYINEGHDDK---LFEAHRDWGKRFMRL-YSQYTS 175
R + RL + + ++ H D+ R W +RF +
Sbjct: 154 WEWSGRASICQRLADGIRAGASVTVPFVVLSHLDEPELQLAGARAWARRFDAVAMGPLPV 213
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKV--VVYSAVVKADAKTIR 233
W + + L + Y+S D H V I + HD + ++ V + V DA R
Sbjct: 214 WQHDR-----LRVAYLSADLREHPVGLQIAELIERHDRRQFEWFGVYFGPRVPGDATHRR 268
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
R + DI + +++ A +R +IDILV+L GHT + + G++A +PAP+QV
Sbjct: 269 LRLAFDS----FLDIARLSDEEAARRLRALEIDILVDLGGHTLDGRPGLVARRPAPIQVN 324
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF-LCYTPSPEAGPVCPTPA 352
W+GYP T+G IDY + D PPE++ + E ++ LP+CF + + P AG V
Sbjct: 325 WLGYPGTSGASWIDYIVADRFLVPPESRSGYSERIVYLPDCFWVSDSQRPAAGRVPERVE 384
Query: 353 L---TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLST 408
L GF+ F F++ K+ P + VW R+L V S L ++ KP R
Sbjct: 385 LALPAEGFV-FCCFSHSYKLNPAMFAVWMRLLRQVAGSVLWLLAAKP----EAEERLRRE 439
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
++ G++ R+ P I L H+ ++ D+ LDT P+ TTT +L+ G+P ++ +G
Sbjct: 440 ADRCGVDPTRLVFAPRIDLA-AHLARHAQADLFLDTLPFNAITTTSVALHAGLPVLSCSG 498
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A SLL VG+ L+ N +Y AL+LA+ LA+LR +L + + P+ D
Sbjct: 499 RSFAARGAGSLLQAVGMSALVTGNLSDYEARALELATHPERLASLRRALAERLQTGPLFD 558
Query: 529 GQNFALGLESTYRNMWHRYCKGDVPS 554
+ F LE+ YR MW R+ G+ P+
Sbjct: 559 AERFRRHLEAAYRAMWTRWQGGEAPA 584
>gi|40063048|gb|AAR37904.1| TPR domain protein [uncultured marine bacterium 560]
Length = 732
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 172/595 (28%), Positives = 270/595 (45%), Gaps = 63/595 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E+ + D+A+ YE A P AE NNLG + LD+AV+CY+ A++IK
Sbjct: 148 NLGNALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQLDEAVKCYEQAIAIK 207
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ NNLG+ G++DAA + EKA+A P +AEAY N G + + + A+ +
Sbjct: 208 PDYAEAHNNLGISLRELGQVDAAVKSYEKALAIKPDFAEAYYNRGNVLKGLKRLDEALVS 267
Query: 123 YEQCLKIDPDSRNAGQNRLLAM----------NYINE-----GHDDKLF----------- 156
+ + + PD + L N+INE + +K+
Sbjct: 268 LNRAIVLKPDIDFILGDLLHTKMDLCIWDDLSNHINEITKKINNSEKVIHPFPMLALIDE 327
Query: 157 -EAHRDWGKRFM-RLYSQYTSWDNTKD--PERPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
E R + F YSQ + + + IGY S D+ H VS+ HD
Sbjct: 328 PEVQRKTAEIFANEKYSQSHLLSKIERYPKHKKIRIGYFSADFRDHPVSHLTAELYEIHD 387
Query: 213 YQNYKVVVYS-AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVEL 271
+++ +S D +R + V + D+ + K+V + R +IDI V+L
Sbjct: 388 RNQFEIYAFSFGPDTQDEMNLRIKAGVDH----FHDVRSMSHKEVVMLARSLEIDIAVDL 443
Query: 272 TGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRL 331
TG T N + + A AP+Q+++IGY T G DY + D P+ QK+ E I
Sbjct: 444 TGFTQNARTEIFAMSVAPIQISYIGYIGTMGANYYDYLVADQTM-IPKKNQKYFSEKI-- 500
Query: 332 PECFLCYTPSPEAGPVCPTP----------ALTNGFITFGSFNNLAKITPKVLQVWARIL 381
Y PS +A +P L F FNN KITP W RIL
Sbjct: 501 -----AYLPSYQANDSTQSPPEIFFTRQDLGLPETGFVFCCFNNTFKITPTTFDSWGRIL 555
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLM 438
V S L++ +S + + G++ R+ + LP+ +++ Y ++
Sbjct: 556 EHVEGSVLLIYAN---NESAKLNLTKEIVLRGIDPSRLIFGEKLPM----SEYLARYRVV 608
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D+ LDT PY T +L MG+P +T G+ A +G S++ V L LI + EY
Sbjct: 609 DLFLDTHPYNAGTIASGALRMGLPVLTCIGNSFASRMGASVINAVNLPELITSTQKEYES 668
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
LA++LA+ L ++ L + +P+ D F LES Y M+ RY +G P
Sbjct: 669 LAIELATHPEQLKIIKDKLASNLPTAPLYDTPLFTRHLESAYLTMYDRYQQGLEP 723
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 84/138 (60%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV E+ + D A+ YE A P AEA NNLG K+ LD AV+ Y+ A++IK
Sbjct: 114 NLGVTLKELEQLDAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIK 173
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+++ NNLG G++D A + E+AIA P YAEA+NNLG+ R+ G + A+ +
Sbjct: 174 PDFAETHNNLGNALQGLGQLDEAVKCYEQAIAIKPDYAEAHNNLGISLRELGQVDAAVKS 233
Query: 123 YEQCLKIDPDSRNAGQNR 140
YE+ L I PD A NR
Sbjct: 234 YEKALAIKPDFAEAYYNR 251
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 83/138 (60%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ + E+ + D A+ YE NP AEA NNLGV K+ + LD AV+ Y+ A++I
Sbjct: 79 YNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAI 138
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+++++ NNLG G++D A + EKAIA P +AE +NNLG + G + A+
Sbjct: 139 KPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQLDEAVK 198
Query: 122 AYEQCLKIDPDSRNAGQN 139
YEQ + I PD A N
Sbjct: 199 CYEQAIAIKPDYAEAHNN 216
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
Query: 1 MYNL-GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL 59
+YN+ GV Y + + D+A+ +E A P E NLG+ +++ LD AV+CY+ L
Sbjct: 43 LYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEVNYNLGLTFQELGQLDAAVKCYEDVL 102
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
++ P +++ NNLGV ++DAA + EKAIA P YAEA+NNLG ++ G + +A
Sbjct: 103 AVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVA 162
Query: 120 IDAYEQCLKIDPD---SRNAGQNRLLAMNYINEG 150
+ +YE+ + I PD + N N L + ++E
Sbjct: 163 VKSYEKAIAIKPDFAETHNNLGNALQGLGQLDEA 196
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN N GV Y G++D A + EKA+A P Y E NLG+ +++ G + A+
Sbjct: 38 PNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEVNYNLGLTFQELGQLDAAVKC 97
Query: 123 YEQCLKIDPDSRNAGQN 139
YE L ++P+ A N
Sbjct: 98 YEDVLAVNPEHAEAHNN 114
>gi|429736729|ref|ZP_19270617.1| hypothetical protein HMPREF9163_01491 [Selenomonas sp. oral taxon
138 str. F0429]
gi|429154357|gb|EKX97091.1| hypothetical protein HMPREF9163_01491 [Selenomonas sp. oral taxon
138 str. F0429]
Length = 905
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 197/364 (54%), Gaps = 13/364 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YFI L D +++V VYS + + D + F+ V WRD
Sbjct: 544 IGYISGDFRQHVMQYFIWPFLAGFDQGSFEVYVYS-LGEPDQFSQFFQTLVT----CWRD 598
Query: 248 IY--GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ +D K+A + D+IDIL +L GHTA + L +A +PAP+Q++ +GY TTGLP
Sbjct: 599 LSDCNMDMAKIAGKIYRDEIDILFDLAGHTAESGLAALAWKPAPIQLSGLGYMATTGLPA 658
Query: 306 IDYRITDSLADPPE--TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DP ++Q +VE+L+RL F CY PA +I F SF
Sbjct: 659 VDYFVTDHYCDPEGGGSEQVYVEKLLRLTSQF-CYNGYTHLPASDGAPARHREYILFASF 717
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N KI +L W +I+ +PNSRL++K + V L+++G + RV P
Sbjct: 718 NQYRKIRDDMLVAWRQIMERIPNSRLLLKNSAYQQPGVAMTAYKRLKEMGFDMSRVTFEP 777
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
D+M Y +DI+LDTFP+ G TTC++LYMGVP ++ H+ S+L +
Sbjct: 778 G---TKDYMMRYLDVDIALDTFPWPGGGTTCDALYMGVPVISYYTERHSTRFSYSILANM 834
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L ++ ++Y++ A+ LA ++ L L LR M SPV D + + +E YR +
Sbjct: 835 GLAELASERMEDYIETAVALAGNLDLLDALHRELRPRMKASPVMDQEGYIREMEECYREI 894
Query: 544 WHRY 547
W ++
Sbjct: 895 WAQW 898
>gi|292670018|ref|ZP_06603444.1| TPR domain/SEC-C domain protein [Selenomonas noxia ATCC 43541]
gi|292648319|gb|EFF66291.1| TPR domain/SEC-C domain protein [Selenomonas noxia ATCC 43541]
Length = 909
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 198/364 (54%), Gaps = 13/364 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YF+ L D ++V VYS + K+D + F+ V K WRD
Sbjct: 548 IGYISGDFRQHVMQYFVWPFLAGFDRTQFEVYVYS-LGKSDQYSKFFQTLVTK----WRD 602
Query: 248 I--YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ D +++A + D++DIL +L GHT+++ L +A +PAPVQ++ +GY TTGLP
Sbjct: 603 FSDHTRDMERIAREIHADEVDILFDLGGHTSDSGLAALAWKPAPVQISGLGYMATTGLPA 662
Query: 306 IDYRITDSLADP--PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DP +++ +VE+L+RL F CY TPA T G++ F SF
Sbjct: 663 VDYFVTDHFCDPEGSGSERVYVEKLLRLTSQF-CYNGYTHLPASAGTPARTKGYVQFASF 721
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N K+ +L W I+ VP +RL++K + + L++LG + RV
Sbjct: 722 NQYLKLHDAMLHAWRGIMERVPTARLLLKNSDYGRPGIAVLAHDRLKRLGFDMSRVQFEG 781
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
+ D+M Y +DI+LDTFP+ G TTC++LYMGVP V+ H+ SLL +
Sbjct: 782 A---SRDYMLRYLDVDIALDTFPWPGGGTTCDALYMGVPVVSYYTDRHSTRFTYSLLANM 838
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L + ++Y++ A LA ++ L L LR M SPV D + + +E YR +
Sbjct: 839 GLAELASDRLEDYIETAAALAGNLDLLDALHRELRPRMKASPVMDQERYIREMEECYRAI 898
Query: 544 WHRY 547
W ++
Sbjct: 899 WAQW 902
>gi|365971159|ref|YP_004952720.1| hypothetical protein EcWSU1_02868 [Enterobacter cloacae EcWSU1]
gi|365750072|gb|AEW74299.1| hypothetical protein EcWSU1_02868 [Enterobacter cloacae EcWSU1]
Length = 1126
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 224/423 (52%), Gaps = 20/423 (4%)
Query: 139 NRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQY---TSWDNTKDPERPLVIGYVSPDY 195
N L M++ + L E H ++G+R ++ +N+++P+R L +G+VS D
Sbjct: 706 NLLFVMSHDASVTAETLLEKHLEYGRRAATWATESGVKLVLNNSREPQRKLRLGFVSGDL 765
Query: 196 FTHSVSYFIEAPLVYHDYQN---YKVVVYSAV-VKADAKTIRFREKVMKKGGIWRDIYGI 251
H V+ F+ L Y D N Y +V YS + ++ D R+ +WR + I
Sbjct: 766 RKHPVANFL---LPYWDAINREQYDLVAYSTLFLEEDDTYCHLRQSAT----LWRQVDAI 818
Query: 252 DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDY-RI 310
+ ++A ++ ED IDIL +L+GHTA N+L + A +PAP+Q+TWIGYP TTGL +DY +
Sbjct: 819 SDIELAKLIAEDGIDILFDLSGHTAYNRLPVFALRPAPIQITWIGYPGTTGLKEMDYILL 878
Query: 311 TDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKIT 370
+ SLA E +++ VE + + + P P + + P PAL NG+ITF SFN KI
Sbjct: 879 SASLAQSQELEKQLVENAMFVA-TRKSFEPHPLSPDINPLPALRNGYITFASFNRSKKIN 937
Query: 371 PKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430
+VL WA IL P +RL++ + L+Q G+ R+ L+ ++ +
Sbjct: 938 DQVLNAWASILTGYPEARLLI--GNMTDAEMISAMTKRLQQRGISRDRLLFRGLVEMD-E 994
Query: 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA 490
++ + +DI LD FPY+G TTT +MG+P +T+ G+ GV ++ L+ IA
Sbjct: 995 YLAMHHEIDILLDAFPYSGGTTTHHGAWMGIPTLTLNGTTIPCQQGVEIMRSYKLEEFIA 1054
Query: 491 KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
+ ++Y++ A+ + LA +R ++R +S D N E+ R W YC+G
Sbjct: 1055 SDVEDYIKKAINWRDQIPKLAEIRSAMRSRISPGADYD-LNCTEHFETALRKAWGIYCRG 1113
Query: 551 DVP 553
++P
Sbjct: 1114 ELP 1116
>gi|422343492|ref|ZP_16424420.1| hypothetical protein HMPREF9432_00480 [Selenomonas noxia F0398]
gi|355378799|gb|EHG25979.1| hypothetical protein HMPREF9432_00480 [Selenomonas noxia F0398]
Length = 909
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 198/364 (54%), Gaps = 13/364 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YF+ L D ++V VYS + K+D + F+ V K WRD
Sbjct: 548 IGYISGDFRQHVMQYFVWPFLAGFDRTQFEVYVYS-LGKSDQYSKFFQTLVTK----WRD 602
Query: 248 I--YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ D +++A + D++DIL +L GHT+++ L +A +PAPVQ++ +GY TTGLP
Sbjct: 603 FSDHTRDMERIAREIHADEVDILFDLGGHTSDSGLAALAWKPAPVQISGLGYMATTGLPA 662
Query: 306 IDYRITDSLADP--PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DP +++ +VE+L+RL F CY TPA T G++ F SF
Sbjct: 663 VDYFVTDHFCDPEGSGSERVYVEKLLRLTSQF-CYNGYTHLPASAGTPARTKGYVQFASF 721
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N K+ +L W I+ VP +RL++K + + L++LG + RV
Sbjct: 722 NQYLKLHDAMLHAWRGIMERVPTARLLLKNSDYGRPGIAVLAHDRLKRLGFDMSRVQFEG 781
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
+ D+M Y +DI+LDTFP+ G TTC++LYMGVP V+ H+ SLL +
Sbjct: 782 A---SRDYMLRYLDVDIALDTFPWPGGGTTCDALYMGVPVVSYYTDRHSTRFTYSLLANM 838
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L + ++Y++ A LA ++ L L LR M SPV D + + +E YR +
Sbjct: 839 GLAELASDRLEDYIETAAALAGNLDLLDALHRELRPRMKASPVMDQERYIREMEECYRAI 898
Query: 544 WHRY 547
W ++
Sbjct: 899 WAQW 902
>gi|381159636|ref|ZP_09868868.1| glycosyl transferase group 1, partial [Thiorhodovibrio sp. 970]
gi|380877700|gb|EIC19792.1| glycosyl transferase group 1, partial [Thiorhodovibrio sp. 970]
Length = 772
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 207/398 (52%), Gaps = 3/398 (0%)
Query: 67 QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQC 126
Q L++ G + G + A +A++ P + L + R+ G+ + A + Y +
Sbjct: 376 QLLDDPGELLNQFGFLSEAEASCRQALSLAPKDLRPWVTLANVERERGNHAAAHNHYARL 435
Query: 127 LKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD-PERP 185
PD +N L+ Y D + A R WG + K ERP
Sbjct: 436 QSQLPDHPVIRRNLLVGQEYDPAISDTERLTAARAWGDWAIARAGGPRPRPALKPLRERP 495
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GYVS D H+V ++ L HD + V YSA D + GG +
Sbjct: 496 LRLGYVSADLCQHTVGLLLKPVLAAHDPERVTVFAYSAGTLKDWVSQAITASCCATGGEF 555
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
RD+ +D+ +A ++ D+ID+L++L+GHTA ++L + A +PAPVQV+W+GY TTGL
Sbjct: 556 RDVASLDDPALAQRIQADQIDLLIDLSGHTAGSRLSVFAHRPAPVQVSWLGYFATTGLTE 615
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP-VCPTPALTNGFITFGSFN 364
+D + D+ PP T+ + +E ++ LP CY P P A + P P + ITFGSFN
Sbjct: 616 MDAVLLDAWHAPPGTEDQFIEPILPLPAGRFCYQPVPWAPKDLSPPPVAHSARITFGSFN 675
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
N AK+ V +WA+IL AVP+SRL++K + F ++R R G+ + R++L
Sbjct: 676 NTAKLNDGVYDLWAQILAAVPDSRLLLKWRTFNDAALRQRVTQAFVARGIAAERIELRGP 735
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVP 462
+ D ++ Y+ +DI+LD FP+ G T+CE+L+MGVP
Sbjct: 736 S-FHADLLKEYTELDIALDPFPFTGGLTSCEALWMGVP 772
>gi|160896065|ref|YP_001561647.1| hypothetical protein Daci_0616 [Delftia acidovorans SPH-1]
gi|160361649|gb|ABX33262.1| Tetratricopeptide TPR_2 repeat protein [Delftia acidovorans SPH-1]
Length = 974
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 249/511 (48%), Gaps = 15/511 (2%)
Query: 49 DKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
++A+E + AL I+P+ +++ V G + + +A+ P E
Sbjct: 453 EQALELLEEALRIEPDNARAHMLRCQVLLETGDLPRLDRALNEALERLPGDRELMFQRAA 512
Query: 109 LYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMR 168
+ G + ++ +K+ PD A RL AM + E + A+R++G MR
Sbjct: 513 YWDRCGDAQRHMQQLDELVKLHPDYEPAYSARLFAMIHSPEASAASVGRANREYGA-LMR 571
Query: 169 LYS---QYTSWDNTKDPERPLVIGYVSPDYFTHSVS-YFIEAPLVYHDYQNYKVVVYSAV 224
+S Q T DN +DP + L +G+VS D H+ + +F+ + + V Y
Sbjct: 572 RHSAGKQGTGHDNARDPGKTLRLGFVSGDLRAHAAAKFFLPVMRELSRHSDLVCVAYCNN 631
Query: 225 VKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMA 284
D T F+ +WR I ++ + ++ +VR D IDIL++L+GHT ++L + A
Sbjct: 632 EIHDEVTKEFQGLFQ----LWRGIRDMNAQSLSNLVRADGIDILIDLSGHTRGHRLDLFA 687
Query: 285 CQPAPVQVTWIGYPNTTGLPTIDYRI-TDSLADPPETKQKHVEELIRLPECFLCYTPSPE 343
+PAP+Q+TWIG P +TGL ++DY + +D + + K + E L+R+P ++ +
Sbjct: 688 AKPAPLQMTWIGNPGSTGLESMDYIVLSDLILEDELLKTQLTERLMRVPLAYV-FDGGIH 746
Query: 344 AGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH 403
V P PAL NG +TFGSFN L+KI KV+ VW +L +P +RL + P
Sbjct: 747 QEAVAPLPALRNGHLTFGSFNRLSKINRKVVSVWGEVLRTLPTARLKIAACPRSGPPQHL 806
Query: 404 RFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC 463
R L + G+ + RVD + + H +++A+ +DI LDT P+ G T +L+MGVP
Sbjct: 807 R--EWLAEEGVAAQRVDFVEQMGFEH-YLRAHHDIDICLDTLPFTGGVVTNHALWMGVPT 863
Query: 464 VTMAGSVHAHNVGVSLLTKVGLKH-LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMS 522
+T+ G + A ++ +VGL A++ + + A + + L +R LR+ +
Sbjct: 864 LTLMGELLAGRQSAEVMARVGLDQGFAARDLAQLLDQAAFWQAHLPQLQQIRQGLRERLQ 923
Query: 523 KSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A + R W R+C+G P
Sbjct: 924 DQEPQQADIVARSVAMGMRQAWARWCQGQEP 954
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 45/107 (42%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
PH A ++LG +D D ++ CY AL + P +L+ L G++ A
Sbjct: 295 LRPHWTRAFSHLGDALCAQDRTDDSLPCYVSALLLDPEDVDTLSRLTAALQKTGRLQECA 354
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ + + P + +AG + A AY L+I+P+S
Sbjct: 355 QFLVLLMQQRPEDLRLCLASAHVLGEAGWVLQAETAYRMALQIEPES 401
>gi|365894014|ref|ZP_09432178.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. STM 3843]
gi|365425213|emb|CCE04720.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. STM 3843]
Length = 742
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 162/554 (29%), Positives = 253/554 (45%), Gaps = 19/554 (3%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G A E+ F +A + A P AE + G ++ D +A Y AL+
Sbjct: 196 LINKGQAQLELRHFAIAEAAFNAALAIRPDNAELLAHRGRLHLLMDRRAEAEADYDAALA 255
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ + + G + A K + NP G G + AI
Sbjct: 256 LDRTLMSGWQGKTELSILNGNLAQAIAACNKLLEQNPRSEVGLTLRGACLGRLGDPAGAI 315
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
++ L+I PD A ++ +++ E R W + + + +
Sbjct: 316 QQFDSALEIRPDYAEAISKKIFYQDFVPESDFAVQQATRRAWWDAYGCKFPRRSLAARPL 375
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
DP + +VIGYVS D+ HS ++ L HD ++V Y++ D+ T FR
Sbjct: 376 DPNKRIVIGYVSSDFRMHSAAFAFLPVLRNHDKTRFQVNCYASSAARDSFTETFRSLA-- 433
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+W D + + ++A ++ D +DILV+L+GHT N+L + A +PAPVQVT G
Sbjct: 434 --DVWVDAAALSDDELADRIQADGVDILVDLSGHTTGNRLNVFARKPAPVQVTAWGNGTG 491
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT--PALTNGFI 358
TGL T+DY D ++ P E + E + LP T P G + P+ P NG +
Sbjct: 492 TGLATMDYIFADPVSIPQEARPLFAETVYDLPSVI---TIDPIVG-LKPSALPMRANGHV 547
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
TFG FN ++KI+ L +W R+L + ++L+VK VR L+ G+ R
Sbjct: 548 TFGVFNRVSKISDSALALWCRLLREIDGAQLIVKDIALSDPMVRDMLLARFLAHGVPDGR 607
Query: 419 VDLLPLILLN----HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
V I L HDH++A++ +DI+LD FP G +T E+LYMGVP V G A
Sbjct: 608 V-----ICLGGSERHDHLRAFAQIDIALDPFPQNGGVSTWEALYMGVPVVAKLGRGAASR 662
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
+ +L +GL +A ++D YV +A + AS L LR L D +++ P D +
Sbjct: 663 MAGGILRAIGLDDWVADDDDGYVAIAKRFASQPDQLEQLRAELPDFIARRPAGDVVLYTQ 722
Query: 535 GLESTYRNMWHRYC 548
+E+ YR W YC
Sbjct: 723 QVEAGYRQFWRDYC 736
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
AY E + D + EL P+C EA + LGV + + + A+++ P
Sbjct: 32 TAYREGRQADAQSLCREL-LQEQPNCFEALHILGVSIVHGGRFAEGLPWLERAVALDPRS 90
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+++ +NLG G+ D A ++KA+A P + A NL A+ A+ +
Sbjct: 91 AEAQSNLGFALLHLGRYDDARRHLQKAVALQPNFPTAQRNLADTLLHLKLPEPALVAFTR 150
Query: 126 CLKIDPDSRNAGQNRLLA 143
+++ PD +A NR +A
Sbjct: 151 AIQLKPDDADAWSNRAVA 168
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV+ +F + + E A +P AEA +NLG D A Q A++
Sbjct: 60 LHILGVSIVHGGRFAEGLPWLERAVALDPRSAEAQSNLGFALLHLGRYDDARRHLQKAVA 119
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PNF + NL + A +AI P A+A++N V G A
Sbjct: 120 LQPNFPTAQRNLADTLLHLKLPEPALVAFTRAIQLKPDDADAWSNRAVAELMLGHWDAAA 179
Query: 121 DAYEQCLKIDP 131
+ E+ L + P
Sbjct: 180 ASSERALALRP 190
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + ++D A + A P+ A NL + A+ + A+ +K
Sbjct: 96 NLGFALLHLGRYDDARRHLQKAVALQPNFPTAQRNLADTLLHLKLPEPALVAFTRAIQLK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
P+ + + +N V + G DAAA E+A+A P + EA N G
Sbjct: 156 PDDADAWSNRAVAELMLGHWDAAAASSERALALRPGHVEALINKG 200
>gi|407772276|ref|ZP_11119578.1| hypothetical protein TH2_00215 [Thalassospira profundimaris WP0211]
gi|407284229|gb|EKF09745.1| hypothetical protein TH2_00215 [Thalassospira profundimaris WP0211]
Length = 629
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/582 (26%), Positives = 267/582 (45%), Gaps = 59/582 (10%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
++ A + +E P ++ NLG+ Y+ ++A++C+Q A++ N++++ N G
Sbjct: 55 YEKATLCFEKVVELAPKSPKSHQNLGMFYQSIGKFNEALQCFQRAVNCDTNYARAYNGAG 114
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
V G++D A + KA+ +P +A+AY+N ++ G A Y + +DP+
Sbjct: 115 NVLVNVGQVDTAQQYFAKALQLDPQFADAYSNFARVFFIKGQFQAAAQGYAKAYSLDPEM 174
Query: 134 RNA--GQNRLLAMNYINEGHDD---------------------KLFEAHRDWGKRFMRL- 169
++A Q AM G+ + KL +A R RL
Sbjct: 175 KSALASQYYSSAMMCDWSGYKEFSKVASTLGIEGEVVSPFPMLKLEDAPERQLVRSRRLV 234
Query: 170 ---YSQYTSWDNTKDPERP--LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAV 224
+ W + +RP L IGY S D+ H+ + L +HD+ +++ +S
Sbjct: 235 TFNFGHGAKWQGARPSKRPGKLRIGYFSADFQDHATLALMMGLLRHHDHDKFEIHGFSYG 294
Query: 225 VKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMA 284
+ +++++ + + + D+ + ++A + R+ +IDI ++L GHT +LG+ A
Sbjct: 295 LIKESRSLDEAKNYLDS---FTDVERASDDEIAELARQKQIDIAIDLKGHTKLGRLGIFA 351
Query: 285 CQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEA 344
+ APVQ+ ++G P T G IDY + D + P KQ E+ I LP CY P+ +
Sbjct: 352 RRVAPVQINYLGNPGTIGADFIDYMVVDKVTVPETHKQYLSEKPIYLP---YCYQPNDDQ 408
Query: 345 GPVCPTP------ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFC 397
+ T L + F SFNN KI+P+ +W R+L V S L + K +
Sbjct: 409 RSIADTKTSRADYGLPDSGFVFCSFNNTYKISPREFDIWMRLLNQVEGSVLWLFKGNDYA 468
Query: 398 CDSVRHRFLSTLEQLGLESLRVDLLPLILL------NHDHMQAYSLMDISLDTFPYAGTT 451
++R E+ + D+ P L+ +H+ D+ LDTF T
Sbjct: 469 AQNLRK-----------EAQKRDVDPDRLICAEKLSQSEHLARQKHGDLLLDTFNVNAHT 517
Query: 452 TTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALA 511
T ++L+ G+P VT+ G A V S+L+ L LIAK+E +Y +AL LA +A
Sbjct: 518 TASDALWAGLPLVTLPGEQFAARVAASILSAANLPELIAKDEADYEAIALDLALYPEKIA 577
Query: 512 NLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L+ L D + P+ D + + LE+ + + RY G P
Sbjct: 578 ALKQKLNDQIKTCPLFDSEGYTRDLEAGFEAAYDRYLSGSAP 619
>gi|334126611|ref|ZP_08500560.1| TPR domain/SEC-C domain protein [Centipeda periodontii DSM 2778]
gi|333391282|gb|EGK62400.1| TPR domain/SEC-C domain protein [Centipeda periodontii DSM 2778]
Length = 906
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 197/365 (53%), Gaps = 17/365 (4%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+S D+ H + YFI L D ++V YS + K D F+ V W
Sbjct: 543 LRIGYISGDFRMHVMQYFIWPFLAGFDPDRFEVYAYS-LGKEDQYAKFFQTLVT----CW 597
Query: 246 RDI--YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
RD+ + D + VA + D++DIL +L GHT+N+ L +A +PAPVQ++ +GY TTGL
Sbjct: 598 RDLSEHARDMEHVARAIYADEVDILFDLAGHTSNSGLAALAWKPAPVQLSGLGYMATTGL 657
Query: 304 PTIDYRITDSLADPPETKQK--HVEELIRLPE--CFLCYTPSPEAGPVCPTPALTNGFIT 359
P +DY +TD DP + + +VE+L+RL C+ YT P + TPA G++
Sbjct: 658 PAVDYFVTDHYCDPEGSGSESVYVEKLLRLTSQFCYNGYTSLPASEG---TPARAKGYVQ 714
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
F SFN AK+ ++L W IL VPN+RL++K + + L++LG + RV
Sbjct: 715 FASFNKYAKLQDEMLLAWRTILERVPNARLLLKNSAYGGRGIAVLAYDRLQRLGFDMSRV 774
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
D+M Y +DI+LDTFP+ G T+C++LYMGVP V+ H+ SL
Sbjct: 775 QFEGA---TSDYMLRYLDVDIALDTFPWPGGGTSCDALYMGVPVVSYYTERHSTRFTYSL 831
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L +GL L ++ +YV+ A+ LA ++ L L LR M SPV D + + +E
Sbjct: 832 LANIGLADLASEQLSDYVETAVALAGNLDLLDALHRELRPRMKASPVMDQERYIREMEEW 891
Query: 540 YRNMW 544
YR +W
Sbjct: 892 YRAIW 896
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 134/341 (39%), Gaps = 52/341 (15%)
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
T++ ER + +GY+S D+ + P + Y + +Y+ T F ++V
Sbjct: 14 TENAERKIRLGYLSSDFGMGRTRDLL--PAFFAAYNKLRFEIYAYHTGMGGDTALFSKEV 71
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKL-GMMACQPAPVQVTWIGY 297
R++ G + A ++R DKID+LV+L+ + + +M PA +
Sbjct: 72 -----TLRELGGAAPAEAAEIIRRDKIDLLVDLSLRMPDETICAIMEMHPAAHVI----- 121
Query: 298 PNTTGLPTIDYRITDSLAD--PPETKQ--KHVEELIRLPECFLCYTP-SPEAGPVCPTPA 352
SLAD P E + VE + LP CYTP P P
Sbjct: 122 ---------------SLADNCPRELAEVLPTVEGEVLLP---YCYTPFDPAHRYTYRAPL 163
Query: 353 LTNGFITFGSFNNLAKITPKVL-QVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
L G G +L L Q+ + +L +P RL++ + + + + +
Sbjct: 164 LDTGVPAIGVSGSLYGDGAAALRQMLSDLLARMPAVRLILPAS--IAEGLSAEDFAQIAE 221
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
LG E +DL+ + Y +DI L + C + GVP + ++ S+
Sbjct: 222 LGTEKSALDLVDEL--------PYDEIDILLGI--HVDLMDVCHAAEHGVPLL-VSESLV 270
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
L+ ++GL A+ ED Q A L +D+ L+
Sbjct: 271 DDRYAAMLMARLGLP-TAARVEDVGAQ-ACALCADLPRLSQ 309
>gi|413936918|gb|AFW71469.1| hypothetical protein ZEAMMB73_864118 [Zea mays]
Length = 706
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 163/613 (26%), Positives = 266/613 (43%), Gaps = 73/613 (11%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A FY+ A + NNL VIYK + N A+ CY L
Sbjct: 91 LTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCYTEVLR 150
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + +L N G + G+++ A + +A P EA+ NL Y+D+G + AI
Sbjct: 151 IDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNMPEAHANLASAYKDSGHVETAI 210
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR--FMRLYSQYTSWD 177
+Y+Q L++ PD A N L + + + + D +F + +R M + +
Sbjct: 211 ISYKQALRLRPDFPEATCNLLHTLQCVCDWENRDGMFRDVEEIIRRQIKMSVLPSVQPFH 270
Query: 178 NTKDPERPLV------------------------------------------IGYVSPDY 195
P PL+ +GYVS D+
Sbjct: 271 AIAYPIDPLLALEISRKYAAHCSLIASRFGLPPFVHPPPVPVKAEGKHCRLKVGYVSSDF 330
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H +S+ + + HD N +V Y A+ + D +R+++ + + D+ +
Sbjct: 331 GNHPLSHLMGSVFGMHDRANIEVFCY-ALSQNDG--TEWRQRIQSEAEHFVDVSAMTSDN 387
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ +DKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 388 IAKLINQDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGAAYIDYLVTDEFV 447
Query: 316 DPPETKQKHVEELIRLPECFL----------CYTPSPEAGPVCPTPALTNGF----ITFG 361
P + E+L+ LP C+ C T PVCP G F
Sbjct: 448 SPSSYAHIYSEKLVHLPHCYFVNDYKQKNRDCLT------PVCPHKRSDYGLPEDKFIFA 501
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
FN L K+ P++ W IL VPNS L + P ++ R + G+ S ++ +
Sbjct: 502 CFNQLYKMDPEIFDTWCNILKRVPNSALWLLRFPAAGET---RVRAYAAARGVRSDQI-V 557
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ + ++H++ +L D+ LDT TT + L+ G+P +T+ A V SL
Sbjct: 558 FTDVAMKNEHIRRSALADLFLDTPLCNAHTTGTDILWAGLPMITLPLEKMATRVAGSLCV 617
Query: 482 KVGL-KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
GL + +I + +Y A++LA + L L L+++ P+ D + LE Y
Sbjct: 618 ATGLGEEMIVSSMKKYEDRAVELALNPVKLQALTNKLKEVRMTCPLFDTARWVRNLERAY 677
Query: 541 RNMWHRYCKGDVP 553
MW+ YC P
Sbjct: 678 YKMWNLYCSSRHP 690
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + DMAI Y A ++P EA NN+G KD +++A+ CY+ L+++
Sbjct: 25 NLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINCYRSCLALQ 84
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y + AA + AI+ + NNL V+Y+ G+ + AI
Sbjct: 85 ANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC 144
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + +A NR
Sbjct: 145 YTEVLRIDPTAADALVNR 162
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A+ CYQ AL +P+++ + NL +Y QG++D A +AI +P + EAYNN+G
Sbjct: 5 AIMCYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNAL 64
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+DAG + AI+ Y CL + + A N
Sbjct: 65 KDAGRVEEAINCYRSCLALQANHPQALTN 93
>gi|293334567|ref|NP_001167956.1| uncharacterized protein LOC100381672 [Zea mays]
gi|223945123|gb|ACN26645.1| unknown [Zea mays]
Length = 1009
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 163/613 (26%), Positives = 266/613 (43%), Gaps = 73/613 (11%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A FY+ A + NNL VIYK + N A+ CY L
Sbjct: 394 LTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCYTEVLR 453
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + +L N G + G+++ A + +A P EA+ NL Y+D+G + AI
Sbjct: 454 IDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNMPEAHANLASAYKDSGHVETAI 513
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR--FMRLYSQYTSWD 177
+Y+Q L++ PD A N L + + + + D +F + +R M + +
Sbjct: 514 ISYKQALRLRPDFPEATCNLLHTLQCVCDWENRDGMFRDVEEIIRRQIKMSVLPSVQPFH 573
Query: 178 NTKDPERPLV------------------------------------------IGYVSPDY 195
P PL+ +GYVS D+
Sbjct: 574 AIAYPIDPLLALEISRKYAAHCSLIASRFGLPPFVHPPPVPVKAEGKHCRLKVGYVSSDF 633
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H +S+ + + HD N +V Y A+ + D +R+++ + + D+ +
Sbjct: 634 GNHPLSHLMGSVFGMHDRANIEVFCY-ALSQNDG--TEWRQRIQSEAEHFVDVSAMTSDN 690
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ +DKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 691 IAKLINQDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGAAYIDYLVTDEFV 750
Query: 316 DPPETKQKHVEELIRLPECFL----------CYTPSPEAGPVCPTPALTNGF----ITFG 361
P + E+L+ LP C+ C T PVCP G F
Sbjct: 751 SPSSYAHIYSEKLVHLPHCYFVNDYKQKNRDCLT------PVCPHKRSDYGLPEDKFIFA 804
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
FN L K+ P++ W IL VPNS L + P ++ R + G+ S ++ +
Sbjct: 805 CFNQLYKMDPEIFDTWCNILKRVPNSALWLLRFPAAGET---RVRAYAAARGVRSDQI-V 860
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ + ++H++ +L D+ LDT TT + L+ G+P +T+ A V SL
Sbjct: 861 FTDVAMKNEHIRRSALADLFLDTPLCNAHTTGTDILWAGLPMITLPLEKMATRVAGSLCV 920
Query: 482 KVGL-KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
GL + +I + +Y A++LA + L L L+++ P+ D + LE Y
Sbjct: 921 ATGLGEEMIVSSMKKYEDRAVELALNPVKLQALTNKLKEVRMTCPLFDTARWVRNLERAY 980
Query: 541 RNMWHRYCKGDVP 553
MW+ YC P
Sbjct: 981 YKMWNLYCSSRHP 993
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +DM I E A +PH AE N+ +K++ ++D A+ Y A+ ++P
Sbjct: 125 LGAIYYQIRNYDMCIAKNEEALAIDPHFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRP 184
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL YT +G+++ AA+ +A+A NP +A++NLG L + G I A Y
Sbjct: 185 NFCDAWSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCY 244
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
+ L+IDP A N LA ++ G DK
Sbjct: 245 IEALRIDPHFAIAWSN--LAGLFMEAGDLDK 273
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + DMAI Y A ++P EA NN+G KD +++A+ CY+ L+++
Sbjct: 328 NLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINCYRSCLALQ 387
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y + AA + AI+ + NNL V+Y+ G+ + AI
Sbjct: 388 ANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC 447
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + +A NR
Sbjct: 448 YTEVLRIDPTAADALVNR 465
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E D A+++Y+ A P A+A N G +YK A+ CYQ AL +
Sbjct: 260 NLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCYQRALQAR 319
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NL +Y QG++D A +AI +P + EAYNN+G +DAG + AI+
Sbjct: 320 PDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINC 379
Query: 123 YEQCLKIDPDSRNAGQN 139
Y CL + + A N
Sbjct: 380 YRSCLALQANHPQALTN 396
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A +PH A A +NL ++ + +LDKA+ Y+ A+ +KP+F+ + N G VY G
Sbjct: 244 YIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALG 303
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A ++A+ A P YA AY NL +Y + G + +AI Y Q + DP
Sbjct: 304 MPQDAIMCYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDP 354
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y A P+ +A +NL Y + L++A +C + AL+I
Sbjct: 158 NMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAIN 217
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ +P +A A++NL L+ +AG + A+
Sbjct: 218 PRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMY 277
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
Y++ +K+ P +A Y+N+G+
Sbjct: 278 YKEAVKLKPSFADA---------YLNQGN 297
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A A NP +A +NLG + K + + +A CY AL I
Sbjct: 192 NLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRID 251
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NL ++ G +D A ++A+ P++A+AY N G +Y+ G AI
Sbjct: 252 PHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMC 311
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y++ L+ PD A N LA Y +G D
Sbjct: 312 YQRALQARPDYAMAYGN--LATIYYEQGQLD 340
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K+ A+ + + NP + LG IY N D + + AL+I P+F++ N+
Sbjct: 100 KYREALEHGNVVYEKNPRRTDNLLLLGAIYYQIRNYDMCIAKNEEALAIDPHFAECYGNM 159
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP- 131
+ +G +D A AI P + +A++NL Y G ++ A Q L I+P
Sbjct: 160 ANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAINPR 219
Query: 132 --DSRNAGQNRLLAMNYINEGH 151
D+ + N + A +I E +
Sbjct: 220 LVDAHSNLGNLMKAQGFIQEAY 241
>gi|383755459|ref|YP_005434362.1| hypothetical protein SELR_26310 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367511|dbj|BAL84339.1| hypothetical protein SELR_26310 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 481
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 245/489 (50%), Gaps = 35/489 (7%)
Query: 73 GVVYTVQGKMDAAAEMI--EKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
G + + K+D + E+ + Y +++L DA ++ A QC +
Sbjct: 15 GRTHAARAKLDGLRGQVPPEEEWRLHELYGAVFHDLA----DAEGVAAAYSNAAQCDRFL 70
Query: 131 PDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK-DPERPLVIG 189
R N L A++Y+ H L+E H K + +LY + P L IG
Sbjct: 71 RSQRQHYSNYLFALHYLPGLHGADLWEQH----KFYQQLYRDEEMLPPRRIAPHSRLRIG 126
Query: 190 YVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIY 249
+++ D+ + + F EA + D + +Y+ + D+ F ++ G ++R +
Sbjct: 127 FMANDFCDSAAARFYEALVTGLDVRYADTYLYALEDEEDS----FTHRLQGGGLVYRCLA 182
Query: 250 GIDEKKVAAMVREDKIDILVELTGHTANN-KLGMMACQPAPVQVTWIGYPNTTGLPTIDY 308
G + +++A VR D+IDILV+L+GHTA L ++A +PAPVQ+T IGY +TTGL +D
Sbjct: 183 GKNLREMAEAVRWDEIDILVDLSGHTAGGLTLMVLAQKPAPVQITAIGYFDTTGLEAVDG 242
Query: 309 RITDSLADPPETKQKHVEE-LIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLA 367
+TD++ DP E Q E L+ LP+ F C+TPSP V P L +T G+F N
Sbjct: 243 LLTDAILDPSENDQSFFSEGLLYLPQAF-CFTPSPAMVRVKRRPRLKRP-LTLGAFQNGM 300
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR--HRFLS---TLEQLGLESLRVDLL 422
K+ + L +W I+ ++RL+ C D+ R R L+ LE+ GL RV++
Sbjct: 301 KLNNEALALWREIMEICSDARLI------CQDTTRLPERRLALERRLEKAGLPMERVEVR 354
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+++ Y +DI LDTFPY G T SLYMGVP VT+ G H+ G SLLT
Sbjct: 355 SG---TDNYLADYQEIDIMLDTFPYNGGGMTATSLYMGVPVVTLRGDHHSARFGASLLTA 411
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
G IA +YV++ALQLA+D L + +LR + SP+CD + + +
Sbjct: 412 AGYGEWIADTLGDYVKIALQLAADQAFLTATQKNLRWEVEHSPLCDSRRYGAEFWRVCID 471
Query: 543 MWHRYCKGD 551
+W R KGD
Sbjct: 472 LWGR--KGD 478
>gi|288963186|ref|YP_003453465.1| hypothetical protein AZL_f01610 [Azospirillum sp. B510]
gi|288915438|dbj|BAI76921.1| hypothetical protein AZL_f01610 [Azospirillum sp. B510]
Length = 669
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/555 (29%), Positives = 244/555 (43%), Gaps = 44/555 (7%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
G +Y++ L A + A + P+ + +LGV ++ + + KAIA
Sbjct: 110 GKFGTLYRNTGLLALARLNFVRAALLAPDDASIRISLGVALRELREVKGSTTTLGKAIAC 169
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DK 154
+P AEA+ R+ G ++ A+ +Y + ++ P + L + + D +
Sbjct: 170 DPAAAEAHLQHAHGLRELGRLADAMVSYGRARRLAPGRSDILNYHLYCKQNLCDWQDHEA 229
Query: 155 LFEAHRDW--------------------GKRFMRLYSQYTSWDNTKDPE----------- 183
L +A D G++ + + Y + P
Sbjct: 230 LCQAVLDTIDQDGGTVIPLAVLTIPTTPGQQRLAVEQFYRRLLEPQAPAPLPSRPAAAPR 289
Query: 184 --RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
RPL + Y+S D++ H+ +Y HD + YS + R E K
Sbjct: 290 GARPLRVAYLSADFYEHATAYLAAELFERHDRSRVVPLAYSYGPDDGSPMRRRLETAFAK 349
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+ DI +VA + E +DILV+L GHT N + ++ + APVQV ++GYP T+
Sbjct: 350 ---FYDIRAAGADEVARHMAEIGVDILVDLKGHTKNTRFDLITRRLAPVQVAYLGYPGTS 406
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY---TPSPEAGPVCPTPALTNGFI 358
GLP +DY + D++ PP+ + + E+L+ LP+ + P PE PV L
Sbjct: 407 GLPHMDYIVGDAIVTPPDHQPHYTEQLLLLPDSYQINGRDRPLPERTPVRAAYGLPENSF 466
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
F SFN L K++P + +W R+L VP S L + + R + L
Sbjct: 467 VFCSFNALQKLSPAIFALWMRLLARVPGSVLWLYGGAPDGERNLRREAAARGVAPDRLLF 526
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
LPL DH+ Y + D+ LDT PY G TTT ++L+MG P VT G A V S
Sbjct: 527 ASKLPLA----DHLARYRVADLCLDTLPYTGHTTTSDALWMGCPVVTCLGGTFASRVAAS 582
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
LLT GL LI +EY LA++LA D TALA LR L D SP+ D + F LE
Sbjct: 583 LLTAAGLPELITHTLEEYETLAVRLAEDATALAALRRHLEDNRLHSPLFDAKRFVHHLER 642
Query: 539 TYRNMWHRYCKGDVP 553
Y MW + G P
Sbjct: 643 AYDIMWQLHAGGHPP 657
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+FD A + +P A L I ++ + + Y+ L+I P + + NL
Sbjct: 19 RFDEADAACRIVLAHHPDHAGFLQFLATIRVRQNRTAEGLVLYRRILAISPEWIDAWYNL 78
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
V G+ +AA+ +++A A P A Y G LYR+ G ++LA + + + PD
Sbjct: 79 TVALEGDGRHEAASGSLKRAAAIAPDAAGLYGKFGTLYRNTGLLALARLNFVRAALLAPD 138
>gi|325187990|emb|CCA22532.1| predicted protein putative [Albugo laibachii Nc14]
Length = 968
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/600 (26%), Positives = 262/600 (43%), Gaps = 57/600 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + AI Y A PH A A +NLG + K++ L++A+ YQ A++I
Sbjct: 349 NLGNALKDKGMIKEAIHCYSTAARLMPHLAAAYSNLGSVLKEQGKLEQALAHYQQAITID 408
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G V+ ++D + + AI P + +AY+NL Y+D G + AI
Sbjct: 409 PRFADAFSNMGNVFKDMNRLDDSIQCYTTAIRLKPEFTDAYSNLASAYKDGGQLREAIAC 468
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYI-----NEGHDDKLFEAHRDWGKR------------ 165
Y + L + P+ +A N +M +I E KL ++
Sbjct: 469 YRKALFLRPNFPDAFANYFHSMVFICDWETREKDFRKLLGFLETQLRKENVLPSVQPFHA 528
Query: 166 ---------FMRLYSQYTSWDNT--------------KDPERPLVIGYVSPDYFTHSVSY 202
F+ + +Y S K P + IGYVS D H +++
Sbjct: 529 LVYPLSMHCFLEIAKRYASRAKMNVQLVDFKVHQSPLKLPNERIRIGYVSSDLGNHPLAH 588
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
+++ H ++ + YS + +R+K+ + + D+ + + A +
Sbjct: 589 LMQSVFGMHRRSHFDIFCYSTTPNDHSC---WRKKIASEAEHFIDLSQVSNGEAAERILR 645
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
D I ILV L G+T + + A PAPVQV+++G+ T G I Y + D + PPE +Q
Sbjct: 646 DGIHILVNLNGYTKGARNEIFALGPAPVQVSYMGFCGTLGAEYIQYMVGDKVVVPPENRQ 705
Query: 323 KHVEELIRLPECFLCYTPSPEAGPV-----CPTP---ALTNGFITFGSFNNLAKITPKVL 374
E++I +P + C A V CP + G F +FN + KI P
Sbjct: 706 FFTEKIISMPHSYFCNDHKQSAREVLDVSKCPKREQYGVPQGKFVFCNFNQVYKIDPDTF 765
Query: 375 QVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQ 433
W +L VPNS L +++ P ++R + + G+ R+ + +H++
Sbjct: 766 TTWMNVLKRVPNSILWLLRFPPVAEANIR----AQARERGVPDDRLQFTD-VAKKEEHLK 820
Query: 434 AYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNE 493
L D+ LDT TT C+ L+ G P +T+A A V SLL L +I +
Sbjct: 821 RGHLADLFLDTPECNAHTTGCDILWGGTPMITLAKDRMATRVASSLLRAANLDEMITNSL 880
Query: 494 DEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+EY +LA+ LA+D ++ L + P+ D Q + LE+ W RY G P
Sbjct: 881 EEYEELAVTLATDTKRWRAIKDKLERSRTSCPLFDTQRWVRNLETGLMMAWERYESGQPP 940
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL V+Y ++ ++ AI Y+ A +P +A +NLG +YK + + A C+ A+ +K
Sbjct: 145 NLAVSYMQIGQWQQAIETYKTALTLDPSLVDAHSNLGNLYKAQGMYEDAKSCFTDAIRVK 204
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL VY G++DAA ++AI P + +AY NLG R++G + +I+
Sbjct: 205 PTFAIAWSNLAGVYQHSGQLDAAIIHYQEAIRLAPDFVDAYTNLGNALRESGRLQDSINV 264
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y++ ++I PD A N LA Y + G D
Sbjct: 265 YKKAIRIRPDFATAHGN--LASAYYDSGQMD 293
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A EM + D +I+ Y A A NNLG KD+ + +A+ CY A +
Sbjct: 315 NLGNALREMGQLDQSILCYRTALRLKSDHPHAYNNLGNALKDKGMIKEAIHCYSTAARLM 374
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + + +NLG V QGK++ A ++AI +P +A+A++N+G +++D + +I
Sbjct: 375 PHLAAAYSNLGSVLKEQGKLEQALAHYQQAITIDPRFADAFSNMGNVFKDMNRLDDSIQC 434
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
Y +++ P+ +A N LA Y + G
Sbjct: 435 YTTAIRLKPEFTDAYSN--LASAYKDGGQ 461
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E AI FY A +P ++A NNL V Y +A+E Y+ AL++
Sbjct: 111 NLGNALKETGDIVGAIHFYVKAIQLHPRFSDAYNNLAVSYMQIGQWQQAIETYKTALTLD 170
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + +NLG +Y QG + A AI PT+A A++NL +Y+ +G + AI
Sbjct: 171 PSLVDAHSNLGNLYKAQGMYEDAKSCFTDAIRVKPTFAIAWSNLAGVYQHSGQLDAAIIH 230
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ +++ PD +A N
Sbjct: 231 YQEAIRLAPDFVDAYTN 247
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y + D AI+ Y+ A P +A NLG ++ L ++ Y+ A+ I+
Sbjct: 213 NLAGVYQHSGQLDAAIIHYQEAIRLAPDFVDAYTNLGNALRESGRLQDSINVYKKAIRIR 272
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + NL Y G+MD A +AI P + +AYNNLG R+ G + +I
Sbjct: 273 PDFATAHGNLASAYYDSGQMDLAILTFRQAILLEPNFPDAYNNLGNALREMGQLDQSILC 332
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ D +A N
Sbjct: 333 YRTALRLKSDHPHAYNN 349
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + D+AI+ + A P+ +A NNLG ++ LD+++ CY+ AL +K
Sbjct: 281 NLASAYYDSGQMDLAILTFRQAILLEPNFPDAYNNLGNALREMGQLDQSILCYRTALRLK 340
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ + NNLG +G + A A P A AY+NLG + ++ G + A+
Sbjct: 341 SDHPHAYNNLGNALKDKGMIKEAIHCYSTAARLMPHLAAAYSNLGSVLKEQGKLEQALAH 400
Query: 123 YEQCLKIDPDSRNAGQN 139
Y+Q + IDP +A N
Sbjct: 401 YQQAITIDPRFADAFSN 417
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG A+ + F +I + + +P AEA NLG K+ ++ A+ Y A+ + P
Sbjct: 78 LGAAHFQSGNFAESIYYNQQCIRLDPQFAEAYGNLGNALKETGDIVGAIHFYVKAIQLHP 137
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
FS + NNL V Y G+ A E + A+ +P+ +A++NLG LY+ G A +
Sbjct: 138 RFSDAYNNLAVSYMQIGQWQQAIETYKTALTLDPSLVDAHSNLGNLYKAQGMYEDAKSCF 197
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
+++ P A N LA Y + G D
Sbjct: 198 TDAIRVKPTFAIAWSN--LAGVYQHSGQLD 225
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + +I Y+ A P A A NL Y D +D A+ ++ A+ ++
Sbjct: 247 NLGNALRESGRLQDSINVYKKAIRIRPDFATAHGNLASAYYDSGQMDLAILTFRQAILLE 306
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NNLG G++D + A+ + AYNNLG +D G I AI
Sbjct: 307 PNFPDAYNNLGNALREMGQLDQSILCYRTALRLKSDHPHAYNNLGNALKDKGMIKEAIHC 366
Query: 123 YEQCLKIDP 131
Y ++ P
Sbjct: 367 YSTAARLMP 375
>gi|357059078|ref|ZP_09119923.1| hypothetical protein HMPREF9334_01640 [Selenomonas infelix ATCC
43532]
gi|355372986|gb|EHG20324.1| hypothetical protein HMPREF9334_01640 [Selenomonas infelix ATCC
43532]
Length = 906
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 194/361 (53%), Gaps = 13/361 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S D+ H + YF+ L D ++V VY+ + K D + + V + WR+
Sbjct: 545 IGYISGDFCEHVMLYFVWPFLAGFDSDQFEVYVYN-LGKHDQYSTFLQSLVTE----WRN 599
Query: 248 I--YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ + D +++A + D++DIL +L GHTA++ L A +PAPVQ++ +GY TTGLP
Sbjct: 600 LSDHARDMERIAREIHADEVDILFDLAGHTADSGLAAFAWKPAPVQISGLGYMATTGLPA 659
Query: 306 IDYRITDSLADPPETKQK--HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+DY +TD DP + + +VE+L+RL F CY TPA G+I F SF
Sbjct: 660 VDYFVTDRYCDPEGSGSESIYVEKLLRLTSQF-CYNGYTNLPVSTGTPARMKGYIQFASF 718
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N AK+ +L W I+ VPN+ L++K K + V L +LG + RV
Sbjct: 719 NQHAKLRDDMLLAWREIMERVPNAWLLLKNKAYGRRGVVAALQERLRRLGFDMNRV---M 775
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
+ D+MQ Y +DI+LDTFP+ G T+C++LYMGVP V+ H+ SLL +
Sbjct: 776 FEVATRDYMQRYLDVDIALDTFPWPGGGTSCDALYMGVPVVSYYTERHSTRFTYSLLANM 835
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L + ++Y+ A+ LA D+ L L LR M SPV D + + +E YR +
Sbjct: 836 GLADLASTKLEDYIATAVALAGDIDLLDALHRELRTRMKASPVMDQERYIREMEDCYRAI 895
Query: 544 W 544
W
Sbjct: 896 W 896
>gi|449449593|ref|XP_004142549.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Cucumis
sativus]
Length = 975
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 163/599 (27%), Positives = 265/599 (44%), Gaps = 59/599 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y E A +Y+ + NNL +IYK + N A+ CY L I
Sbjct: 372 NLGNIYMEWNMVPAAASYYKATLRVTTGLSAPFNNLAIIYKQQGNYADAISCYNEVLRID 431
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + L N G Y G++ A + +AI PT AEA+ NL Y+D+G + AI +
Sbjct: 432 PLAADGLVNRGNTYKEIGRVSEAIQDYIRAINIRPTMAEAHANLASAYKDSGLVEAAIKS 491
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLF------------------------- 156
Y+Q L + P+ A N L + + D DK+F
Sbjct: 492 YKQALHLRPEFPEATCNLLHTLQCVCNWEDRDKMFAEVEGIIKRQINMSVLPSVQPFHAI 551
Query: 157 ----------EAHRDWGKRFMRLYSQYTSWD-NTKDP---------ERPLVIGYVSPDYF 196
E R + +++ S+++ N P ER L IGYVS D+
Sbjct: 552 AYPIDPLLALEISRSYASHCLKIASRFSLPSFNHPSPVAIKRNGGFER-LRIGYVSSDFG 610
Query: 197 THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKV 256
H +S+ + + H+ ++ +V Y+ + +R+++ + + D+ + +
Sbjct: 611 NHPLSHLMGSVFGMHNREHVEVFCYAL---SPNDNTEWRQRIQFEAEHFVDVSSMTSDVI 667
Query: 257 AAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLAD 316
A M+ EDKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 668 AKMINEDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVS 727
Query: 317 PPETKQKHVEELIRLPECFLCYTPSPEAGPVC-PTPALTNGFITFGSFNNLAKITPKVLQ 375
P + E+++ LP C+ + +C L G F FN L K+ P++
Sbjct: 728 PLRYAHIYSEKIVHLPHCYFV---NDYKQVICLLVLHLPQGKFIFACFNQLYKMDPEIFN 784
Query: 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
W IL VPNS L + P +R R + + + E + + + + ++H++
Sbjct: 785 TWCNILKRVPNSALWLLRFP-AAGEMRLRAYAVAQGVQPEQI---IFTDVAMKNEHIRRS 840
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-KHLIAKNED 494
+L D+ LDT TT + L+ G+P +T+ A V SL GL +I +
Sbjct: 841 ALADLFLDTPLCNAHTTGTDILWAGLPMITLPLEKMATRVAGSLCLATGLGDEMIVSSMK 900
Query: 495 EYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
EY + A+ LA + L L L+ + P+ D + LE +Y MW+ +C G P
Sbjct: 901 EYEEKAVTLALNRPKLQALTNKLKAVRMTCPLFDTARWVRNLERSYFKMWNLHCSGQPP 959
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + DMAI+ Y+ A +P EA NNLG K+ +++A++CY L+++
Sbjct: 304 NLASTYYEQSQLDMAILHYKQAITCDPRFLEAYNNLGNALKEFGRVEEAIQCYNQCLALQ 363
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ Q+L NLG +Y + AAA + + + +NNL ++Y+ G+ + AI
Sbjct: 364 PSHPQALTNLGNIYMEWNMVPAAASYYKATLRVTTGLSAPFNNLAIIYKQQGNYADAISC 423
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + + NR
Sbjct: 424 YNEVLRIDPLAADGLVNR 441
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E + A+ +Y+ A P +A NLG +YK +A+ CYQ A+ ++
Sbjct: 236 NLAGLFMESGDLNRALQYYKEAVKLKPQFPDAYLNLGNVYKALGMPQEAIVCYQRAIQMR 295
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN++ + NL Y Q ++D A ++AI +P + EAYNNLG ++ G + AI
Sbjct: 296 PNYAIAYGNLASTYYEQSQLDMAILHYKQAITCDPRFLEAYNNLGNALKEFGRVEEAIQC 355
Query: 123 YEQCLKIDPDSRNAGQN 139
Y QCL + P A N
Sbjct: 356 YNQCLALQPSHPQALTN 372
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G Y ++ FDM I E A P AE N+ +K++ N+D A+ Y A+ ++P
Sbjct: 101 MGAIYYQLSDFDMCIAKNEEALRIEPRFAECYGNMANAWKEKGNIDLAIRYYLHAIELRP 160
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL Y +G++ AA+ +A+A NP +A++NLG L + G + A Y
Sbjct: 161 NFCDAWSNLASAYMRKGRLGEAAQCCRQALALNPLLVDAHSNLGNLMKAQGMVQEAYSCY 220
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
+ L+I P A N LA ++ G ++ + +++
Sbjct: 221 LEALRIQPTFAIAWSN--LAGLFMESGDLNRALQYYKE 256
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + A A NP +A +NLG + K + + +A CY AL I+
Sbjct: 168 NLASAYMRKGRLGEAAQCCRQALALNPLLVDAHSNLGNLMKAQGMVQEAYSCYLEALRIQ 227
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G ++ A + ++A+ P + +AY NLG +Y+ G AI
Sbjct: 228 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPQFPDAYLNLGNVYKALGMPQEAIVC 287
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y++ +++ P+ A N LA Y + D
Sbjct: 288 YQRAIQMRPNYAIAYGN--LASTYYEQSQLD 316
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A A +NL ++ + +L++A++ Y+ A+ +KP F + NLG VY G
Sbjct: 220 YLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPQFPDAYLNLGNVYKALG 279
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A ++AI P YA AY NL Y + + +AI Y+Q + DP A N
Sbjct: 280 MPQEAIVCYQRAIQMRPNYAIAYGNLASTYYEQSQLDMAILHYKQAITCDPRFLEAYNN 338
>gi|158425090|ref|YP_001526382.1| hypothetical protein AZC_3466 [Azorhizobium caulinodans ORS 571]
gi|158331979|dbj|BAF89464.1| TPR repeat protein [Azorhizobium caulinodans ORS 571]
Length = 779
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 248/542 (45%), Gaps = 49/542 (9%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+A+ ++A ++KP + NLG++ + + A E + +A+ +P + A NLG +
Sbjct: 244 EALALLKIAATLKPTVAALHANLGMILLEKRRHAEAMEALGEALKVDPNHVGALLNLGSV 303
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN-----------EGHDDKLFEA 158
D + A+ + LKI+PD+ A RL A N E KL
Sbjct: 304 CLDRKAYPEALAYLNRVLKIEPDNVVA---RLGAANASRQICQWRNVEQEEAAIAKLLAQ 360
Query: 159 HRDWGKRFMRLYSQYTSWDNTK-----------------------DPERPLVIGYVSPDY 195
F+ L S T D+ + DP R + IGY+S DY
Sbjct: 361 SATRTGPFLLLSSHMTPKDHLRAARVWAQGVRVERDDKLPPAPPADPSRRIRIGYLSNDY 420
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
+ H+ ++ HD + +++ YS D K+ R +V+ + +I + +
Sbjct: 421 YNHATTFLAVEMFERHDREKFEIFAYSH--SPDDKS-DMRRRVVSAFDHFVEIERMSNPE 477
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
A +R D IDILV+L G+T + +MA +PAPVQV ++GYP + G IDY + D
Sbjct: 478 AARRIRADGIDILVDLKGYTQGARSEIMALRPAPVQVNFLGYPGSMGADFIDYVVGDRFV 537
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL----TNGFITFGSFNNLAKITP 371
P + E++++LP C+ P+ A +GF+ F FNN KITP
Sbjct: 538 TPLSAAADYDEKIVQLPHCYQPNDRHRRISETLPSRAACGLPESGFV-FCCFNNTYKITP 596
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
V VW R+L VP+S L + + R + G+E R+ P LL DH
Sbjct: 597 AVFSVWMRLLDEVPDSVLWLY---EANAAARDNLAYEAAKFGIEPDRIIFAPNALLA-DH 652
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
+ ++ D+ LDT PY TT ++L+ GVP VT AG A V SLL VG+ LI
Sbjct: 653 LARHAHADLFLDTLPYNAHTTASDALWAGVPIVTCAGETFAARVAASLLDAVGMPELITT 712
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
+ +Y LAL LA D LA L+ L + + +P+ D + F +E+ Y+ M G
Sbjct: 713 SLADYEALALALARDPERLAGLKARLVEARATAPLFDSEKFTRDIEAAYQRMHALRSAGK 772
Query: 552 VP 553
VP
Sbjct: 773 VP 774
>gi|427406428|ref|ZP_18896633.1| hypothetical protein HMPREF9161_00993 [Selenomonas sp. F0473]
gi|425708247|gb|EKU71287.1| hypothetical protein HMPREF9161_00993 [Selenomonas sp. F0473]
Length = 348
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 181/344 (52%), Gaps = 10/344 (2%)
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
+ +F++ L D ++V VYS + D T R +WRD+ + AA
Sbjct: 1 MRHFVQPLLTGCDRTRFEVYVYSTTAELDDVTAALRPYAY----VWRDMGDTSPAETAAR 56
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE 319
+ D+ID+LV+L GH + L ++A +PAPVQ+ +GY T+GLP ++ +TD+ DPP
Sbjct: 57 IYADEIDVLVDLAGHASGGALPVLARRPAPVQMMGLGYTATSGLPAVNDFLTDAACDPPG 116
Query: 320 TKQKH--VEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
+ E+L+RLP F CY P TPA +I FG FN K T ++L VW
Sbjct: 117 AGHERYFTEKLVRLPSQF-CYVPPAGLPRSAGTPARRRSYILFGVFNQYRKFTDEMLAVW 175
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
IL VP RL++K + F +R L +L RV L P + +M Y
Sbjct: 176 REILARVPGGRLLLKSQVFFAPEMRSAAEERLRRLDFNLGRVLLEPA---DTGYMNRYLD 232
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
+D++LDTFP+ G TTC++ YMGVP VT + + G +LL+ GL L A+ ++Y+
Sbjct: 233 VDVALDTFPWPGGGTTCDAFYMGVPVVTRYAARRSTRFGYALLSHAGLAELAAETAEDYI 292
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
A+ LA+D+ L L LR +M +SPV D + + LE YR
Sbjct: 293 ARAVGLAADLDTLDALHGGLRSMMERSPVMDQEGYMRALEGAYR 336
>gi|402834306|ref|ZP_10882909.1| alpha/beta hydrolase family protein [Selenomonas sp. CM52]
gi|402278602|gb|EJU27661.1| alpha/beta hydrolase family protein [Selenomonas sp. CM52]
Length = 495
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 212/417 (50%), Gaps = 17/417 (4%)
Query: 132 DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF--MRLYSQYTSWDNTKDPERPLVIG 189
+ R A N L A++Y+ D +LF H + F +R Y+ D L IG
Sbjct: 87 EHRMAYSNCLFALHYLPGVEDARLFREHCGFAALFEGVRQYAH----DALLHCHERLRIG 142
Query: 190 YVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIY 249
Y+SPD+ ++FI LV+ + ++V Y D+ T E++ WRD+
Sbjct: 143 YISPDFAMQINAFFIMPLLVHRTKERFEVYCYDTRGAGDSVT----EQMRSLADAWRDVS 198
Query: 250 GIDEKKVAAMVREDKIDILVELTGHTANNK-LGMMACQPAPVQVTWIGYPNTTGLPTIDY 308
+ + AA + D+IDILV+L+GH A K L +A +PAPVQVT IG+ +TTGLP IDY
Sbjct: 199 SLPAAEQAACIYADEIDILVDLSGHAAGGKTLAALAHRPAPVQVTAIGWFDTTGLPAIDY 258
Query: 309 RITDSLADPPETKQKHVEELIRLPE-CFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLA 367
+ D L+ + ++ +E+ + L + LCY P P + + FGSFNN
Sbjct: 259 VLADRLSATADNEELFLEKTLCLHDHSMLCYMP-PSSVQYVTKRRERHEAPVFGSFNNFY 317
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
KIT + L +W I+ VP +RLV+K + R ++ G V+
Sbjct: 318 KITHEQLLLWREIVERVPGARLVLK-NTAASEVQERRMRRMAKRAGFAEGVVEFRRA--- 373
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH 487
+ D++ Y +DI+LDT+PY G TTC++LYMGVP VT G G+SLL+ GL
Sbjct: 374 SSDYLAQYLDIDIALDTYPYPGGGTTCDALYMGVPVVTRYGRRFGSRFGLSLLSAAGLSE 433
Query: 488 LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
L A +EY A+ LA D L L +LR M +SP+ DG +A +E+ Y W
Sbjct: 434 LAAATPEEYAAKAVSLARDTELLTALHETLRVRMEESPLMDGAGYAREVEALYEEAW 490
>gi|224144666|ref|XP_002325368.1| predicted protein [Populus trichocarpa]
gi|222862243|gb|EEE99749.1| predicted protein [Populus trichocarpa]
Length = 873
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 169/607 (27%), Positives = 260/607 (42%), Gaps = 61/607 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A Y+ + NNL VIYK + N A+ CY L
Sbjct: 258 LTNLGNIYMEWNMSAAAASCYKATLAVTTGLSAPFNNLAVIYKQQGNYSDAISCYNEVLR 317
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I+P + L N G Y G++ A + AI PT AEA+ NL Y+D+G + AI
Sbjct: 318 IEPMAADGLVNRGNTYKEIGRVSEAIQDYIHAINIRPTMAEAHANLASAYKDSGHVEAAI 377
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKRFMRL---------- 169
+Y Q L + PD A N L + + D DK+F+ +R + +
Sbjct: 378 KSYRQALLLRPDFPEATCNLLHTLQCVCCWEDRDKMFDEVEGIIRRQISMSVLPSVQPFH 437
Query: 170 -----------------YSQYTSWDNTKDPERP-----------------LVIGYVSPDY 195
Y+ + S ++ P L IGYVS D+
Sbjct: 438 AIAYPIDPVLALEISHKYAAHCSIIASRFALSPFKHPAPLPVKHERGSGRLRIGYVSSDF 497
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H +S+ + + H+ +N +V Y A+ D R R + + I D+ +
Sbjct: 498 GNHPLSHLMGSVFGMHNRENVEVFCY-ALSPNDGTEWRQRTQFEAEHFI--DVSAMSSDM 554
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ EDKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 555 IAKLINEDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFV 614
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNLA 367
P + E+L+ LP C+ + P C L G F FN L
Sbjct: 615 SPTRFSHIYSEKLVHLPHCYFVNDYKQKNLDVLDPTCQHKRLDYGLPEDKFIFACFNQLY 674
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P++ W IL VPNS L + P +R R + + + + + + + +
Sbjct: 675 KMDPEIFNTWCNILKRVPNSALWLLRFP-AAGEMRLRAYAVAQGVNPDQI---IFTDVAM 730
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-K 486
+H++ +L D+ LDT TT + L+ G+P VTM A V SL GL
Sbjct: 731 KQEHIRRSALADLFLDTPLCNAHTTGTDILWAGLPMVTMPLEKMATRVAGSLCLATGLGD 790
Query: 487 HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+I + EY + A+ LA + L +L L+ P+ D + + LE Y MW+
Sbjct: 791 EMIVSSMKEYEERAVSLALNKPKLQSLTNRLKAFRMTCPLFDTKRWVRNLERAYFKMWNI 850
Query: 547 YCKGDVP 553
+C G P
Sbjct: 851 HCSGQQP 857
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + ++AI+ Y+ A + EA NNLG KD +D+A++CY LSI+
Sbjct: 192 NLASTCYERGQVELAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEALQCYNQCLSIQ 251
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN Q+L NLG +Y AAA + +A + +NNL V+Y+ G+ S AI
Sbjct: 252 PNHPQALTNLGNIYMEWNMSAAAASCYKATLAVTTGLSAPFNNLAVIYKQQGNYSDAISC 311
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+I+P + + NR
Sbjct: 312 YNEVLRIEPMAADGLVNR 329
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E + A+ +Y+ A P +A NLG +YK +A+ CYQ A+ +
Sbjct: 124 NLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIMCYQRAVQTR 183
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN++ + NL +G+++ A ++AIA + + EAYNNLG +D G + A+
Sbjct: 184 PNYAMAFGNLASTCYERGQVELAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEALQC 243
Query: 123 YEQCLKIDPDSRNAGQN 139
Y QCL I P+ A N
Sbjct: 244 YNQCLSIQPNHPQALTN 260
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 16 MAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVV 75
M I E A P AE N+ +K++ ++D+A+ Y +++ ++PNF+ + +NL
Sbjct: 1 MCIAKNEEALRLQPRFAECYGNMANAWKEKGDIDRAIRYYLVSIELRPNFADAWSNLASA 60
Query: 76 YTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN 135
Y +G+++ A++ +A+A NP +A++NLG L + G + A Y + L+I P
Sbjct: 61 YMRKGRLNEASQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPSFAI 120
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRD 161
A N LA ++ G ++ + +++
Sbjct: 121 AWSN--LAGLFMESGDLNRALQYYKE 144
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 72/129 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D AI +Y ++ P+ A+A +NL Y + L++A +C + AL++
Sbjct: 22 NMANAWKEKGDIDRAIRYYLVSIELRPNFADAWSNLASAYMRKGRLNEASQCCRQALALN 81
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ P++A A++NL L+ ++G ++ A+
Sbjct: 82 PLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPSFAIAWSNLAGLFMESGDLNRALQY 141
Query: 123 YEQCLKIDP 131
Y++ +K+ P
Sbjct: 142 YKEAVKLKP 150
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A A NP +A +NLG + K + + +A CY AL I+
Sbjct: 56 NLASAYMRKGRLNEASQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQ 115
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NL ++ G ++ A + ++A+ P + +AY NLG +Y+ G AI
Sbjct: 116 PSFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIMC 175
Query: 123 YEQCLKIDPDSRNA-----------GQNRLLAMNYINE-GHDDKLFEAHRDWG 163
Y++ ++ P+ A GQ L ++Y D + EA+ + G
Sbjct: 176 YQRAVQTRPNYAMAFGNLASTCYERGQVELAILHYKQAIACDQRFLEAYNNLG 228
>gi|452963349|gb|EME68422.1| O-linked N-acetylglucosamine transferase [Magnetospirillum sp.
SO-1]
Length = 602
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 154/538 (28%), Positives = 239/538 (44%), Gaps = 45/538 (8%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
NLG + D+A+ECY+ A+ + ++ N+ + G + +A
Sbjct: 85 GNLGTVLISAGRPDQAMECYRRAVELDESYVDGWRNMASLAARTGDHEGSAL-------- 136
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG----- 150
AY+N+ L A +L E + D D+ + + A+ G
Sbjct: 137 ------AYSNVVRLTGGADGGALGYLGLELAVLCDWDNIPMVREAISALPSWRTGKSLPV 190
Query: 151 -------HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERP-LVIGYVSPDYFTHSVSY 202
HD E R + + ++ + RP L +GY+S D+ H+ +Y
Sbjct: 191 PPFTLLIHDFSPAEQRRHADEAASFIENRTAPMRHAPQARRPRLRLGYLSEDFHDHATAY 250
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
+ L HD +++ YS +A+ R ++ W ++ + + A +R
Sbjct: 251 LLAEALESHDRSRFEIFAYSYGPEAEGPV---RARLKGACDHWVELGRLSDADAAGRIRA 307
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
D IDILV+L GHT + G++A +PAP+QV W+G+P T G +DY I D PP +
Sbjct: 308 DGIDILVDLKGHTGMARTGILAARPAPLQVAWLGFPGTFGGSCMDYIIADRFVIPPGAEG 367
Query: 323 KHVEELIRLPECFLCYTPS----PEAGPVCPTP--ALTNGFITFGSFNNLAKITPKVLQV 376
+ E+++RLP LCY P+ P A P L FNN KI + V
Sbjct: 368 DYAEQVVRLP---LCYQPNDSRRPRAAAREPKAKWGLPGDAFVVAVFNNSFKINAEAFAV 424
Query: 377 WARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
W +L A P++ L V+ P S+R + + +G++ R+ P L +H+
Sbjct: 425 WISVLQAQPDAVLWFVEFHPAATASLR----AMAQAVGIDPARLVFAPR-LSQAEHLARL 479
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
S D+ LDT+P G TT ++L+ GVP V AG A V SLL +G LIA+++
Sbjct: 480 SAADLFLDTWPCGGHTTASDALWAGVPLVAWAGRTFASRVAGSLLHALGFDELIAESQGA 539
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
Y LA LA D ALA LR L SP+ DG+ F LE + MW + G P
Sbjct: 540 YYALAQHLAKDRDALAQLRARLWAAGQSSPLFDGKAFTPPLEQAFDTMWATWETGGKP 597
>gi|326498109|dbj|BAJ94917.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 986
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 162/607 (26%), Positives = 261/607 (42%), Gaps = 61/607 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A FY+ A + NNL VIYK + + A+ CY L
Sbjct: 371 LTNLGNIYMEWNMISTAASFYKAAIAVTSGLSSPLNNLAVIYKQQGSYADAIACYTEVLR 430
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + +L N G + G++ A + +A+ P AEA+ NL Y+D+G AI
Sbjct: 431 IDPTAADALVNRGNTFKEFGRVAEAIQDYIQAVTIRPNMAEAHANLASAYKDSGHQEAAI 490
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR--FMRLYSQYTSWD 177
+Y+Q L + PD N L + + + + D +F + +R M L +
Sbjct: 491 ASYKQALCLRPDFPEVTCNLLHTLQSVCDWENRDTMFREVEEIIRRQIKMSLLPSVQPFH 550
Query: 178 NTKDPERPLV------------------------------------------IGYVSPDY 195
P PL+ +GYVS D+
Sbjct: 551 AIAYPIDPLLALEISRKYAVQCSLIASRFGLPPFVHPPPLPVKAEGKHGRLRVGYVSSDF 610
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H +S+ + + HD N +V Y A+ + D +R+++ + + D+ +
Sbjct: 611 GNHPLSHLMGSVFGMHDRDNVEVFCY-ALSQNDG--TEWRQRIQAEAEHFIDVSAMTSDV 667
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A M+ EDKI +L+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 668 IAKMINEDKIQVLINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGASYIDYLVTDEFV 727
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNLA 367
P + E+L+ LP C+ + PVCP G F FN L
Sbjct: 728 SPTRYAHIYSEKLVHLPHCYFVNDYKQKNCDVLSPVCPHKRSDYGLPKDKFIFACFNQLY 787
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P++ W I+ VPNS L + P + R + G+ ++ + + +
Sbjct: 788 KMDPEIFDTWCNIVKRVPNSVLWLLRFP---ATGEMRVKAHAAARGVSPDQI-IFTDVAM 843
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-K 486
H+H++ L D+ LDT TT + L+ G+P +T+ A V SL GL
Sbjct: 844 KHEHIRRSELADLFLDTPLCNAHTTGTDILWAGLPMITLPLEKMATRVAGSLCLATGLGD 903
Query: 487 HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+I + EY A++LA++ L L L+++ P+ D + L+ Y MW+
Sbjct: 904 EMIVSSTKEYEDRAVELATNPAKLQALTNKLKEVRLTCPLFDTARWVRNLDRAYFKMWNI 963
Query: 547 YCKGDVP 553
YC G P
Sbjct: 964 YCSGRHP 970
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + DMAI Y A + EA NN+G KD +++A+ C+Q L ++
Sbjct: 305 NLATIYYEQRQLDMAIHCYNQAIICDSRFVEAYNNMGNALKDAGRVEEAINCFQSCLVLQ 364
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y + AA + AIA + NNL V+Y+ GS + AI
Sbjct: 365 ANHPQALTNLGNIYMEWNMISTAASFYKAAIAVTSGLSSPLNNLAVIYKQQGSYADAIAC 424
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + +A NR
Sbjct: 425 YTEVLRIDPTAADALVNR 442
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E+ + A+ +Y+ A P A+A N G +YK L +AV CYQ AL +
Sbjct: 237 NLAGLFMEVGDLNKAMQYYKEAVKLKPSFADAHLNQGNVYKAMGMLQEAVACYQRALQAR 296
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NL +Y Q ++D A +AI + + EAYNN+G +DAG + AI+
Sbjct: 297 PDYAMAYGNLATIYYEQRQLDMAIHCYNQAIICDSRFVEAYNNMGNALKDAGRVEEAINC 356
Query: 123 YEQCLKIDPDSRNAGQN 139
++ CL + + A N
Sbjct: 357 FQSCLVLQANHPQALTN 373
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 73/128 (57%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +D+ I E A +P AE N+ +K++ ++D A+ Y A+ ++P
Sbjct: 102 LGAIYFQLRDYDLCIAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRP 161
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL YT +G+++ AA+ ++A+ NP +A++NLG L + G + A Y
Sbjct: 162 NFCDAWSNLASAYTRKGRLNEAAQCCKQALVLNPRLVDAHSNLGNLMKAQGLVQEAYTCY 221
Query: 124 EQCLKIDP 131
+ ++IDP
Sbjct: 222 LEAIRIDP 229
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y A P+ +A +NL Y + L++A +C + AL +
Sbjct: 135 NMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKGRLNEAAQCCKQALVLN 194
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +AI +P +A A++NL L+ + G ++ A+
Sbjct: 195 PRLVDAHSNLGNLMKAQGLVQEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQY 254
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y++ +K+ P +A N+
Sbjct: 255 YKEAVKLKPSFADAHLNQ 272
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A Y A +PH A A +NL ++ + +L+KA++ Y+ A+ +KP+F+ + N G VY
Sbjct: 217 AYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLKPSFADAHLNQGNVY 276
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
G + A ++A+ A P YA AY NL +Y + + +AI Y Q + D
Sbjct: 277 KAMGMLQEAVACYQRALQARPDYAMAYGNLATIYYEQRQLDMAIHCYNQAIICD 330
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A + A NP +A +NLG + K + + +A CY A+ I
Sbjct: 169 NLASAYTRKGRLNEAAQCCKQALVLNPRLVDAHSNLGNLMKAQGLVQEAYTCYLEAIRID 228
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NL ++ G ++ A + ++A+ P++A+A+ N G +Y+ G + A+
Sbjct: 229 PHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLKPSFADAHLNQGNVYKAMGMLQEAVAC 288
Query: 123 YEQCLKIDPD 132
Y++ L+ PD
Sbjct: 289 YQRALQARPD 298
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K+ A+ + NP + LG IY + D + + AL+I P F++ N+
Sbjct: 77 KYSQALEHGNAVYEKNPRRTDNLLLLGAIYFQLRDYDLCIAKNEEALAIDPQFAECYGNM 136
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+ +G +D A AI P + +A++NL Y G ++ A +Q L ++P
Sbjct: 137 ANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKGRLNEAAQCCKQALVLNPR 196
Query: 133 SRNAGQN 139
+A N
Sbjct: 197 LVDAHSN 203
>gi|358636558|dbj|BAL23855.1| hypothetical protein AZKH_1534 [Azoarcus sp. KH32C]
Length = 716
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/487 (28%), Positives = 239/487 (49%), Gaps = 22/487 (4%)
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
A+ +P +++ LG V + AAAE++ + +A P + G ++ G +
Sbjct: 231 AIRHQPENIRAVAALGTVLNDLAEFGAAAEVLAQGLAHAPDDYRLHVAHGDALKELGDLD 290
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD--DKLFEAHRDWGKRFMRLYSQYTS 175
AI A E +++ P + N L + G D L A + + S +
Sbjct: 291 GAIAALETAIRLQPQRLDYHSN-LQQLRLCQPGWQPADALALA-----QEYAAAVSHHAP 344
Query: 176 WDNTKDP--------ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA 227
+ P R + IG +S + + F+ L + ++ V+S
Sbjct: 345 RPDGLPPLAAPTPRTGRRVRIGLLSAELAWTPIGRFLAGFLRHFPRDRIELWVFSDRHDT 404
Query: 228 -DAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
DA FR++V + W + G ++++A + + ++D+L++LTGH N+L M++
Sbjct: 405 PDALESEFRKRVHR----WVECSGWPDEQLARSILDARLDVLLDLTGHAGPNRLPMLSWH 460
Query: 287 PAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP 346
AP Q T++GY TTG P +D+RI D + +P + E ++RLP + C+ P+ E P
Sbjct: 461 LAPKQGTFLGYAGTTGAPGVDFRIADGITEPQGAEATSSERIVRLPGSYFCFDPACELPP 520
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFL 406
P PA NGF+TFG F KI+ + L+ W +L AVPN+R+ V+C+ F + R R
Sbjct: 521 EGPLPARRNGFVTFGCFVQRPKISVETLRSWIAVLDAVPNARMQVRCRSFTDTAARSRMA 580
Query: 407 STLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466
+ LG +++R DLLP + D ++ Y +DI L+TFP+ T C++L+MGVP + +
Sbjct: 581 EQIAALGGDAVRFDLLPWGSRD-DFLRNYQQIDIGLNTFPFHQATNLCDALWMGVPTLGL 639
Query: 467 AGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV 526
+G+ H + VS+ G+ N A +A ++ L LR +LR +S SP+
Sbjct: 640 SGTGHQSRMAVSICDAAGVGPWSYPNVGTLAAAAAAMAGNLDELETLRATLRKRISASPL 699
Query: 527 CDGQNFA 533
D + FA
Sbjct: 700 ADQRGFA 706
>gi|158334416|ref|YP_001515588.1| hypothetical protein AM1_1237 [Acaryochloris marina MBIC11017]
gi|158304657|gb|ABW26274.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 1865
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 166/598 (27%), Positives = 270/598 (45%), Gaps = 61/598 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A Y+ A N + AEA +NL I++ + ++A + AL +K
Sbjct: 1274 NLGTLLQNQGNIQEAEACYQQALQLNTNFAEAHSNLASIWQLNEQPERAKAGFYRALQLK 1333
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ + NL +Y Q +M A E +K + A P + EA+ +LG ++ G A+
Sbjct: 1334 PDYVPAHLNLANLYKEQRRMAVAIEHYQKVVVAEPQHTEAHFSLGQIFEYQGKSEEALAC 1393
Query: 123 YEQCLKIDPDSRN-------------------AGQNRLLAM------------------- 144
YE+ L+ +P++ + A RL M
Sbjct: 1394 YERALQGNPETHSLWFFISLVKIKLCNWQDYEAQVQRLQQMIAESFTAKYTPNPFVLSTF 1453
Query: 145 NYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFI 204
N+ E H ++ + +L S T K + L IGY+SPD H+V +
Sbjct: 1454 NFPLELHQAAARNQAQNAQRAVAQLRSSLTFAHPCKATPK-LRIGYLSPDLRDHAVGRLV 1512
Query: 205 EAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDK 264
+H+ Y++V Y+ V D T +++ + D+ + ++ A + +D
Sbjct: 1513 VDLFPHHNRDQYEIVAYTTVDVEDHIT----QQIQTGCDAFVDLSPLSTEQTAQRIYDDG 1568
Query: 265 IDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH 324
I ILV+L G+T N +++ QPAP+Q W+GYP+T G I Y + D PE Q +
Sbjct: 1569 IQILVDLAGYTIGNAASVLSLQPAPIQAQWLGYPDTMGAEFIQYALADQWLISPEIAQSY 1628
Query: 325 VEELIRLPECF----LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARI 380
E+++ LP F L + P P +GF+ F FN+ KITP + VW RI
Sbjct: 1629 TEKIVYLPHAFVGSPLAISDRPMTRAEFGVP--ESGFV-FCCFNSHYKITPDLFDVWMRI 1685
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L VP+S L + ++V + +Q G+ R+ P I + D++ Y L D+
Sbjct: 1686 LQQVPDSVLWLIEG---AETVMGNLRTEAKQRGVNPDRLVFAPKI-AHEDYLARYGLADL 1741
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LDTF Y +T + + G+P +T G +A +G S+ GL+ LI K+ +Y Q A
Sbjct: 1742 YLDTFVYNAGSTAVATCWSGLPMLTCPGPTNASRMGASICAAAGLESLICKSVADYEQRA 1801
Query: 501 LQLASDVTALANLRMSLRDLMSKSP-----VCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ LA+ LA +R L+ + +SP + + F LES ++ MW Y D P
Sbjct: 1802 IHLATHPAELAEIRNGLKRQL-QSPETYPALFQVEQFVASLESAFQQMWQGYLN-DAP 1857
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 164/361 (45%), Gaps = 37/361 (10%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYH-DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
+G ++ Y HS + F P H D Q +++++Y+ + R + + + +
Sbjct: 599 LGVLNQAYSPHSET-FSTLPFYEHLDRQQFEIILYAESSQDHPLEAYCRSRCDQFVLLPQ 657
Query: 247 DIYGIDEKKVAAMVREDKIDILVE----LTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
D+ + +R D +DIL+ G+ + +L M A VQV+ P T+G
Sbjct: 658 DL-----PESVQRIRNDDLDILLFGINIAVGNKSTARLAMYRL--ARVQVSANSSPVTSG 710
Query: 303 LPTIDYRITDSLADPPETKQ-KHVEELIRL--PECFLCYTPSPEAGPVCPTPA------- 352
+ IDY ++ L P ET Q ++ E+L+ P C CY P A PT A
Sbjct: 711 INNIDYYLSGELTTPAETFQSQYSEKLVTWAGPSC--CYRFPPSAQQ--PTAASYYRRDL 766
Query: 353 -LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCC-------DSVRHR 404
+ + + F S N K+ P++ W +IL AVPNS L++ PF + R+
Sbjct: 767 NIADDAVVFVSGANFFKLIPELRITWTQILAAVPNSVLLLY--PFSAWSHHYPVSAFRNH 824
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
+ G++ R+ + I Q + D+ LD +P+ G T+ + L +G+P V
Sbjct: 825 MAALFAGDGIDPSRLIIQDPIPNREQVKQLLQIADVYLDAYPFTGVTSLLDPLEVGLPVV 884
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
T AG G +LL + L LIA +E YV+LA+QL D T R ++ M+ +
Sbjct: 885 TQAGHSLRSRQGPALLESIDLTDLIATDEQGYVELAIQLGQDSTRRQQYRTLIQQKMAAN 944
Query: 525 P 525
P
Sbjct: 945 P 945
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 62/112 (55%)
Query: 25 FHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
H P+ A NNLG + +++ N+ +A CYQ AL + NF+++ +NL ++ + + +
Sbjct: 1262 IHLYPNHWGAYNNLGTLLQNQGNIQEAEACYQQALQLNTNFAEAHSNLASIWQLNEQPER 1321
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
A +A+ P Y A+ NL LY++ +++AI+ Y++ + +P A
Sbjct: 1322 AKAGFYRALQLKPDYVPAHLNLANLYKEQRRMAVAIEHYQKVVVAEPQHTEA 1373
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A K + L +A C + + + PN + NNLG + QG + A
Sbjct: 1232 PSTVQALFERSRQLKKENKLTEAEACLREVIHLYPNHWGAYNNLGTLLQNQGNIQEAEAC 1291
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
++A+ N +AEA++NL +++ A + + L++ PD
Sbjct: 1292 YQQALQLNTNFAEAHSNLASIWQLNEQPERAKAGFYRALQLKPD 1335
>gi|40063060|gb|AAR37916.1| TPR domain protein [uncultured marine bacterium 560]
Length = 764
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 173/596 (29%), Positives = 267/596 (44%), Gaps = 77/596 (12%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ E+ + D A+ YE A P+ AEA NNLG ++KD LD AV+ Y+ AL+I+
Sbjct: 180 NLGITLKELGQLDTAVKSYEKALAIKPNFAEAHNNLGNVFKDLGQLDTAVKSYEKALAIR 239
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++++ NNLG G++DAA EK +A P +AEA N G + + + A+ +
Sbjct: 240 PDYAEVHNNLGNALKELGQLDAAFNCYEKTLAIKPEFAEANYNRGNVLKGLKRLDEALAS 299
Query: 123 YEQC--LKID---------------------PDSRNAGQNRLLAMNYINEGH------DD 153
YE+ LK D P + +N++ + DD
Sbjct: 300 YERAYILKPDIDFLLGDLLHTKMHLCIWDDLPSQLDEFKNKINNSEKVIHPFPVLALIDD 359
Query: 154 KLFEAHRDWGKRFM-RLYSQYTSWDNTKD--PERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
E R + F YSQ + + + IGY S D+ H VS+
Sbjct: 360 P--EVQRKTAEIFANEKYSQSHLLSKIERYPKHKKIRIGYFSADFRDHPVSHLTAELYEI 417
Query: 211 HDYQNYKVVVYS-AVVKADAKTIRFREKVMKKGGI--WRDIYGIDEKKVAAMVREDKIDI 267
HD +++ +S D +R K G+ + D+ + K+V + R +IDI
Sbjct: 418 HDRNQFEIYAFSFGPDTQDEMNLRI------KAGVDHFHDVRSMSHKEVVMLARSLEIDI 471
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP---PETKQKH 324
V+LTG T N + + A AP+Q+++IGY T G DY + ADP PE QK+
Sbjct: 472 AVDLTGFTKNARTEIFAMSVAPIQISYIGYLGTMGANYYDYLV----ADPTIIPEKNQKY 527
Query: 325 VEELIRLPECFLCYTPSPEAGPVCPTP----------ALTNGFITFGSFNNLAKITPKVL 374
E I Y PS + +P L F FNN KITP
Sbjct: 528 FSEKI-------AYLPSYQVNDSTQSPPEIFFTRQDLGLPETGFVFCCFNNTFKITPTTF 580
Query: 375 QVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDH 431
W RIL V S L++ +S + + G++ R+ + LP+ ++
Sbjct: 581 DSWGRILEHVEGSILLIYVD---NESAKLNLTKEIVLRGIDPSRLIFGEKLPI----PEY 633
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
+ Y + D+ LDT PY TT+ ++L MG+P +T+ G+ + S++ V L LI
Sbjct: 634 LARYRVADLFLDTHPYNAGTTSSDALRMGLPVLTLKGNSFNSRMAASVINAVNLPELITS 693
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
+ EY LA++LA+ L ++ L + +P+ D F LES YR M+ RY
Sbjct: 694 TQKEYESLAIELATHPEQLKIIKEKLIKNLPTAPLYDTPLFTQHLESAYRTMYDRY 749
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 81/130 (62%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N GV E+ + + A+ YE A P AEA NNLG+ K+ LD AVE Y+ + IK
Sbjct: 112 NFGVTLQELGQLEAAVKHYEEALAIRPDYAEAHNNLGITLKELGQLDAAVESYKKTIVIK 171
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF+++ NNLG+ G++D A + EKA+A P +AEA+NNLG +++D G + A+ +
Sbjct: 172 PNFAEAHNNLGITLKELGQLDTAVKSYEKALAIKPNFAEAHNNLGNVFKDLGQLDTAVKS 231
Query: 123 YEQCLKIDPD 132
YE+ L I PD
Sbjct: 232 YEKALAIRPD 241
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 84/138 (60%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ E+ + D A+ Y+ P+ AEA NNLG+ K+ LD AV+ Y+ AL+IK
Sbjct: 146 NLGITLKELGQLDAAVESYKKTIVIKPNFAEAHNNLGITLKELGQLDTAVKSYEKALAIK 205
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF+++ NNLG V+ G++D A + EKA+A P YAE +NNLG ++ G + A +
Sbjct: 206 PNFAEAHNNLGNVFKDLGQLDTAVKSYEKALAIRPDYAEVHNNLGNALKELGQLDAAFNC 265
Query: 123 YEQCLKIDPDSRNAGQNR 140
YE+ L I P+ A NR
Sbjct: 266 YEKTLAIKPEFAEANYNR 283
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV E+ + + A+ YE A P AEA NN GV ++ L+ AV+ Y+ AL+I+
Sbjct: 78 NLGVTLQELGQLEAAVKHYEEALAIRPDYAEAHNNFGVTLQELGQLEAAVKHYEEALAIR 137
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ NNLG+ G++DAA E +K I P +AEA+NNLG+ ++ G + A+ +
Sbjct: 138 PDYAEAHNNLGITLKELGQLDAAVESYKKTIVIKPNFAEAHNNLGITLKELGQLDTAVKS 197
Query: 123 YEQCLKIDPDSRNAGQN 139
YE+ L I P+ A N
Sbjct: 198 YEKALAIKPNFAEAHNN 214
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
Query: 1 MYNL-GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL 59
+YN+ G+ Y + + D A+ +E A A+A NNLGV ++ L+ AV+ Y+ AL
Sbjct: 41 LYNISGICYKAIGQRDAAVKSFENALAIKQDFADAHNNLGVTLQELGQLEAAVKHYEEAL 100
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
+I+P+++++ NN GV G+++AA + E+A+A P YAEA+NNLG+ ++ G + A
Sbjct: 101 AIRPDYAEAHNNFGVTLQELGQLEAAVKHYEEALAIRPDYAEAHNNLGITLKELGQLDAA 160
Query: 120 IDAYEQCLKIDPDSRNAGQN 139
+++Y++ + I P+ A N
Sbjct: 161 VESYKKTIVIKPNFAEAHNN 180
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 23 LAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKM 82
++ + N EA +++G + KD PN N G+ Y G+
Sbjct: 13 ISLYSNGQIQEALDSVGALIKDY-----------------PNEPLLYNISGICYKAIGQR 55
Query: 83 DAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
DAA + E A+A +A+A+NNLGV ++ G + A+ YE+ L I PD A N
Sbjct: 56 DAAVKSFENALAIKQDFADAHNNLGVTLQELGQLEAAVKHYEEALAIRPDYAEAHNN 112
>gi|356535232|ref|XP_003536152.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Glycine max]
Length = 988
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 167/605 (27%), Positives = 265/605 (43%), Gaps = 61/605 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y E A +Y+ + + NNL +IYK + N A+ CY L I
Sbjct: 375 NLGNIYMEWNMVAAAAQYYKATLNVTTGLSAPYNNLAIIYKQQGNYVDAISCYNEVLRID 434
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + L N G Y G++ A + +AI PT AEA+ NL Y+D+G + A+ +
Sbjct: 435 PLAADGLVNRGNTYKEIGRVSDAIQDYIRAIVVRPTMAEAHANLASAYKDSGHVEAAVKS 494
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR---------------- 165
Y+Q L + PD A N L + + D DK+F+ +R
Sbjct: 495 YKQALILRPDFPEATCNLLHTLQCVCCWEDRDKMFKEVESIIRRQINMSVLPSVQPFHAI 554
Query: 166 -----------FMRLYSQYTSWDNTKDPERP-----------------LVIGYVSPDYFT 197
R Y+ + S ++ P L IGYVS D+
Sbjct: 555 AYPLDPMLALEISRKYAAHCSVIASRFALPPFNHPSPIPIKREGGYERLRIGYVSSDFGN 614
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
H +S+ + + H+ +N +V Y+ + A+ T +R+++ + + D+ + +A
Sbjct: 615 HPLSHLMGSVFGMHNRKNVEVFCYA--LSANDGT-EWRQRIQSEAEHFVDVSAMSSDAIA 671
Query: 258 AMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
M+ EDKI ILV L G+T + + A QPAP+QV+++G+P TTG IDY +TD P
Sbjct: 672 KMINEDKIHILVNLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSP 731
Query: 318 PETKQKHVEELIRLPECFLC--YTPSPE--AGPVCPTPALTNGF----ITFGSFNNLAKI 369
+ E+++ LP C+ Y + P CP G F FN L K+
Sbjct: 732 LGYANIYSEKIVHLPHCYFVNDYKQKNQDVLDPNCPHKRSDYGLPEDKFIFACFNQLYKM 791
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429
P++ W IL VPNS L + P +R R + + + + + + + +
Sbjct: 792 DPEIFNTWCNILKRVPNSALWLLRFP-AAGEMRLRAYAAAQGVQPDQI---IFTDVATKN 847
Query: 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-KHL 488
+H++ SL D+ LD+ TT + L+ G+P VT+ A V SL GL +
Sbjct: 848 EHIRRSSLADLFLDSPLCNAHTTGTDILWAGLPMVTLPLEKMATRVAGSLCLATGLGDEM 907
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
I + EY A+ LA + L L L+ + P+ D + LE +Y MW+ +C
Sbjct: 908 IVSSMKEYEDRAVSLALNRPKLKALTNKLKAVRLTCPLFDTARWVRNLERSYFKMWNLHC 967
Query: 549 KGDVP 553
G P
Sbjct: 968 SGQRP 972
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E F+ A+ +Y+ A P +A NLG +YK +A+ CYQ AL +
Sbjct: 239 NLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIACYQHALQTR 298
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN+ + NL +Y QG++D A ++A+A +P + EAYNNLG +D G + AI
Sbjct: 299 PNYGMAYGNLASIYYEQGQLDMAILHYKQAVACDPRFLEAYNNLGNALKDVGRVEEAIQC 358
Query: 123 YEQCLKIDPDSRNAGQN 139
Y QCL + P+ A N
Sbjct: 359 YNQCLTLQPNHPQALTN 375
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 76/138 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + DMAI+ Y+ A +P EA NNLG KD +++A++CY L+++
Sbjct: 307 NLASIYYEQGQLDMAILHYKQAVACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLTLQ 366
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN Q+L NLG +Y + AAA+ + + + YNNL ++Y+ G+ AI
Sbjct: 367 PNHPQALTNLGNIYMEWNMVAAAAQYYKATLNVTTGLSAPYNNLAIIYKQQGNYVDAISC 426
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + + NR
Sbjct: 427 YNEVLRIDPLAADGLVNR 444
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ FDM + E A PH AE N+ +K++ N+D A+ Y +A+ ++P
Sbjct: 104 LGAVYYQLHDFDMCVAKNEEALRIEPHFAECYGNMANAWKEKGNIDLAIRYYLIAIELRP 163
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF+ + +NL Y +G++ AA+ +A+A NP +A++NLG L + G + A Y
Sbjct: 164 NFADAWSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLMKAQGLVQEAYSCY 223
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
+ L+I P A N LA ++ G ++ + +++
Sbjct: 224 LEALRIQPTFAIAWSN--LAGLFMESGDFNRALQYYKE 259
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + A A NP +A +NLG + K + + +A CY AL I+
Sbjct: 171 NLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQ 230
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G + A + ++A+ P++ +AY NLG +Y+ G AI
Sbjct: 231 PTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIAC 290
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y+ L+ P+ A N LA Y +G D
Sbjct: 291 YQHALQTRPNYGMAYGN--LASIYYEQGQLD 319
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A A +NL ++ + + ++A++ Y+ A+ +KP+F + NLG VY G
Sbjct: 223 YLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALG 282
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A + A+ P Y AY NL +Y + G + +AI Y+Q + DP
Sbjct: 283 MPQEAIACYQHALQTRPNYGMAYGNLASIYYEQGQLDMAILHYKQAVACDP 333
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
N +A+E P + +L LG VY D E+A+ P +AE Y N+
Sbjct: 79 NYKQALEHSNTVYERNPLRTDNLLLLGAVYYQLHDFDMCVAKNEEALRIEPHFAECYGNM 138
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+++ G+I LAI Y +++ P+ +A N LA Y+ +G
Sbjct: 139 ANAWKEKGNIDLAIRYYLIAIELRPNFADAWSN--LASAYMRKG 180
>gi|372488421|ref|YP_005027986.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Dechlorosoma suillum PS]
gi|359354974|gb|AEV26145.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Dechlorosoma suillum PS]
Length = 625
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 166/601 (27%), Positives = 265/601 (44%), Gaps = 74/601 (12%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A+ + + NP+ A A ++GVI + +A+ + +++ P F+ L
Sbjct: 19 RLDEALALFNICLQNNPNDAAALYSVGVILLKQGKAAQAIPLLEHGVAVAPQFAPLWFVL 78
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G V G+ + A + +KA+ P Y E N G L R+ A++ + + L DP+
Sbjct: 79 GAVRQALGQKEEALQAYDKALEVRPDYTEVLINSGALLRELMRHQEALERFNRVLTYDPN 138
Query: 133 SRNAGQN-------------------RLLAMNYINEGHDDKLFEAHR----DW------- 162
+ A N RLLA+N N + L R DW
Sbjct: 139 HQLALGNCGILLTEFKRSTEAVGMFQRLLAIN-PNYDYGYGLLSYERLHACDWTDFAALR 197
Query: 163 ---------GKR------FM-------------RLYSQYTS------WDNTKDPERPLVI 188
G+R FM R +SQ+ W + + +
Sbjct: 198 EAIVAGVRAGRRACKSLAFMALSDSAEDHQRCARTFSQHHYPKAEPLWRGERYRHERIRV 257
Query: 189 GYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDI 248
YVSPD H V + I L HD ++ V S + + R R ++ K + D
Sbjct: 258 AYVSPDLREHPVGHLIAGVLERHDKSRFETVAISLGINDQS---RLRGRMEKAFDHFIDA 314
Query: 249 YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDY 308
+ +K+A ++RE +IDI V+L G TA+++ + A +PAPVQV ++GYP T GL +DY
Sbjct: 315 KQMGTRKIAELMREMEIDIAVDLAGFTADSRTDVFAYRPAPVQVNYLGYPGTLGLDYMDY 374
Query: 309 RITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA---LTNGFITFGSFNN 365
+ D PPE + + E+++ LP+ +L + P+ + L + F SF++
Sbjct: 375 ILADRFVIPPEHQCFYDEKVVYLPDAYLPTDSGVKISERTPSRSECGLPEQGVVFCSFSH 434
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI 425
K++P V +W +L VP S L + + + + + G++ R+ +
Sbjct: 435 DYKVSPPVFDIWMNLLRQVPGSVLWLVSR---NEVSQGNLRKEAQARGVDPSRLVFAGRV 491
Query: 426 LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL 485
L DH+ Y DI LDT PY TT ++L G+P VT G+ V SL+ VGL
Sbjct: 492 PLVEDHLARYRQADIFLDTHPYNAHTTAADALMAGLPVVTYMGNAFPARVAGSLVHAVGL 551
Query: 486 KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
L K+ EY LAL LA+D LA L+ L+ ++ P+ D F LE+ Y MW
Sbjct: 552 PELATKSLAEYEALALALATDPARLAALKARLQANLATQPLFDTDAFCRNLEAAYIAMWR 611
Query: 546 R 546
R
Sbjct: 612 R 612
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 17/147 (11%)
Query: 43 KDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA 102
+++ LD+A+ + + L PN + +L ++GV+ QGK A ++E +A P +A
Sbjct: 15 QNQGRLDEALALFNICLQNNPNDAAALYSVGVILLKQGKAAQAIPLLEHGVAVAPQFAPL 74
Query: 103 YNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW 162
+ LG + + G A+ AY++ L++ PD IN G + H++
Sbjct: 75 WFVLGAVRQALGQKEEALQAYDKALEVRPDYTEV---------LINSGALLRELMRHQEA 125
Query: 163 GKRFMRLYSQYTSWDNTKDPERPLVIG 189
+RF R+ T DP L +G
Sbjct: 126 LERFNRVL--------TYDPNHQLALG 144
>gi|83312909|ref|YP_423173.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
magneticum AMB-1]
gi|82947750|dbj|BAE52614.1| Predicted O-linked N-acetylglucosamine transferase
[Magnetospirillum magneticum AMB-1]
Length = 591
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/538 (28%), Positives = 240/538 (44%), Gaps = 45/538 (8%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
NL + ++A+ECY+ A+ + ++ N+ + G +
Sbjct: 74 GNLATVLMSDGRPNEAMECYRKAVQLDDSYVDGWRNMAALAAQTGDHE------------ 121
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG----- 150
T A AY+N+ L A +L E + D D+ + + A+ G
Sbjct: 122 --TSALAYSNVVRLTGGADGGALGYLGLELAVVCDWDNLPVVKEAIAALPSWRTGKSLPV 179
Query: 151 -------HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERP-LVIGYVSPDYFTHSVSY 202
HD E R + + ++ + P RP L +GY+S D+ H+ +Y
Sbjct: 180 APFTLLIHDFSPAELRRHADEAASFIENRVAPMAHQPAPRRPRLRLGYLSEDFHEHATAY 239
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
+ L HD +++ YS ++ R ++ + W ++ + E A +
Sbjct: 240 LLAEALESHDRSRFEIFAYS---YGPHESGAVRARLTEACDHWVELGPLAESDCAKRIAA 296
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
D IDILV+L GHT + ++A +PAP+QV W+G+P T G +DY I D PP +
Sbjct: 297 DGIDILVDLKGHTGRARTAILAARPAPIQVAWLGFPGTFGGTCMDYIIADPFVIPPGAEG 356
Query: 323 KHVEELIRLPECFLCYTPSPEAGPVCPT--PALTNGF----ITFGSFNNLAKITPKVLQV 376
+ E+++RLP LCY P+ P T P G + FNN KI + L V
Sbjct: 357 DYAEQVVRLP---LCYQPNDSRRPRALTREPKAKWGLPEESLVVAVFNNTFKINAETLAV 413
Query: 377 WARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
W +L A P++ L V+ P S+R + + +G++ R+ P L +HM
Sbjct: 414 WISVLQAQPDAVLWFVEFHPAATASLR----AMISAVGIDPARLIFAPR-LSQAEHMARL 468
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
S D+ LDT+P AG TT ++L+ GVP V G A V SLL +GL LI +++
Sbjct: 469 SAADLFLDTWPCAGHTTASDALWAGVPVVAWVGRTFASRVAGSLLHALGLDELITESQGA 528
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
Y LA LA D AL +R L SP+ DG+ F LE + MW ++ KG P
Sbjct: 529 YHALAQHLAKDRAALEQVRQRLWAATQTSPLFDGKAFVGPLEQAFDTMWAKWEKGGKP 586
>gi|392378369|ref|YP_004985529.1| tetratricopeptide TPR_2 repeat protein [Azospirillum brasilense
Sp245]
gi|356879851|emb|CCD00781.1| tetratricopeptide TPR_2 repeat protein [Azospirillum brasilense
Sp245]
Length = 706
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 216/419 (51%), Gaps = 11/419 (2%)
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
+ + A S +P+F+++ G + ++ AA + A P AEAY NL ++ +
Sbjct: 229 QAARRAESARPDFAEAALRRGDALQKRNRLAEAARAYARGTALCPDLAEAYANLALVRQT 288
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGK-RFMRLY 170
G + A Y + L + PD N L + G ++ EAHR W L
Sbjct: 289 QGDLDRAEAGYRRALALRPDLAEVRSN-LAYLELFRPGVTLARVLEAHRGWDAVHGAPLR 347
Query: 171 SQYT-SWDNTKDPERPLVIGYVSPDYFTHSVSYF-IEAPLVYHDYQNYKVVVYSAVVKAD 228
++T +D PL +G +S D+ H F + A D+ ++ +Y+ ++AD
Sbjct: 348 PEWTPRAPAIRDDSHPLRVGILSGDFRRHPAGQFAVRAVEALPDF-GVELTLYANQLEAD 406
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
T RFR + W + + ++A ++RED++D L++L GH A +LG+ A +PA
Sbjct: 407 DLTDRFRAAAAR----WVPVADRTDAELATLIREDRLDALIDLAGHNARGRLGVFARKPA 462
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
PVQV W GY TTGL +D + D+ P ++ + E ++R+P F+ Y P P+A
Sbjct: 463 PVQVAWSGYMATTGLAAMDALVADAHHVPEGAERFYSERILRMPGAFIAYDPPPDAPEPG 522
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
P P LT +TFG FN L K+T +VL WA +L VP SRL++K K C R+
Sbjct: 523 PPPCLTGQPVTFGVFNILTKLTDEVLATWAALLARVPESRLLLKTKALSCPETAARWRER 582
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
L G+ R+ +L + +HM + +D++LD FP+AG+TTT E+L+MGVP VT A
Sbjct: 583 LAAAGIAPERL-ILAGATPSREHMGWCARVDVALDPFPFAGSTTTLETLWMGVPVVTPA 640
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 25 FHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
P A+A NLG L++AV+ Y+ A +++P ++++ NLG T G++
Sbjct: 99 IRLRPAFAQAHYNLGNALDRLGRLEEAVDAYRQAAALRPGYARARFNLGNTLTALGRLGE 158
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A E A+A +P + EA+ N L G + A A + L + PD
Sbjct: 159 ADEAFRAALADDPGFGEAHANRASLMLQRGRAAEAQRALRRALALRPD 206
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV Y + A A + A+ +N+G + D +A + ++ A+
Sbjct: 41 LHLLGVVYLQAGHPAEAEPRIRAAIRADATVADYHDNVGSALRALDRDAEAADAHRAAIR 100
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P F+Q+ NLG G+++ A + +A A P YA A NLG G + A
Sbjct: 101 LRPAFAQAHYNLGNALDRLGRLEEAVDAYRQAAALRPGYARARFNLGNTLTALGRLGEAD 160
Query: 121 DAYEQCLKIDPDSRNAGQNR 140
+A+ L DP A NR
Sbjct: 161 EAFRAALADDPGFGEAHANR 180
>gi|398825494|ref|ZP_10583785.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. YR681]
gi|398223362|gb|EJN09707.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. YR681]
Length = 757
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 177/626 (28%), Positives = 279/626 (44%), Gaps = 89/626 (14%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A+ + AI Y+ A NP AEAC NLG + D A + Y A++I+
Sbjct: 139 NLGNAHHIQGQSAKAIPHYQKAIEINPGYAEACWNLGTALRATGQFDDAAKAYAGAIAIR 198
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ N+LG G+ + A KAIA P E + NLG AI +
Sbjct: 199 PDYAEAYNSLGNTLRALGRAEEAIAHYGKAIAIKPDDLEPHINLGDTLLGLNREDAAISS 258
Query: 123 YEQCLKIDPDSRNAGQNRLLAM-----------NY-----INEGHD---DKLFE---AHR 160
Y++ L I P+S + R A+ N+ I+ HD D L A
Sbjct: 259 YDRALAIKPESADILSRRGDALVRLRRDADAIANFERALAIDPAHDFAFDGLARTALASC 318
Query: 161 DWGK---------------RFMRLYSQYTSWDNTKD--------------PERP------ 185
DW + RF+ ++ + S+ N + PERP
Sbjct: 319 DWTRTVALRDEVAARVAAGRFVDAFA-FLSYSNDPEQQLVCARRYIRQHVPERPPPLWRG 377
Query: 186 -------LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
+ I YV+ + H +Y + HD ++V+ S + D IR R K
Sbjct: 378 GNWRNERIRIAYVACGFHDHPTAYLTAELIERHDRAGFEVIGIS-LGPDDQSDIRARLKT 436
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ D+ + ++ VAA++ E KIDI ++ +G+T N + + A +PAP+QV ++G+P
Sbjct: 437 AFDR--FYDVREMSDRDVAALIGELKIDIAIDRSGYTVNARPAIFAARPAPIQVNYVGFP 494
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFL---------CYTPS-PEAGPVC 348
+ G DY I D+ P E + E ++ LP+C+L + P+ EAG C
Sbjct: 495 GSLGADFYDYVIGDATVLPIEQQPFFSENIVHLPDCYLPNDSRRPDAAHMPTREEAGLPC 554
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
+GFI F FN+ KITP++ +W R+L V S L + S
Sbjct: 555 ------HGFI-FCCFNSSYKITPEIFDIWMRLLRQVSGSVLWLYADR---SSAEVNLRQA 604
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
G++ R+ + + DH+ + L D+ LDT PY TT ++L+ G+P VT G
Sbjct: 605 AAAHGIDPARL-VFARRMAQGDHLARHRLADLFLDTLPYNAHTTAADALWAGLPVVTCPG 663
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A V SLL +G+ L+ + Y +LAL+LA + L + R L+ P+ D
Sbjct: 664 KSFAGRVASSLLRGIGMPELVTSDLGSYERLALRLALEPALLDDTRKRLQQNRLSQPLFD 723
Query: 529 GQNFALGLESTYRNMWHRYCKGDVPS 554
+ LE+ Y MW R+ +GD P+
Sbjct: 724 SDRYRRNLEAAYVTMWERWQRGDKPA 749
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 64/130 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + A+ Y A P EA NNLG + + KA+ YQ A+ I
Sbjct: 105 NLGYALQLLGRSSEAMARYRKAIALRPDYHEAHNNLGNAHHIQGQSAKAIPHYQKAIEIN 164
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++++ NLG G+ D AA+ AIA P YAEAYN+LG R G AI
Sbjct: 165 PGYAEACWNLGTALRATGQFDDAAKAYAGAIAIRPDYAEAYNSLGNTLRALGRAEEAIAH 224
Query: 123 YEQCLKIDPD 132
Y + + I PD
Sbjct: 225 YGKAIAIKPD 234
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + + D AI YE P AEA NNLG + +A+ Y+ A++++P
Sbjct: 72 LGFTLTGLGQLDEAIRAYEKTIVLRPGLAEAHNNLGYALQLLGRSSEAMARYRKAIALRP 131
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
++ ++ NNLG + +QG+ A +KAI NP YAEA NLG R G A AY
Sbjct: 132 DYHEAHNNLGNAHHIQGQSAKAIPHYQKAIEINPGYAEACWNLGTALRATGQFDDAAKAY 191
Query: 124 EQCLKIDPD---SRNAGQNRLLAMNYINEG 150
+ I PD + N+ N L A+ E
Sbjct: 192 AGAIAIRPDYAEAYNSLGNTLRALGRAEEA 221
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ LG+ + + A + A + AEA LG LD+A+ Y+ +
Sbjct: 35 LLRLGMLRLDQRRLADAEPLFRRAVRADKRSAEAHQLLGFTLTGLGQLDEAIRAYEKTIV 94
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P +++ NNLG + G+ A KAIA P Y EA+NNLG + G + AI
Sbjct: 95 LRPGLAEAHNNLGYALQLLGRSSEAMARYRKAIALRPDYHEAHNNLGNAHHIQGQSAKAI 154
Query: 121 DAYEQCLKIDP 131
Y++ ++I+P
Sbjct: 155 PHYQKAIEINP 165
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+A YQ L+ S +L LG++ Q ++ A + +A+ A+ AEA+ LG
Sbjct: 16 EAERLYQAVLAADARHSGALLRLGMLRLDQRRLADAEPLFRRAVRADKRSAEAHQLLGFT 75
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
G + AI AYE+ + + P A N
Sbjct: 76 LTGLGQLDEAIRAYEKTIVLRPGLAEAHNN 105
>gi|302765547|ref|XP_002966194.1| peptide-N-acetylglucosaminyltransferase [Selaginella
moellendorffii]
gi|300165614|gb|EFJ32221.1| peptide-N-acetylglucosaminyltransferase [Selaginella
moellendorffii]
Length = 985
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 161/610 (26%), Positives = 271/610 (44%), Gaps = 65/610 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD--RDNLDKAVECYQMA 58
+ NLG Y E MA FY+ + + +NL IYK + + +A+ CY
Sbjct: 369 LTNLGNIYMEWNMISMAANFYKATLNVTTGLSAPYSNLATIYKQQAKGHYAEAIACYNEV 428
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
L I P + L N G G++ A + +A+A P AE + NL Y+D+G +
Sbjct: 429 LRIDPTAADGLVNRGNTLKEAGRVTEAIQDYLRAVAIRPNMAEGHANLASAYKDSGHVES 488
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINE--GHDDKLFEAHRDWGKRFM--------- 167
AI +Y+Q L++ D A N L + + + G D K E K+
Sbjct: 489 AIKSYKQALQLRIDFPEATCNLLHTLQCVCDWDGRDKKFEEVQEIIKKQIKMEVLPSVQP 548
Query: 168 -----------------RLYSQYTSWDNTKDPERPLV-----------------IGYVSP 193
R Y+++ S ++ +P V +GYVS
Sbjct: 549 FHAIAYPLDPLLALEISRKYAEHCSLVASRFSLQPFVHPPAVRVKDEGGSGRLRLGYVSS 608
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDE 253
D+ H +S+ + + H+ +N +V Y A+ ++D +R+++M + ++D+ +
Sbjct: 609 DFGNHPLSHLMGSVFKMHNRKNVEVFCY-ALSQSDGS--EWRQRIMNEAEHFKDMSAMSS 665
Query: 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS 313
+A + +D+I +LV L G+T K + A +PAP+QV+++G+P TTG IDY + D
Sbjct: 666 DMIARTIADDQIQVLVNLNGYTKGAKNEIFALKPAPIQVSYMGFPGTTGAQYIDYLVVDE 725
Query: 314 LADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL---------TNGFITFGSFN 364
L P E + E+L+ LP C+ + V + L + FI F FN
Sbjct: 726 LVCPNEFAHIYSEKLVHLPHCYFVNDYKQKNRDVLDSTNLPKRSDYGLPEDKFI-FACFN 784
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
L K+ P++ W IL VPNS L + P + R + + + +G + +
Sbjct: 785 QLYKMDPEIFTTWCNILKRVPNSALWLLRFPAAGED-RLKAFAVAQGVGPGQI---IFTD 840
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
+ ++H++ +L D+ LDT TT + L+ G+P +T+ A V +SL G
Sbjct: 841 VAAKNEHIRRSALADLFLDTPLCNAHTTGTDVLWAGLPMITLPLEKMATRVAMSLCYAAG 900
Query: 485 L-KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
++ K EY A+ LA + AL +L LR + P+ D + + + E Y M
Sbjct: 901 FGDEMVVKKMQEYEDRAVMLAENPKALESLTSRLRSVRLTCPLFDTERWVVNAERCYFKM 960
Query: 544 WHRYCKGDVP 553
W+ YC G P
Sbjct: 961 WNLYCDGKQP 970
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E ++ A+ +Y+ A P+ A+A NLG K+ +++ CY A+ ++
Sbjct: 235 NLAGLLMEAGDYERALAYYQEAIRLKPNFADAHLNLGNALKNLGKAQESIVCYLRAIQLR 294
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NL VY QG++D A KAI + ++ EAYNNLG +DAG + AI
Sbjct: 295 PDYAIAYGNLASVYYEQGQLDQAILHYHKAIMLDSSFIEAYNNLGNALKDAGRVDEAIAC 354
Query: 123 YEQCLKIDPDSRNAGQN 139
Y+ CL + + A N
Sbjct: 355 YQHCLTLQANHPQALTN 371
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ FDM I E A +P AE N+ +K++ N+D A++ Y +A+ ++P
Sbjct: 100 LGAIYYQLHDFDMCIAKNEEALRIDPQFAECYGNMANAFKEKGNVDLAIQYYLVAIELRP 159
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
F + +NL Y +G++ AA A+ NP +A++NLG L + G A Y
Sbjct: 160 GFCDAWSNLASAYMRKGRLQEAAACCRHALTLNPRLVDAHSNLGNLLKAQGLAPHAYYCY 219
Query: 124 EQCLKIDP 131
+ ++I P
Sbjct: 220 AEAIRIQP 227
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + D AI+ Y A + EA NNLG KD +D+A+ CYQ L+++
Sbjct: 303 NLASVYYEQGQLDQAILHYHKAIMLDSSFIEAYNNLGNALKDAGRVDEAIACYQHCLTLQ 362
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD--AGSISLAI 120
N Q+L NLG +Y + AA + + + Y+NL +Y+ G + AI
Sbjct: 363 ANHPQALTNLGNIYMEWNMISMAANFYKATLNVTTGLSAPYSNLATIYKQQAKGHYAEAI 422
Query: 121 DAYEQCLKIDPDSRNAGQNR 140
Y + L+IDP + + NR
Sbjct: 423 ACYNEVLRIDPTAADGLVNR 442
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y +A P +A +NL Y + L +A C + AL++
Sbjct: 133 NMANAFKEKGNVDLAIQYYLVAIELRPGFCDAWSNLASAYMRKGRLQEAAACCRHALTLN 192
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG A +AI PT+A A++NL L +AG A+
Sbjct: 193 PRLVDAHSNLGNLLKAQGLAPHAYYCYAEAIRIQPTFAIAWSNLAGLLMEAGDYERALAY 252
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ +++ P+ +A N
Sbjct: 253 YQEAIRLKPNFADAHLN 269
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + K +IV Y A P A A NL +Y ++ LD+A+ Y A+ +
Sbjct: 269 NLGNALKNLGKAQESIVCYLRAIQLRPDYAIAYGNLASVYYEQGQLDQAILHYHKAIMLD 328
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+F ++ NNLG G++D A + + + +A NLG +Y + IS+A +
Sbjct: 329 SSFIEAYNNLGNALKDAGRVDEAIACYQHCLTLQANHPQALTNLGNIYMEWNMISMAANF 388
Query: 123 YEQCLKI 129
Y+ L +
Sbjct: 389 YKATLNV 395
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + A A NP +A +NLG + K + A CY A+ I+
Sbjct: 167 NLASAYMRKGRLQEAAACCRHALTLNPRLVDAHSNLGNLLKAQGLAPHAYYCYAEAIRIQ 226
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL + G + A ++AI P +A+A+ NLG ++ G +I
Sbjct: 227 PTFAIAWSNLAGLLMEAGDYERALAYYQEAIRLKPNFADAHLNLGNALKNLGKAQESIVC 286
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
Y + +++ PD A N LA Y +G D+
Sbjct: 287 YLRAIQLRPDYAIAYGN--LASVYYEQGQLDQ 316
>gi|255562045|ref|XP_002522031.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223538835|gb|EEF40435.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 979
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 170/628 (27%), Positives = 267/628 (42%), Gaps = 71/628 (11%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A +Y+ + NNL VIYK + N A+ CY L
Sbjct: 364 LTNLGNIYMEWNMASTAASYYKATLAVTTGLSAPFNNLAVIYKQQGNYADAISCYNEVLR 423
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + L N G Y G++ A + +AI PT AEA+ NL Y+D+G + A+
Sbjct: 424 IDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITIRPTMAEAHANLASAYKDSGRVEAAV 483
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR-------------- 165
+Y Q L + PD A N L + + D DK+F +R
Sbjct: 484 KSYRQALVLRPDFPEATCNLLHTLQCVCCWEDRDKMFSEVEGIIRRQITMSVLPSVQPFH 543
Query: 166 -------------FMRLYSQYTSW------------------DNTKDPERPLVIGYVSPD 194
R Y+ + S + ER L IGYVS D
Sbjct: 544 AIAYPIDPMLALDISRKYAAHCSIIASRFGLPPFNHPPPIPIRRDRGSER-LRIGYVSSD 602
Query: 195 YFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEK 254
+ H +S+ + + H+ +N +V Y A+ D +R+++ + + ++ +
Sbjct: 603 FGNHPLSHLMGSVFGMHNRENVEVFCY-ALSPNDG--TEWRQRIQSEAEHFVEVSAMSAD 659
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
+A ++ EDKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 660 MIAKLINEDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEF 719
Query: 315 ADPPETKQKHVEELIRLPECFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNL 366
P + E+L+ +P C+ + P C G F FN L
Sbjct: 720 VSPTRYSHIYSEKLVHMPHCYFVNDYKQKNLDVLDPTCQHKRSDYGLPEDKFIFACFNQL 779
Query: 367 AKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLIL 426
K+ P++ W IL VPNS L + P +R R + + + E + + +
Sbjct: 780 YKMDPEIFNTWCNILKRVPNSALWLLRFP-AAGEMRLRSYAVSQGVQPEQI---IFTDVA 835
Query: 427 LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL- 485
+ +H++ +L D+ LDT TT + L+ G+P VT+ A V SL GL
Sbjct: 836 MKQEHIRRSALADLFLDTPLCNAHTTGTDILWAGLPMVTLPLEKMATRVAGSLCLATGLG 895
Query: 486 KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
+I + EY + A+ LA + L L L+ + P+ D + LE Y MW+
Sbjct: 896 DEMIVSSMKEYEEKAVSLALNRPKLQALTNKLKAVRMTCPLFDTPRWVQNLERAYFKMWN 955
Query: 546 RYCKGDVPSLKRMEMLQQQVVSEEPSKF 573
+C G P Q V+E+ S+F
Sbjct: 956 IHCSGQQP--------QHFKVTEDDSEF 975
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E + A+ +Y+ A P +A NLG +Y+ +A+ CYQ A+ +
Sbjct: 230 NLAGLFLESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRALGMPQEAIVCYQRAVQTR 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN++ + NL Y +G++D A ++AIA + + EAYNNLG +D G + AI
Sbjct: 290 PNYAVAFGNLASTYYERGQLDLAIHHYKQAIACDGRFLEAYNNLGNALKDVGRVEEAIQC 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y QCL + P A N
Sbjct: 350 YNQCLALQPSHPQALTN 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +DM I E A P AE N+ +K++ ++D A+ Y +A+ ++P
Sbjct: 95 LGAIYYQLHDYDMCIEKNEEALRLEPRFAECYGNMANAWKEKGDIDLAIRYYLIAIELRP 154
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF+ + +NL Y +G+++ AA+ +A+A NP +A++NLG L + G + A Y
Sbjct: 155 NFADAWSNLASAYMRKGRLNEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCY 214
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
+ L+I P A N LA ++ G ++ + +++
Sbjct: 215 LEALRIQPTFAIAWSN--LAGLFLESGDLNRALQYYKE 250
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + D+AI Y+ A + EA NNLG KD +++A++CY L+++
Sbjct: 298 NLASTYYERGQLDLAIHHYKQAIACDGRFLEAYNNLGNALKDVGRVEEAIQCYNQCLALQ 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ Q+L NLG +Y AA + +A + +NNL V+Y+ G+ + AI
Sbjct: 358 PSHPQALTNLGNIYMEWNMASTAASYYKATLAVTTGLSAPFNNLAVIYKQQGNYADAISC 417
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + + NR
Sbjct: 418 YNEVLRIDPLAADGLVNR 435
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 73/129 (56%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y +A P+ A+A +NL Y + L++A +C + AL++
Sbjct: 128 NMANAWKEKGDIDLAIRYYLIAIELRPNFADAWSNLASAYMRKGRLNEAAQCCRQALALN 187
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ PT+A A++NL L+ ++G ++ A+
Sbjct: 188 PLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFLESGDLNRALQY 247
Query: 123 YEQCLKIDP 131
Y++ +K+ P
Sbjct: 248 YKEAVKLKP 256
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A A NP +A +NLG + K + + +A CY AL I+
Sbjct: 162 NLASAYMRKGRLNEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQ 221
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G ++ A + ++A+ PT+ +AY NLG +YR G AI
Sbjct: 222 PTFAIAWSNLAGLFLESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRALGMPQEAIVC 281
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y++ ++ P+ A N LA Y G D
Sbjct: 282 YQRAVQTRPNYAVAFGN--LASTYYERGQLD 310
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A A +NL ++ + +L++A++ Y+ A+ +KP F + NLG VY G
Sbjct: 214 YLEALRIQPTFAIAWSNLAGLFLESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRALG 273
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
A ++A+ P YA A+ NL Y + G + LAI Y+Q + D
Sbjct: 274 MPQEAIVCYQRAVQTRPNYAVAFGNLASTYYERGQLDLAIHHYKQAIACD 323
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
N +A+E P + +L LG +Y D E E+A+ P +AE Y N+
Sbjct: 70 NYKQALEHSNTVYERSPLRTDNLLLLGAIYYQLHDYDMCIEKNEEALRLEPRFAECYGNM 129
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+++ G I LAI Y +++ P+ +A N LA Y+ +G
Sbjct: 130 ANAWKEKGDIDLAIRYYLIAIELRPNFADAWSN--LASAYMRKG 171
>gi|333912213|ref|YP_004485945.1| hypothetical protein DelCs14_0551 [Delftia sp. Cs1-4]
gi|333742413|gb|AEF87590.1| Tetratricopeptide TPR_1 repeat-containing protein [Delftia sp.
Cs1-4]
Length = 933
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 227/441 (51%), Gaps = 16/441 (3%)
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS-- 171
G + A+ Y+ L P+S A RLL + ++ ++ R++G+ RL+
Sbjct: 478 GDVRKALAQYDAMLVKHPNSAGAHSARLLTQLHFPGASAVQIGQSCREFGQLMRRLHGDP 537
Query: 172 QYTSWDNTKDPERPLVIGYVSPDYFTHSVS-YFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
Q+ N+KDP + L +G+VS D H+ + +F+ + + + Y D
Sbjct: 538 QHQH-GNSKDPGKVLRVGFVSADLRGHAAAKFFLPTMRELAKCREIECIAYCNNDLYDDV 596
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
T F E + WR + + + M++ED ID+L++L+GHT ++L ++A +PAPV
Sbjct: 597 TKEFMELFQQ----WRGVQDMSTDALVHMMQEDGIDVLIDLSGHTKGHRLDVLARRPAPV 652
Query: 291 QVTWIGYPNTTGLPTIDYRI-TDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCP 349
Q+TWIG P TGL T+DY + +D D P +++ E ++RLP ++ + PV
Sbjct: 653 QLTWIGNPGGTGLQTMDYIVLSDLFLDRPAVREQLTERILRLPLAYV-FDGGIHEEPVAS 711
Query: 350 TPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV-KCKPFCCDSVRHRFLST 408
PA NG++TFGSFN L K+ +V+QVW IL A+P +RLV+ C+P +
Sbjct: 712 LPAQRNGYLTFGSFNRLVKVNREVVQVWGAILQALPTARLVIGACEPSGPPA---HLRGW 768
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
L+ G+ RV + +++A+ +DI LDTFP+ G T +L+MGVP +T+ G
Sbjct: 769 LQDAGICEERVQFSSRMGFE-GYLRAHHDIDICLDTFPFTGGVVTNHALWMGVPTLTLVG 827
Query: 469 SVHAHNVGVSLLTKVGL-KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
+ +L +VGL + A + D +QLA ++++ LA +R SLR + V
Sbjct: 828 DLLCGRQSAEVLARVGLTEDFAAADLDGLLQLARYWSANLPRLALIRQSLRPALQALEVR 887
Query: 528 DGQNFALGLESTYRNMWHRYC 548
+ A + R W R+C
Sbjct: 888 QAEIAAKSVVMGLREAWRRWC 908
>gi|357131539|ref|XP_003567394.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 980
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 170/624 (27%), Positives = 266/624 (42%), Gaps = 67/624 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E D+A Y + NNL +IYK + D+A+ CY L
Sbjct: 365 LTNLGNVYMERNMMDVAASLYMATLTVTTGLSAPYNNLAIIYKQQGEYDRALTCYNEVLR 424
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + L N G G++ A + +AIA P AEA+ NL Y+D G + AI
Sbjct: 425 IDPTAADCLVNRGNTLKETGRVSEAIQDYFRAIAIRPAMAEAHANLASAYKDTGLLEAAI 484
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD--DKLFEAHR------------------ 160
+Y L+ D A N L + + D +K E
Sbjct: 485 VSYRHALQCRGDFPEATCNLLHTRQCVCDWDDREEKFIEVEGIIRRHIKNSLLPSVQPFH 544
Query: 161 ------------DWGKRFMRLYSQYTSW-------------DNTKDPERPLVIGYVSPDY 195
+ K++ YS S NT D L IGYVS D+
Sbjct: 545 AIAYPLDPTLALEISKKYAAHYSMVASRFGLPKFMHPSGVPVNTGDRTSRLRIGYVSSDF 604
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H +S+ + + HD +V Y A+ K D +R+++ + + D+ +
Sbjct: 605 GNHPLSHLMGSVFGMHDQDTIEVFCY-ALSKDDG--TEWRQRIQSEAEHFIDVSTMSSDM 661
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ EDKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 662 IAKVINEDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGASYIDYLVTDEFV 721
Query: 316 DPPETKQKHVEELIRLPECFLC--YTPSPEAG--PVCPTPALTNGF----ITFGSFNNLA 367
P + + E+L+ LP C+ Y + VCP G F FN L
Sbjct: 722 SPLKFSHIYSEKLVHLPHCYFVNDYKKKNQDALDQVCPHKRADYGLPEDKFIFACFNQLY 781
Query: 368 KITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVD--LLPL 424
K+ P + W I+ VPNS L +++ P +R +S + +R D +
Sbjct: 782 KMDPDIFGTWCNIVKRVPNSALWLLRFPPAGEMRLRAYAIS-------KGVRADQIIFTD 834
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
+ +H++ +L D+ LDT G TT + L+ G+P +T+ A V SL G
Sbjct: 835 VAAKSEHIRRSALADLFLDTPLCNGHTTGTDILWAGLPMITLPLEKMATRVAGSLCRATG 894
Query: 485 L-KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
+ + +I + EY + A+ LA + + L L L+ + P+ D + L+ Y M
Sbjct: 895 IGEEMIVSSLKEYEERAVFLAKNPSKLQALTNKLKAVRMTCPLFDTSRWVKNLDRAYLKM 954
Query: 544 WHRYCKGDVPSLKRMEMLQQQVVS 567
WH YC G P ++ Q+V+
Sbjct: 955 WHLYCLGRHPQHFKVLEDNTQIVN 978
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 71/137 (51%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L Y E + D+AI Y A + N EA NNLG KD D+A+ CY+ L+++P
Sbjct: 300 LANTYYEQGQLDLAIRSYRQAINCNSSYVEAYNNLGNALKDAGKSDEAIGCYEKCLALQP 359
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ Q+L NLG VY + MD AA + + + YNNL ++Y+ G A+ Y
Sbjct: 360 SHPQALTNLGNVYMERNMMDVAASLYMATLTVTTGLSAPYNNLAIIYKQQGEYDRALTCY 419
Query: 124 EQCLKIDPDSRNAGQNR 140
+ L+IDP + + NR
Sbjct: 420 NEVLRIDPTAADCLVNR 436
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 70/133 (52%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +FDM IV A P+ E NN+ ++++ ++D A++ Y A ++P
Sbjct: 96 LGAVYYQLREFDMCIVRNSEAVQIQPNFPECVNNMANAWREKGDIDCAIQLYDHATKLRP 155
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
F+ + NL YT +G + A +AIA NP +AY NLG + + G S A + Y
Sbjct: 156 TFADAWANLANAYTRKGNLSKAVGCYHQAIALNPRLVDAYCNLGDVLKAQGLYSDAYNCY 215
Query: 124 EQCLKIDPDSRNA 136
L ++P S NA
Sbjct: 216 VNALSVEPSSANA 228
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 63/123 (51%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+++Y+ A + P +A NLG +YK A+ CYQ A+ P+ + L Y
Sbjct: 245 AVLYYKEAIKYKPSFYDAHLNLGNLYKAVGMHQDAIVCYQNAVRASPDNDIAYGTLANTY 304
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
QG++D A +AI N +Y EAYNNLG +DAG AI YE+CL + P A
Sbjct: 305 YEQGQLDLAIRSYRQAINCNSSYVEAYNNLGNALKDAGKSDEAIGCYEKCLALQPSHPQA 364
Query: 137 GQN 139
N
Sbjct: 365 LTN 367
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + K D AI YE P +A NLG +Y +R+ +D A Y L++
Sbjct: 333 NLGNALKDAGKSDEAIGCYEKCLALQPSHPQALTNLGNVYMERNMMDVAASLYMATLTVT 392
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
S NNL ++Y QG+ D A + + +PT A+ N G ++ G +S AI
Sbjct: 393 TGLSAPYNNLAIIYKQQGEYDRALTCYNEVLRIDPTAADCLVNRGNTLKETGRVSEAIQD 452
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEG 150
Y + + I P A N LA Y + G
Sbjct: 453 YFRAIAIRPAMAEAHAN--LASAYKDTG 478
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D AI Y+ A P A+A NL Y + NL KAV CY A+++
Sbjct: 129 NMANAWREKGDIDCAIQLYDHATKLRPTFADAWANLANAYTRKGNLSKAVGCYHQAIALN 188
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + NLG V QG A A++ P+ A A+ + L+ G S A+
Sbjct: 189 PRLVDAYCNLGDVLKAQGLYSDAYNCYVNALSVEPSSANAWYYIAGLFMQWGDPSKAVLY 248
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ +K P +A N
Sbjct: 249 YKEAIKYKPSFYDAHLN 265
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY A+ Y A NP +A NLG + K + A CY ALS++
Sbjct: 163 NLANAYTRKGNLSKAVGCYHQAIALNPRLVDAYCNLGDVLKAQGLYSDAYNCYVNALSVE 222
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + + + ++ G A ++AI P++ +A+ NLG LY+ G AI
Sbjct: 223 PSSANAWYYIAGLFMQWGDPSKAVLYYKEAIKYKPSFYDAHLNLGNLYKAVGMHQDAIVC 282
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y+ ++ PD+ A LA Y +G D ++R
Sbjct: 283 YQNAVRASPDNDIAYGT--LANTYYEQGQLDLAIRSYR 318
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 25 FHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
+ NP E LG +Y D + A+ I+PNF + +NN+ + +G +D
Sbjct: 83 YMVNPRRLENLLLLGAVYYQLREFDMCIVRNSEAVQIQPNFPECVNNMANAWREKGDIDC 142
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A ++ + A PT+A+A+ NL Y G++S A+ Y Q + ++P
Sbjct: 143 AIQLYDHATKLRPTFADAWANLANAYTRKGNLSKAVGCYHQAIALNP 189
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P ++L LG VY + D +A+ P + E NN+ +R+ G I AI
Sbjct: 85 VNPRRLENLLLLGAVYYQLREFDMCIVRNSEAVQIQPNFPECVNNMANAWREKGDIDCAI 144
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
Y+ K+ P +A N LA Y +G+ K
Sbjct: 145 QLYDHATKLRPTFADAWAN--LANAYTRKGNLSK 176
>gi|297833104|ref|XP_002884434.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
lyrata]
gi|297330274|gb|EFH60693.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 168/607 (27%), Positives = 262/607 (43%), Gaps = 61/607 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M NLG Y E A ++ + NNL +IYK + N A+ CY L
Sbjct: 362 MANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISCYNEVLR 421
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + +L N G Y G++ A + AI PT AEA+ NL Y+D+G + AI
Sbjct: 422 IDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLASAYKDSGHVEAAI 481
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR--FMRLYSQYTSWD 177
+Y+Q L + PD A N L + + D K+F +R M + +
Sbjct: 482 TSYKQALLLRPDFPEATCNLLHTLQCVCCWEDRSKMFAEVESIIRRQINMSVLPSVQPFH 541
Query: 178 NTKDPERPLVIGYVSPDY---------------FTHSV-------------------SYF 203
P P++ +S Y FTH S F
Sbjct: 542 AIAYPIDPILALEISRKYAAHCSIIASRFGLPPFTHPAGLPVKREGGFKRLRIGYVSSDF 601
Query: 204 IEAPLVY--------HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
PL + H+ +N +V Y+ + A+ T +R+++ + + D+ +
Sbjct: 602 GNHPLSHLMGSVFGMHNRENVEVFCYA--LSANDNT-EWRQRIQSEAEHFLDVSSMSSDA 658
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ EDKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 659 IAKIINEDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFV 718
Query: 316 DPPETKQKHVEELIRLPECFLCY--------TPSPEAGPVCPTPALTNGFITFGSFNNLA 367
P + + E+L+ LP C+ P + P L F FN L
Sbjct: 719 SPLQYAHIYSEKLVHLPHCYFVNDYKQKNQDVLDPNSKPKRSDYGLPEDKFIFACFNQLY 778
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P+++ W IL VPNS L + P + RF + G++S ++ + + +
Sbjct: 779 KMDPEIVNTWCNILKRVPNSALWLLRFPAAGEM---RFRTYAAAQGVQSDQI-IFTDVAM 834
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH 487
+H++ L D+ LDT G TT + L+ GVP +T+ A V SL GL H
Sbjct: 835 KSEHIRRSVLADVILDTPLCNGHTTGTDVLWAGVPMITLPLEKMATRVAGSLCLATGLGH 894
Query: 488 -LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+I + +EY + A+ LA + L L LR P+ D + LE +Y MW+
Sbjct: 895 EMIVNSLEEYEEKAVSLALNKPKLQALTKELRASRLTCPLFDTMRWVKNLERSYFKMWNL 954
Query: 547 YCKGDVP 553
+C G P
Sbjct: 955 HCSGQQP 961
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ Y E + D+AI Y+ A +P EA NNLG KD +D+A+ CY L+++
Sbjct: 296 NIASIYYEQGQLDLAIRHYKQAISRDPRFLEAYNNLGNALKDIGRVDEAIRCYNQCLALQ 355
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN Q++ NLG +Y M A+ + + +A + +NNL ++Y+ G+ S AI
Sbjct: 356 PNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISC 415
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + +A NR
Sbjct: 416 YNEVLRIDPLAADALVNR 433
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E + A+ +Y+ A P +A NLG +YK +A+ CYQ AL ++
Sbjct: 228 NLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMR 287
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + + N+ +Y QG++D A ++AI+ +P + EAYNNLG +D G + AI
Sbjct: 288 PNCAMAFGNIASIYYEQGQLDLAIRHYKQAISRDPRFLEAYNNLGNALKDIGRVDEAIRC 347
Query: 123 YEQCLKIDPDSRNAGQN 139
Y QCL + P+ A N
Sbjct: 348 YNQCLALQPNHPQAMAN 364
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 84/158 (53%), Gaps = 2/158 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G Y ++ ++DM I E A P AE N+ +K++ + D+A+ Y +A+ ++P
Sbjct: 93 IGAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRP 152
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF+ + +NL Y +G+ A + ++A++ NP +A++NLG L + G I A Y
Sbjct: 153 NFADAWSNLASAYMRKGRFSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCY 212
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
+ ++I P A N LA ++ G ++ + +++
Sbjct: 213 LEAVRIQPTFAIAWSN--LAGLFMESGDLNRALQYYKE 248
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D AI +Y +A P+ A+A +NL Y + +A +C Q ALS+
Sbjct: 126 NMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRFSEATQCCQQALSLN 185
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ PT+A A++NL L+ ++G ++ A+
Sbjct: 186 PLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQY 245
Query: 123 YEQCLKIDP 131
Y++ +K+ P
Sbjct: 246 YKEAVKLKP 254
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY +F A + A NP +A +NLG + K + + +A CY A+ I+
Sbjct: 160 NLASAYMRKGRFSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQ 219
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G ++ A + ++A+ P + +AY NLG +Y+ G + AI
Sbjct: 220 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMC 279
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNT-KD 181
Y+ L++ P+ A N +A Y +G D ++ R R Y + N KD
Sbjct: 280 YQHALQMRPNCAMAFGN--IASIYYEQGQLDLAIRHYKQAISRDPRFLEAYNNLGNALKD 337
Query: 182 PER 184
R
Sbjct: 338 IGR 340
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
F A+ + + NP + +G IY D + + AL I+P F++ N+
Sbjct: 69 FKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMA 128
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP-- 131
+ +G D A AI P +A+A++NL Y G S A +Q L ++P
Sbjct: 129 NAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRFSEATQCCQQALSLNPLL 188
Query: 132 -DSRNAGQNRLLAMNYINEGH 151
D+ + N + A I+E +
Sbjct: 189 VDAHSNLGNLMKAQGLIHEAY 209
>gi|119357636|ref|YP_912280.1| hypothetical protein Cpha266_1840 [Chlorobium phaeobacteroides DSM
266]
gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 3560
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/586 (27%), Positives = 272/586 (46%), Gaps = 44/586 (7%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G Y ++ +++ A+ Y+ A C EA N+G + ++A+ Y+ A+++K
Sbjct: 190 NRGNVYLKLKRYEDALGSYKKAIALKLECDEAYYNMGNALLELQRYEEALASYEKAIALK 249
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
++ ++ +N GVV V + + A EKAIA P +AEAY N ++ + A+ +
Sbjct: 250 VDYFEAYSNRGVVLLVLRRYEDALVSYEKAIALKPHHAEAYANQCLVLHEMERYEDALVS 309
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE--GHDDKLFEAHRDWG----------------- 163
E+ L + PD L I + +DD++ + +
Sbjct: 310 CEKALSLKPDYDFLSGWYLYTRMRICDWTAYDDQIHQLEKKIACHEKATLPFPVLAIKES 369
Query: 164 ----KRFMRLYSQYT-SWDNTKDP------ERPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
+ R+Y+Q D T P + IGY S DY H+ +Y + HD
Sbjct: 370 LSLQQEASRIYAQEKFPADQTLSPIPKRSRRDTIRIGYFSADYHDHATAYLMAELFEQHD 429
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+ +V +S A+ + R++V + D+ ++++A + RE +IDI ++L
Sbjct: 430 RSKFDLVAFSFGPDANDE---MRKRVAASFERFLDVRSKTDREIAELSREMEIDIAIDLK 486
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G T N++ G+ A + APVQV+++GYP T G IDY I D + P +++Q + E+++ LP
Sbjct: 487 GFTRNSRPGIFALRAAPVQVSYLGYPGTMGAEYIDYLIADEVLIPEKSRQYYTEKIVCLP 546
Query: 333 ECFLCYTPSPEAGPVCPTPAL----TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
C+ T A +GF+ F FNN KITP W RIL VP S
Sbjct: 547 GCYQVNDTKRRIADRVFTRAECGLPESGFV-FCCFNNNYKITPATFDGWMRILGQVPGSV 605
Query: 389 L-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY 447
L + + P ++ R +T G + +PL +H+ + L D+ LDT P
Sbjct: 606 LWLFEDNPAVTGNL-GREAATRGIAGDRLVFAKRMPL----PEHLARHRLGDLFLDTLPC 660
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
TT ++L+ G+P +T G A V S+LT +GL LI ++EY LA++LA D
Sbjct: 661 NAHTTASDALWAGLPVLTCMGESFASRVAASVLTAIGLPELITTTQEEYEALAIELALDP 720
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ R L + + D Q F +E+ + M+ RY +G P
Sbjct: 721 EKMRATREKLARNRLTTRLFDTQLFTRNIEAAFEAMYERYQEGLPP 766
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 164/592 (27%), Positives = 260/592 (43%), Gaps = 54/592 (9%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y+ V M +++ A++ Y+ P CAEA +N G I ++A+ Y +++
Sbjct: 1616 YHRAVVLHNMKRYEEALLNYDHVLALKPDCAEAYSNRGNILTGLKRYEEALASYDQVIAL 1675
Query: 62 KP-NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
KP N + +N GVV G+ A E I N A+AY + G+ R AI
Sbjct: 1676 KPDNNLVAYSNRGVVLLELGRYRDAFLSFENTIEQNSDSADAYCHRGLALRKLKRYEEAI 1735
Query: 121 DAYEQCLKIDPDSRNAG------QNRLLAMNYINEG--HDDKLFEAHRDWG--------- 163
+YE+ L + PD + R+ N +E K E H
Sbjct: 1736 GSYEKALTLKPDYDFLSGLCLYTRMRICDWNAFDEQVRQIKKKIERHEKTSPPLVVLSIK 1795
Query: 164 ------KRFMRLYSQYTSWDNTKDPERP-------LVIGYVSPDYFTHSVSYFIEAPLVY 210
+ R+Y+ N P P + IGY S D+ H VS
Sbjct: 1796 DSLSLQQEAARIYAGEIFPANQTLPLIPKRSRRDTIRIGYFSADFCNHPVSILTAELFEM 1855
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
HD +++ +S + R E + D+ +K +A + R +IDI ++
Sbjct: 1856 HDRARFELYAFSCGSDTGDEMRRRLEVAFDH---FHDVRNHSDKDIALLARSLEIDIAID 1912
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
L G+T ++ G+ A + AP+QV++IGY T G IDY I D + P +++ + E+++
Sbjct: 1913 LGGYTTGSRTGIFALRAAPLQVSYIGYLGTMGAGYIDYLIADEVLIPEGSRKHYTEKIVY 1972
Query: 331 LPECFLCYTPSPEAGPV-----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
L + T A V C P +GF+ F FNN KITP W RIL VP
Sbjct: 1973 LSSYQVNDTKRRIAERVFTRAECGLP--ESGFV-FCCFNNTYKITPATFDGWMRILGQVP 2029
Query: 386 NSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDIS 441
S L + + +++R S G+++ R+ LP+ +++ Y + D+
Sbjct: 2030 GSVLWLYEENAKAAENLRREAASR----GVDAGRLIFGKRLPVA----EYLARYRVADLF 2081
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDT PY TT ++L+ G+P +T+ G A + SLLT +GL LI ++EY LA+
Sbjct: 2082 LDTLPYNAGTTASDALWAGLPVLTLRGESFASRMAASLLTAIGLPELITSGQEEYESLAI 2141
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+LA D L R L + + D F +E+ YR M+ RY +G P
Sbjct: 2142 ELALDSERLRATREKLARNRLTTSLFDTGRFTRNIEAAYRAMYERYQEGLPP 2193
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 266/590 (45%), Gaps = 53/590 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A E+ +++ A+ YE A P A+A +N G + +A+E Y+ A+++K
Sbjct: 2976 NRGIALQELKRYEEALASYERAIVLKPDYADAYSNRGNTLMKMNQYKEALESYERAIALK 3035
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + + G + + + EKAIA AE Y + GV+ + A+
Sbjct: 3036 PENADACFHQGNALQELKRYNESLASYEKAIALKSVNAEVYAHRGVVLQKLSRFEDAVLN 3095
Query: 123 YEQCLKIDPD----------------SRNAGQNRLLAMNYINEGHDDKLF----EAHRD- 161
Y+Q L + PD +++ + E H+ +F A +D
Sbjct: 3096 YKQALLLKPDYDFLPGLCLHAIMHLCDWREFDDQVHQLEKKIERHEKAIFPFPFSAVKDS 3155
Query: 162 --WGKRFMRLYSQYTSWDNT------KDPERPLV-IGYVSPDYFTHSVSYFIEAPLVYHD 212
+ R+Y+ N K P R + IGY S D+ H VS+ HD
Sbjct: 3156 LFLQQEAARVYAGEIFPANQTLPPIPKRPRRDTIRIGYFSADFCHHPVSFLTAELFEMHD 3215
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+++ +S + +R R +V + D+ +K +A + R +IDI ++L
Sbjct: 3216 RGRFELYAFS-FGQDTGDEMRRRLEVAFDH--FHDVRNHSDKDIALLARSLEIDIAIDLG 3272
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G T ++ G+ A + APVQV++IGY T G IDY I D + P +++ + E++ L
Sbjct: 3273 GFTMGSRTGIFALRAAPVQVSYIGYLGTMGAGYIDYLIADEVLIPEGSRKHYTEKIAYLS 3332
Query: 333 ECFLCYTPSPEAGPV-----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
+ T A V C P +GF+ F FNN KITP W RIL VP S
Sbjct: 3333 SYQVNDTKRRIADRVFTRAECGLP--ESGFV-FCCFNNTYKITPATFDGWMRILGQVPGS 3389
Query: 388 RL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDISLD 443
L + + +++R S G+++ R+ LP+ +++ Y + D+ LD
Sbjct: 3390 VLWLFEENAKAAENLRREAASR----GVDAGRLIFGKRLPVA----EYLARYRVADLFLD 3441
Query: 444 TFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
T PY TT ++L+ G+P +T+ G A + SLLT +GL LI ++EY LA++L
Sbjct: 3442 TLPYNAGTTASDALWAGLPVLTLRGESFASRMAASLLTAIGLPELITSGQEEYESLAIEL 3501
Query: 504 ASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A D + R L + + D F +E+ + M+ RY +G P
Sbjct: 3502 ALDPEMMRVTREKLARNRLTTRLFDTGRFTRNIEAAFEAMYERYQEGLPP 3551
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 159/601 (26%), Positives = 258/601 (42%), Gaps = 75/601 (12%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
LG+A E+ +++ A+ YE A P E +N G + +A+ Y+ AL+I
Sbjct: 2297 TLGIALHELGRYEEALASYEKAIVLYPGFVEVYSNRGNTFLILKRYQEALSSYEKALAIN 2356
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL------YRDA-GS 115
P ++++ N G + + A +K A P Y AY N V+ YR+A GS
Sbjct: 2357 PEYTRAYFNRGSALLELKRYEEALADYDKVTALKPDYIVAYINCAVVLQELKRYREAIGS 2416
Query: 116 ISLAI-----------------------DAYE----------QCLK--IDPDSRNAGQNR 140
A+ A+E +C K I P S A ++
Sbjct: 2417 YEKALALKPEYNFLRGLYLYTRMRICDWSAFEDQVNQIKRKIECQKKVIVPFSLLAVKDS 2476
Query: 141 LLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSV 200
L + ++F A++ + L + + D + IGY S D+ H V
Sbjct: 2477 LFLQQEAARIYAGEIFPANQT-----LPLIPKRSRRDTIR-------IGYYSADFCNHPV 2524
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
S+ HD +++ +S + R E + D+ +K +A +
Sbjct: 2525 SFLTAELFEMHDRGRFELYAFSCGSDTGDEMRRRLEVAFDH---FHDVRNHSDKDIALLA 2581
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
R +IDI ++L G+T ++ G+ A + AP+QV++IGY T G IDY I D + P +
Sbjct: 2582 RSLEIDIAIDLGGYTTGSRTGIFALRAAPLQVSYIGYLGTMGAGYIDYLIADEVLIPEGS 2641
Query: 321 KQKHVEELIRLPECFLCYTPSPEAGPV-----CPTPALTNGFITFGSFNNLAKITPKVLQ 375
++ + E+++ L + T A V C P +GF+ F FNN KITP
Sbjct: 2642 RKHYTEKIVYLSSYQVNDTKRRIAERVFTRAECGLP--ESGFV-FCCFNNNYKITPATFD 2698
Query: 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHM 432
W RIL V S L + ++ E G++ R+ LPL +H+
Sbjct: 2699 GWMRILGQVEGSVLFLYTDN---EAAASNLKKEAESRGVKRDRLIFGKRLPLA----EHL 2751
Query: 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKN 492
Y + D+ LDT PY TT ++L+ G+P +T+ G A + SLLT +GL LI
Sbjct: 2752 ARYRVADLFLDTNPYNAGTTASDALWAGLPVLTLRGESFASRMAASLLTAIGLPELITSG 2811
Query: 493 EDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDV 552
++EY LA++LA D + R L + + D F +E+ + M+ RY +G
Sbjct: 2812 QEEYESLAIELALDPEKMRATREKLARNRLTTRLFDTGRFTRNIEAAFEAMYERYQEGLP 2871
Query: 553 P 553
P
Sbjct: 2872 P 2872
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 187/385 (48%), Gaps = 27/385 (7%)
Query: 182 PERP----LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
P+RP + IGY S D+ H VS+ HD +++ +S + +R R +
Sbjct: 1075 PKRPRRDTIRIGYYSADFCNHPVSFLTAELFEMHDRGRFELYAFS-FGQDTGDEMRRRLE 1133
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
V + D+ +K +A + R +IDI ++L G+T ++ G+ A + APVQV++IGY
Sbjct: 1134 VAFDH--FHDVRNHSDKDIALLARSLEIDIAIDLGGYTTGSRTGIFALRAAPVQVSYIGY 1191
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPV-----CPTPA 352
T G IDY I D + P +++ + E++ L + T A V C P
Sbjct: 1192 LGTMGAGYIDYLIADEVLIPEGSRKHYTEKIAYLSSYQVNDTKRRIADRVFTRAECGLP- 1250
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQ 411
+GF+ F FNN KITP W RIL VP S L + + +++R S
Sbjct: 1251 -ESGFV-FCCFNNTYKITPATFDGWMRILGQVPGSVLWLFEENAKAAENLRREAASR--- 1305
Query: 412 LGLESLRV---DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
G+++ R+ LP+ +++ Y + D+ LDT PY TT ++L+ G+P +T+ G
Sbjct: 1306 -GVDAGRLIFGKRLPVA----EYLARYRVADLFLDTLPYNAGTTASDALWAGLPVLTLRG 1360
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A + SLLT +GL LI ++EY A++LA D + R L + + D
Sbjct: 1361 ESFASRMAASLLTAIGLPELITSGQEEYEARAIELALDPEKMRATREKLTRNRLTTRLFD 1420
Query: 529 GQNFALGLESTYRNMWHRYCKGDVP 553
+ F +E+ + M+ RY +G P
Sbjct: 1421 TRLFTRNIEAAFEAMYERYQEGLPP 1445
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+F+ A+ ++ H NP + NN G K ++A+E Y+ A++IKP+++ + +N
Sbjct: 64 EFEKAVTLFDQVIHINPVHPGSLNNRGNALKALQRYEEALESYEKAIAIKPDYADAYSNR 123
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
VV + + A EKAIA NP +AEAY N V++ D+ A+ +Y++ + + PD
Sbjct: 124 SVVLKELMRYEEALASYEKAIAINPDFAEAYYNRAVIFYDSDRYEEALASYDRAIVLKPD 183
Query: 133 SRNAGQNR 140
A NR
Sbjct: 184 YVEAYANR 191
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N V E+++++ A+ YE A NP AEA N VI+ D D ++A+ Y A+ +K
Sbjct: 122 NRSVVLKELMRYEEALASYEKAIAINPDFAEAYYNRAVIFYDSDRYEEALASYDRAIVLK 181
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ ++ N G VY + + A +KAIA EAY N+G + A+ +
Sbjct: 182 PDYVEAYANRGNVYLKLKRYEDALGSYKKAIALKLECDEAYYNMGNALLELQRYEEALAS 241
Query: 123 YEQCLKIDPDSRNAGQNR 140
YE+ + + D A NR
Sbjct: 242 YEKAIALKVDYFEAYSNR 259
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A +F F P E I R +KAV + AL+IKP+ ++SLNN
Sbjct: 812 RLDEAELFCTEILRFKPGYFEVLQLSATIALQRKASEKAVALFDQALAIKPDHARSLNNR 871
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G+ + A EKAIA NP YA AY+N G ++ A+++Y++ + ++P
Sbjct: 872 GIALQELKCYEEALGSYEKAIAINPEYAMAYSNRGNTLQELKRYEDAVESYDRAIALNPY 931
Query: 133 SRNAGQNRLLAM 144
S A NR +A+
Sbjct: 932 SATAYSNRGVAL 943
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A E+ ++ A+ YE A NP A A +N G ++ + AVE Y A+++
Sbjct: 870 NRGIALQELKCYEEALGSYEKAIAINPEYAMAYSNRGNTLQELKRYEDAVESYDRAIALN 929
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + +N GV + + A E ++AI P YA+AY N V+ AI +
Sbjct: 930 PYSATAYSNRGVALLKLVRYEDALESHDRAIVLKPDYADAYYNRSVVLEILMRYEEAIAS 989
Query: 123 YEQCLKIDPD 132
YE+ L + PD
Sbjct: 990 YEKALLLKPD 999
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A Y +P +A I R +KAV + + I P SLNN
Sbjct: 30 RLDEAEALYREILSSSPEHFDALQLSATIAAQRHEFEKAVTLFDQVIHINPVHPGSLNNR 89
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + + A E EKAIA P YA+AY+N V+ ++ A+ +YE+ + I+PD
Sbjct: 90 GNALKALQRYEEALESYEKAIAIKPDYADAYSNRSVVLKELMRYEEALASYEKAIAINPD 149
Query: 133 SRNAGQNR 140
A NR
Sbjct: 150 FAEAYYNR 157
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A Y F+P +A I R + +KA+ + AL+IKP+ ++SLNN
Sbjct: 1491 RLDEAEALYREILSFSPEHFDALQLSATIAAQRHDSEKALVLFDQALAIKPDHARSLNNR 1550
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G+ + D A E E+AIA P + E Y+N G ++ A+ Y+ + + P+
Sbjct: 1551 GIALQELKRYDEALESYERAIAVKPDFIEPYSNRGNTLQELKRYEEALACYDSAIALKPE 1610
Query: 133 SRNAGQNRLLAMN 145
+ +R + ++
Sbjct: 1611 NEQFYYHRAVVLH 1623
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 66/127 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G A + +++ A+ YE A P A+A +N V+ K+ ++A+ Y+ A++I
Sbjct: 88 NRGNALKALQRYEEALESYEKAIAIKPDYADAYSNRSVVLKELMRYEEALASYEKAIAIN 147
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+++ N V++ + + A ++AI P Y EAY N G +Y A+ +
Sbjct: 148 PDFAEAYYNRAVIFYDSDRYEEALASYDRAIVLKPDYVEAYANRGNVYLKLKRYEDALGS 207
Query: 123 YEQCLKI 129
Y++ + +
Sbjct: 208 YKKAIAL 214
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A Y +P +A I R + +KA+ + AL+IKP+ ++SLNN
Sbjct: 2918 RLDEAEALYREILSSSPEHFDALRLSATIAAQRHDSEKALALFDQALAIKPDHARSLNNR 2977
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G+ + + A E+AI P YA+AY+N G A+++YE+ + + P+
Sbjct: 2978 GIALQELKRYEEALASYERAIVLKPDYADAYSNRGNTLMKMNQYKEALESYERAIALKPE 3037
Query: 133 SRNA 136
+ +A
Sbjct: 3038 NADA 3041
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 68/133 (51%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
+ A+ ++ A P A + NN G+ ++ ++A+ Y+ A++I P ++ + +N G
Sbjct: 848 EKAVALFDQALAIKPDHARSLNNRGIALQELKCYEEALGSYEKAIAINPEYAMAYSNRGN 907
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
+ + A E ++AIA NP A AY+N GV A++++++ + + PD
Sbjct: 908 TLQELKRYEDAVESYDRAIALNPYSATAYSNRGVALLKLVRYEDALESHDRAIVLKPDYA 967
Query: 135 NAGQNRLLAMNYI 147
+A NR + + +
Sbjct: 968 DAYYNRSVVLEIL 980
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A E+ ++D A+ YE A P E +N G ++ ++A+ CY A+++K
Sbjct: 1549 NRGIALQELKRYDEALESYERAIAVKPDFIEPYSNRGNTLQELKRYEEALACYDSAIALK 1608
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P Q + VV + + A + +A P AEAY+N G + A+ +
Sbjct: 1609 PENEQFYYHRAVVLHNMKRYEEALLNYDHVLALKPDCAEAYSNRGNILTGLKRYEEALAS 1668
Query: 123 YEQCLKIDPDS 133
Y+Q + + PD+
Sbjct: 1669 YDQVIALKPDN 1679
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
+ A+V ++ A P A + NN G+ ++ D+A+E Y+ A+++KP+F + +N G
Sbjct: 1527 EKALVLFDQALAIKPDHARSLNNRGIALQELKRYDEALESYERAIAVKPDFIEPYSNRGN 1586
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
+ + A + AIA P + Y + V+ + A+ Y+ L + PD
Sbjct: 1587 TLQELKRYEEALACYDSAIALKPENEQFYYHRAVVLHNMKRYEEALLNYDHVLALKPDCA 1646
Query: 135 NAGQNR 140
A NR
Sbjct: 1647 EAYSNR 1652
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A V Y+ P EA L + R AV ++ AL I P+ S L
Sbjct: 2239 RLDEAEVIYQEILSIQPLHIEALQFLASMATRRKKYTDAVSLFERALEIDPDHPVSWCTL 2298
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G+ G+ + A EKAI P + E Y+N G + A+ +YE+ L I+P+
Sbjct: 2299 GIALHELGRYEEALASYEKAIVLYPGFVEVYSNRGNTFLILKRYQEALSSYEKALAINPE 2358
Query: 133 SRNAGQNR 140
A NR
Sbjct: 2359 YTRAYFNR 2366
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K+ A+ +E A +P + LG+ + ++A+ Y+ A+ + P F + +N
Sbjct: 2273 KYTDAVSLFERALEIDPDHPVSWCTLGIALHELGRYEEALASYEKAIVLYPGFVEVYSNR 2332
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + + + A EKA+A NP Y AY N G + A+ Y++ + PD
Sbjct: 2333 GNTFLILKRYQEALSSYEKALAINPEYTRAYFNRGSALLELKRYEEALADYDKVTALKPD 2392
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 58/115 (50%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
+ A+ ++ A P A + NN G+ ++ ++A+ Y+ A+ +KP+++ + +N G
Sbjct: 2954 EKALALFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIVLKPDYADAYSNRGN 3013
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+ A E E+AIA P A+A + G ++ + ++ +YE+ + +
Sbjct: 3014 TLMKMNQYKEALESYERAIALKPENADACFHQGNALQELKRYNESLASYEKAIAL 3068
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E+ +++ A+ Y+ A P + + V+ + ++A+ Y L++K
Sbjct: 1583 NRGNTLQELKRYEEALACYDSAIALKPENEQFYYHRAVVLHNMKRYEEALLNYDHVLALK 1642
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP-TYAEAYNNLGVLYRDAGSISLAID 121
P+ +++ +N G + T + + A ++ IA P AY+N GV+ + G A
Sbjct: 1643 PDCAEAYSNRGNILTGLKRYEEALASYDQVIALKPDNNLVAYSNRGVVLLELGRYRDAFL 1702
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMN 145
++E ++ + DS +A +R LA+
Sbjct: 1703 SFENTIEQNSDSADAYCHRGLALR 1726
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
LD+A Y+ LS P +L + + + A + ++A+A P +A + NN
Sbjct: 2918 RLDEAEALYREILSSSPEHFDALRLSATIAAQRHDSEKALALFDQALAIKPDHARSLNNR 2977
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR---LLAMNYINEG 150
G+ ++ A+ +YE+ + + PD +A NR L+ MN E
Sbjct: 2978 GIALQELKRYEEALASYERAIVLKPDYADAYSNRGNTLMKMNQYKEA 3024
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN+G A E+ +++ A+ YE A EA +N GV+ + A+ Y+ A+++
Sbjct: 223 YNMGNALLELQRYEEALASYEKAIALKVDYFEAYSNRGVVLLVLRRYEDALVSYEKAIAL 282
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY 99
KP+ +++ N +V + + A EKA++ P Y
Sbjct: 283 KPHHAEAYANQCLVLHEMERYEDALVSCEKALSLKPDY 320
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
LD+A Y+ LS P +L + + + + A + ++ I NP + + NN
Sbjct: 30 RLDEAEALYREILSSSPEHFDALQLSATIAAQRHEFEKAVTLFDQVIHINPVHPGSLNNR 89
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145
G + A+++YE+ + I PD +A NR + +
Sbjct: 90 GNALKALQRYEEALESYEKAIAIKPDYADAYSNRSVVLK 128
>gi|253996225|ref|YP_003048289.1| hypothetical protein Mmol_0852 [Methylotenera mobilis JLW8]
gi|253982904|gb|ACT47762.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8]
Length = 701
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 166/612 (27%), Positives = 258/612 (42%), Gaps = 101/612 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNP----------HCAEACNNLGVIYKDRDNLDKAV 52
NLG +F+ A +Y P HC ++LG N +A
Sbjct: 109 NLGNTLLAANRFEEAASYYHRVLKVKPREDEVRAALCHC---LSSLGNQAHTIGNFTQAE 165
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
C+Q AL + P ++ L NLG GK + AA+ +KA+ +P A+ +NNLG + R+
Sbjct: 166 ACFQEALQLGPQDARLLYNLGNAQRELGKPNDAAKQYQKALQLDPNDADTHNNLGNVQRE 225
Query: 113 AGSISLAIDAYEQCLKIDPD---------------------------------------- 132
G + LA+ +Y LK++P
Sbjct: 226 LGQLDLAVASYTTALKLNPKLYHAKVHLVHQKQHMCDWDGLEADIQQIRHWVMHEPSAQI 285
Query: 133 ---------SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE 183
S +A + R+ A N+ N + + ++L Q ++ NT P
Sbjct: 286 SPFAFLAMPSTSAEEQRICASNWANSRY------------AQLIQLGKQL-NFANTTSPN 332
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
+ I Y+S D+ H +++ I + HD ++ +S V R ++ K
Sbjct: 333 NKIRIAYLSADFRLHPLAFLISELIELHDKNRFETYAFSYGVNDKTSA---RARLEKSFD 389
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG- 302
+ DI + + A + IDILV+LTG T ++ G+ A +PA V V W+G+P T G
Sbjct: 390 QFHDIRTLSDIDAAKKIHSCGIDILVDLTGFTQTSRSGIAALRPAKVNVNWLGFPGTMGE 449
Query: 303 --------LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-- 352
P DY +TD+ P +T + E+L LP Y P+ P+ P
Sbjct: 450 MHQQNAPDTPLFDYLLTDAFITPADTTPHYAEKLALLP---YSYQPNDRKRPIGKAPTRQ 506
Query: 353 ---LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLST 408
L + F SFN KIT V +W R+L +PNS L ++ C + +
Sbjct: 507 ACNLPDNAFVFCSFNQSFKITADVFSIWLRLLNKLPNSVLWLLDCNTWA----KQNLWLA 562
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
++ G+ R+ P + + DH+ + D+ LDT PY TT ++L+MG+P +T AG
Sbjct: 563 AQRSGIAKERIVFAPRVNIA-DHLARHIHADLFLDTQPYNAHTTCSDALWMGLPVLTCAG 621
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
+ V SLL GL LI + EY ALQLA LA ++ L+D S + D
Sbjct: 622 DTFSSRVAGSLLQAAGLPQLITHSLVEYEARALQLAQQPNELAAIKAKLQDENMTSNLFD 681
Query: 529 GQNFALGLESTY 540
F L LE Y
Sbjct: 682 TAQFTLSLERIY 693
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 72 LGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
LG+VY + A + +E+A+A NP + N+ G+ R AG+I +I +++Q + + P
Sbjct: 42 LGLVYYQTNRNALAVKHLEQALAINPKQVDYLNHYGLALRAAGNIDASIKSFQQAILLQP 101
Query: 132 D----SRNAGQNRLLAMNYINEG 150
N G N LLA N E
Sbjct: 102 KDLDLQLNLG-NTLLAANRFEEA 123
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG++Y + AV+ + AL+I P LN+ G+ G +DA+ + ++AI P
Sbjct: 42 LGLVYYQTNRNALAVKHLEQALAINPKQVDYLNHYGLALRAAGNIDASIKSFQQAILLQP 101
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+ NLG A A Y + LK+ P
Sbjct: 102 KDLDLQLNLGNTLLAANRFEEAASYYHRVLKVKP 135
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 7/142 (4%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G+A D +I ++ A P + NLG + ++A Y L +KP
Sbjct: 77 GLALRAAGNIDASIKSFQQAILLQPKDLDLQLNLGNTLLAANRFEEAASYYHRVLKVKPR 136
Query: 65 -------FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
L++LG G A ++A+ P A NLG R+ G +
Sbjct: 137 EDEVRAALCHCLSSLGNQAHTIGNFTQAEACFQEALQLGPQDARLLYNLGNAQRELGKPN 196
Query: 118 LAIDAYEQCLKIDPDSRNAGQN 139
A Y++ L++DP+ + N
Sbjct: 197 DAAKQYQKALQLDPNDADTHNN 218
>gi|144897562|emb|CAM74426.1| TPR repeat [Magnetospirillum gryphiswaldense MSR-1]
Length = 749
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 237/483 (49%), Gaps = 41/483 (8%)
Query: 81 KMDAAAEMIEKAI---AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137
++D A +A+ A +PT A N L GS + A + L + PD+
Sbjct: 291 RLDIAEAAARRAVDLAADDPT---AINALAKSLAMRGSNAEAAACFRMALALAPDNAALH 347
Query: 138 QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLV-IGYVSPDYF 196
N + AM + G +LF +++G+ + S + D +R +V IGYVS D+
Sbjct: 348 SNLIHAMVHDESGSPSQLFAEAQNFGRYWEGRLSPMSPPPPLPDDDRRMVRIGYVSADFC 407
Query: 197 THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDI--YGIDEK 254
H+V+Y IE L HD Q + V Y ++D T R R V + WR + D
Sbjct: 408 DHAVAYLIEPLLRRHDRQRFHVTCYHVARRSDHVTDRLRGLVPR----WRTLPCDSDDFA 463
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRI---- 310
+AA +R D IDILV+L+GHTA N L M A +PAPVQV+ IGYP TTGL +DYR+
Sbjct: 464 AMAATIRADGIDILVDLSGHTAGNVLPMFALRPAPVQVSAIGYPGTTGLGRMDYRLVYGG 523
Query: 311 TDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKIT 370
+ D P E L+ P FL + A PV P P L G++TF + N AK +
Sbjct: 524 SPKGGDDPAFSS---ETLVPFP-AFLPFQAPAAAVPVGPPPVLERGYVTFAALNKFAKAS 579
Query: 371 PKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430
+ WARIL A+P +RLVV P +R F++ G + +V+++ + L+
Sbjct: 580 VGARRAWARILAALPTARLVVLAPPSQAAVIRAGFVAD----GAGAEQVEVIEELALD-G 634
Query: 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA 490
+ +DI+LD+FPY G TT S + GVP V + + + L
Sbjct: 635 WLALMEEIDIALDSFPYRGGTTAMMSDWRGVPLVALLPEGQGKDDD---------RRLYC 685
Query: 491 KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL---GLESTYRNMWHRY 547
++EDEYV A+ LASD+ L R L L+++ + +G N L LE +R +W Y
Sbjct: 686 RDEDEYVATAVALASDLDQLVERRAEL-PLIAR--LDEGANADLAIRALERLFREIWSTY 742
Query: 548 CKG 550
+G
Sbjct: 743 LEG 745
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
+P E GV + DN +A+ C++ L P+ +L NL QG A
Sbjct: 68 HPDHGEIGFEAGVGWLQADNQRQAITCFRRHLQHFPDHPGTLFNLAWALRRQGADSEAEA 127
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
++ + + P +A + NLG L D G+ + A A+E L+ D++ A LA+ +
Sbjct: 128 LLRRLLTVAPGHAAGWFNLGTLLADHGAHADAATAFETSLRCGFDAKPAMIG--LALATL 185
Query: 148 NEGHDD 153
+G D
Sbjct: 186 RQGRVD 191
>gi|319791963|ref|YP_004153603.1| hypothetical protein Varpa_1276 [Variovorax paradoxus EPS]
gi|315594426|gb|ADU35492.1| Tetratricopeptide repeat [Variovorax paradoxus EPS]
Length = 833
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 153/543 (28%), Positives = 246/543 (45%), Gaps = 45/543 (8%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
++ E Y++AL P LNNLG V G D A E+++KA+ +P A NLGV
Sbjct: 287 ESAELYKIALDSLPEHELLLNNLGTVNFRLGHFDTAIEVLKKALEVHPKQVLARCNLGVT 346
Query: 110 YRDAGSISLAIDAYEQCLKIDP-----------------DSRNAGQNRLLAMNYINEGHD 152
Y AG AI +EQCL+ DP D R + R ++ +
Sbjct: 347 YVMAGQSEAAIAQFEQCLRDDPNFMSAMVWMLGEKAHIADWRGVPELREKIATLLDTPGN 406
Query: 153 DK-----LFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLV------------IGYVSPDY 195
D+ + ++ D +R M + + + +P +GY S D+
Sbjct: 407 DQTVSSFILMSNYDDARRLMAWTQRSAALADRNVGIQPFADAGALRTSPRIRVGYYSFDF 466
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H V++ HD ++++V YS D R R + + D+ G ++
Sbjct: 467 RNHPVAHLTAELFARHDRKDFEVFAYS-YGPDDGHPARAR--IASSVENFVDMQGRSIQQ 523
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A +RED++DIL++L+G T K +MA AP Q+ W+GY T+G P DY ++D+
Sbjct: 524 MAERIREDEVDILIDLSGDTRGAKPQVMAYHAAPAQLMWLGYMGTSGTPNYDYLVSDNFL 583
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA---LTNGFITFGSFNNLAKITPK 372
PP T+ + E+L+RLPE F P T A L +F+ KI P+
Sbjct: 584 SPPGTEDCYSEKLLRLPETFQVIDSQRPTNPQKATRADHGLPEDAFVLCNFSQSFKIQPE 643
Query: 373 VLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
W RI+ +PN+ L + P + + E GL + R+ + P + ++ H+
Sbjct: 644 TFAAWVRIVRRIPNAVLWLAQGP---NGFETNLRAQWEAAGLPAERLIVSPRMPIDR-HL 699
Query: 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKN 492
L D+ +DTFPY+ T + L+ GVP + + G+ + SLL+ +GL L+A
Sbjct: 700 ARIGLADLFIDTFPYSSGATANDVLWAGVPLLALTGTTMVSRMAGSLLSAIGLPELVATT 759
Query: 493 EDEYVQLALQLASDVTALANLRMSLRDLM-SKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
DEYV+ A+ A+ LA LR L + ++ D F LE +R + R +G
Sbjct: 760 RDEYVEKAVHYATHRNELAVLRGRLAEAKDARRGYFDTPRFVRHLEDGFRQIAARSREGL 819
Query: 552 VPS 554
P+
Sbjct: 820 PPA 822
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y + KF A A P A NN G I +++ D+AV +Q AL +
Sbjct: 127 NLSAVYRQQKKFRQAREAAADATRLAPQAPAAWNNAGAIDMEQNRFDEAVLHFQQALKLD 186
Query: 63 PNFSQSLNNLGVVYTVQ 79
N++ + N+G + Q
Sbjct: 187 ANYTAAHKNIGKIRAHQ 203
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Query: 25 FHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
F+FN A +L ++ + + +L +A++ + N+ ++ NL VY Q K
Sbjct: 89 FYFNTR-ATIFMHLNLLAEAQQDLRRAIKAFA-------NYPEAYINLSAVYRQQKKFRQ 140
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A E A P A+NN G + + A+ ++Q LK+D + A +N
Sbjct: 141 AREAAADATRLAPQAPAAWNNAGAIDMEQNRFDEAVLHFQQALKLDANYTAAHKN 195
>gi|357142312|ref|XP_003572530.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 1001
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 163/607 (26%), Positives = 264/607 (43%), Gaps = 61/607 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A FY+ A + NNL +IYK + N A+ CY L
Sbjct: 386 LTNLGNIYMEWNLVTTAASFYKAAISVTSGLSSPLNNLALIYKQQGNYADAITCYTEVLR 445
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + +L N G + G+++ A + +A PT AEA+ NL Y+D+G + AI
Sbjct: 446 IDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPTMAEAHANLASAYKDSGHVETAI 505
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKRFMRL-----YSQYT 174
+Y+Q L + PD A N L + + + + D +F D +R +++ +
Sbjct: 506 VSYKQALHLRPDFPEAICNLLHTLQCVCDWENRDAMFRNVEDIIRRQIKMSVLPSVQPFH 565
Query: 175 SWDNTKDPERPLVI---------------------------------------GYVSPDY 195
+ DP L I GYVS D+
Sbjct: 566 AIAYPIDPMLALDISRKYAAHCSLIASRLGLPPFVHPPPVPVKAEGKYCRLRVGYVSSDF 625
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H +S+ + + H+ N +V Y A+ + D +R+++ + + D+ +
Sbjct: 626 GNHPLSHLMGSVFGMHNRDNIEVFCY-ALSQNDG--TEWRQRIQSEVEHFLDVSAMTSDM 682
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ +DKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 683 IARIINQDKIQILINLNGYTKGARNEIFALQPAPIQVSYMGFPGTTGASYIDYLVTDEFV 742
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNLA 367
P + E+L+ LP C+ + PV P G F FN L
Sbjct: 743 SPSCYAHIYSEKLVHLPHCYFVNDYKQKNRDCLNPVLPHKRSDYGLPEDKFIFACFNQLY 802
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P++ W IL VPNS L + P ++ R + G+ S ++ + + +
Sbjct: 803 KMDPEIFDRWCNILKRVPNSALWILRFPAAGET---RVRAHAAARGVRSDQI-IFTDVAM 858
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-K 486
+H++ +L D+ LDT TT + L+ G+P +T+ A V SL GL +
Sbjct: 859 KTEHIRRSALADLFLDTPLCNAHTTGTDILWAGLPMITLPLEKMATRVAGSLCLATGLGE 918
Query: 487 HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+I + EY A+ LA + L L L+ + P+ D + LE Y MW+
Sbjct: 919 EMIVSSMQEYEDRAVALAQNPADLQALTNKLKSVRMTCPLFDTARWVRNLERAYYKMWNL 978
Query: 547 YCKGDVP 553
YC G P
Sbjct: 979 YCCGRDP 985
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E D A+++Y+ A P A+A N G +YK A+ YQ AL +
Sbjct: 252 NLAGLFMEAGDLDKALLYYKEAIKLKPSFADAHLNQGNVYKAMGKPQDAIMSYQRALQAR 311
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NL +Y QG++D A +AI +P + EAYNN+G +D+G + AI+
Sbjct: 312 PDYAMAYGNLATIYYEQGQLDMAVRCYNQAIVCDPQFIEAYNNMGNALKDSGRVEEAINC 371
Query: 123 YEQCLKIDPDSRNAGQN 139
Y CL + + A N
Sbjct: 372 YRSCLALQANHPQALTN 388
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + DMA+ Y A +P EA NN+G KD +++A+ CY+ L+++
Sbjct: 320 NLATIYYEQGQLDMAVRCYNQAIVCDPQFIEAYNNMGNALKDSGRVEEAINCYRSCLALQ 379
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y + AA + AI+ + NNL ++Y+ G+ + AI
Sbjct: 380 ANHPQALTNLGNIYMEWNLVTTAASFYKAAISVTSGLSSPLNNLALIYKQQGNYADAITC 439
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + +A NR
Sbjct: 440 YTEVLRIDPTAADALVNR 457
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 2/151 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +DM I E A +P AE N+ +K++ ++D A+ Y A+ ++
Sbjct: 117 LGAIYYQIRNYDMCIEKNEEALAIDPQFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRS 176
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL YT +G+++ AA+ +A+A NP +A++NLG L + G I A Y
Sbjct: 177 NFCDAWSNLASAYTRKGRLNDAAQCCRQALAINPRLVDAHSNLGNLMKSQGFIQEAYSCY 236
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
+ L IDP A N LA ++ G DK
Sbjct: 237 IEALHIDPRFAIAWSN--LAGLFMEAGDLDK 265
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A H +P A A +NL ++ + +LDKA+ Y+ A+ +KP+F+ + N G VY G
Sbjct: 236 YIEALHIDPRFAIAWSNLAGLFMEAGDLDKALLYYKEAIKLKPSFADAHLNQGNVYKAMG 295
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
K A ++A+ A P YA AY NL +Y + G + +A+ Y Q + DP
Sbjct: 296 KPQDAIMSYQRALQARPDYAMAYGNLATIYYEQGQLDMAVRCYNQAIVCDP 346
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A A NP +A +NLG + K + + +A CY AL I
Sbjct: 184 NLASAYTRKGRLNDAAQCCRQALAINPRLVDAHSNLGNLMKSQGFIQEAYSCYIEALHID 243
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G +D A ++AI P++A+A+ N G +Y+ G AI +
Sbjct: 244 PRFAIAWSNLAGLFMEAGDLDKALLYYKEAIKLKPSFADAHLNQGNVYKAMGKPQDAIMS 303
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y++ L+ PD A N LA Y +G D
Sbjct: 304 YQRALQARPDYAMAYGN--LATIYYEQGQLD 332
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y A + +A +NL Y + L+ A +C + AL+I
Sbjct: 150 NMANAWKEKGDVDLAIRYYLTAIQLRSNFCDAWSNLASAYTRKGRLNDAAQCCRQALAIN 209
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ +P +A A++NL L+ +AG + A+
Sbjct: 210 PRLVDAHSNLGNLMKSQGFIQEAYSCYIEALHIDPRFAIAWSNLAGLFMEAGDLDKALLY 269
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y++ +K+ P +A N+
Sbjct: 270 YKEAIKLKPSFADAHLNQ 287
>gi|40063716|gb|AAR38497.1| TPR repeat protein [uncultured marine bacterium 583]
Length = 733
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 262/585 (44%), Gaps = 43/585 (7%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+A + + D A+ Y+ A P AEA NLG K+ LD AVECY+ AL+IK
Sbjct: 148 NLGIALKNLGQLDAAVECYKKALAIKPDYAEAHYNLGNALKNLGQLDAAVECYKKALAIK 207
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NNLG G++DAA + EKA+A P YAEAY+N G + R A+ +
Sbjct: 208 PDYADACNNLGNALKNLGQLDAAVKCYEKAVAIKPDYAEAYHNNGSVMRRLKRQDEALAS 267
Query: 123 YEQCLKIDPDSR----NAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWD- 177
YE + I P+ + ++ + + H + G++ + ++ D
Sbjct: 268 YESAIAIKPNLDFILGDLLSTKMSLCIWDDLAHRINELTKKINNGEKVISPFALLALIDD 327
Query: 178 ------------NTKDPE-------------RPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
N K P+ + + IGY S D+ H VS+ HD
Sbjct: 328 PEVQKKTAEIYANEKFPQSHVLSKIGRYPKHKKIRIGYFSADFRNHPVSHLTAELYEIHD 387
Query: 213 YQNYKVVVYS-AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVEL 271
+++ +S D +R + V + D+ + K VA + R +IDI V+L
Sbjct: 388 RNQFEIYAFSFGPDTEDEMNLRIKAGVDH----FHDVRTMSHKDVAILSRSVEIDIAVDL 443
Query: 272 TGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRL 331
G +++ + A AP+Q+++IGY T G DY + D P + ++ E++ L
Sbjct: 444 GGFNQDSRTEIFAMSAAPIQISYIGYAGTMGANYYDYLVADQTIIPEKNQKYCSEKIAYL 503
Query: 332 PECFLCYTPSPEAGPVCPTPAL---TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
P + + G + L GF+ F FNN KITP W RIL V S
Sbjct: 504 PSYQVNDSKQSPPGTIFTRKDLGLPETGFV-FCCFNNTYKITPTTFDGWGRILEQVDGSV 562
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L++ + + G+ R+ + L +++ Y + D+ LDT PY
Sbjct: 563 LLIYAD---NELAEINLTKEIVLRGINPSRL-IFGKRLPKPEYLARYRVADLFLDTLPYN 618
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
TT ++L MG+P +T G A S++ L LI +++Y LA++LA+
Sbjct: 619 AGTTASDALRMGLPVLTCMGKSFASREAASVINAFNLPELITTTQEQYESLAIELATKPE 678
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L ++ L + + +P+ D F LES Y M+ +Y +G P
Sbjct: 679 KLIIIKDKLVNNLPTAPLYDTPLFTRHLESAYLTMYEKYQQGLDP 723
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 85/138 (61%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ ++ + D A+ YE A P A ACNNLGV +D LD AV+ Y+ A++I
Sbjct: 79 YNLGLTLQDLGQLDAAVKSYEKAIAIKPDYANACNNLGVTLQDLGQLDAAVKSYEKAIAI 138
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+FS + NNLG+ G++DAA E +KA+A P YAEA+ NLG ++ G + A++
Sbjct: 139 KPDFSDANNNLGIALKNLGQLDAAVECYKKALAIKPDYAEAHYNLGNALKNLGQLDAAVE 198
Query: 122 AYEQCLKIDPDSRNAGQN 139
Y++ L I PD +A N
Sbjct: 199 CYKKALAIKPDYADACNN 216
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 82/137 (59%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV ++ + D A+ YE A P ++A NNLG+ K+ LD AVECY+ AL+IK
Sbjct: 114 NLGVTLQDLGQLDAAVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVECYKKALAIK 173
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ NLG G++DAA E +KA+A P YA+A NNLG ++ G + A+
Sbjct: 174 PDYAEAHYNLGNALKNLGQLDAAVECYKKALAIKPDYADACNNLGNALKNLGQLDAAVKC 233
Query: 123 YEQCLKIDPDSRNAGQN 139
YE+ + I PD A N
Sbjct: 234 YEKAVAIKPDYAEAYHN 250
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 92/161 (57%), Gaps = 3/161 (1%)
Query: 1 MYNL-GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL 59
+YNL G+ Y + + D A+ +E A P AE NLG+ +D LD AV+ Y+ A+
Sbjct: 43 LYNLSGICYKTIGELDEAVKSFEKALAIKPDYAEVHYNLGLTLQDLGQLDAAVKSYEKAI 102
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
+IKP+++ + NNLGV G++DAA + EKAIA P +++A NNLG+ ++ G + A
Sbjct: 103 AIKPDYANACNNLGVTLQDLGQLDAAVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAA 162
Query: 120 IDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
++ Y++ L I PD A N A+ N G D E ++
Sbjct: 163 VECYKKALAIKPDYAEAHYNLGNALK--NLGQLDAAVECYK 201
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN N G+ Y G++D A + EKA+A P YAE + NLG+ +D G + A+ +
Sbjct: 38 PNDPLLYNLSGICYKTIGELDEAVKSFEKALAIKPDYAEVHYNLGLTLQDLGQLDAAVKS 97
Query: 123 YEQCLKIDPDSRNAGQN 139
YE+ + I PD NA N
Sbjct: 98 YEKAIAIKPDYANACNN 114
>gi|348687602|gb|EGZ27416.1| hypothetical protein PHYSODRAFT_553979 [Phytophthora sojae]
Length = 986
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 172/615 (27%), Positives = 274/615 (44%), Gaps = 64/615 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A+ Y A P A A +N+G + K++ LD+A+ YQ A++I
Sbjct: 347 NLGNALKDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITID 406
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF+ + +N+G V+ +++ A + AI P + +AY+NL Y+D G + AI
Sbjct: 407 PNFADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITC 466
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYI----NEGHDDKLFEAHRDWG--------------- 163
Y + L + P +A N +M +I + HD + + D
Sbjct: 467 YRKALALRPHFPDAFANYFHSMVFICDWQSRKHDTETLQRFVDEQLSMDGVLPSVQPFHA 526
Query: 164 -------KRFMRLYSQYTS---------------WDNTKDPERPLVIGYVSPDYFTHSVS 201
+RF + +Y + + + ER L IGYVS D H ++
Sbjct: 527 LVYPLSMQRFQDISRRYAERAKLNVSLVDLPPMRFRSKRASER-LRIGYVSSDLGNHPLA 585
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ ++ HD Y+V Y+ D +I +R+++ + DI + A +
Sbjct: 586 HLMQNVFGMHDKFKYEVFCYA--TSPDDGSI-WRKQISGSVEHFVDICALSNGDAARTIH 642
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D I ILV L G+T + + A QPAPVQV+++G+ T G I Y + D+ PPE +
Sbjct: 643 ADGIHILVNLNGYTKGARNEIFALQPAPVQVSYMGFCGTLGADYIQYMVGDATVVPPEYR 702
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPV-----CPTPA---LTNGFITFGSFNNLAKITPKV 373
+ E+ I +P + A V CPT A + + F +FN + KI P
Sbjct: 703 RYFTEKQINMPHSYFVNDHKQSARDVLDTEKCPTRADYGVPDDKFVFCNFNQVYKIDPVT 762
Query: 374 LQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
W IL VPNS L +++ P ++R + + + D+ P ++H+
Sbjct: 763 FTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVAP----KNEHL 818
Query: 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKN 492
+ L D+ LDT TT C+ L+ G P VTM A V SLL + LI +
Sbjct: 819 KRGYLADLFLDTPECNAHTTGCDILWGGTPMVTMPKDRMATRVASSLLRAANMSELITNS 878
Query: 493 EDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG-- 550
+EY +LA+ LASD+ L LR L D + P+ D + + LE+ W R+ G
Sbjct: 879 LEEYEELAVALASDMDRLWELRRRLEDERLRCPLFDTERWVRNLETGLVMAWERHENGLA 938
Query: 551 ----DVPSLKRMEML 561
DVP + +E L
Sbjct: 939 PDNIDVPDIYDLEQL 953
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 77/137 (56%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E+ A+ FY A NP +A NNL Y ++AVE Y+MA+ +
Sbjct: 109 NLGNALKELGDLAGAVQFYVRAIKLNPRFGDAYNNLANCYMLLGQNNEAVETYKMAIMLD 168
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG +Y VQG+++ A E+AI A P++A A++NL L ++ G + AID
Sbjct: 169 PQLVDAHSNLGNLYKVQGRVEDAKLCYEQAIRAKPSFAIAWSNLAGLLKEDGQLEAAIDH 228
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + +++ PD +A N
Sbjct: 229 YREAIRLAPDFADAYSN 245
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + + A+ Y A P A NNLG KD+ + +A+ CY A +
Sbjct: 313 NLGNALRECGQLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEALHCYTTAARLL 372
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G V QGK+D A ++AI +P +A+AY+N+G +++D + AI
Sbjct: 373 PQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNFADAYSNMGNVFKDLCRLEEAIQC 432
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y +++ P +A N LA Y + G D +R
Sbjct: 433 YSTAIRLKPQFPDAYSN--LASAYKDGGRLDDAITCYR 468
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 2/149 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y + + + A+ Y++A +P +A +NLG +YK + ++ A CY+ A+ K
Sbjct: 143 NLANCYMLLGQNNEAVETYKMAIMLDPQLVDAHSNLGNLYKVQGRVEDAKLCYEQAIRAK 202
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NL + G+++AA + +AI P +A+AY+NLG ++AG + AI A
Sbjct: 203 PSFAIAWSNLAGLLKEDGQLEAAIDHYREAIRLAPDFADAYSNLGNALKEAGRVEEAIQA 262
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
Y+ L+I P+ A N LA Y + G
Sbjct: 263 YKSALQIRPNFAIAHGN--LASCYYDAGQ 289
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + + AI Y A P A+A +NLG K+ +++A++ Y+ AL I+
Sbjct: 211 NLAGLLKEDGQLEAAIDHYREAIRLAPDFADAYSNLGNALKEAGRVEEAIQAYKSALQIR 270
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF+ + NL Y G+M+ A AI P + +AYNNLG R+ G + A+
Sbjct: 271 PNFAIAHGNLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNALRECGQLEQAVTC 330
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ PD +A N
Sbjct: 331 YRTALQLKPDHPHAYNN 347
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y + + ++AI + A P+ +A NNLG ++ L++AV CY+ AL +K
Sbjct: 279 NLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNALRECGQLEQAVTCYRTALQLK 338
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + NNLG +G + A A P +A A++N+G + ++ G + A+
Sbjct: 339 PDHPHAYNNLGNALKDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAH 398
Query: 123 YEQCLKIDPDSRNAGQN 139
Y+Q + IDP+ +A N
Sbjct: 399 YQQAITIDPNFADAYSN 415
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y + + A + YE A P A A +NL + K+ L+ A++ Y+ A+ +
Sbjct: 177 NLGNLYKVQGRVEDAKLCYEQAIRAKPSFAIAWSNLAGLLKEDGQLEAAIDHYREAIRLA 236
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NLG G+++ A + + A+ P +A A+ NL Y DAG + LAI
Sbjct: 237 PDFADAYSNLGNALKEAGRVEEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMELAIHT 296
Query: 123 YEQCLKIDPDSRNAGQN 139
+ ++++P+ +A N
Sbjct: 297 FRHAIQLEPNFPDAYNN 313
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + + AI Y+ A P+ A A NL Y D ++ A+ ++ A+ ++
Sbjct: 245 NLGNALKEAGRVEEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMELAIHTFRHAIQLE 304
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NNLG G+++ A A+ P + AYNNLG +D G + A+
Sbjct: 305 PNFPDAYNNLGNALRECGQLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEALHC 364
Query: 123 YEQCLKIDPDSRNAGQN 139
Y ++ P A N
Sbjct: 365 YTTAARLLPQFAAAHSN 381
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + ++ +I + + P+ AEA NLG K+ +L AV+ Y A+ + P
Sbjct: 76 LGALHFQLGNLSESIFYNQQCIRVAPNFAEAYGNLGNALKELGDLAGAVQFYVRAIKLNP 135
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
F + NNL Y + G+ + A E + AI +P +A++NLG LY+ G + A Y
Sbjct: 136 RFGDAYNNLANCYMLLGQNNEAVETYKMAIMLDPQLVDAHSNLGNLYKVQGRVEDAKLCY 195
Query: 124 EQCLKIDP 131
EQ ++ P
Sbjct: 196 EQAIRAKP 203
>gi|197103965|ref|YP_002129342.1| TPR domain-containing protein [Phenylobacterium zucineum HLK1]
gi|196477385|gb|ACG76913.1| TPR domain protein [Phenylobacterium zucineum HLK1]
Length = 761
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 238/525 (45%), Gaps = 26/525 (4%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A + A A LG +Y D D ++A + AL ++P+ +L L D
Sbjct: 232 ALEADERQAWAHRELGGLYADTDR-ERANRHLRRALELQPDDLDNLFALAESLQRSRYGD 290
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL------AIDAYEQCLKIDPDSRNAG 137
AA IE+A A G+ + A I L A+DA + AG
Sbjct: 291 EAAH-IEEAYQVLRRAALPRTLSGLQKKIAAEIFLRVGDHAAVDALGSLSDLGRAFAGAG 349
Query: 138 QNRL---LAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPER-PLVIGYVSP 193
+ LA L E HR WG+R L ++ R L IG++S
Sbjct: 350 LHSGFMNLAARVRTPQDRRDLVEFHRQWGQRVEALAAREPVTTQAAPAGRTKLRIGFMSS 409
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDE 253
D H V +F ++D + ++V YS + +A + + + WR I +
Sbjct: 410 DLRAHPVGFFAMPLFQHYDRERFEVYCYS-YKQGEADRAQKMIESLVDAFRWRP--NISD 466
Query: 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS 313
+ A M+ +D++DIL+EL G T NKL +MA +PAP+ +W+GY N+ GL TID+ + D
Sbjct: 467 RDAAQMIADDQLDILIELGGSTHMNKLEVMAYKPAPLAASWLGYANSAGLSTIDFLVLDP 526
Query: 314 LADPPETKQKHVEELIRLPECFLC-----YTPSPEAGPVCPTPALTNGFITFGSFNNLAK 368
P + +E+ + LP+C+ Y P P NGF+TFG+ NN K
Sbjct: 527 FMQPADPALL-IEKPLLLPDCWYALAEGVYRDEPAVETTAPVE--RNGFVTFGTANNPYK 583
Query: 369 ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLN 428
P VL+ W RIL PNSR + +S R + G+ R+ P+
Sbjct: 584 YNPDVLRTWGRILARTPNSRFLFIRPEGGSESFRRHMTAAFAAEGVAPERILFEPV---R 640
Query: 429 HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL 488
H+ Y+ +D+SLDTFP G TTTCESL+MG P V++ G + S+L +GL L
Sbjct: 641 GQHLPHYNRLDMSLDTFPQTGGTTTCESLWMGAPVVSLVGEALYERLSYSVLNNIGLGDL 700
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
A+ Y + A LA+D + LR +LR M SP+ + +A
Sbjct: 701 CAETVAGYEETACALAADPARIGELRRTLRARMQASPLGRTKPWA 745
>gi|381159662|ref|ZP_09868894.1| alpha/beta hydrolase family protein,tetratricopeptide repeat
protein [Thiorhodovibrio sp. 970]
gi|380877726|gb|EIC19818.1| alpha/beta hydrolase family protein,tetratricopeptide repeat
protein [Thiorhodovibrio sp. 970]
Length = 818
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 178/311 (57%), Gaps = 5/311 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G A ++ + + A+ Y+ A P AEA N G KD L++A++ Y AL++K
Sbjct: 380 NRGTALDDLGRLEEALQAYDQALALKPDYAEAHFNRGNAVKDLGRLEEALQAYDQALALK 439
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ +N G G+++ A + ++A+A P +A+A++N G +D G + A+ +
Sbjct: 440 PDYAKAHSNRGTALKYLGRLEDALQAYDQALALKPDFADAHSNRGNALKDLGRLEDALQS 499
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
YEQ L+I P NRLL ++Y + D + A R +G+RF R + N DP
Sbjct: 500 YEQALRIAPQHPGTHSNRLLTLHYREDRADGAILSAARAFGRRFDR-SNAVVRHANRPDP 558
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
R L IGYVS D+ H V++F+E L H + +++ ++ + DA + R + +
Sbjct: 559 ARRLRIGYVSGDFRQHPVAFFLEPVLAQHRAEEVELIGFTTNARRDALSARLQAYLAG-- 616
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
W + G+++ AA++R IDILV+L+GHT +N+L + A +PAPVQ++W+GY TTG
Sbjct: 617 --WHSLVGLEDADAAALIRAQGIDILVDLSGHTGHNRLPVFAYRPAPVQLSWLGYVGTTG 674
Query: 303 LPTIDYRITDS 313
L T+DY + D
Sbjct: 675 LTTMDYVLADG 685
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 66/114 (57%)
Query: 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98
GV+ + L++A++ Y AL++KP+++++ +N G G+++ A + ++A+A P
Sbjct: 348 GVMLQALLRLEEALQAYDQALALKPDYAEAHSNRGTALDDLGRLEEALQAYDQALALKPD 407
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
YAEA+ N G +D G + A+ AY+Q L + PD A NR A+ Y+ D
Sbjct: 408 YAEAHFNRGNAVKDLGRLEEALQAYDQALALKPDYAKAHSNRGTALKYLGRLED 461
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
+L A Y+ L+ P +++L++LG V +G A +I +AI N + +
Sbjct: 288 DLQAAEAGYRNLLAQHPAHAEALHSLGFVLYQRGDPAGAEALIRRAIRNNDQVPAYHCHH 347
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145
GV+ + + A+ AY+Q L + PD A NR A++
Sbjct: 348 GVMLQALLRLEEALQAYDQALALKPDYAEAHSNRGTALD 386
>gi|357441255|ref|XP_003590905.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
gi|355479953|gb|AES61156.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
Length = 986
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 161/607 (26%), Positives = 260/607 (42%), Gaps = 61/607 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A +Y+ + + NNL +IYK + N A+ CY L
Sbjct: 371 LTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGNYADAISCYNEVLR 430
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + L N G Y G++ A + +AI PT AEA+ NL Y+D+G + A+
Sbjct: 431 IDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITVRPTMAEAHANLASAYKDSGHVEAAV 490
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR-------------- 165
+Y Q L + D A N L + + D D++F+ +R
Sbjct: 491 KSYRQALILRTDFPEATCNLLHTLQCVCCWEDRDQMFKEVEGIIRRQINMSVLPSVQPFH 550
Query: 166 -------------FMRLYSQYTSWDNTKDPERP-----------------LVIGYVSPDY 195
R Y+ + S ++ P L IGYVS D+
Sbjct: 551 AIAYPLDPMLALEISRKYAAHCSVIASRFSLPPFSHPAPIPIKQEGGYERLRIGYVSSDF 610
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H +S+ + + H+ +N +V Y A+ D +R+++ + + D+ +
Sbjct: 611 GNHPLSHLMGSVFGMHNRKNVEVFCY-ALSPNDG--TEWRQRIQSEAEHFVDVSAMTSDT 667
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ EDKI IL+ L G+T + + A +PAPVQV+++G+P TTG IDY +TD
Sbjct: 668 IAKLINEDKIQILINLNGYTKGARNEIFAMKPAPVQVSYMGFPGTTGATYIDYLVTDEFV 727
Query: 316 DPPETKQKHVEELIRLPECFLCY--------TPSPEAGPVCPTPALTNGFITFGSFNNLA 367
P + + E+++ LP C+ P P L F FN L
Sbjct: 728 SPLQYAHIYSEKIVHLPHCYFVNDYKQKNQDVLDPNCQPKRSDYGLPEDKFLFACFNQLY 787
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P++ W IL VPNS L + P +R R + + + + + + + +
Sbjct: 788 KMDPEIFNTWCNILKRVPNSALWLLKFP-AAGEMRLRAYAAAQGVQPDQI---IFTDVAM 843
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-K 486
+H++ SL D+ LDT TT + L+ G+P VT+ A V SL GL +
Sbjct: 844 KGEHIRRSSLADLFLDTPLCNAHTTGTDILWAGLPMVTLPLEKMATRVAGSLCISTGLGE 903
Query: 487 HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+I + EY A+ LA + L L L+ + P+ D + L+ Y MW+
Sbjct: 904 EMIVSSMKEYEDRAVSLALNRPKLQALTDKLKSVRLTCPLFDTNRWVRNLDRAYFKMWNL 963
Query: 547 YCKGDVP 553
+C G P
Sbjct: 964 HCTGQRP 970
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E F+ A+ +Y+ A P +A NLG +YK +A+ CYQ AL +
Sbjct: 237 NLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIACYQHALQTR 296
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN+ + NL ++ QG++D A ++AIA +P + EAYNNLG +D G + AI
Sbjct: 297 PNYGMAYGNLASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQC 356
Query: 123 YEQCLKIDPDSRNAGQN 139
Y QCL + P+ A N
Sbjct: 357 YNQCLSLQPNHPQALTN 373
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 3 NLGVAYG-------EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECY 55
N G+AYG E + DMAI+ Y+ A +P EA NNLG KD +++A++CY
Sbjct: 298 NYGMAYGNLASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCY 357
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
LS++PN Q+L NLG +Y + AAA + + + YNNL ++Y+ G+
Sbjct: 358 NQCLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGN 417
Query: 116 ISLAIDAYEQCLKIDPDSRNAGQNR 140
+ AI Y + L+IDP + + NR
Sbjct: 418 YADAISCYNEVLRIDPLAADGLVNR 442
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ FDM + E A PH AE N+ +K++ N+D A+ Y +A+ ++P
Sbjct: 102 LGAIYYQLHDFDMCVAKNEEALRIEPHFAECYGNMANAWKEKGNIDLAIRYYLIAIELRP 161
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF+ + +NL Y +G++ AA+ +A+A NP +A++NLG L + G + A Y
Sbjct: 162 NFADAWSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLMKAQGLVQEAYSCY 221
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
+ L+I P A N LA ++ G ++ + +++
Sbjct: 222 LEALRIQPTFAIAWSN--LAGLFMESGDFNRALQYYKE 257
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + A A NP +A +NLG + K + + +A CY AL I+
Sbjct: 169 NLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQ 228
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G + A + ++A+ P++ +AY NLG +Y+ G AI
Sbjct: 229 PTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIAC 288
Query: 123 YEQCLKIDPD 132
Y+ L+ P+
Sbjct: 289 YQHALQTRPN 298
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A A +NL ++ + + ++A++ Y+ A+ +KP+F + NLG VY G
Sbjct: 221 YLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALG 280
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A + A+ P Y AY NL ++ + G + +AI Y+Q + DP
Sbjct: 281 MPQEAIACYQHALQTRPNYGMAYGNLASIHYEQGQLDMAILHYKQAIACDP 331
>gi|357441257|ref|XP_003590906.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
gi|355479954|gb|AES61157.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
Length = 744
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/607 (26%), Positives = 260/607 (42%), Gaps = 61/607 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A +Y+ + + NNL +IYK + N A+ CY L
Sbjct: 129 LTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGNYADAISCYNEVLR 188
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + L N G Y G++ A + +AI PT AEA+ NL Y+D+G + A+
Sbjct: 189 IDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITVRPTMAEAHANLASAYKDSGHVEAAV 248
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR-------------- 165
+Y Q L + D A N L + + D D++F+ +R
Sbjct: 249 KSYRQALILRTDFPEATCNLLHTLQCVCCWEDRDQMFKEVEGIIRRQINMSVLPSVQPFH 308
Query: 166 -------------FMRLYSQYTSWDNTKDPERP-----------------LVIGYVSPDY 195
R Y+ + S ++ P L IGYVS D+
Sbjct: 309 AIAYPLDPMLALEISRKYAAHCSVIASRFSLPPFSHPAPIPIKQEGGYERLRIGYVSSDF 368
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H +S+ + + H+ +N +V Y A+ D +R+++ + + D+ +
Sbjct: 369 GNHPLSHLMGSVFGMHNRKNVEVFCY-ALSPNDG--TEWRQRIQSEAEHFVDVSAMTSDT 425
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ EDKI IL+ L G+T + + A +PAPVQV+++G+P TTG IDY +TD
Sbjct: 426 IAKLINEDKIQILINLNGYTKGARNEIFAMKPAPVQVSYMGFPGTTGATYIDYLVTDEFV 485
Query: 316 DPPETKQKHVEELIRLPECFLCY--------TPSPEAGPVCPTPALTNGFITFGSFNNLA 367
P + + E+++ LP C+ P P L F FN L
Sbjct: 486 SPLQYAHIYSEKIVHLPHCYFVNDYKQKNQDVLDPNCQPKRSDYGLPEDKFLFACFNQLY 545
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P++ W IL VPNS L + P +R R + + + + + + + +
Sbjct: 546 KMDPEIFNTWCNILKRVPNSALWLLKFP-AAGEMRLRAYAAAQGVQPDQI---IFTDVAM 601
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-K 486
+H++ SL D+ LDT TT + L+ G+P VT+ A V SL GL +
Sbjct: 602 KGEHIRRSSLADLFLDTPLCNAHTTGTDILWAGLPMVTLPLEKMATRVAGSLCISTGLGE 661
Query: 487 HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+I + EY A+ LA + L L L+ + P+ D + L+ Y MW+
Sbjct: 662 EMIVSSMKEYEDRAVSLALNRPKLQALTDKLKSVRLTCPLFDTNRWVRNLDRAYFKMWNL 721
Query: 547 YCKGDVP 553
+C G P
Sbjct: 722 HCTGQRP 728
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 3 NLGVAYG-------EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECY 55
N G+AYG E + DMAI+ Y+ A +P EA NNLG KD +++A++CY
Sbjct: 56 NYGMAYGNLASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCY 115
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
LS++PN Q+L NLG +Y + AAA + + + YNNL ++Y+ G+
Sbjct: 116 NQCLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGN 175
Query: 116 ISLAIDAYEQCLKIDPDSRNAGQNR 140
+ AI Y + L+IDP + + NR
Sbjct: 176 YADAISCYNEVLRIDPLAADGLVNR 200
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 70/126 (55%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
F+ A+ +Y+ A P +A NLG +YK +A+ CYQ AL +PN+ + NL
Sbjct: 6 FNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIACYQHALQTRPNYGMAYGNLA 65
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
++ QG++D A ++AIA +P + EAYNNLG +D G + AI Y QCL + P+
Sbjct: 66 SIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLSLQPNH 125
Query: 134 RNAGQN 139
A N
Sbjct: 126 PQALTN 131
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
+ ++A++ Y+ A+ +KP+F + NLG VY G A + A+ P Y AY NL
Sbjct: 5 DFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAIACYQHALQTRPNYGMAYGNL 64
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDP 131
++ + G + +AI Y+Q + DP
Sbjct: 65 ASIHYEQGQLDMAILHYKQAIACDP 89
>gi|225430656|ref|XP_002270163.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Vitis vinifera]
gi|296085167|emb|CBI28662.3| unnamed protein product [Vitis vinifera]
Length = 986
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/572 (26%), Positives = 253/572 (44%), Gaps = 61/572 (10%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
+NL +IYK + N A+ CY L I P + L N G + G++ A + AI
Sbjct: 406 SNLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTFKEIGRVSEAIQDYIHAITI 465
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DK 154
PT AEA+ NL Y+D+G + A+ +Y+Q L + PD A N L + + D +K
Sbjct: 466 RPTMAEAHANLASAYKDSGHVEAAVKSYKQALVLRPDFPEATCNLLHTLQCVCSWEDREK 525
Query: 155 LF-----------------------------------EAHRDWGKRFMRLYSQYT--SWD 177
+F + R + + S+Y S++
Sbjct: 526 MFIEVEGIIRRQIKMSVLPSVQPFHAIAYPIDPLLALDISRKYAAHCSLIASRYALPSFN 585
Query: 178 N-------TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
+ ++ L IGY+S D+ H +S+ + + H+ +N +V Y+ +
Sbjct: 586 HPNPVPVKSEGGSGRLRIGYLSSDFGNHPLSHLMGSVFGMHNRENVEVFCYAL---SPND 642
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
+ +R+++ + + D+ + +A ++ EDKI IL+ L G+T + + A QPAP+
Sbjct: 643 STEWRQRIQSEAEHFIDVSAMSSDMIAKLINEDKIQILINLNGYTKGARNEIFAMQPAPI 702
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPE----AGP 346
QV+++G+P TTG IDY +TD P + E+L+ LP C+ + P
Sbjct: 703 QVSYMGFPGTTGASYIDYLVTDEFVSPLCYAHIYSEKLVHLPHCYFVNDYKQKNRDVLDP 762
Query: 347 VCPTPALTNGF----ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR 402
C G F FN L K+ P++ W IL VPNS L + P +
Sbjct: 763 NCQHKRSDYGLPEDKFIFACFNQLYKMDPEIFNTWCNILKRVPNSALWLLRFPAAGEM-- 820
Query: 403 HRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVP 462
R S GL+ R+ + + + H+H++ +L D+ LDT TT + L+ G+P
Sbjct: 821 -RLRSYAVAQGLQPDRI-IFTDVAMKHEHIRRSALADLFLDTPLCNAHTTGTDILWAGLP 878
Query: 463 CVTMAGSVHAHNVGVSLLTKVGL-KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
VT+ A V SL GL + +I + EY + A+ LA + L L L+ +
Sbjct: 879 MVTLPLEKMATRVAGSLCLATGLGEEMIVSSMKEYEEKAVSLAMNRPKLQALTNKLKAVR 938
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
P+ D + LE Y MW+ +C G P
Sbjct: 939 MSCPLFDTARWVRNLERAYFKMWNVHCSGSRP 970
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E A+ +Y+ A P A+A NLG +YK +A+ CYQ AL +
Sbjct: 237 NLAGLFMESGDLTRALQYYKEAVKLKPTFADAYLNLGNVYKALGMPQEAIVCYQRALQTR 296
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++ + N+ Y QG+MD A ++AI + + EAYNNLG +D G I AI
Sbjct: 297 PEYAMAYGNMAGTYYEQGQMDMAIVHYKQAIECDSGFLEAYNNLGNALKDVGRIDEAIQC 356
Query: 123 YEQCLKIDPDSRNAGQN 139
Y QCL + P+ A N
Sbjct: 357 YHQCLALQPNHPQALTN 373
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 17/259 (6%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G Y ++ FDM I E A +P AE N+ +K++ N+D A+ Y +A+ ++P
Sbjct: 102 MGAIYYQLHDFDMCIARNEEALQIDPRFAECYGNMANAWKEKGNVDLAIRYYLIAIELRP 161
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL Y +G+++ AA+ +A+A NP +A++NLG + G I A Y
Sbjct: 162 NFCDAWSNLASAYMRKGRLNEAAQCCRQALAINPLLVDAHSNLGNFMKAQGLIQEAYSCY 221
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD-- 181
+ L+I P A N LA ++ G + + +++ K Y + N
Sbjct: 222 IEALRIQPSFAIAWSN--LAGLFMESGDLTRALQYYKEAVKLKPTFADAYLNLGNVYKAL 279
Query: 182 --PERPLVIG----YVSPDYFTHSVSYFIEAPLVYHDYQ-NYKVVVYSAVVKADAKTIRF 234
P+ +V P+Y +++Y A Y Q + +V Y ++ D+ F
Sbjct: 280 GMPQEAIVCYQRALQTRPEY---AMAYGNMAGTYYEQGQMDMAIVHYKQAIECDSG---F 333
Query: 235 REKVMKKGGIWRDIYGIDE 253
E G +D+ IDE
Sbjct: 334 LEAYNNLGNALKDVGRIDE 352
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ Y E + DMAIV Y+ A + EA NNLG KD +D+A++CY L+++
Sbjct: 305 NMAGTYYEQGQMDMAIVHYKQAIECDSGFLEAYNNLGNALKDVGRIDEAIQCYHQCLALQ 364
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN Q+L NLG +Y + AAA + +A + ++NL ++Y+ G+ + AI
Sbjct: 365 PNHPQALTNLGNIYMEWNMVAAAATYYKATLAVTTGLSAPFSNLAIIYKQQGNYADAISC 424
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + + NR
Sbjct: 425 YNEVLRIDPLAADGLVNR 442
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y +A P+ +A +NL Y + L++A +C + AL+I
Sbjct: 135 NMANAWKEKGNVDLAIRYYLIAIELRPNFCDAWSNLASAYMRKGRLNEAAQCCRQALAIN 194
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG QG + A +A+ P++A A++NL L+ ++G ++ A+
Sbjct: 195 PLLVDAHSNLGNFMKAQGLIQEAYSCYIEALRIQPSFAIAWSNLAGLFMESGDLTRALQY 254
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ +K+ P +A N
Sbjct: 255 YKEAVKLKPTFADAYLN 271
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A A NP +A +NLG K + + +A CY AL I+
Sbjct: 169 NLASAYMRKGRLNEAAQCCRQALAINPLLVDAHSNLGNFMKAQGLIQEAYSCYIEALRIQ 228
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NL ++ G + A + ++A+ PT+A+AY NLG +Y+ G AI
Sbjct: 229 PSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKPTFADAYLNLGNVYKALGMPQEAIVC 288
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y++ L+ P+ A N +A Y +G D
Sbjct: 289 YQRALQTRPEYAMAYGN--MAGTYYEQGQMD 317
>gi|350561806|ref|ZP_08930644.1| Tetratricopeptide TPR_1 repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780838|gb|EGZ35156.1| Tetratricopeptide TPR_1 repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 765
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 159/598 (26%), Positives = 255/598 (42%), Gaps = 59/598 (9%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEAC-NNLGVIYKDRDNLDKAVECYQMALS 60
+ LG A + + A Y A A NNLG++ +D +A + A++
Sbjct: 179 FQLGRALAATGRVERAERAYREALERGDVARGAVLNNLGLLLRDSGRRQEAAGALRSAVA 238
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++ NL + Y QG++ A ++ P A + GV+Y I A+
Sbjct: 239 ADSGNWRARGNLALAYLEQGRIGNAQREVDALNREFPDAAGVWAASGVVYERQDRIDAAL 298
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW------------------ 162
AY++ + + S + RL + D + F+ RDW
Sbjct: 299 TAYQRAIDLGDRSPAVRRARLRMAQSLC---DWRSFDEDRDWLRQQEGSDYADVLDLFGL 355
Query: 163 ------------------GKRFMRLYSQYTSWDN--TKDPERPLVIGYVSPDYFTHSVSY 202
G+R R S + P L + Y+S D+ H+ ++
Sbjct: 356 MAVPGLTDADLAERTRPVGERLARTASPSLARQGPAAAPPRTRLRVAYLSGDFHEHATAW 415
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR-EKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ HD ++++ YS D T+R R E + + D+ +D++ VA +
Sbjct: 416 LMAGVFELHDRNGFEIIAYS-FGPDDGSTMRRRLETAFDR---FHDVSALDDRAVAQRIA 471
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
+D IDILV+L G+T + + A +PAP+QV ++GYP T G P +DY I D + P E
Sbjct: 472 DDGIDILVDLKGYTRGARPLIAAYRPAPIQVNYLGYPGTMGAPFMDYLIADRIVLPREQF 531
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFG----SFNNLAKITPKVLQVW 377
E LP + C + E G PT G G F+N K+TP V W
Sbjct: 532 AHFSERAAWLPGTYQCNDRAREVG--APTTRAEQGLSEAGPVLCGFHNPYKVTPTVFDAW 589
Query: 378 ARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS 436
R+L P++ L +++ P ++R EQ G++ R+ P L N +H+ +
Sbjct: 590 CRLLRDSPDAVLWLLEPVPAVAANLRR----EAEQRGVDPGRLVFAPR-LRNPEHLARLA 644
Query: 437 LMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEY 496
L D+ LDT P TT ++L++GVP +T G A VG SLL GL L+ + + Y
Sbjct: 645 LADLFLDTLPVNAHTTASDALWVGVPVLTCTGETFAGRVGASLLAAAGLSELVTDSLETY 704
Query: 497 VQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
A +L + LA L+M L + + D + F LE YR +W R+ G P+
Sbjct: 705 EAKAQELLENPDRLAELKMRLNEQRDHCRLFDTKGFTRNLERLYRAIWERHRAGLPPA 762
>gi|336288597|gb|AEI30651.1| TPR repeat-containing protein [uncultured microorganism]
Length = 592
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 240/492 (48%), Gaps = 30/492 (6%)
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
L + P +L G+ G++ A A+ + EA+ NLG + G
Sbjct: 102 LQLDPRAPAALVQRGMAAQRAGRLTDAITAYRDALRQDAHLPEAWINLGTALQTCGDAPA 161
Query: 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDN 178
A A +Q L + P R A N L+ Y G D A +R L+ T+
Sbjct: 162 ARTALQQALALAPHDRRAASNLLMGGQY-QAGLDSATLRADT---QRAGALWGTATTPPA 217
Query: 179 TKDPERP---LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA-VVKADAKTIRF 234
+ P P L +GY+S D H V + + L HD +V VY+ DA T R
Sbjct: 218 VQGPIGPGERLRVGYLSSDLCAHPVGWLLAPVLAAHDRAVLEVHVYAGRAAPPDAMTARL 277
Query: 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTW 294
R W DI G+D+ AA++R +D+LVEL GHT ++LG++A +PAPVQ++W
Sbjct: 278 RAAAEH----WHDIAGLDDAAAAALMRSHGLDLLVELGGHTEGSRLGVVALRPAPVQLSW 333
Query: 295 IGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT 354
+G+ +TGL +D + PP ++ + E L RLP YTP P+A P P+L
Sbjct: 334 LGWFASTGLAAVDAVVLGEALAPPGSEAFYTEPLERLPRPHFAYTPPPDAPAPAPPPSLR 393
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC---CDSV-RHRFLSTLE 410
G +TFGSFNN AK++ + +W+++L AVP S+LV+K F D++ R+RF
Sbjct: 394 LGSVTFGSFNNPAKLSDATVALWSQLLRAVPGSQLVLKWSAFADPQLDAMTRNRF----- 448
Query: 411 QLGLESLRVDLLPLILLNHDHMQA-YSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
G ++ RV P H M A Y +DI+LD P++G TT E+L MGVP +T+ G
Sbjct: 449 --GAQAPRVQ--PRGASPHAQMLAEYGDIDIALDPHPFSGLLTTLEALAMGVPVLTLPGP 504
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLR----MSLRDLMSKSP 525
++L +GL L+A Y++ A LA+D + R LR+ ++ S
Sbjct: 505 RPVSRQTAAVLQAMGLDTLVAATPQAYIERAAALAADTATRSAWRSPGPQGLRERLAASS 564
Query: 526 VCDGQNFALGLE 537
V DG A LE
Sbjct: 565 VGDGAGLARALE 576
>gi|407774610|ref|ZP_11121908.1| hypothetical protein TH2_11919 [Thalassospira profundimaris WP0211]
gi|407282652|gb|EKF08210.1| hypothetical protein TH2_11919 [Thalassospira profundimaris WP0211]
Length = 734
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/586 (25%), Positives = 261/586 (44%), Gaps = 42/586 (7%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV + K D A Y P AEA NNLG I K L +A CY A++ K
Sbjct: 151 NLGVILERLGKLDEAEECYRAVIARTPEFAEAHNNLGNILKSAGKLAEAQACYLNAIARK 210
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
++ + NL + ++ A + K + P AEA+ LG S+ A++A
Sbjct: 211 ADYVDAHYNLANTLRERDLLEDAKQQYFKTLKLQPKLAEAWYGLGQTMAALKSLPEAVEA 270
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH----------------------- 159
Y++ L + P A +L +++ + LF H
Sbjct: 271 YQRALAVKPGYVPAMVEQLREQSHLCDWRACDLFAQHAAQLGITGDAALPFPLLPFEDNP 330
Query: 160 -------RDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
R++ K + + ++ T R + +GY S D+ H+ + + L +HD
Sbjct: 331 AHQLARSRNFAKSLLPPAAPVSTIKPTSPEGRKIQLGYFSADFHDHATMFLMAGILRHHD 390
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+++ V+S D R++V+ + D+ + + + + R +DI ++L
Sbjct: 391 RSKFEIFVFSYGKNKDGAQ---RDQVLDNVDQFFDVRDMSDGDLITLARGQNLDIAIDLK 447
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G+T +++L A + AP+Q++++GYP T G IDY + D + PPE + + E++I LP
Sbjct: 448 GYTRDSRLEPFAARLAPLQISYLGYPGTLGCDFIDYIVADPVVVPPEQRSGYHEKIIYLP 507
Query: 333 ECFLCYTPSPEAGPVCPTPAL----TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
+C+ + E T A +GF+ F NN KI P +W R++ V S
Sbjct: 508 DCYQPNDNTREISANAMTRAELGLPEDGFV-FCCLNNNYKIMPTEFAIWMRVMAKVEGSV 566
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L + C D + + E+ G+ R+ + + +H+ D+ +DTF
Sbjct: 567 LWLWCN---NDVAKENLRAAAEKQGISGDRL-IFAGYMPQSEHLARLRHADLFIDTFHVN 622
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
TT ++L+ G+P VT+AG A V SLL+ VGL+ LI++ + Y +L L+LA +
Sbjct: 623 AHTTASDALWAGLPVVTLAGKQFAARVAASLLSAVGLRELISETPEAYEELILKLAQNPD 682
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
L+++R L P+ D + + G E + + G+ S
Sbjct: 683 MLSDIRTKLAANRQIKPLFDTEGYTRGFEQGLERAFAQRLAGEAFS 728
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%)
Query: 26 HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA 85
P A +NLGVI + LD+A ECY+ ++ P F+++ NNLG + GK+ A
Sbjct: 140 RLQPDMVAAKSNLGVILERLGKLDEAEECYRAVIARTPEFAEAHNNLGNILKSAGKLAEA 199
Query: 86 AEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
AIA Y +A+ NL R+ + A Y + LK+ P
Sbjct: 200 QACYLNAIARKADYVDAHYNLANTLRERDLLEDAKQQYFKTLKLQP 245
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 48 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
L A + + + ++P+ + +NLGV+ GK+D A E IA P +AEA+NNLG
Sbjct: 128 LSDAEQALRNVVRLQPDMVAAKSNLGVILERLGKLDEAEECYRAVIARTPEFAEAHNNLG 187
Query: 108 VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ + AG ++ A Y + D +A N
Sbjct: 188 NILKSAGKLAEAQACYLNAIARKADYVDAHYN 219
>gi|15229253|ref|NP_187074.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
gi|75336082|sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC; AltName:
Full=Protein SECRET AGENT
gi|6721161|gb|AAF26789.1|AC016829_13 putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|18139887|gb|AAL60196.1|AF441079_1 O-linked N-acetyl glucosamine transferase [Arabidopsis thaliana]
gi|20259324|gb|AAM13988.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|21436429|gb|AAM51415.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|110742062|dbj|BAE98963.1| O-linked GlcNAc transferase like protein [Arabidopsis thaliana]
gi|332640535|gb|AEE74056.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
Length = 977
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 166/607 (27%), Positives = 261/607 (42%), Gaps = 61/607 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M NLG Y E A ++ + NNL +IYK + N A+ CY L
Sbjct: 362 MANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISCYNEVLR 421
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + +L N G Y G++ A + AI PT AEA+ NL Y+D+G + AI
Sbjct: 422 IDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLASAYKDSGHVEAAI 481
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR--FMRLYSQYTSWD 177
+Y+Q L + PD A N L + + D K+F +R M + +
Sbjct: 482 TSYKQALLLRPDFPEATCNLLHTLQCVCCWEDRSKMFAEVESIIRRQINMSVLPSVQPFH 541
Query: 178 NTKDPERPLVIGYVSPDY---------------FTHSV-------------------SYF 203
P P++ +S Y FTH S F
Sbjct: 542 AIAYPIDPILALEISRKYAAHCSIIASRFGLPPFTHPAGLPVKREGGFKRLRIGYVSSDF 601
Query: 204 IEAPLVY--------HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
PL + H+ +N +V Y+ + A+ T +R+++ + + D+ +
Sbjct: 602 GNHPLSHLMGSVFGMHNRENVEVFCYA--LSANDNT-EWRQRIQSEAEHFLDVSAMSSDA 658
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ +DKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 659 IAKIINQDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFV 718
Query: 316 DPPETKQKHVEELIRLPECFLCY--------TPSPEAGPVCPTPALTNGFITFGSFNNLA 367
P + + E+L+ LP C+ P + P L F FN L
Sbjct: 719 SPLQYAHIYSEKLVHLPHCYFVNDYKQKNQDVLDPNSKPKRSDYGLPEDKFIFACFNQLY 778
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P+++ W IL VPNS L + P + RF + G++ ++ + + +
Sbjct: 779 KMDPEIVNTWCNILKRVPNSALWLLRFPAAGEM---RFRTYAAAQGVQPDQI-IFTDVAM 834
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH 487
+H++ L D+ LDT G TT + L+ GVP +T+ A V SL GL H
Sbjct: 835 KSEHIRRSVLADVILDTPLCNGHTTGTDVLWAGVPMITLPLEKMATRVAGSLCLATGLGH 894
Query: 488 -LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+I + +EY + A+ LA + L L LR P+ D + LE +Y MW+
Sbjct: 895 GMIVNSLEEYEEKAVSLALNKPKLQALTKELRASRLTCPLFDTMRWVKNLERSYFKMWNL 954
Query: 547 YCKGDVP 553
+C G P
Sbjct: 955 HCSGQQP 961
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 76/138 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ Y E + D+AI Y+ A +P EA NNLG KD +D+AV CY L+++
Sbjct: 296 NIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQ 355
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN Q++ NLG +Y M A+ + + +A + +NNL ++Y+ G+ S AI
Sbjct: 356 PNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISC 415
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + +A NR
Sbjct: 416 YNEVLRIDPLAADALVNR 433
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E + A+ +Y+ A P +A NLG +YK +A+ CYQ AL ++
Sbjct: 228 NLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMR 287
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + + N+ +Y QG++D A ++A++ +P + EAYNNLG +D G + A+
Sbjct: 288 PNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRC 347
Query: 123 YEQCLKIDPDSRNAGQN 139
Y QCL + P+ A N
Sbjct: 348 YNQCLALQPNHPQAMAN 364
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G Y ++ ++DM I E A P AE N+ +K++ + D+A+ Y +A+ ++P
Sbjct: 93 IGAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRP 152
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF+ + +NL Y +G++ A + ++A++ NP +A++NLG L + G I A Y
Sbjct: 153 NFADAWSNLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCY 212
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
+ ++I P A N LA ++ G ++ + +++
Sbjct: 213 LEAVRIQPTFAIAWSN--LAGLFMESGDLNRALQYYKE 248
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 71/129 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D AI +Y +A P+ A+A +NL Y + L +A +C Q ALS+
Sbjct: 126 NMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALSLN 185
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ PT+A A++NL L+ ++G ++ A+
Sbjct: 186 PLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQY 245
Query: 123 YEQCLKIDP 131
Y++ +K+ P
Sbjct: 246 YKEAVKLKP 254
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + A + A NP +A +NLG + K + + +A CY A+ I+
Sbjct: 160 NLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQ 219
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G ++ A + ++A+ P + +AY NLG +Y+ G + AI
Sbjct: 220 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMC 279
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNT-KD 181
Y+ L++ P+S A N +A Y +G D ++ R R Y + N KD
Sbjct: 280 YQHALQMRPNSAMAFGN--IASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKD 337
Query: 182 PER 184
R
Sbjct: 338 IGR 340
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
F A+ + + NP + +G IY D + + AL I+P F++ N+
Sbjct: 69 FKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMA 128
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP-- 131
+ +G D A AI P +A+A++NL Y G +S A +Q L ++P
Sbjct: 129 NAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALSLNPLL 188
Query: 132 -DSRNAGQNRLLAMNYINEGH 151
D+ + N + A I+E +
Sbjct: 189 VDAHSNLGNLMKAQGLIHEAY 209
>gi|452964763|gb|EME69797.1| SPY protein [Magnetospirillum sp. SO-1]
Length = 794
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 160/566 (28%), Positives = 248/566 (43%), Gaps = 35/566 (6%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG A +M + D A Y +P A A N GVI + + N +AV Y A+++
Sbjct: 245 YNLGRALHDMGRLDEACAVYGQVVALDPGHASAHLNRGVILRKQKNYAEAVAAYDRAIAL 304
Query: 62 KP-NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+P N LN V+Y + G+ A AIA P AEA++ L + +
Sbjct: 305 EPGNAHAHLNRSKVLYDM-GRHQEALASCRDAIALKPEDAEAHSELAHVRKQLCDWEGLD 363
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
E+CL + AG ++ ++L A RL++ + +
Sbjct: 364 RDEEKCLSLV--RAGAGGVDPFVFLSLSSTQAEQLACA---------RLWAADIAARAKR 412
Query: 181 DPERPLV----------IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
P P V +GY+S D+ H V Y + HD Q ++V YS +
Sbjct: 413 SPALPAVADGGDAGRIRLGYLSADFRDHPVGYLVANLFERHDRQRFEVFAYSYGPDDGSP 472
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
T R E+ + + + D+ + + +R D IDILV+LTG+T +++ ++A +PAP+
Sbjct: 473 TRRRLEQGVDR---FVDLRSLTHADAVSRIRRDGIDILVDLTGYTLHSRTDILAARPAPI 529
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT 350
QV ++GY T G DY + D P + E ++ LP C+L P A P P
Sbjct: 530 QVNYLGYAGTLGGDFADYILADPTILPMAEQASVTERIVHLPNCYLPSDPDRAAVPGTPA 589
Query: 351 PA---LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLS 407
L + +F+N KI P + VW R+L VP S L + S R
Sbjct: 590 RGACGLPEDGVILCAFHNAYKINPPLFDVWMRVLAQVPGSVLWL-----LDGSARANLCR 644
Query: 408 TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
+ G++ R+ P + + ++ + L D+ LDT PY + ++L+MGVP VT
Sbjct: 645 EAKACGIDPGRLVFAPRVGIGA-YLARHRLADLYLDTLPYNAHGSAADALWMGVPVVTCL 703
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G V S+L GL L+ + +Y +L L LA D A LR L + S S +
Sbjct: 704 GRTFPGRVAASVLKAAGLPELVTRTPAQYEELVLALARDSERRAGLRRRLAEAKSASALF 763
Query: 528 DGQNFALGLESTYRNMWHRYCKGDVP 553
D F +E+ + MW R G P
Sbjct: 764 DNARFTRDIETAFTRMWQRRVAGKPP 789
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LG+ + +I + PH AEAC NLG+ Y+ LD+AV+ + A +
Sbjct: 109 FGLGLVTSAQGRLAESIGHFRDGLALAPHDAEACCNLGLAYRAAGRLDEAVDAFARAARL 168
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P +++ NLG G+ AAE +KA+ +P + E +LG+ + G + A+
Sbjct: 169 APGLAKAHGNLGGALFAAGRWAEAAEAWKKALVLDPNHPEVEADLGIALANLGRLDEAVQ 228
Query: 122 AYEQCLKIDP 131
A+E+ +++DP
Sbjct: 229 AFERAVRLDP 238
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 61/114 (53%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
+P+ E +LG+ + LD+AV+ ++ A+ + P NLG G++D A
Sbjct: 202 LDPNHPEVEADLGIALANLGRLDEAVQAFERAVRLDPRHPVFHYNLGRALHDMGRLDEAC 261
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+ + +A +P +A A+ N GV+ R + + A+ AY++ + ++P + +A NR
Sbjct: 262 AVYGQVVALDPGHASAHLNRGVILRKQKNYAEAVAAYDRAIALEPGNAHAHLNR 315
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y GV + + ++ E A P N ++ + L +A +
Sbjct: 40 LYAFGVLLAQTGRLGESLGHLERAARLAPDDGRIGRNFALVLQAAGRLPEAEREFLRLRE 99
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+P+ ++ LG+V + QG++ + +A P AEA NLG+ YR AG + A+
Sbjct: 100 CEPDQAEHRFGLGLVTSAQGRLAESIGHFRDGLALAPHDAEACCNLGLAYRAAGRLDEAV 159
Query: 121 DAYEQCLKIDP 131
DA+ + ++ P
Sbjct: 160 DAFARAARLAP 170
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P AE LG++ + L +++ ++ L++ P+ +++ NLG+ Y G++D A +
Sbjct: 101 EPDQAEHRFGLGLVTSAQGRLAESIGHFRDGLALAPHDAEACCNLGLAYRAAGRLDEAVD 160
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+A P A+A+ NLG AG + A +A+++ L +DP+
Sbjct: 161 AFARAARLAPGLAKAHGNLGGALFAAGRWAEAAEAWKKALVLDPN 205
>gi|301094298|ref|XP_002896255.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
gi|262109650|gb|EEY67702.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
Length = 977
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 169/613 (27%), Positives = 271/613 (44%), Gaps = 64/613 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A+ Y A P A A +N+G + K++ LD+A+ YQ A++I
Sbjct: 347 NLGNALKDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITID 406
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF+ + +N+G V+ +++ A + AI P + +AY+NL Y+D G + AI
Sbjct: 407 PNFADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITC 466
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYI----NEGHDDKLFEAHRDWG--------------- 163
Y + L + P +A N +M +I + D + + D
Sbjct: 467 YRKALALRPQFPDAFANYFHSMVFICDWQSRKQDTETLQRFVDEQLSVADVLPSVQPFHA 526
Query: 164 -------KRFMRLYSQYTS---------------WDNTKDPERPLVIGYVSPDYFTHSVS 201
+RF + +Y + + + ER L IGYVS D H ++
Sbjct: 527 LVYPLSMQRFQDISRRYAERAKMNVQLVELSPMRFKSKRASER-LRIGYVSSDLGNHPLA 585
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ +++ HD + Y+V Y+ D +I +R+++ + DI + A +
Sbjct: 586 HLMQSVFGMHDERKYEVFCYA--TSPDDGSI-WRKQISGSVEHFVDICALSNGDAARTIH 642
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D I +LV L G+T + + A QPAPVQV+++G+ T G I Y + D+ PPE +
Sbjct: 643 ADGIHVLVNLNGYTKGARNEIFALQPAPVQVSYMGFCGTLGADYIHYMVGDATVVPPEYR 702
Query: 322 QKHVEELIRLPECFLCYTPSPEAGPV-----CPTPA---LTNGFITFGSFNNLAKITPKV 373
+ E+ I +P + A V CPT A + F +FN + KI P
Sbjct: 703 RYFTEKQINMPHSYFVNDHKQSARDVLDTEKCPTRADYGVPEDKFVFCNFNQVYKIDPVT 762
Query: 374 LQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
W IL VPNS L +++ P ++R + + + D+ P +H+
Sbjct: 763 FTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVAP----KDEHL 818
Query: 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKN 492
+ L D+ LDT TT C+ L+ G P VTM A V SLL + LI +
Sbjct: 819 KRGYLADLFLDTPECNAHTTGCDILWGGTPMVTMPKDRMATRVASSLLRAANMSELITNS 878
Query: 493 EDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG-- 550
+EY +LA+ LASD+ L LR L + P+ D Q + LE+ W R+ G
Sbjct: 879 LEEYEELAVALASDMDRLWELRRRLEEERLNCPLFDTQRWVRNLETGLCMAWERHENGLA 938
Query: 551 ----DVPSLKRME 559
DVP + +E
Sbjct: 939 PDHIDVPDIYDLE 951
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + A+ Y A P A NNLG KD+ + +A+ CY A +
Sbjct: 313 NLGNALRECGHLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEALHCYTTAARLL 372
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G V QGK+D A ++AI +P +A+AY+N+G +++D + AI
Sbjct: 373 PQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNFADAYSNMGNVFKDLCRLEEAIQC 432
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y +++ P +A N LA Y + G D +R
Sbjct: 433 YSTAIRLKPQFPDAYSN--LASAYKDGGRLDDAITCYR 468
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 2/149 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y + + + A+ Y++A +P +A +NLG +YK + L A CY A+ +K
Sbjct: 143 NLANCYMLLGQTEEAVETYKMAIMLDPRLVDAHSNLGNLYKVQGRLVDAKHCYAQAIRVK 202
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NL + G++DAA E +AI P +A+AY+NLG +++G + AI A
Sbjct: 203 PSFAIAWSNLAGLLKDDGQLDAAVEHYREAIRLAPDFADAYSNLGNALKESGRVDEAIQA 262
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
Y+ L+I P+ A N LA Y + G
Sbjct: 263 YKSALQIRPNFAIAHGN--LASCYYDAGQ 289
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E+ A+ FY A NP +A NNL Y ++AVE Y+MA+ +
Sbjct: 109 NLGNALKELGDVAGAVQFYVRAIKLNPRFGDAYNNLANCYMLLGQTEEAVETYKMAIMLD 168
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG +Y VQG++ A +AI P++A A++NL L +D G + A++
Sbjct: 169 PRLVDAHSNLGNLYKVQGRLVDAKHCYAQAIRVKPSFAIAWSNLAGLLKDDGQLDAAVEH 228
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + +++ PD +A N L G D+ +A++
Sbjct: 229 YREAIRLAPDFADAYSN--LGNALKESGRVDEAIQAYK 264
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A+ Y A P A+A +NLG K+ +D+A++ Y+ AL I+PNF+ + NL
Sbjct: 221 QLDAAVEHYREAIRLAPDFADAYSNLGNALKESGRVDEAIQAYKSALQIRPNFAIAHGNL 280
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
Y G+M+ A AI P + +AYNNLG R+ G + A+ Y L++ PD
Sbjct: 281 ASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNALRECGHLEQAVTCYRTALQLKPD 340
Query: 133 SRNAGQN 139
+A N
Sbjct: 341 HPHAYNN 347
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y + A Y A P A A +NL + KD LD AVE Y+ A+ +
Sbjct: 177 NLGNLYKVQGRLVDAKHCYAQAIRVKPSFAIAWSNLAGLLKDDGQLDAAVEHYREAIRLA 236
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NLG G++D A + + A+ P +A A+ NL Y DAG + LAI
Sbjct: 237 PDFADAYSNLGNALKESGRVDEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMELAIHT 296
Query: 123 YEQCLKIDPDSRNAGQN 139
+ ++++P+ +A N
Sbjct: 297 FRHAIQLEPNFPDAYNN 313
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y + + ++AI + A P+ +A NNLG ++ +L++AV CY+ AL +K
Sbjct: 279 NLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNALRECGHLEQAVTCYRTALQLK 338
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + NNLG +G + A A P +A A++N+G + ++ G + A+
Sbjct: 339 PDHPHAYNNLGNALKDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAH 398
Query: 123 YEQCLKIDPDSRNAGQN 139
Y+Q + IDP+ +A N
Sbjct: 399 YQQAITIDPNFADAYSN 415
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + D AI Y+ A P+ A A NL Y D ++ A+ ++ A+ ++
Sbjct: 245 NLGNALKESGRVDEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMELAIHTFRHAIQLE 304
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NNLG G ++ A A+ P + AYNNLG +D G + A+
Sbjct: 305 PNFPDAYNNLGNALRECGHLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEALHC 364
Query: 123 YEQCLKIDPDSRNAGQN 139
Y ++ P A N
Sbjct: 365 YTTAARLLPQFAAAHSN 381
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + ++ +I + + P AEA NLG K+ ++ AV+ Y A+ + P
Sbjct: 76 LGALHFQLGNLSESIFYNQQCIRVAPDFAEAYGNLGNALKELGDVAGAVQFYVRAIKLNP 135
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
F + NNL Y + G+ + A E + AI +P +A++NLG LY+ G + A Y
Sbjct: 136 RFGDAYNNLANCYMLLGQTEEAVETYKMAIMLDPRLVDAHSNLGNLYKVQGRLVDAKHCY 195
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
Q +++ P A N LA ++G D E +R+
Sbjct: 196 AQAIRVKPSFAIAWSN--LAGLLKDDGQLDAAVEHYRE 231
>gi|399992912|ref|YP_006573152.1| hypothetical protein PGA1_c17330 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398657467|gb|AFO91433.1| hypothetical protein PGA1_c17330 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 585
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 238/533 (44%), Gaps = 12/533 (2%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A F P A + + + A++ AL ++P + L+ +G + + K+
Sbjct: 52 ALVFEPENATLHAEIASSFMQEKKYELALKHLMGALKLEPTSPKWLSAIGTILFLMDKLS 111
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
A E +P A + L + ++ D + +D D N +
Sbjct: 112 DAVGFFEAVYQLDPENAMNVSRLVQSQMNLCDWAVYQDQKNKLRILDNDPANG--DPFTT 169
Query: 144 MNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
+ Y+++G K + K + +D T +R + +GY S D+F H+ +
Sbjct: 170 LLYVDDGAFQKKRVVMKTKKKATISEQKVARKFDRTPVADRKIRVGYFSCDFFNHATMFL 229
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
+ HD +++ +Y + D R++V++ +R I G+ ++ VA + R D
Sbjct: 230 MARHFELHDRDKFEIYIYDYSEEPDNV---MRQRVLRSADCYRQIQGVKDEDVAELARAD 286
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
+DI ++L G+T + + + + APVQ++++GYP TTG+PT+DY + D + P E ++
Sbjct: 287 GLDIAIDLKGYTKHARPAIFGFRAAPVQISYLGYPGTTGMPTMDYFLADPVTVPKEGRRH 346
Query: 324 HVEELIRLPECFLCYTPS---PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARI 380
E+++ +P C+ S PE P L + F SFNN K+TP +W +
Sbjct: 347 FSEKILYMPNCYQVNDNSRAHPEEKPTRADMGLPENAVVFCSFNNHNKVTPAEFDIWMDL 406
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L V NS L D VR L E G+ + R+ + DH+ L DI
Sbjct: 407 LKDVDNSVLWFLA---AADVVRANILKEAEARGVPADRI-VFAGRCSTPDHVARLPLADI 462
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LDTF TT E L+ GVP VT G A V S++T VG LIA+ ++EY LA
Sbjct: 463 FLDTFACNAHTTASEMLWSGVPVVTKPGEQFAARVAASIVTAVGCPELIAETDEEYRALA 522
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L+LA+ LR L+ + +P+ D + + E+ RY G P
Sbjct: 523 LRLATQPEERQALREKLKANIPSTPLYDTEQYVRDFEALMEKAIQRYDDGLKP 575
>gi|83311456|ref|YP_421720.1| SPY protein [Magnetospirillum magneticum AMB-1]
gi|82946297|dbj|BAE51161.1| SPY protein [Magnetospirillum magneticum AMB-1]
Length = 798
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 158/599 (26%), Positives = 263/599 (43%), Gaps = 64/599 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
++GVA ++ + + A + A +P NLG +D L+ A E Y +++
Sbjct: 211 DMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVA 270
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + + N GV++ G+ D A ++ + +P A+ N G +AG + A+D+
Sbjct: 271 PDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGRVEDALDS 330
Query: 123 YEQCLKIDPDSRNA-----------------GQNRLLAMNYINEGH---DDKLF------ 156
+ L++ PD +A L + +G D ++F
Sbjct: 331 FRSALRLMPDDADALCELVNLRKVICDWDGLEAEEALCRRQVADGKAGIDPQVFMSIPAT 390
Query: 157 --EAHR---DWGKRF----------MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
E R WGK + L + S +K + +GY+S D+ TH V+
Sbjct: 391 PAEQRRCGTLWGKMITEDRAHAVHGLDLAPRAVSPAGSK-----IRLGYISADFRTHPVA 445
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ + HD ++V YS D+ R E + + D+ + + A +
Sbjct: 446 HLMAGVFERHDRSRFEVSAYSIGPYQDSDMRRRLEAAFDR---FVDLEAVGSAEAARRIH 502
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D IDILV+LTG+T + + ++AC+PAP+QV ++G+ T G+ +DY +TD+ P +
Sbjct: 503 GDGIDILVDLTGYTKHCRPEILACRPAPIQVNFLGFTATMGVNWMDYILTDAFVAPQARQ 562
Query: 322 QKHVEELIRLPECFLCYTP-SPEAGPVCPTPA--LTNGFITFGSFNNLAKITPKVLQVWA 378
E L+ +P C+L + +P PV P A L + FNN K +V +WA
Sbjct: 563 DGFAEALVHMPHCYLPFGDLAPVGEPVQPRSAYGLPEDAFVYCGFNNPFKFRAEVFDLWA 622
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH----DHMQA 434
IL AVP L ++ D R+ + G++ R LI +HM
Sbjct: 623 DILRAVPQGVLWLRED---NDYSRNNLGREIAARGIDPAR-----LIFAQRTDFAEHMAR 674
Query: 435 YSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNED 494
+ L D+ LD PY TT ++L+ G+P +T G A V SLL+ +GL LI ++ +
Sbjct: 675 HRLADLFLDCLPYNAHTTASDALWAGLPVLTRVGETFASRVAGSLLSGLGLPELITESAE 734
Query: 495 EYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
EY + A+ LAS L L+ L +P + F LE+ + M R G P
Sbjct: 735 EYRERAIALASRPEELRALKDRLEVNRLTAPQFKSEVFTRDLEAAFLRMAERSRAGLAP 793
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A ++ A+ + A P+ AE ++GV ++A EC++ A+ +
Sbjct: 177 NLGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMELD 236
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P NLG G+++ AAE+ K IA P +A A+ N GV+++ G A+ +
Sbjct: 237 PGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVAS 296
Query: 123 YEQCLKIDPDSRNAGQNRLLAM 144
Y++ L++DP + A NR A+
Sbjct: 297 YDRVLELDPANGPAWLNRGKAL 318
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LG+ +FD AI ++ EA NLG+ + LD+A++ + A +
Sbjct: 108 FGLGLVVSAQGRFDEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEAIDAFAKAAEL 167
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P +++ NLG G+ A +A+A P +AE ++GV G A +
Sbjct: 168 APALAKAHGNLGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAE 227
Query: 122 AYEQCLKIDPDSRNAGQN 139
+ + +++DP + G N
Sbjct: 228 CFRRAMELDPGNPAHGYN 245
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P AE LG++ + D+A+ +Q L++ ++ NLG+ G++D A +
Sbjct: 100 EPDRAEHRFGLGLVVSAQGRFDEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEAID 159
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
KA P A+A+ NLG AG + A+ A+ + L ++P+
Sbjct: 160 AFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAWGRALALEPN 204
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 56/131 (42%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y GV + + ++ A P N ++ + L ++ +
Sbjct: 39 LYAYGVLLAQTGRLPQSLDHLSRAARLAPEDGRIGRNFALVLQAAGRLPESEREFGRLRD 98
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+P+ ++ LG+V + QG+ D A ++ +A EA NLG+ R AG + AI
Sbjct: 99 REPDRAEHRFGLGLVVSAQGRFDEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEAI 158
Query: 121 DAYEQCLKIDP 131
DA+ + ++ P
Sbjct: 159 DAFAKAAELAP 169
>gi|406830056|ref|ZP_11089650.1| hypothetical protein SpalD1_00412 [Schlesneria paludicola DSM
18645]
Length = 728
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 161/591 (27%), Positives = 260/591 (43%), Gaps = 67/591 (11%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG A + D A+ +A +P+ AEA LG R N +V + AL +
Sbjct: 146 FNLGSALLAAGRLDDAVPILRVAATLDPNLAEAWAGLGEALLKRGNTRSSVGPLRRALEL 205
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+ +S L G+ + A +A +P + + +G + + A++
Sbjct: 206 KPDDGESRYWLAGALQNCGQFEEALLCYLQAAERHPDAPDVWFGIGRCQLECKRFTEAVE 265
Query: 122 AYEQCLKIDPDSRNA--GQNRLL--------AMNYIN----EGHDD-------------- 153
A+++CLK++PD A Q + L AM + +G D
Sbjct: 266 AFQKCLKLEPDHSAAIHEQGKTLFKLGCVEQAMKALRLATKKGSKDIETLALQNMAVMIP 325
Query: 154 --------KLFEAHRDWGKRFMRLYSQYTSWDNTKDP-ERPLVIGYVSPDYFTHSVSYFI 204
+ E + WG+R + + +DP PL IGYVS + + +
Sbjct: 326 GNPTDTNRTVLEVRQTWGRRLV----SRPQGPHLRDPGTGPLRIGYVSSFFQGANWMKPV 381
Query: 205 EAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK-GGIWRDIYGIDEKKVAAMVRED 263
A + HD + +++ ++S DA R + DI G + VAA +
Sbjct: 382 WALINRHDREQFQIELFS-----DASLDRIEHGYRPDPRDQFHDITGQSNEAVAARIAAR 436
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
IDILV+L G++ +L + A +PAP+ V W TTGL DY I D P + +
Sbjct: 437 GIDILVDLNGYSDMARLPLFALRPAPIIVAWFNMYATTGLDCFDYLIGDESVIPAKEESF 496
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCA 383
+ E ++RLP +L + + P P +T G +T G + KIT +V+ WA IL
Sbjct: 497 YTERILRLPNSYLAFEVDHPVPDITPPPVVTTGQLTIGCLASQYKITDQVVATWADILRG 556
Query: 384 VPNSRLVVKCKPFC----CDSVRHRFLSTLEQLGLESLRVDLLPLILLN-HDHMQ---AY 435
P ++++++ C+ + RF + G+ R LIL +H+Q Y
Sbjct: 557 SPKAQMLIRNSALGRTEHCEHLSQRFAAK----GISRDR-----LILEGPAEHLQFLSTY 607
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+ +D ++D+FPY+G TTT E+L+ GVP VT G VSLL GL + + +
Sbjct: 608 NRIDFAVDSFPYSGGTTTMEALWQGVPVVTFNGDRWVSRTSVSLLKSAGLDEFVRSSVRD 667
Query: 496 YVQLALQLASDV---TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
Y ++LA+ + L LR +R + SPVCD A +E YR M
Sbjct: 668 YTDFCIRLANSTDTPSKLEALRADIRQRLRASPVCDAAALARSMEHCYRQM 718
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ ++ E+ +FD A+ + A P+ E NN+G + K A++ ++ A+++
Sbjct: 78 HEFALSLAELNEFDKALAETQEADRLKPNSPEILNNIGCLLKRMGRPLDAIKYHEQAVTV 137
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+ NLG G++D A ++ A +P AEA+ LG G+ ++
Sbjct: 138 TAENAVLSFNLGSALLAAGRLDDAVPILRVAATLDPNLAEAWAGLGEALLKRGNTRSSVG 197
Query: 122 AYEQCLKIDPDSRNAGQNR 140
+ L++ PD G++R
Sbjct: 198 PLRRALELKPDD---GESR 213
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
+ E P A A + + + + DKA+ Q A +KPN + LNN+G +
Sbjct: 62 YLERFVALEPENAAARHEFALSLAELNEFDKALAETQEADRLKPNSPEILNNIGCLLKRM 121
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G+ A + E+A+ A NLG AG + A+ +DP+
Sbjct: 122 GRPLDAIKYHEQAVTVTAENAVLSFNLGSALLAAGRLDDAVPILRVAATLDPN 174
>gi|86137175|ref|ZP_01055753.1| TPR repeat protein [Roseobacter sp. MED193]
gi|85826499|gb|EAQ46696.1| TPR repeat protein [Roseobacter sp. MED193]
Length = 741
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 265/593 (44%), Gaps = 53/593 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG + + D A+ Y+ A + A NN+ D L +A + A +
Sbjct: 130 SLGDVHRAQGQIDNALALYKKALSLDGDTLSALNNMANTLTDLGRLAEAEPLLERACKLA 189
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + L N V G+++ A +E+A P + A NL L G AI
Sbjct: 190 PKSAVILFNYSNVLLRTGRVEQAKTFLEQATELAPELSGAQYNLAQLQSLDGDKEAAIKR 249
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINE--------------GHDDK--------LFEAHR 160
+E L+ P ++L ++N+ G K FE +
Sbjct: 250 FEHILETTPSDDRTRADKLHVQAHLNDWSWMEEYQQFRRQLGLTSKPCSAFASLTFEDNP 309
Query: 161 DWGKRFMRLYS-----QYTSWD-------NTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
D + ++ YS Q S T P+R L IGY S D+ H+ +
Sbjct: 310 DLLRLRIQAYSNAALPQVKSATPLPAELIGTDRPDR-LRIGYFSSDFHDHATMRLMAGLF 368
Query: 209 VYHDYQNYKVVVYS-AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
HD + ++ YS DA R +V + I++DI+ + + + V DK+DI
Sbjct: 369 EAHDQSRFDIIAYSYDTAPEDA----MRRRVSQAVTIFKDIHQLTDAEATQQVLADKLDI 424
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
++L G T NN++ + A + AP+ ++++G+P T G IDY I D + P +++ E
Sbjct: 425 AIDLKGFTGNNRMTLFANRLAPLHMSYLGFPGTLGSTAIDYFIGDHITCPAGSERYFEEH 484
Query: 328 LIRLPECF------LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
LIRLP + ++ C P NGF+ F SFN+ KITP +W R+L
Sbjct: 485 LIRLPHSYQVNDDKRVFSGRQYTRKDCGLP--DNGFV-FCSFNSSYKITPVEFDIWMRLL 541
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
V +S L + C ++ + ++ G + R+ P I +H+ + D+
Sbjct: 542 DQVEDSVLWLLD---CSETSKTNLRKEAKRRGQDPDRLIFAPRIA-QEEHLARHRAADLF 597
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTF TT ++L+ G+P +T+ G A VG SL++ +GL +IAK+ +Y AL
Sbjct: 598 LDTFVVNAHTTASDALWAGLPVLTLPGRQFASRVGASLVSAMGLPEMIAKSAADYEARAL 657
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
+LA+D+ ALA+LR L+ +P+ D + F LE + + RY +G P+
Sbjct: 658 ELANDLDALASLRSKLQRNRLSTPLFDTKGFTKALEQGFDMAYARYLQGLPPA 710
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
N LG + NLD+A C A + P ++LG V+ QG++D A + +KA++
Sbjct: 95 NTLGQCHLKSQNLDEAATCLNKACELNPKDPAIFSSLGDVHRAQGQIDNALALYKKALSL 154
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ A NN+ D G ++ A E+ K+ P S
Sbjct: 155 DGDTLSALNNMANTLTDLGRLAEAEPLLERACKLAPKS 192
>gi|392378891|ref|YP_004986051.1| protein of unknown function; putative TPR domain [Azospirillum
brasilense Sp245]
gi|356880373|emb|CCD01322.1| protein of unknown function; putative TPR domain [Azospirillum
brasilense Sp245]
Length = 670
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 266/593 (44%), Gaps = 55/593 (9%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG+ + + A Y A P A A N GV+ + + + A + A+S+
Sbjct: 83 FNLGLTLQVLGRTAEAADAYGEAARLMPRFAPAPCNQGVLLRALGHHEAAETALRRAVSL 142
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P NLG +G+ +AAA A+ P AEA+ NLG++ ++AG ++ ++
Sbjct: 143 DPTLVPGWLNLGTAVQERGQPEAAAHCYRNALTLRPDLAEAHANLGLVVKEAGHLADSLP 202
Query: 122 AYEQCLKID-PDS----------------------RNAGQNRLLAMNYINEGHDDKLFEA 158
++E+ L + PD+ R+A L++ + H +F
Sbjct: 203 SFERALALGLPDAGGVLAQLVQQMRHLCRWNGLAERSAQLAALVSGGGTRQVHP-WIFLG 261
Query: 159 HRDWGKRFMRLYSQYTSWDNTKDPERP----------LVIGYVSPDYFTHSVSYFIEAPL 208
+ +Y W P L + Y+S D+ H+ + I +
Sbjct: 262 EGAGPAAELACARRYADWRAQGIAAMPVRRDAGSRGRLRVAYLSADFHEHATAALIAELI 321
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR--DIYGIDEKKVAAMVREDKID 266
HD + +VV S D +R R G R D+ AA +R D +D
Sbjct: 322 ERHDRERVEVVGCS-YGPDDGGPMRRR----LTGAFDRFVDLAACSHADAAARIRADGVD 376
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
ILV+L G+T + + + A +PAPVQ W+GYP T G IDY I D L P + + + E
Sbjct: 377 ILVDLKGYTQHARPEIAAHRPAPVQAQWLGYPGTMGAGFIDYVIGDPLITPFDHQPFYAE 436
Query: 327 ELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFITFGSFNNLAKITPKVLQVWARIL 381
+++LP C Y P+ P+ PTP+ L + F FN KITP + +W R+L
Sbjct: 437 RIVQLPAC---YQPNDRRRPIGPTPSRAACGLPERGVVFCCFNAAYKITPALFDLWCRLL 493
Query: 382 CAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
AVP+S L ++ P ++R + + G+ + R+ P +H+ Y L D+
Sbjct: 494 RAVPDSVLWLLDSHPEASANLRREAV----RRGVAADRLVFAPR-RPPAEHLARYRLADL 548
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LDT P TT ++L+ G+P +T+AG A VG+SLL VGL L ++ +Y A
Sbjct: 549 FLDTTPVGAHTTASDALWAGLPVLTVAGKGFASRVGMSLLRAVGLPELAVRSPADYEAAA 608
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
++LA D +A L+ L ++P+ D A LE Y MW + G P
Sbjct: 609 VRLAGDPDGIARLKARLMAERERAPLFDTDRLARALERAYATMWDIHMAGKPP 661
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P A A + G + R +A ++ ALS P+F + NLG+ V G+ AA+
Sbjct: 41 TPEEAVARSAYGEALRRRGRAAEAEAHHRAALSWLPDFGGNHFNLGLTLQVLGRTAEAAD 100
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+A P +A A N GVL R G A A + + +DP
Sbjct: 101 AYGEAARLMPRFAPAPCNQGVLLRALGHHEAAETALRRAVSLDP 144
>gi|329851008|ref|ZP_08265765.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
C19]
gi|328839854|gb|EGF89426.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
C19]
Length = 804
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 194/383 (50%), Gaps = 12/383 (3%)
Query: 154 KLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
+L H WG R + + + + +G++S D H V+YF L +D
Sbjct: 413 RLLGYHTTWGNRVSQRVASNRIDAKPRGKRDKIRVGFMSSDLRNHPVTYFALPLLDSYDR 472
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ ++V YS + R + +W + +D VA + D++DIL EL G
Sbjct: 473 ERFEVYCYSFYEREADGHQRLIADTVDHFRLWPKMADVD---VARGIAADELDILFELGG 529
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
TA NK+ +MA +PAPVQV+W+GYP++ GLP IDY + D +PP+T+ E+ LPE
Sbjct: 530 STAMNKIEVMAYRPAPVQVSWLGYPHSIGLPEIDYILVDPYINPPDTRLL-AEKPFELPE 588
Query: 334 CFLCYTPS---PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
++ + TP NG ITFG+ NN K + WA+IL VP SR +
Sbjct: 589 TWVTLGRQHLFTDVAIESSTPEDRNGVITFGTANNPLKYGADAIAAWAKILNRVPGSRFL 648
Query: 391 VKCKPFCCDSVRHRFLSTLEQLGLE-SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAG 449
+P + F + E+L E + D + I + +H+ Y+ +DI+LD FP+ G
Sbjct: 649 F-LRP---EGDVPAFRANAEKLFAEHGVTADRIAYIAIRGNHLPHYNQIDIALDPFPHTG 704
Query: 450 TTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTA 509
TTTCE+L+MGVP +T+ G+ + S L+ GL L D+Y++ A+ LA D
Sbjct: 705 GTTTCEALWMGVPTITLVGAAFFERISYSNLSNTGLADLCTFTVDDYIETAVTLAGDRAR 764
Query: 510 LANLRMSLRDLMSKSPVCDGQNF 532
+LR +LR ++ +P+ Q F
Sbjct: 765 RQDLRQTLRQRIADNPLGQAQRF 787
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y ++ + + A + A P E LG + D+AV ++MAL +
Sbjct: 152 NLGNVYFDLEEAEKAEAMFLKATQLQPKEGEYFRLLGRTRQQNGKSDQAVRDFRMALGLS 211
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +++++L T + + A +++ + P + L R G AI A
Sbjct: 212 PGNLKAVSDLIFTLTRLNRTEEAHTALDRYLRQFPNEPGLLLSRADLLRRTGKTEEAIAA 271
Query: 123 YEQCLKIDPD 132
Y L + P+
Sbjct: 272 YNHLLPLHPN 281
>gi|255590901|ref|XP_002535393.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223523255|gb|EEF26987.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 511
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 203/416 (48%), Gaps = 44/416 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG G AI Y A P AEA +NLG + + AV A+
Sbjct: 103 LNNLGNMRGRACNHQGAIAAYRAALSLAPDYAEAHSNLGHALRQAGDSLAAVGSCTRAVE 162
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN--------------- 105
+KP F+Q+ NLG G + A + KA+A NP A A+NN
Sbjct: 163 LKPEFAQAWINLGNALLDLGSDEDALDSYIKALALNPNDANAHNNVGNILEKYGRAARAA 222
Query: 106 -------------------LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146
LG + RD G + A +Y Q + +DP A N LL +N
Sbjct: 223 EAYRRALALEPERAPLHNNLGNVLRDQGLLDQATASYRQAVALDPGFAQAHSNLLLLLNT 282
Query: 147 INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEA 206
+ + F+ R +G+R + + + ++ L +G+VS D +H V +F+E+
Sbjct: 283 RPDVSLREQFDEARAFGERQSAKVLRVGHPPHASETKKRLRVGFVSGDLNSHPVGFFLES 342
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
L + D + ++V Y+ + DA + +++M W D+ +D++ A +R+D +D
Sbjct: 343 VLGHLDRERIELVAYATRQRDDAVS----QRLMPHFSAWHDVSRLDDETCARRIRDDAVD 398
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
ILV+L+GHT +N+L + A +PAPVQ TW+GY TTGL +IDY I D P + + VE
Sbjct: 399 ILVDLSGHTNHNRLPVFAWKPAPVQATWLGYFATTGLASIDYVIADRHVLPSDESSQFVE 458
Query: 327 ELIRLPECFLCYTPSP---EAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
LP +LC+TP P EAG + PA +G ITFG FN+L K+ V+ +W+R
Sbjct: 459 APWHLPHSYLCFTPPPFDIEAGLL---PAGAHGAITFGCFNHLVKLNDAVIALWSR 511
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LGV ++ I E + +P+ A NNLG + N A+ Y+ ALS
Sbjct: 70 LHFLGVLVCDVGNLPAGIDLIEKSIQLHPN-AIYLNNLGNMRGRACNHQGAIAAYRAALS 128
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P+++++ +NLG G AA +A+ P +A+A+ NLG D GS A+
Sbjct: 129 LAPDYAEAHSNLGHALRQAGDSLAAVGSCTRAVELKPEFAQAWINLGNALLDLGSDEDAL 188
Query: 121 DAYEQCLKIDPDSRNAGQN 139
D+Y + L ++P+ NA N
Sbjct: 189 DSYIKALALNPNDANAHNN 207
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+A ECY++ L + +L+ LGV+ G + A ++IEK+I +P A NNLG +
Sbjct: 51 EAAECYKLILQHDGAHADALHFLGVLVCDVGNLPAGIDLIEKSIQLHPN-AIYLNNLGNM 109
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A + AI AY L + PD A N
Sbjct: 110 RGRACNHQGAIAAYRAALSLAPDYAEAHSN 139
>gi|400754587|ref|YP_006562955.1| hypothetical protein PGA2_c17130 [Phaeobacter gallaeciensis 2.10]
gi|398653740|gb|AFO87710.1| hypothetical protein PGA2_c17130 [Phaeobacter gallaeciensis 2.10]
Length = 585
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 238/533 (44%), Gaps = 12/533 (2%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A F P A + + + A++ AL ++P + L+ +G + + K+
Sbjct: 52 ALVFEPENATLHAEIASSFMQEKKYELALKHLMGALKLEPTSPKWLSAIGTILFLMDKLG 111
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
A E +P A + L + S+ D + +D D N +
Sbjct: 112 DAVGFFEAVYQLDPENAMNVSRLIQSQMNLCDWSVYEDQKNKLRILDNDPSNG--DPFTT 169
Query: 144 MNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
+ Y+++G K + K + +D T +R + +GY S D+F H+ +
Sbjct: 170 LLYVDDGAFQKKRVVMKTRKKATISEQKVARKFDRTPVADRKIRVGYFSCDFFNHATMFL 229
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
+ H+ +++ +Y + D R++V++ +R I G+ ++ VA + R D
Sbjct: 230 MARHFELHNRDKFEIYIYDYSEEPDNV---MRQRVLRSADCYRQIQGVKDEDVAELARAD 286
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
+DI ++L G+T + + + + APVQ++++GYP TTG+PT+DY + D + P E ++
Sbjct: 287 GLDIAIDLKGYTKHARPAIFGFRAAPVQISYLGYPGTTGMPTMDYFLADPVTVPKEGRRH 346
Query: 324 HVEELIRLPECFLCYTPS---PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARI 380
E+++ +P C+ S PE P L + F SFNN K+TP +W +
Sbjct: 347 FSEKILYMPNCYQVNDNSRAHPEEKPTRADMGLPEDAVVFCSFNNHNKVTPAEFDIWMDL 406
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L V NS L D VR L E G+ + R+ + DH+ L DI
Sbjct: 407 LKDVDNSVLWFLA---AADIVRANILKEAEARGVPADRI-VFAGRCSTPDHVARLPLADI 462
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LDTF TT E L+ GVP VT G A V S++T VG LIA+ ++EY LA
Sbjct: 463 FLDTFACNAHTTASEMLWSGVPVVTKPGEQFAARVAASIVTAVGCPELIAETDEEYRALA 522
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L+LA+ LR L+ + +P+ D + + E+ RY G P
Sbjct: 523 LRLATQPEERQALREKLKANIPTTPLYDTEQYVRDFEALMEKAIQRYDDGLKP 575
>gi|393765846|ref|ZP_10354406.1| tetratricopeptide tpr 2 repeat protein [Methylobacterium sp. GXF4]
gi|392728738|gb|EIZ86043.1| tetratricopeptide tpr 2 repeat protein [Methylobacterium sp. GXF4]
Length = 618
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 264/584 (45%), Gaps = 61/584 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV + + A V E + +P A NNLGV Y+ L +AV C++ + ++K
Sbjct: 52 NLGVVLNTLGRPAEAAVALERSLELDPLSASTHNNLGVAYRALRRLPEAVACFEHSRALK 111
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ + ++NNLG+ Y +++ A +AIA +P A+A+ +L R AG + A+++
Sbjct: 112 HD-AGTVNNLGLAYLDLERVENATRCFREAIALDPASAQAHLHLAFALRKAGDLLGALES 170
Query: 123 YEQCLKIDPDSRNAGQNRLLAM---------NYINEGHDDKLFEAH-------------- 159
+ +DP G ++LAM ++ D K+
Sbjct: 171 LDAAANLDP-----GHGQVLAMRSHLRQILCDWRAFATDRKMLSLDVGPWRRRDPPSPFP 225
Query: 160 -----RDWGKRFMR-------LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAP 207
D G + R L Q + P R + + Y+SPD+ H V+ +
Sbjct: 226 VLALTDDPGVQLKRGRDYAAPLALQAARASGPRHPGR-IRLAYLSPDFRAHPVAALMVDV 284
Query: 208 LVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
L HD + +++V S R ++ + + D +G + + A +R DI
Sbjct: 285 LALHDRERFEIVALS---YGPDDGSHLRTRIAEAADQFVDAHGWSDAEAAGFLRAWPADI 341
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS-LADPPETKQKHVE 326
V+L G T ++ G++A +PA VQ ++G+P TG ID+ + D+ LA+ + + E
Sbjct: 342 AVDLAGFTTLSRPGILASRPARVQGNYLGFPGPTGADWIDFTVGDAFLANEGKLQGGFSE 401
Query: 327 ELIRLPECFLCYTPSP--EAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAV 384
+I P CF + P A P T L F SF+N KI P + +W R+L A+
Sbjct: 402 TIIVQPGCFQVNSRRPPRSALPARSTEGLPEAGFVFCSFSNSYKIVPTIFAIWMRLLQAM 461
Query: 385 PNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY----SLMDI 440
P S L + + R + G++ R L+ +AY L D+
Sbjct: 462 PGSVLWLLAD---NEPARGNLRREAGRHGVDPQR-----LVFAQRVSYEAYLARLPLADL 513
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LDTFP+ TT ++L+MG+P +T +G +A + SLLT +GL L+ + D Y + A
Sbjct: 514 FLDTFPFNAGTTASDALWMGLPLMTCSGRAYASRMAGSLLTALGLPELVTDSLDAYERQA 573
Query: 501 LQLASDVTALANLRMSLRDLMSKSP-VCDGQNFALGLESTYRNM 543
LQLA D L +R L +++ P V D F LE+ + +
Sbjct: 574 LQLARDPATLEQVRARLDEILRSGPAVFDPGIFTRRLEAAFEAL 617
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P A + LG + R + +A+ A P ++ NNLGVV G+ AA
Sbjct: 9 EPDHPGALHLLGTLLHQRGDSAEALPLLNKAAQTTPQDAEIHNNLGVVLNTLGRPAEAAV 68
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
+E+++ +P A +NNLGV YR + A+ +E + D AG L + Y+
Sbjct: 69 ALERSLELDPLSASTHNNLGVAYRALRRLPEAVACFEHSRALKHD---AGTVNNLGLAYL 125
Query: 148 N 148
+
Sbjct: 126 D 126
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 55 YQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
Y+ L +P+ +L+ LG + +G A ++ KA P AE +NNLGV+ G
Sbjct: 2 YRAFLLAEPDHPGALHLLGTLLHQRGDSAEALPLLNKAAQTTPQDAEIHNNLGVVLNTLG 61
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQN 139
+ A A E+ L++DP S + N
Sbjct: 62 RPAEAAVALERSLELDPLSASTHNN 86
>gi|23016713|ref|ZP_00056466.1| COG3914: Predicted O-linked N-acetylglucosamine transferase,
SPINDLY family [Magnetospirillum magnetotacticum MS-1]
Length = 602
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/538 (28%), Positives = 238/538 (44%), Gaps = 45/538 (8%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
NLG + + A+ CY+ A+ + +F N + ++ ++D
Sbjct: 85 GNLGTVLLGQGRTADAMACYRRAVELDDSFVDGWRN---IASLAARLDD----------- 130
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG----- 150
+ A AY+N+ L A +L E + D D+ + + A+ G
Sbjct: 131 HEGSALAYSNVVRLTGGADGGALGYLGLELAVLCDWDNLPVVKEAISALPSWRTGKSLPV 190
Query: 151 -------HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERP-LVIGYVSPDYFTHSVSY 202
HD E R + + S+ + RP L +GY+S D+ H+ +Y
Sbjct: 191 PPFTLLVHDFSPAELRRHADEAATFIESRVAPMVHQPKARRPRLRLGYLSEDFHDHATAY 250
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
+ L HD +++ YS D +R R + W ++ + E A +
Sbjct: 251 LLAEALESHDRSRFEIFAYS-YGPEDKGAVRTR--LRDACDHWVELAALSEADCAKRIAA 307
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
D IDILV+L GHT + ++A +PAP+QV W+G+P T G +DY I D P +
Sbjct: 308 DGIDILVDLKGHTGRARTSILAARPAPIQVAWLGFPGTFGGTCMDYIIADPYVIPAGAEN 367
Query: 323 KHVEELIRLPECFLCYTP--SPEAGPVCPTPALTNGF----ITFGSFNNLAKITPKVLQV 376
+ E+++RLP LCY P S A P G FNN K + L V
Sbjct: 368 DYAEQVVRLP---LCYQPNDSRRARAATREPKAKWGLPEDAFVIAVFNNSFKFNAETLAV 424
Query: 377 WARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
W +L A P++ L V+ P S+R + + +G+++ R+ P L +HM
Sbjct: 425 WVAVLQAQPDAVLWFVEFHPAATASLR----AMMGAVGIDASRLIFAPR-LPQAEHMLRL 479
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
S D+ LDT+P AG TT ++L+ GVP V AG A V SLL +GL LIA+++
Sbjct: 480 SAADLFLDTWPCAGHTTASDALWAGVPLVAWAGRTFASRVAGSLLHALGLDELIAESQGG 539
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
Y LA LA D AL +R L SP+ DG+ F LE MW ++ KG+ P
Sbjct: 540 YHALAQHLAKDREALEQVRQRLWAATQASPLFDGKAFTPPLERALDTMWAKWEKGEKP 597
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
+LD A Y+ L + P L+ G+V +G++ A +I AIAA P + NL
Sbjct: 28 DLDGAARQYKNLLKLSPLHPDGLHLSGLVAMQKGQLTEAERLIRGAIAATPKAPAFHGNL 87
Query: 107 GVLYRDAGSISLAIDAYEQCLKID 130
G + G + A+ Y + +++D
Sbjct: 88 GTVLLGQGRTADAMACYRRAVELD 111
>gi|344338856|ref|ZP_08769787.1| Tetratricopeptide TPR_1 repeat-containing protein [Thiocapsa marina
5811]
gi|343801438|gb|EGV19381.1| Tetratricopeptide TPR_1 repeat-containing protein [Thiocapsa marina
5811]
Length = 788
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 186/378 (49%), Gaps = 17/378 (4%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
R L IGY+S D H+ +Y + HD ++V YS + T R +++
Sbjct: 411 RRLRIGYLSSDLHEHATAYLTASVFEAHDRARFEVFAYSYGPDDQSAT---RRRLLDAFE 467
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
+ DI + + A +R+D+IDILV+L G+T + ++A +PAP+QV W+GYP T +
Sbjct: 468 HFVDIRELGHTQAATRIRDDEIDILVDLKGYTRGARTEILALRPAPIQVNWLGYPGTMAV 527
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT------NGF 357
+DY I D + PPE + E L LP+ Y P V TP GF
Sbjct: 528 SFMDYLIADPVVIPPEQASSYDEALAYLPDA---YAPVDPRRKVAETPGRAAAGLPEEGF 584
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ F FNN KITP+V + W R+L AVP S L + D+V E+ G++
Sbjct: 585 V-FCCFNNPRKITPEVFERWCRLLHAVPGSLLWLFA---SQDAVIDNLKQEAERRGIDPR 640
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ L P + +H+ +L D+ LDT PY TT ++L+MGVP +T G A V
Sbjct: 641 RLVLAPRVP-QQEHLARLALADLMLDTLPYNAHTTASDALWMGVPVLTCVGDTFASRVAA 699
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
SLL GL LI + D+Y AL+LA+ ALA +R L +P D FA LE
Sbjct: 700 SLLGAAGLPELITSSLDDYEAEALRLATHPMALAGVRQRLAIARKTAPYFDPAGFARHLE 759
Query: 538 STYRNMWHRYCKGDVPSL 555
+ Y M R G P +
Sbjct: 760 ALYVRMHERLAAGLGPQM 777
>gi|407771719|ref|ZP_11119070.1| hypothetical protein TH3_19512 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407285261|gb|EKF10766.1| hypothetical protein TH3_19512 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 687
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 232/500 (46%), Gaps = 10/500 (2%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A YQ ALSI P +L+ LG + QG A +++ A E + +
Sbjct: 194 AQNLYQRALSIDPRHVPALHGLGRALSAQGDYAKAIAILKTAKRLAKGRIEIDLEIADIE 253
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLY 170
G I+ AI ++ P + +A L A+ + + + + R W + M
Sbjct: 254 LRCGDIASAIAELTVLVEKHPANADAHTALLAAVARLPDIGGVEYLKQARQWARSHMPTM 313
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
+ + N+K ++ L IG++SP + H+ + + + ++ +YSA + D
Sbjct: 314 PE-PKFINSKQIDKRLRIGWLSPHFCEHASFALLSGVARHLNRNEVELFLYSATPRPDQT 372
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
T + +VM G WR++YG ++ +R+D+IDIL +LTG AN + + A + APV
Sbjct: 373 TRSW--QVMADG--WREVYGQSPLQIVERIRKDRIDILFDLTGPVANQPITVFAHRAAPV 428
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADP--PETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
Q + P TTG+ +DY + A P P + E + L Y + +A P+
Sbjct: 429 QASIA--PMTTGISQMDYILVHHRAIPAKPAENKLFCENVQHLGSGPFAYAGADDAAPLS 486
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
PA + +TFG F+ L+ I+ L +AR+L + SRLV++ + L
Sbjct: 487 LLPAAIDEVVTFGCFDRLSNISDASLNCFARVLNKIKGSRLVIQNDVLGDAFAKKTMLDR 546
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
L Q GL S RV+L+ + D Y+ +DI L FP + L+ G+P VTM G
Sbjct: 547 LRQAGLHSDRVNLIGTVS-PEDKPDLYARIDIGLAPFPMIDIARYFDMLWHGIPFVTMVG 605
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A G+ LL+ +GL L A+ + YV+ AL L D+ AL +R +RD M S
Sbjct: 606 ETPASRGGLCLLSDIGLDALAAETQKGYVEKALLLTQDINALTTIRAGMRDRMKNSKAMS 665
Query: 529 GQNFALGLESTYRNMWHRYC 548
Q A LE R+MW +C
Sbjct: 666 SQAAARELEEACRDMWKTWC 685
>gi|254475400|ref|ZP_05088786.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110kDa subunit, putative [Ruegeria sp. R11]
gi|214029643|gb|EEB70478.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110kDa subunit, putative [Ruegeria sp. R11]
Length = 581
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 240/512 (46%), Gaps = 20/512 (3%)
Query: 49 DKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
D A+ AL +P + L+ +G + + + + A E +P A + L
Sbjct: 77 DLALRHLMGALKREPTNPKWLSGIGTILMLMERYEDAVGFFEAVYQLDPENAMNVSRLVQ 136
Query: 109 LYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK--RF 166
L D + D + +D D N + + Y+ DD F+ R K +
Sbjct: 137 LQMDLCKWEVYEDQKNKLRILDNDPANG--DPFTTLLYV----DDPAFQKKRAVTKMKKQ 190
Query: 167 MRL--YSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAV 224
+RL + Q ++D T R + IGY S D+F H+ + H+ ++V +Y
Sbjct: 191 LRLADFKQRNAFDRTATAGRRIRIGYFSNDFFNHATMLLMAQHFELHNSDRFEVFIYD-- 248
Query: 225 VKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMA 284
++ T + ++V+K ++ ++ + ++ VA + R+D++DI ++L G+T + + A
Sbjct: 249 -YSNQPTNAYLQRVVKAADHYKPVHAMRDEDVAELARDDQLDIAIDLKGYTKGARPAIFA 307
Query: 285 CQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC---YTPS 341
+ APVQ++++GYP TTGLPT+DY + D++ P E ++ E++I +P+C+ P
Sbjct: 308 FRAAPVQISYLGYPGTTGLPTMDYFVADAVTVPKEGRRHFSEKIIYMPDCYQVNDNSRPR 367
Query: 342 PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
PE P L + F +FNN K++P +W +L V S L + +
Sbjct: 368 PEQTPTRADMGLPQDGVVFCAFNNHNKVSPAEFDIWMDLLKQVDGSVLWFLA---GAEPL 424
Query: 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
R E G+ + R+ + DH+ L DI LDTF TT E ++ GV
Sbjct: 425 RANIRKEAEARGVSAERI-VFADRCSTPDHIARLPLADIFLDTFACNAHTTASELMWSGV 483
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P VTM G A V S+++ V LIA++ DEY +AL+LA + + LA LR + +
Sbjct: 484 PVVTMPGQQFAARVAASIVSAVNCPELIAQSVDEYRDIALRLAQNPSELAALRAKITQNI 543
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
++P+ D + + E+ RY G P
Sbjct: 544 PQTPLYDSEGYMKNFEALLELAIERYDNGLKP 575
>gi|222622881|gb|EEE57013.1| hypothetical protein OsJ_06783 [Oryza sativa Japonica Group]
Length = 1004
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 159/606 (26%), Positives = 261/606 (43%), Gaps = 63/606 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A FY+ A + NNL VIYK + N A+ CY L
Sbjct: 387 LTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCYTEVLR 446
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + +L N G + G+++ A + +A PT AEA+ NL Y+D+G + AI
Sbjct: 447 VDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTMAEAHANLASAYKDSGHVETAI 506
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR--FMRLYSQYTSWD 177
+Y+Q L++ PD A N L + + + + + +F + ++ M + +
Sbjct: 507 VSYKQALRLRPDFPEATCNLLHTLQCVCDWENRNAMFRDVEEIIRKQIKMSVLPSVQPFH 566
Query: 178 NTKDPERPLVIGYVSPDYFTH--------SVSYFIEAPLV-------------------- 209
P P++ +S Y H + F+ P V
Sbjct: 567 AIAYPIDPMLALEISCKYAAHCSLIASRFGLPSFVHPPPVPVKAEGKHCRLRVGYVSSDF 626
Query: 210 --------------YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
HD N +V Y A+ + D +R+++ + + D+ +
Sbjct: 627 GNHPLSHLMGSVFGMHDRDNVEVFCY-ALSQNDG--TEWRQRIQSEAEHFVDVSAMTSDM 683
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ +DKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 684 IARIINQDKIQILINLNGYTKGARNEIFALQPAPIQVSYMGFPGTTGAAYIDYLVTDEFV 743
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNLA 367
P + E+L+ LP C+ + PVCP G F FN L
Sbjct: 744 SPTCYSHIYSEKLVHLPHCYFVNDYKQKNRDCLDPVCPHKRSDYGLPEDKFIFACFNQLY 803
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P++ W IL VPNS L + P ++ R + G+ ++ + + +
Sbjct: 804 KMDPEIFDTWCNILKRVPNSALWLLRFPAAGET---RVRAHAAARGVRPDQI-IFTDVAM 859
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-K 486
++H++ SL D+ LDT TT + L+ G+P +T+ A V SL GL +
Sbjct: 860 KNEHIRRSSLADLFLDTPLCNAHTTGTDILWAGLPMITLPLEKMATRVAGSLCLATGLGE 919
Query: 487 HLIAKNE--DEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
+I + EY A+ LA + L L L+++ P+ D + LE Y MW
Sbjct: 920 EMIVSRQVMKEYEDRAVDLALNPAKLQALTNKLKEVRMTCPLFDTARWVRNLERAYYKMW 979
Query: 545 HRYCKG 550
+ YC G
Sbjct: 980 NLYCSG 985
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +DM I E A +P+ AE N+ +K++ ++D A+ Y A+ ++P
Sbjct: 118 LGAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRP 177
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL YT +G+++ AA+ +A+A NP +A++NLG L + G I A + Y
Sbjct: 178 NFCDAWSNLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCY 237
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
+ L+IDP A N LA ++ G DK
Sbjct: 238 IEALRIDPQFAIAWSN--LAGLFMEAGDLDK 266
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 74/138 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + D+AI Y A +P EA NN+G KD + +A+ CY+ L+++
Sbjct: 321 NLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVKEAINCYRSCLALQ 380
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y + AAA + AI+ + NNL V+Y+ G+ + AI
Sbjct: 381 ANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC 440
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L++DP + +A NR
Sbjct: 441 YTEVLRVDPTAADALVNR 458
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E D A+++Y+ A P A+A N G +YK +A+ YQ A+ +
Sbjct: 253 NLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISYQRAVQAR 312
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NL +Y QG++D A +AI +P + EAYNN+G +DAG + AI+
Sbjct: 313 PDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVKEAINC 372
Query: 123 YEQCLKIDPDSRNAGQN 139
Y CL + + A N
Sbjct: 373 YRSCLALQANHPQALTN 389
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y A P+ +A +NL Y + L++A +C + AL+I
Sbjct: 151 NMANAWKEKGDVDLAIRYYLTAIQLRPNFCDAWSNLASAYTWKGRLNEAAQCCRQALAIN 210
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ +P +A A++NL L+ +AG + A+
Sbjct: 211 PRLVDAHSNLGNLMKAQGFIQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLY 270
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
Y++ +K+ P +A Y+N+G+
Sbjct: 271 YKEAVKLKPSFADA---------YLNQGN 290
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A +P A A +NL ++ + +LDKA+ Y+ A+ +KP+F+ + N G VY G
Sbjct: 237 YIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMG 296
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A ++A+ A P YA AY NL +Y + G + +AI Y Q + DP A N
Sbjct: 297 MSQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNN 355
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A A NP +A +NLG + K + + +A CY AL I
Sbjct: 185 NLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALRID 244
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G +D A ++A+ P++A+AY N G +Y+ G AI +
Sbjct: 245 PQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIIS 304
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y++ ++ PD A N LA Y +G D
Sbjct: 305 YQRAVQARPDYAMAYGN--LATIYYEQGQLD 333
>gi|170739041|ref|YP_001767696.1| hypothetical protein M446_0702 [Methylobacterium sp. 4-46]
gi|168193315|gb|ACA15262.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium sp. 4-46]
Length = 667
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 171/596 (28%), Positives = 268/596 (44%), Gaps = 64/596 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGVA + +F A + A P A A +NLG Y+ +A C+ AL+++
Sbjct: 77 NLGVALNHLGRFAEAARALDRAVSLVPDDAAAQSNLGAAYRGLHRFAEARGCFARALALR 136
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + +NLG+ G+ + AA +A +P +A+A+ +L G + A+ +
Sbjct: 137 PDAGVA-SNLGLALLDLGEGEEAAACFRRATELDPAFAQAHVHLASTLLALGRLPEALAS 195
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD--------WGK---------- 164
E +DP G L + D + F A R+ W
Sbjct: 196 IEAATALDPAH---GYAVALRAHLRQALCDWRGFAADREALSARAGPWRADEPPPPFTVL 252
Query: 165 ----------RFMRLYSQYTSWDNTKDPERP----LVIGYVSPDYFTHSVSYFIEAPLVY 210
R R ++ + + + P P + + Y+SPD+ H V+ + L
Sbjct: 253 ALTDDPEAQLRRARAHAGRFAAERLRAPPGPRGERVRVAYLSPDFRQHPVAVLMADVLAC 312
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
HD ++V S D +R R + + D+ G + +VAA++R ID+ V+
Sbjct: 313 HDRARFEVHAVS-FGPDDGSALRAR--IRDGAEHFLDVRGSADAEVAALLRARGIDVAVD 369
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
L G T +++ G++A +PA +QV ++GYP +TG IDY I D+ P + E ++R
Sbjct: 370 LAGFTTHSRPGILAPRPARIQVNYLGYPGSTGADWIDYAIGDAFVAPEALQGAFSEAIVR 429
Query: 331 LPECFLC---YTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
LP F P + P L + FG+F+ K+TP + W R+L AVP S
Sbjct: 430 LPGAFQANGARPAPPASPPRRAAHGLPAEGLVFGAFSASYKLTPDLFAAWMRLLRAVPGS 489
Query: 388 R--LVVKCKPFCCDSVRHRFLSTLEQLGLESLR--VDLLPLILLNHDHMQAY----SLMD 439
LV P T + L E+ R VD L+L + Y +D
Sbjct: 490 VLWLVADHAP------------TRDNLRREAGRHGVDPDRLVLAGRAPYETYLDRLRHID 537
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
+ LDTFPY TT ++L+MGVP +T+AG +A + SLLT +GL L+A + D Y +
Sbjct: 538 LFLDTFPYNAGTTASDALWMGVPLLTLAGRAYASRMAGSLLTALGLPDLVAASLDAYERQ 597
Query: 500 ALQLASDVTALANLRMSLRDLM-SKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
AL+LA D LA+LR L + D FA LE+ +R M R +G P+
Sbjct: 598 ALRLA-DPERLADLRGRLAARRHGAGRIFDAPAFARRLEAAFRQMVARADRGLRPA 652
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
NL +A Y+ L+ +PN +L+ LG + +G+ A +E+A A P AE +NNL
Sbjct: 19 NLAQAETLYRAFLTREPNHPVALHLLGTLLHARGRTGAGLPFLERAAALLPLDAEVHNNL 78
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
GV G + A A ++ + + PD A N
Sbjct: 79 GVALNHLGRFAEAARALDRAVSLVPDDAAAQSN 111
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P+ A + LG + R + + A ++ P ++ NNLGV G+ AA
Sbjct: 34 EPNHPVALHLLGTLLHARGRTGAGLPFLERAAALLPLDAEVHNNLGVALNHLGRFAEAAR 93
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
+++A++ P A A +NLG YR + A + + L + PD+ N LA+ +
Sbjct: 94 ALDRAVSLVPDDAAAQSNLGAAYRGLHRFAEARGCFARALALRPDA-GVASNLGLALLDL 152
Query: 148 NEGHD 152
EG +
Sbjct: 153 GEGEE 157
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
F E A P AE NNLGV +A A+S+ P+ + + +NLG Y
Sbjct: 60 FLERAAALLPLDAEVHNNLGVALNHLGRFAEAARALDRAVSLVPDDAAAQSNLGAAYRGL 119
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+ A +A+A P A +NLG+ D G A + + ++DP
Sbjct: 120 HRFAEARGCFARALALRPD-AGVASNLGLALLDLGEGEEAAACFRRATELDP 170
>gi|374291195|ref|YP_005038230.1| hypothetical protein AZOLI_0612 [Azospirillum lipoferum 4B]
gi|357423134|emb|CBS85979.1| conserved protein of unknown function; putative TPR domain
[Azospirillum lipoferum 4B]
Length = 877
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 174/594 (29%), Positives = 264/594 (44%), Gaps = 59/594 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E+ + A+ Y A P A NL ++ + D A+ + L+ +
Sbjct: 276 NLANALRELGRPQDAVAQYRAALDLQPDFPVAEINLALLLSSLRDADGALAVLRTLLARQ 335
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++ LG V + DAA ++ A+A +P +A+ +L + AG +L++DA
Sbjct: 336 PANGEAWRRLGGVLAEAVRPDAAVAVLRNAVALDPGEPDAHVDLAMAAAMAGWSTLSVDA 395
Query: 123 YEQCLKIDPDSRNA-----GQNRLLA------------MNYINEGHD-----DKLFEAHR 160
+ L++ P A Q RLL + + EG + D L A
Sbjct: 396 CRRVLRLVPGHAAALGQLVHQQRLLCDWRDLDALESLLLRRVREGAEGVSPFDVLSCAST 455
Query: 161 DWGKRFMRLYSQYTSWDNTKDPERP---------LVIGYVSPDYFTHSVSYFIEAPLVYH 211
++ T RP L IGY+S D+ H++ + + L H
Sbjct: 456 LADQQSAAARWAATKARGAVPVARPAASAALDGRLRIGYLSADFREHAMGHLMVDALETH 515
Query: 212 DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR--DIYGIDEKKVAAMVREDKIDILV 269
D + V YS + D +R R + GI R D+ + A + D IDILV
Sbjct: 516 DRSRFAVTAYSTGID-DGSALRQR----FEQGIERFVDLRRHTDADAARTIAADGIDILV 570
Query: 270 ELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELI 329
+LTG T ++ ++A +PAPVQV W+GYP T G +DY + D P + E ++
Sbjct: 571 DLTGFTTFSRTSILAARPAPVQVNWLGYPGTLGAGFVDYIVADPTVIAPGEEGFFTERVV 630
Query: 330 RLPECFLCYTPS------PEAGPV---CPTPALTNGFITFGSFNNLAKITPKVLQVWARI 380
RLP+C Y P+ EA P+ C PA +GF+ F FN+ K+TP + WARI
Sbjct: 631 RLPDC---YQPNDRRRAIAEATPMRAECGLPA--DGFV-FCCFNSAYKLTPALFDGWARI 684
Query: 381 LCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMD 439
L AVP S L + P ++R E G++ R+ + L + +H+ + L D
Sbjct: 685 LAAVPGSVLWLYAGNPQVAANLRR----EAEARGVDPRRL-VFAKPLPHAEHLARHRLAD 739
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
+ LDT PY TT ++L+ G+P +T G+ A V SLL GL LI +++ Y
Sbjct: 740 LFLDTLPYNAHTTASDALWAGLPVLTRCGTTFAGRVAASLLRAAGLPELIVDDQEAYEAA 799
Query: 500 ALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A LA L +LR L P+ D F LE+ YR MW + G P
Sbjct: 800 AAALARSPDRLRDLRQRLARNRPVCPLFDTPRFTRHLEAAYRAMWESHRVGGAP 853
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 48/113 (42%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A P A NNL ++ AV Y+ AL ++P+F + NL ++ + D
Sbjct: 263 AVLLEPSDPAARNNLANALRELGRPQDAVAQYRAALDLQPDFPVAEINLALLLSSLRDAD 322
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
A ++ +A P EA+ LG + +A A+ + +DP +A
Sbjct: 323 GALAVLRTLLARQPANGEAWRRLGGVLAEAVRPDAAVAVLRNAVALDPGEPDA 375
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 55/132 (41%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y L +A + A Y + H E NNLGV +D + +A ++ A +
Sbjct: 105 YGLALALHRQGRPQDAEPHYRNVLATHSHLGEVHNNLGVALQDLGRVAEAAAAHREAARL 164
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+ + + + LGV G+ A KAI P A+ ++NL L AG + A+
Sbjct: 165 DPSDATAWSKLGVALHRMGRGAEAEAAFRKAIGFAPQDADNWHNLAGLLDAAGRPAEALA 224
Query: 122 AYEQCLKIDPDS 133
+ + P S
Sbjct: 225 PGRLAVALAPAS 236
>gi|224123642|ref|XP_002319130.1| predicted protein [Populus trichocarpa]
gi|222857506|gb|EEE95053.1| predicted protein [Populus trichocarpa]
Length = 923
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 164/605 (27%), Positives = 253/605 (41%), Gaps = 61/605 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y E A Y+ + +NL VIYK + N A+ CY L I+
Sbjct: 313 NLGNIYMEWNMSAAAASCYKATLAVTTGLSAPFSNLAVIYKQQGNYSDAISCYNEVLRIE 372
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + L N G Y G++ A + AI P AEA+ NL Y+D+G + AI +
Sbjct: 373 PLAADGLVNRGNTYKEIGRVSEAIQDYINAITIRPNMAEAHANLASAYKDSGHVEAAIKS 432
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR---------------- 165
Y + L + D A N L + + D DK+F +R
Sbjct: 433 YRKALLLRTDFPEATCNLLHTLQCVCCWEDRDKMFNEVEGIIRRQISMAVLPSVQPFHAI 492
Query: 166 -----------FMRLYSQYTSWDNTKDPERP-----------------LVIGYVSPDYFT 197
R Y+ + S ++ P L IGYVS D+
Sbjct: 493 AYPIDPVLALEISRKYAAHCSIIASRFALPPFKHPAPLAVKHERGSGRLRIGYVSSDFGN 552
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
H +S+ + + H+ +N +V Y A+ D R R + + I D+ + +A
Sbjct: 553 HPLSHLMGSVFGMHNRENVEVFCY-ALSPNDGTEWRQRTQFEAEHFI--DVSAMTSDMIA 609
Query: 258 AMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
++ EDKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD P
Sbjct: 610 KLINEDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSP 669
Query: 318 PETKQKHVEELIRLPECFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNLAKI 369
+ E+L+ LP C+ + P C G F FN L K+
Sbjct: 670 TRFSHIYSEKLVHLPHCYFVNDYKQKNLDVLDPTCQHKRSDYGLPEDKFIFACFNQLYKM 729
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429
P++ W IL VPNS L + P +R R + + + + + + + +
Sbjct: 730 DPEIFNTWCNILKRVPNSALWLLRFP-AAGEMRLRAYAVAQGVQPDQI---IFTDVAMKQ 785
Query: 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-KHL 488
+H++ +L D+ LDT TT + L+ G+P VTM A V SL GL +
Sbjct: 786 EHIRRSALADLFLDTPLCNAHTTGTDILWAGLPMVTMPLEKMATRVAGSLCLATGLGDEM 845
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
I + EY + A+ LA + L +L L+ P+ D + + L+ Y MW +C
Sbjct: 846 IVSSMKEYEERAVSLALNRPKLQSLTNRLKAARMTCPLFDTRRWVRNLDRAYFKMWSIHC 905
Query: 549 KGDVP 553
G P
Sbjct: 906 SGQQP 910
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + D+AI+ Y+ A + EA NNLG KD +D+A++CY LS++
Sbjct: 245 NLASTYYERGQLDLAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQ 304
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN Q+L NLG +Y AAA + +A + ++NL V+Y+ G+ S AI
Sbjct: 305 PNHPQALTNLGNIYMEWNMSAAAASCYKATLAVTTGLSAPFSNLAVIYKQQGNYSDAISC 364
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+I+P + + NR
Sbjct: 365 YNEVLRIEPLAADGLVNR 382
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E + A+ +Y+ A P +A NLG +YK +A+ CYQ A+ +
Sbjct: 177 NLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIVCYQQAVQAR 236
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P ++ + NL Y +G++D A ++AIA + + EAYNNLG +D G + AI
Sbjct: 237 PKYAMAFGNLASTYYERGQLDLAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEAIQC 296
Query: 123 YEQCLKIDPDSRNAGQN 139
Y QCL + P+ A N
Sbjct: 297 YNQCLSLQPNHPQALTN 313
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 84/158 (53%), Gaps = 2/158 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +DM I E A P AE N+ +K++ ++D A+ Y +++ ++P
Sbjct: 42 LGAIYYQLQDYDMCIAKNEEALRLEPRFAECYGNMANAWKEKGDIDLAIRYYLVSIELRP 101
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF+ + +NL Y +G+++ A++ +A+ NP +A++NLG L + G + A Y
Sbjct: 102 NFADAWSNLASAYMRKGRLNEASQCCRQALTLNPHLVDAHSNLGNLMKAQGLVQEAYSCY 161
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
+ L+I P A N LA ++ G ++ + +++
Sbjct: 162 LEALRIQPTFAIAWSN--LAGLFMESGDLNRALQYYKE 197
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 74/129 (57%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y ++ P+ A+A +NL Y + L++A +C + AL++
Sbjct: 75 NMANAWKEKGDIDLAIRYYLVSIELRPNFADAWSNLASAYMRKGRLNEASQCCRQALTLN 134
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + +NLG + QG + A +A+ PT+A A++NL L+ ++G ++ A+
Sbjct: 135 PHLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQY 194
Query: 123 YEQCLKIDP 131
Y++ +K+ P
Sbjct: 195 YKEAVKLKP 203
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A A NPH +A +NLG + K + + +A CY AL I+
Sbjct: 109 NLASAYMRKGRLNEASQCCRQALTLNPHLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQ 168
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G ++ A + ++A+ P + +AY NLG +Y+ G AI
Sbjct: 169 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIVC 228
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y+Q ++ P A N LA Y G D
Sbjct: 229 YQQAVQARPKYAMAFGN--LASTYYERGQLD 257
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A A +NL ++ + +L++A++ Y+ A+ +KP F + NLG VY G
Sbjct: 161 YLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALG 220
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
A ++A+ A P YA A+ NL Y + G + LAI Y+Q + D
Sbjct: 221 MPQEAIVCYQQAVQARPKYAMAFGNLASTYYERGQLDLAILHYKQAIACD 270
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y + AIV Y+ A P A A NL Y +R LD A+ Y+ A++
Sbjct: 211 NLGNVYKALGMPQEAIVCYQQAVQARPKYAMAFGNLASTYYERGQLDLAILHYKQAIACD 270
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
F ++ NNLG G++D A + + ++ P + +A NLG +Y + + A
Sbjct: 271 QRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPNHPQALTNLGNIYMEWNMSAAAASC 330
Query: 123 YEQCLKI 129
Y+ L +
Sbjct: 331 YKATLAV 337
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
N +A+E + P + +L LG +Y D E+A+ P +AE Y N+
Sbjct: 17 NYKQALEHSSVVYERSPQRTDNLLLLGAIYYQLQDYDMCIAKNEEALRLEPRFAECYGNM 76
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+++ G I LAI Y +++ P+ +A N LA Y+ +G
Sbjct: 77 ANAWKEKGDIDLAIRYYLVSIELRPNFADAWSN--LASAYMRKG 118
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G Y E+ + AI Y A P+ AEA NL YKD +++ A++ Y+ AL
Sbjct: 379 LVNRGNTYKEIGRVSEAIQDYINAITIRPNMAEAHANLASAYKDSGHVEAAIKSYRKALL 438
Query: 61 IKPNFSQSLNNLGVVYTVQ 79
++ +F ++ NL ++T+Q
Sbjct: 439 LRTDFPEATCNL--LHTLQ 455
>gi|168054571|ref|XP_001779704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668902|gb|EDQ55500.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 156/607 (25%), Positives = 258/607 (42%), Gaps = 65/607 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y E A FY+ + +NL IYK + N A+ CY + +
Sbjct: 309 NLGNIYMEWNMISTAATFYKATLSVTTGLSAPYSNLATIYKQQGNYADAIACYNEVMRVD 368
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + L N G G++ A + +A+A PT AEA+ NL Y+D+G + AI +
Sbjct: 369 PMAADGLVNRGNTLKEIGRVSEAIQDYIRAVAIRPTMAEAHANLASAYKDSGHVEAAIKS 428
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLF------------------------- 156
Y+Q L + D A N L + + + D DK F
Sbjct: 429 YKQALFLRADFPEATCNLLHTLQCVCDWEDRDKKFTEIEAVVRRQIKMRLLPSVQPFHAI 488
Query: 157 ----------EAHRDWGKRFMRLYSQYTSWDNTKDPERP---------LVIGYVSPDYFT 197
E R + + + S+Y + P L IGYVS D+
Sbjct: 489 AYPIDPMLALEISRKYAEHCSLIASRYGVQSFSHPVAIPVKSGGGSGRLRIGYVSSDFGN 548
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
H +S+ + + H+ ++ +V Y A+ +D +R+++ + + D+ + +A
Sbjct: 549 HPLSHLMGSVFGMHNREHVEVFCY-ALSPSDGS--EWRQRISVEAEHFTDVSAMASDAIA 605
Query: 258 AMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
++ ++I IL+ L G+T + + A +PAP+QV+++G+P TTG IDY +TD L P
Sbjct: 606 QLIDNNQIQILINLNGYTKGARNEIFAMRPAPIQVSYMGFPGTTGADYIDYLVTDELVSP 665
Query: 318 PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP--------ALTNGFITFGSFNNLAKI 369
E + E+++ LP C+ V L F FN L K+
Sbjct: 666 LEYAHIYSEKIVHLPHCYFVNDYKQRNRDVLDPSIHMKRSDYGLPEDKFLFACFNQLYKM 725
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD--LLPLILL 427
P++ W RIL VPNS L + P ++ F + +R D + +
Sbjct: 726 DPEIFSTWCRILKRVPNSALWLLRFPAAGETRLKAFAIA------QGVRPDQIIFTDVAA 779
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-K 486
++H++ L D+ LD+ TT + L+ G+P VT+ A V +SL G +
Sbjct: 780 KNEHIRRSGLADLFLDSPLCNAHTTGTDVLWAGLPMVTLPLEKMATRVAMSLCYAAGFGE 839
Query: 487 HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
++ + EY + A+ LA+ L L +LR SP+ D + E ++ MW+
Sbjct: 840 EMVVSSMQEYEERAVMLATTPAILKTLTANLRASRLSSPLFDTIRWVRNFERSFFKMWNL 899
Query: 547 YCKGDVP 553
YC G P
Sbjct: 900 YCSGAHP 906
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 68/128 (53%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ FDM I E A P AE N+ K++ N+D A++ Y +A+ +KP
Sbjct: 38 LGAIYYQLHDFDMCIAKNEEAIRIEPQFAECYGNMANALKEKGNIDLAIQYYSVAIELKP 97
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL Y +G++ AAE + A+ NP +A++NLG L + G A Y
Sbjct: 98 NFCDAWSNLASAYMRKGRLQEAAECCQHALTLNPRLVDAHSNLGNLLKAQGLTHHAYLCY 157
Query: 124 EQCLKIDP 131
+ +++ P
Sbjct: 158 VEAIRLQP 165
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Query: 9 GEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQS 68
GE+ K A+ +Y+ A P+ A+A NLG + K +A+ CY ++ ++P+++ +
Sbjct: 182 GELQK---ALAYYKEAIRLKPNFADAHLNLGNVLKAIGRHQEAISCYNRSIQLRPDYAIA 238
Query: 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128
NL VY QG +D A ++A+ + ++ EAYNNLG +DAG + +I YE CL+
Sbjct: 239 YGNLASVYYEQGLLDYAILYYKQALLLDSSFIEAYNNLGNALKDAGRVEESISCYENCLQ 298
Query: 129 IDPDSRNAGQN 139
+ + A N
Sbjct: 299 LQNNHPQALTN 309
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D AI++Y+ A + EA NNLG KD +++++ CY+ L ++
Sbjct: 241 NLASVYYEQGLLDYAILYYKQALLLDSSFIEAYNNLGNALKDAGRVEESISCYENCLQLQ 300
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y + AA + ++ + Y+NL +Y+ G+ + AI
Sbjct: 301 NNHPQALTNLGNIYMEWNMISTAATFYKATLSVTTGLSAPYSNLATIYKQQGNYADAIAC 360
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + +++DP + + NR
Sbjct: 361 YNEVMRVDPMAADGLVNR 378
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A E D+AI +Y +A P+ +A +NL Y + L +A EC Q AL++
Sbjct: 71 NMANALKEKGNIDLAIQYYSVAIELKPNFCDAWSNLASAYMRKGRLQEAAECCQHALTLN 130
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG A +AI PT+A A++NL L +AG + A+
Sbjct: 131 PRLVDAHSNLGNLLKAQGLTHHAYLCYVEAIRLQPTFAIAWSNLAGLLMEAGELQKALAY 190
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ +++ P+ +A N
Sbjct: 191 YKEAIRLKPNFADAHLN 207
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A + Y A P A A +NL + + L KA+ Y+ A+ +KPNF+ + NLG V
Sbjct: 153 AYLCYVEAIRLQPTFAIAWSNLAGLLMEAGELQKALAYYKEAIRLKPNFADAHLNLGNVL 212
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
G+ A ++I P YA AY NL +Y + G + AI Y+Q L +D
Sbjct: 213 KAIGRHQEAISCYNRSIQLRPDYAIAYGNLASVYYEQGLLDYAILYYKQALLLD 266
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + A + A NP +A +NLG + K + A CY A+ ++
Sbjct: 105 NLASAYMRKGRLQEAAECCQHALTLNPRLVDAHSNLGNLLKAQGLTHHAYLCYVEAIRLQ 164
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL + G++ A ++AI P +A+A+ NLG + + G AI
Sbjct: 165 PTFAIAWSNLAGLLMEAGELQKALAYYKEAIRLKPNFADAHLNLGNVLKAIGRHQEAISC 224
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEG 150
Y + +++ PD A N LA Y +G
Sbjct: 225 YNRSIQLRPDYAIAYGN--LASVYYEQG 250
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + AI Y + P A A NL +Y ++ LD A+ Y+ AL +
Sbjct: 207 NLGNVLKAIGRHQEAISCYNRSIQLRPDYAIAYGNLASVYYEQGLLDYAILYYKQALLLD 266
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+F ++ NNLG G+++ + E + + +A NLG +Y + IS A
Sbjct: 267 SSFIEAYNNLGNALKDAGRVEESISCYENCLQLQNNHPQALTNLGNIYMEWNMISTAATF 326
Query: 123 YEQCLKI 129
Y+ L +
Sbjct: 327 YKATLSV 333
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
NP +A LG IY + D + + A+ I+P F++ N+ +G +D A +
Sbjct: 28 NPQRTDALLLLGAIYYQLHDFDMCIAKNEEAIRIEPQFAECYGNMANALKEKGNIDLAIQ 87
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
AI P + +A++NL Y G + A + + L ++P +A N
Sbjct: 88 YYSVAIELKPNFCDAWSNLASAYMRKGRLQEAAECCQHALTLNPRLVDAHSN 139
>gi|148555054|ref|YP_001262636.1| hypothetical protein Swit_2139 [Sphingomonas wittichii RW1]
gi|148500244|gb|ABQ68498.1| TPR repeat-containing protein [Sphingomonas wittichii RW1]
Length = 654
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 159/591 (26%), Positives = 258/591 (43%), Gaps = 51/591 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + ++ + D AI YE A + A+A NLG + D +A+ ++ A++++
Sbjct: 70 NLGNSLRDLGRRDAAIRSYERAIAIDSGLAQAHFNLGTVLYDLGRSAEALSRFEAAIALR 129
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + G + + A +A+ P A +NN+G+ R G AI A
Sbjct: 130 PDYAAAHAQRGDALVALSRAEEALGCYRRALDLAPDMARTHNNMGMALRLLGRHPEAIAA 189
Query: 123 YEQCLKIDP-------------------DSRNAGQNRLLAMN--------YINEGHDDK- 154
+ + L P D+ RL A+ ++ DD
Sbjct: 190 FGEALARQPGHDAARIRRAYLRARICDWDAMAEDAARLPALGIEGPPVPPFMMLALDDSP 249
Query: 155 ---LFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYH 211
A R F R T P L IGY S D+ H+ + + H
Sbjct: 250 ARHRLRADRHAAANFPRAAGVETVPARPVAPGERLRIGYFSADFHDHATMHLMARLFELH 309
Query: 212 DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVEL 271
D ++V +S +D R +++ + D+ +D++ +AA+ R ID+ V+L
Sbjct: 310 DRAGFEVHAFSYGPASDDP---MRRRLLAAVEHFHDVRTLDDQAIAALARRAGIDVAVDL 366
Query: 272 TGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRL 331
G+TA+ + G+ A + APVQ+ ++GYP T G P IDY + D PP+ + E I L
Sbjct: 367 KGYTADTRSGLFAGRAAPVQIAYLGYPGTMGAPFIDYVVADRTVIPPDHLAHYSEAPIWL 426
Query: 332 PECFLCYTPSPEAGPVCPTPALT-------NGFITFGSFNNLAKITPKVLQVWARILCAV 384
P Y + + P+ P GF+ F SFN KITP + +W R+L V
Sbjct: 427 PH---SYQATDDRRPIADRPPRRADVGLPEQGFV-FASFNASYKITPDLFAIWMRLLDRV 482
Query: 385 PNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLD 443
S L ++ ++R + G++ R+ L L +H+ L D+ LD
Sbjct: 483 EGSVLWLLGDDADAAANLR----GHARRHGIDPARL-LFAAKLPVAEHLARQKLADLFLD 537
Query: 444 TFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
+F TT ++L+ G+P VT G+ A V SLL VGL L+ + +Y +LA L
Sbjct: 538 SFVCNAHTTASDALWAGLPIVTRIGAGFAARVCASLLRAVGLPELVTDSAADYERLAFAL 597
Query: 504 ASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
A+D AL +R L + +P+ D FA +E+ YR R G P+
Sbjct: 598 ATDRAALDAIRARLATQRATAPLFDSTAFARHIEAGYRAAHARRLAGLPPA 648
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 58/146 (39%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+A+ + + A + P A NLG +D D A+ Y+ A++I
Sbjct: 37 LGIAHARLREPAAAAALFARVTTVEPDNAAGHVNLGNSLRDLGRRDAAIRSYERAIAIDS 96
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+Q+ NLG V G+ A E AIA P YA A+ G A+ Y
Sbjct: 97 GLAQAHFNLGTVLYDLGRSAEALSRFEAAIALRPDYAAAHAQRGDALVALSRAEEALGCY 156
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINE 149
+ L + PD N +A+ +
Sbjct: 157 RRALDLAPDMARTHNNMGMALRLLGR 182
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P LG+ + A + +++P+ + NLG G+ DAA
Sbjct: 28 PQAVPLLQMLGIAHARLREPAAAAALFARVTTVEPDNAAGHVNLGNSLRDLGRRDAAIRS 87
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR---LLAMN 145
E+AIA + A+A+ NLG + D G + A+ +E + + PD A R L+A++
Sbjct: 88 YERAIAIDSGLAQAHFNLGTVLYDLGRSAEALSRFEAAIALRPDYAAAHAQRGDALVALS 147
Query: 146 YINEG 150
E
Sbjct: 148 RAEEA 152
>gi|168044085|ref|XP_001774513.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674225|gb|EDQ60737.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 932
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 259/605 (42%), Gaps = 61/605 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y E A FY+ + + +NL IYK + N A+ CY + +
Sbjct: 319 NLGNIYMECNMVSTAATFYKATLNVTTGLSAPYSNLATIYKQQGNYADAIACYNEVMRVD 378
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + L N G G++ A + +A+A PT AEA+ NL Y+D+G + AI +
Sbjct: 379 PMAADGLVNRGNTLKEIGRVSEAIQDYIRAVAIRPTMAEAHANLASAYKDSGHVEAAIKS 438
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLF------------------------- 156
Y+Q L + PD N L + + + D DK F
Sbjct: 439 YKQALFLRPDFPEVTCNLLHTLQCVCDWDDRDKKFTEVEAVIRRQIKMRLLPSVQPFHAI 498
Query: 157 ----------EAHRDWGKRFMRLYSQYTSWDNTKDPERP---------LVIGYVSPDYFT 197
E R + + + ++Y T P L +GYVS D+
Sbjct: 499 AYPIDPILALEISRKYAEHCSLIATRYGVQSFTPPIAIPVKNEGGSGRLRVGYVSSDFGN 558
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
H +S+ + + H+ + +V Y A+ +D +R+++ + + D+ + +A
Sbjct: 559 HPLSHLMGSIFGMHNRNHVEVFCY-ALSPSDGS--EWRQRISAEAEHFIDVSAMASDAIA 615
Query: 258 AMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
++ +KI ILV L G+T + + A +PAP+QV+++G+P TTG IDY +TD L P
Sbjct: 616 ELINNNKIQILVNLNGYTKGARNEIFAMRPAPIQVSYMGFPGTTGADYIDYLVTDELVSP 675
Query: 318 PETKQKHVEELIRLPECFLCY--------TPSPEAGPVCPTPALTNGFITFGSFNNLAKI 369
E + E+++ LP C+ P +L F FN L K+
Sbjct: 676 HEYAHIYSEKIVHLPHCYFVNDYKQRNRDVLDPSISMKRSDYSLPEDKFLFACFNQLYKM 735
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429
P++ W RIL VPNS L + P R + + + + E + + +
Sbjct: 736 DPEIFSTWCRILKRVPNSALWLLRFP-AAGETRLKAFAIAQGVRPEQF---IFTDVAAKN 791
Query: 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-KHL 488
+H++ +L D+ LD+ TT + L+ G+P VT+ A V +SL G + +
Sbjct: 792 EHIRRSALADLFLDSPLCNAHTTGTDVLWAGLPMVTLPLEKMATRVAMSLCYAAGFGEEM 851
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+ + EY + A+ LA++ L L +LR SP+ D + E ++ MW+ C
Sbjct: 852 VVSSMQEYEERAVMLATNPAILKALTANLRASRLSSPLFDTIRWVRNFERSFFKMWNLNC 911
Query: 549 KGDVP 553
G P
Sbjct: 912 SGAHP 916
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 9 GEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQS 68
GE+ K A+ +Y+ A P +A NLG + K + +A+ CY ++ ++P+++ +
Sbjct: 192 GELQK---ALTYYKEAIRLKPSFVDAHLNLGNVLKAMNRHQEAIACYNRSIQLRPDYAIA 248
Query: 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128
NL VY QG +D A ++A+ + ++ EAYNNLG +DAG + AI YE+CL+
Sbjct: 249 YGNLASVYYEQGLLDHAIVHYKQALLFDSSFIEAYNNLGNALKDAGQVDGAISCYEKCLQ 308
Query: 129 I 129
+
Sbjct: 309 L 309
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D AIV Y+ A F+ EA NNLG KD +D A+ CY+ L ++
Sbjct: 251 NLASVYYEQGLLDHAIVHYKQALLFDSSFIEAYNNLGNALKDAGQVDGAISCYEKCLQLQ 310
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ Q+L NLG +Y + AA + + + Y+NL +Y+ G+ + AI
Sbjct: 311 DSHPQALTNLGNIYMECNMVSTAATFYKATLNVTTGLSAPYSNLATIYKQQGNYADAIAC 370
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + +++DP + + NR
Sbjct: 371 YNEVMRVDPMAADGLVNR 388
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ FDM +V E A P AE N+ K++ ++D A+ Y A+ +KP
Sbjct: 48 LGAIYYQLHDFDMCLVKNEEAIRIEPKFAECYGNMANALKEKGDIDLAILYYSAAIELKP 107
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL + +G++ AAE + A+ NP +A++NLG L + G A Y
Sbjct: 108 NFCDAWSNLASAFMRKGRLQEAAECCQHALILNPRLVDAHSNLGNLLKAQGLTHHAYLCY 167
Query: 124 EQCLKIDP 131
+ +++ P
Sbjct: 168 VEAIRLQP 175
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A E D+AI++Y A P+ +A +NL + + L +A EC Q AL +
Sbjct: 81 NMANALKEKGDIDLAILYYSAAIELKPNFCDAWSNLASAFMRKGRLQEAAECCQHALILN 140
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG A +AI PT+A A++NL L +AG + A+
Sbjct: 141 PRLVDAHSNLGNLLKAQGLTHHAYLCYVEAIRLQPTFAIAWSNLAGLLMEAGELQKALTY 200
Query: 123 YEQCLKIDPDSRNAG---QNRLLAMNYINEG 150
Y++ +++ P +A N L AMN E
Sbjct: 201 YKEAIRLKPSFVDAHLNLGNVLKAMNRHQEA 231
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG M + AI Y + P A A NL +Y ++ LD A+ Y+ AL
Sbjct: 217 NLGNVLKAMNRHQEAIACYNRSIQLRPDYAIAYGNLASVYYEQGLLDHAIVHYKQALLFD 276
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+F ++ NNLG G++D A EK + ++ +A NLG +Y + +S A
Sbjct: 277 SSFIEAYNNLGNALKDAGQVDGAISCYEKCLQLQDSHPQALTNLGNIYMECNMVSTAATF 336
Query: 123 YEQCLKI 129
Y+ L +
Sbjct: 337 YKATLNV 343
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A + Y A P A A +NL + + L KA+ Y+ A+ +KP+F + NLG V
Sbjct: 163 AYLCYVEAIRLQPTFAIAWSNLAGLLMEAGELQKALTYYKEAIRLKPSFVDAHLNLGNVL 222
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
+ A ++I P YA AY NL +Y + G + AI Y+Q L D
Sbjct: 223 KAMNRHQEAIACYNRSIQLRPDYAIAYGNLASVYYEQGLLDHAIVHYKQALLFD 276
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A+ + A + A NP +A +NLG + K + A CY A+ ++
Sbjct: 115 NLASAFMRKGRLQEAAECCQHALILNPRLVDAHSNLGNLLKAQGLTHHAYLCYVEAIRLQ 174
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL + G++ A ++AI P++ +A+ NLG + + AI
Sbjct: 175 PTFAIAWSNLAGLLMEAGELQKALTYYKEAIRLKPSFVDAHLNLGNVLKAMNRHQEAIAC 234
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEG 150
Y + +++ PD A N LA Y +G
Sbjct: 235 YNRSIQLRPDYAIAYGN--LASVYYEQG 260
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%)
Query: 23 LAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKM 82
+ ++ +P +A LG IY + D + + A+ I+P F++ N+ +G +
Sbjct: 33 MVYNKSPQRTDALLLLGAIYYQLHDFDMCLVKNEEAIRIEPKFAECYGNMANALKEKGDI 92
Query: 83 DAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
D A AI P + +A++NL + G + A + + L ++P +A N
Sbjct: 93 DLAILYYSAAIELKPNFCDAWSNLASAFMRKGRLQEAAECCQHALILNPRLVDAHSN 149
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
N A++ M + P + +L LG +Y D E+AI P +AE Y N+
Sbjct: 23 NYKYALQNCLMVYNKSPQRTDALLLLGAIYYQLHDFDMCLVKNEEAIRIEPKFAECYGNM 82
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
++ G I LAI Y +++ P+ +A N LA ++ +G
Sbjct: 83 ANALKEKGDIDLAILYYSAAIELKPNFCDAWSN--LASAFMRKG 124
>gi|218190772|gb|EEC73199.1| hypothetical protein OsI_07263 [Oryza sativa Indica Group]
Length = 1004
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 158/606 (26%), Positives = 260/606 (42%), Gaps = 63/606 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A FY+ A + NNL VIYK + N A+ CY L
Sbjct: 387 LTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCYTEVLR 446
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + +L N G + G+++ A + +A PT AEA+ NL Y+D+G + AI
Sbjct: 447 VDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTMAEAHANLASAYKDSGHVETAI 506
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR--FMRLYSQYTSWD 177
+Y+Q L++ PD A N L + + + + + +F + ++ M + +
Sbjct: 507 VSYKQALRLRPDFPEATCNLLHTLQCVCDWENRNAMFRDVEEIIRKQIKMSVLPSVQPFH 566
Query: 178 NTKDPERPLVIGYVSPDYFTH--------SVSYFIEAPLV-------------------- 209
P P++ +S Y H + F+ P V
Sbjct: 567 AIAYPIDPMLALEISCKYAAHCSLIASRFGLPSFVHPPPVPVKAEGKHCRLRVGYVSSDF 626
Query: 210 --------------YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
HD N +V Y A+ + D +R+++ + + D+ +
Sbjct: 627 GNHPLSHLMGSVFGMHDRDNVEVFCY-ALSQNDG--TEWRQRIQSEAEHFVDVSAMTSDM 683
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+ ++ +DKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 684 IVRIINQDKIQILINLNGYTKGARNEIFALQPAPIQVSYMGFPGTTGAAYIDYLVTDEFV 743
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNLA 367
P + E+L+ LP C+ + PVCP G F FN L
Sbjct: 744 SPTCYSHIYSEKLVHLPHCYFVNDYKQKNRDCLDPVCPHKRSDYGLPEDKFIFACFNQLY 803
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P++ W IL VPNS L + P ++ R + G+ ++ + + +
Sbjct: 804 KMDPEIFDTWCNILKRVPNSALWLLRFPAAGET---RVRAHAAARGVRPDQI-IFTDVAM 859
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-K 486
++H++ SL D+ LDT TT + L+ G+P +T+ A V SL GL +
Sbjct: 860 KNEHIRRSSLADLFLDTPLCNAHTTGTDILWAGLPMITLPLEKMATRVAGSLCLATGLGE 919
Query: 487 HLIAKNE--DEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
+I + EY A+ LA + L L L+++ P+ D + LE Y MW
Sbjct: 920 EMIVSRQVMKEYEDRAVDLALNPAKLQALTNKLKEVRMTCPLFDTARWVRNLERAYYKMW 979
Query: 545 HRYCKG 550
+ YC G
Sbjct: 980 NLYCSG 985
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +DM I E A +P+ AE N+ +K++ ++D A+ Y A+ ++P
Sbjct: 118 LGAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRP 177
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL YT +G+++ AA+ +A+A NP +A++NLG L + G I A + Y
Sbjct: 178 NFCDAWSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCY 237
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
+ L+IDP A N LA ++ G DK
Sbjct: 238 IEALRIDPQFAIAWSN--LAGLFMEAGDLDK 266
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + D+AI Y A +P EA NN+G KD +++A+ CY+ L+++
Sbjct: 321 NLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVEEAINCYRSCLALQ 380
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y + AAA + AI+ + NNL V+Y+ G+ + AI
Sbjct: 381 ANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC 440
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L++DP + +A NR
Sbjct: 441 YTEVLRVDPTAADALVNR 458
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E D A+++Y+ A P A+A N G +YK +A+ YQ A+ +
Sbjct: 253 NLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISYQRAVQAR 312
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NL +Y QG++D A +AI +P + EAYNN+G +DAG + AI+
Sbjct: 313 PDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVEEAINC 372
Query: 123 YEQCLKIDPDSRNAGQN 139
Y CL + + A N
Sbjct: 373 YRSCLALQANHPQALTN 389
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y A P+ +A +NL Y + L++A +C + AL+I
Sbjct: 151 NMANAWKEKGDVDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAIN 210
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ +P +A A++NL L+ +AG + A+
Sbjct: 211 PRLVDAHSNLGNLMKAQGFIQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLY 270
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
Y++ +K+ P +A Y+N+G+
Sbjct: 271 YKEAVKLKPSFADA---------YLNQGN 290
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A A NP +A +NLG + K + + +A CY AL I
Sbjct: 185 NLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALRID 244
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G +D A ++A+ P++A+AY N G +Y+ G AI +
Sbjct: 245 PQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIIS 304
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y++ ++ PD A N LA Y +G D
Sbjct: 305 YQRAVQARPDYAMAYGN--LATIYYEQGQLD 333
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K+ A+ + + NP + LG IY N D + + AL+I PNF++ N+
Sbjct: 93 KYKEALEHGNIVYEKNPRRTDNLLLLGAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNM 152
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP- 131
+ +G +D A AI P + +A++NL Y G ++ A Q L I+P
Sbjct: 153 ANAWKEKGDVDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAINPR 212
Query: 132 --DSRNAGQNRLLAMNYINEGHD 152
D+ + N + A +I E ++
Sbjct: 213 LVDAHSNLGNLMKAQGFIQEAYN 235
>gi|288958280|ref|YP_003448621.1| hypothetical protein AZL_014390 [Azospirillum sp. B510]
gi|288910588|dbj|BAI72077.1| hypothetical protein AZL_014390 [Azospirillum sp. B510]
Length = 635
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 159/571 (27%), Positives = 251/571 (43%), Gaps = 37/571 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N GV E+ + D A A +P A + +++DR +LD+A +++ L ++
Sbjct: 73 NQGVLLRELGRLDEAEAPLRRALGIDPALVPARLAMAALHRDRGDLDRATAGFRLCLCLR 132
Query: 63 PNFSQSLNNLGVVYTVQGK-----MDAAAEM--IEKAIA-----ANPTYAEAYNNLGVLY 110
P+ ++ NL + +G+ DAAA + E+A+ A A+ L
Sbjct: 133 PDLAEGQANLALTLKERGQRGGPATDAAASIAGFERALRIGLPDAGGVLAQLVQQRRHLC 192
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA--HRDWGKRFMR 168
R G +L+ E R ++ ++ EG L A R R
Sbjct: 193 RWDGLAALSGRLVELV-------REGRTQQVHPWIFLGEGAGPALERACAERYAAWRTSG 245
Query: 169 LYSQYTSWDNTKDPERP-LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA 227
+ + S + P L IGY+S D+ H+ + I + HD +++V S
Sbjct: 246 VKPAFPSRSAAGPADGPKLRIGYLSADFHEHATAVLIAELVERHDRGRFEIVGCSYGPDD 305
Query: 228 DAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQP 287
+ R +++ + D+ G ++ A + + IDILV+L GHT N + G+ A +P
Sbjct: 306 GGPS---RRRLLAGFDRFLDLSGQTDEAAAQSIHQAGIDILVDLKGHTQNARPGIAARRP 362
Query: 288 APVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPV 347
APVQ W+GYP T G P IDY I D + P + ++ + E ++ LP+ + GPV
Sbjct: 363 APVQAQWLGYPGTLGSPAIDYVIADPVVVPADQQRFYSERIVHLPDSYQPNDRRRRIGPV 422
Query: 348 -----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR 402
C PA +G + F +FN KI P++ W RIL VP S L + P V
Sbjct: 423 PERADCGLPA--DG-VVFCAFNASYKIGPELFGRWCRILEGVPGSMLWLLEGPA---EVA 476
Query: 403 HRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVP 462
G+ R+ P L DH+ + L D+ LD+ P TT ++L+ G+P
Sbjct: 477 LNLRRAASARGVAPERLVFAPR-LPGPDHLARHRLADLFLDSSPVGAHTTASDALWAGLP 535
Query: 463 CVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMS 522
+T+ G A V SLL V L L+ + D Y A +LA LA LR+ L
Sbjct: 536 VLTVPGRTFAGRVAASLLRAVDLPELVLPDWDAYEATARRLAGQPAELAALRLRLERGRD 595
Query: 523 KSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+P+ D FA +E Y MW + G+ P
Sbjct: 596 TAPLFDTDRFARSIEVAYAAMWSMHRAGEPP 626
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + A + A + P N GV + +A Y A +
Sbjct: 5 NLGEASRRQGRLAEAEAHHRKALEWLPDFGGNHYNWGVTLQALGRPAEAAAAYGEAARLM 64
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + N GV+ G++D A + +A+ +P A + L+RD G + A
Sbjct: 65 PHFAPAPCNQGVLLRELGRLDEAEAPLRRALGIDPALVPARLAMAALHRDRGDLDRATAG 124
Query: 123 YEQCLKIDPD 132
+ CL + PD
Sbjct: 125 FRLCLCLRPD 134
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A +NLG + + L +A ++ AL P+F + N GV G+ AA +A
Sbjct: 2 ARSNLGEASRRQGRLAEAEAHHRKALEWLPDFGGNHYNWGVTLQALGRPAEAAAAYGEAA 61
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
P +A A N GVL R+ G + A + L IDP
Sbjct: 62 RLMPHFAPAPCNQGVLLRELGRLDEAEAPLRRALGIDP 99
>gi|392377850|ref|YP_004985009.1| conserved protein of unknown function [Azospirillum brasilense
Sp245]
gi|356879331|emb|CCD00243.1| conserved protein of unknown function [Azospirillum brasilense
Sp245]
Length = 645
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 173/613 (28%), Positives = 263/613 (42%), Gaps = 82/613 (13%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LGVA + + + + + P A+AC NL ++ + R L +A A+ +
Sbjct: 48 FLLGVAAYTLGRIEESQRHLAVTIALKPDLADACFNLALLLRRRGRLAEAAALQARAIRL 107
Query: 62 KPNFSQS-------LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114
P + + L LG + G++ +A ++ +A+A P AEA+ G RDAG
Sbjct: 108 APGQADAGQSNAGPLTTLGGMLRELGRVASARAVLRRAVAQAPDDAEAWRESGHALRDAG 167
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLA-----------------MNYINEGHDDKL-- 155
A AY + ++DP + +RL A + I+ G L
Sbjct: 168 EPGAAAVAYGRAYRLDPGRTESLGDRLHAALSHCDWSGYDALCREILAVIDSGRGIALPL 227
Query: 156 -------FEAHRDWGKR-FMRLYSQYTSW-DNTKDPERP-------LVIGYVSPDYFTHS 199
A +D R F R Q + P P L + Y+S D+ H+
Sbjct: 228 LTLLIDTSAAQQDRAARHFHRAVVQPAAVPQGAAVPVAPPLGADGRLTVAYLSADFHEHA 287
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
+Y HD ++VV S T R E + DI G D ++ AM
Sbjct: 288 TAYLAAELFELHDRDRFRVVACSYGPDDGGPTRRRLEAAFDA---FHDIRGCDAEQAQAM 344
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE 319
+ + + ILV+L G+T + + +A + APVQV ++GYP T G +DY I D PPE
Sbjct: 345 LTAEGVHILVDLKGYTRHVRFDFLARRLAPVQVAYLGYPGTMGSDVMDYVIGDRFVTPPE 404
Query: 320 TKQKHVEELIRLPECFLCY-------TPSPEAGPVCPTPALTNGFITFGSFNNLAKITPK 372
+ + E L+ +P+ + P P+ C P +GF+ F +FN KITP
Sbjct: 405 HQPHYRERLVIMPDSYQVNDRRRPLDAPVPDRA-ACGLP--PDGFV-FCAFNAPFKITPS 460
Query: 373 VLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR-------VDLLPLI 425
+ +W R+L VP S L +L + G ++LR VD L+
Sbjct: 461 LFGLWMRVLARVPGSVL---------------WLQQPGRDGTDNLRREAARRGVDPGRLV 505
Query: 426 LLNH----DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
H +H+ Y L D+ LD+FPY G TT ++L+MG+P VT G A V LL
Sbjct: 506 FAPHRPQAEHLARYRLADLFLDSFPYTGHTTVSDALWMGLPVVTRMGDTFASRVAAGLLN 565
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
GL + + D Y LA++LA D LA R L + +P+ D F LE YR
Sbjct: 566 AAGLPETVTTSFDGYEALAVRLAGDPATLAGYRRRLAAARATAPLFDSPRFTRHLEHAYR 625
Query: 542 NMWHRYCKGDVPS 554
MW R+ G P+
Sbjct: 626 TMWDRHAAGLPPA 638
>gi|392378325|ref|YP_004985485.1| conserved protein of unknown function; putative TPR domain
[Azospirillum brasilense Sp245]
gi|356879807|emb|CCD00735.1| conserved protein of unknown function; putative TPR domain
[Azospirillum brasilense Sp245]
Length = 827
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 188/376 (50%), Gaps = 20/376 (5%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+S D+ H+ +Y + L HD + V YS + D +R R + +
Sbjct: 463 LRIGYLSADFHEHATAYLMAELLERHDRTRFAVTAYSTGID-DGSPMRRRLTAAVERFV- 520
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
D+ ++ A + D IDILV+L G+TA + ++A +PAPVQV W+GYP T G
Sbjct: 521 -DLRDHADRAAAQAIAADGIDILVDLKGYTAFARTAILAARPAPVQVNWLGYPGTMGADF 579
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCP-TPALTN------GFI 358
ID + D++ PP + + E ++RLP C Y P+ + TP+ + GF+
Sbjct: 580 IDVILADAVTIPPGEEGFYSEAVVRLPHC---YQPNDRHRAIAERTPSRADCGLPEDGFV 636
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESL 417
F FNN K+TP V VWAR+L AVP S L + P ++R + G+
Sbjct: 637 -FCCFNNPYKLTPAVFDVWARLLRAVPGSVLWLYAGNPLVAGNLRGEAAAR----GVAPD 691
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P L +H+ + L D+ LDT PY TT ++L+ G+P VT G+ A V
Sbjct: 692 RLVFAPPRPLV-EHLARHRLADLFLDTLPYNAHTTASDALWTGLPVVTCRGATFAGRVAA 750
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
SLL VGL L+ + Y LAL LA D LA L+ L + SP+ DG FA LE
Sbjct: 751 SLLDTVGLPELVTDSPAAYEALALGLARDPQRLAGLKARLAAARTASPLFDGDRFARDLE 810
Query: 538 STYRNMWHRYCKGDVP 553
YR +W R+ P
Sbjct: 811 DAYRAIWQRFAPAGDP 826
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 54/130 (41%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGVA + + A Y A P A NL V + +A Y+ ALS
Sbjct: 116 NLGVALQDQGRPAEAETAYRDALRDRPEDAGTWKNLAVALEALGRTGEAETAYREALSRN 175
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P SLNNLGV+ G+ D A + + A NP + LG AG A+ A
Sbjct: 176 PEHGVSLNNLGVLVLAAGRRDEAGRIGRRMAALNPADRNGWMLLGTAAHAAGHRDEAVRA 235
Query: 123 YEQCLKIDPD 132
+++ PD
Sbjct: 236 NAVAVRLAPD 245
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P E NNLGV +D+ +A Y+ AL +P + + NL V G+ A
Sbjct: 108 PGLGEVWNNLGVALQDQGRPAEAETAYRDALRDRPEDAGTWKNLAVALEALGRTGEAETA 167
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+A++ NP + + NNLGVL AG A + ++P RN LL
Sbjct: 168 YREALSRNPEHGVSLNNLGVLVLAAGRRDEAGRIGRRMAALNPADRNGWM--LLGTAAHA 225
Query: 149 EGHDDKLFEAH 159
GH D+ A+
Sbjct: 226 AGHRDEAVRAN 236
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 42/99 (42%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A Y AL + P+ + + + QG+ A +AA P E +NNLGV
Sbjct: 62 AGAVYAAALKLAPDSPDAHYGVALSLHAQGRPAEAEPHYRTVLAACPGLGEVWNNLGVAL 121
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
+D G + A AY L+ P+ +N +A+ +
Sbjct: 122 QDQGRPAEAETAYRDALRDRPEDAGTWKNLAVALEALGR 160
>gi|119357637|ref|YP_912281.1| hypothetical protein Cpha266_1841 [Chlorobium phaeobacteroides DSM
266]
gi|119354986|gb|ABL65857.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 3035
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 162/575 (28%), Positives = 257/575 (44%), Gaps = 51/575 (8%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+V ++ A P A + NN G+ ++ ++A+ Y+ A+++KP+F + +N G
Sbjct: 1678 ALVLFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIAVKPDFIEPYSNRGNTL 1737
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD---- 132
+ + A + AIA P YAE Y N G + A+ +YE+ L + PD
Sbjct: 1738 QELKRYEEALACYDSAIALKPDYAEPYYNQGNALLELKRDEDAVRSYEKALALKPDYDFL 1797
Query: 133 SRNAGQNRLLAMNYI---NEGHD-DKLFEAHRDWGKRFM---------------RLYSQ- 172
S R+ +++ ++ H +K E H F R+Y+Q
Sbjct: 1798 SGLCLHIRMKICDWLAFDDQAHQLEKKIECHEKASPPFAVLSITESLSLQQEAARVYAQE 1857
Query: 173 -----YTSWDNTKDPERPLV-IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVK 226
T K P R + IGY S D+ H VS HD +++ +S
Sbjct: 1858 KFPADQTLSSIAKRPRRDTIRIGYYSADFCNHPVSILTAELFEMHDRARFELYAFSCGTN 1917
Query: 227 ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
+ R E + + D+ +K + M R+ +IDI V+L G T ++ G+ A +
Sbjct: 1918 TGDEMRRRLEVAFDR---FLDVRNHSDKDIVLMSRDLEIDIAVDLGGFTMGSRTGIFALR 1974
Query: 287 PAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP 346
APVQV++IGY T G IDY I D + P +++ + E++ L + T A
Sbjct: 1975 AAPVQVSYIGYLGTMGAGYIDYLIADEVLIPEGSRKHYTEKIAYLSSYQVNDTKRRIADR 2034
Query: 347 V-----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
V C P +GF+ F FNN KITP W RIL VP S L + ++
Sbjct: 2035 VFTRAECGLP--ESGFV-FCCFNNNYKITPATFDGWMRILGQVPGSVLFLYTD---NEAA 2088
Query: 402 RHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLY 458
E G++ R+ LPL +H+ Y + D+ LDT PY TT ++L+
Sbjct: 2089 ASNLKKEAESRGVKRDRLIFGKRLPLA----EHLARYRVADLFLDTNPYNAGTTASDALW 2144
Query: 459 MGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLR 518
G+P +T+ G A + SLLT +GL LI ++EY LA++LA D + R L
Sbjct: 2145 AGLPVLTLRGESFASRMAASLLTAIGLPELITSGQEEYEALAVELALDPEKMRATREKLA 2204
Query: 519 DLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ + D + F +E+ Y M+ RY +G P
Sbjct: 2205 RNRLTTRLFDTRLFTRNIEAAYLAMYERYQEGLPP 2239
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 166/595 (27%), Positives = 270/595 (45%), Gaps = 63/595 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV + + + A+ YE A P A+A N V++ D D ++A+ Y A+ +K
Sbjct: 1019 NLGVTRKVLKRDEEALGSYEKAIALKPDFADAYYNRAVLFYDLDRYEEALASYDRAIVLK 1078
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + +N G + + A EKAIA P +A+A+ N G + A+ +
Sbjct: 1079 PDFVEVFSNRGNALLKLKRYEEALGSYEKAIALKPDFADAFFNQGNALLELKRYEDALWS 1138
Query: 123 YEQCLKIDPD----------------SRNAGQNRLLAMNYINEGHD------------DK 154
YE+ L PD +A ++++ + E H+ D
Sbjct: 1139 YEKTLACKPDYDFLSGFCLYTRMKICDWSAFEDQVHQLEKKIECHEKVVTPFPLLAIKDD 1198
Query: 155 LFEAHRDWGKRFMRLYSQYTSWDN---TKDPERP----LVIGYVSPDYFTHSVSYFIEAP 207
LF H +R++++ N + P+R + IGY S D+ H VS+
Sbjct: 1199 LFLQHD-----VVRIFAKEKFPANQTLSPIPKRSRRDTIRIGYYSADFCNHPVSFLTAEL 1253
Query: 208 LVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
HD +++ +S + R E + + D+ +K +A M R+ +IDI
Sbjct: 1254 FEMHDRGRFELYAFSCGSDTGDEMRRRLEVAFDR---FLDVRNHSDKDIALMSRDLEIDI 1310
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
V+L G T ++ G+ A + APVQV++IGY T G IDY I D + P +++ + E+
Sbjct: 1311 AVDLGGFTMGSRTGIFALRAAPVQVSYIGYLGTMGAGYIDYLIADEVLIPEGSRKHYTEK 1370
Query: 328 LIRLPECFLCYTPSPEAGPV-----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILC 382
+ L + T A V C P +GF+ F FNN KITP W RIL
Sbjct: 1371 IAYLSSYQVNDTKRRIADRVFTRAECGLP--ESGFV-FCCFNNNYKITPATFDGWMRILG 1427
Query: 383 AVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLM 438
VP S L + + +++R S G+++ R+ LP+ +++ Y +
Sbjct: 1428 QVPGSVLWLFEENAKAAENLRREAASR----GVDAGRLIFGKRLPVA----EYLARYRVA 1479
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D+ LDT PY TT ++L+ G+P +T+ G A + SLLT +GL LI ++EY
Sbjct: 1480 DLFLDTLPYNAGTTASDALWAGLPVLTLRGESFASRMAASLLTAIGLPELITSGQEEYES 1539
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
LA++LA D + R L + + D F +E+ Y M+ RY +G P
Sbjct: 1540 LAIELALDPEMMRATREKLARNRLTTRLFDTGRFTRNIEAAYLAMYERYQEGLPP 1594
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 155/590 (26%), Positives = 265/590 (44%), Gaps = 53/590 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E+ +++ A++ Y+ A AE +N G + ++ ++A+ Y+ A+++K
Sbjct: 2445 NRGNTLQELKRYEEALMSYKQAIALKSDYAEFYSNYGNVLEELKRYEEALLNYEQAIALK 2504
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+FS + +NLG V + A +KAI NP EAY G + A+ +
Sbjct: 2505 PDFSDAYSNLGNTLQVLMRYRDALASYDKAIGLNPDCIEAYCGQGNALLELMRYEEALVS 2564
Query: 123 YEQCLKIDPD----------------SRNAGQNRLLAMNYINEGHDDKL-------FEAH 159
YE+ L + P+ + +A +++ + E H+
Sbjct: 2565 YERALALKPEYDFLPGLCLYTRMKICAWSAFDDQVHQLEKKIERHEKASPPLVFLSITES 2624
Query: 160 RDWGKRFMRLYSQYTSWDN---TKDPERP----LVIGYVSPDYFTHSVSYFIEAPLVYHD 212
+ R+Y+Q N + P+R + IGY S D+ H VS+ H
Sbjct: 2625 LSLQQEAARVYAQEIFPPNQTLSPIPKRSRRDTIRIGYFSADFCHHPVSFLTAELFETHH 2684
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+++ +S + R E + + D+ +K +A + R +IDI ++L
Sbjct: 2685 KDRFELYAFSFGQDTGDEMRRRLEVAFDR---FLDVRNYSDKDIALLSRTLEIDIAIDLG 2741
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G T ++ G+ A + APVQV++IGY T G IDY + D + P +++ + E++ L
Sbjct: 2742 GFTMGSRTGIFALRAAPVQVSYIGYLGTMGAGYIDYLLADDVLIPEGSRKHYTEKIAYLS 2801
Query: 333 ECFLCYTPSPEAGPV-----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
+ T A V C P +GF+ F FNN KITP W RIL VP S
Sbjct: 2802 SYQVNDTKRRIADRVFTRAECGLP--ESGFV-FCCFNNTYKITPATFDGWMRILGQVPGS 2858
Query: 388 RL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDISLD 443
L + + +++R S G+++ R+ LP+ +++ Y + D+ LD
Sbjct: 2859 VLWLYEENAKAAENLRREAASR----GVDAGRLIFGKRLPVA----EYLARYRVADLFLD 2910
Query: 444 TFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
T PY TT ++L+ G+P +T+ G A + SLLT +GL LI ++EY LA++L
Sbjct: 2911 TLPYNAGTTASDALWAGLPVLTLRGESFASRMAASLLTAIGLPELITSGQEEYESLAIEL 2970
Query: 504 ASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A D + R L + + D F +E+ + M+ RY +G P
Sbjct: 2971 ALDPEMMRVTREKLARNRLTTRLFDTGRFTRNIEAAFEAMYERYQEGLPP 3020
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 163/626 (26%), Positives = 263/626 (42%), Gaps = 89/626 (14%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N G A M +++ A+ YE A NP A+A N G+ + D A+E Y+ A+++
Sbjct: 169 FNRGNAVMAMHRYEDALASYEKAIALNPCFADAYYNKGLALQKLMRYDDALERYKQAIAL 228
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP------------------------ 97
KP+++++ + G V+ + + A E IA NP
Sbjct: 229 KPDYTEAFLHQGNVFMALQRYENALLSYEHVIALNPDDVEAYTNRGYALQELKRYGDALL 288
Query: 98 TY----------AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD--------------- 132
+Y A+AYNN G + A+ +Y L + PD
Sbjct: 289 SYDRVLALKCDDADAYNNRGNAFMALKRYEDALGSYNHVLALKPDYDFLSGLCLYTRMKI 348
Query: 133 -SRNAGQNRLLAMNYINEGHDDKL----FEAHRD------------WGKRFMRLYSQYTS 175
NA +++ + E H+ F A +D G++F + S
Sbjct: 349 CEWNAFDDQVDQLEKKIERHEKATLPFPFLAIKDSLSLQQDAARIFAGEKFP--VTHLLS 406
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR 235
+ + IGY S D+ H VS+ HD +++ +S R
Sbjct: 407 PIPKRSRRDTIRIGYFSADFCNHPVSFLTAELFEMHDRGRFELYAFSCGSDTGDGMRRRL 466
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
E + + D+ +K +A + R +IDI ++L G T ++ G+ A + APVQV++I
Sbjct: 467 EVAFEH---FHDVRNHSDKDIALLARSLEIDIAIDLGGFTMGSRTGIFALRAAPVQVSYI 523
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPV-----CPT 350
GY T G IDY I D + P +++ + E++ L + T A V C
Sbjct: 524 GYLGTMGAGYIDYLIADEVLIPEGSRKHYTEKIAYLSSYQVNDTKRRIADRVFTRAECGL 583
Query: 351 PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLE 410
P +GF+ F FNN KITP W RIL V S L + ++ E
Sbjct: 584 P--ESGFV-FCCFNNNYKITPATFDGWMRILGQVEGSVLFLYTD---NEAAASNLKKEAE 637
Query: 411 QLGLESLRV---DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
G++ R+ LPL +H+ Y + D+ LDT PY TT ++L+ G+P +T+
Sbjct: 638 SRGVKRDRLIFGKRLPLA----EHLARYRVADLFLDTLPYNAGTTASDALWAGLPVLTLR 693
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G A + SLLT +GL LI ++EY A++LA D + R L + +
Sbjct: 694 GESFASRMAASLLTAIGLPELITTTQEEYEARAIELALDPEKMRATREKLARNRLTTRLF 753
Query: 528 DGQNFALGLESTYRNMWHRYCKGDVP 553
D + F +E+ Y M+ RY +G P
Sbjct: 754 DTRLFTRNIEAAYLAMYERYQEGLPP 779
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E+ +++ A+ YE A P E ++L V+ ++A+ Y+ L ++
Sbjct: 917 NRGSVLLELKRYEEALASYERAIAIKPDHTEFYSDLAVVLLALKRYEEALATYERVLELR 976
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ NN G V + + A EKAIA NP YAEAY+NLGV + A+ +
Sbjct: 977 RDDPVVYNNRGNVLLELKRYEEALGSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGS 1036
Query: 123 YEQCLKIDPDSRNAGQNR 140
YE+ + + PD +A NR
Sbjct: 1037 YEKAIALKPDFADAYYNR 1054
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E+ +++ A+ YE A NP AEA +NLGV K ++A+ Y+ A+++K
Sbjct: 985 NRGNVLLELKRYEEALGSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGSYEKAIALK 1044
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + N V++ + + A ++AI P + E ++N G A+ +
Sbjct: 1045 PDFADAYYNRAVLFYDLDRYEEALASYDRAIVLKPDFVEVFSNRGNALLKLKRYEEALGS 1104
Query: 123 YEQCLKIDPDSRNAGQNR 140
YE+ + + PD +A N+
Sbjct: 1105 YEKAIALKPDFADAFFNQ 1122
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+L V + +++ A+ YE NN G + + ++A+ Y+ A+++
Sbjct: 951 DLAVVLLALKRYEEALATYERVLELRRDDPVVYNNRGNVLLELKRYEEALGSYEKAIALN 1010
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ +NLGV V + + A EKAIA P +A+AY N VL+ D A+ +
Sbjct: 1011 PDYAEAYSNLGVTRKVLKRDEEALGSYEKAIALKPDFADAYYNRAVLFYDLDRYEEALAS 1070
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y++ + + PD NR
Sbjct: 1071 YDRAIVLKPDFVEVFSNR 1088
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
+A+ + D A Y+ NP +A L I R+ +KAV + AL+I P+
Sbjct: 36 ALAFHQNGALDEAEALYQAILLQNPEHFDALQLLATIAAQRNESEKAVALFDQALNINPD 95
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
S SLNN G + + A E+A+A P YA+AY N G + + A++++E
Sbjct: 96 HSGSLNNRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGNVLMELLRCEDALESFE 155
Query: 125 QCLKIDPDSRNAGQNR 140
+ + + PD A NR
Sbjct: 156 KAIALKPDYAPAYFNR 171
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 75/136 (55%), Gaps = 12/136 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N GVA ++ ++ A+ ++ A P AEAC+N G ++ ++A+ Y+ A+++K
Sbjct: 2411 NRGVAMMKLKRYADALESHDKAIALRPDYAEACSNRGNTLQELKRYEEALMSYKQAIALK 2470
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG------VLYRDAGSI 116
++++ +N G V + + A E+AIA P +++AY+NLG + YRD
Sbjct: 2471 SDYAEFYSNYGNVLEELKRYEEALLNYEQAIALKPDFSDAYSNLGNTLQVLMRYRD---- 2526
Query: 117 SLAIDAYEQCLKIDPD 132
A+ +Y++ + ++PD
Sbjct: 2527 --ALASYDKAIGLNPD 2540
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A I R + +KA+ + AL+IKP+ ++SLNN G+ + + A
Sbjct: 2301 PEHFDALQLSATIAAQRHDSEKALALFDQALAIKPDHARSLNNRGIALQELKRYEEALAS 2360
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
E+ +A P YA AY+N G + A+ +Y+Q + + D+ NA NR +AM
Sbjct: 2361 YERLLAVKPDYAMAYSNRGNTLQGLRRYEEAVSSYDQAIALRSDNANAYSNRGVAM 2416
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G A + +++ A+ +E A P A+A N G + + + A+E ++ A+++K
Sbjct: 102 NRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGNVLMELLRCEDALESFEKAIALK 161
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + N G + + A EKAIA NP +A+AY N G+ + A++
Sbjct: 162 PDYAPAYFNRGNAVMAMHRYEDALASYEKAIALNPCFADAYYNKGLALQKLMRYDDALER 221
Query: 123 YEQCLKIDPD 132
Y+Q + + PD
Sbjct: 222 YKQAIALKPD 231
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A Y F+P +A I R + + A+ + AL+IKP+ ++SLNN
Sbjct: 1640 RLDEAEALYREILSFSPEHFDALQLSATIAAQRHDSENALVLFDQALAIKPDHARSLNNR 1699
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G+ + + A E+AIA P + E Y+N G ++ A+ Y+ + + PD
Sbjct: 1700 GIALQELKRYEEALASYERAIAVKPDFIEPYSNRGNTLQELKRYEEALACYDSAIALKPD 1759
Query: 133 SRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
A Y N+G + L E RD
Sbjct: 1760 ---------YAEPYYNQG--NALLELKRD 1777
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
+ A+ ++ A + NP + + NN G + + A+ ++ A+++KP+++ + N G
Sbjct: 80 EKAVALFDQALNINPDHSGSLNNRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGN 139
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
V + + A E EKAIA P YA AY N G A+ +YE+ + ++P
Sbjct: 140 VLMELLRCEDALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKAIALNPCFA 199
Query: 135 NAGQNRLLAMNYINEGHDDKL 155
+A N+ LA+ + +DD L
Sbjct: 200 DAYYNKGLALQKLMR-YDDAL 219
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A E+ +++ A+ YE P A A +N G + ++AV Y A++++
Sbjct: 2343 NRGIALQELKRYEEALASYERLLAVKPDYAMAYSNRGNTLQGLRRYEEAVSSYDQAIALR 2402
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ + + +N GV + A E +KAIA P YAEA +N G ++ A+ +
Sbjct: 2403 SDNANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEACSNRGNTLQELKRYEEALMS 2462
Query: 123 YEQCLKIDPD 132
Y+Q + + D
Sbjct: 2463 YKQAIALKSD 2472
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
+ A+ ++ A P A + NN G+ ++ ++A+ Y+ L++KP+++ + +N G
Sbjct: 2321 EKALALFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERLLAVKPDYAMAYSNRG- 2379
Query: 75 VYTVQG--KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
T+QG + + A ++AIA A AY+N GV + A++++++ + + PD
Sbjct: 2380 -NTLQGLRRYEEAVSSYDQAIALRSDNANAYSNRGVAMMKLKRYADALESHDKAIALRPD 2438
Query: 133 SRNAGQNR 140
A NR
Sbjct: 2439 YAEACSNR 2446
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
+ A+V ++ A NP + NN G + ++A++ Y+ AL +KP++ + N G
Sbjct: 861 EQALVLFDQAISINPGHPGSRNNRGNALRALQRYEEALDSYEKALQLKPDYVDAYTNRGS 920
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI---DP 131
V + + A E+AIA P + E Y++L V+ A+ YE+ L++ DP
Sbjct: 921 VLLELKRYEEALASYERAIAIKPDHTEFYSDLAVVLLALKRYEEALATYERVLELRRDDP 980
Query: 132 DSRNAGQNRLLAMNYINEG 150
N N LL + E
Sbjct: 981 VVYNNRGNVLLELKRYEEA 999
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E+L+ + A+ +E A P A A N G + A+ Y+ A+++
Sbjct: 136 NRGNVLMELLRCEDALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKAIALN 195
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + N G+ + D A E ++AIA P Y EA+ + G ++ A+ +
Sbjct: 196 PCFADAYYNKGLALQKLMRYDDALERYKQAIALKPDYTEAFLHQGNVFMALQRYENALLS 255
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
YE + ++PD A NR A+ + D
Sbjct: 256 YEHVIALNPDDVEAYTNRGYALQELKRYGD 285
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G + +++ A+ Y+ A A A +N GV A+E + A++++
Sbjct: 2377 NRGNTLQGLRRYEEAVSSYDQAIALRSDNANAYSNRGVAMMKLKRYADALESHDKAIALR 2436
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ +N G + + A ++AIA YAE Y+N G + + A+
Sbjct: 2437 PDYAEACSNRGNTLQELKRYEEALMSYKQAIALKSDYAEFYSNYGNVLEELKRYEEALLN 2496
Query: 123 YEQCLKIDPDSRNAGQN 139
YEQ + + PD +A N
Sbjct: 2497 YEQAIALKPDFSDAYSN 2513
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 52/120 (43%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D A Y +P +A I R + ++A+ + A+SI P S NN
Sbjct: 825 RLDEAEALYREILSSSPEHFDALQLSATIAAQRHDSEQALVLFDQAISINPGHPGSRNNR 884
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + + A + EKA+ P Y +AY N G + + A+ +YE+ + I PD
Sbjct: 885 GNALRALQRYEEALDSYEKALQLKPDYVDAYTNRGSVLLELKRYEEALASYERAIAIKPD 944
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
LD+A Y+ LS P +L + + + A + ++AI+ NP + + NN
Sbjct: 825 RLDEAEALYREILSSSPEHFDALQLSATIAAQRHDSEQALVLFDQAISINPGHPGSRNNR 884
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
G R A+D+YE+ L++ PD +A NR
Sbjct: 885 GNALRALQRYEEALDSYEKALQLKPDYVDAYTNR 918
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
LD+A Q LS P +L + + + A + ++A+A P +A + NN
Sbjct: 2285 RLDEAEAICQEILSSIPEHFDALQLSATIAAQRHDSEKALALFDQALAIKPDHARSLNNR 2344
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
G+ ++ A+ +YE+ L + PD A NR
Sbjct: 2345 GIALQELKRYEEALASYERLLAVKPDYAMAYSNR 2378
>gi|157413635|ref|YP_001484501.1| O-linked N-acetylglucosamine transferase [Prochlorococcus marinus
str. MIT 9215]
gi|157388210|gb|ABV50915.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Prochlorococcus marinus str. MIT 9215]
Length = 632
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 150/588 (25%), Positives = 266/588 (45%), Gaps = 54/588 (9%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVI-YKDRDNLDKAVECYQMAL 59
+NLG + F AI ++E A E + Y N KA E + +L
Sbjct: 60 FFNLGSIEFQSNNFLEAISYFERAKIIKLKNQEQIYTFLIYCYGKLKNYSKATELFHESL 119
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
P + + + + + ++AI+ NP +A +NLG +Y S A
Sbjct: 120 EKYPRSEKLIFTYAEIAKEKNNFQEFIRLYKEAISINPNNYKALSNLGAVYEKLKEFSNA 179
Query: 120 IDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFM-------RLYSQ 172
I+ Y++ ++I PD + + L + ++ + D+ D+ K+ + + S
Sbjct: 180 IETYKKAIEIAPDVSHLKVDYLSSKSFACDWSDE-------DYKKQILTSVGIVGQAISP 232
Query: 173 YTSWDNTKDPERPLV--------------------------IGYVSPDYFTHSVSYFIEA 206
+ DP++ L+ IGY S D++ H+ + ++
Sbjct: 233 FELLPLEDDPQKHLIRAENFFKQRFKKTSKKLKFKPKNKIRIGYFSSDFYRHATMFLMKR 292
Query: 207 PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
HD +++ +YS +D + I F +K+ K + +I + +++ A + R+D++D
Sbjct: 293 IFECHDKTKFEIFIYSF---SDYEDI-FTDKLKKNVKKFINITSLSDEEAADIARKDELD 348
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
I V+L G T + +L + + + AP+Q++++GYP T G IDY I D + P K+ + E
Sbjct: 349 IAVDLKGFTKDTRLSIFSLRVAPIQISYLGYPGTIGSSCIDYIIADKVVIPANLKRFYSE 408
Query: 327 ELIRLPECFLCYTPSPEAGPVCPTPA---LTNGFITFGSFNNLAKITPKVLQVWARILCA 383
++I +P C+ C + L+ F FN KIT +W R+L
Sbjct: 409 KVIYMPNCYQCNDNKRLVSKKKFQKSDFGLSEHNFVFACFNANNKITLVEFNIWMRLLKK 468
Query: 384 VPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
V NS L + K + +++ E+ G++S R+ + +LN DH+ D+ L
Sbjct: 469 VKNSILWLYKSNNYSMMNLKKE----AEKQGVQSKRI-IFADKMLNEDHLSRIKFADLFL 523
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
DTF Y TT ++L+ VP VT G + V SLLT + L+ LI K EY LA +
Sbjct: 524 DTFHYNAHTTASDALWAEVPVVTKQGQSFSARVCSSLLTALNLEELITKENFEYENLAYK 583
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
+ASD + L +LR L++ S + D + F LE+ Y+ + + + K
Sbjct: 584 IASDKSYLMSLRKKLKEEKLTSSLFDSEKFTKDLENIYQELINAHSKN 631
>gi|365891968|ref|ZP_09430322.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein (fragment) [Bradyrhizobium sp. STM
3809]
gi|365332038|emb|CCE02853.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein (fragment) [Bradyrhizobium sp. STM
3809]
Length = 305
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 170/305 (55%), Gaps = 3/305 (0%)
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
+W D + + ++A ++ D++DILV+L+GH+A N+L + A +PAP+QVT G TGL
Sbjct: 1 MWVDAMQMSDDELADRIQADQVDILVDLSGHSAGNRLTVFARKPAPIQVTAWGNATGTGL 60
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
PT+DY D + P + E + LP + P P+A P P P L NG +TFG F
Sbjct: 61 PTMDYFFADPVTVPQAVRPLFAERVYDLP-ALITTDPLPDAQP-TPLPMLRNGHVTFGVF 118
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N + KI+ +VL VWA +L A+P++R+V+K +R ++ G+ R+ +
Sbjct: 119 NRIDKISDQVLNVWAVLLRAIPSARIVIKNGALDDAFLRDGLIARFAAQGIAEHRLTCIG 178
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
+ +H+ A++ +DISLD FP G +T ESL GVP V G+ A G +++ +
Sbjct: 179 S-SMRQEHIAAFAGIDISLDPFPQNGGVSTWESLQAGVPVVAKLGNSSASRAGGAIVKAI 237
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL +A+++D Y+ +AL+ A+D L+ +R L ++ S + Q + +E YR
Sbjct: 238 GLDAWVAEDDDGYIAIALKHAADPAELSRVRAELPGRVANSAAGNVQTYTRKVEEGYRQF 297
Query: 544 WHRYC 548
W +C
Sbjct: 298 WRDFC 302
>gi|147857906|emb|CAN80393.1| hypothetical protein VITISV_001595 [Vitis vinifera]
Length = 566
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 237/523 (45%), Gaps = 55/523 (10%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
+NL +IYK + N A+ CY L I P + L N G + G++ A + AI
Sbjct: 78 SNLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTFKEIGRVSEAIQDYIHAITI 137
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
PT AEA+ NL Y+D+G + A+ +Y+Q L + PD A N L +
Sbjct: 138 RPTMAEAHANLASAYKDSGHVEAAVKSYKQALVLRPDFPEATCNLLHTLQ---------- 187
Query: 156 FEAHRDWGKRFMRLYSQYTSWDNTKDPERPLV---IGYVSPDYFTHSVSYFIEAPLVYHD 212
M + + P PL+ I Y+S D+ H +S+ + + H+
Sbjct: 188 -----------MSVLPSVQPFHAIAYPIDPLLALDIRYLSSDFGNHPLSHLMGSVFGMHN 236
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+N +V Y+ + + +R+++ + + D+ + +A ++ EDKI IL+ L
Sbjct: 237 RENVEVFCYAL---SPNDSTEWRQRIQSEAEHFIDVSAMSSDMIAKLINEDKIQILINLN 293
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL-ADPPETKQKHVEELIRL 331
G+T + + A QPAP+QV+++G+P TTG IDY +TD D + +H L
Sbjct: 294 GYTKGARNEIFAMQPAPIQVSYMGFPGTTGASYIDYLVTDEKNRDVLDPNCQHKRSDYGL 353
Query: 332 PECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV 391
PE + FI F FN L K+ P++ W IL VPNS L +
Sbjct: 354 PE---------------------DKFI-FACFNQLYKMDPEIFNTWCNILKRVPNSALWL 391
Query: 392 KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTT 451
P +R R + + GL+ R+ + + + H+H++ +L D+ LDT T
Sbjct: 392 LRFP-AAGEMRLRSYAVAQ--GLQPDRI-IFTDVAMKHEHIRRSALADLFLDTPLCNAHT 447
Query: 452 TTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-KHLIAKNEDEYVQLALQLASDVTAL 510
T + L+ G+P VT+ A V SL GL + +I + EY + A+ LA + L
Sbjct: 448 TGTDILWAGLPMVTLPLEKMATRVAGSLCLATGLGEEMIVSSMKEYEEKAVSLAMNRPKL 507
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L L+ + P+ D + LE Y MW+ +C G P
Sbjct: 508 QALTNKLKAVRMSCPLFDTARWVRNLERAYFKMWNVHCSGSRP 550
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G + E+ + AI Y A P AEA NL YKD +++ AV+ Y+ AL
Sbjct: 111 LVNRGNTFKEIGRVSEAIQDYIHAITIRPTMAEAHANLASAYKDSGHVEAAVKSYKQALV 170
Query: 61 IKPNFSQSLNNLGVVYTVQ 79
++P+F ++ NL ++T+Q
Sbjct: 171 LRPDFPEATCNL--LHTLQ 187
>gi|84503473|ref|ZP_01001528.1| TPR repeat protein [Oceanicola batsensis HTCC2597]
gi|84388151|gb|EAQ01104.1| TPR repeat protein [Oceanicola batsensis HTCC2597]
Length = 630
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 170/596 (28%), Positives = 250/596 (41%), Gaps = 58/596 (9%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG A E D A + A +P A A NLG++ + L +A Y AL P
Sbjct: 46 LGGACTESGDLDRAEAAFRQAASVDPAHAGAQYNLGLVLQRAGRLGEARTAYARALRRDP 105
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
++ NN+G V G+ D A K +A P A++++NLG R+ G A+ A+
Sbjct: 106 AHVKAQNNIGNVLAGLGRFDQAEAAHRKTLALRPGDADSWSNLGHALREQGRHDEALAAW 165
Query: 124 E--------------QCLKIDPDSRNAGQNRLLAMNYINEGHDDKL-----FEAHRDWGK 164
Q L++ D + A G + + F + D
Sbjct: 166 RHALGHAPGHAAAASQMLRLQWDHCDFNAFATFAPRAAQLGTEGQPVPPLPFLSAEDHPA 225
Query: 165 RFMRLYSQYTSWDNTKDPE-------RP--LVIGYVSPDYFTHSVSYFIEAPLVYHDYQN 215
R + + T+ P RP L IGY S H + L HD
Sbjct: 226 RQRQRSEGWARGIVTRPPPVWQPAAVRPARLRIGYFSGSMHDHPTLRLLSGLLRAHDRSR 285
Query: 216 YKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT 275
++V VYS +T R + + D+ + +A + R +DI ++L GHT
Sbjct: 286 FEVFVYS---HGRHRTGDLRAGASRTVDGFHDVEQLSPGGIAHLARHHGLDIAIDLDGHT 342
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
+ + + AC+PAPV ++GYP TTG IDY + D + P + + E +I LP+
Sbjct: 343 RDARPAIFACRPAPVTAAFLGYPGTTGAEFIDYLVADPVVVPDAERAHYSESVIFLPDT- 401
Query: 336 LCYTPSPEAGPVCPTPALTNGFITFG---------SFNNLAKITPKVLQVWARILCAVPN 386
Y P+ A P P +T G FN KI P+ +W R+L AVP
Sbjct: 402 --YQPNDSA---RPEPRITGTRADHGLPEEGPVLCCFNAGRKIGPQEFDLWMRLLRAVPA 456
Query: 387 SRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDISL 442
S L +++ P ++R + G++ R+ D P + H+ Y DI L
Sbjct: 457 SVLWLLRSNPRMVGNLR----GEAARRGVDPDRLVFADPCP----HESHIARYVHADIVL 508
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
DTF Y G TTT ++L+ GVP VTMAG A V SLL+ GL L+ + EY L+L
Sbjct: 509 DTFRYNGHTTTSDALWAGVPVVTMAGRQFAARVAASLLSASGLPDLVTETVQEYEALSLA 568
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
LA+D LA L +R + D FA E+ Y KG P R+
Sbjct: 569 LATDRARLAELGERVRTARRTGALFDAPRFARAFEAGLDAAHALYRKGQPPEDIRL 624
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
N LG + +LD+A ++ A S+ P + + NLG+V G++ A +A+
Sbjct: 44 NLLGGACTESGDLDRAEAAFRQAASVDPAHAGAQYNLGLVLQRAGRLGEARTAYARALRR 103
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
+P + +A NN+G + G A A+ + L + P ++ N L +G D+
Sbjct: 104 DPAHVKAQNNIGNVLAGLGRFDQAEAAHRKTLALRPGDADSWSN--LGHALREQGRHDEA 161
Query: 156 FEAHR 160
A R
Sbjct: 162 LAAWR 166
>gi|443326054|ref|ZP_21054721.1| TIGR03032 family protein [Xenococcus sp. PCC 7305]
gi|442794327|gb|ELS03747.1| TIGR03032 family protein [Xenococcus sp. PCC 7305]
Length = 1299
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 157/587 (26%), Positives = 266/587 (45%), Gaps = 56/587 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + A + Y+ A N + A+A +NL I + +NL+KA + AL IK
Sbjct: 719 NLGTLLQNQGQIAEAKLCYQNAIAHNNNFAQAISNLASIDQLEENLEKAKNGFYRALQIK 778
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ + NL ++ Q ++ A E EK IA P + EAY +LG ++ A+
Sbjct: 779 PDYVPAHFNLANIFKEQKRLGGAIEHFEKVIALQPDHTEAYISLGNIFEYQDKQEKALAC 838
Query: 123 YEQCLKIDPD----SRNAGQNRLLAMNYIN-EGHDDKLFEA------------------- 158
Y++ L+++PD + N +L + N+ N E + ++L +
Sbjct: 839 YQKALELNPDFTHLNFNIAMVKLRSCNWHNYERNLEQLLQTLENYLEQDSFPGVNIFALS 898
Query: 159 --------HRDWGK-------RFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
H+ K + L Q ++ + + + L IG++SPD+ H+V
Sbjct: 899 AIPVPLHIHQAAAKSQAKTIAKTSNLLPQKINFQHHHNQPQKLRIGFISPDFREHAVGRL 958
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
I+ + D Y++ YS V D T + V ++ ++ + A + D
Sbjct: 959 IQNIFPHFDRDRYEIYAYSTVDVNDHIT----QAVRSGCDVFVELAPLSAIAAAQRIHSD 1014
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
I I+++L G+T + ++ QPAPVQ W+GYP+T G + Y + D E +
Sbjct: 1015 GIHIMIDLAGYTIGHGAAILDLQPAPVQAQWLGYPDTMGAEFMQYYLGDRTLITDEIAEH 1074
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTP--ALTNGFITFGSFNNLAKITPKVLQVWARIL 381
+ EE+I LP F+ +P + V L + F SFN KI P++ W RIL
Sbjct: 1075 YTEEIIYLPHTFVA-SPLKISERVMTREEFGLPDDAFVFCSFNAHYKINPELFDAWLRIL 1133
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
VP S L + S R + ++ GL + R+ + + + +++ Y+L D+
Sbjct: 1134 EQVPQSVLWL-----ASGSGRDNLRAEAKKRGLAADRL-IFAEKIPHEEYLARYALADLY 1187
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDT Y +T L+ G+P +T G+ +A +G S+ GL+ I + +EY Q A+
Sbjct: 1188 LDTLIYNAGSTAAAVLWSGLPMLTCPGNTNASRMGASICLAGGLETAICNSLEEYEQKAV 1247
Query: 502 QLASDVTALA----NLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
LA+ LA NL+ +L D S P+ +F LE+ MW
Sbjct: 1248 YLATHPQELAQIRQNLQATLTDETSYPPLFRVTDFVRSLEAACEQMW 1294
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 60/113 (53%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A P A NNLG + +++ + +A CYQ A++ NF+Q+++NL + ++ ++
Sbjct: 706 AITLKPDFWGAYNNLGTLLQNQGQIAEAKLCYQNAIAHNNNFAQAISNLASIDQLEENLE 765
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
A +A+ P Y A+ NL ++++ + AI+ +E+ + + PD A
Sbjct: 766 KAKNGFYRALQIKPDYVPAHFNLANIFKEQKRLGGAIEHFEKVIALQPDHTEA 818
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
+L++A C + A+++KP+F + NNLG + QG++ A + AIA N +A+A +NL
Sbjct: 695 SLEEAEVCLRKAITLKPDFWGAYNNLGTLLQNQGQIAEAKLCYQNAIAHNNNFAQAISNL 754
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPD 132
+ + ++ A + + + L+I PD
Sbjct: 755 ASIDQLEENLEKAKNGFYRALQIKPD 780
>gi|330823109|ref|YP_004386412.1| hypothetical protein Alide2_0477 [Alicycliphilus denitrificans
K601]
gi|329308481|gb|AEB82896.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
denitrificans K601]
Length = 734
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 162/591 (27%), Positives = 265/591 (44%), Gaps = 52/591 (8%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG + + A+ + P A+A NN G +L +AV + AL++
Sbjct: 152 FNLGCLHLRRKAYGEAVACMDRVLALEPRLAQAHNNRGNALLKSRHLLEAVASFDQALAL 211
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P ++ +L N G + + A +++AI NP A++ +G L RD+ A+
Sbjct: 212 QPQYADALVNRGNARLQRKEHAQAFADLDRAIRLNPDQAQSRQLMGTLLRDSKRHEEALQ 271
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-----DKLFEA--HRDWG----------- 163
+++ + +P + L A + + H+ D+L +A R G
Sbjct: 272 EFQRAWRCNPGQPGLLTDILGAKTAVCDWHNIGAGIDRLGQAVAQRQPGVSPFSVAVLCD 331
Query: 164 --KRFMRLYSQYTSWDNTKDPERPLV-------------IGYVSPDYFTHSVSYFIEAPL 208
++ + + D PE PL+ +GY S D+ H+ + +
Sbjct: 332 DPALQLQAARNFVAADY---PENPLLGPVAPRADGGRIRVGYYSADFHHHATAILMAELF 388
Query: 209 VYHDYQNYKVVVYS-AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
HD + ++ +S DA +R R+ + D+ ++ VA + RE IDI
Sbjct: 389 ELHDRERFEWFAFSFGPDSQDAMHVRVRQAFDH----FLDVRDRSDEAVARLSRELGIDI 444
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
V+L G T + + G+ + + APVQV+++GYP TTG IDY I D + PP+ + E+
Sbjct: 445 AVDLKGFTQDTRFGIFSYRCAPVQVSYLGYPGTTGADYIDYAIADKVVLPPQARCHFSEK 504
Query: 328 LIRLPECFLCYTPSPE-AGPVCPTPAL---TNGFITFGSFNNLAKITPKVLQVWARILCA 383
++ LP + A AL GF+ F FNN KI P++L W RIL A
Sbjct: 505 VVYLPHSYQVNDSKRRIADRAFTREALGLPATGFV-FCCFNNNYKILPQMLDGWGRILHA 563
Query: 384 VPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
V +S L +++ P +V L + G+ R+ + L+ +H+ + L D+ L
Sbjct: 564 VEDSVLWLLEDNP----AVSRNLLREAQARGIAPQRLVFAQRMPLD-EHLARHRLADLFL 618
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
DT P TT ++L+ G+P +T AG A V SLL VGL L+ + + Y A+
Sbjct: 619 DTLPCNAHTTASDALWAGLPVLTCAGQSFASRVAASLLHAVGLPELVTETQGAYEARAIA 678
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
LA D L LR L SP+ D + FA LE+ Y M R +G P
Sbjct: 679 LARDAGQLDALRSRLHAQAPASPLFDARRFARDLEAAYVVMHARAVQGLPP 729
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 5/163 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN M + ++ Y P +A NLG ++ R +AV C L++
Sbjct: 118 YNRATVLEGMGREQESMDSYRQVLCIEPGHVQAQFNLGCLHLRRKAYGEAVACMDRVLAL 177
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P +Q+ NN G + A ++A+A P YA+A N G + A
Sbjct: 178 EPRLAQAHNNRGNALLKSRHLLEAVASFDQALALQPQYADALVNRGNARLQRKEHAQAFA 237
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEG--HDDKLFEAHRDW 162
++ ++++PD Q+R L + + H++ L E R W
Sbjct: 238 DLDRAIRLNPDQ---AQSRQLMGTLLRDSKRHEEALQEFQRAW 277
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N G A + + A+ +E A P A A N + + ++++ Y+ L I
Sbjct: 84 FNRGNALLRLGRKAEALTAFERAIALAPGLALAHYNRATVLEGMGREQESMDSYRQVLCI 143
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P Q+ NLG ++ + A +++ +A P A+A+NN G + + A+
Sbjct: 144 EPGHVQAQFNLGCLHLRRKAYGEAVACMDRVLALEPRLAQAHNNRGNALLKSRHLLEAVA 203
Query: 122 AYEQCLKIDPDSRNAGQNR 140
+++Q L + P +A NR
Sbjct: 204 SFDQALALQPQYADALVNR 222
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A+ACN G + + + A++ Y A++++ ++ N G G+ A
Sbjct: 43 PDDAQACNTQGNTWLQANRVADAIKAYDRAIALQADYLDPHFNRGNALLRLGRKAEALTA 102
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
E+AIA P A A+ N + G ++D+Y Q L I+P
Sbjct: 103 FERAIALAPGLALAHYNRATVLEGMGREQESMDSYRQVLCIEP 145
>gi|452963367|gb|EME68440.1| O-linked N-acetylglucosamine transferase [Magnetospirillum sp.
SO-1]
Length = 673
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 170/599 (28%), Positives = 249/599 (41%), Gaps = 84/599 (14%)
Query: 15 DMAIVFYEL------------AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
D+A+ Y+L A HFN A + +G + R L+KA+E +
Sbjct: 37 DLALQIYQLWIGLNRDHHLLYAAHFNQ--AVTLSAIGRPEEARTALEKAIE-------LN 87
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEK------AIAANPTY--AEAYNNLGVLYRDAG 114
P+F + NLG V G+ DAA + + +I + A A + + +
Sbjct: 88 PDFYPAYINLGGVMENLGQADAAVDTWNRLATRLGSITGHGIRMKATALKQIARVLEERQ 147
Query: 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN---------EGHD------------- 152
+ A + Q L++D R ++ LLA + EG D
Sbjct: 148 QVVSAEEVLRQSLELDNSQRENAEH-LLASRMVQCRWPVVVPFEGMDHMAQMRNFSPLSL 206
Query: 153 -----DKLFEAHRDW-------GKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSV 200
D L W G+R RL + D +R L IGYVS D H+V
Sbjct: 207 AAYTDDPLLHLASAWEHCCKMFGRRIARLPEVTPA--ERADRQR-LRIGYVSSDLKAHAV 263
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
Y I HD ++ Y + ++++ W DI + ++ A +
Sbjct: 264 GYLIAEVFGLHDRSKVEIFAYYCGPGGEDP---LKQRIRASFDHWTDITTMSDEVAANRI 320
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
R+D IDILV+L GHT + + +PAPV V W+GYP T G P Y I D PP
Sbjct: 321 RDDGIDILVDLNGHTKGARTRLFGMRPAPVNVNWLGYPGTMGTPYHHYVIADEWIIPPGR 380
Query: 321 KQKHVEELIRLPECFLCYTPSPEAGPVCPTP------ALTNGFITFGSFNNLAKITPKVL 374
+ E+++RLP CY + V P L F FN+ KI+ +
Sbjct: 381 EMYCSEKVMRLP----CYQANDRQRAVANQPPSRSEVGLPEDGAVFCCFNSQQKISRLMF 436
Query: 375 QVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQA 434
+ W RIL +VP S L + D V +R E G+ RV + L + DH+
Sbjct: 437 ERWMRILHSVPGSVLWLLE---ANDEVHNRLWEKAEACGIGRNRV-IFGRRLPSPDHLAR 492
Query: 435 YSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNED 494
+L D+ LDTFPY TT ++L+M VP +T++G A VG SLL GL L+ D
Sbjct: 493 MTLADLFLDTFPYGAHTTASDALWMSVPILTLSGRSFASRVGGSLLRSAGLPELVCSTPD 552
Query: 495 EYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
EYV+ A+ L +D L R LR + + D LE Y MW + G +P
Sbjct: 553 EYVETAIALGNDRPRLLAYREQLRAAKPNAVMFDTNLLVSRLEGLYAEMWADFMAGRLP 611
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 47 NLDKAVECYQMALSIKPN---FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY 103
N D A++ YQ+ + + + + N V + G+ + A +EKAI NP + AY
Sbjct: 35 NTDLALQIYQLWIGLNRDHHLLYAAHFNQAVTLSAIGRPEEARTALEKAIELNPDFYPAY 94
Query: 104 NNLGVLYRDAGSISLAIDAYEQ 125
NLG + + G A+D + +
Sbjct: 95 INLGGVMENLGQADAAVDTWNR 116
>gi|194335763|ref|YP_002017557.1| hypothetical protein Ppha_0641 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308240|gb|ACF42940.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 1094
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 155/589 (26%), Positives = 267/589 (45%), Gaps = 62/589 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A E+ +++ A+ +E A NP A A NLG + + +AV Y A+++K
Sbjct: 233 NRGIALQELKRYEEAVFSFEKACAINPDYAIAYANLGNVLQYLKRYGEAVLSYDKAIALK 292
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ ++ GV + A ++A+ P YAEA N GV+ + A+ +
Sbjct: 293 PDYAEAHSDRGVALQGLQLYEEALLSYDRALLVRPDYAEACYNRGVVLQKLKRHVEALAS 352
Query: 123 YEQC--LKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS--------- 171
YEQ LK D D + + +N + D + FE + F ++
Sbjct: 353 YEQALALKPDYDFLSG-----MCLNIKMQMCDWRDFECQ--LSRLFQKIERSEKVAVPFS 405
Query: 172 --------------------------QYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIE 205
Q S + + + IGY S D+ H+ +Y +
Sbjct: 406 FLSISDSLLLQKKVAMISVGESCFSPQVPSAISKRSRHEKIRIGYYSADFHDHATAYLMA 465
Query: 206 APLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKI 265
HD +++ +S + + R++V + D+ + ++ R+ +I
Sbjct: 466 ELFERHDRSQFELFAFSF---GPDRQDKMRKRVAAAFDHFFDVRTRSDAEIVLFSRDLEI 522
Query: 266 DILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHV 325
DI ++L G T + G+ A + AP+QV+++GYP T G+ IDY I DS+ P +++ +
Sbjct: 523 DIAIDLKGFTQGFRRGIFALRAAPIQVSYLGYPGTMGVGYIDYLIADSMLIPEGSRKYYT 582
Query: 326 EELIRLPECFLCYTPSPEAGPV------CPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
E+++ LP+ + C P GF+ F FNN KITP W R
Sbjct: 583 EKIVYLPDSYQVNDTKRVIAEKLFTRKECGLP--EQGFV-FACFNNNNKITPATFDGWMR 639
Query: 380 ILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
IL V S L +++ D++R+ + Q G+++ R+ + L +H+ L
Sbjct: 640 ILGQVEGSVLWLLEDNVAAADNLRNEAM----QRGVDAARLVFAKRMPLA-EHLARQRLG 694
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D+ LDTFP TT ++L+ G+P +T+ G A V SLL + L LI ++EY
Sbjct: 695 DLFLDTFPCNAHTTASDALWAGLPLLTLLGESFAGRVAASLLNAMQLPELITSKQEEYEA 754
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
LA++LAS+ L N+R L +P+ D + F +E Y M+ RY
Sbjct: 755 LAIELASNPAKLGNIRRKLEQNRLATPLFDTKRFTRHIEQAYCMMYERY 803
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 75/143 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N GV Y E+ +FD A+ YE A P AEA N GV+ ++ D+AV Y AL+
Sbjct: 97 NQGVVYEELHRFDEALCSYEHALAVKPDYAEASLNRGVMLQELGRFDEAVLSYDHALTND 156
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ ++ + G V + A EKA+A NP YA AY NLG + +D A+ +
Sbjct: 157 ADNARIWFHRGNVLQDLKRYGEAVFSFEKALAINPDYAIAYANLGNVLQDLKRYEEAVLS 216
Query: 123 YEQCLKIDPDSRNAGQNRLLAMN 145
Y++ + ++PDS A NR +A+
Sbjct: 217 YDRAIAVNPDSVRAYVNRGIALQ 239
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG ++ +++ A++ Y+ A NP A N G+ ++ ++AV ++ A +I
Sbjct: 199 NLGNVLQDLKRYEEAVLSYDRAIAVNPDSVRAYVNRGIALQELKRYEEAVFSFEKACAIN 258
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NLG V + A +KAIA P YAEA+++ GV + A+ +
Sbjct: 259 PDYAIAYANLGNVLQYLKRYGEAVLSYDKAIALKPDYAEAHSDRGVALQGLQLYEEALLS 318
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y++ L + PD A NR
Sbjct: 319 YDRALLVRPDYAEACYNR 336
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
++ G ++ ++ A+ +E A NP A A NLG + +D ++AV Y A+++
Sbjct: 164 FHRGNVLQDLKRYGEAVFSFEKALAINPDYAIAYANLGNVLQDLKRYEEAVLSYDRAIAV 223
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P+ ++ N G+ + + A EKA A NP YA AY NLG + + A+
Sbjct: 224 NPDSVRAYVNRGIALQELKRYEEAVFSFEKACAINPDYAIAYANLGNVLQYLKRYGEAVL 283
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMN 145
+Y++ + + PD A +R +A+
Sbjct: 284 SYDKAIALKPDYAEAHSDRGVALQ 307
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A Y +P EA L +I + + ++ + AL I P + +LNN
Sbjct: 39 RLEEAEALYREIVQSDPEHFEALRLLAIIAVQKKRFEDSLVLFDHALKINPRHAATLNNQ 98
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
GVVY + D A E A+A P YAEA N GV+ ++ G A+ +Y+ L D D
Sbjct: 99 GVVYEELHRFDEALCSYEHALAVKPDYAEASLNRGVMLQELGRFDEAVLSYDHALTNDAD 158
Query: 133 S 133
+
Sbjct: 159 N 159
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
L++A Y+ + P ++L L ++ + + + + + + A+ NP +A NN
Sbjct: 39 RLEEAEALYREIVQSDPEHFEALRLLAIIAVQKKRFEDSLVLFDHALKINPRHAATLNNQ 98
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
GV+Y + A+ +YE L + PD A NR
Sbjct: 99 GVVYEELHRFDEALCSYEHALAVKPDYAEASLNR 132
>gi|374291680|ref|YP_005038715.1| hypothetical protein AZOLI_1155 [Azospirillum lipoferum 4B]
gi|357423619|emb|CBS86479.1| protein of unknown function; putative TPR domain [Azospirillum
lipoferum 4B]
Length = 673
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 255/602 (42%), Gaps = 68/602 (11%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N GV + + A+ Y A P A A N GV+ ++ LD+A + AL +
Sbjct: 81 FNWGVTLQALGRSAEAVTAYGEAALLMPRFAPAPCNQGVLLRELGRLDEADAALRRALEL 140
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P + L ++ +G +D A + P AE NL + ++ G A D
Sbjct: 141 DPMLVPARLALAALHRDRGDLDRAIAGFRACLCLRPDLAEGQANLALSLKERGQRGGAKD 200
Query: 122 ------AYEQCLKI---DP-----------------DSRNAGQNRLLAMNYINEGHDDKL 155
+E+ L I DP D A RL+ + + EG ++
Sbjct: 201 DAASVAGFERALCIGLPDPGGVLAQLIQQRRHLCRWDGLEALSVRLVGL--VREGRTRQV 258
Query: 156 FEAHRDW-------GKRFMRLYSQ-YTSWDNTK-DPERP--------LVIGYVSPDYFTH 198
W G R ++ Y +W +P P L IGY+S DY H
Sbjct: 259 HP----WIFLGEGAGPELERACAERYAAWKTRGIEPVFPNRTGRGDRLRIGYLSADYHEH 314
Query: 199 SVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR--DIYGIDEKKV 256
+ + I + HD +++V S D +R R G R D+ + ++
Sbjct: 315 ATAVLIAELVERHDRGRFEIVGCS-YGPDDGGPMRRRLAA----GFDRFLDLSALTDEAA 369
Query: 257 AAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLAD 316
A + IDILV+L GHT + G+ A +PAPVQ W+GYP TTG PTIDY I D +
Sbjct: 370 AQAIHGAGIDILVDLKGHTQGVRPGIAARRPAPVQAQWLGYPGTTGSPTIDYVIADPVVA 429
Query: 317 PPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFITFGSFNNLAKITP 371
P + ++ + E ++ LP+ Y P+ + P P+ L + F +FN KI P
Sbjct: 430 PADHRRFYSERIVHLPD---SYQPNDRKRSIGPVPSRADCGLPADAVVFCAFNAPYKIGP 486
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
++ W RIL VP S L + P V + G+ + R+ P L H
Sbjct: 487 ELFGRWCRILQRVPGSVLWLLEGPA---EVAVNLRRAAAERGIAAERLVFAPR-LPGPAH 542
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
+ + L D+ LD+ P TT ++L+ G+P +T+ G A V SLL VGL
Sbjct: 543 LARHRLADLFLDSSPVGAHTTASDALWAGLPVLTVPGHSFAGRVAASLLHAVGLPESAVP 602
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
+ D Y A +LA LA L+ L + + +P+ D FA +E+ Y MW + G
Sbjct: 603 DWDAYEATAQRLAERPAELAGLKRRLEEGRATAPLFDTDRFARSIEAAYLAMWEIHAAGG 662
Query: 552 VP 553
P
Sbjct: 663 PP 664
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P A A +N G + + L +A ++ AL+ P+F + N GV G+ A
Sbjct: 39 TPEEAVARSNFGEALRRQGRLAEAEAHHRKALAWLPDFGGNHFNWGVTLQALGRSAEAVT 98
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+A P +A A N GVL R+ G + A A + L++DP
Sbjct: 99 AYGEAALLMPRFAPAPCNQGVLLRELGRLDEADAALRRALELDP 142
>gi|410692351|ref|YP_003622972.1| putative UDP-N-ACETYLGLUCOSAMINE--PEPTIDE
N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT [Thiomonas sp.
3As]
gi|294338775|emb|CAZ87109.1| putative UDP-N-ACETYLGLUCOSAMINE--PEPTIDE
N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT [Thiomonas sp.
3As]
Length = 753
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 157/594 (26%), Positives = 260/594 (43%), Gaps = 56/594 (9%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+NL A G + A+ YE A P A+A L + + A+ YQ+A S
Sbjct: 157 FFNLAEAQGLAGELAEAVKNYEQALRLQPGHAQARFGLAQVLRQLQGWAAALPHYQLAAS 216
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P+ + + G + A E+ + P AEA+ +G + + AI
Sbjct: 217 MAPDAPMGQYFWALALHMGGHVQQAVELYTRITERWPDMAEAWVGIGSVQFGMNRLREAI 276
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR---------DWG-----KRF 166
AYEQ L + P++ NA + A + DD R D G + F
Sbjct: 277 AAYEQALTLQPENANALDGLVEARRKACDWRDDMAALEQRLHALARRGLDAGLPAPVRIF 336
Query: 167 MRLYSQYTS----------------------WDNTKDPERPLVIGYVSPDYFTHSVSYFI 204
LY+ + + W+ + L IGY+ D H ++ +
Sbjct: 337 TALYTPFDALELKAIAQSNALQSKPADCAPRWNEAARRDGRLRIGYLLADARDHPNAHNM 396
Query: 205 EAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDK 264
+ HD ++V YS + D +++ +R+++ ++ + ++ G ++++A +R+D
Sbjct: 397 LSVFGLHDRARFEVFTYSWGL--DDQSV-YRKRIREESEHFVELRGASDEEMARRIRDDG 453
Query: 265 IDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH 324
+ +LV+L GHTA+N+LG++ +PAPVQ+ ++G+P T+G +D+ + D PP + +
Sbjct: 454 VQVLVDLMGHTADNRLGVLWRKPAPVQMNYLGFPGTSGAECMDFVLVDRWVCPPGQEAEM 513
Query: 325 VEELIRLPECF--LCY-----TPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
E +IRLP C+ L + P P A P GF+ F FNN KI+ +V W
Sbjct: 514 SEAVIRLPYCYNPLAHHAEMQVPPPPAREQAGLP--PQGFV-FCCFNNTNKISAEVFARW 570
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
RIL P S L + D V LG+E R+ P L HM L
Sbjct: 571 MRILQRTPGSVLWLY---RTHDLVDENLRRAAAALGVEPQRLVFAP-HLPREWHMARLQL 626
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
D+ LDT PY TTT ++L GVP +T+ G A V S+L L I + Y
Sbjct: 627 ADLFLDTTPYGAHTTTGDALRAGVPVLTVPGQTFASRVAASMLDAARLPECIQPDWPAYE 686
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
+ A++L + A R+ +++ P+ D LE Y W ++ +G+
Sbjct: 687 EEAVRLCAQGMAELKARLKSPEVL---PLFDTPRQVRDLERAYSQAWQQFVEGE 737
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A Y A P +A + LGV +A + A++ +P N+LG +
Sbjct: 71 AAALYRSALQLQPDLTDAQHLLGVALGQSGEYAEAERLVRQAIAAQPAQGAYWNSLGRLL 130
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
+QG+M A + +++A+ +P AE++ NL AG ++ A+ YEQ L++ P A
Sbjct: 131 LLQGRMPEAVQALQEALQLSPQNAESFFNLAEAQGLAGELAEAVKNYEQALRLQPGHAQA 190
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGVA G+ ++ A A P N+LG + + + +AV+ Q AL + P
Sbjct: 92 LGVALGQSGEYAEAERLVRQAIAAQPAQGAYWNSLGRLLLLQGRMPEAVQALQEALQLSP 151
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
++S NL + G++ A + E+A+ P +A+A L + R + A+ Y
Sbjct: 152 QNAESFFNLAEAQGLAGELAEAVKNYEQALRLQPGHAQARFGLAQVLRQLQGWAAALPHY 211
Query: 124 EQCLKIDPDS 133
+ + PD+
Sbjct: 212 QLAASMAPDA 221
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98
V + + +A Y+ AL ++P+ + + + LGV G+ A ++ +AIAA P
Sbjct: 59 AVPLHQQGRVGEAAALYRSALQLQPDLTDAQHLLGVALGQSGEYAEAERLVRQAIAAQPA 118
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+N+LG L G + A+ A ++ L++ P +
Sbjct: 119 QGAYWNSLGRLLLLQGRMPEAVQALQEALQLSPQN 153
>gi|345869369|ref|ZP_08821327.1| Tetratricopeptide TPR_2 repeat-containing protein [Thiorhodococcus
drewsii AZ1]
gi|343923292|gb|EGV33984.1| Tetratricopeptide TPR_2 repeat-containing protein [Thiorhodococcus
drewsii AZ1]
Length = 844
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 169/602 (28%), Positives = 260/602 (43%), Gaps = 62/602 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LGVA + + +E A NP E NN + L A + MAL +K
Sbjct: 244 HLGVAAVRLGDEALTRYAFEQALLLNPLRPETWNNAADTAMRQGWLGAAYQYAFMALQLK 303
Query: 63 PNFSQSLNNL-----------GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYR 111
P+ QS+ L G V + +G + A ++++ + + E L + R
Sbjct: 304 PDLIQSVFCLLQAAYKIEVEAGSVDSDRGLLARATRLVKRGVGTSQQALEVSELLSQIGR 363
Query: 112 DAGSISLAIDAYEQCLKIDPDSRNA---GQNRLLAMNYINEGHD---DKLFEAH------ 159
+ L + E+ +P + Q R+ + E D+L ++
Sbjct: 364 YPDACELLESSLERFGDHEPATLGRLVINQRRVCDWRALPERQARLVDRLRQSDLPVVSP 423
Query: 160 -----------RDWGKRFMRLYSQYTSWDNTKDPERP---------LVIGYVSPDYFTHS 199
D K S++ W+N RP L IGY+S D+ H+
Sbjct: 424 FAAMSLPGLSPEDLRKTARWRASRFQKWENQAANLRPGPTKATAARLRIGYLSDDFQDHA 483
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM 259
+Y + HD ++ YS AD R ++ + DI + + A
Sbjct: 484 TAYLTASVFERHDRSRFECFAYS--TGADDGGF-MRRRLSDAFEHFVDIRSLGHLEAAQR 540
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE 319
+R+D IDILV+L G+T+N +L ++A +PAP+QVTW+G+P T G IDY I D + PPE
Sbjct: 541 IRDDGIDILVDLKGYTSNARLEILALRPAPIQVTWLGFPGTLGTSFIDYMIVDPVVVPPE 600
Query: 320 TKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT------NGFITFGSFNNLAKITPKV 373
+ E+L +P Y P E V P+ T GF+ F FN+ KIT ++
Sbjct: 601 RAACYDEKLAYMPG---AYAPVDERRLVADRPSRTEAGLPEQGFV-FCCFNDPYKITSEI 656
Query: 374 LQVWARILCAVPNSRLVVKCKP-FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
+ W IL AVP S L + K D++R E+ GL+S R+ + +H+
Sbjct: 657 FERWCAILNAVPGSVLWLYAKTRVVADNLRRE----AERRGLDSERLYFASKV-SQPEHL 711
Query: 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKN 492
+L D+ LDT PY TT ++L++GVP +T G V SLL GL LI +
Sbjct: 712 ARLALADLVLDTLPYNAHTTASDALWVGVPVLTCQGETFPSRVAASLLRAAGLPELITGD 771
Query: 493 EDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDV 552
Y A+ LA + L+ L+ L + + D FA LE+ YR M R +G
Sbjct: 772 LAGYEARAVALAKEAGTLSALKSRLAEARRTAIFFDSARFAADLETLYREMRERQIRGLP 831
Query: 553 PS 554
PS
Sbjct: 832 PS 833
>gi|319761242|ref|YP_004125179.1| tetratricopeptide tpr_1 repeat-containing protein [Alicycliphilus
denitrificans BC]
gi|317115803|gb|ADU98291.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
denitrificans BC]
Length = 734
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 162/591 (27%), Positives = 264/591 (44%), Gaps = 52/591 (8%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG + + A+ + P A+A NN G +L +AV + AL++
Sbjct: 152 FNLGCLHLRRKAYGEAVACMDRVLALEPRLAQAHNNRGNALLKSRHLLEAVASFDQALAL 211
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P ++ +L N G + + A +++AI NP A++ +G L RD+ A+
Sbjct: 212 QPQYADALVNRGNARLQRKEHAQAFADLDRAIRLNPDQAQSRQLMGTLLRDSKRHEEALQ 271
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-----DKLFEA--HRDWG----------- 163
+++ + +P + L A + + H+ D+L +A R G
Sbjct: 272 EFQRAWRCNPGQPGLLTDILGAKTAVCDWHNIGAGIDRLGQAVAQRQPGVSPFSVAVLCD 331
Query: 164 --KRFMRLYSQYTSWDNTKDPERPLV-------------IGYVSPDYFTHSVSYFIEAPL 208
++ + + D PE PL+ +GY S D+ H+ + +
Sbjct: 332 DPALQLQAARNFVAADY---PENPLLGPVAPRADGGRIRVGYYSADFHHHATAILMAELF 388
Query: 209 VYHDYQNYKVVVYS-AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
HD + ++ +S DA R R+ + D+ ++ VA + RE IDI
Sbjct: 389 ELHDRERFEWFAFSFGPDSQDAMHARVRQAFDH----FLDVRDRSDEAVARLSRELGIDI 444
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
V+L G T + + G+ + + APVQV+++GYP TTG IDY I D + PP+ + E+
Sbjct: 445 AVDLKGFTQDTRFGIFSYRCAPVQVSYLGYPGTTGADYIDYAIADKVVLPPQARCHFSEK 504
Query: 328 LIRLPECFLCYTPSPE-AGPVCPTPAL---TNGFITFGSFNNLAKITPKVLQVWARILCA 383
++ LP + A AL GF+ F FNN KI P++L W RIL A
Sbjct: 505 VVYLPHSYQVNDSKRRIADRAFTREALGLPATGFV-FCCFNNNYKILPQMLDGWGRILHA 563
Query: 384 VPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
V +S L +++ P +V L + G+ R+ + L+ +H+ + L D+ L
Sbjct: 564 VEDSVLWLLEDNP----AVSRNLLREAQARGIAPQRLVFAQRMPLD-EHLARHRLADLFL 618
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
DT P TT ++L+ G+P +T AG A V SLL VGL L+ + + Y A+
Sbjct: 619 DTLPCNAHTTASDALWAGLPVLTCAGQSFASRVAASLLHAVGLPELVTETQGAYEARAIA 678
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
LA D L LR L SP+ D + FA LE+ Y M R +G P
Sbjct: 679 LARDAGQLDALRSRLHAQAPASPLFDARRFARDLEAAYVVMHARAVQGLPP 729
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 5/163 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YN M + ++ Y P +A NLG ++ R +AV C L++
Sbjct: 118 YNRATVLEGMGREQESMDSYRQVLCIEPGHVQAQFNLGCLHLRRKAYGEAVACMDRVLAL 177
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P +Q+ NN G + A ++A+A P YA+A N G + A
Sbjct: 178 EPRLAQAHNNRGNALLKSRHLLEAVASFDQALALQPQYADALVNRGNARLQRKEHAQAFA 237
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEG--HDDKLFEAHRDW 162
++ ++++PD Q+R L + + H++ L E R W
Sbjct: 238 DLDRAIRLNPDQ---AQSRQLMGTLLRDSKRHEEALQEFQRAW 277
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N G A + + A+ +E A P A A N + + ++++ Y+ L I
Sbjct: 84 FNRGNALLRLGRKAEALTAFERAIALAPGLALAHYNRATVLEGMGREQESMDSYRQVLCI 143
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P Q+ NLG ++ + A +++ +A P A+A+NN G + + A+
Sbjct: 144 EPGHVQAQFNLGCLHLRRKAYGEAVACMDRVLALEPRLAQAHNNRGNALLKSRHLLEAVA 203
Query: 122 AYEQCLKIDPDSRNAGQNR 140
+++Q L + P +A NR
Sbjct: 204 SFDQALALQPQYADALVNR 222
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A+ACN G + + + A++ Y A++++ ++ N G G+ A
Sbjct: 43 PDDAQACNTQGNTWLQANRVADAIKAYDRAIALQADYLDPHFNRGNALLRLGRKAEALTA 102
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
E+AIA P A A+ N + G ++D+Y Q L I+P
Sbjct: 103 FERAIALAPGLALAHYNRATVLEGMGREQESMDSYRQVLCIEP 145
>gi|154244408|ref|YP_001415366.1| hypothetical protein Xaut_0451 [Xanthobacter autotrophicus Py2]
gi|154158493|gb|ABS65709.1| Tetratricopeptide TPR_2 repeat protein [Xanthobacter autotrophicus
Py2]
Length = 574
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 250/554 (45%), Gaps = 52/554 (9%)
Query: 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98
G ++ R ++A Y+ L P+ + ++ LG+V Q + A E+ +K +A P
Sbjct: 23 GYQHQLRGQYEEAARHYRKILRAAPDQADVMHLLGIVRARQSREIEAIELYKKVLARRPD 82
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN---YINEGHDDKL 155
A+A++NL + Y ++ A E+ +DP S N LL + GHD +L
Sbjct: 83 DAKAWHNLSLAYGALNKSDESLAAIERAFDLDP-SLPLSANLLLPHRRAIWDWRGHD-RL 140
Query: 156 FEAHRDWGKR-------FMRLY---------SQYTSWDNTKDPERP-------------- 185
FE + F LY S + P RP
Sbjct: 141 FENLKRGVSEPNVPALPFAALYVDDPALHLASARRKVAEEQTPARPRTFDHSARRTASGP 200
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
+ + Y+S D+ TH+ ++ I L HD ++V S V DA R++++ +
Sbjct: 201 IRVAYLSADFRTHATTFLISKLLARHDRSRFEVTAIS-VSYNDASE--HRQRIIDAVDHF 257
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
D +A V ID+ V+L GHT+ +L A +PAPVQV+++GYP T+G P
Sbjct: 258 LDREKATPAAIAEEVAALGIDVFVDLMGHTSGERLAAFAERPAPVQVSYLGYPGTSGAPF 317
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITF 360
+DY I D + P + E+++ LP+C Y P+ PV P L + F
Sbjct: 318 MDYVIADPVVLPFADAAFYTEKIVHLPDC---YQPNDPDLPVGERPTRADCGLPDDAFVF 374
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
+FN+ K+ P+V + RIL AVP S L V++ + D++R E GL+ R+
Sbjct: 375 CAFNSAWKLDPEVFSAYTRILKAVPGSVLWVLESRENSADNLRRE----AEARGLDPARL 430
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
P++ L DH L D+ LDTFPY TT + L MG+P VT G A V S+
Sbjct: 431 VFAPMVPLK-DHFARLPLADLFLDTFPYTAHTTASDMLRMGLPMVTRTGRSFASRVAASI 489
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+T++ L I + + +V A+ +A+D ALA R L SP+ D A +E
Sbjct: 490 MTQMDLADFITTDVEGFVAKAVAIANDPAALAQARARLAAARPTSPLFDIDRHARHMERA 549
Query: 540 YRNMWHRYCKGDVP 553
+ M R G P
Sbjct: 550 FETMVARARAGLPP 563
>gi|313896085|ref|ZP_07829639.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975510|gb|EFR40971.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 483
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 193/371 (52%), Gaps = 22/371 (5%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IG+++P + S S F A L+ + Y + YS +ADA T V +
Sbjct: 127 LRIGFIAPHFLDSSSSLFY-AGLMRGLREKYDIYAYSLSDRADAFTESLCADVR-----Y 180
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANN-KLGMMACQPAPVQVTWIGYPNTTGLP 304
+ I ++ A +R D+ID+LV+L GHT L ++A PAPVQ++ IG+ TTG+
Sbjct: 181 ASLENISIEEQAECIRTDEIDVLVDLGGHTEGGMTLMVLARCPAPVQISGIGWFATTGVS 240
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPE--AGPVCPTPALTNGFITFGS 362
+D +TD + P T++ + EEL+RLP F+ TP+ E A V PA + +TFG
Sbjct: 241 FVDGFLTDEVLSPAGTEEFYSEELLRLPHAFVM-TPTAEMRAAKVSARPA--DEPVTFGV 297
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH--RFLSTLEQLGLESLRVD 420
N KI VL+VW RIL VP SRLV++ D+V R + LE L + +
Sbjct: 298 LQNFMKINEAVLKVWERILKKVPKSRLVLQ------DAVDSPLRVTTILEMLDGMKMSMK 351
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ + D++ Y +DI+LDTFPYAG +T +LYMGVP V++ G HA +G S+L
Sbjct: 352 RIFVRRGKQDYLADYGDIDIALDTFPYAGGASTATALYMGVPVVSLRGETHAARLGASIL 411
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T G I +E Y Q+A+ LA + + R +LR + SP+ D + E
Sbjct: 412 TAAGHTEWIGADERAYEQIAVDLAGRIGEVRAGRAALRAQVETSPLMDEAAYLRAAEEAI 471
Query: 541 RNMWHRYCKGD 551
+W +GD
Sbjct: 472 ARIWAE--RGD 480
>gi|407784369|ref|ZP_11131523.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
protein, partial [Oceanibaculum indicum P24]
gi|407197037|gb|EKE67162.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
protein, partial [Oceanibaculum indicum P24]
Length = 315
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 164/292 (56%), Gaps = 12/292 (4%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
N + P R L +G+VSPD+ H+ ++ A +HD + +++ YS V + D T +FR
Sbjct: 32 NDRTPGRRLRVGFVSPDFRRHTSRFYFSALFEHHDREAIELIGYSNVQQPDEWTEKFRGW 91
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
WR+I G+ + +VA VR D IDIL++ H +++LG+ A +PAPVQ TW+G
Sbjct: 92 ADG----WREIRGLSDTEVAEQVRADGIDILIDGCNHMQDHRLGVFALKPAPVQATWLGA 147
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP-VCPTPALTNG 356
TTGL +DY + D P T + E ++RLP CF+ Y P PE P V P PA +G
Sbjct: 148 AWTTGLSAVDYVLFDPYMAPEGTLAR--EAIVRLPGCFIAYRP-PEGTPEVAPLPAQRSG 204
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+TFG ++ +V + W IL +P +RLV+ + F + + + L Q G++
Sbjct: 205 QVTFGYSGRTERLNHRVFRAWGEILSRLPEARLVLDFRAFADPKTQAYYRAVLGQYGVDV 264
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
RV++ + D + + +DI LD FP++G T ++L+MGVP +T+AG
Sbjct: 265 SRVEM----RCSADIFKGLADIDILLDCFPHSGGTMLFDALWMGVPALTLAG 312
>gi|117926636|ref|YP_867253.1| hypothetical protein Mmc1_3361 [Magnetococcus marinus MC-1]
gi|117610392|gb|ABK45847.1| TPR repeat-containing protein [Magnetococcus marinus MC-1]
Length = 750
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 152/542 (28%), Positives = 238/542 (43%), Gaps = 44/542 (8%)
Query: 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA 92
EA N L +Y D+ + +A+ YQ A+ ++P+ + NLG VY +Q AA+ A
Sbjct: 212 EAHNQLANLYTDQRHFAQAIHHYQAAIELRPSVAMFHYNLGYVYLLQNDHATAAQHYSNA 271
Query: 93 IAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
+P A S+ + C ++ AG LL
Sbjct: 272 YRLDPQLGGALG------------SMILCDMMLCRWDRLEAHIAGVKALLGGERAQHAPP 319
Query: 153 DKLF----------EAHRDWGKRFMRL-------YSQYTSWDNTKDPERPLVIGYVSPDY 195
F R G +F +L + + PL IGY+S D+
Sbjct: 320 LVPFITTYLPQIGAALQRQAGAQFTQLSFGAIMAQPPLAAAHRPRATGSPLRIGYLSADF 379
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H++S L HD + + + ++ D R++V + + I +D+
Sbjct: 380 RNHAISRLAIGVLEGHDRRQFTLTAFAIGPDTDDA---MRQRVKQAVHHFHLIGHLDDAA 436
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI-DYRITDSL 314
A + +IDILV++ G+T + + G++A +PAPVQV+W+GYP G + DY + D +
Sbjct: 437 AARFIAAQEIDILVDMMGYTTHARPGILAHRPAPVQVSWLGYPGGMGDRRLADYLVGDPI 496
Query: 315 ADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFITFGSFNNLAKI 369
P H E L +P C Y P+P PTP+ L + FGSFN KI
Sbjct: 497 NTPAHEAHLHAEWLAIMPHC---YQPNPRTLACDPTPSRQEAGLPPQGVVFGSFNQSYKI 553
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429
TP+++ +W+R+L AV + L + P +V H + G+ RV P + +
Sbjct: 554 TPQIVALWSRLLHAVEHGVLWL-LDPDLPAAVEH-LQAHFAAHGIAKQRVIFAPRLSMA- 610
Query: 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLI 489
HM L+D++LDTFPY TT ++L+ GVP V G A V L +G++ L+
Sbjct: 611 AHMGRLPLVDVALDTFPYTSHTTASDALWSGVPLVAWRGETFASRVSTCLAINMGMQELV 670
Query: 490 AKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
++ + Y+ LA LA D A LR LR +P+ D F LE Y+ MW +
Sbjct: 671 VEDGEHYLALAQALAHDPQRRAALRDRLRQTREHAPLYDAPLFTTHLEHLYQQMWRNHSH 730
Query: 550 GD 551
G
Sbjct: 731 GQ 732
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 64/164 (39%), Gaps = 38/164 (23%)
Query: 6 VAYGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
V GE+L + A + A FNPH A + LG + + L A++CYQ A+++
Sbjct: 79 VGLGELLEEAQRLPEAHTAFRTALGFNPHLGSAHHGLGRLLEGAGELQAALQCYQQAVTL 138
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY---------------------- 99
+ + + LG ++ G+ A + + ++ +P +
Sbjct: 139 EGGLNSARFRLGRLWQRLGEPQQAKQAFAEILSQHPHFYLARLHLAECQQRLGEAQQAEQ 198
Query: 100 ------------AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
EA+N L LY D + AI Y+ +++ P
Sbjct: 199 NYLLVIQQQASLPEAHNQLANLYTDQRHFAQAIHHYQAAIELRP 242
>gi|357162940|ref|XP_003579571.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 983
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 162/607 (26%), Positives = 255/607 (42%), Gaps = 61/607 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A FY+ A NNL VIYK + + A+ CY L
Sbjct: 368 LTNLGNIYMEWNMASAAASFYKAAIAVTSGLTSPFNNLAVIYKQQGSYADAIACYTEVLR 427
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + +L N G + G++ A + +A PT AEA+ NL Y+D+G+ AI
Sbjct: 428 IDPTAADALVNRGNTFKEFGRVAEAIQDYMQAATIMPTMAEAHANLASAYKDSGNQESAI 487
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR--FMRLYSQYTSWD 177
+Y++ L + PD N L + + + + + +F + KR M L +
Sbjct: 488 TSYKKALCLRPDFPEVTCNLLHTLQSVCDWENRETMFHEVEEIIKRQIKMSLLPSVQPFH 547
Query: 178 NTKDPERPLVIGYVSPDYFTH------------------------------SVSY----F 203
P P++ +S Y V Y F
Sbjct: 548 AIAYPIDPMLALEISRKYAVQCSLIASRFGLPPFVHPPPLPVRAQGKHGRLRVGYVSSDF 607
Query: 204 IEAPLVY--------HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
PL + HD NY V A+ + D +R+++ + + D+ +
Sbjct: 608 GNHPLSHLMGSVFGMHD-GNYVEVFCYALSQNDG--TEWRQRIQAEAEHFIDVSAMTSDV 664
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A M+ EDKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 665 IAKMINEDKIQILINLNGYTKGARNEIFALQPAPIQVSYMGFPGTTGASYIDYLVTDEFV 724
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPEA----GPVCPTPALTNGF----ITFGSFNNLA 367
P + E+L+ LP C+ + P+CP G F FN L
Sbjct: 725 SPTRYAHIYSEKLVHLPHCYFVNDYKQKNRDVFSPLCPHKRSDYGLPEDKFIFACFNQLY 784
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P++ W I+ VPNS L + P + R + G+ ++ + + +
Sbjct: 785 KMDPEIFDTWCNIVKRVPNSVLWLLRFP---ATGEMRVKAHAAARGVSPDQI-IFTDVAV 840
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-K 486
H+H++ L D+ LDT TT + L+ G+P +T+A A V SL GL
Sbjct: 841 KHEHIRRSELADLFLDTPLCNAHTTGTDILWAGLPMITLALEKMATRVAGSLCLATGLGD 900
Query: 487 HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+I + EY A++LA++ L L L+ P+ D + L+ Y MW+
Sbjct: 901 EMIVSSTKEYEDRAVELATNPAELRILTNKLKQARLTCPLFDTARWVRNLDRAYFKMWNL 960
Query: 547 YCKGDVP 553
YC G P
Sbjct: 961 YCSGRHP 967
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 73/138 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + DM+I Y A +P EA NN+G KD +++A+ C+Q L ++
Sbjct: 302 NLATIYYEQRQLDMSIHCYSQAILCDPRFVEAHNNMGNALKDAGRVEEAINCFQSCLILQ 361
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y AAA + AIA +NNL V+Y+ GS + AI
Sbjct: 362 ANHPQALTNLGNIYMEWNMASAAASFYKAAIAVTSGLTSPFNNLAVIYKQQGSYADAIAC 421
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + +A NR
Sbjct: 422 YTEVLRIDPTAADALVNR 439
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E+ + A+ +Y+ A NP A+A N G +YK L++A+ CYQ AL +
Sbjct: 234 NLAGLFMEVGDLNKAMQYYKEAVKLNPSFADAHLNQGNVYKAMGMLEEAIACYQRALQAR 293
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NL +Y Q ++D + +AI +P + EA+NN+G +DAG + AI+
Sbjct: 294 PDYAMAYGNLATIYYEQRQLDMSIHCYSQAILCDPRFVEAHNNMGNALKDAGRVEEAINC 353
Query: 123 YEQCLKIDPDSRNAGQN 139
++ CL + + A N
Sbjct: 354 FQSCLILQANHPQALTN 370
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 70/128 (54%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +D+ I E A +P AE N+ +K++ ++D A+ Y A+ I+
Sbjct: 99 LGAIYFQLRDYDLCISKNEEALAVDPGFAECYGNMANAWKEKGDIDLAICYYLTAIKIRS 158
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL YT +G++ AA+ +A+ NP +A++NLG L + G + A Y
Sbjct: 159 NFCDAWSNLASAYTRKGRLHDAAQCCRQALILNPRLVDAHSNLGNLMKAQGFVEEAYTCY 218
Query: 124 EQCLKIDP 131
+ ++IDP
Sbjct: 219 LEAIRIDP 226
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A Y A +PH A A +NL ++ + +L+KA++ Y+ A+ + P+F+ + N G VY
Sbjct: 214 AYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLNPSFADAHLNQGNVY 273
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
G ++ A ++A+ A P YA AY NL +Y + + ++I Y Q + DP A
Sbjct: 274 KAMGMLEEAIACYQRALQARPDYAMAYGNLATIYYEQRQLDMSIHCYSQAILCDPRFVEA 333
Query: 137 GQN 139
N
Sbjct: 334 HNN 336
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + A A NP +A +NLG + K + +++A CY A+ I
Sbjct: 166 NLASAYTRKGRLHDAAQCCRQALILNPRLVDAHSNLGNLMKAQGFVEEAYTCYLEAIRID 225
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NL ++ G ++ A + ++A+ NP++A+A+ N G +Y+ G + AI
Sbjct: 226 PHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLNPSFADAHLNQGNVYKAMGMLEEAIAC 285
Query: 123 YEQCLKIDPD 132
Y++ L+ PD
Sbjct: 286 YQRALQARPD 295
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y A + +A +NL Y + L A +C + AL +
Sbjct: 132 NMANAWKEKGDIDLAICYYLTAIKIRSNFCDAWSNLASAYTRKGRLHDAAQCCRQALILN 191
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG ++ A +AI +P +A A++NL L+ + G ++ A+
Sbjct: 192 PRLVDAHSNLGNLMKAQGFVEEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQY 251
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y++ +K++P +A N+
Sbjct: 252 YKEAVKLNPSFADAHLNQ 269
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 43 KDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA 102
K R L+ A Y+ P + +L LG +Y D E+A+A +P +AE
Sbjct: 74 KYRQALEHAKAVYEK----NPRRTDNLLLLGAIYFQLRDYDLCISKNEEALAVDPGFAEC 129
Query: 103 YNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG--HD 152
Y N+ +++ G I LAI Y +KI + +A N LA Y +G HD
Sbjct: 130 YGNMANAWKEKGDIDLAICYYLTAIKIRSNFCDAWSN--LASAYTRKGRLHD 179
>gi|296448837|ref|ZP_06890677.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
gi|296253657|gb|EFH00844.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
Length = 452
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 184/378 (48%), Gaps = 16/378 (4%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
ER + +GY+S D+ H+ + + L HD + V YS D K +R +++
Sbjct: 82 ERKIRLGYLSNDFHDHATALLLIETLEAHDRGRFCVNAYSYGAD-DGKAMR--RRLVDTF 138
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+ DI + + A + D++DIL++L G T N + G++ +PAP+QV ++GYP T G
Sbjct: 139 DSFTDIAALSDSDAARAIHRDEVDILIDLKGFTFNARSGILMLRPAPLQVNYLGYPGTLG 198
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGF 357
DY ITD P + + E +P Y P AGP+ P L
Sbjct: 199 AELCDYIITDEYVTPRASAADYSESFAYMPNS---YQPRGRAGPIGAKPLRASVGLPEQG 255
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ F FN K+TP++ VW R+L A P S L + P ++R+ + G+
Sbjct: 256 VVFCCFNQAYKLTPEIFDVWCRLLDAAPGSVLWLLAAPMAEGNLRNEAW----KRGVNGN 311
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + DH+ L D+ LDT PY TT ++L+ GVP VT +GS A V
Sbjct: 312 RLVFAP-DMGQGDHLARLQLADLVLDTAPYNAHTTASDALWAGVPIVTCSGSTFASRVAG 370
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S+L VG+ LI ++ D Y LA +LA+D LA +R L + + + D + LE
Sbjct: 371 SVLRAVGMPELITEDLDGYFDLASRLANDPAGLAAVRAKLARNRAGAALFDVPAYTRDLE 430
Query: 538 STYRNMWHRYCKGDVPSL 555
+R+MW R G P+L
Sbjct: 431 GLFRSMWSRRSAGLPPAL 448
>gi|329895776|ref|ZP_08271152.1| TPR repeat-containing protein [gamma proteobacterium IMCC3088]
gi|328922138|gb|EGG29495.1| TPR repeat-containing protein [gamma proteobacterium IMCC3088]
Length = 807
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 155/588 (26%), Positives = 265/588 (45%), Gaps = 49/588 (8%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLGV ++ + + A + + A +P+ A+ NNLG+ L + Y++AL+
Sbjct: 217 LTNLGVVLEQLGEVEDAEICFIKAIRISPNEAKIYNNLGIAQHSLGKLLASESNYRIALT 276
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++P F+++ NLG V GK+ AAE AI P AEA+ NL D G + AI
Sbjct: 277 LEPQFAEANTNLGNVLRRLGKLTEAAESHCTAIKIAPELAEAHYNLATTLEDLGELEGAI 336
Query: 121 DAYEQCLKIDPDSRNA------GQNRLLAMNYINE------GHDDKLFE-------AHRD 161
AY LK+ P A Q + N H D++ + D
Sbjct: 337 AAYRDALKLRPSYLLAEVAMCHQQQHICDFTAWNSFPEISCQHSDEMGRPSPWINLSWID 396
Query: 162 WGKRFMRLYSQYTSWDNTKD----PERP------LVIGYVSPDYFTHSVSYFIEAPLVYH 211
++ + L S Y T+ P++P + +GY S D+ Y + L +H
Sbjct: 397 NPEKQLALSSAYAKLKFTRPIGSLPQKPARRPERIKVGYFSADFHNFPGMYLMAGLLEHH 456
Query: 212 DYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVEL 271
Q++++ +S K R ++ + +I + + V +VR IDI +
Sbjct: 457 SRQHFEIYAFSY---GPPKHDEMRYRIQSAVDHFVEICDLSDNDVVNLVRGYGIDISIHR 513
Query: 272 TGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRL 331
G+T +++ + + +P+Q+ ++GYP + G IDY I D + P ++ + E++I L
Sbjct: 514 NGYTKSSRTELFQYRLSPIQINYLGYPGSLGADFIDYIIADPVVIPENQREHYSEKVIYL 573
Query: 332 PECFLCYTPSPEAGPVCPTPALTNGF------ITFGSFNNLAKITPKVLQVWARILCAVP 385
P Y P+ + + T F FNN KI+P+ +W RIL +
Sbjct: 574 PHS---YQPNDDKREIAQTDTSRADFGLPENAFVLCCFNNNFKISPREFDIWMRILNRLE 630
Query: 386 NSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
+ L ++K + H +Q G++ R+ + L +H+ + D+ +DT
Sbjct: 631 KAVLWLLKTNKW----TEHNLRKEAKQRGIDPSRI-VFAERLPQSEHLARHKHADLFIDT 685
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
F TT ++L+ G+P VT GS A V SLL +GL LI ++EY L L+LA
Sbjct: 686 FNCNAHTTASDALWAGLPVVTKQGSQFAARVSASLLNSIGLPELIVNTQEEYEALILELA 745
Query: 505 SDVTALANLRMSL-RDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
+D L L+ L R+ ++K P+ D + + E R + RY +G+
Sbjct: 746 TDTNRLNALKSKLARNRLTK-PLFDTRQYTRHFEMGLRQAYDRYFEGE 792
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNL V ++ + D A+ ++ A P ++A NLGV+ + ++ A C+ A+ I
Sbjct: 184 YNLAVNLADLKRLDDAVSMFKHALSLKPEFSQALTNLGVVLEQLGEVEDAEICFIKAIRI 243
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PN ++ NNLG+ GK+ A+ A+ P +AEA NLG + R G ++ A +
Sbjct: 244 SPNEAKIYNNLGIAQHSLGKLLASESNYRIALTLEPQFAEANTNLGNVLRRLGKLTEAAE 303
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
++ +KI P+ A N LA + G + A+RD
Sbjct: 304 SHCTAIKIAPELAEAHYN--LATTLEDLGELEGAIAAYRD 341
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 66/136 (48%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGV + + ++ + A P A+ NL V D LD AV ++ ALS+KP
Sbjct: 152 LGVLVQKSGRLSESLDIHRKAIDLAPEDADVYYNLAVNLADLKRLDDAVSMFKHALSLKP 211
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
FSQ+L NLGVV G+++ A KAI +P A+ YNNLG+ G + + Y
Sbjct: 212 EFSQALTNLGVVLEQLGEVEDAEICFIKAIRISPNEAKIYNNLGIAQHSLGKLLASESNY 271
Query: 124 EQCLKIDPDSRNAGQN 139
L ++P A N
Sbjct: 272 RIALTLEPQFAEANTN 287
>gi|197106059|ref|YP_002131436.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Phenylobacterium zucineum HLK1]
gi|196479479|gb|ACG79007.1| predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Phenylobacterium zucineum HLK1]
Length = 496
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 185/374 (49%), Gaps = 37/374 (9%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA---KTIRFREKVMK 240
R L IGYV+P + + FI L HD +V +Y A +A IR R
Sbjct: 131 RKLRIGYVAPRFAGSQLRQFIAPILEGHDPDAVEVTLYPAEAATEADWPAWIRVRP---- 186
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
I G+D+ A ++R D ID+L + GHTA +LG+ A +PAPVQV WI + +T
Sbjct: 187 -------IGGLDDAAAADLIRADGIDVLNDCWGHTAGCRLGVFARKPAPVQVAWINFFHT 239
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITF 360
TGLP IDY + + P+ + E L R F + S + TPA G +T
Sbjct: 240 TGLPQIDYVLHGEVPGAPDLSDQFAETLWRAGPVFSPFRASADRLAPVETPAKAAGVVTL 299
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCK----PFCCDSVRHRFLS---TLEQLG 413
SFN+ AK++ L WA +L NSRL++K + P ++ R RFL+ +EQL
Sbjct: 300 ASFNHPAKLSDGCLAAWATVLRNARNSRLLLKYRYYADPLLQETTRARFLAHGVAVEQL- 358
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA----GS 469
L ++++ + ++D+ LD++P G+TTT E+L GVP + MA G
Sbjct: 359 -------LFGGHSTGEEYVRTFQVVDLMLDSWPSPGSTTTLEALSNGVPVLAMAEDSVGG 411
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
V+A LL GL L+ + +V AL+L D+ L LR +R + P+CD
Sbjct: 412 VYARG----LLEAAGLPELVTDTPEAFVARALELIGDIDGLDRLRTRVRPGFDEGPLCDE 467
Query: 530 QNFALGLESTYRNM 543
F LE+++R M
Sbjct: 468 AGFVRRLEASFRAM 481
>gi|222147877|ref|YP_002548834.1| hypothetical protein Avi_1162 [Agrobacterium vitis S4]
gi|221734865|gb|ACM35828.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 633
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 187/379 (49%), Gaps = 15/379 (3%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+S D H+ Y + + HD + V + A + + V++ I
Sbjct: 254 LKIGYLSSDLTIHATMYLLYDVFLAHDRSRFDVTFFCHTPPGQAAIQKTWDPVLQSEII- 312
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ +D +A + IDIL++L GHTA N+L +A APV+ +WIGYP +
Sbjct: 313 -AVGQMDNDGIAQEISRRGIDILIDLKGHTAGNRLAAVALSDAPVKASWIGYPGSVRGAG 371
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFL--CYTPSPEAGPVCPTP-ALTNGFITFGS 362
+DY +TD + P + K E+L RLPE + C P P+ L F S
Sbjct: 372 LDYHMTDPIVTPDDAKLWFEEKLCRLPETYQGNCSLTKPRPKPLKRADHGLPEEVFVFAS 431
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN+ AKI+P+ + +WA I+ AVP+S L + C ++ F +LG+ R+ +
Sbjct: 432 FNSPAKISPQSITLWASIMNAVPDSLLWILC---SGAQLQANFAEEFARLGIGRDRI-VF 487
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ DH+ L D++LDTFPY G TTT + L+ G+P +T G A V SLLT
Sbjct: 488 AQGVDYPDHLSRVGLADLALDTFPYNGHTTTSDLLWGGLPVLTKKGRSFAARVSESLLTA 547
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+GL L+A++ +E+V+ A++ A+ + L+ L + P+ D + F LE Y
Sbjct: 548 IGLPELVARDGEEFVERAVEFAAHPEKIVALKQKLEANRLREPLFDTERFTRHLERAYEM 607
Query: 543 MWHRYCKG------DVPSL 555
M R G DVP+L
Sbjct: 608 MAARARAGLAPDHIDVPAL 626
>gi|402303455|ref|ZP_10822550.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC9]
gi|400378699|gb|EJP31551.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC9]
Length = 483
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 193/372 (51%), Gaps = 24/372 (6%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IG+++P + S S F A L+ + Y V Y+ +ADA T R V +
Sbjct: 127 LRIGFIAPHFLDSSSSLFY-AGLMRGLREKYDVYAYALSDRADAFTESLRADVR-----Y 180
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANN-KLGMMACQPAPVQVTWIGYPNTTGLP 304
+ I ++ A +R D+ID+L++L GHT L ++A +PAPVQ++ IG+ TTG+
Sbjct: 181 ASLENISIEEQAECIRTDEIDVLIDLGGHTEGGMTLMVLARRPAPVQISGIGWFATTGVS 240
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP--EAGPVCPTPALTNGFITFGS 362
+D +TD + P T++ + EEL+RLP F+ TP+ A V P + +TFG
Sbjct: 241 FVDGFLTDEVLSPTGTEEFYSEELLRLPYAFVM-TPTAGMRAAEVSARP--VDEPVTFGV 297
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKC---KPFCCDSVRHRFLSTLEQLGLESLRV 419
N KI VL++W RIL VP SRLV++ P ++ L L+ + + R+
Sbjct: 298 LQNFMKINEAVLKMWERILKKVPKSRLVLQDAVDSPLRVTTI----LEMLDGMKMPMKRI 353
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+ P D++ Y +DI+LDTFPYAG +T +LYMGVP V++ G HA +G S+
Sbjct: 354 FVRPG---RQDYLADYGDIDIALDTFPYAGGASTATALYMGVPVVSLRGETHASRLGASI 410
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
LT G I +E Y Q+A+ LA + + R +LR + SP+ D + E
Sbjct: 411 LTAAGHTEWIGADERAYEQIAVDLAGRIGEVRAGRAALRAQVETSPLMDEAAYLRAAEEA 470
Query: 540 YRNMWHRYCKGD 551
+W +GD
Sbjct: 471 IARIWAE--RGD 480
>gi|427406071|ref|ZP_18896276.1| hypothetical protein HMPREF9161_00636 [Selenomonas sp. F0473]
gi|425708912|gb|EKU71951.1| hypothetical protein HMPREF9161_00636 [Selenomonas sp. F0473]
Length = 483
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 196/376 (52%), Gaps = 32/376 (8%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IG+++P + S S F A L+ + Y V Y+ +AD T R +
Sbjct: 127 LRIGFIAPHFLDSSSSLFY-AGLMRGLREKYDVYAYALSDRADDFTEALRTDIRCAS--- 182
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANN-KLGMMACQPAPVQVTWIGYPNTTGLP 304
+ I ++ A +R D+ID+LV+L GHT L ++A +PAPVQ++ IG+ TTG+P
Sbjct: 183 --LENISIEEQAERIRADEIDVLVDLGGHTEGGMTLMVLARRPAPVQISGIGWFATTGVP 240
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECF-LCYTPSPEAGPVCPTPALTNGFITFGSF 363
+D +TD + P T++ + EEL+RLP F + T A P+ P +TFG
Sbjct: 241 FVDGFLTDDVLSPAGTEEFYSEELLRLPHAFVMAPTDVMRAAPIAERP--EGEPVTFGVL 298
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH--RFLSTLEQL-GLESLRVD 420
N KI VL VWARIL VP SRLV++ D+V R + LE L G++
Sbjct: 299 QNFMKINESVLAVWARILKKVPKSRLVLQ------DAVDSPLRVTTILEMLDGMK----- 347
Query: 421 LLPL--ILLNH---DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
LP+ I + H D++ Y +DI+LDTFPYAG +T +LYMGVP V++ G HA +
Sbjct: 348 -LPMKRIFVRHGKKDYLADYGDIDIALDTFPYAGGASTATALYMGVPVVSLRGETHASRL 406
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
G S+LT G I +E Y ++A+ LA+ + + R +LR + SP+ D +
Sbjct: 407 GASVLTAAGHPEWIGADERAYEEIAVNLAARIDEMRAGRAALRAAVETSPLTDETAYLRA 466
Query: 536 LESTYRNMWHRYCKGD 551
E T W +GD
Sbjct: 467 AEETIARFWA--ARGD 480
>gi|381166068|ref|ZP_09875286.1| conserved hypothetical protein [Phaeospirillum molischianum DSM
120]
gi|380684800|emb|CCG40098.1| conserved hypothetical protein [Phaeospirillum molischianum DSM
120]
Length = 671
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 166/607 (27%), Positives = 248/607 (40%), Gaps = 68/607 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ E + D A ++ P + L I+ R A AL +
Sbjct: 82 NLGMLLTESGRLDEAEAAFQSGLATRPEVWMLWSGLARIHLARGRRTAAESALLRALELA 141
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P L NLG + G+ AA + E+A+A PT EA G R +G A+D
Sbjct: 142 PKAPALLVNLGNLRLESGRAVEAAALFEQAVAVAPTMPEALLGAGNAVRRSGDPLAALDY 201
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD-----------W--------- 162
Y + + + P + G LA ++ D + D W
Sbjct: 202 YRRAVAVRPG--DLGLIGRLAEARLSLCDWDGIERLRSDLVEPALAQPGPWIGPMQALTL 259
Query: 163 --------GKRFMRLYSQYTSWDNTKDPERP----------LVIGYVSPDYFTHSVSYFI 204
G+ F R + + + P L +GY+S D+ H S+ +
Sbjct: 260 PLTLTPSEGQVFARRRADQIAAEAKASGPSPRIARAGRRDRLTVGYLSADFHDHPTSHLM 319
Query: 205 EAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDK 264
HD +V S + D + +R V + ++ D+ D AA + +
Sbjct: 320 RGLFAAHDRAAVRVAALS--LGPDDGSA-YRRAVREGSDLFLDLAAEDNAAAAAAIAKAG 376
Query: 265 IDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH 324
IDILV++ HT N+L + A +PAPV V W+G P T+G ID+ I D + PP +
Sbjct: 377 IDILVDINVHTRGNRLALTALRPAPVAVNWLGLPGTSGASFIDWVIVDGVVAPPGAEAAF 436
Query: 325 VEELIRLPECFLCYTPSPEAGPVCPTPA------LTNGFITFGSFNNLAKITPKVLQVWA 378
E L+ LP CY P+ P+ P A L +G F FN KI P + W
Sbjct: 437 SESLLVLPH---CYQPNDRTQPISPDSAERAAYGLPDGAFVFCCFNQAYKIEPIMFGRWM 493
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV-----DLLPLILLNHDHMQ 433
RIL VP+S L + ++ R + G++ R+ + P L H H
Sbjct: 494 RILERVPDSVLWLLGDSVAMETNLRR---EAQARGIDPARLVFAAREPKPRHLARHRH-- 548
Query: 434 AYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNE 493
+ LDT Y TT ++L+ G+P +T G A VG SLL +GL LI +
Sbjct: 549 ----AGLGLDTLFYNAHTTASDALWAGLPILTTPGEAFASRVGASLLGALGLPELICPDL 604
Query: 494 DEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
D Y + A+ LA+D ALA + L S + D FA LE +R +W C G P
Sbjct: 605 DAYEEKAVALATDPAALATVTERLAAARLSSALFDTDRFARDLERGFRLIWDAACTGRRP 664
Query: 554 SLKRMEM 560
+R+E+
Sbjct: 665 --RRLEV 669
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P AEA NLG++ + LD+A +Q L+ +P + L ++ +G+ AA
Sbjct: 74 PEMAEAWLNLGMLLTESGRLDEAEAAFQSGLATRPEVWMLWSGLARIHLARGRRTAAESA 133
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+ +A+ P NLG L ++G A +EQ + + P
Sbjct: 134 LLRALELAPKAPALLVNLGNLRLESGRAVEAAALFEQAVAVAP 176
>gi|83312890|ref|YP_423154.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
magneticum AMB-1]
gi|82947731|dbj|BAE52595.1| Predicted O-linked N-acetylglucosamine transferase
[Magnetospirillum magneticum AMB-1]
Length = 636
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 164/591 (27%), Positives = 246/591 (41%), Gaps = 70/591 (11%)
Query: 16 MAIVFYELAFHFNP--HCAEACN-NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
MA+ Y+L N H A N V ++A + ++ + P+F + NL
Sbjct: 1 MALQLYQLWIGLNRDHHLLYAAYFNQAVTLSAAGRPEQARVSLEKSIELNPDFYPAYINL 60
Query: 73 GVVYTVQGKMDAAAEMIEK------AIAANPTYAE--AYNNLGVLYRDAGSISLAIDAYE 124
G V G+ DAA + AI + + A + + D I A +
Sbjct: 61 GGVMEALGQPDAAVDTWNGLVTRLGAITGHGIRMKCTALKQIARVLEDRHQIVAAENVLR 120
Query: 125 QCLKIDPDSRNAGQNRLLAMNYIN---------EGHD------------------DKLFE 157
Q L++D R ++ LLA + EG D D L
Sbjct: 121 QSLELDNTQRENAEH-LLASRMVQCHWPVIEPFEGMDAPLQMRNFSPLSLAAYTDDPLLH 179
Query: 158 AHRDW-------GKRFMRL--YSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
W G+R RL + D T+ L IGYVS D H+V Y I
Sbjct: 180 LASAWEHCCKMFGRRIPRLPDVTPADRADRTR-----LRIGYVSSDLKAHAVGYLIAEVF 234
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
HD ++ Y A ++++ W DI G++++ A +R+D IDIL
Sbjct: 235 GLHDRAKVEIFAYYC---GPAGEDPLKQRIRADFDHWIDITGMNDETAANRIRDDGIDIL 291
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V+L GHT + + +PAP+ V W+GYP T G Y I D PP + E++
Sbjct: 292 VDLNGHTKAARTRVFGMRPAPINVNWLGYPGTMGTAYHHYIIADEWIIPPGREMYCSEKV 351
Query: 329 IRLPECFLCYTPSPEAGPVCPTP------ALTNGFITFGSFNNLAKITPKVLQVWARILC 382
+RLP CY + V P L + F FN+ KI+P + W IL
Sbjct: 352 VRLP----CYQANDRRRAVASEPPSRAEVGLPEDKMVFCCFNSQQKISPLMFDRWMHILH 407
Query: 383 AVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
+VP S L + C + +++R E+ G+ RV + L + DH+ +L D+ L
Sbjct: 408 SVPESVLWLL---ECGEEIKNRLWEHAERGGIARERV-IFGKRLPSPDHLARMTLADLFL 463
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
DTFPY TT ++L+M VP +T++G A VG SL GL L+ +EYV++A+
Sbjct: 464 DTFPYGAHTTASDALWMSVPILTLSGHSFASRVGGSLSRSAGLPELVCSTPEEYVEMAIA 523
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L +D L R LR + + D LE Y MW + G +P
Sbjct: 524 LGNDRPRLLAYREQLRAAKPNAVMFDTNLLVSRLEDLYAEMWADFQAGRLP 574
>gi|304312282|ref|YP_003811880.1| hypothetical protein HDN1F_26540 [gamma proteobacterium HdN1]
gi|301798015|emb|CBL46237.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 730
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 160/580 (27%), Positives = 264/580 (45%), Gaps = 57/580 (9%)
Query: 6 VAYGEMLKFDMAIV--FYE--LAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
++Y E L A+V Y LA + P A NLG + + + A E ++ A+ +
Sbjct: 24 LSYAERLGGSPALVATLYRTWLARNEGPLNCVAWFNLGSVLDNDRDAGAAEEAFRKAIEL 83
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAA---EMIEKAIAANPTYAE-------AYNNLGVLYR 111
P + NLG+V +G+ + A ++E+ A+PT E A N++G L
Sbjct: 84 NPKLYHAHINLGLVLERKGQPEQAIAQWRVVEEG--ADPTNVEQRDLLTMALNHIGRLLE 141
Query: 112 DAGSISLAIDAYEQCLKIDPDSRNAGQNRL-----------------------------L 142
+ A A E+ L I+P+ +A + + L
Sbjct: 142 NRRQYQPASAALEKSLCINPNQEDAIHHLIFERQKQCAWPIYAPVGTLDAEALRACTSAL 201
Query: 143 AMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSY 202
AM +++ ++L A R ++ +L + N E+ + I Y S D+ TH V+
Sbjct: 202 AMLNVSDDPAEQLEIARRYIERKLPKLPPRLAP--NRYHHEK-IRIAYASGDFCTHPVAM 258
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
HD + V A+ + R++++ + ++ E ++A ++RE
Sbjct: 259 LTVQLFELHDRSQFDVY---AICWSPNDGGTLRQRIIDAADHYLPVHDKSEDEIARLIRE 315
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
++IDILV+L G T+ K+ M+A QPAP+Q+T++G P TT P I+Y I D P + +
Sbjct: 316 NEIDILVDLQGQTSGAKIHMIAQQPAPIQITYLGLPATTAQPGIEYVIADRYIIPKKYAK 375
Query: 323 KHVEELIRLPECFLCYTPSPEAGPVCPTP--ALTNGFITFGSFNNLAKITPKVLQVWARI 380
+ E+ I +P+ + G L S NN KITP+V VW I
Sbjct: 376 DYSEKPIYMPDVYQVSDQKRVPGKTLTRKEYGLPARKTVLCSLNNNHKITPEVFDVWMNI 435
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L VPNS L + + + + + G+ + ++ + D++ Y++ D+
Sbjct: 436 LRRVPNSVLWLLAD---NEWAKENLIKEAKARGIPAKQL-VFAERSGQGDYLARYAVADL 491
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LDTFP+ TT ++L+MG+P +TM+G A + +LLT GL LI + Y +LA
Sbjct: 492 FLDTFPFNAGTTANDALWMGLPVLTMSGRAFASRMAGALLTAAGLPELITHDLQGYEELA 551
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+QLASD AL LR L D SP+ D + F LE Y
Sbjct: 552 VQLASDKKALKALRQKLLDAKENSPLFDSEKFTRNLEKQY 591
>gi|296134823|ref|YP_003642065.1| Tetratricopeptide TPR_4 [Thiomonas intermedia K12]
gi|295794945|gb|ADG29735.1| Tetratricopeptide TPR_4 [Thiomonas intermedia K12]
Length = 733
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 156/594 (26%), Positives = 259/594 (43%), Gaps = 56/594 (9%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+NL A G + A+ YE A P A+A L + + A+ YQ+A S
Sbjct: 137 FFNLAEAQGLAGELAEAVKNYEQALRLQPGHAQARFGLAQVLRQLQGWAAALPHYQLAAS 196
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P+ + + G + A E+ + P AEA+ +G + + AI
Sbjct: 197 MAPDAPMGQYFWALALHMGGHVQQALELYTRITERWPDMAEAWVGIGSVQFGMNRLREAI 256
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR---------DWG-----KRF 166
AYEQ L + P++ NA + A + DD R D G + F
Sbjct: 257 AAYEQALTLQPENANALDGLVEARRKACDWRDDMAALEQRLHALARRGLDAGLPAPVRIF 316
Query: 167 MRLYSQYTSWD----------------------NTKDPERPLVIGYVSPDYFTHSVSYFI 204
LY+ + + + + L IGY+ D H ++ +
Sbjct: 317 TALYTPFDALELKAIAQSNALQSKPADCAPRCNEAARRDGRLRIGYLLADARDHPNAHNM 376
Query: 205 EAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDK 264
+ HD ++V YS + D +++ +R+++ ++ + ++ G ++++A +R+D
Sbjct: 377 LSVFGLHDRARFEVFTYSWGL--DDQSV-YRKRIREESEHFVELRGASDEEMARRIRDDG 433
Query: 265 IDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH 324
+ +LV+L GHTA+N+LG++ +PAPVQ+ ++G+P T+G +D+ + D PP + +
Sbjct: 434 VQVLVDLMGHTADNRLGVLWRKPAPVQMNYLGFPGTSGAECMDFVLVDRWVCPPGREAEM 493
Query: 325 VEELIRLPECF--LCY-----TPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
E +IRLP C+ L + P P A P GF+ F FNN KI+ +V W
Sbjct: 494 SEAVIRLPYCYNPLAHHAEMQVPPPPAREQAGLP--PQGFV-FCCFNNTNKISAEVFARW 550
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
RIL P S L + D V LG+E R+ P L HM L
Sbjct: 551 MRILQRTPGSVLWLY---RTHDLVDENLRRAAAALGVEPQRLVFAP-HLPREWHMARLQL 606
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
D+ LDT PY TTT ++L GVP +T+ G A V S+L L I + Y
Sbjct: 607 ADLFLDTTPYGAHTTTGDALRAGVPVLTVPGQTFASRVAASMLDAARLPECIQPDWPAYE 666
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
+ A++L + A R+ +++ P+ D LE Y W ++ +G+
Sbjct: 667 EEAVRLCAQGVAELKARLKSPEVL---PLFDTPRQVRDLERAYSQAWQQFVEGE 717
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A Y A P +A + LGV +A + A++ +P N+LG +
Sbjct: 51 AAALYRSALQLQPDLTDAQHLLGVALGQSGEYAEAERLVRQAIAAQPAQGAYWNSLGRLL 110
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
+QG+M A + +++A+ +P AE++ NL AG ++ A+ YEQ L++ P A
Sbjct: 111 LLQGRMPEAVQALQEALQLSPQNAESFFNLAEAQGLAGELAEAVKNYEQALRLQPGHAQA 170
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LGVA G+ ++ A A P N+LG + + + +AV+ Q AL + P
Sbjct: 72 LGVALGQSGEYAEAERLVRQAIAAQPAQGAYWNSLGRLLLLQGRMPEAVQALQEALQLSP 131
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
++S NL + G++ A + E+A+ P +A+A L + R + A+ Y
Sbjct: 132 QNAESFFNLAEAQGLAGELAEAVKNYEQALRLQPGHAQARFGLAQVLRQLQGWAAALPHY 191
Query: 124 EQCLKIDPDS 133
+ + PD+
Sbjct: 192 QLAASMAPDA 201
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98
V + + +A Y+ AL ++P+ + + + LGV G+ A ++ +AIAA P
Sbjct: 39 AVPLHQQGRVGEAAALYRSALQLQPDLTDAQHLLGVALGQSGEYAEAERLVRQAIAAQPA 98
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+N+LG L G + A+ A ++ L++ P +
Sbjct: 99 QGAYWNSLGRLLLLQGRMPEAVQALQEALQLSPQN 133
>gi|85710265|ref|ZP_01041330.1| TPR repeat protein [Erythrobacter sp. NAP1]
gi|85688975|gb|EAQ28979.1| TPR repeat protein [Erythrobacter sp. NAP1]
Length = 694
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 159/604 (26%), Positives = 266/604 (44%), Gaps = 77/604 (12%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ + A Y+ A +P A+A NNLG + + LD+A+ + A ++
Sbjct: 111 YNLGLVLEDKGDPAGAEAAYKRAIAIDPSLAQARNNLGGVLIAQGRLDEAIAQLEQACAL 170
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P ++ N G+++ A + ++A+ A P + A NLG L ++ G I+ A++
Sbjct: 171 RPELAEVHNTHANALKKAGRLEEARKAYKRALEAQPDFVTARFNLGSLEQEHGEITQAVE 230
Query: 122 AYEQCLKIDPD---------------------SRNAGQNRLLAMN----------YINEG 150
Y LK P +AG L ++ + +
Sbjct: 231 EYRAVLKAQPGHSLARAGLVQSLAKMCDWDALEEHAGAIAQLGVSGGAVPAFSLLALEDA 290
Query: 151 HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERP--LVIGYVSPDYFTHSVSYFIEAPL 208
+L A R+W M+ + + RP L IGY S D+ H+ + I L
Sbjct: 291 PARQLARA-RNWA---MQRFGNIAPASIERRAARPEKLKIGYFSADFHDHATMHLIAGLL 346
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
HD +++ +S +A+ +R + + D+ + + ++ A+ R+ +IDI
Sbjct: 347 AAHDSDRFEIHAFS---YGEAREDEYRALAEQAVDQFHDVACLTDDEIVALSRKLEIDIA 403
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP---PETKQKHV 325
++ G+T ++ + A + APVQV ++GYP T G IDY LADP P+ ++ HV
Sbjct: 404 LDCKGYTTGSRSQVFAHRLAPVQVNYLGYPGTMGAGFIDY----ILADPTVLPDAQRAHV 459
Query: 326 -EELIRLPECFLCYTPSPEAGPVCPTPALT--------NGFITFGSFNNLAKITPKVLQV 376
E +IRLP Y P ++ V P P+ T + F+ F FN KIT +
Sbjct: 460 SERIIRLPHT---YQPGDDSAAV-PQPSDTRADHGLPGDAFV-FCCFNASYKITRDRFAL 514
Query: 377 WARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP--LILLNH----D 430
W R L AV S L + + D+V L +E+ R + P L+ H
Sbjct: 515 WMRALGAVEGSVLWL----YRSDAVAE------ANLRMEAKRCGIDPHRLVFAYHLPRTQ 564
Query: 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA 490
H+ + +++LDT Y TT + L+ G+P VT AG A V S+L GL L+
Sbjct: 565 HLARHRHANLALDTSAYGAHTTASDCLWAGLPIVTRAGDQFAARVAASVLHAAGLDELVT 624
Query: 491 KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
++ EY L + LA+D L+ +R + +P D + + E+ W R+ G
Sbjct: 625 HSDAEYETLIVALATDADRLSTIREKFARSRTAAPFFDTKLYTRAFEAGLEAAWKRWFAG 684
Query: 551 DVPS 554
P+
Sbjct: 685 HPPA 688
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
+P+ A A NLG++ +D+ + A Y+ A++I P+ +Q+ NNLG V QG++D A
Sbjct: 102 LSPNFAGAAYNLGLVLEDKGDPAGAEAAYKRAIAIDPSLAQARNNLGGVLIAQGRLDEAI 161
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+E+A A P AE +N + AG + A AY++ L+ PD
Sbjct: 162 AQLEQACALRPELAEVHNTHANALKKAGRLEEARKAYKRALEAQPD 207
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A E ++ ++ PNF+ + NLG+V +G A ++AIA +P+ A+A NNLG +
Sbjct: 92 AEESFRRLEALSPNFAGAAYNLGLVLEDKGDPAGAEAAYKRAIAIDPSLAQARNNLGGVL 151
Query: 111 RDAGSISLAIDAYEQCLKIDPD 132
G + AI EQ + P+
Sbjct: 152 IAQGRLDEAIAQLEQACALRPE 173
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A + L +Y+ + D A+ Q L P+ + N G V G+ A E +
Sbjct: 42 AIDALTALYRQQRFAD-ALGSAQAMLREFPDTMAAWNLAGACARVLGQTAIAEESFRRLE 100
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD---SRNAGQNRLLAMNYINE 149
A +P +A A NLG++ D G + A AY++ + IDP +RN L+A ++E
Sbjct: 101 ALSPNFAGAAYNLGLVLEDKGDPAGAEAAYKRAIAIDPSLAQARNNLGGVLIAQGRLDE 159
>gi|429737701|ref|ZP_19271557.1| hypothetical protein HMPREF9163_02451 [Selenomonas sp. oral taxon
138 str. F0429]
gi|429152064|gb|EKX94901.1| hypothetical protein HMPREF9163_02451 [Selenomonas sp. oral taxon
138 str. F0429]
Length = 484
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 178/334 (53%), Gaps = 14/334 (4%)
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ Y V Y+ +AD T R V + + + ++ A +R D+ID+LV+L G
Sbjct: 154 EQYDVYAYALDDRADGFTESLRGAVN-----YHALANLSIEEQAERIRADEIDVLVDLGG 208
Query: 274 HTANN-KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
HT L ++A +PAPVQ++ IG+ TTG+P +D +TD++ P T++ + EEL+RLP
Sbjct: 209 HTDGGMTLMVLAHRPAPVQISGIGWFATTGVPFVDGFLTDNVLSPAGTEEFYSEELLRLP 268
Query: 333 ECFLCYTPSP--EAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
F +TP A V PA + +TFG F N KI + L+VW RIL +P ++L+
Sbjct: 269 YAF-HFTPDSAMRASAVAERPA--DAPVTFGVFQNFMKINEECLKVWGRILKKLPQAQLI 325
Query: 391 VKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT 450
++ L +E L L + R+ + D++ Y +DI+LDTFPYAG
Sbjct: 326 LQDAAVDSPLRVTTILEMIEGLKLPAKRIFVRTG---KRDYLGDYGDIDIALDTFPYAGG 382
Query: 451 TTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510
+T +LYMGVP VTM G HA +G S+LT G IA + Y LA+++A D+ A+
Sbjct: 383 ASTATALYMGVPVVTMRGETHAARLGASMLTAAGHAEWIADDARTYENLAVRMAEDIAAV 442
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
R +LR KS + DG ++ + +W
Sbjct: 443 RASRTALRGEAEKSALMDGASYLSAVTDAIERIW 476
>gi|83311603|ref|YP_421867.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
magneticum AMB-1]
gi|82946444|dbj|BAE51308.1| Predicted O-linked N-acetylglucosamine transferase
[Magnetospirillum magneticum AMB-1]
Length = 658
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 236/558 (42%), Gaps = 45/558 (8%)
Query: 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA 92
E+ LG + +++A + + + P F NLG++ AA ++ A
Sbjct: 104 ESLLALGNALRTLSRMEEAAQAFHRLTRVAPGFVGGHINLGILLVSMADTQAALSALDDA 163
Query: 93 IAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE-GH 151
+ +P E + G G S AI A E+ L I+P A + L A + +
Sbjct: 164 VRLHPGVGELHALRGQALLRLGRHSEAIAALEKALAINPALVPARGHLLRAYRETADWDN 223
Query: 152 DDKLFEAHRDW-----------------------GKRFMRLYSQYTSWDNTKDPER---- 184
+D+LF R G+ R+ ++ P
Sbjct: 224 EDRLFAEIRAAIQRGEIKGQLPLSTQDALFYPFTGEEMRRIAELEVAFRVPGQPRPAVHP 283
Query: 185 ------PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
PL +GY+SPD+ H+ + +HD + V YS V D + +R+++
Sbjct: 284 QPKTAPPLTVGYLSPDFREHATMHLAGDIFAHHDRSRVRPVAYS--VGPDDGS-DWRQRM 340
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ + D+ + ++ A + D ILV+L+ T + G+ A +PAPVQ W+G
Sbjct: 341 ARDCEAFVDLSSLSDRAAAERIAADCAHILVDLSVFTRYARPGIAALRPAPVQAVWLGLA 400
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF---LCYTPSPEAGPVCPTPALTN 355
++ P +DY I D + PP E+LIRLP + L ++P P P + L +
Sbjct: 401 ASSAAPWLDYAIVDPVLVPPAHGGHFSEKLIRLPNSYQANLAWSP-PGVAPSRASLGLPD 459
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
+ SFN K+ +W IL +P + L + P D R R + + G++
Sbjct: 460 DRLVLCSFNGHRKLDRATFTLWLEILAELPQAVLWLLSPP---DLARQRLEAAAAKAGID 516
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
S R+ P L DH+ D+ +D TT +SL MGVP +T AG+ V
Sbjct: 517 SARLIWAP-SLPRPDHLARLPAADLFVDALVCGAHTTAADSLRMGVPLITAAGNRLGSRV 575
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
SLL +GL L ++ LA++L D + LA LR L +L+ +SP D FA
Sbjct: 576 AASLLHALGLPDLAVESPSALKALAIELGRDRSRLAALRTRLMELLPRSPAFDPAGFASH 635
Query: 536 LESTYRNMWHRYCKGDVP 553
LE Y W+R+ G P
Sbjct: 636 LEDGYEAAWNRHAAGKRP 653
>gi|414168065|ref|ZP_11424269.1| hypothetical protein HMPREF9696_02124 [Afipia clevelandensis ATCC
49720]
gi|410888108|gb|EKS35912.1| hypothetical protein HMPREF9696_02124 [Afipia clevelandensis ATCC
49720]
Length = 661
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 157/594 (26%), Positives = 260/594 (43%), Gaps = 56/594 (9%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+YN G+A + + AI + A N AE NN G + D + A+ + AL+
Sbjct: 75 LYNHGLALKALGRAGEAIAQFTRALAINSDDAETLNNRGSAFNDLKDHQSALADFDRALA 134
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PN++ + +N G + + A +A+A P + E++ G+ ++
Sbjct: 135 LQPNYALAHHNRGNALFGLARHEEALAAYRRALALTPNFLESWTGAGLCLHKLKRHDESV 194
Query: 121 DAYEQCLKIDPD----SRNAGQNRLLAMNYINEGHDDKLFEAHRD------------WG- 163
AY+ KI+PD R+LA ++ G D + E D W
Sbjct: 195 AAYDAARKINPDYPFLKGIVLHQRMLACDW--SGIADLIAEIETDIAAGKPSAEPFGWQG 252
Query: 164 --------KRFMRLYSQYTSWDNTKD--PERP-----LVIGYVSPDYFTHSVSYFIEAPL 208
++ +YS N + P RP + IGYVS D+ + ++ + L
Sbjct: 253 VATSDRSLQQCAEIYSAAMFPPNHRGLPPARPNNGDTIRIGYVSGDFRAQATAFLLAGVL 312
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
HD +++ + + T R+++ I G+++ + A +R+ IDIL
Sbjct: 313 EQHDRGTFEIHAFDNGWDDGSDT---RKRIAAAVHRITPIRGLNDAQAAQAIRDSGIDIL 369
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V L G+ ++ G+ A +PAPVQV ++G+P T G P +DY + D + P + E++
Sbjct: 370 VNLNGYFGEDRNGVFAQRPAPVQVNYLGFPGTLGAPYVDYIVADPIVIPDAQRAFFTEKV 429
Query: 329 IRLPECFLC----YTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAV 384
+ LP + S A +GF+ F FNN KITP+ W RIL V
Sbjct: 430 VHLPHSYQANDNRRAISDRAFTRTELGLPQDGFV-FCCFNNNYKITPQTFAGWMRILERV 488
Query: 385 PNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH----DHMQAYSLMD 439
P S L +++ P ++R ++ G+ VD L+ DH+ + D
Sbjct: 489 PGSVLWLIEDNPLASANLR-------KEAGVHG--VDPSRLVFAERVPPEDHLARHRCAD 539
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
+ LDT PY TT ++L+ +P +T G A V SLL V L L+ ++D+Y +L
Sbjct: 540 LFLDTLPYNAHTTASDALWARLPVLTCTGGTFAGRVAASLLLNVALPELVTSSQDDYERL 599
Query: 500 ALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A++LA+ L LR L +P+ D + F LE Y M R G P
Sbjct: 600 AVELATQPERLNALREKLAANRLTTPLFDTERFTRHLEQAYAAMHARRKAGQKP 653
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K D A F A NP+ A N G+ K +A+ + AL+I + +++LNN
Sbjct: 53 KHDEAERFLRAAVKLNPNAQAALYNHGLALKALGRAGEAIAQFTRALAINSDDAETLNNR 112
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
G + +A ++A+A P YA A++N G
Sbjct: 113 GSAFNDLKDHQSALADFDRALALQPNYALAHHNRG 147
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A + LG I D+A + A+ + PN +L N G+ G+ A +A+
Sbjct: 40 ALSILGAILVGSGKHDEAERFLRAAVKLNPNAQAALYNHGLALKALGRAGEAIAQFTRAL 99
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
A N AE NN G + D A+ +++ L + P+ A NR
Sbjct: 100 AINSDDAETLNNRGSAFNDLKDHQSALADFDRALALQPNYALAHHNR 146
>gi|300022675|ref|YP_003755286.1| hypothetical protein Hden_1151 [Hyphomicrobium denitrificans ATCC
51888]
gi|299524496|gb|ADJ22965.1| TPR repeat-containing protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 818
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 150/586 (25%), Positives = 253/586 (43%), Gaps = 62/586 (10%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+++ AI Y A +P A+A N+ + + ++A+ YQ L+I P+ +++ ++
Sbjct: 243 RYEEAIDVYSRAALTDPSSADALLNMALAFTSLGRKEEALASYQAGLAIDPDRAEAYASV 302
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G + G D A + EKAI N T A A+ NL V ++ A+ A+ + ++ PD
Sbjct: 303 GNLLRGMGMADGAIQAYEKAIDLNSTLALAHYNLAVTLKERERYDEALAAFSRSVEHAPD 362
Query: 133 SRNAGQNRLLAMNYIN-----EGHD------------------------------DKLFE 157
S NR MN EG D D+L
Sbjct: 363 S---VANRFERMNLRRVLCDWEGLDREEADCLDQFRQRKELVAPFQLISIPSTRADQLQA 419
Query: 158 AHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYK 217
++ + ++T N + + +G++S D+F H+ + + L D ++
Sbjct: 420 GRKNAATLSAPVALRFTQHRNGLGVGQRIRVGFLSADFFNHATAMLLVEVLENIDRSRFE 479
Query: 218 VVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTAN 277
+ Y D +R R V+ + I + ++ A + +D IDILV+L G+T +
Sbjct: 480 LFGY-CFSPDDGSDLRRR--VVAAFDHYVPIGNMTDRNAARAIHDDGIDILVDLKGYTRD 536
Query: 278 NKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC 337
+ +++ +PAP+QV ++GYP + G+ IDY + D + P + + E ++ LP+C
Sbjct: 537 GRPEILSYRPAPIQVNYLGYPGSMGMDGIDYIVADPIVAPMAHQGDYSERIVHLPDC--- 593
Query: 338 YTPSPEAGPVCPTP------ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV 391
Y P+ + P L F SFNN K+ + VW +L V S L +
Sbjct: 594 YQPNDRKRTISELPVTRADAGLPEDAFVFCSFNNSYKLNATMFDVWMSLLRNVDGSVLWL 653
Query: 392 KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH----DHMQAYSLMDISLDTFPY 447
C R Q G++ R L+ + +H+ + L D+ LD P
Sbjct: 654 LVPTATC---RENLRREAAQRGVDPDR-----LVFASRKPIAEHLARHRLADLFLDALPC 705
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
TT ++L+ G+P +T G + V SLLT VGL L+ KN D+Y +LAL LA D
Sbjct: 706 NAHTTASDALWAGLPVITATGETFSGRVAASLLTAVGLPELVTKNLDDYAELALALARDK 765
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ LA+L L +P+ D + E M G+ P
Sbjct: 766 SKLADLNAKLSRQRETAPLFDSMRYTKNFERALSMMCDIARAGEPP 811
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A+ N LG + + ++A++ Y A P+ + +L N+ + +T G+ + A +
Sbjct: 228 AQNLNELGDYLRTQWRYEEAIDVYSRAALTDPSSADALLNMALAFTSLGRKEEALASYQA 287
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
+A +P AEAY ++G L R G AI AYE+ + ++
Sbjct: 288 GLAIDPDRAEAYASVGNLLRGMGMADGAIQAYEKAIDLN 326
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
K+ ++ L+ P +L++LG++ A + I +++A++P Y +A+ NL ++
Sbjct: 42 KSETAHRRVLAKAPGHPPTLHHLGLIAFKCNDGARAVDYIRQSLASDPKYHQAWLNLAII 101
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNA 136
D AI+A +QC+ + P++ A
Sbjct: 102 LADLKRSQEAIEACKQCVGLQPENSAA 128
>gi|338975698|ref|ZP_08631047.1| TPR domain-containing protein [Bradyrhizobiaceae bacterium SG-6C]
gi|338231007|gb|EGP06148.1| TPR domain-containing protein [Bradyrhizobiaceae bacterium SG-6C]
Length = 661
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 157/594 (26%), Positives = 260/594 (43%), Gaps = 56/594 (9%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+YN G+A + + AI + A N AE NN G + D + A+ + AL+
Sbjct: 75 LYNHGLALKALGRAGEAIAQFTRALAINSDDAETLNNRGSAFNDLKDHQSALADFDRALA 134
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PN++ + +N G + + A +A+A P + E++ G+ ++
Sbjct: 135 LQPNYALAHHNRGNALFGLARHEEALAAYRRALALTPNFLESWTGAGLCLHKLKRHDESV 194
Query: 121 DAYEQCLKIDPD----SRNAGQNRLLAMNYINEGHDDKLFEAHRD------------WG- 163
AY+ KI+PD R+LA ++ G D + E D W
Sbjct: 195 AAYDAARKINPDYPFLKGIVLHQRMLACDW--SGIADLIAEIETDIAAGKPSAEPFGWQG 252
Query: 164 --------KRFMRLYSQYTSWDNTKD--PERP-----LVIGYVSPDYFTHSVSYFIEAPL 208
++ +YS N + P RP + IGYVS D+ + ++ + L
Sbjct: 253 VATSDRSLQQCAEIYSAAMFPPNHRGLPPARPNNGDTIRIGYVSGDFRAQATAFLLAGVL 312
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
HD +++ + + T R+++ I G+++ + A +R+ IDIL
Sbjct: 313 EQHDRGTFEIHAFDNGWDDGSDT---RKRIAAAVHRITPIRGLNDAQAAQAIRDSGIDIL 369
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEEL 328
V L G+ ++ G+ A +PAPVQV ++G+P T G P +DY + D + P + E++
Sbjct: 370 VNLNGYFGEDRNGVFAQRPAPVQVNYLGFPGTLGAPYVDYIVADPIVIPDAQRAFFSEKV 429
Query: 329 IRLPECFLC----YTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAV 384
+ LP + S A +GF+ F FNN KITP+ W RIL V
Sbjct: 430 VHLPHSYQANDNRRAISDRAFTRTELGLPQDGFV-FCCFNNNYKITPQTFAGWMRILERV 488
Query: 385 PNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH----DHMQAYSLMD 439
P S L +++ P ++R ++ G+ VD L+ DH+ + D
Sbjct: 489 PGSVLWLIEDNPLASANLR-------KEAGVHG--VDPSRLVFAERVPPEDHLARHRCAD 539
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
+ LDT PY TT ++L+ +P +T G A V SLL V L L+ ++D+Y +L
Sbjct: 540 LFLDTLPYNAHTTASDALWARLPVLTCTGGTFAGRVAASLLLNVALPELVTSSQDDYERL 599
Query: 500 ALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A++LA+ L LR L +P+ D + F LE Y M R G P
Sbjct: 600 AVELATQPERLNALREKLAANRLTTPLFDTERFTRHLEQAYAAMHARRKAGQKP 653
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K D A F A NP+ A N G+ K +A+ + AL+I + +++LNN
Sbjct: 53 KHDEAERFLRAAVKLNPNAQAALYNHGLALKALGRAGEAIAQFTRALAINSDDAETLNNR 112
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
G + +A ++A+A P YA A++N G
Sbjct: 113 GSAFNDLKDHQSALADFDRALALQPNYALAHHNRG 147
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A + LG I D+A + A+ + PN +L N G+ G+ A +A+
Sbjct: 40 ALSILGAILVGSGKHDEAERFLRAAVKLNPNAQAALYNHGLALKALGRAGEAIAQFTRAL 99
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
A N AE NN G + D A+ +++ L + P+ A NR
Sbjct: 100 AINSDDAETLNNRGSAFNDLKDHQSALADFDRALALQPNYALAHHNR 146
>gi|46202065|ref|ZP_00053827.2| COG3914: Predicted O-linked N-acetylglucosamine transferase,
SPINDLY family [Magnetospirillum magnetotacticum MS-1]
Length = 722
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 159/564 (28%), Positives = 256/564 (45%), Gaps = 32/564 (5%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
LG M + D A + A P A+A LG + ++ A E Y+ AL++
Sbjct: 171 GLGEFLAAMGRHDDAAAHFRRAVEIQPANADAACALGAELQAAFRIEAATEAYRHALAVD 230
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL-AID 121
P+ +L LG V+ G+ A ++E+A +P + L VL R + L A D
Sbjct: 231 PDLVAALVGLGRVHLEAGRDHEAVPLLERAYRLSPDEGGILDML-VLAR----LQLCAWD 285
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR-FMRLYSQ-----YTS 175
E + A +R++ ++ D AH+D R + R+ + +
Sbjct: 286 GLEPLRAALLERIRA--DRMVVNPFVAILADAD--SAHQDLAARQWARIVTPADAPLFRH 341
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR 235
+P R L IGY+S D H +++ + HD +++ YS + D +R R
Sbjct: 342 VPPEPEPGRRLRIGYMSSDLHDHPLAHLMVGIFENHDRARFEMRAYS-LGYDDGSPMRRR 400
Query: 236 EKVMKKGGIWRDIYGIDE---KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
+ ++ ID+ + A ++ D IDILV+L G+T + ++A +PAP+QV
Sbjct: 401 -----IAACFDEVVQIDQMGGAEAARRIQTDGIDILVDLNGYTNHGNPAVLAYRPAPIQV 455
Query: 293 TWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA 352
+ GY T G +DY I D + P + E ++++P + T + P +
Sbjct: 456 NFQGYAATLGADFMDYIIGDPVTLPLSEQPHFAEAIVQMPYSYHPGTVTRSMAESVPKRS 515
Query: 353 ---LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
L F FNN K TP+V VW R+L AVP+S L + + +V+ L+ +
Sbjct: 516 DFGLPEAGFVFCCFNNAGKFTPEVFAVWMRLLKAVPDSVLWLLDR---NGTVKDNILAQV 572
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
+ G++ RV L P + L H+ L D+ LDT PY T ++L+ G+P +T G
Sbjct: 573 DAHGVDRGRVVLAPRVPLPL-HLARQQLADLFLDTLPYNAHVTASDALWAGLPLLTCLGH 631
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
A V SLL + L LI + ++Y AL+LA D L LR L + SP+ D
Sbjct: 632 AFAGRVAGSLLKVLELDELITTDLEQYEARALELARDRGRLDGLRARLMANKASSPLFDV 691
Query: 530 QNFALGLESTYRNMWHRYCKGDVP 553
+ LE+ Y +MW R+C G P
Sbjct: 692 ALYTRHLEAAYASMWERWCAGRAP 715
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 13 KFDMAIVFYELAFHFNPHCAEA-CNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNN 71
+++ A+ YE A P AEA C V++ + D A + + AL KP+ +
Sbjct: 113 RYEEALGCYERALALAPDFAEAWCAKGRVLFALKRESD-AEKAMREALRCKPDLVPAHMG 171
Query: 72 LGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
LG G+ D AA +A+ P A+A LG + A I A +AY L +DP
Sbjct: 172 LGEFLAAMGRHDDAAAHFRRAVEIQPANADAACALGAELQAAFRIEAATEAYRHALAVDP 231
Query: 132 D 132
D
Sbjct: 232 D 232
>gi|299135312|ref|ZP_07028503.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
gi|298590289|gb|EFI50493.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
Length = 700
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 153/586 (26%), Positives = 241/586 (41%), Gaps = 43/586 (7%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G A + +FD A+ Y+ +P +A D+A ++ LS P
Sbjct: 116 GNALRRLCRFDEALAVYDRLLSADPQSEDAALGRATALAQAQRFDEAFPIFERLLSQNPK 175
Query: 65 FSQSLNNLGVVYTVQGKMDA-AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ + LG K A A ++AI +P A+A+ G + A+ +
Sbjct: 176 LASAWAGLGNALVSSHKSYAEAVSAFDRAIEISPGLADAWAGRGGAFLAMKDFERALPNF 235
Query: 124 EQCLKIDPDSRNAGQNRL-LAMNYINEGH-DDKLFEAHRDWGK----------------- 164
E+ L +DP R +R +A + H ++ + E R +
Sbjct: 236 ERALSLDPHQRFLRGDRFGVAAMLCDWSHREEDVREMRRGIAEGRYPSAPTHFLYAFDEP 295
Query: 165 ----RFMRLYSQYTSWDNTKDPERP------LVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
+ R Y+ + P + + IGY S D+ H+ S+ I HD
Sbjct: 296 AMHLKASRAYADLMYSTASTAPLKSGARTGKIRIGYFSSDFGDHATSFLIARLFELHDRS 355
Query: 215 NYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIY-GIDEKKVAAMVREDKIDILVELTG 273
+ V+ + A+ +V K W ++ + + +VR +IDI ++L G
Sbjct: 356 KFDVIGFPV---GPARFGDITNRVRKSFDGWFELGPRVSIESCVQIVRAQQIDIAIDLNG 412
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
+ + + A + AP+QV ++GYP+T G IDY I D + PP + E L LP
Sbjct: 413 YAQEPRSDIFAARVAPIQVAYLGYPSTMGASFIDYLIADKIVVPPAQRANFAEHLAYLPN 472
Query: 334 CFLCYTPSPEAGPVCPT----PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL 389
C+ + P P L + F SFNN KI P W IL VP S L
Sbjct: 473 CYQVNDTTTRVIPNDPVFRRDHGLPDAGFVFCSFNNNNKINPGTFTDWMTILRRVPGSVL 532
Query: 390 VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAG 449
+ D V G+ R+ P L H+ + L D+ LDT PY
Sbjct: 533 WLLKN---SDVVAQNLRREASARGINPNRLVFAPRADLPR-HLARHRLADLFLDTLPYNA 588
Query: 450 TTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH-LIAKNEDEYVQLALQLASDVT 508
TTT ++L G+P +T+ G A V S+LT VGL+ L+ + +EYV+ A+ LA+D
Sbjct: 589 HTTTSDALLAGLPVLTLQGEAFAGRVAASILTTVGLQDGLVTFSREEYVERAVALATDAD 648
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
L +R L + + SP+ D + F LES Y M+ R G P+
Sbjct: 649 RLDGIRKRLVEYVRTSPLFDIKRFTADLESLYEAMYQRQASGLPPA 694
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 44/97 (45%)
Query: 44 DRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY 103
DR +L A ++ L I P SL NL V QG + E E+A+A P A+
Sbjct: 19 DRGDLANADRYFRATLKIVPAHGPSLANLAAVLVHQGHFEEGRERAEQAVAVGPPSADVL 78
Query: 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
N LG G S AI + LKIDP S +A R
Sbjct: 79 NTLGFALGRLGRYSEAIKVTDDALKIDPSSIDAQLTR 115
>gi|425449354|ref|ZP_18829194.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 7941]
gi|389764011|emb|CCI09572.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 7941]
Length = 726
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 188/375 (50%), Gaps = 16/375 (4%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
K P R + IGY++ HSV + YH+ +++ Y AD T EK
Sbjct: 355 KSPARKIKIGYIAHTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEIT----EKWF 410
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ +++ A +R+D +DILV+L T N +MA +PAP+QVTW+G +
Sbjct: 411 INNSDYSYNLPAKIEQITARIRQDNLDILVDLDSLTNNTTYLVMALKPAPIQVTWLGL-D 469
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN---- 355
+G+P IDY I D+ P ++ + E++IRLP +L E G PT T+
Sbjct: 470 ASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLS-VDGFEVG--VPTRRRTDLNIP 526
Query: 356 -GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQLG 413
I + + + K T ++ + +IL VPNS L++K F +++R FL + ++LG
Sbjct: 527 DDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKG--FADKETIRELFLKSADELG 584
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ R+ LP L H + DI LDT+PY+G TTT E+L+MG+P VT G A
Sbjct: 585 ISQDRLRFLPNDLHEETHRANLGIADIILDTYPYSGATTTLETLWMGIPLVTRVGEQFAA 644
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ + G+ IA +E+EYVQ ++L D +R LR SP+ + + F
Sbjct: 645 RNSYTFMKNAGISQGIAWSEEEYVQWGIKLGLDQNLREEVRYQLRQSRHTSPLWNAKQFT 704
Query: 534 LGLESTYRNMWHRYC 548
LE+ Y+ MW+ Y
Sbjct: 705 RDLETAYQQMWNIYS 719
>gi|445499828|ref|ZP_21466683.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase [Janthinobacterium sp.
HH01]
gi|444789823|gb|ELX11371.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase [Janthinobacterium sp.
HH01]
Length = 1067
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 165/593 (27%), Positives = 258/593 (43%), Gaps = 58/593 (9%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
+P AC NL V+ + + A + A++ P F ++ NLG + G+ + A
Sbjct: 63 SPLVYAACFNLAVVLSNSGDDAGAEAVLRKAIAQNPGFVEARLNLGTLLERTGRPEDALA 122
Query: 88 M--------IEKAIAANPT-YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN--- 135
M ++ I NPT Y + NNLG L A L++DP N
Sbjct: 123 MWKTILTDEVQPDIKTNPTLYVQTLNNLGRLLEIRKRYPEAEAMLALSLRVDPQQANVMT 182
Query: 136 ---------------AGQNRL-----------LAMNYINEGHDDKLFEAHRDWGKRFMRL 169
+G + LAM + +L A R ++
Sbjct: 183 HWVHLRQKQCEWPVYSGLEHISVATMMDGTSALAMLSASADPAQQLAAARRFVNEKVNAA 242
Query: 170 YSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
+ T L IGY+S D+ +H+VS HD ++V +S + D
Sbjct: 243 VAPLTGQHGYGHGR--LRIGYLSSDFCSHAVSILTAELYELHDRSKFEVYAFS-WSREDG 299
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
IR R V+K + I + +++ A +R +IDILV+L G T + ++A +PAP
Sbjct: 300 SPIRAR--VVKAMDHYIRIDALTDEQAARTIRAHEIDILVDLHGLTLGARPNILAYRPAP 357
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP--EAGPV 347
VQ+T++G+P +TGLP +DY I D PE + E+ + LP+ F A P
Sbjct: 358 VQLTYLGFPGSTGLPGVDYVIADEFLITPEMTKDFTEKPLYLPDTFQINDRQRLIAAKPT 417
Query: 348 CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFL 406
+ L F SFNN K TP + VW IL VPNS L +V P VR
Sbjct: 418 RASVNLPEDAFVFVSFNNNFKFTPDLFTVWMNILRRVPNSVLWLVADYP----EVRENLY 473
Query: 407 STLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466
E+ G+ R+ + + +++ Y L D+ LDTFP+ TT ++L+ G+P +T
Sbjct: 474 RYAEEAGIARERL-IFNSRAVPAEYLARYQLADLFLDTFPFNAGTTASDALWAGLPLLTC 532
Query: 467 AGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV 526
AG + + SLL V L LI N +Y + A+ LA+D +A+++ L P+
Sbjct: 533 AGQTFSSRMAGSLLRAVDLPQLITYNFADYEEKAVALANDPARIASMKRQLAANRLTCPL 592
Query: 527 CDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTKI 579
D F LE+ + K P+ R+ + V +EPS+ +EP +I
Sbjct: 593 FDSPRFVRNLEAALQ-------KVAKPAAPRLAAPEHAVRPQEPSQPAEPVRI 638
>gi|292669606|ref|ZP_06603032.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648815|gb|EFF66787.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 484
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 210/380 (55%), Gaps = 29/380 (7%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
TK L +G+++P + + S + F APL+ ++ V YS + D F E+
Sbjct: 119 RTKVHHERLRVGFLAPHFLSSSSALFY-APLLRGLTKSCDVYAYSLSDRTD----DFTEE 173
Query: 238 VMKKGGIWRDIYG---IDEKKVAAMVREDKIDILVELTGHTANN-KLGMMACQPAPVQVT 293
M+ G + ++ I+E+ A +R D++D+L++L GHT L ++A +PAPVQ++
Sbjct: 174 -MRGGSVRYNVLANLSIEEQ--AQAIRTDEVDVLIDLGGHTEGGMTLMILARRPAPVQLS 230
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPE--AGPVCPTP 351
IG+ TTG+ +D +TD + P T + EE++ LP F + P + A PV P
Sbjct: 231 AIGWFATTGVSFVDGILTDEILTPEGTDDFYSEEVMCLPYAF-AFGPRADMRAAPVSARP 289
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH--RFLSTL 409
A + +TFG+F N KI +VL+VW +IL +P ++L+++ D+V R + L
Sbjct: 290 A--DAPVTFGAFVNFMKINEEVLKVWGQILKKLPKAQLILQ------DTVESPLRVTTIL 341
Query: 410 EQLGLESLRVDLLPLILLN--HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
E L E L++ + + + +D++ +Y +DI LDTFPYAG +T +LYMGVP VT+
Sbjct: 342 EML--EGLKLPMKRIYVRQGKNDYLGSYGDVDIMLDTFPYAGAASTATALYMGVPIVTLE 399
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G+ HA +G S+LT IA + Y ++A+ LA D+ A+ + R +LR + KSP+
Sbjct: 400 GTTHAGRLGASILTAARQTEWIAADTRAYERIAVGLAEDIAAVRSGRSALRTALEKSPLM 459
Query: 528 DGQNFALGLESTYRNMWHRY 547
D ++ + S + W +Y
Sbjct: 460 DVSSYTDNVWSAIESAWAKY 479
>gi|320529469|ref|ZP_08030555.1| conserved domain protein [Selenomonas artemidis F0399]
gi|320138263|gb|EFW30159.1| conserved domain protein [Selenomonas artemidis F0399]
Length = 483
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 192/371 (51%), Gaps = 22/371 (5%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IG+++P + S S F A L+ + Y V Y+ +AD T V +
Sbjct: 127 LRIGFIAPHFLDSSSSLFY-AGLMRGLREKYDVYAYALSDRADTFTESLCADVR-----Y 180
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANN-KLGMMACQPAPVQVTWIGYPNTTGLP 304
+ I ++ A +R D+ID+LV+L GHT L ++A +PAPVQ++ IG+ TTG+
Sbjct: 181 ASLENISIEEQAECIRTDEIDVLVDLGGHTEGGMTLMVLARRPAPVQISGIGWFATTGVS 240
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPE--AGPVCPTPALTNGFITFGS 362
+D +TD + P T++ + EEL+RLP F+ TP+ E A V P + +TFG
Sbjct: 241 FVDGFLTDEVLSPAGTEEYYSEELLRLPHAFVM-TPTAEMRAAEVSARP--VDEPVTFGV 297
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH--RFLSTLEQLGLESLRVD 420
N KI VL++W IL VP SRLV++ D+V R + LE L + +
Sbjct: 298 LQNFMKINEAVLKMWEHILKKVPKSRLVLQ------DAVDSPLRVTTILEMLDGMKMPMK 351
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ + D++ Y +DI+LDTFPYAG +T +LYMGVP V++ G HA +G S+L
Sbjct: 352 RIFVRRGKQDYLADYGDIDIALDTFPYAGGASTATALYMGVPVVSLRGETHAARLGASIL 411
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T G I +E Y Q+A+ LA + + R++LR + SP+ D + E
Sbjct: 412 TAAGYPEWIGADERAYEQIAVDLAGRIGEVRAGRVALRAQVETSPLMDEAAYLRAAEEAI 471
Query: 541 RNMWHRYCKGD 551
+W +GD
Sbjct: 472 ARIWAE--RGD 480
>gi|288957552|ref|YP_003447893.1| hypothetical protein AZL_007110 [Azospirillum sp. B510]
gi|288909860|dbj|BAI71349.1| hypothetical protein AZL_007110 [Azospirillum sp. B510]
Length = 888
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 194/382 (50%), Gaps = 26/382 (6%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR-EKVMKK 241
+R L +GY+S D+ H++ + + L HD + V YS + D +R R E+ +++
Sbjct: 496 DRRLRVGYLSSDFREHAMGHLMVDALETHDRSRFAVTAYSTGID-DGSALRRRFERSLER 554
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+ D+ + AA++ D +DILV+LTG T ++ ++A +PAPVQV W+GYP T
Sbjct: 555 ---FVDLRRHSDADAAAVIAADGVDILVDLTGFTTFSRTAILAARPAPVQVNWLGYPGTL 611
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECF---------LCYTPSPEAGPVCPTPA 352
G +DY + D P ++ E ++RLP+C+ TPS A C P
Sbjct: 612 GASFVDYILADPTVILPGEERFFTERVVRLPDCYQPNDRRRVIADATPSRAA---CGLP- 667
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQ 411
+GF+ F FN+ K+TP +L WARIL AVP+S L + P D++R E
Sbjct: 668 -EDGFV-FCCFNSTHKLTPALLDGWARILAAVPDSLLWLYAGNPQAADNLRREG----EA 721
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
G + R+ + L + +H+ + L D+ LDT PY TT ++L+ G+P +T G+
Sbjct: 722 RGNDPRRL-VFAAPLPHAEHLARHRLADLFLDTLPYNAHTTASDALWAGLPVLTRRGTTF 780
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A V SLL GL LI +++ Y A+ LA L +LR L + P+ D
Sbjct: 781 AGRVAASLLRAAGLPELIVEDQQAYEAAAISLARSPGRLRDLRHRLARALPTCPLFDTPR 840
Query: 532 FALGLESTYRNMWHRYCKGDVP 553
F LE+ YR MW + G P
Sbjct: 841 FTRHLEAAYRAMWDNHRSGAGP 862
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A NNL + L AV Y+ AL+++P+F + NL + ++ + + A +
Sbjct: 273 PSDPAARNNLANALRSLGRLRDAVVEYRAALALQPDFPVAEINLALALSILREAEGALAV 332
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI---DPDS 133
+ A P EA+ +G + DA LA+ A + + DP+S
Sbjct: 333 LRGLTARQPANDEAWRRMGRVLVDAVRPDLAVAALRNAIVLLPGDPES 380
>gi|46200779|ref|ZP_00056483.2| COG3914: Predicted O-linked N-acetylglucosamine transferase,
SPINDLY family [Magnetospirillum magnetotacticum MS-1]
Length = 673
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 161/587 (27%), Positives = 243/587 (41%), Gaps = 60/587 (10%)
Query: 15 DMAIVFYELAFHFNP--HCAEACN-NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNN 71
D+A+ Y+L N H A + N V ++A + A+ + P+F + N
Sbjct: 37 DLALQLYQLWIGLNRDHHLLYAAHFNYAVTLSAAGRPEQAKASLEKAIELNPDFYPAYIN 96
Query: 72 LGVVYTVQGKMDAAAEMIEK------AIAANPTYAE--AYNNLGVLYRDAGSISLAIDAY 123
LG G DAA + AI + + A + + + I A +
Sbjct: 97 LGGALEALGTPDAAVDTWNGLVTRLGAITGHGIRMKCTALKQIARVLEERQQIVAAENVL 156
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYIN---------EGHD------------------DKLF 156
Q L++D R ++ LLA + +G D D L
Sbjct: 157 RQSLELDNTQRENAEH-LLASRMVQCRWPVIEPFDGMDASLQMRSFSPLSLAAYTDDPLL 215
Query: 157 EAHRDW---GKRFMRLYSQYTSWDNTKDPERP-LVIGYVSPDYFTHSVSYFIEAPLVYHD 212
W K F R + + ER L IGYVS D H+V Y I HD
Sbjct: 216 HLASSWEHCNKMFGRRIPRLPPVQPAERTERTRLKIGYVSSDLKAHAVGYLIAEVFGLHD 275
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
++ Y A ++++ W DI G+ ++ A +RED IDILV+L
Sbjct: 276 RAKVEIFAYYC---GPAGEDPLKQRIRADFDHWIDITGMSDEAAANRIREDGIDILVDLN 332
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
GHT + + + A +PAPV V W+GYP T G Y I D PP + E+++RLP
Sbjct: 333 GHTKSARTRVFAMRPAPVNVNWLGYPGTMGTAYHHYIIADEWIIPPGREMYCSEKVVRLP 392
Query: 333 ECFLCYTPSPEAGPVCPTP------ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
CY + V P L + F FN+ KI+ + + W IL +VP
Sbjct: 393 ----CYQANDRKRAVASEPPSRTDLGLPEDAMVFCCFNSQQKISKMMFERWMHILNSVPG 448
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
S L + + ++ R E+ G+ R+ + L + DH+ + D+ LDTFP
Sbjct: 449 SVLWLLES---GEEIQGRLWDHAERCGIARDRL-IFGKRLASPDHLARMTQADLFLDTFP 504
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
Y TT ++L+M VP +T++G A VG SL GL L+ +EYV++A+ L +D
Sbjct: 505 YGAHTTASDALWMSVPILTLSGRSFASRVGGSLSRSAGLPELVCSTPEEYVEMAIALGND 564
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
T L R LR + + D LE Y MW + G +P
Sbjct: 565 RTRLQAYRDQLRAAKPNAVMFDTNLLVSRLEDLYAGMWADFMAGRLP 611
>gi|425464281|ref|ZP_18843603.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9809]
gi|389833751|emb|CCI21471.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9809]
Length = 721
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 188/374 (50%), Gaps = 16/374 (4%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
K P R + IGY++ HSV + YH+ +++ Y AD T +K
Sbjct: 355 KSPARKIKIGYIAHTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVTQAADEIT----QKWF 410
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
K + +++ A +R+DK+DILV++ T N +MA +PAP+QVTW+G +
Sbjct: 411 KNNSDYSYNLPAKIEQITAQIRQDKLDILVDIDSLTNNTTYLVMALKPAPIQVTWLGL-D 469
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN---- 355
+G+P IDY I D+ P ++ + E++IRLP +L E G PT T+
Sbjct: 470 ASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLS-VDGFEVG--VPTRRRTDLNIP 526
Query: 356 -GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQLG 413
I + + + K T ++ + +IL VPNS L++K F +++R FL + ++LG
Sbjct: 527 DDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKG--FADKETIRELFLKSADELG 584
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ R+ LP H + DI LDT+PY+G TTT E+L+MG+P VT G A
Sbjct: 585 ISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAA 644
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ + G+ IA +++EYVQ ++L + +R LR SP+ +G+ F
Sbjct: 645 RNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLNKNLREEVRYQLRQSRHTSPLWNGKKFT 704
Query: 534 LGLESTYRNMWHRY 547
+ +E Y +W +
Sbjct: 705 IDMEKAYEQIWQNH 718
>gi|78183698|ref|YP_376132.1| TPR repeat-containing protein [Synechococcus sp. CC9902]
gi|78167992|gb|ABB25089.1| TPR repeat [Synechococcus sp. CC9902]
Length = 724
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 231/466 (49%), Gaps = 24/466 (5%)
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144
A ++ +K ++ NP+ + + + G+ LAI + +I+ + + + QN L +
Sbjct: 260 ALQISKKGLSINPSNDNLRHAMSQCLAETGNPELAIKVMRE--EIEGEKKISEQN-LYNL 316
Query: 145 NYINEGHD----DKLFEAHRDW-----GKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDY 195
+I EG+ +KL DW KR L+ KD ER + +GY+S D+
Sbjct: 317 QFIGEGYQIIDSEKLKCMAEDWESIKIKKRIGPLWGDRIE---DKDKER-INVGYMSADF 372
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
H V FI+ + HD + KV+ + DA +E M G W D+ + +++
Sbjct: 373 CDHPVGRFIKPIIKEHDRKRVKVIGIDCGSRKDANNREIKE--MCNG--WIDVNNLSDQE 428
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDS-L 314
A + ID+L+EL G+TA N+LG++ +P +Q++++GY T L +ID I D L
Sbjct: 429 AARKIANHGIDVLIELGGYTAENRLGILIEKPGKIQLSYLGYFAPTYLKSIDGWIGDDIL 488
Query: 315 ADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVL 374
+ Q+ V +L ++ + ++ EA V L F FG FN+ K+T + +
Sbjct: 489 FESLNKTQRDVHKLYKIRDGYMAMELKTEA--VIKNTPLNRKF-RFGCFNHSRKLTYETI 545
Query: 375 QVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQA 434
+++A+++ P S + +K F + R ++ L + G+ RV L+P I H +
Sbjct: 546 RLFAKVMKENPESEIALKSISFSETEEQERIINLLNKNGISKKRVILMPYITDKIKHQEK 605
Query: 435 YSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNED 494
Y+ +D++LD PY G TTTCE+L MGVP +T+ G + S+L + I NE
Sbjct: 606 YNEIDVALDPIPYGGATTTCEALEMGVPVITLKGEGMVGRLSSSILKYGRCEEWIGNNET 665
Query: 495 EYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
EY+ ++++L + R+ L+ +SK+ + + + + LE Y
Sbjct: 666 EYINISVKLRKEGKRDEKKRIQLKAKLSKTDLTNQKRLSKQLEEAY 711
>gi|428179162|gb|EKX48034.1| hypothetical protein GUITHDRAFT_68991 [Guillardia theta CCMP2712]
Length = 493
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 190/377 (50%), Gaps = 15/377 (3%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGYVS D+ H + +++ L+ HD +++ +YS + + D+ +R+ + ++ +
Sbjct: 101 LRIGYVSADFVNHPTADLMQSALLLHDTSKFEIFLYS-ITRNDSSM--YRQVLQREIPNF 157
Query: 246 RDI-YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
R + ++K A M+ +D+IDILV L HTA + G+ A +PAP+QV ++ YP T G
Sbjct: 158 RLLPNAKNDKACAQMIADDEIDILVNLNSHTAGERNGIFAFRPAPLQVVYLAYPGTHGAS 217
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYT-----PSPEAGPVCPTP---ALTNG 356
+DY + D + P E ++ + E LI +P C+ + P + P+ L
Sbjct: 218 YLDYNVVDMVVSPKEHREMYTESLIYMPHCYQTNSFQDLYPEILSSSCLPSRKDHGLPEH 277
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+ F +FN L +IT + W RIL VPNS L + P R L + G+++
Sbjct: 278 ALVFCTFNRLGRITEHIFHAWIRILKRVPNSVLWLYKHPTMAVL---RLLRAAREQGIDA 334
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R ++ +H++ +L D+ LDT Y G TT + L+ GVP VT+ G VG
Sbjct: 335 TRFVFAGPMMPKIEHLKRLTLADVYLDTHIYNGHTTGSDFLWAGVPMVTLQGDTFPSRVG 394
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
SL VG++ +IA + Y + A++L ++ AL ++ L+ +P+ D +
Sbjct: 395 ASLARAVGMQEMIATDLAGYEEKAVELGNNKEALEEMKAKLKAARLTAPLFDTARWVGSF 454
Query: 537 ESTYRNMWHRYCKGDVP 553
E MW R+ +G P
Sbjct: 455 EDALTRMWERHARGLEP 471
>gi|171058438|ref|YP_001790787.1| hypothetical protein Lcho_1755 [Leptothrix cholodnii SP-6]
gi|170775883|gb|ACB34022.1| Tetratricopeptide TPR_2 repeat protein [Leptothrix cholodnii SP-6]
Length = 647
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 245/552 (44%), Gaps = 35/552 (6%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
+ A+ + A P E N GV+ ++ +A++ +Q L IKP +L N V
Sbjct: 111 EAALQSLDRALAIQPDYTEVLINSGVLLRELLRHAEALQRFQRVLEIKPQHETALANCAV 170
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL--GVLYR-DAGSISLAIDAYEQCLKIDP 131
+ T + + A M E+ +A NP Y L L+R D + DA ++
Sbjct: 171 LLTDFKRSEEATAMFERLLAINPDYDYGLGMLCYERLHRCDWTDFDASADAILAGVR--- 227
Query: 132 DSRNAGQNRLLAMNYINEGHDD-----KLFEAHRDWGKRFMRLY--SQYTSWDNTKDPER 184
+ R + ++ LA+ +++ D + F AHR Y S W +
Sbjct: 228 EGRRSSKS--LAVMALSDSAADHQTCARTFSAHR---------YPPSAQPLWRGERYRHD 276
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
+ I YVSPD H V + + HD ++ + S + + R R +++
Sbjct: 277 RIRIAYVSPDLREHPVGHLMAGIFERHDKNRFETIAISLGIDDGS---RLRSRMLASFDH 333
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
+ D + +++A+ +RE ++DI ++L G+TA+++ + A +PAP QV ++GYP T G
Sbjct: 334 FIDARLMGSRQIASRMREMEVDIAIDLAGYTADSRSEIFAERPAPAQVNYLGYPGTLGNG 393
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP---ALTNGFITFG 361
+DY + D PPE + + E ++ LP+ +L + P+ L + F
Sbjct: 394 YMDYIVADRHVIPPEHQGFYDERVVYLPDNYLPAASGVQIAERTPSRTECGLPESGLVFC 453
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL-GLESLRVD 420
SFN+ KI+P + W RIL A P S L + + + R L Q G+ R+
Sbjct: 454 SFNHDYKISPHIFAAWMRILAATPGSVLWLMSR----GAASQRNLRAAAQAQGVAPERLV 509
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ DH+ Y D+ LDT PY TT ++L G+P +T +G+ V SLL
Sbjct: 510 FAQRVPRVEDHLARYRQADLFLDTHPYNAHTTAADALLAGLPVLTYSGNAFPARVAGSLL 569
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
GL L+ + +Y LA++LA LA+ + L + + D F LE+ Y
Sbjct: 570 HAAGLPDLVTHSLSDYEALAVRLAQQPALLADCKARLAAQRERCALLDADGFTRNLEAIY 629
Query: 541 RNMWHRYCKGDV 552
MW G V
Sbjct: 630 IAMWRNSQLGGV 641
>gi|30250032|ref|NP_842102.1| TPR repeat-containing glycosyl transferase [Nitrosomonas europaea
ATCC 19718]
gi|30139139|emb|CAD86003.1| Glycosyl transferases group 1:TPR repeat [Nitrosomonas europaea
ATCC 19718]
Length = 1189
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 266/594 (44%), Gaps = 73/594 (12%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE----MIEKA 92
NLGVI +NL ++E +Q AL++ P F Q+ NLG+ QG +AA E ++E A
Sbjct: 84 NLGVILFAENNLIDSIEAFQKALALSPAFPQARINLGLALERQGNAEAAIEQWQAVVENA 143
Query: 93 IA------ANPTYAE-------AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
I P A+ A NN+G L A A E+ L++DPD +A +
Sbjct: 144 ITPEADQNTGPNQADQIKNLTMALNNIGRLQETRRQYQAATQALEKSLQLDPDQPDAIHH 203
Query: 140 RL-----------------------------LAMNYINEGHDDKLFEAHRDWGKRFMRLY 170
+ LAM I++ + +L A ++ +R +
Sbjct: 204 LIFQRQKQCQWPVYAPVGKVTEAVLHEHTSALAMLNISDAPEAQLTAA-LNYSRRKIPAD 262
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
S N ++ + + Y S D+ TH V+ +HD ++ + D
Sbjct: 263 LPRLSPANGYRHDK-IRVAYCSSDFCTHPVAMLTVELFEHHDKNRFETYAF-CWSPDDGS 320
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
T+R ++++ + ++G + +VA ++R+ +IDIL++L G T+ K M+A +PAP+
Sbjct: 321 TLR--QRILSAVDHYIPVHGKSDDEVAQLIRQHEIDILIDLQGQTSGAKTRMLAMRPAPM 378
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPV--- 347
Q+T++G P TTGLP IDY I D P E + + E+ + +P+ + E P
Sbjct: 379 QITYLGLPATTGLPGIDYVIADRYLIPEEYARFYSEKPLYMPDVYQVSDRKREHSPAPTR 438
Query: 348 --CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHR 404
C PA F+ F SFNN K T +V W IL VPNS L ++ P+ R
Sbjct: 439 KDCGLPA--RKFV-FCSFNNNHKYTLEVFTTWMNILRRVPNSVLWLLADNPWA----REN 491
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
+ G++ R+ + + D++ Y + D+ LDTFP+ TT ++L+MG+P +
Sbjct: 492 LQKQAKAQGIDPKRL-VFAERTMPADYLARYLVADLFLDTFPFNAGTTANDALWMGLPVL 550
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
TM+G A + +LLT L LI + Y A+ LA+D A +R L
Sbjct: 551 TMSGRSFASRMAGALLTAADLPELITHDLQTYEDKAVALAADAKARKTMRQKLALAKESG 610
Query: 525 PVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSEPTK 578
P+ D F LE Y + V L+ EP+K EP +
Sbjct: 611 PLFDSLRFTRNLEQQYIAL--------VSELQNPSQHINISAQPEPTKLGEPAQ 656
>gi|255621125|ref|XP_002540177.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223498479|gb|EEF22206.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 269
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 160/271 (59%), Gaps = 15/271 (5%)
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
WR + + ++ +A +R+D+ID+L++L+GHT+ N+L A +PAPVQ +W+GY NTTGL
Sbjct: 8 WRMVSSVSDEALAETIRQDQIDVLIDLSGHTSGNRLLTFARKPAPVQASWLGYLNTTGLT 67
Query: 305 TIDYRITD-SLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSF 363
+IDY + D +L + Q+ E+L++LP + P P+A V PAL+NG+ITFG F
Sbjct: 68 SIDYYLADRALLPAGQFDQQFTEQLVQLP-VNAPFVPHPQAPAVNVLPALSNGYITFGCF 126
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVK--CKPFCCDSVRHRFLS---TLEQLGLESLR 418
N KIT +Q WA ++ +SR+V+ + C V+ F T ++L + R
Sbjct: 127 NRPNKITQATVQQWAAVMQIFSDSRMVLGGMAEAGACAHVQQWFAEAGITADRLSFYA-R 185
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
D+L ++Q Y L+DI LDTFP G TTT +L+MGVP + +AG A ++
Sbjct: 186 TDML-------SYLQQYHLVDICLDTFPSNGVTTTAHALWMGVPTLCVAGDRLASRGAMA 238
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTA 509
L+ +GL IA + YVQ + Q+ SD+ A
Sbjct: 239 LMQHLGLNDYIAASPSHYVQQSAQVLSDLQA 269
>gi|299135117|ref|ZP_07028308.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
gi|298590094|gb|EFI50298.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
Length = 732
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 162/585 (27%), Positives = 264/585 (45%), Gaps = 57/585 (9%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
YE A +P EA LG I ++ A+ Q AL++ P +++ + ++
Sbjct: 165 YERAATLHPSAPEAWIGLGDIACKNRDIKAALAHTQKALTLAPKSAEACLLQARLLEMRF 224
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN-AGQ- 138
+ A I++A+AA P EA + A S I E+ ++ +P++ GQ
Sbjct: 225 LHEEALIAIKQALAAAPDLVEADILRSRILFTAKRYSETIPILERIIRSNPETVGIKGQL 284
Query: 139 ---------------NRLLAMNYINEG------HDDKLFE-----------AHRDWGKRF 166
+RL + I E +D + AH G F
Sbjct: 285 FVSKMMTCNWDRYEKDRLACVRAIEENPAHITPYDSVIVTQAPAQHLACAVAHTKRG--F 342
Query: 167 MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVK 226
++ T W + IGYVSPD+ H+V + I +HD +++++ +S
Sbjct: 343 PKIE---TVWRGPLYAHEKIRIGYVSPDFREHAVGHVIADLFGHHDKRHFELYGFSTA-- 397
Query: 227 ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
AD +R R K I DI + ++ A +R+ +IDIL++L GHT + L MA +
Sbjct: 398 ADESALRARIKSTFHHFI--DIGSMTHEQAAQCIRDHEIDILIDLAGHTVHTGLDAMAFK 455
Query: 287 PAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP 346
P+P+QVTW+G+P TTG P +DY + D P E + E+++RLP+ Y P+ A
Sbjct: 456 PSPIQVTWLGFPGTTGAPFMDYILADPTVIPAEHAPFYSEKIVRLPD---TYQPNDGALK 512
Query: 347 VCPTPA-----LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD-S 400
V +P+ L + F FNN KITP+V +W R+L V S L + F + +
Sbjct: 513 VADSPSREDVGLPASGLVFCCFNNTFKITPEVFDIWMRLLGQVEGSVLWL----FEGNAT 568
Query: 401 VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG 460
+ + G+ R+ PL ++ L D+ LD + G +T ++L G
Sbjct: 569 AKANLIKEAVARGISPERLVFAPLADYA-TYLARTQLADLFLDNNYWNGHSTASDALRCG 627
Query: 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDL 520
VP +T G+ A V SLL + + LI + ++Y LAL+LA D LA + L
Sbjct: 628 VPVITCQGTSFASRVASSLLRAIEMPELITTSLEDYEALALKLACDPALLAATKDKLARN 687
Query: 521 MSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQV 565
+P+ D F LE+ Y M+ R +G+ P+ +E L ++
Sbjct: 688 RLTAPLFDTARFTRHLEAAYVTMYERAQRGEPPASFAVEALPSKI 732
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LGVI R NL + + AL + P ++ NLG + G + A + + K+I+ NP
Sbjct: 46 LGVIEGQRGNLAEGIRQITKALRLDPKSPEAYLNLGRMQGEAGDLSNAEKSLRKSISLNP 105
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+ A AY NL +YR A A +Q L+IDP+ A NR
Sbjct: 106 SNALAYGNLAAVYRRMKRYEEAKTAADQALRIDPNEWMALINR 148
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG GE A + NP A A NL +Y+ ++A AL I
Sbjct: 79 NLGRMQGEAGDLSNAEKSLRKSISLNPSNALAYGNLAAVYRRMKRYEEAKTAADQALRID 138
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN +L N G +D A E+A +P+ EA+ LG + I A+
Sbjct: 139 PNEWMALINRGNALLALNLLDDAKADYERAATLHPSAPEAWIGLGDIACKNRDIKAALAH 198
Query: 123 YEQCLKIDPDSRNAG--QNRLLAMNYINE 149
++ L + P S A Q RLL M +++E
Sbjct: 199 TQKALTLAPKSAEACLLQARLLEMRFLHE 227
>gi|78779585|ref|YP_397697.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
9312]
gi|78713084|gb|ABB50261.1| TPR repeat [Prochlorococcus marinus str. MIT 9312]
Length = 632
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/544 (23%), Positives = 264/544 (48%), Gaps = 21/544 (3%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + ++ + + A+ ++ +A +F P N+G I+ D ++A++ Y+ ALSIK
Sbjct: 95 LGNYFTKVGQINNALNYFHMAVNFTPDLYGVYINIGNIFSDLGRNEEALKNYEKALSIKN 154
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+F +L N+G + + + A + KA++ + ++ L +Y + +I ++ +
Sbjct: 155 DFPSTLYNIGNILFNKKDFNGAEKYFLKALSFEKNHVKSKIGLISIYSETFNIK-SLRNF 213
Query: 124 EQCLKIDPDSRNAGQN-RLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
+ +K + +N + RL+ Y++ + A K F + Q + K
Sbjct: 214 KSFIK-NVGIKNGDEICRLMTFFYLDSSPQKQYLRAQNFSKKVFGDI--QKINKMPIKIN 270
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
++ + +GY+S ++ H V +++ HD ++++ Y D T +KV K
Sbjct: 271 KKKIRVGYISSNFNDHPVLKVMDSIFKGHDKTSFEIYAYYLFKNDDDNT----KKVKKYF 326
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+++I + K++ ++R D++DI V+L G+T NK + + AP+Q+ ++G+ TT
Sbjct: 327 DSFKNIASLSNKEMIKIIRSDELDIAVDLMGYTNRNKANIFNSRIAPIQINYLGFAGTTC 386
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLC-----YTPSPEAGPVCPTPALTNGF 357
+P +D+ I D P + + + E++I +P CF+ Y+ S E+ + P
Sbjct: 387 IPNMDFLIADKFVIPKKNMKFYSEKIIYMPNCFINSIKYQYSNSKESIKLNLPPKS---- 442
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I +F+ K++ +V+ W ++L N+ L +K + +S + ++
Sbjct: 443 IVLAAFHMAFKLSEEVVNSWIKVLNQTENTYLWLKI---SNKLAKKNLISHFQSKNVDLK 499
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ + L +H+ YS D+ LDTF + G +T E ++ +P +T+AG A VG
Sbjct: 500 RILFAEKVDLYTEHISRYSKADLFLDTFNFNGHSTLVECIWSELPFITLAGESFASRVGA 559
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S+L +GL LIAK+ DEY++ + + LA ++ +R + + + F LE
Sbjct: 560 SILHSLGLSELIAKSTDEYIEKVIFYTKNSHKLALIKNQIRKQKKEGDFFNQKLFVNQLE 619
Query: 538 STYR 541
Y+
Sbjct: 620 EKYK 623
>gi|443657013|ref|ZP_21131812.1| hypothetical protein C789_2352 [Microcystis aeruginosa DIANCHI905]
gi|159029887|emb|CAO90941.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333290|gb|ELS47857.1| hypothetical protein C789_2352 [Microcystis aeruginosa DIANCHI905]
Length = 726
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 188/375 (50%), Gaps = 16/375 (4%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
K P R + IGY++ HSV + YH+ +++ Y AD T EK
Sbjct: 355 KSPARKIKIGYIAHTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEIT----EKWF 410
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ +++ A +R+D +DILV++ T N ++A +PAP+QVTW+G +
Sbjct: 411 INNSDYSYNLPAKIEEITAQIRQDNLDILVDIDSLTNNTTYLVIALKPAPIQVTWLGL-D 469
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN---- 355
+G+P IDY I D+ P ++ + E++IRLP +L E G PT T+
Sbjct: 470 ASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLS-VDGFEVG--VPTRRRTDLNIP 526
Query: 356 -GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQLG 413
I + + + K T ++ + +IL VPNS L++K F +++R FL + ++LG
Sbjct: 527 DDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKG--FADKETIRELFLKSADELG 584
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ R+ LP L H + DI LDT+PY+G TTT E+L+MG+P VT G A
Sbjct: 585 ISQDRLRFLPNDLHEETHRANLGIADIILDTYPYSGATTTLETLWMGIPLVTRVGEQFAA 644
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ + G+ IA +E+EYVQ ++L D +R LR SP+ + + F
Sbjct: 645 RNSYTFMKNAGISQGIAWSEEEYVQWGIKLGLDKNLREEVRYQLRQSRHTSPLWNAKQFT 704
Query: 534 LGLESTYRNMWHRYC 548
LE+ Y+ MW+ Y
Sbjct: 705 RDLETAYQQMWNIYS 719
>gi|338739161|ref|YP_004676123.1| hypothetical protein HYPMC_2335 [Hyphomicrobium sp. MC1]
gi|337759724|emb|CCB65555.1| TPR repeat-containing protein [Hyphomicrobium sp. MC1]
Length = 835
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 152/618 (24%), Positives = 271/618 (43%), Gaps = 58/618 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+L E +F+ A A NP A+ NL + Y+ A+ YQ L+I
Sbjct: 234 HLATYLRENRRFEEAADLGRRAIVANPGVADYHFNLALSYEGLGYRHDALASYQSGLAID 293
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN ++ +G++ + A + +E AI +P A AY +L ++ + + A A
Sbjct: 294 PNRAEGYACVGMLLSSMNMHAGAVQALEHAIKLDPKLANAYYSLAIVQKQRENYDEARAA 353
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYIN-----EGHDDK------LFEAHR----------- 160
+++CL+ PD A NR +N +G D++ +F
Sbjct: 354 FQKCLECAPD---AIVNRFEFINLRRLICDWDGVDEEERVCLEIFRTRNVSIAPFQLIAL 410
Query: 161 --------DWGKRFMRLY-----SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAP 207
+ + R + S++TS+ + + + +G+VS D+F H+ +
Sbjct: 411 RASPADQLKAAQSYTRTFDVPPSSRFTSYRSRLGAGQRIRVGFVSCDFFEHATAMLFAEV 470
Query: 208 LVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
L D +++ Y + ++ T R+++++ + I + + VA + +D IDI
Sbjct: 471 LERLDRSRFEIFGYCHSPEDNSAT---RQRLLRSFEHLKKIGTMRNRDVAQSIHDDAIDI 527
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
LV+L G+T + + + A + AP+QV ++GYP T G IDY I D++ P ++ + E+
Sbjct: 528 LVDLKGYTRDARSEIFAYRAAPIQVNYLGYPGTMGAGFIDYLIADAMVAPMGAQEFYTEQ 587
Query: 328 LIRLPECFLCYTPSPEAGPVCPTP------ALTNGFITFGSFNNLAKITPKVLQVWARIL 381
++ LP Y P+ + P L F SFNN K+ + VW +L
Sbjct: 588 IVHLPHS---YQPNDRQRLISDAPMSRADFGLPEDAFVFCSFNNSYKLNATMFDVWMPLL 644
Query: 382 CAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
VP S L ++ C +++R E G++ R+ + + +H+ + D+
Sbjct: 645 QKVPGSVLWLLVPNTTCAENLRRE----AEARGVDPSRLVFAKRMPIA-EHLARHRFADL 699
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LD P TTT ++L+ G+P +T G A V SLL+ + L LI N +Y LA
Sbjct: 700 FLDALPCNAHTTTTDALWAGLPVLTCLGDTFAGRVAASLLSAIELPELITTNLADYSDLA 759
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRMEM 560
L+LA + T L +R L +P+ D + LE ++ M GD P + +
Sbjct: 760 LELAQNKTKLGAIRQKLAANRESAPLFDPARYTRNLERSFEMMLDIKRAGDAP--RPFTV 817
Query: 561 LQQQVVSEEPSKFSEPTK 578
++ + PS P +
Sbjct: 818 IETEATDIAPSPIKIPAE 835
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 48 LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
LD++ ++ LS+ P SL++LG++ + ++ A + I +++ A P Y EA+ NL
Sbjct: 41 LDESEIAHRRVLSLVPEHPPSLHHLGLIAFQRRDLEGAVDFIRQSVTAKPDYHEAWLNLA 100
Query: 108 VLYRDAGSISLAIDAYEQCLKIDPDSRN 135
++ + AI+A +CL + P + N
Sbjct: 101 IILGELSRSKEAIEACRECLALQPGNAN 128
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + + + P + ++LG+I R +L+ AV+ + +++ KP++ ++ NL
Sbjct: 40 RLDESEIAHRRVLSLVPEHPPSLHHLGLIAFQRRDLEGAVDFIRQSVTAKPDYHEAWLNL 99
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
++ + A E + +A P A + LG L R A + + A+ AY L + P+
Sbjct: 100 AIILGELSRSKEAIEACRECLALQPGNANGHAILGNLLRVANNDAEAMTAYLNALNLKPN 159
>gi|222147876|ref|YP_002548833.1| hypothetical protein Avi_1161 [Agrobacterium vitis S4]
gi|221734864|gb|ACM35827.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 637
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 190/385 (49%), Gaps = 21/385 (5%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA-DAKTIRFREKVMKK 241
E+PL IGY+S D+ H+ L+ HD +++ ++ K A E++ ++
Sbjct: 260 EQPLHIGYLSSDFHAHATMTLFLDSLLAHDRSRFRITLFCYTAKTYSADQQAMPEQLRRE 319
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
RD+ +++ A + K+DILV+L GHT +LG++ APV+ T++G+P
Sbjct: 320 LVSLRDL---SDEEAAGEIDRRKVDILVDLKGHTPGARLGIVNLSSAPVKATYLGFPGPV 376
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGF---- 357
+DY ITD + P + + E+ RLPEC+ + + P P+ +G
Sbjct: 377 SGVDLDYAITDPVVTPDSAEAFYQEKFCRLPECYQANSAASRPQPR-PSRRADHGVPEHA 435
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV-RHRFLSTLEQLGLES 416
F SFN + KITP+ + +WAR+L A P+S L + C D++ R + G++
Sbjct: 436 FVFASFNGVHKITPQTMSLWARVLRAAPDSLLWM----LCPDAIARTNLEAAFVAEGIDP 491
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ L DH+ L D++LDTFP G TTT + L+ G+P +T G A V
Sbjct: 492 ARI-LFAAKQDYGDHVHRLPLADLALDTFPCNGHTTTSDMLWGGLPVLTKRGHCFAGRVS 550
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
SLL VGL L+A +E+ +V LA +LA +A L+ L +P+ D F L
Sbjct: 551 ESLLKAVGLDQLVADDEEAFVSLAAELARQPDKIAALKNHLATSRHAAPLFDTLRFTQHL 610
Query: 537 ESTYRNMWHRYCKG------DVPSL 555
E Y M R G DVP+L
Sbjct: 611 ERAYEMMAERARAGLAPARIDVPAL 635
>gi|158521101|ref|YP_001528971.1| hypothetical protein Dole_1087 [Desulfococcus oleovorans Hxd3]
gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 808
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 147/559 (26%), Positives = 253/559 (45%), Gaps = 36/559 (6%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + A+ + A +P AE L Y R +A+ ++ AL + P+ +++ +
Sbjct: 259 RIEEAVPVFLAAIRVSPEKAELHGALATAYSIRGATSQAMASFEKALELDPDSARTRFSY 318
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYA--------EAYNNLGVLYRDAGSISLAIDAYE 124
G + G + A E + +A +P +A + LG+ ++ + E
Sbjct: 319 GNLLESSGNREGALEAYRRVMALDPDFATQVFYYQFQLEIKLGMWEHYEKKVAELVRRTE 378
Query: 125 QCLKIDPDSRNAGQNRLLAMNYIN-EGHDDKLFEAHRDWGKRFMRLYSQYTS-------W 176
L ++ + L +NY GH H+ R +L + +
Sbjct: 379 DYLALEKPPYDLSP---LILNYFPVPGH------MHKAVATRKAKLIDDNMASARAAFAF 429
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
+ K+ L IGY+SPD+ H+V I +HD +N+++ YS +V D T R
Sbjct: 430 VHPKNAFGRLRIGYLSPDFREHAVGIVINDIFKHHDTENFEIFAYS-LVDVDDDTSR--- 485
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
K+ + + D+ + +K AA++ D IL++L G+T ++ ++A +PAP+Q + IG
Sbjct: 486 KLKTECEHFVDVSKVSPRKAAAIIYNDHPHILIDLAGYTTFSRPEVLALRPAPIQASAIG 545
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-LTN 355
YPNT G IDY + D P E + + E ++RLP F + P+ + A L
Sbjct: 546 YPNTMGAGFIDYILADRWLIPEEMQDAYTERVVRLPHAFPSSAFAISDKPMTRSDAGLPE 605
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
F FN + K+ P+ W IL N+ L + D++R R G++
Sbjct: 606 AGFVFCCFNAVYKMEPETFGAWMEILREADNAVLWLSA---ASDAIRQRLTDRAVAHGVD 662
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHN 474
+ R+ + L + ++M Y L D+ LDTF Y AG+T C +L+ GVP +T G +A
Sbjct: 663 AGRL-VFAEKLPHPEYMARYQLADLFLDTFLYTAGSTAVC-ALHGGVPVLTRTGPTNASR 720
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
+G S+ G++ I + + Y+Q A+ LA A L+ L +P+ D +
Sbjct: 721 MGASICAAAGMEETICPDTEAYIQRAVHLARHPEEAAALKEKLAANQKTAPLFDPAAYTR 780
Query: 535 GLESTYRNMWHRYCKGDVP 553
G+E+ R MW RY G P
Sbjct: 781 GVEAACRKMWERYESGQSP 799
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+NLG + D A F+E + PH A NNLG + + + D A+ C++ L I
Sbjct: 112 FNLGKISKAAGRADEAKTFFEKTLNLAPHHLAARNNLGNLLQQAGDNDGALACFEAVLKI 171
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P +++ N+G ++ ++ +++ AA E+AIA NP + Y L ++ LA
Sbjct: 172 NPRQAEAHYNIGNIHKLREEVEPAARYYEQAIACNPGFVPPYIGLARIHLANRRNDLAES 231
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEG 150
+ L++DP +N LA Y+ EG
Sbjct: 232 LIRKALRMDP--KNGEALSELANLYLREG 258
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A N+LG + + D+A +Q A+S+ P +Q+ NLG + G+ D A
Sbjct: 71 PKQAAFHNSLGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAGRADEAKTF 130
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
EK + P + A NNLG L + AG A+ +E LKI+P A N
Sbjct: 131 FEKTLNLAPHHLAARNNLGNLLQQAGDNDGALACFEAVLKINPRQAEAHYN 181
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + D A+ +E NP AEA N+G I+K R+ ++ A Y+ A++
Sbjct: 147 NLGNLLQQAGDNDGALACFEAVLKINPRQAEAHYNIGNIHKLREEVEPAARYYEQAIACN 206
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F L ++ + D A +I KA+ +P EA + L LY G I A+
Sbjct: 207 PGFVPPYIGLARIHLANRRNDLAESLIRKALRMDPKNGEALSELANLYLREGRIEEAVPV 266
Query: 123 YEQCLKIDPD 132
+ +++ P+
Sbjct: 267 FLAAIRVSPE 276
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
D A ++ A +P A+A NLG I K D+A ++ L++ P+ + NNLG
Sbjct: 91 DEAAAAFQRAVSLDPGLAQAHFNLGKISKAAGRADEAKTFFEKTLNLAPHHLAARNNLGN 150
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+ G D A E + NP AEA+ N+G +++ + A YEQ + +P
Sbjct: 151 LLQQAGDNDGALACFEAVLKINPRQAEAHYNIGNIHKLREEVEPAARYYEQAIACNP 207
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++N VA + A Y NP+ A+A + LG I + +L A + A+
Sbjct: 9 LFNKAVALHRAGSLEGAETLYRDLLRENPNHADALHLLGTIMAAKKDLVAAEGTLRKAVE 68
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P + N+LG V +G+ D AA ++A++ +P A+A+ NLG + + AG A
Sbjct: 69 KAPKQAAFHNSLGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAGRADEAK 128
Query: 121 DAYEQCLKIDPDSRNAGQN 139
+E+ L + P A N
Sbjct: 129 TFFEKTLNLAPHHLAARNN 147
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
D+A A +P EA + L +Y +++AV + A+ + P ++ L
Sbjct: 227 DLAESLIRKALRMDPKNGEALSELANLYLREGRIEEAVPVFLAAIRVSPEKAELHGALAT 286
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
Y+++G A EKA+ +P A + G L +G+ A++AY + + +DPD
Sbjct: 287 AYSIRGATSQAMASFEKALELDPDSARTRFSYGNLLESSGNREGALEAYRRVMALDPD 344
>gi|259907619|ref|YP_002647975.1| hypothetical protein EpC_09460 [Erwinia pyrifoliae Ep1/96]
gi|387870378|ref|YP_005801748.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
SPINDLY [Erwinia pyrifoliae DSM 12163]
gi|224963241|emb|CAX54725.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
gi|283477461|emb|CAY73377.1| probable UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase SPINDLY [Erwinia
pyrifoliae DSM 12163]
Length = 1127
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 254/549 (46%), Gaps = 62/549 (11%)
Query: 18 IVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYT 77
I+F+ L + +E L +Y +L + C Q A+ + + ++ + +Y+
Sbjct: 613 ILFHHL-LKLDDANSELWLKLSGLYNSAHDLAREERCLQKAIQRDADNAINMLRMATLYS 671
Query: 78 VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137
G+++ A + KA+ G +S A Q + + S +A
Sbjct: 672 HTGRLEEAKALCRKALK-------------------GQLSAFTRANAQAMYVFILSHDAA 712
Query: 138 QNRLLAMNYINEGHDDKLFEAHRDWGK---RFMRLYSQYTSWDNTKDPERPLVIGYVSPD 194
++ F AHR +G+ R+ R +D + IG+VS D
Sbjct: 713 LTA------------EEKFLAHRQFGQLAQRWARAVMPTNRLQQPRDEREKIRIGFVSGD 760
Query: 195 YFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEK 254
+H V +F+ + + Y++ Y A K DA T E ++R + ++
Sbjct: 761 LNSHPVHHFVWPVWKTLNRERYELYAY-ATGKEDAVT----EGYQSSASVFRHVAALNAV 815
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT-DS 313
++A + +D ID+L++L+G T N+L A +PAP+Q++WIG+ TTGL +DY I
Sbjct: 816 ELARQISQDGIDVLIDLSGFTNGNRLLSFALKPAPIQMSWIGFVGTTGLQEMDYYIVYHG 875
Query: 314 LADPPETKQKHVEELIRLP--ECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITP 371
+A+P E E+L+ LP + F Y +P + P PAL NG +T G+FN K+TP
Sbjct: 876 MAEPGELDSIFSEKLVSLPSAKLFEYYATAP---AINPLPALKNGHLTLGNFNRPQKLTP 932
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCD-SVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430
++L WA IL A+P++RL+ F D + R+L+ + + G++ + L +
Sbjct: 933 ELLDCWANILLALPDARLLFG---FMADQQMSDRYLAEMTRRGVKPEQ-----LAFRSKQ 984
Query: 431 HMQAYSLM----DISLDTFPYAGTTTTCESLYMGVPCVT-MAGSVHAHNVGVSLLTKVGL 485
+ AY M DI LD+ PY+ TT +++MGVP +T + GS + +++ T + L
Sbjct: 985 NFAAYMAMHQEVDILLDSHPYSAGTTAQHAVWMGVPLITAIEGSAVSRTTAMAMKT-LNL 1043
Query: 486 KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
+ + DEY Q + S AL +R S+R +++ N A E +W
Sbjct: 1044 DEFVCHSLDEYAQKVIAWNSRYQALDAIRRSMRARIAQRENAHSHN-AYYFEQMIDAVWQ 1102
Query: 546 RYCKGDVPS 554
R+ G P+
Sbjct: 1103 RHLAGQPPA 1111
>gi|414077428|ref|YP_006996746.1| hypothetical protein ANA_C12192 [Anabaena sp. 90]
gi|413970844|gb|AFW94933.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 733
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 190/369 (51%), Gaps = 8/369 (2%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+RPL IGYVS + +HSV Y L YH+ Q + + +YS +K + ++ + + G
Sbjct: 368 KRPLRIGYVSECFRSHSVGYLAWWLLKYHNRQEFDIHLYS--LKENIYDLQQQAYQNEFG 425
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+ + +A + ED+IDILV+L T+ ++A +PAP+QVTW+GY + TG
Sbjct: 426 DHFHQLCP-PIVTIADKINEDEIDILVDLDSLTSYGNCAILALKPAPIQVTWLGY-DATG 483
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL---TNGFIT 359
LP +DY I D+ P + + E++ RLP+ ++ P +L +G I
Sbjct: 484 LPGVDYFIADNYVLPASAQDYYTEKIWRLPQNYIGIDGFTVGTPTISRESLDIPNDGIIY 543
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
F S + L + P +++ +I+ VPNS ++K + +++ E GL+
Sbjct: 544 FSSQSGLKR-NPDNIRLQMQIIKQVPNSYFLLKTSRSNHEDMQNFIAPLAEAQGLDLECF 602
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
LP +H ++ DI LDT+PY G TTT E+L+MGVP VT G A ++
Sbjct: 603 RFLPTAPTEMEHRANLAIADIVLDTYPYNGATTTLETLWMGVPIVTRVGEQFAARNSYTM 662
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+ VG+ +A +++EYV+ ++L D + LR SP+ +GQ FA +E+
Sbjct: 663 MMNVGVTEGLAWSDEEYVEWGVRLGKDEKLRQEIVWKLRKSRQTSPLWNGQKFAREMENA 722
Query: 540 YRNMWHRYC 548
Y+ MW RY
Sbjct: 723 YQQMWQRYI 731
>gi|425458862|ref|ZP_18838348.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9808]
gi|389823716|emb|CCI27872.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9808]
Length = 721
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 185/372 (49%), Gaps = 16/372 (4%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
K P R + IGY++ HSV + YH+ +++ Y AD T EK
Sbjct: 355 KSPARKIKIGYIAHTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEIT----EKWF 410
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ +++ A +R+D +DILV++ T N +MA +PAP+QVTW+G +
Sbjct: 411 INNSDYSYNLPAKIEQITAQIRQDNLDILVDIDSLTNNTTYLVMALKPAPIQVTWLGL-D 469
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN---- 355
+G+P IDY I D+ P ++ + E++IRLP +L E G PT T+
Sbjct: 470 ASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLS-VDGFEVG--VPTRRRTDLNIP 526
Query: 356 -GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQLG 413
I + + + K T ++ + +IL VPNS L++K F +++R FL + ++LG
Sbjct: 527 DDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKG--FADKETIRELFLKSADELG 584
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ R+ LP L H + DI LDT+PY+G TTT E+L+MG+P VT G A
Sbjct: 585 ISQDRLRFLPNDLHEETHRANLGIADIILDTYPYSGATTTLETLWMGIPLVTRVGEQFAA 644
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ + G+ IA +E+EYVQ ++L D +R LR SP+ + + F
Sbjct: 645 RNSYTFMKNAGISQGIAWSEEEYVQWGIKLGLDQNLREEIRYQLRQSRHTSPLWNAKQFT 704
Query: 534 LGLESTYRNMWH 545
+ +E Y +W
Sbjct: 705 IDMEKAYEQIWQ 716
>gi|440755492|ref|ZP_20934694.1| O-linked N-acetylglucosamine transferase SPINDLY family-like
protein [Microcystis aeruginosa TAIHU98]
gi|440175698|gb|ELP55067.1| O-linked N-acetylglucosamine transferase SPINDLY family-like
protein [Microcystis aeruginosa TAIHU98]
Length = 721
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 185/372 (49%), Gaps = 16/372 (4%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
K P R + IGY++ HSV + YH+ +++ Y AD T EK
Sbjct: 355 KSPARKIKIGYIAHTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEIT----EKWF 410
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ +++ A +R+D +DILV++ T N +MA +PAP+QVTW+G +
Sbjct: 411 INNSDYSYNLPAKIEQITAQIRQDNLDILVDIDSLTNNTTYLVMALKPAPIQVTWLGL-D 469
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN---- 355
+G+P IDY I D+ P ++ + E++IRLP +L E G PT T+
Sbjct: 470 ASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLS-VDGFEVG--VPTRRRTDLNIP 526
Query: 356 -GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQLG 413
I + + + K T ++ + +IL VPNS L++K F +++R FL + ++LG
Sbjct: 527 DDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKG--FADKETIRELFLKSADELG 584
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ R+ LP L H + DI LDT+PY+G TTT E+L+MG+P VT G A
Sbjct: 585 ISQDRLRFLPNDLHEETHRANLGIADIILDTYPYSGATTTLETLWMGIPLVTRVGEQFAA 644
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ + G+ IA +E+EYVQ ++L D +R LR SP+ + + F
Sbjct: 645 RNSYTFMKNAGISQGIAWSEEEYVQWGIKLGLDQNLREEVRYQLRQSRHTSPLWNAKQFT 704
Query: 534 LGLESTYRNMWH 545
+ +E Y +W
Sbjct: 705 IDMEKAYEQIWQ 716
>gi|40063714|gb|AAR38495.1| TPR repeat protein [uncultured marine bacterium 583]
Length = 697
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 164/570 (28%), Positives = 260/570 (45%), Gaps = 44/570 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLGV E+ + D A+ Y+ A P AEA NLG KD LD AV+ Y+ AL+I
Sbjct: 147 YNLGVTLQELGQLDAAVECYKKALAIKPDYAEAHYNLGNALKDLGQLDAAVKSYEQALAI 206
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI----S 117
KP ++ + N G V ++D A E AIA P LG L +
Sbjct: 207 KPEYANAYFNRGHVLKNLKRLDEALVSYESAIAIKPDIDFI---LGDLLHTKMHLCIWDD 263
Query: 118 LAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH-DDKLFEAHRDWGKRFMRLYSQYTSW 176
LA +E KI+ + LLA+ I++ K E + + + S+ +
Sbjct: 264 LAHRLHELTKKINNSEKVVIPFALLAL--IDDPEVQKKTAEIYANENYPQSHVLSKIGRY 321
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
K + IGY S D+ H+ + + HD ++++ +S K ++R+
Sbjct: 322 PKHK----KIRIGYFSRDFHNHATMHLMAELFECHDKDCFELIAFSF---GPDKQDQWRK 374
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
+V + D+ +++V+ + R+ +IDI ++L G T + + A AP+QV+++G
Sbjct: 375 RVFLCFDQFVDVRLKSDREVSLLARKMEIDIAIDLKGFTRGCRPNIFAEGCAPIQVSYLG 434
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL--- 353
YP T +DY I D E + + E+++ +P Y + V T L
Sbjct: 435 YPGTMAANYMDYLIADHTLISEEKQHHYSEKIVYMPNS---YQVNVSKRSVSETSLLRYE 491
Query: 354 ----TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
GFI F FNN KITP W RIL AV +S L + F ++ +T
Sbjct: 492 LGLPNTGFI-FCCFNNNYKITPSTFTGWMRILKAVEDSVLWL----FENNN------NTA 540
Query: 410 EQLGLESLR--VDLLPLILLNH----DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC 463
+ L E+++ ++ L+ H DH+ D+ +DT PY TT ++L MG+P
Sbjct: 541 KNLKKEAIKFGINEDRLVFATHMPVEDHLNRIKQADLFIDTLPYNAHTTASDALRMGIPV 600
Query: 464 VTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSK 523
+T GS A V SLL V L LI +++Y A++LA+ L ++ L D +
Sbjct: 601 LTCIGSSFASRVAASLLNAVNLPELITTTQEQYESFAIELATKPEKLKIIKDKLVDNLPT 660
Query: 524 SPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+P+ D F LES Y M+ +Y +G P
Sbjct: 661 APLYDTLLFTRHLESAYLTMYEKYQQGLDP 690
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 9/150 (6%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+ ++ + D A+ YE A P A ACNNLGV ++ LD AV+ Y+ A++I
Sbjct: 79 YNLGLTLQDLGQLDAAVKSYEKAIAIKPDYANACNNLGVTLQELGQLDTAVKSYEQAIAI 138
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+F ++ NLGV G++DAA E +KA+A P YAEA+ NLG +D G + A+
Sbjct: 139 KPDFVEAYYNLGVTLQELGQLDAAVECYKKALAIKPDYAEAHYNLGNALKDLGQLDAAVK 198
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+YEQ L I P+ NA Y N GH
Sbjct: 199 SYEQALAIKPEYANA---------YFNRGH 219
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Query: 1 MYNL-GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL 59
+YNL G+ Y + + D A+ +E A P E NLG+ +D LD AV+ Y+ A+
Sbjct: 43 LYNLSGICYKTIGELDEAVKSFEKALAIKPDYTEVNYNLGLTLQDLGQLDAAVKSYEKAI 102
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
+IKP+++ + NNLGV G++D A + E+AIA P + EAY NLGV ++ G + A
Sbjct: 103 AIKPDYANACNNLGVTLQELGQLDTAVKSYEQAIAIKPDFVEAYYNLGVTLQELGQLDAA 162
Query: 120 IDAYEQCLKIDPDSRNAGQN 139
++ Y++ L I PD A N
Sbjct: 163 VECYKKALAIKPDYAEAHYN 182
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 76/130 (58%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLGV E+ + D A+ YE A P EA NLGV ++ LD AVECY+ AL+IK
Sbjct: 114 NLGVTLQELGQLDTAVKSYEQAIAIKPDFVEAYYNLGVTLQELGQLDAAVECYKKALAIK 173
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ NLG G++DAA + E+A+A P YA AY N G + ++ + A+ +
Sbjct: 174 PDYAEAHYNLGNALKDLGQLDAAVKSYEQALAIKPEYANAYFNRGHVLKNLKRLDEALVS 233
Query: 123 YEQCLKIDPD 132
YE + I PD
Sbjct: 234 YESAIAIKPD 243
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN N G+ Y G++D A + EKA+A P Y E NLG+ +D G + A+ +
Sbjct: 38 PNDPLLYNLSGICYKTIGELDEAVKSFEKALAIKPDYTEVNYNLGLTLQDLGQLDAAVKS 97
Query: 123 YEQCLKIDPDSRNAGQN 139
YE+ + I PD NA N
Sbjct: 98 YEKAIAIKPDYANACNN 114
>gi|99080945|ref|YP_613099.1| hypothetical protein TM1040_1104 [Ruegeria sp. TM1040]
gi|99037225|gb|ABF63837.1| TPR repeat [Ruegeria sp. TM1040]
Length = 616
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 227/512 (44%), Gaps = 55/512 (10%)
Query: 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR------- 134
MDA ++ +A+ PT Y +G L AID +E +K DP +
Sbjct: 112 MDALGSLM-RAVKLEPTNGSHYGMIGTLLMRLQKFEEAIDYFEIAVKFDPKNHIALSRMM 170
Query: 135 --NAGQNRLLAMN----YINEGH---------------DDKLFEAHRDWGKRFMRLYSQY 173
A + R N Y+ + DD F+ R + + S++
Sbjct: 171 HTKAHRARWDDFNKIPTYLKQFKNQNVLSDPFAFLSLCDDAAFQKQRSIAQ----INSKF 226
Query: 174 TS------WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA 227
+ + + + IGY S D++ H+ + + L HD +++ +Y K
Sbjct: 227 CNPVKAPIFKGERAAGEKIRIGYFSNDFYNHATMHLMGGLLENHDRSKFEIYIYDYGSKL 286
Query: 228 DAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQP 287
E+ + ++RDI ++ ++ + D +DI V+L G T N +L M +
Sbjct: 287 RDHE---HERARRSADVFRDIRTLNTAQIVDLAHGDALDIAVDLKGFTENGRLDMFNSRV 343
Query: 288 APVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPV 347
APVQV ++GYP TTGL ++DY + D + P ++ + E ++ +P C+ S V
Sbjct: 344 APVQVAYLGYPGTTGLKSMDYMVADKITIPSHLRKHYTENILYMPNCYQPNDESRFIAEV 403
Query: 348 CPTPALTN----GFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVR 402
T A + GF+ F SFNN K+TP+ +W +L VP+S L K D +R
Sbjct: 404 ADTRASHDLPEEGFV-FSSFNNPYKVTPREFGIWMDLLKEVPDSVLWFYVSKAEIIDRLR 462
Query: 403 HRFLSTLEQLGLESLRVDLLPLILLNHD-HMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
E G++ R+ +P + + H+ D+ LDTF TT ++L+ G+
Sbjct: 463 ----KEAESRGVDGARI--IPTGRMQPEYHLARLKHADLFLDTFNVNAHTTASDALWAGL 516
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P VT G A V S+L+ GL+ L+ +E +Y ++AL++A D LA++R L
Sbjct: 517 PVVTKTGEQFAARVAGSILSAAGLEDLVTHSEKKYYEVALRIAQDPDYLADIRKRLAASH 576
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
SP+ D +++ E + Y G+ P
Sbjct: 577 ENSPLFDTKSYTRDFERLMERAFQNYIDGNAP 608
>gi|402771865|ref|YP_006591402.1| hypothetical protein BN69_1300 [Methylocystis sp. SC2]
gi|401773885|emb|CCJ06751.1| TPR repeat protein [Methylocystis sp. SC2]
Length = 451
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 179/372 (48%), Gaps = 19/372 (5%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
+GY+S D+ H+ ++ + L HD +++ YS A R R + D
Sbjct: 87 VGYLSNDFHEHATAHLLVETLEAHDRARFEIRAYSYCGVEGAMRTRLRAAF----DAFAD 142
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
I + + + A ++ D +DILV+L G T + +M +PAPVQV ++GYP T G D
Sbjct: 143 ISQLTDAEAARLINADGVDILVDLKGFTHGARTSVMMLRPAPVQVNYLGYPGTLGTGVCD 202
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT------NGFITFG 361
Y +TD PP + + E LP Y P P+ P+ GF+ +
Sbjct: 203 YIVTDRYVTPPSSASAYSEAFAYLPHA---YQPHGRGTPLRAPPSRAAAGLPAEGFV-YC 258
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
FN K+TP + +WAR+L A P + L + ++R+ + + G+++ R+
Sbjct: 259 CFNQAYKLTPFIFDLWARLLEATPGAVLWLSAAMLAEGNLRNE----MRRRGIDAARMIF 314
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
P L +H+ L D++LDT P+ TT ++L+ GVP VT AG V SLL
Sbjct: 315 APH-LPQAEHLARLQLADLALDTAPFGSHTTASDALWAGVPIVTCAGDTFPSRVAGSLLH 373
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+G+ LIA + DEY+++AL LA D A LR L + + D +++ LES +
Sbjct: 374 AIGMPELIAADFDEYLEIALVLAGDPVRYAELRGKLAANRLTTALFDVRSYTRALESLFE 433
Query: 542 NMWHRYCKGDVP 553
MW R G P
Sbjct: 434 AMWRRRLAGAPP 445
>gi|425445188|ref|ZP_18825224.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9443]
gi|389734922|emb|CCI01529.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9443]
Length = 717
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 186/372 (50%), Gaps = 16/372 (4%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
K P R + IGY++ HSV + YH+ +++ Y AD T EK
Sbjct: 355 KSPARKIKIGYIAHTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEIT----EKWF 410
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ +++ A +R+D +DILV++ T N +MA +PAP+QVTW+G +
Sbjct: 411 INNSDYSYNLPAKIEQITAQIRQDNLDILVDIDSLTNNTTYLVMALKPAPIQVTWLGL-D 469
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN---- 355
+G+P IDY I D+ P ++ + E++IRLP +L E G PT T+
Sbjct: 470 ASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLS-VDGFEVG--VPTRRRTDLNIP 526
Query: 356 -GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQLG 413
I + + + K T ++ + +IL VPNS L++K F +++R FL + ++LG
Sbjct: 527 DDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKG--FADKETIRELFLKSADELG 584
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ R+ LP H + DI LDT+PY+G TTT E+L+MG+P VT G A
Sbjct: 585 ISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAA 644
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ + G+ IA +++EYVQ ++L D +R LR SP+ + + F
Sbjct: 645 RNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDKNLREEVRYQLRQSRHTSPLWNAKQFT 704
Query: 534 LGLESTYRNMWH 545
LE+ Y+ MW+
Sbjct: 705 RDLETAYQQMWN 716
>gi|425445186|ref|ZP_18825222.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9443]
gi|389734920|emb|CCI01527.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9443]
Length = 717
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 188/379 (49%), Gaps = 20/379 (5%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA-VVKADAKTIRFREKV 238
KD + L IGY++ HSV + + YH N+ + +Y V+ D F+ KV
Sbjct: 351 KDVNKKLNIGYIAHTLRRHSVGFLSRWLIHYHQRDNFNIHLYLVNQVEDDITEQWFKNKV 410
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ + + + +A + +D IDILV+L T + +MA +PAP+Q+TW+G
Sbjct: 411 DRYDNL-----PANHQIIAEKINQDNIDILVDLDSITNDATCRVMALKPAPIQITWLGL- 464
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN--- 355
+ TG+P IDY + D+L ++ + E+L LP C+L G TP LT
Sbjct: 465 DATGIPAIDYFLVDNLVLEKNAQEFYQEKLWHLPNCYLAVD-----GFEIGTPTLTRQNL 519
Query: 356 ----GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
IT+ + K P +++ I+ AVPNS L++K ++ F+S ++
Sbjct: 520 NIPADAITYLTLQVGLKRNPATIRLQMHIIKAVPNSYLLIKGAG-SEKLIKDLFISIAKE 578
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
G++ R+ L + H + D+ LDT+PY+G TTT E+L+MG+P VT G
Sbjct: 579 EGIDENRLRFLSGVATEEIHRANLQIADVVLDTYPYSGATTTLEALWMGIPVVTKVGQQW 638
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A + +T G+ IA +++EY+Q ++L D + M L+ +P+ + +
Sbjct: 639 ASRNSYTFITYAGISEGIAWSDEEYIQWGIKLGMDEELRKKIAMQLQASRQTAPLWNARQ 698
Query: 532 FALGLESTYRNMWHRYCKG 550
F +ESTYR MW YC+
Sbjct: 699 FTKDVESTYRQMWQIYCES 717
>gi|429099661|ref|ZP_19161767.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter dublinensis 582]
gi|426286001|emb|CCJ87880.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter dublinensis 582]
Length = 292
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 164/300 (54%), Gaps = 26/300 (8%)
Query: 265 IDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR-ITDSLADPPETKQK 323
+DIL++L+GHT +L M A +PAP+Q+TWIGYP TTG+P +DYR ++ +LA PP ++
Sbjct: 1 MDILIDLSGHTTWTRLPMFALRPAPLQMTWIGYPGTTGVPAMDYRLLSSTLASPPGLAEQ 60
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCA 383
E+++ +P + P P++ V PAL NG +TF SFN K+ +VL++WA+IL
Sbjct: 61 FTEQILWVP-MRKIFEPHPQSPDVNTLPALRNGHLTFASFNRPKKVNDEVLELWAQILVR 119
Query: 384 VPNSRLVVKCKPFCCDS------VRH--RFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
P+++L++ F D R RF + EQL ++ R L+ + +H
Sbjct: 120 EPSAKLLMG---FMADDEMIAMMTRQLTRFGARPEQLIFKT-RTGLIGYLEYHHH----- 170
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+DI LD FPY G TTT +MGVP +T+ G A GV ++ GL +A ++ +
Sbjct: 171 --IDILLDAFPYTGGTTTNHGAWMGVPTLTLCGETMAGRQGVDIMNGYGLAEFVANDKAD 228
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPV--CDGQNFALGLESTYRNMWHRYCKGDVP 553
YV AL L +R+S+R S+ P DG A E R+ W YC G+ P
Sbjct: 229 YVNKALSWQGRFEELNAIRLSMR---SRIPTDNADGFRVADTFEKGLRDAWKIYCTGEAP 285
>gi|298710892|emb|CBJ26401.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
family GT41 [Ectocarpus siliculosus]
Length = 1080
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/568 (26%), Positives = 253/568 (44%), Gaps = 25/568 (4%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E K A+ Y A +P A+A +N+G YKD L +A++CY A++IK
Sbjct: 383 NLGSVLKEQGKLAHALAHYHEAIAIDPGFADAYSNMGNAYKDMGRLPEAIKCYSAAINIK 442
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG---VLYRDAGSISLA 119
P F+ + +NL Y + A KA++ P + +A+ NL V D +
Sbjct: 443 PTFADAFSNLASAYKEGNDVLQAIACYRKALSLRPDFPDAFANLVHSLVFVCDWSNRDDD 502
Query: 120 IDAYEQCLKIDPDSRNA--GQNRLLAMNY-INEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
A ++ L + N AM Y ++ ++ + + K + L
Sbjct: 503 FAALKKMLATQMATENMLPSVQPFHAMAYPLSLAEMQQISCKYAERVKMNVALLEMPAFR 562
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
+ K E + +GYVS D H +S+ +++ HD ++V Y+ D+ +R
Sbjct: 563 FHRKAKEARIRVGYVSSDLGNHPLSHLMQSVFGMHDRTRFEVKCYALSANDDSV---WRR 619
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
K+ + + D+ G+ VA ++ D IDIL+ L G+T + + A QPAPVQV+++G
Sbjct: 620 KIEGESEHFCDVSGLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQVSYLG 679
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG--------PVC 348
+ T G + Y I D P E+++ + E ++ +P + A P
Sbjct: 680 FCGTLGADYMQYMIADETIVPRESRRFYTENILYMPHSYFVNDHKQSARYVLDRTLLPTR 739
Query: 349 PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLS 407
T + +FN L K+ P + W +L VPN+ L +++ P ++R
Sbjct: 740 ATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVPNAVLWLLRFPPAGEANIRME--- 796
Query: 408 TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
+ G+ ++ + +H++ L D+ LDT TT C+ L+ G P +TMA
Sbjct: 797 -ARKRGVREEQLHFTD-VATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTMA 854
Query: 468 GSVHAHNVGVSLLTKVGLK--HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
GS A V SLL G + LI ++ +EY + A+ LA+D L +R L + P
Sbjct: 855 GSKMATRVAPSLLKAAGAEGTGLIVESLEEYEERAVSLATDPEKLFEIRSRLEESRHSCP 914
Query: 526 VCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ D Q + +E+ R+ G P
Sbjct: 915 LFDTQRWVRNMEAGLAMAHERFQAGLDP 942
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + + AI Y P A NNLG KD+ + +A+ CY A+ +
Sbjct: 315 NLGNALRESGQLEEAINCYRTTLRLKPDHPHAYNNLGNAMKDKGLIKEAIHCYVTAVQLM 374
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ +NLG V QGK+ A +AIA +P +A+AY+N+G Y+D G + AI
Sbjct: 375 PKFAAVHSNLGSVLKEQGKLAHALAHYHEAIAIDPGFADAYSNMGNAYKDMGRLPEAIKC 434
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
Y + I P +A N LA Y EG+D
Sbjct: 435 YSAAINIKPTFADAFSN--LASAY-KEGND 461
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E A+ +Y A P A+A +NLG + K+R + A++CYQ A+ ++
Sbjct: 213 NLAGIFKEEGNLTTAVAYYREAIRLCPEFADAHSNLGNVLKERGLVHDAMQCYQTAIKLR 272
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + NL Y G D A + AI P + +AYNNLG R++G + AI+
Sbjct: 273 PDFAIAYGNLASCYYDCGCQDLAIKTFRYAIQLEPNFPDAYNNLGNALRESGQLEEAINC 332
Query: 123 YEQCLKIDPDSRNAGQNRLLAM 144
Y L++ PD +A N AM
Sbjct: 333 YRTTLRLKPDHPHAYNNLGNAM 354
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 73/130 (56%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY ++ AI Y++A N +A +NLG +YK + L +A CY A+ I+
Sbjct: 145 NLASAYMQLGHTKEAIETYQMALVLNRGLVDAHSNLGNLYKAQGMLAEAKRCYLEAIRIQ 204
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NL ++ +G + A +AI P +A+A++NLG + ++ G + A+
Sbjct: 205 PSFAIAWSNLAGIFKEEGNLTTAVAYYREAIRLCPEFADAHSNLGNVLKERGLVHDAMQC 264
Query: 123 YEQCLKIDPD 132
Y+ +K+ PD
Sbjct: 265 YQTAIKLRPD 274
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E+ AI FY A P +A NNL Y + +A+E YQMAL +
Sbjct: 111 NLGNALKELGDVGGAIQFYLKAVKLKPRFCDAYNNLASAYMQLGHTKEAIETYQMALVLN 170
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ +NLG +Y QG + A +AI P++A A++NL ++++ G+++ A+
Sbjct: 171 RGLVDAHSNLGNLYKAQGMLAEAKRCYLEAIRIQPSFAIAWSNLAGIFKEEGNLTTAVAY 230
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + +++ P+ +A N
Sbjct: 231 YREAIRLCPEFADAHSN 247
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + AI Y A P A +NLG + K++ L A+ Y A++I
Sbjct: 349 NLGNAMKDKGLIKEAIHCYVTAVQLMPKFAAVHSNLGSVLKEQGKLAHALAHYHEAIAID 408
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G Y G++ A + AI PT+A+A++NL Y++ + AI
Sbjct: 409 PGFADAYSNMGNAYKDMGRLPEAIKCYSAAINIKPTFADAFSNLASAYKEGNDVLQAIAC 468
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYI 147
Y + L + PD +A N + ++ ++
Sbjct: 469 YRKALSLRPDFPDAFANLVHSLVFV 493
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + ++ F +++ + +P+ AEA +NLG K+ ++ A++ Y A+ +KP
Sbjct: 78 LGAVHFQLRNFSECVLYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKAVKLKP 137
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
F + NNL Y G A E + A+ N +A++NLG LY+ G ++ A Y
Sbjct: 138 RFCDAYNNLASAYMQLGHTKEAIETYQMALVLNRGLVDAHSNLGNLYKAQGMLAEAKRCY 197
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+ ++I P A N LA + EG+
Sbjct: 198 LEAIRIQPSFAIAWSN--LAGIFKEEGN 223
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y A Y A P A A +NL I+K+ NL AV Y+ A+ +
Sbjct: 179 NLGNLYKAQGMLAEAKRCYLEAIRIQPSFAIAWSNLAGIFKEEGNLTTAVAYYREAIRLC 238
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NLG V +G + A + + AI P +A AY NL Y D G LAI
Sbjct: 239 PEFADAHSNLGNVLKERGLVHDAMQCYQTAIKLRPDFAIAYGNLASCYYDCGCQDLAIKT 298
Query: 123 YEQCLKIDPDSRNAGQN 139
+ ++++P+ +A N
Sbjct: 299 FRYAIQLEPNFPDAYNN 315
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E A+ Y+ A P A A NL Y D D A++ ++ A+ ++
Sbjct: 247 NLGNVLKERGLVHDAMQCYQTAIKLRPDFAIAYGNLASCYYDCGCQDLAIKTFRYAIQLE 306
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NNLG G+++ A + P + AYNNLG +D G I AI
Sbjct: 307 PNFPDAYNNLGNALRESGQLEEAINCYRTTLRLKPDHPHAYNNLGNAMKDKGLIKEAIHC 366
Query: 123 YEQCLKIDP 131
Y +++ P
Sbjct: 367 YVTAVQLMP 375
>gi|148238461|ref|YP_001223848.1| glycosyl transferase family protein [Synechococcus sp. WH 7803]
gi|147847000|emb|CAK22551.1| Glycosyltransferase of family GT41 [Synechococcus sp. WH 7803]
Length = 721
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 228/486 (46%), Gaps = 18/486 (3%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN NL ++AA ++++ + P ++ LG + G LA+
Sbjct: 236 PNNGSHWLNLAASLRSSKHINAALTVVKRGLCRAPEVSKLQQALGQCLAELGKPELALPV 295
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD----DKLFEAHRDWGKRFMRLYSQYTSW-D 177
Q P + G L + + + ++L R W +R + + W D
Sbjct: 296 LRQ--SAGPMDK-IGDEHLFNIQFNGAAYHLIPAEELQRWARSWEQRVLNDKGLHNLWAD 352
Query: 178 NTKDP--ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR 235
+ P +R L IGY+S D+ H V F+ L HD +V S D T
Sbjct: 353 TIRQPPQQRRLRIGYLSADWCNHPVCRFMLPVLENHDRTAVEVWGLSNSPHHDLGT---- 408
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
+ W D+ + + ++A M+ + ++D+LVEL G+T ++++ + +PAPVQ++++
Sbjct: 409 SMAQARCDHWLDLEHVGDLEMARMIADLQLDVLVELGGYTGHSRITALLHRPAPVQLSYL 468
Query: 296 GYPNTTGLPTIDYRITDS-LADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT 354
GY T L ID I D L E + L + ++ Y S + P C A
Sbjct: 469 GYFAPTYLNAIDGWIGDQELFGGLEPTDAQSQTLWMVKGGYMVYK-SFDPLPDCERSA-- 525
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
FGSFN+ K+ P ++++A +L VPNS LV+K F + + R + L G+
Sbjct: 526 GKRFRFGSFNHSRKLNPGTIRLYAGVLRDVPNSTLVLKSVSFVEQAEKTRVMQALTAAGI 585
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
R+ LLP + +H+ Y +D+ LD FPY G T+TC++L MGVP V++A +
Sbjct: 586 GEDRILLLPSTANHKEHLALYREVDVVLDPFPYGGATSTCDALMMGVPVVSLASAGMVGR 645
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
+ S+L GL+ IA+++ +Y ++A +LA++ R+ LR+ + SP+C+
Sbjct: 646 LSSSILASAGLEKWIARSQTDYRRIARELAAEGPVEPTARLKLREQVQNSPLCEATRLCR 705
Query: 535 GLESTY 540
LE Y
Sbjct: 706 ELERIY 711
>gi|429110820|ref|ZP_19172590.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter malonaticus 507]
gi|426311977|emb|CCJ98703.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter malonaticus 507]
Length = 307
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 165/305 (54%), Gaps = 9/305 (2%)
Query: 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRL 141
M A + +A P +GV+ D + A E+ L++ P+ + + L
Sbjct: 1 MTLAEKCAREAFRFQPRNPRYLAMMGVVLSDNQKLDEARYFLEKSLELSPEDFDCFTSLL 60
Query: 142 LAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT---SWDNTKDPERPLVIGYVSPDYFTH 198
+ + N +L HRD+G+R + +N KDP R L +G+VS D TH
Sbjct: 61 FVLTHDNRVSAQELLAKHRDYGERVTSYAERLALNLPLNNVKDPHRKLRVGFVSGDLRTH 120
Query: 199 SVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
VS F+ D +++V Y+A D T R + +WRD+Y + ++++A
Sbjct: 121 PVSNFLLPFWESFDRTQFELVGYNAAPMHDEVTDHLRAGAV----LWRDVYQLSDRELAR 176
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR-ITDSLADP 317
+V +D +DIL++L+GHT +L M A +PAP+Q+TWIGYP TTG+P +DYR ++ +LA P
Sbjct: 177 LVNDDGVDILIDLSGHTTWTRLPMFALRPAPLQMTWIGYPGTTGVPAMDYRLLSSTLASP 236
Query: 318 PETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
P ++ E+++ +P + P P++ V P PAL NG +TF SFN KI +VL++W
Sbjct: 237 PGLAEQFTEQILWVP-MRKIFEPHPQSPDVNPLPALRNGHLTFASFNRPKKINDEVLELW 295
Query: 378 ARILC 382
A+IL
Sbjct: 296 AQILV 300
>gi|425436658|ref|ZP_18817092.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9432]
gi|389678581|emb|CCH92566.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9432]
Length = 721
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 185/372 (49%), Gaps = 16/372 (4%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
K P R + IGY++ HSV + YH+ +++ Y +D T EK
Sbjct: 355 KSPARKIKIGYIAHTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQASDEIT----EKWF 410
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ +++ A +R+D +DILV++ T N +MA +PAP+QVTW+G +
Sbjct: 411 INNSDYSYNLPAKIEQITAQIRQDNLDILVDIDSLTNNTTYLVMALKPAPIQVTWLGL-D 469
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN---- 355
+G+P IDY I D+ P ++ + E++IRLP +L E G PT T+
Sbjct: 470 ASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLS-VDGFEVG--VPTRRRTDLNIP 526
Query: 356 -GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQLG 413
I + + + K T ++ + +IL VPNS L++K F +++R FL + ++LG
Sbjct: 527 DDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKG--FADKETIRELFLKSADELG 584
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ R+ LP L H + DI LDT+PY+G TTT E+L+MG+P VT G A
Sbjct: 585 ISQDRLRFLPNDLHEETHRANLGIADIILDTYPYSGATTTLETLWMGIPLVTRVGEQFAA 644
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ + G+ IA +E+EYVQ ++L D +R LR SP+ + + F
Sbjct: 645 RNSYTFMKNAGISQGIAWSEEEYVQWGIKLGLDQNLREEIRYQLRQSRHTSPLWNAKQFT 704
Query: 534 LGLESTYRNMWH 545
+ +E Y +W
Sbjct: 705 IDMEKAYEQIWQ 716
>gi|425468292|ref|ZP_18847322.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9701]
gi|389885052|emb|CCI34703.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9701]
Length = 721
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 186/374 (49%), Gaps = 16/374 (4%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
K P R + IGY++ HSV + YH+ +++ Y AD T EK
Sbjct: 355 KSPARKIKIGYIAHTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEIT----EKWF 410
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ +++ A +R+D +DILV++ T N +MA +PAP+QVTW+G +
Sbjct: 411 INNSDYSYNLPAKIEQITAQIRQDNLDILVDIDSLTNNTTYLVMALKPAPIQVTWLGL-D 469
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN---- 355
+G+P IDY I D+ P ++ + E++IRLP +L E G PT T+
Sbjct: 470 ASGIPAIDYFIADNYVLPENAQEIYSEKIIRLPNSYLS-VDGFEVG--VPTRRRTDLNIP 526
Query: 356 -GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQLG 413
I + + + K T ++ + +IL VPNS L++K F +++R FL + ++LG
Sbjct: 527 DDAIIYLTVQSGLKRTLNMICLQLQILQQVPNSYLLIKG--FADKETIRELFLKSADELG 584
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ R+ LP H + DI LDT+PY+G TTT E+L+MG+P VT G A
Sbjct: 585 ISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAA 644
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ + G+ IA +++EYVQ ++L D +R L +SP+ +G+ F
Sbjct: 645 RNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDQNLREEIRYQLHQSRHRSPLWNGKKFT 704
Query: 534 LGLESTYRNMWHRY 547
L +E Y +W +
Sbjct: 705 LDMEKAYEQIWQNH 718
>gi|256829653|ref|YP_003158381.1| hypothetical protein Dbac_1874 [Desulfomicrobium baculatum DSM
4028]
gi|256578829|gb|ACU89965.1| Tetratricopeptide TPR_2 repeat protein [Desulfomicrobium baculatum
DSM 4028]
Length = 793
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 189/384 (49%), Gaps = 16/384 (4%)
Query: 155 LFEAHRDWGKRFMRLYSQYT-SWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
L E HR WG+ + + T + T +R L +G++S D H V YF L +D
Sbjct: 406 LVEWHRQWGRGVIGGVTPVTPAAMPTMASKRKLRVGFMSSDLRNHPVGYFAYPLLSRYDR 465
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
++V YS + + + ++ K +R G ++VA + D +DIL EL G
Sbjct: 466 DRFEVYCYSFYEGSPSPA---QAQIESKVAAYRWWPGRTSEQVAEGIAVDGLDILFELGG 522
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
TA NKL +MA +PA + +W+GYP++ GL TIDY + D P + + +E L E
Sbjct: 523 STAMNKLDVMAYRPARIGASWLGYPHSAGLETIDYIVVDPYILPSDPRLL-IERPFELSE 581
Query: 334 CFLC-----YTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
++ + P AG + P G +TFG+ NN KIT L WA +L VP S
Sbjct: 582 TWVVVGRNNFADVPIAGGL---PEDRRGRLTFGTANNPYKITEACLDCWAAVLRRVPGSH 638
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
+ S + + ++ R+D I + H+Q Y+ +DI+LDT P+
Sbjct: 639 FLFLRPEAATPSFKANARAAFAARNVDPGRLDF---IGVRGTHLQHYNEIDIALDTLPHV 695
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
G TTTCE+L+MGVP +++ G A + S L+ GL L + D YV+ A LA D T
Sbjct: 696 GGTTTCEALWMGVPTISLVGPGFAERLSYSNLSNAGLGDLAVFSTDNYVEQAAMLAEDRT 755
Query: 509 ALANLRMSLRDLMSKSPVCDGQNF 532
LR LRD+++ +P+ F
Sbjct: 756 RRLALRHGLRDMIATNPLGQADRF 779
>gi|78188708|ref|YP_379046.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78170907|gb|ABB28003.1| TPR repeat [Chlorobium chlorochromatii CaD3]
Length = 706
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 156/590 (26%), Positives = 260/590 (44%), Gaps = 55/590 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY F A+ Y+ A P AE + G +Y+ + +AV+ Y+ +L +
Sbjct: 122 NLAKAYSVRGNFFAALQTYKAALRLKPQDAELYLDCGQLYQQYGFIPQAVKYYRRSLQLA 181
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ ++ N LG G + A +A+ P + NL LY + G + A
Sbjct: 182 AS-ARGYNALGAALQDWGNLKLARASYHRALKLQPDFDLPQYNLAQLYENLGELETARRY 240
Query: 123 YEQCLKIDPDS------------RNAGQN----RLLAMNYINEGH--DDK---------- 154
YEQ L +D ++ R A + R+ + + E H +DK
Sbjct: 241 YEQTLTVDAENAKLLLHLEMIKRRQADWSNYTERVEQLRHALERHVENDKGEAVPMLSVL 300
Query: 155 -------LFEAHRDWGKRFMRLYSQYT----SWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
L+ A + R + +Q ++ N PER L IGY+SPD+ H+V
Sbjct: 301 SSSLSPALYRALAEQMARQLTRNAQALNATFTFPNNVAPER-LKIGYLSPDFRGHAVGTL 359
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
I YH+ +++V YS + D T E+V + D+ +A + D
Sbjct: 360 IADLFQYHERPDFEVFAYSLLPHHDEWT----ERVKAGCDHFIDVSHKSPLAIAQQIHAD 415
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
I ILV+L G+T+ + ++A +PAP+Q+ ++GYP T G + I D P +
Sbjct: 416 GIHILVDLAGYTSYARPLVLALKPAPIQLQYLGYPGTLGAEYVPTIIADKHLIPENHQSY 475
Query: 324 HVEELIRLPECFLCYTPSP-EAGPVCPTPA---LTNGFITFGSFNNLAKITPKVLQVWAR 379
+ E+L LP ++ +P + + T A L + + FN + K+ P V +W
Sbjct: 476 YTEQLCLLPHAWVA---APMQIASLSLTRAEFGLPEKGMVYCCFNGVYKLEPHVFSLWME 532
Query: 380 ILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMD 439
IL VPNS L + + R R + ++ G+ R+ + + +++ Y L D
Sbjct: 533 ILSKVPNSVLWLIDGEESGSNERLR--AVAQEAGIAPERL-VFAKKRSHEEYLALYRLAD 589
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
+ LDT Y T + G+P +T G +A +G +L VGL L+A +YV+
Sbjct: 590 LFLDTLSYNAGATAVGAFSAGLPLLTCQGEHYATRMGSALCYAVGLPELVAPTPADYVEF 649
Query: 500 ALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
A+QL S A L+ L + +P+ Q F + LE YR++W+ YC+
Sbjct: 650 AVQLGSSPKKRAALKRKLAKKLPTAPLFQPQQFVVALEQQYRSLWNNYCE 699
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
D A Y+ A H+ P N G + R D A++ YQ AL+++ +F + NL
Sbjct: 66 DGAEAVYQQALHYAPMLPVLHCNYGSLLLARQEYDAAIKSYQKALTLQADFFLAYTNLAK 125
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
Y+V+G AA + + A+ P AE Y + G LY+ G I A+ Y + L++ +R
Sbjct: 126 AYSVRGNFFAALQTYKAALRLKPQDAELYLDCGQLYQQYGFIPQAVKYYRRSLQLAASAR 185
Query: 135 NAGQNRLLAMNYINEGHDDKLFEAHRDWG 163
G N L A A +DWG
Sbjct: 186 --GYNALGA--------------ALQDWG 198
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
AI + P A NNL + + + D A YQ AL P N G +
Sbjct: 34 AIEAFREVIELQPDYVAAYNNLANALQAQGDSDGAEAVYQQALHYAPMLPVLHCNYGSLL 93
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+ + DAA + +KA+ + AY NL Y G+ A+ Y+ L++ P
Sbjct: 94 LARQEYDAAIKSYQKALTLQADFFLAYTNLAKAYSVRGNFFAALQTYKAALRLKPQ 149
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 43 KDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA 102
+ + L++A+E ++ + ++P++ + NNL QG D A + ++A+ P
Sbjct: 26 RKQGMLNEAIEAFREVIELQPDYVAAYNNLANALQAQGDSDGAEAVYQQALHYAPMLPVL 85
Query: 103 YNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+ N G L AI +Y++ L + D
Sbjct: 86 HCNYGSLLLARQEYDAAIKSYQKALTLQAD 115
>gi|145588309|ref|YP_001154906.1| hypothetical protein Pnuc_0121 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046715|gb|ABP33342.1| TPR repeat-containing protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 732
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 142/579 (24%), Positives = 259/579 (44%), Gaps = 43/579 (7%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G A+ + ++ A+ YE + + A+A +I+ + D ++ C AL I+
Sbjct: 147 NQGNAFLALSRYQAALACYEKTVLLDANNAKAFYGAAIIFDLQKKYDYSLGCCNQALKIQ 206
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ ++L G +Y + A ++ + +P +A+ + G +Y + A +A
Sbjct: 207 PHYLEALALRGTIYFRAKDYEQALTNFDEILLIHPQSIQAWLSKGDIYAETKQFEKADEA 266
Query: 123 YEQCLKIDP--------------------DSRNA----------GQNRLLAMNYINEGHD 152
+++ L IDP D N G+ + N I+ D
Sbjct: 267 FKKALVIDPTKDFLFGLSIQNQIQMCQWTDLTNQVKDLVHRVRDGEKVAIPYNLISLVDD 326
Query: 153 DKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
L + + MR + + P++ + +GY S D+ H +Y + HD
Sbjct: 327 KSLIRCSIEIYAQAMRGNIERVKQEKIS-PKKKIRLGYFSADFHNHPTAYLVAELFECHD 385
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+ +++ + V +A R ++ K + D+ ++++A + RE IDI ++L
Sbjct: 386 KEKFEL--FGFVFGRNAPD-EMRNRLEKSFDQFLDVEDRSDEEIAQLAREMHIDIAIDLK 442
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G T + + AP+Q++++ +P T GLP DY I D + P + + VE++I +P
Sbjct: 443 GFTKEARPKIFMYGAAPIQISYLAFPGTMGLPCFDYVIADPILIPEKHQDGMVEKIIYMP 502
Query: 333 ECFLCYTPSPEAGPVCPTP---ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL 389
+ + S + P+ + L F FNN KITP VL W +IL AV S L
Sbjct: 503 DSYQVNDRSRKISPLIKSRKELGLPESGFVFCCFNNNYKITPAVLDGWVKILLAVEGSVL 562
Query: 390 -VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
+ + P +++ L+ GL++ R + + + DH+ Y ++ LDT P
Sbjct: 563 WLYEDNPIAVANLKQEALTR----GLDAGRF-IFAGRMDSADHLARYKNANLFLDTTPCN 617
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
TT ++L+ G+P +T+AG V SL VGL L + ++EY LA+QLA+ +
Sbjct: 618 AHTTASDALWAGLPVLTLAGESFGARVAASLNNAVGLSGLTVETQEEYEALAIQLATSPS 677
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
L L+ L + +P+ D F LE+ Y + R+
Sbjct: 678 RLKELKDRLERNLLTAPLFDTPLFTKNLEAGYIEAYERH 716
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG+ G + A+ + A +P A +N G + + ++A+ CY+ A+S++P
Sbjct: 46 LGIIAGLQKDWTQALELIDQAIAVSPENGLAYSNRGNVLSELKRHEEALTCYEKAISLQP 105
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++++ +N G G+ + A EKAI+ P YAEAY+N G + A+ Y
Sbjct: 106 DYAEAYSNQGNALQALGRFEEALICYEKAISLQPDYAEAYSNQGNAFLALSRYQAALACY 165
Query: 124 EQCLKIDPDSRNA 136
E+ + +D ++ A
Sbjct: 166 EKTVLLDANNAKA 178
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E+ + + A+ YE A P AEA +N G + ++A+ CY+ A+S++
Sbjct: 79 NRGNVLSELKRHEEALTCYEKAISLQPDYAEAYSNQGNALQALGRFEEALICYEKAISLQ 138
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++++ +N G + + AA EK + + A+A+ +++ ++
Sbjct: 139 PDYAEAYSNQGNAFLALSRYQAALACYEKTVLLDANNAKAFYGAAIIFDLQKKYDYSLGC 198
Query: 123 YEQCLKIDP 131
Q LKI P
Sbjct: 199 CNQALKIQP 207
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G A + +F+ A++ YE A P AEA +N G + A+ CY+ + +
Sbjct: 113 NQGNALQALGRFEEALICYEKAISLQPDYAEAYSNQGNAFLALSRYQAALACYEKTVLLD 172
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N +++ +++ +Q K D + +A+ P Y EA G +Y A A+
Sbjct: 173 ANNAKAFYGAAIIFDLQKKYDYSLGCCNQALKIQPHYLEALALRGTIYFRAKDYEQALTN 232
Query: 123 YEQCLKIDPDSRNA 136
+++ L I P S A
Sbjct: 233 FDEILLIHPQSIQA 246
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%)
Query: 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA 92
+A LG+I + + +A+E A+++ P + +N G V + + + A EKA
Sbjct: 41 DALRFLGIIAGLQKDWTQALELIDQAIAVSPENGLAYSNRGNVLSELKRHEEALTCYEKA 100
Query: 93 IAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
I+ P YAEAY+N G + G A+ YE+ + + PD A N+
Sbjct: 101 ISLQPDYAEAYSNQGNALQALGRFEEALICYEKAISLQPDYAEAYSNQ 148
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
+ L+ A + LS + + +L LG++ +Q A E+I++AIA +P AY+N
Sbjct: 20 NELESAKLHLKAVLSKERSQPDALRFLGIIAGLQKDWTQALELIDQAIAVSPENGLAYSN 79
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
G + + A+ YE+ + + PD A N+
Sbjct: 80 RGNVLSELKRHEEALTCYEKAISLQPDYAEAYSNQ 114
>gi|254476420|ref|ZP_05089806.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110kDa subunit, putative [Ruegeria sp. R11]
gi|214030663|gb|EEB71498.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110kDa subunit, putative [Ruegeria sp. R11]
Length = 547
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 237/509 (46%), Gaps = 37/509 (7%)
Query: 40 VIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY 99
++ D + +A+ Q ALS+ P+ S + LG G A E++E A+ +
Sbjct: 53 IVASDPARIREAIGWQQKALSLAPHNSVFIAALGSRLRDGGLEKEALEVLEYALEVDENN 112
Query: 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH 159
A A L ++ R DA ++ + + + Q++ + + D +L A+
Sbjct: 113 AIA---LPLILRLRRQFLAWTDAEQETATLQ--RQLSHQHKFAPLTLLTLIDDPELQLAN 167
Query: 160 RDWGKRFMRLYSQYTSWDNTKD--PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYK 217
RL + + + + P + +GY S D + H + E L HD ++
Sbjct: 168 -------ARLAAPVSRQIDLRPHPPSDRIRVGYFSADIYDHPTMHLFEGALRAHDRDRFE 220
Query: 218 VVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTAN 277
VY + +++ V + +RDI I ++A + R D+IDI V+L G T
Sbjct: 221 FFVYDLAPREGG----YQQLVQEIADTYRDISAISAGQIAEVARRDQIDIAVDLKGDTFQ 276
Query: 278 NKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC 337
++ + A + APVQV+++G+P T+G+ +D+ + D + PPE + + E ++R+P+C+
Sbjct: 277 SRPEIFAHRAAPVQVSFLGFPGTSGMADMDFMVADPITIPPEAEHCYSERILRMPQCY-- 334
Query: 338 YTPSPEAGPVCPTPALTNGFITFG---------SFNNLAKITPKVLQVWARILCAVPNSR 388
P P +PA TN FG +FNN+ KI P+ W IL A PNS
Sbjct: 335 ---QPNTNPRY-SPADTNMRDRFGIPQDRFVFATFNNIYKIGPREFATWMEILKAAPNSV 390
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L+ ++ R ++ ++ G++ RV +L L DH+ S +D+ LD F Y
Sbjct: 391 LLFYLSNL---DLKDRLIAKVKAAGVDPDRV-ILTGPLPQKDHLDRISQVDLCLDCFSYN 446
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
TT ++++ GVP +T+ G A V S+L L L + EYVQLA LA D
Sbjct: 447 AHTTASDAIWCGVPILTLCGEQFAARVATSILHAANLAELSVTSVAEYVQLAAALAKDPE 506
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLE 537
L+ ++ L++ + P+ D Q + E
Sbjct: 507 RLSRIKRQLKEERDQLPLFDTQTWTRDFE 535
>gi|148238460|ref|YP_001223847.1| glycosyl transferase family protein [Synechococcus sp. WH 7803]
gi|147846999|emb|CAK22550.1| Glycosyltransferase of family GT41 [Synechococcus sp. WH 7803]
Length = 696
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 185/365 (50%), Gaps = 12/365 (3%)
Query: 185 PLVIGYVSPDYFTHSVSYFIEA--PLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
PL I ++S D H V+ FI H +Q+ +V + ++ RFR +
Sbjct: 327 PLRIAWISGDLCHHPVARFIMGFFEASAHRFQHQHCLVNLRDHQGESYIDRFRRYPQLQH 386
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
D D ++ ++R+ + D+ ++L+G T + + + AP+Q+ ++GY +TG
Sbjct: 387 ---LDATVEDPREKVRVIRDGQFDVAIDLSGWTGGHFMRGFLARLAPLQLNYLGYFASTG 443
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG----PVCPTPALTNGFI 358
LPT+D I D P ++ H E + RLP CF+ + PS + PV P +G I
Sbjct: 444 LPTMDGWIGDDGLFPTPMQEWHTETIQRLPRCFIAWQPSQQLDEAHEPVTSAP---SGGI 500
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
FG FN+ K++ L++W +L +VP + LV+K S + + + + GL+ R
Sbjct: 501 RFGCFNHNRKLSDATLRLWGALLDSVPGASLVLKANASSDPSTQVLLVRRMRRAGLDPER 560
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
V LPL + +H+Q Y+ +D++LD FP G TTTCE+L+MGVP +T+ G+ + + +
Sbjct: 561 VIWLPLAPSHREHLQQYAQVDVALDCFPNGGCTTTCEALWMGVPVITLTGNHYVSRMSTA 620
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
+L GL A ++Y+QLA Q A + L R RD + +P+ D LE
Sbjct: 621 VLRGAGLADWCAATPEQYLQLARQQADRLAELRGNREHWRDQVVHNPLGDAAGLMQHLEQ 680
Query: 539 TYRNM 543
+ +
Sbjct: 681 AFSTL 685
>gi|376003416|ref|ZP_09781227.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira sp. PCC 8005]
gi|375328219|emb|CCE16980.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira sp. PCC 8005]
Length = 744
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/542 (25%), Positives = 237/542 (43%), Gaps = 24/542 (4%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVE----CYQMALSIKPNFSQSLNNL 72
AI ++ P E N+L ++ D + + +E Y + +I QS L
Sbjct: 216 AIELCQIGLQLAPRSRELLNSLAALFTDIGDYPQGIEYAKRAYSVVETIPEKLCQSFTIL 275
Query: 73 GVVYTVQGKMDAAAEMIEK-AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+ T G D +++E+ + + E NLG + + L I ++ +D
Sbjct: 276 KALLTAGGYWDELWDVVEQHKLLIDQLIVEHPKNLGT---SSMGVGLYITSFYFAYIVDN 332
Query: 132 DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPE-RPLVIGY 190
N + ++ + + + + F + + ++TS P R L IGY
Sbjct: 333 PRENITIRKQISQ--VCQSNMEIAFP------QLITKFRGRHTSLRQGVQPSPRKLKIGY 384
Query: 191 VSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYG 250
VS HSV + + Y D N+++ Y + I+ + I + Y
Sbjct: 385 VSSCLRRHSVGWLARSLFQYGDRHNFEIYTYMTEYRVFYDPIQ-EWYIANSDHIHK--YS 441
Query: 251 IDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRI 310
+ +A + D+IDILV++ T +N +MA +PAP+QVTW+G+ + + +PT+DY I
Sbjct: 442 SVKIDLAEQIYADQIDILVDMDSLTTSNMSAIMALKPAPIQVTWLGW-DASAVPTVDYFI 500
Query: 311 TDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFGSFNNLAK 368
D P ++ + E + RLP+ +L + P L + I + K
Sbjct: 501 ADPYVLPENAQEYYQETIWRLPQTYLAVDGFEVSVPTMTRADLEIPDDAIVYLGLQRGPK 560
Query: 369 ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLN 428
P + ++ IL VPNS +VK DS+ F Q G+ R+ + + L
Sbjct: 561 YNPHIAKLQLEILREVPNSYFLVKGFG-QQDSLNQFFFDIANQQGITRERIKFITPVKLE 619
Query: 429 HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL 488
+H + D+ LDT+PY G TTT E+L+MG+P VT G A +++ G+
Sbjct: 620 EEHRANLLIADVVLDTYPYNGATTTMETLWMGIPLVTRVGEQFAARNSYTMMMNAGITEG 679
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
IA ++EYV+ ++L +D ++ L +P+ +G+ F +E Y+ MW RY
Sbjct: 680 IAWTDEEYVEWGVRLGTDERLRQDISWKLHKSRRTAPLWNGKQFTRDMEKAYQEMWQRYI 739
Query: 549 KG 550
G
Sbjct: 740 DG 741
>gi|425471484|ref|ZP_18850344.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC (fragment)
[Microcystis aeruginosa PCC 9701]
gi|389882649|emb|CCI36920.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC (fragment)
[Microcystis aeruginosa PCC 9701]
Length = 404
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 194/398 (48%), Gaps = 10/398 (2%)
Query: 164 KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA 223
KR + L ++ ++++++ L IGY+ D+ H S+ +++ HD N++++ YS
Sbjct: 12 KRQLALGTKPLNFNHSRTRSGRLKIGYLCHDFRNHPTSHLMQSVFGLHDRNNFEIIAYSY 71
Query: 224 VVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMM 283
++ +R ++ + DI + + A + +D + ILV+L G+ + ++
Sbjct: 72 GPDDGSE---YRRRIANDCDRFYDIATLSITESAQRIFDDGVHILVDLMGYIDKARTQIL 128
Query: 284 ACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC--YTPS 341
A +PAP+QV ++ YP T G IDY I D + PPE+ E+L+ LP+ + Y
Sbjct: 129 ALKPAPIQVNYLVYPGTMGADFIDYIIGDGIVTPPESADNFSEKLVILPDSYQANDYQQI 188
Query: 342 PEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS 400
+ PV + L F FN+ KI P++ VW +IL VP S L + + ++
Sbjct: 189 ISSKPVTRSQYGLPESGFVFCCFNHTYKIEPQIFTVWMQILANVPGSVLWLFSRVAEAEA 248
Query: 401 VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG 460
R + G+E R+ + + +H+ + L D+ LDT Y TT ++L+ G
Sbjct: 249 NLRR---EAQARGIEGDRL-IFAHLQPKPEHLARHQLADLFLDTLYYNAHTTGSDALWAG 304
Query: 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDL 520
+P +T G+ VG SLLT +GL LI KN +EY LA+ LA L ++ L
Sbjct: 305 LPIITCRGATFPSRVGASLLTAIGLPELITKNLEEYKNLAINLAKSPDKLHEIKQKLAQN 364
Query: 521 MSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
P+ D F LE YR MW Y G P + R+
Sbjct: 365 RLTYPLFDTLLFTRNLEKAYRTMWDIYAAGKSPEMIRI 402
>gi|126737924|ref|ZP_01753654.1| TPR repeat protein [Roseobacter sp. SK209-2-6]
gi|126721317|gb|EBA18021.1| TPR repeat protein [Roseobacter sp. SK209-2-6]
Length = 603
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 144/543 (26%), Positives = 237/543 (43%), Gaps = 46/543 (8%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
+L+KA ALS P L G VY Q +D A A+ +P N++
Sbjct: 59 DLNKARSIVDEALSYSPKNINLLRLSGDVYLQQQNLDQALLAYMDAMGIDPFNTSVLNSI 118
Query: 107 GVLY------RDAGSISLAI------DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
G L +DA LA DAY + + +N I DD
Sbjct: 119 GSLLLIMKNQKDANGFFLAAHQTDRKDAYAAYNWVHTSMHLSDWGFFEKLNDILRLGDDT 178
Query: 155 --------LFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLV----------IGYVSPDYF 196
L D G +R+ ++ + R V IG+ S D++
Sbjct: 179 PLNVQPFTLLAISDDPGLHKLRVKARCKILSDAVKENRKFVRSSVVGRKIRIGFFSGDFY 238
Query: 197 THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKV 256
+H+ + D ++VV+Y D + ++KV I+R + + E ++
Sbjct: 239 SHATMLLLGDFFELLDKDRFEVVIYDFGPITDDE---HQQKVKNSAYIYRRVKELSEHEL 295
Query: 257 AAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLAD 316
+ RED +DI V++ G+T N ++ + A + APVQV ++GYP T+GL +DY + D +
Sbjct: 296 VQLSREDCLDIAVDMKGYTRNGRMAVFAERAAPVQVAYLGYPGTSGLGPVDYFVADEVTV 355
Query: 317 PPETKQKHVEELIRLPECFLCYTPS------PEAGPVCPTPALTNGFITFGSFNNLAKIT 370
P +Q E+++ +P+ CY P+ P+ P L G F S NN K+T
Sbjct: 356 PQSQRQHFSEKIMYMPD---CYQPNDRNRKQPDVVPSRTELGLPEGKFIFCSLNNPNKVT 412
Query: 371 PKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430
P VW ++LC VP S L + + +++ G+ R+ + ++ D
Sbjct: 413 PAEFDVWMKLLCNVPESVLWILAP---NEEIKNNLTREANARGVGGERLIFAERVSMD-D 468
Query: 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA 490
H+ D+ LD F TT E+++ GVP VT AG+ A V S++T +G L+
Sbjct: 469 HLARMRQADLFLDAFNCNAHTTASEAVWAGVPLVTKAGNQFAARVAASVVTAIGCPDLVT 528
Query: 491 KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
+ DEY LA +LA++ + LR+ L+D + +P+ D +++A E RY +G
Sbjct: 529 ETIDEYYDLAYKLATEADTYSELRLRLQDNLLTTPLYDSESYARNFEKLMEMAILRYEEG 588
Query: 551 DVP 553
P
Sbjct: 589 AKP 591
>gi|390440632|ref|ZP_10228858.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC (fragment)
[Microcystis sp. T1-4]
gi|389836094|emb|CCI32984.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC (fragment)
[Microcystis sp. T1-4]
Length = 450
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 194/398 (48%), Gaps = 10/398 (2%)
Query: 164 KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA 223
KR + L ++ ++++++ L IGY+ D+ H S+ +++ HD N++++ YS
Sbjct: 58 KRQLALVTKPLNFNHSRTRSGRLKIGYLCHDFRNHPTSHLMQSVFGLHDRNNFEIIAYSY 117
Query: 224 VVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMM 283
++ +R ++ + DI + + A + +D + ILV+L G+ + ++
Sbjct: 118 GPDDGSE---YRRRIANDCDRFYDIATLSITESAQRIFDDGVHILVDLMGYIDKARTQIL 174
Query: 284 ACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC--YTPS 341
A +PAP+QV ++ YP T G IDY I D++ PP++ E+L+ LP+ + Y
Sbjct: 175 ALKPAPIQVNYLVYPGTMGADFIDYIIGDAIVTPPKSADNFTEKLVILPDSYQANDYQQI 234
Query: 342 PEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS 400
+ PV + L F FN+ KI P++ VW IL VP S L + + ++
Sbjct: 235 ISSKPVTRSHYGLPESGFVFCCFNHTYKIEPQIFTVWMEILANVPGSVLWLFSRVAEAEA 294
Query: 401 VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG 460
R + G+E R+ + + +H+ + L D+ LDT Y TT ++L+ G
Sbjct: 295 NLRR---EAQARGIEGDRL-IFAHLQPKLEHLARHQLADLFLDTLYYNAHTTGSDALWAG 350
Query: 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDL 520
+P +T G+ VG SLLT +GL LI KN +EY LA+ LA L ++ L
Sbjct: 351 LPIITCPGATFPSRVGASLLTAIGLPELITKNLEEYKNLAINLAKSPDKLHEIKQKLAQN 410
Query: 521 MSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
P+ D F LE YR MW Y G P + R+
Sbjct: 411 RLTYPLFDTLRFTRNLEKAYRTMWDIYAAGKSPEMIRI 448
>gi|385785603|ref|YP_005816712.1| hypothetical protein EJP617_01440 [Erwinia sp. Ejp617]
gi|310764875|gb|ADP09825.1| conserved uncharacterized protein [Erwinia sp. Ejp617]
Length = 1127
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 146/547 (26%), Positives = 250/547 (45%), Gaps = 58/547 (10%)
Query: 18 IVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYT 77
I+F+ L + +E L +Y +L + C Q A+ + + ++ + +Y+
Sbjct: 613 ILFHHL-LKLDDANSELWLKLSGLYNSAHDLAREERCLQKAIQRDADNAINMLRMATLYS 671
Query: 78 VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137
G+++ A + KA+ + A N +Y S A+ A E+
Sbjct: 672 HTGRLEEAKALCRKALKGQLS-ALTRANAQAMYVFILSHDAALTAAEK------------ 718
Query: 138 QNRLLAMNYINEGHDDKLFEAHRDWGK---RFMRLYSQYTSWDNTKDPERPLVIGYVSPD 194
F AHR +G+ R+ R + + IG+VS D
Sbjct: 719 ------------------FLAHRQFGQLAQRWARAVMPTNRLQQPRGEREKIRIGFVSGD 760
Query: 195 YFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEK 254
+H V +F+ + + Y++ Y A K DA T E ++R + ++
Sbjct: 761 LNSHPVHHFVWPVWKTLNRERYELYAY-ATGKEDAVT----EGYQSSASVFRHVAALNAV 815
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT-DS 313
++A + ED ID+L++L+G T N+L A +PAP+Q++WIG+ TTGL +DY I
Sbjct: 816 ELARQISEDGIDVLIDLSGFTNGNRLLSFALKPAPIQMSWIGFVGTTGLQEMDYYIVYHG 875
Query: 314 LADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKV 373
+A+P E E+L+ LP L + A + P PAL NG +T G+FN K+TP++
Sbjct: 876 MAEPGELDGIFSEKLVSLPSAKL-FEYCATAPAINPLPALKNGHLTLGNFNRPQKLTPEL 934
Query: 374 LQVWARILCAVPNSRLVVKCKPFCCD-SVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
L WA IL A+P++RL+ F D + R+L+ + + G++ + L + +
Sbjct: 935 LDCWANILLALPDARLLFG---FMADQQMSDRYLAEMTRRGVKPEQ-----LAFRSKQNF 986
Query: 433 QAYSLM----DISLDTFPYAGTTTTCESLYMGVPCVT-MAGSVHAHNVGVSLLTKVGLKH 487
AY M DI LD+ PY+ TT +++MGVP +T + GS + +++ T + L
Sbjct: 987 AAYMAMHQEVDILLDSHPYSAGTTAQHAVWMGVPLITAIEGSAVSRTTAMAMKT-LNLDE 1045
Query: 488 LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
+ + DEY Q + S AL +R S+R +++ N A E +W R+
Sbjct: 1046 FVCHSLDEYAQKVIAWNSRYQALDAIRQSMRARIAQRENAHSHN-AYYFEQMIDAVWQRH 1104
Query: 548 CKGDVPS 554
G P+
Sbjct: 1105 LAGQPPA 1111
>gi|345869929|ref|ZP_08821884.1| Tetratricopeptide TPR_1 repeat-containing protein [Thiorhodococcus
drewsii AZ1]
gi|343922316|gb|EGV33018.1| Tetratricopeptide TPR_1 repeat-containing protein [Thiorhodococcus
drewsii AZ1]
Length = 693
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 152/544 (27%), Positives = 242/544 (44%), Gaps = 28/544 (5%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
AI Y A P A A N LG +D N+ A Y+ AL ++P F NL ++
Sbjct: 152 AIERYRAALRLAP-SARAYNALGAALQDWGNVRLARASYRRALKLEPGFELPKYNLAQLH 210
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG----------SISLAIDAYEQC 126
QG++ AA E+A+A+ P + +L ++ R ++S+A + Y
Sbjct: 211 DNQGELQAARIYYEQALASTPENIKLRYHLEMVRRKQADWSDAETRLETLSVATERY--- 267
Query: 127 LKIDPDSRNAGQNRLLAMNY-INEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERP 185
++ D + G L A+ + + L E R R + P+ P
Sbjct: 268 --LERDGDDEGPPLLGALAFALPPSRYRALAERISAQLSRQARALADPFEAPPEPGPD-P 324
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+SPD+ H+V I +H + ++ YS D T E+V +
Sbjct: 325 LRIGYLSPDFRCHAVGTLIAGLFEHHRRSDVEIHAYSLTPVRDEWT----ERVRAGCDHF 380
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
D+ ++A + D I ILV+L G+T +++ ++A +PAPVQ+ ++GYP T G
Sbjct: 381 SDVSLKSPLEIARRIHGDGIHILVDLAGYTTHSRPLVLALRPAPVQIQFLGYPGTLGADY 440
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA--LTNGFITFGSF 363
+ + I D PPE + + E ++RLP + PS A P A L + +
Sbjct: 441 VTHIIADRHLIPPEHEPFYRERIVRLPNAWASAPPS-VAEPAGDRAACGLPESAMVYCCL 499
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N + KI V +W RIL VP S L + + R R G++ R+ P
Sbjct: 500 NGIYKIESGVFALWMRILERVPESVLWLLDGGESGSNARLR--EAARTAGIDPDRLIFAP 557
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
+ +++ Y L D+ LDT Y T +L G+P +T G +A +G SL V
Sbjct: 558 -KRAHAEYLAHYRLADLFLDTLVYNAGATAVGALAAGLPVLTCPGGHYAARMGASLSHAV 616
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
GL L+ + ++YV+ A+ L D T A L+ L + +P+ D F LE+ YR +
Sbjct: 617 GLPELVCASPEDYVEQAVALGRDPTRRAELKRRLAAQLDSAPLFDPGAFVAELEAAYRRL 676
Query: 544 WHRY 547
W Y
Sbjct: 677 WEEY 680
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 3 NLGVAYGEMLKFD--MAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
NLG + LK D A+ Y A P NL I D A Y+ AL
Sbjct: 70 NLGGLW--QLKGDSTRALAAYRHAIALQPDLYLGHYNLAKILTAEDRFGSAEAAYREALR 127
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KP+ + + G +Y G + A E A+ P+ A AYN LG +D G++ LA
Sbjct: 128 LKPDQAGIHLDCGQLYHRYGFVPKAIERYRAALRLAPS-ARAYNALGAALQDWGNVRLAR 186
Query: 121 DAYEQCLKIDP 131
+Y + LK++P
Sbjct: 187 ASYRRALKLEP 197
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
AI + A P NNL ++ +L+ A+ Y+ AL + P+ + NLG ++
Sbjct: 16 AIGHFRAALELQPDRLAPYNNLANALQETGDLEGALALYRKALELAPDHAVLHCNLGGLW 75
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
++G A AIA P + NL + A AY + L++ PD
Sbjct: 76 QLKGDSTRALAAYRHAIALQPDLYLGHYNLAKILTAEDRFGSAEAAYREALRLKPD 131
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
++ A+ ++ AL ++P+ NNL G ++ A + KA+ P +A + NL
Sbjct: 12 DITTAIGHFRAALELQPDRLAPYNNLANALQETGDLEGALALYRKALELAPDHAVLHCNL 71
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPD 132
G L++ G + A+ AY + + PD
Sbjct: 72 GGLWQLKGDSTRALAAYRHAIALQPD 97
>gi|326386010|ref|ZP_08207634.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326209235|gb|EGD60028.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 882
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 153/582 (26%), Positives = 247/582 (42%), Gaps = 62/582 (10%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+V ++A N +A N LG+ + A + L+++P+ L++L
Sbjct: 310 ALVSAQMAARHNSAAPQAHNVLGLAHLRLGEYGAAATAFGQGLALRPDDPDMLSHLATAL 369
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAY----NNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+ D A + +A+ P + A +LG R A + L +E+ L + P+
Sbjct: 370 AELERHDEADRLWARALTLAPNHDGALFVQGASLGSRDRHAEAARL----FERALALRPE 425
Query: 133 SRNAGQNRLLAMNYINEGHDDKLF------EAH--------------RDWGKRFMRLYSQ 172
+ A++++ + + F EA D R R +
Sbjct: 426 RTAVRVEWIHALSHLCDWRAGEEFARLTTEEAEAAGEPVPFHALITLEDDPARLRRRAER 485
Query: 173 YTSWD-----------NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY 221
Y + PE L IGY S D+ H+ + + HD + +++ Y
Sbjct: 486 YAQTHYGHIVPVAFPPASAIPEGRLKIGYFSADFHDHATMFLMSGLFREHDREQFEIHCY 545
Query: 222 S-AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKL 280
S V+ A RE ++ + + ++ E ++AA+ RE I + V+L G T +
Sbjct: 546 SFGTVREGA----LREALIGQVDRFHEVGNRTESEIAALAREHGIAVAVDLKGLTGFARF 601
Query: 281 GMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP 340
G+ A + APVQ+ ++G+P TTG IDY + D + P E + + E++IRLP Y
Sbjct: 602 GLFAHRAAPVQIGYLGFPATTGASFIDYILADPVIIPEEERAHYTEQVIRLPH---SYQA 658
Query: 341 SPEAGPVCPTP------ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKC 393
+ P+ L G F FN KI W RIL AV NS L ++
Sbjct: 659 NDNRRPIATDAGSRADWGLPEGAFVFCCFNKGYKIARDDFAGWMRILAAVENSVLWLISL 718
Query: 394 KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD-HMQAYSLMDISLDTFPYAGTTT 452
P ++R G++ R+ P HD H+ ++ D+ LDT Y TT
Sbjct: 719 SPETEQALR----KAAADAGVDPARLIFAPRA--PHDVHLARHAHADLGLDTLRYNAHTT 772
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
++L+ G+P VT AG A VG SL VGL L+ + + LA+ LA D LA
Sbjct: 773 ASDALWAGLPVVTRAGRCFAARVGASLNHAVGLSDLVTHDAAGFESLAIALARDPERLAA 832
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
+R L D K+P+ D F +E+ YR W R+ G P+
Sbjct: 833 VRARLAD-RDKTPLFDTAGFTRAIEAAYRAAWQRHADGLPPA 873
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
+P +A + +GV+ +A ++ A ++P ++ LGV QGK D AA
Sbjct: 42 HPSAFDAAHLVGVLQATSGAFAQAETAFRRAADLRPADAEIHFMLGVTLQQQGKADEAAA 101
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
+A + NP + A LG ++ G A+DA E+ ++++P S +A N L + I
Sbjct: 102 AFRRASSLNPQHELALLALGTTLQEIGRTGEALDALERLIRLNPASLDAHNN--LGVALI 159
Query: 148 NEGHDDK 154
G DK
Sbjct: 160 QAGQPDK 166
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+GV F A + A P AE LGV + + D+A ++ A S+ P
Sbjct: 52 VGVLQATSGAFAQAETAFRRAADLRPADAEIHFMLGVTLQQQGKADEAAAAFRRASSLNP 111
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+L LG G+ A + +E+ I NP +A+NNLGV AG A A
Sbjct: 112 QHELALLALGTTLQEIGRTGEALDALERLIRLNPASLDAHNNLGVALIQAGQPDKAAAAL 171
Query: 124 EQCLKIDPDS 133
E L + PD+
Sbjct: 172 ETALHLRPDA 181
>gi|224155210|ref|XP_002337576.1| predicted protein [Populus trichocarpa]
gi|222839596|gb|EEE77933.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 134/433 (30%), Positives = 205/433 (47%), Gaps = 22/433 (5%)
Query: 44 DRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY 103
DR +A+ ++ P S+ ++G VY A E ++ A+ P A
Sbjct: 31 DRAQFLEALSDLAQLVARDPRNSKVWLHIGFVYVRMSIWPQAMEALQMALEIEPRMPNAQ 90
Query: 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN--YINEGHDD---KLFEA 158
L + G E C ID R+A M YI+ K E
Sbjct: 91 RLLALALFSTGR------RQEACDLIDDACRHAKNENTHWMTRAYIHSHTSSDPLKSLEV 144
Query: 159 HRDWGKRFMRLYSQYTSWDNTKD--PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNY 216
RDWG+RF ++ +D P + L +GYV+ D+ HSV++F+ L +H+ N
Sbjct: 145 ARDWGRRFADPLTRNAKPFPPRDRNPRKKLKVGYVTADFRQHSVAFFMRPVLEHHNPDNV 204
Query: 217 KVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTA 276
++ VYS+ + D T + R V W D + ++ +R D ID+LV+L+G T
Sbjct: 205 EIHVYSSG-RPDKMTEKLRALVPH----WHDAVEQTDDQLYEQIRADGIDVLVDLSGFTL 259
Query: 277 NNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFL 336
++L + A + APVQVTW+GY +T G+ +DYR+ D PP + E L +L
Sbjct: 260 GHRLEVFARRAAPVQVTWLGYMHTLGMKAMDYRLVDGGIAPPSHAPYYSENLFQL-HYMA 318
Query: 337 CYTPSPEAGPVCPTPA-LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 395
Y P PE P+C P L NG T S NN AK+T ++L WA IL A ++ L++ K
Sbjct: 319 SYAP-PEDSPLCEEPPMLRNGHPTLISMNNSAKLTDEMLAAWASILHARQDAHLIIMVKE 377
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCE 455
D+ + ++ G+ RV +L L M+ + DI+LDT P +G TTT
Sbjct: 378 QDADAAQAHMQPRVQLAGMPLDRVSVLHQQPLER-FMELGHIADIALDTSPISGGTTTLH 436
Query: 456 SLYMGVPCVTMAG 468
+L+MG+P V + G
Sbjct: 437 ALWMGLPIVALDG 449
>gi|300693287|ref|YP_003749260.1| hypothetical protein RPSI07_mp0265 [Ralstonia solanacearum PSI07]
gi|299075324|emb|CBJ34618.1| conserved hypothethical protein with TPR repeat domain [Ralstonia
solanacearum PSI07]
Length = 675
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 166/585 (28%), Positives = 256/585 (43%), Gaps = 54/585 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E + A Y A NP +A NLG +Y A+ Y+ AL
Sbjct: 93 NRGNLLAESGDAEQAEHAYLKAIELNPDTPDAWYNLGNLYSRSRQYQAALGPYREALKRV 152
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N++G + G D A + +++A+ P YAEA+ NLG+L+RD + A+DA
Sbjct: 153 AGRPDLHNSMGCACSELGLTDEALQHLQRAVQLAPRYAEAWLNLGLLHRDTRQLKAAVDA 212
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYIN----------EGHDDKLFEAHRDWG-KRFMRL-Y 170
+ I D A LAM ++ E L A R G F+ L
Sbjct: 213 LQHA-AIPGDPSEAQALSELAMVQMSMCDWAAAARSEARLLGLLRAGRATGVAPFVTLAL 271
Query: 171 SQYTSWDN------------------TKDP--ERP--LVIGYVSPDYFTHSVSYFIEAPL 208
T+ D T DP P + +GY+S D+ H+ +Y + L
Sbjct: 272 PNCTASDQRMAAAQATRQAAPAITPVTGDPAPRSPGRIRVGYLSADFHAHATAYLLAGVL 331
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+ D ++ +YS + D R ++ + I + + + A + D +D+L
Sbjct: 332 EHRDASRFETFLYSYGPQTDDDMQR---RLRAACEHFVHIAPLSDGQAAQRIASDDLDLL 388
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI-DYRITDSLADPPETKQKHVEE 327
++L G T + +L + A +PAPV V W+GYP T G + DY I D + P + + E
Sbjct: 389 IDLKGFTKHARLDIGAMRPAPVLVNWLGYPGTLGSKRLADYLIGDPVVTPVSQQAQFEET 448
Query: 328 LIRLPECFLCYTPSPEAGPVCPTPALTN------GFITFGSFNNLAKITPKVLQVWARIL 381
L +P C Y P+ P P + GF+ F FN KIT W IL
Sbjct: 449 LALMPHC---YQPTDRRRETLPPPDRADVGLPADGFV-FCCFNQAYKITEARANTWFTIL 504
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
P S L + +P S + L + + G+ES R+ P + +H+ L D++
Sbjct: 505 SRTPGSVLWL-LEPDA--SAKAALLESARRHGVESHRLVFAPQVA-QREHIARLQLADLA 560
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY TT + L+ GVP +T G A V S+L GL L+ E++YV A+
Sbjct: 561 LDTFPYTSHTTASDLLWAGVPLLTRMGDTMASRVAASILQAAGLHDLVVTTEEDYVDAAV 620
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
+LA D ALA++R+ + +P+ D + FA LE+ + + R
Sbjct: 621 RLAGDAQALASVRLHAQ-AARNTPLFDTRTFARDLETLFGRIVER 664
>gi|344171339|emb|CCA83825.1| conserved hypothethical protein with TPR repeat domain [blood
disease bacterium R229]
Length = 646
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 162/567 (28%), Positives = 251/567 (44%), Gaps = 54/567 (9%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A NP +A NLG +Y A+ Y+ AL N++G + G
Sbjct: 82 YLKAIELNPDTPDAWYNLGNLYSRSRQYQAALGPYREALKRVAGRPDLHNSMGCACSELG 141
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
D A + +++A+ P YAEA+ NLG+L+RD + A+DA + I D A
Sbjct: 142 LTDEALQHLQRAVQLAPRYAEAWLNLGLLHRDTRQLKAAVDALQHA-AIPGDPSEAQALS 200
Query: 141 LLAMNYIN----------EGHDDKLFEAHRDWG-KRFMRL-YSQYTSWDN---------- 178
LAM ++ E L A R G F+ L T+ D
Sbjct: 201 ELAMVQMSMCDWAAAARSEARLLGLLRAGRATGVAPFVTLALPNCTASDQRMAAAQATRQ 260
Query: 179 --------TKDP--ERP--LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVK 226
T DP P + +GY+S D+ H+ +Y + L + D ++ +YS +
Sbjct: 261 AAPAITPVTGDPAPRSPGRIRVGYLSADFHAHATAYLLAGVLEHRDASRFETFLYSYGPQ 320
Query: 227 ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
D R ++ + I + + + A + D +D+L++L G T + +L + A +
Sbjct: 321 TDDDMQR---RLRAACEHFVHIAPLSDGQAAQRIASDDLDLLIDLKGFTKHARLDIGAMR 377
Query: 287 PAPVQVTWIGYPNTTGLPTI-DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG 345
PAPV V W+GYP T G + DY I D + P + + E L +P C Y P+
Sbjct: 378 PAPVLVNWLGYPGTLGSKRLADYLIGDPVVTPVSQQAQFEETLALMPHC---YQPTDRRR 434
Query: 346 PVCPTPALTN------GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD 399
P P + GF+ F FN KIT W IL P S L + +P
Sbjct: 435 ETLPPPDRADVGLPADGFV-FCCFNQAYKITEARANTWFTILSRTPGSVLWL-LEPDA-- 490
Query: 400 SVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM 459
S + L + + G+ES R+ P + +H+ L D++LDTFPY TT + L+
Sbjct: 491 SAKAALLESARRHGVESHRLVFAPQVA-QREHIARLQLADLALDTFPYTSHTTASDLLWA 549
Query: 460 GVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRD 519
GVP +T G A V S+L GL L+ E++YV A++LA D ALA++R+ +
Sbjct: 550 GVPLLTRMGDTMASRVAASILQAAGLHDLVVTTEEDYVDAAVRLAGDAQALASVRLHAQ- 608
Query: 520 LMSKSPVCDGQNFALGLESTYRNMWHR 546
+P+ D + FA LE+ + + R
Sbjct: 609 AARNTPLFDTRTFARDLETLFGRIVER 635
>gi|434386708|ref|YP_007097319.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Chamaesiphon minutus PCC 6605]
gi|428017698|gb|AFY93792.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Chamaesiphon minutus PCC 6605]
Length = 738
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 181/364 (49%), Gaps = 11/364 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY++ + +HSV + YHD QN+++ Y D F ++ +K
Sbjct: 367 IGYLASTFRSHSVGWLCRWLFQYHDRQNFQIFTYGINQDPDDS---FYQQWFRKTSHVSY 423
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
+ ++ A ++ D+IDIL++L T + ++A +PAPVQV+W+G+ + TGLPT+D
Sbjct: 424 CFSDKPDEIIAQIKADEIDILIDLDSLTLSLTTRILAAKPAPVQVSWLGW-DATGLPTVD 482
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFGSFNN 365
Y I D+ P ++ + E++ RLP +L P L + I + S
Sbjct: 483 YFIADNYVLPDNAQEYYQEKIWRLPHSYLAVKGFEIGTPTLKRRDLNIPDDAIIYWSGQV 542
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVK--CKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
K P +++ RIL +VPNS ++K P D +R F + G+E R+ L
Sbjct: 543 GHKRHPDTVRLQLRILKSVPNSYFLIKGDTDP---DIIREFFGKIAAEEGVEFDRLRFLG 599
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
+ + H + D++LDT+PY G TTT E L+MG+P VT G + +
Sbjct: 600 NVPDEYTHRANLGIADVALDTYPYNGATTTLEILWMGIPLVTRVGQQFIARNSYTFMLNA 659
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
G++ IA N +EYV+ ++L D +R LR + +PV + + F L +E YR+M
Sbjct: 660 GIEEGIAWNAEEYVEWGIKLGLDRELRLEIREKLRVGRTTAPVWNAKQFTLDMEQAYRDM 719
Query: 544 WHRY 547
W +Y
Sbjct: 720 WAKY 723
>gi|418056785|ref|ZP_12694836.1| Tetratricopeptide TPR_2 repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
gi|353207557|gb|EHB72964.1| Tetratricopeptide TPR_2 repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
Length = 818
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/592 (25%), Positives = 253/592 (42%), Gaps = 54/592 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG +++ AI Y A +P A+A N+ + + ++A+ YQ L+I
Sbjct: 233 DLGDYLRTQWRYEDAIDVYSRAALADPASADALLNMALAFTSLGRKEEALASYQAGLAID 292
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ +++ ++G + A + EKAI PT A A+ NL V ++ A A
Sbjct: 293 PDRAEAYADVGNLLRGMRMSTGAIQAYEKAIELEPTLAVAHYNLAVTLKERERYDEARAA 352
Query: 123 YEQCLKIDPDS-----RNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR---FMRLYSQYT 174
+ + ++ PDS A R+L + + + + R G F + + T
Sbjct: 353 FIKSVEHAPDSIVHRFELANLRRVLCDWDGLDREEQECLDQFRQRGAHVAPFQLISTPAT 412
Query: 175 SWDNTKDPER------------------------PLVIGYVSPDYFTHSVSYFIEAPLVY 210
D + +R + +G++S D+F H+ + + L
Sbjct: 413 RADQLEAGQRHAATLAAPDALRFKDHRGRLGMGQRIRVGFLSADFFNHATAMLLVEVLEN 472
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
D +++ Y D T R +++ + I + ++ A + ED IDILV+
Sbjct: 473 IDRSRFELFGY--CFSPDDGT-DLRRRIIAAFDRYVQIGTMTDRSAAHAIHEDGIDILVD 529
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
L G+T + + ++ +PAP+QV ++GYP T G+ IDY +TD + P E + + E ++
Sbjct: 530 LKGYTRDGRPEILTYRPAPIQVNYLGYPCTMGMDGIDYILTDPIVAPMEHQAGYSERIVH 589
Query: 331 LPECFLCYTPSPEAGPVCPTPALTNGF------ITFGSFNNLAKITPKVLQVWARILCAV 384
LP+ CY P+ + TP F F SFNN K+ + VW +L V
Sbjct: 590 LPD---CYQPNDRKRKISETPVTRADFGLPEDAFVFCSFNNSYKLNATMFDVWMSLLRRV 646
Query: 385 PNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDIS 441
S L + C R G++ R+ LP+ +H+ + L D+
Sbjct: 647 AGSVLWLLVPTSAC---RENLRREAAARGVDPDRLVFASRLPIA----EHLARHRLADLF 699
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LD P TT ++L+ G+P +T G + V SLLT GL L+ + +Y + AL
Sbjct: 700 LDALPCNAHTTASDALWAGLPVLTAMGETFSGRVAASLLTAAGLPELVTGSLADYAEAAL 759
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
LA D T LA+LR L +P+ D + ES M G+ P
Sbjct: 760 ALAQDKTKLADLRAKLARQRETAPLFDSTRYTRYFESALSTMAEIARAGEPP 811
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A+ N+LG + + + A++ Y A P + +L N+ + +T G+ + A +
Sbjct: 228 AKGLNDLGDYLRTQWRYEDAIDVYSRAALADPASADALLNMALAFTSLGRKEEALASYQA 287
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+A +P AEAY ++G L R + AI AYE+ ++++P
Sbjct: 288 GLAIDPDRAEAYADVGNLLRGMRMSTGAIQAYEKAIELEP 327
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 9 GEMLKFDMAIVFYELAFHFNPHCAEACNNLGVI-YKDRDNLDKAVECYQMALSIKPNFSQ 67
GE LK +MA + P ++LG+I YK D + +AVE + +L P + Q
Sbjct: 38 GEWLKSEMA---HRRVLAKAPGHPPTLHHLGLIAYKCNDGV-RAVEYIRQSLDSDPRYHQ 93
Query: 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCL 127
+ NL ++ + A E ++ +A P + A+ LG L R A + + A++AY L
Sbjct: 94 AWLNLAIILADLKRSKEAIEACKQCVALQPKNSAAFEVLGNLLRVAQNDAEAMEAYLTSL 153
Query: 128 KIDPDSRNAGQNRLLA 143
++ P+ Q R+LA
Sbjct: 154 RLQPE-----QPRVLA 164
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
++ LN+LG Q + + A ++ +A A+P A+A N+ + + G A+ +Y
Sbjct: 226 ELAKGLNDLGDYLRTQWRYEDAIDVYSRAALADPASADALLNMALAFTSLGRKEEALASY 285
Query: 124 EQCLKIDPDSRNA 136
+ L IDPD A
Sbjct: 286 QAGLAIDPDRAEA 298
>gi|344174927|emb|CCA87561.1| conserved hypothethical protein with TPR repeat domain [Ralstonia
syzygii R24]
Length = 675
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 165/579 (28%), Positives = 254/579 (43%), Gaps = 54/579 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E + A Y A NP +A NLG +Y A+ Y+ AL
Sbjct: 93 NRGNLLAESGDAEQAEHAYLKAIELNPDTPDAWYNLGNLYSRSRQYQAALGPYREALKRV 152
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N++G + G D A + +++A+ P YAEA+ NLG+L+RD + A+DA
Sbjct: 153 AGRPDLHNSMGCACSELGLTDEALQHLQRAVQLAPRYAEAWLNLGLLHRDTRQLKAAVDA 212
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYIN----------EGHDDKLFEAHRDWG-KRFMRL-Y 170
+Q I D A LAM ++ E L A R G F+ L
Sbjct: 213 LQQA-AIPGDPSEAQALSELAMVQMSMCDWAAAARSEARLLGLLRAGRATGVAPFVTLAL 271
Query: 171 SQYTSWDN------------------TKDP--ERP--LVIGYVSPDYFTHSVSYFIEAPL 208
T+ D T DP P + +GY+S D+ H+ +Y + L
Sbjct: 272 PNCTASDQRMAAAQATRQAAPAITPVTGDPAPRSPGRIRVGYLSADFHAHATAYLLAGVL 331
Query: 209 VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDIL 268
+ D ++ +YS + D R + + I + + + A + D +D+L
Sbjct: 332 EHRDTSRFETFLYSYGPQTDDDMQRRLRAACEH---FVHIAPLSDGQAAQRIASDDLDLL 388
Query: 269 VELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI-DYRITDSLADPPETKQKHVEE 327
++L G T + +L + A +PAPV V+W+GYP T G + DY I D + P + + E
Sbjct: 389 IDLKGFTKHARLDIGAMRPAPVLVSWLGYPGTLGSKRLADYLIGDPVVTPVSQQAQFEET 448
Query: 328 LIRLPECFLCYTPSPEAGPVCPTPALT------NGFITFGSFNNLAKITPKVLQVWARIL 381
L +P C Y P+ P P +GF+ FN KIT W IL
Sbjct: 449 LALMPHC---YQPTDRRRETLPPPDRAGVGLPADGFV-LCCFNQAYKITEARANTWFTIL 504
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
P S L + +P S + L + G+ES R+ P + +H+ L D++
Sbjct: 505 SRTPGSVLWL-LEPDA--SAKAALLERARRHGVESHRLVFAPQVA-QREHIARLQLADLA 560
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDTFPY TT + L+ GVP +T G A V S+L GL L+ E++YV A+
Sbjct: 561 LDTFPYTSHTTASDLLWAGVPLLTRMGDTMASRVAASILQAAGLHDLVVTTEEDYVDAAV 620
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+LA D ALA++R+ + ++P+ D + FA LE+ +
Sbjct: 621 RLAGDAQALASVRLHAQ-AARETPLFDTRTFARDLETLF 658
>gi|376003415|ref|ZP_09781226.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira sp. PCC 8005]
gi|375328218|emb|CCE16979.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira sp. PCC 8005]
Length = 746
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 185/378 (48%), Gaps = 25/378 (6%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIRFREKVMKK 241
+ L IGY+S + HSV + +HD +++ Y A + DA + E+ K
Sbjct: 381 KTLKIGYISYCFRRHSVGWISRWLFQHHDRHQFEIYAYMIGAENRQDALQNWYAEQATKS 440
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
YGI +VA + ED+IDILV+L T N +MA +PAPVQVTW+G+ + +
Sbjct: 441 YQ-----YGIVSTEVAEQISEDQIDILVDLDSLTLTNTCAIMALKPAPVQVTWLGW-DAS 494
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL-------- 353
+PT+DY I D P + + E + RLP+ ++ G P+L
Sbjct: 495 AIPTVDYFIADPYVLPENAQDYYSETIWRLPQTYVAV-----GGFEVGIPSLRRQDINIP 549
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD-SVRHRFLSTLEQL 412
N + F + K P++ Q+ +IL VPNS L++K F + S+ F E+
Sbjct: 550 ENAIVYFTAQRG-PKYNPELAQLQMQILKQVPNSYLIIKG--FDKEQSIAGLFFELAEEQ 606
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
G+ ++ L +LL H ++ D+ LD++PY G TTT E+L+MG+P VT G A
Sbjct: 607 GVSREQLRLTGSVLLEQTHRANLAIADVVLDSYPYNGATTTLETLWMGIPLVTRVGEQFA 666
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
+++ G+ IA ++EYV+ ++L +D ++ LR +P+ + + F
Sbjct: 667 ARNSYTMMMNAGITEGIAWTDEEYVEWGVRLGTDERLRQDISWKLRKSRRTAPLWNSKQF 726
Query: 533 ALGLESTYRNMWHRYCKG 550
+E Y+ MW Y G
Sbjct: 727 TREMEKAYQEMWTIYTSG 744
>gi|296448170|ref|ZP_06890068.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
gi|296254301|gb|EFH01430.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
Length = 676
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 177/372 (47%), Gaps = 17/372 (4%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGYVS D H+V + + + HD ++++ Y + A+T RE++ W +
Sbjct: 259 IGYVSSDLREHAVGFAMTDVMETHDRAHFEIHAYYCGI---ARTDPTRERIAAAVDRWTE 315
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
I G+ +++ A + +D + IL++L G+T + + M A +PAP+ V W G+P T G P
Sbjct: 316 INGMSDEEAARKIADDGVHILIDLNGYTKDARTKMFAMRPAPIVVNWFGFPGTMGTPYHH 375
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEA------GPVCPTPALTNGFITFG 361
Y I DS+ P + + + E+++RLP CY P+ P L F
Sbjct: 376 YVIADSIIVPEDAEIYYSEKVLRLP----CYQPNDRKRVVAAERPSRQEAGLPESAFVFC 431
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
S N + K+T W IL AVP+S L + + R + G+ R+ +
Sbjct: 432 SLNGMQKLTALTFDRWMTILAAVPDSVLWLLTG---TQATNERIRAAASARGVAPERI-V 487
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ N H+ Y L D+ LD FPY TT +SL+MGVP +T G A V SL+
Sbjct: 488 FAQKMPNPRHLARYPLADLFLDNFPYGAHTTAADSLWMGVPILTFPGRSFASRVCASLVR 547
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
G++ L+ + ++YV A++L + LA +R L + + D LE+ YR
Sbjct: 548 AAGVEELVCADAEDYVARAIELGRNPRQLAAIRDKLVAGRDRCALFDTPALVGHLENLYR 607
Query: 542 NMWHRYCKGDVP 553
MW Y G +P
Sbjct: 608 EMWRDYEAGALP 619
>gi|357058678|ref|ZP_09119525.1| hypothetical protein HMPREF9334_01242 [Selenomonas infelix ATCC
43532]
gi|355373469|gb|EHG20787.1| hypothetical protein HMPREF9334_01242 [Selenomonas infelix ATCC
43532]
Length = 485
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 183/342 (53%), Gaps = 17/342 (4%)
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ Y V Y+ +AD T R V + + + ++ A +R D+ID+LV+L G
Sbjct: 154 EQYDVYAYALDDRADGFTESLRGAVN-----YHALANLSIEEQAERIRADEIDVLVDLGG 208
Query: 274 HTANN-KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
HT L ++A +PAPVQ++ IG+ TTG+P +D +TD++ P T++ + EEL+RLP
Sbjct: 209 HTDGGMTLMVLARRPAPVQISGIGWFATTGVPFVDGFLTDNVLSPAGTEEFYSEELLRLP 268
Query: 333 ECFLCYTPSPE--AGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
F +TP A V PA + +TFG F N KI + L+VW RIL +P ++L+
Sbjct: 269 HAFY-FTPDEAMCAHAVAERPA--DAPVTFGVFQNFMKINEECLKVWGRILKKLPQAQLI 325
Query: 391 VKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT 450
++ L +E L L + R+ + D++ Y +DI+LDTFPY G
Sbjct: 326 LQDAAVDSPLRVTTILEMIEGLKLPAKRIFVRT---GKRDYLGDYGDIDIALDTFPYTGG 382
Query: 451 TTTCESLYMGVPCVTMAGSV-HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTA 509
+T +LYMGVP V++ G HA +G ++LT G IA++ Y LA+++A D+ A
Sbjct: 383 ASTATALYMGVPIVSLRGETHHASRLGSAMLTAAGKSAWIAEDARAYENLAVRMAEDIAA 442
Query: 510 LANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
+ R +LR + KS + DG ++ + +W + +GD
Sbjct: 443 VRASRAALRAEVEKSALTDGASYLSAVTGEIERLWAQ--RGD 482
>gi|196232943|ref|ZP_03131792.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196222921|gb|EDY17442.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 413
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 170/351 (48%), Gaps = 13/351 (3%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
D A+ + A P+ A A NLG + KD LD+AV Y A+++ P+F+++ +NLG
Sbjct: 55 DQALALIQRALTLAPNYAAAYMNLGNMLKDGGRLDEAVAAYHRAIALHPDFAEAYHNLGN 114
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
+++ A +AI P AE +NNL + GS+ A AY L + P+
Sbjct: 115 TLCEAERVEEAEAACRRAIEIRPDLAEGWNNLAAVMAAQGSLEEAEAAYRNSLGLQPNQP 174
Query: 135 NAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQY-TSWDNTKDPERPLVIGYVSP 193
+ + + D L E W +RF Q+ N +DP R L IGYVS
Sbjct: 175 AVQSSLIYTLLLRPRLTDAALDEEQAHWNERFGGPSKQFFRPHANDRDPARRLRIGYVSA 234
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDE 253
D+ H + + HD +++ +S V++ D T E + W + +D+
Sbjct: 235 DFREHVIGKNLLPLFKNHDRSRFEIACFSGVIRPDGMT----EAFQQHADHWWNTAAMDD 290
Query: 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD- 312
+A +VR +++DILV+L+ H N+L + A QPAPVQV++ GYP +TGL TI YR++D
Sbjct: 291 GALAELVRSERVDILVDLSQHIIANRLLLFARQPAPVQVSFAGYPASTGLETIGYRLSDR 350
Query: 313 -------SLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG 356
+AD + + E + L E F CY P A PV PA G
Sbjct: 351 WLEGAGEKMADGKWQRARGGTERVFLLESFWCYEPERTALPVSELPARVEG 401
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
L V ++ L +A YQ L+++P ++L+ V+ G+ D A +I++A+ P
Sbjct: 10 LAVRHQLEGRLAEAAGFYQQILAVQPGHVETLHCFAVLLHHTGQRDQALALIQRALTLAP 69
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
YA AY NLG + +D G + A+ AY + + + PD A N
Sbjct: 70 NYAAAYMNLGNMLKDGGRLDEAVAAYHRAIALHPDFAEAYHN 111
>gi|423066869|ref|ZP_17055659.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
gi|406711634|gb|EKD06834.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
Length = 745
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 235/541 (43%), Gaps = 23/541 (4%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVE----CYQMALSIKPNFSQSLNNL 72
AI ++ P E N+L ++ D + + +E Y + +I QS L
Sbjct: 218 AIELCQIGLQLAPRSRELLNSLAALFTDIGDYPQGIEYAKRAYSVVETIPEKLCQSFTIL 277
Query: 73 GVVYTVQGKMDAAAEMIEK-AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+ T G D +++E+ + + E NLG + + L I ++ +D
Sbjct: 278 KALLTAGGYWDELWDVVEQHKLLIDQLIVEHPKNLGT---SSMGVGLYITSFYFAYIVDN 334
Query: 132 DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYV 191
N + I++ L A D +F +S + R L IGYV
Sbjct: 335 PREN-----ITIRKQISQVCQSNLEIACGDIIAKFRGRHSSLRQ--GVQPSPRKLKIGYV 387
Query: 192 SPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGI 251
S HSV + + Y D N+++ Y + I+ + I + Y
Sbjct: 388 SSCLRRHSVGWLARSLWKYGDRHNFEIYTYMTEYRVFYDPIQ-EWYIANSDHIHK--YSS 444
Query: 252 DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
+ +A + D+IDILV++ T+N +MA +PAP+QVTW+G+ + + +PT+DY I
Sbjct: 445 VKIDLAEQIYADQIDILVDMDSFTSNIT-AIMALKPAPIQVTWLGW-DASAVPTVDYFIA 502
Query: 312 DSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFGSFNNLAKI 369
D P ++ + E + RLP+ +L + P L + I + K
Sbjct: 503 DPYVLPENAQEYYQETIWRLPQTYLAVDGFEVSVPTITRADLEIPDDAIVYLGLQKGPKY 562
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429
P + ++ IL VPNS +VK DS F Q G+ + R+ +P + L
Sbjct: 563 NPHIAKLQLEILREVPNSYFLVKGFG-QQDSFSKFFFDIANQQGITTDRIKFIPTVKLEE 621
Query: 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLI 489
+H + D+ LDT+PY G TTT E+L+MG+P VT G A +++ G+ I
Sbjct: 622 NHRANLLIADVVLDTYPYNGATTTMETLWMGIPLVTRVGEQFAARNSYTMMMNAGITEGI 681
Query: 490 AKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
A ++EYV+ ++L +D ++ L +P+ +G+ F +E Y+ MW RY
Sbjct: 682 AWTDEEYVEWGVRLGTDERLRQDISWKLHKSRRTAPLWNGKQFTRDMEKAYQEMWQRYID 741
Query: 550 G 550
G
Sbjct: 742 G 742
>gi|423066870|ref|ZP_17055660.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
gi|406711635|gb|EKD06835.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
Length = 746
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 185/378 (48%), Gaps = 25/378 (6%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIRFREKVMKK 241
+ L IGY+S + HSV + +HD +++ Y A + DA + E+ K
Sbjct: 381 KTLKIGYISYCFRRHSVGWISRWLFQHHDRHQFEIYAYMIGAENRQDALQNWYAEQATKS 440
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
YGI +VA + ED+IDILV+L T N +MA +PAPVQVTW+G+ + +
Sbjct: 441 YQ-----YGIVSTEVAEQISEDQIDILVDLDSLTLTNTCAIMALKPAPVQVTWLGW-DAS 494
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL-------- 353
+PT+DY I D P + + E + RLP+ ++ G P+L
Sbjct: 495 AIPTVDYFIADPYVLPENAQDYYSETIWRLPQTYVAV-----GGFEVGIPSLRRQDINIP 549
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD-SVRHRFLSTLEQL 412
N + F + K P++ Q+ +IL VPNS L++K F + S+ F E+
Sbjct: 550 ENAIVYFTAQRG-PKYNPELAQLQMQILKQVPNSYLIIKG--FDKEQSIAGLFFELAEEQ 606
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
G+ ++ L +LL H ++ D+ LD++PY G TTT E+L+MG+P VT G A
Sbjct: 607 GVSREQLRLTGSVLLEQTHRANLAIADVVLDSYPYNGATTTLETLWMGIPLVTRVGEQFA 666
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
+++ G+ IA ++EYV+ ++L +D ++ LR +P+ + + F
Sbjct: 667 ARNSYTMMMNAGITEGIAWTDEEYVEWGVRLGTDERLRQDISWKLRKSRRTAPLWNSKQF 726
Query: 533 ALGLESTYRNMWHRYCKG 550
+E Y+ MW Y G
Sbjct: 727 TREMEKAYQEMWTIYTSG 744
>gi|239815273|ref|YP_002944183.1| hypothetical protein Vapar_2288 [Variovorax paradoxus S110]
gi|239801850|gb|ACS18917.1| TPR repeat-containing protein [Variovorax paradoxus S110]
Length = 740
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 186/379 (49%), Gaps = 25/379 (6%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYS-AVVKADAKTIRFREKVMKKGGIWR 246
+GY S D+ H+ + I L HD ++V ++S +D T E++ + +
Sbjct: 367 LGYFSADFHAHATTLLIAELLEKHDPAKFEVFLFSFGPSTSDDMT----ERLSRSVDHFF 422
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
D+ + + A+ R +IDI ++L G+T + + + A + APVQV ++GYP + G I
Sbjct: 423 DVSEASDSAICALSRRLEIDIAIDLKGYTQSCRPRIFAGRAAPVQVNYLGYPASMGATFI 482
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTPS-----------PEAGPVCPTPALTN 355
DY + D++ PPE + E+++ LP C+ P A PA +
Sbjct: 483 DYIVGDAVVTPPEHASFYTEQIVTLPHCYQPNAPGLRLIAPMRMDRASARMAAGLPA--S 540
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS-VRHRFLSTLEQLGL 414
GF+ F FNN KITP V W RIL AVP+S L + + DS V R + G+
Sbjct: 541 GFV-FCCFNNTYKITPTVFATWMRILRAVPDSVLWL----YETDSRVGPRLQEEAVKNGI 595
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
E R+ P L +H+ + L D+ LDTFP TT ++L+ G+P +T G+ A
Sbjct: 596 EPGRLVFAPRQPLG-EHLCRHELADLFLDTFPCNAHTTGSDALWAGLPLLTCLGTTFASR 654
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
V SLL VGL ++ D Y A++LAS+ L R LR +P+ D +
Sbjct: 655 VAASLLHAVGLPEMVMPTLDAYATRAIELASEPDELLRQREHLRQARRDAPLFDIDRYRC 714
Query: 535 GLESTYRNMWHRYCKGDVP 553
G+E YR MW RY + + P
Sbjct: 715 GIEDAYRMMWERYMRCEPP 733
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 37/193 (19%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G A + +++ A Y++A NP + NL +K ++A++CY AL++ P+
Sbjct: 83 GNALHGLKRYEEAAQAYQVALTLNPDGHDVLTNLANAWKRLGRFERAMQCYDRALAMCPS 142
Query: 65 FSQSLNNLGVVYTVQGK------------------MDAAAEMI----------------E 90
+ N GV +G+ +DA + I
Sbjct: 143 SIDTRYNRGVALLEKGRHAEALDDFDAVLARSSDDLDALCQRIYALCGLQRHQEALAESN 202
Query: 91 KAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI-DPDSRNAGQNRLLAMNYINE 149
AIA +P+ A+A+ G + G+ A A+E+ + + P S G++ LA +
Sbjct: 203 HAIARHPSSADAWRAHGHVLLGMGNSLQAAQAFERVIDLGGPSSSARGEDHFLAARALVG 262
Query: 150 G--HDDKLFEAHR 160
G H++ R
Sbjct: 263 GSRHEEAFLHLER 275
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 56/131 (42%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
D A Y+ P + L ++ R+ D+A+ +A++I+P S + G
Sbjct: 24 LDQAEAGYQKILSRAPRHHPSLGMLAILGIQRNRPDEALHYADLAIAIEPRISNTHATRG 83
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ + AA+ + A+ NP + NL ++ G A+ Y++ L + P S
Sbjct: 84 NALHGLKRYEEAAQAYQVALTLNPDGHDVLTNLANAWKRLGRFERAMQCYDRALAMCPSS 143
Query: 134 RNAGQNRLLAM 144
+ NR +A+
Sbjct: 144 IDTRYNRGVAL 154
>gi|409991248|ref|ZP_11274526.1| hypothetical protein APPUASWS_09479 [Arthrospira platensis str.
Paraca]
gi|409937884|gb|EKN79270.1| hypothetical protein APPUASWS_09479 [Arthrospira platensis str.
Paraca]
Length = 744
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/532 (25%), Positives = 234/532 (43%), Gaps = 36/532 (6%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE----AYNN 105
+A++ QM L + P +N++ ++T G E ++A + T E +++
Sbjct: 215 QAIKLCQMGLQLAPRSRALINSVAAIFTDMGDYAQGIEYAQRAYSVVETIPEKLCQSFSI 274
Query: 106 LGVLYRDAGSISLAIDAYEQ-CLKID----PDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L L G D +EQ L ID +N G + + Y + + + R
Sbjct: 275 LKALLTAGGYWDKLWDFWEQHKLLIDQLIVEHPKNLGTSSMGVCLYTTSFYFPYIVDNPR 334
Query: 161 D-------------------WGKRFMRLYSQYTSWDNTKDPE-RPLVIGYVSPDYFTHSV 200
+ + + + ++TS P R L IGYVS + HSV
Sbjct: 335 ENITIRQQICQVCQSNVEIAFPELITKFRGRHTSLRQGVQPSPRKLKIGYVSSCFRRHSV 394
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
+ + Y D N+++ Y + I+ + I + Y + ++A +
Sbjct: 395 GWLARSLWKYGDRHNFEIYTYMTESRVFYDQIQ-EWYIANSDHIHK--YSSVKLELAEQI 451
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
D+IDILV+L T +N +MA +PAP+QVTW+G+ + + +PT+DY I D P
Sbjct: 452 YADQIDILVDLDSLTTSNMSAIMALKPAPIQVTWLGW-DASAVPTVDYFIADPYVLPENA 510
Query: 321 KQKHVEELIRLPECFLCYTPSPEAGPVCPTP--ALTNGFITFGSFNNLAKITPKVLQVWA 378
++ + E + RLP+ +L + P A+ + I + K P + ++
Sbjct: 511 QEYYQETIWRLPQTYLAVDGFEVSVPTITRADLAIPDDAIVYLGLQRGPKYNPHIAKLQL 570
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
IL VPNS +VK DS+ F Q G+ R+ + + +H +
Sbjct: 571 EILREVPNSYFLVKGFG-QQDSLNQFFFDIANQQGITRERIKFIAPVKWEEEHRANLLIA 629
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D+ LDT+PY G TTT E+L+MG+P VT G A +++ G+ IA ++EYV+
Sbjct: 630 DVVLDTYPYNGATTTMETLWMGIPLVTRVGEQFAARNSYTMMMNAGITEGIAWTDEEYVE 689
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
++L +D ++ LR +P+ +G+ F +E Y+ MW RY G
Sbjct: 690 WGVRLGTDERLRQDISWKLRKSRRTAPLWNGKQFTRDMEKAYQEMWQRYIDG 741
>gi|323452442|gb|EGB08316.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
Length = 1151
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 151/598 (25%), Positives = 258/598 (43%), Gaps = 54/598 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ E D A+ Y A +P A+A +N+G YKD LD A+ CY AL ++
Sbjct: 405 NLGLVLKERGTVDDALAHYREAIAVDPQFADAYSNMGNAYKDLGRLDDAIRCYGEALKLR 464
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + +NL Y G+ A +A+ P +++A++NL S
Sbjct: 465 PDFADACSNLAAAYKDGGRHAEAVACYRRALELKPDFSDAFSNLAHSLVFVCDWSTRAAD 524
Query: 123 YEQCLKIDPDSRNAGQN-----------------------RLLAMNYINE--------GH 151
+E+ +I D A + R +A Y + G
Sbjct: 525 FERLTRIVRDQLAAAKPAAGNVPSVQPFHTLVYPVSISDMRAIAERYADRAALQAAVLGL 584
Query: 152 DDKLFEAHR-DWGKRFMRLYSQYTSWDNTKDP-ERPLVIGYVSPDYFTHSVSYFIEAPLV 209
+ L + R + R +R + + P + L +GY S D H +++ +++
Sbjct: 585 PEPLCDRLRPEDALRLLRETPDGARYGDAPAPGDGRLRLGYCSSDLGNHPLAHLMQSVFG 644
Query: 210 YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILV 269
HD + V + A+ D +R K+ + + D+ + A +R ID+LV
Sbjct: 645 MHDRSKFHVTCF-ALSGHDGSP--WRRKIEAEVERFVDLSTASPRDCALAIRARAIDVLV 701
Query: 270 ELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELI 329
L G+T + + A +PAP+QV+++G+ T G + Y + D++ P + + + E++
Sbjct: 702 NLNGYTKGARNEIFALRPAPIQVSYMGFCGTLGADYVQYVVADAVVLPRDHARHYSEKVC 761
Query: 330 RLPECFLCYTPSPEAGPVCPTPAL---------TNGFITFGSFNNLAKITPKVLQVWARI 380
R+P + + A + AL F +FN + KI P +L VW RI
Sbjct: 762 RVPHSYFVNDHAQSASYIFDAAALPKRADYGVPERASFVFCNFNQIYKIDPGILDVWCRI 821
Query: 381 LCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMD 439
L V S L +++ P ++R + + G+ R+ + +H++ L D
Sbjct: 822 LTRVDGSILWLLRFPPTGEANIR----AEARKRGVSDDRIHFT-AVSAKDEHIKRGVLAD 876
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
+ LDT TT C+ L+ G P VT G A V SLL GL L+A + Y +L
Sbjct: 877 LFLDTPQCNAHTTGCDILWGGCPMVTCLGGKMATRVAASLLGAAGLADLVAPDLGGYEEL 936
Query: 500 ALQLASDVTALANLRM---SLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
A+ LA+D A +R + R S++P+ D + +E Y MW + G P+
Sbjct: 937 AVALATDKERYAAVRRRAEACRAGPSRAPLWDTLRWVRNVERGYGAMWATHEAGAPPA 994
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E + AI Y A P A A NNLG KD+ +++A++CY A+ +
Sbjct: 337 NLGNALREHGDLEEAIACYRRALLLRPDHAHAHNNLGNAMKDKGLVNEAIQCYATAVGLA 396
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NLG+V +G +D A +AIA +P +A+AY+N+G Y+D G + AI
Sbjct: 397 PRFAAAHSNLGLVLKERGTVDDALAHYREAIAVDPQFADAYSNMGNAYKDLGRLDDAIRC 456
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + LK+ PD +A N LA Y + G + +R
Sbjct: 457 YGEALKLRPDFADACSN--LAAAYKDGGRHAEAVACYR 492
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E K D AI Y A NP A A NL Y ++ +L++A+ +++AL I+
Sbjct: 269 NLGNVLKEQGKVDAAIAEYARAIELNPGFAVAHGNLASCYFEKGDLERAIRIFRVALDIE 328
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NNLG G ++ A +A+ P +A A+NNLG +D G ++ AI
Sbjct: 329 PNFPDACNNLGNALREHGDLEEAIACYRRALLLRPDHAHAHNNLGNAMKDKGLVNEAIQC 388
Query: 123 YEQCLKIDP 131
Y + + P
Sbjct: 389 YATAVGLAP 397
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + + AI Y A P A A +NLG++ K+R +D A+ Y+ A+++
Sbjct: 371 NLGNAMKDKGLVNEAIQCYATAVGLAPRFAAAHSNLGLVLKERGTVDDALAHYREAIAVD 430
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G Y G++D A +A+ P +A+A +NL Y+D G + A+
Sbjct: 431 PQFADAYSNMGNAYKDLGRLDDAIRCYGEALKLRPDFADACSNLAAAYKDGGRHAEAVAC 490
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ PD +A N
Sbjct: 491 YRRALELKPDFSDAFSN 507
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 8 YGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQ 67
Y E + D A +Y A P +A +NLG + K++ +D A+ Y A+ + P F+
Sbjct: 240 YKERGRLDDAAAYYREAIRRKPSAFDAHSNLGNVLKEQGKVDAAIAEYARAIELNPGFAV 299
Query: 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCL 127
+ NL Y +G ++ A + A+ P + +A NNLG R+ G + AI Y + L
Sbjct: 300 AHGNLASCYFEKGDLERAIRIFRVALDIEPNFPDACNNLGNALREHGDLEEAIACYRRAL 359
Query: 128 KIDPDSRNAGQNRLLAMN 145
+ PD +A N AM
Sbjct: 360 LLRPDHAHAHNNLGNAMK 377
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG + + D+A Y A P+ A A L IYK+R LD A Y+ A+ K
Sbjct: 201 HLGHLHRAAGRRDVAEHCYAEALACAPNLAAAWCALAAIYKERGRLDDAAAYYREAIRRK 260
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + +NLG V QGK+DAA +AI NP +A A+ NL Y + G + AI
Sbjct: 261 PSAFDAHSNLGNVLKEQGKVDAAIAEYARAIELNPGFAVAHGNLASCYFEKGDLERAIRI 320
Query: 123 YEQCLKIDPDSRNAGQN 139
+ L I+P+ +A N
Sbjct: 321 FRVALDIEPNFPDACNN 337
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A+ + + A+ YE A +P AE +LG +++ D A CY AL+
Sbjct: 167 NLASAHLHLGETREALETYEAALLVDPSLAETRCHLGHLHRAAGRRDVAEHCYAEALACA 226
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + + L +Y +G++D AA +AI P+ +A++NLG + ++ G + AI
Sbjct: 227 PNLAAAWCALAAIYKERGRLDDAAAYYREAIRRKPSAFDAHSNLGNVLKEQGKVDAAIAE 286
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEG 150
Y + ++++P A N LA Y +G
Sbjct: 287 YARAIELNPGFAVAHGN--LASCYFEKG 312
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P AE+ +NL K+ + A Y A+++KP F+ + NNL + G+ A E
Sbjct: 125 PGVAESYSNLANALKELGDPRGAKRLYLKAIALKPRFTDAYNNLASAHLHLGETREALET 184
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
E A+ +P+ AE +LG L+R AG +A Y + L P+
Sbjct: 185 YEAALLVDPSLAETRCHLGHLHRAAGRRDVAEHCYAEALACAPN 228
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E+ A Y A P +A NNL + +A+E Y+ AL +
Sbjct: 133 NLANALKELGDPRGAKRLYLKAIALKPRFTDAYNNLASAHLHLGETREALETYEAALLVD 192
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ +++ +LG ++ G+ D A +A+A P A A+ L +Y++ G + A
Sbjct: 193 PSLAETRCHLGHLHRAAGRRDVAEHCYAEALACAPNLAAAWCALAAIYKERGRLDDAAAY 252
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++ P + +A N
Sbjct: 253 YREAIRRKPSAFDAHSN 269
>gi|71083055|ref|YP_265774.1| O-linked N-acetylglucosamine transferase [Candidatus Pelagibacter
ubique HTCC1062]
gi|71062168|gb|AAZ21171.1| Predicted O-linked N-acetylglucosamine transferase [Candidatus
Pelagibacter ubique HTCC1062]
Length = 557
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 186/352 (52%), Gaps = 10/352 (2%)
Query: 189 GYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDI 248
G++S D+ TH VS+F++ L+ + +++ + S + K+ I K++ K W +I
Sbjct: 204 GFLSSDFKTHPVSFFLKGLLLNFNKDKFEISLISNLHKSHYDNITDELKLLTKN--WINI 261
Query: 249 YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDY 308
+ + + ++R ++DIL++L G N+ +++ + A +Q W+GY NTTG+ +DY
Sbjct: 262 NSLSDSEATNLLRSFELDILIDLCGFFRGNRFQVISNRAAKIQACWLGYNNTTGIKNMDY 321
Query: 309 RITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAK 368
I D E ++ + E+++ LP+ + TPS + P N T+ SFNN K
Sbjct: 322 LIADHNLIKKEEEKLYSEKVLFLPKIWNAMTPSN----ILPEIQKNNSIFTYASFNNFHK 377
Query: 369 ITPKVLQVWARILCAVPNSRLVVKC---KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI 425
I+ + VW++IL NS++++K + ++ L G+E ++ +
Sbjct: 378 ISDDTIDVWSKILNN-SNSQIILKNPMPSSIVGEELKLNLLKKFIARGVEKKKILFINRK 436
Query: 426 LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL 485
DH+ Y+ +D++LDTFPY G TTT +++ MGVP +TM G G S+ + +
Sbjct: 437 KDFQDHLGLYNNVDVALDTFPYPGVTTTFDAVLMGVPVLTMKGHNLNSRCGESININLQM 496
Query: 486 KHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
++ IA+N+D+Y AL L + L N +LR+ + KS + D ++F E
Sbjct: 497 QNFIAENKDDYFNKALSLQKEKNILQNFGKNLREKVLKSSLFDTKDFTKSFE 548
>gi|440755140|ref|ZP_20934342.1| TPR domain protein [Microcystis aeruginosa TAIHU98]
gi|440175346|gb|ELP54715.1| TPR domain protein [Microcystis aeruginosa TAIHU98]
Length = 388
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 182/376 (48%), Gaps = 10/376 (2%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+ D+ H S+ +++ HD N++++ YS ++ +R ++ +
Sbjct: 18 LKIGYLCHDFRNHPTSHLMQSVFGLHDRNNFEIIAYSYGPDDGSE---YRHRIANDCDRF 74
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
D+ + + A + D + ILV+L G+ + ++A +PAP+QV ++ YP T G
Sbjct: 75 YDVATLSITESAQRIFNDGVHILVDLMGYIDKARTQILALKPAPIQVNYLVYPGTMGADF 134
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLC--YTPSPEAGPVCPTP-ALTNGFITFGS 362
IDY I D++ PPE+ E+L+ LP+ + Y + PV + L F
Sbjct: 135 IDYIIGDAIVTPPESADDFTEKLVILPDSYQANDYQQIISSKPVTRSHYGLPESGFVFCC 194
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN+ KI P++ VW IL VP S L + + ++ R + G+E R+ +
Sbjct: 195 FNHTYKIEPQIFTVWMEILANVPGSVLWLFSRVAEAEANLRR---EAKARGIEGDRL-IF 250
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
+ +H+ + L D+ LDT Y TT ++L+ G+P +T G+ VG SLLT
Sbjct: 251 AHLEPKSEHLARHQLADLFLDTLYYNAHTTGSDALWAGLPIITCPGATFPSRVGASLLTA 310
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+GL LI KN +EY LA+ LA L ++ L P+ D +F LE YR
Sbjct: 311 IGLPELITKNLEEYKNLAINLAKSPDKLHKIKQKLAQNRLTYPLFDTLHFTRNLEKAYRT 370
Query: 543 MWHRYCKGDVPSLKRM 558
MW Y G P + R+
Sbjct: 371 MWDIYAAGKSPEMIRI 386
>gi|209527310|ref|ZP_03275819.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|209492236|gb|EDZ92582.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
Length = 742
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 183/378 (48%), Gaps = 25/378 (6%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIRFREKVMKK 241
+ L IGY+S + HSV + +HD +++ Y A + DA + E+ K
Sbjct: 377 KTLKIGYISYCFRRHSVGWISRWLFQHHDRDKFEIYAYMIGAENRQDALQNWYMEQATKS 436
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
YGI +VA + ED+IDILV+L T N +MA +PAPVQVTW+G+ + +
Sbjct: 437 YQ-----YGIVSTEVAEQISEDQIDILVDLDSLTLTNTCSVMALKPAPVQVTWLGW-DAS 490
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL-------- 353
+PT+DY I D P + + E + RLP+ ++ G P+L
Sbjct: 491 AIPTVDYFIADPYVLPENAQDYYSETIWRLPQTYVAV-----GGFQVGIPSLRRQDIHIP 545
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQL 412
N + F + K P++ Q+ +IL VPNS LV+K F +S+ FL EQ
Sbjct: 546 ENAIVYFTAQRG-PKYNPELAQLQMQILKQVPNSYLVIKG--FGEQESINRLFLDLAEQQ 602
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
+ + + + L H ++ D+ LD++PY G TTT E+L+MG+P VT G A
Sbjct: 603 EVSRDQFRFIGAVALEETHRANLAIADVVLDSYPYNGATTTLETLWMGIPLVTRVGEQFA 662
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
+++ G+ IA ++EYV+ ++L +D ++ LR +P+ + + F
Sbjct: 663 ARNSYTMMMNAGITEGIAWTDEEYVEWGVRLGTDERLRQDISWKLRKSRGTAPLWNSKQF 722
Query: 533 ALGLESTYRNMWHRYCKG 550
+E Y+ MW Y G
Sbjct: 723 TREMEKAYQEMWKIYTSG 740
>gi|409436081|ref|ZP_11263278.1| putative glycosyltransferase TPR domain protein (SPINDLY-related)
[Rhizobium mesoamericanum STM3625]
gi|408752217|emb|CCM74427.1| putative glycosyltransferase TPR domain protein (SPINDLY-related)
[Rhizobium mesoamericanum STM3625]
Length = 641
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 188/385 (48%), Gaps = 21/385 (5%)
Query: 184 RPLVIGYVSPDYFT-HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+ + IGY+S D++ H+ + L HD +++ ++ + K + + +
Sbjct: 254 KKIRIGYLSSDFWAGHATMKLLRRILELHDRDKFEITLF---CHTEEKYLEHEAGTVDRS 310
Query: 243 GIWRDI---YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
W D+ + +++ A +RE +IDILV+L GHT + ++ AP+Q TW+G+P
Sbjct: 311 R-WGDVCIVRAMTDEEAAKAIRERQIDILVDLKGHTFGGRSRILNYGGAPLQATWLGFPG 369
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA---LTNG 356
+ +DY I D PP ++ + E+L+R+P+C+ P+ P T A L G
Sbjct: 370 SVTDVDLDYAIGDRFVLPPSSEANYYEKLVRMPDCYQPNDPANRPKPRPTTRAQVGLPVG 429
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
F SFN KI +L VW IL PNS L + ++ L+ + + G+ES
Sbjct: 430 AFVFASFNANRKINAAILDVWCNILKRAPNSVLWLM---LSSPRTQNNLLNYMNKKGVES 486
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
RV P + +H+ + D+ +DTFP G TTT E L+ G+P +T+ G+ A V
Sbjct: 487 DRVIFCPRVPY-EEHIDRQQMADLGIDTFPVNGHTTTSEQLWGGLPVLTVKGTNFASRVS 545
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
SLL +GL L+A + Y +A++LA+ + + +RD P+ D + F L L
Sbjct: 546 ESLLNAIGLPELVASDIKVYEDMAVELANTPDRIVEYKRRIRDNAVIMPLFDAERFTLHL 605
Query: 537 ESTYRNMWHRYCKG------DVPSL 555
E Y M R G DVP+L
Sbjct: 606 EKAYEMMVERAKLGQEPDHIDVPAL 630
>gi|291566900|dbj|BAI89172.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 742
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 184/378 (48%), Gaps = 25/378 (6%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIRFREKVMKK 241
+PL IGY+S + HSV + +HD +++ Y A + DA + E+ K
Sbjct: 377 QPLKIGYISYCFRRHSVGWISRWLFQHHDRDKFEIYAYMIGAENRQDALQNWYAEQANKS 436
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
YGI +VA + ED+IDIL++L T N +MA +PAPVQVTW+G+ + +
Sbjct: 437 YQ-----YGIVSTEVAEQISEDQIDILIDLDSLTLTNTCAIMALKPAPVQVTWLGW-DAS 490
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL-------- 353
+PT+DY I D P + + E + RLP+ ++ G P+L
Sbjct: 491 AIPTVDYFIADPYVLPENAQDYYSETIWRLPQTYVAV-----GGFEVGIPSLRREDINIP 545
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD-SVRHRFLSTLEQL 412
N + F + K P++ Q+ +IL VPNS LV+K F + S+ F E+
Sbjct: 546 ENAIVYFTAQRG-PKYNPELAQLQMQILKQVPNSYLVIKG--FDKEQSIAGLFFELAEEQ 602
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
G+ S ++ L + H + D+ LD++PY G TTT E+L+MG+P VT G A
Sbjct: 603 GVSSEQLRLTGSVSTEQTHRANLLIADVVLDSYPYNGATTTLETLWMGIPLVTRVGEQFA 662
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
+++ G+ IA ++EYV+ ++L +D ++ LR +P+ + + F
Sbjct: 663 ARNSYTMMMNAGITEGIAWTDEEYVEWGVRLGTDERLRQDISWKLRKSRRTAPLWNSKQF 722
Query: 533 ALGLESTYRNMWHRYCKG 550
+E Y+ MW Y G
Sbjct: 723 TREMEKAYQEMWKIYTSG 740
>gi|334127514|ref|ZP_08501426.1| hypothetical protein HMPREF9081_1013 [Centipeda periodontii DSM
2778]
gi|333389468|gb|EGK60633.1| hypothetical protein HMPREF9081_1013 [Centipeda periodontii DSM
2778]
Length = 485
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 192/370 (51%), Gaps = 18/370 (4%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IG+++ ++ + S S F E L+ + Y V Y+ +AD T R +V +
Sbjct: 127 LRIGFIAENFLSSSSSMFYEG-LLRGLGEKYDVYAYALDDRADDFTESLRGEVN-----Y 180
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANN-KLGMMACQPAPVQVTWIGYPNTTGLP 304
+ + ++ A +R D+ID+L +L GHT L ++A +PAPVQ++ IG+ TTG+
Sbjct: 181 NVLSNLSIEEQAQHIRADEIDVLFDLGGHTDGGMTLMVLARRPAPVQLSGIGWFATTGVD 240
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP--EAGPVCPTPALTNGFITFGS 362
+D +TD + P ++ + E+L+RLP F +TP A V PA N +TFG
Sbjct: 241 FVDGFLTDDVLSPAGAEEFYSEQLLRLPHAF-HFTPDAAMRASAVAERPA--NAPVTFGV 297
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
F N KI + L+ W RIL +P ++L+++ L +E L L + R+ +
Sbjct: 298 FQNFMKINEESLKAWGRILKKLPKAQLILQDAAVDSPLRVTTILEMIEGLKLPAKRIFVR 357
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSV-HAHNVGVSLLT 481
D++ Y+ +DI+LDTFPYAG +T +LYMGVP +T+ G HA +G ++LT
Sbjct: 358 TG---KRDYLADYADIDIALDTFPYAGGASTATALYMGVPVITLRGETHHASRLGAAMLT 414
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
G IA++ Y +LALQ+A + + R +LR + S + DG + S
Sbjct: 415 AAGKAAWIAESAQAYERLALQMAEHLWEVRANRAALRAEVEASALMDGAEYLSAFTSEIE 474
Query: 542 NMWHRYCKGD 551
+W +GD
Sbjct: 475 RLWAE--RGD 482
>gi|422343097|ref|ZP_16424025.1| hypothetical protein HMPREF9432_00085 [Selenomonas noxia F0398]
gi|355378404|gb|EHG25584.1| hypothetical protein HMPREF9432_00085 [Selenomonas noxia F0398]
Length = 484
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 209/380 (55%), Gaps = 29/380 (7%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
TK L +G+++P + + S + F APL+ ++ V YS + D F E+
Sbjct: 119 RTKVHHERLRVGFLAPHFLSSSSALFY-APLLRGLTKSCDVYAYSLSDRTD----DFTEE 173
Query: 238 VMKKGGIWRDIYG---IDEKKVAAMVREDKIDILVELTGHTANN-KLGMMACQPAPVQVT 293
M+ G + ++ I+E+ A +R D++D+L++L GHT L ++A +PAPVQ++
Sbjct: 174 -MRVGSVHYNVLANLSIEEQ--AQAIRTDEVDVLIDLGGHTEGGMTLMILARRPAPVQLS 230
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPE--AGPVCPTP 351
IG+ TTG+ +D +TD + P +T + EE++ LP F + P + A PV P
Sbjct: 231 AIGWFATTGVSFVDGILTDEILTPEDTDDFYSEEVMCLPYAF-AFEPRADMRAAPVSARP 289
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH--RFLSTL 409
A + +TFG+F N KI +VL+VW +IL +P + L+++ D+V R + L
Sbjct: 290 A--DAPVTFGAFVNFMKINEEVLKVWGQILKKLPKAHLILQ------DTVESPLRVTTIL 341
Query: 410 EQLGLESLRVDLLPLILLN--HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
E L E L++ + + + +D++ +Y +DI LDTFPYAG + +LYMGVP VT+
Sbjct: 342 EML--EGLKLPMKRIYVRKGKNDYLGSYGDVDIMLDTFPYAGAASAATALYMGVPIVTLE 399
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G+ HA +G S+LT IA + Y ++A+ LA D+ A+ + R +LR + KSP+
Sbjct: 400 GTTHAGRLGASILTAARQTEWIAADTRAYERIAVGLAEDIAAVRSGRSALRTALEKSPLM 459
Query: 528 DGQNFALGLESTYRNMWHRY 547
D ++ + S + W +Y
Sbjct: 460 DVSSYTDNVWSAIESAWAKY 479
>gi|307152771|ref|YP_003888155.1| O-linked N-acetylglucosamine transferase [Cyanothece sp. PCC 7822]
gi|306982999|gb|ADN14880.1| O-linked N-acetylglucosamine transferase SPINDLY family-like
protein [Cyanothece sp. PCC 7822]
Length = 724
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 183/370 (49%), Gaps = 8/370 (2%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
+ L IGY+ + HSV + Y++ +N++ ++YS + D T+++ K
Sbjct: 360 QKLKIGYIGHTFRRHSVGWLCRWLFNYYNRENFEFIIYSLSKQEDNLTLQW----FKPNA 415
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
+ + +A ++ +DKIDILV+L T N +MA +PAPVQVTW+G + +GL
Sbjct: 416 KLICFSSPNPQAIAHIIEKDKIDILVDLDSLTHNITCQVMALKPAPVQVTWLGL-DGSGL 474
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFG 361
PTIDY I D PP+ + + E++ RLP +L + L +G +
Sbjct: 475 PTIDYFIADPYVLPPDAQNYYQEKIFRLPTTYLAVSGFEVGVSTLKRQQLDIPDGAFVYL 534
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
S K P +++ +IL AVP+S L++K + ++ F+S + + R+
Sbjct: 535 SVQTGLKRHPDTIRLQMKILKAVPDSYLLIKGAG-NFEKIQQLFVSIASEEDVSPNRLRF 593
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
L H ++ D+ LDT+PY G TTT E L+MG+P VT G A + +
Sbjct: 594 LSQAPTEEIHRANLAIADVVLDTYPYNGATTTLEVLWMGIPLVTRVGEQFAARNSYTFMI 653
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
GL IA ++EY+Q ++L +D + L++ +P+ + Q F L +E+ Y+
Sbjct: 654 NAGLTEGIAWTDEEYIQWGVKLGTDERLRQQISWKLKNGRKTAPLWNAQQFTLDMENAYQ 713
Query: 542 NMWHRYCKGD 551
MW Y + +
Sbjct: 714 QMWRTYLENN 723
>gi|422303123|ref|ZP_16390477.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389791934|emb|CCI12280.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 713
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 183/375 (48%), Gaps = 13/375 (3%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
KD + L IGY++ + HS+ + YHDY + V +Y + D T F + +
Sbjct: 348 KDTNKVLKIGYIAHTLYNHSIGLISRWLMKYHDYNEFHVSLYLVSQQEDYITENFFKNQV 407
Query: 240 KKGGIWRDIYG--IDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
Y ID + +A + ED IDILV+L T N +MA +PAPVQVTW+G+
Sbjct: 408 NA------CYNLPIDPQMIAEKISEDNIDILVDLDSITNNTTCQVMALKPAPVQVTWLGF 461
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--N 355
+ +G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 462 -DASGIPAIDYYLADNYVLPADAQEYYQEKIWRLPNSYICVDGVEVAYPSLRRDDLGIPE 520
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
I + + K P+ +++ ++L +VPNS L ++ SV+ F E+ G+
Sbjct: 521 DAINYLTVQTGVKRNPETIRLQLQVLKSVPNSYLSIQGLS-DAKSVKKLFFKVAEEEGIN 579
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ +LPL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 580 YERLKILPLYPTGI-YRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRN 638
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
+L+ G+ IA +++EY+ ++L D + L + SP+ + + F
Sbjct: 639 SYTLMVNAGISEGIAWSDEEYIDWGIKLGKDEQLRRKVIAKLDESRQTSPIWNARQFTKD 698
Query: 536 LESTYRNMWHRYCKG 550
+ES YR MW YC+
Sbjct: 699 VESAYRQMWQIYCES 713
>gi|409441295|ref|ZP_11268287.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Rhizobium
mesoamericanum STM3625]
gi|408747107|emb|CCM79485.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Rhizobium
mesoamericanum STM3625]
Length = 685
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 154/587 (26%), Positives = 250/587 (42%), Gaps = 67/587 (11%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG-------KMDAAAEMI 89
N V + +L ++ + L I+P F Q NLG G + A AEM
Sbjct: 71 NYSVTLRQLGDLPGSINALRACLKIEPRFGQGHINLGRALEDAGLAGQAIQQWQAFAEMT 130
Query: 90 EKAIAANPTYA-EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN--------- 139
+ + ++G + +AG + A Q +++ PD +GQ+
Sbjct: 131 GEITPERVGHRLMILQHIGRVLENAGLMEEAEKTLWQAMELRPDKIESGQHWTSLRQRQC 190
Query: 140 ---RLLAMNYINEGH--------------DDKLFEAHRDW-------GKRFMRLYSQYTS 175
L++ I++ DD +F+ + + G+ +R +++
Sbjct: 191 KWPTLVSSELISQRQLLDALSPLTLACYADDPVFQLAKAYRYCKSLVGRPDLRGFARLAP 250
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY---SAVVKADAKTI 232
+ +R L IGYVS D H+V + + HD ++ Y A DA
Sbjct: 251 RQKSNTAQR-LRIGYVSSDLRDHAVGFALSEVFETHDKSAVEIYAYYCGEATRAPDATQT 309
Query: 233 RFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
R +M WRDI I ++ A + D+IDILV++ G+T + + + A +PAPV V
Sbjct: 310 R----IMNAIDCWRDISTIGDEDAARQIIADEIDILVDVNGYTKHARTRIFAYRPAPVIV 365
Query: 293 TWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP- 351
+ GYP T G P Y I D PP+ + + E+++R+P C P + P P
Sbjct: 366 AFCGYPGTMGSPFHQYIIADEHIIPPDHEIYYSEKVLRIP----CNQPVDRKRQIAPRPQ 421
Query: 352 ----ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLS 407
L F FN + KIT + W IL A PNS L + + V R
Sbjct: 422 RAEVGLPEDAFIFACFNGMQKITAACFERWMAILSATPNSILWLLSG---GEDVDQRLRQ 478
Query: 408 TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
+ EQ G+ R+ P N H+ + D+ LDTFPY +T +++ MG+P +T
Sbjct: 479 SAEQHGVAPERLIFAPKA-PNPKHLARIGVADLFLDTFPYGAHSTAGDAVTMGLPVLTFP 537
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G+ A S++ G+ LI D+YV A+ ASD AL+ +R SL S +
Sbjct: 538 GNGFASRFCASIVAAAGVPELICDGPDDYVGKAVAFASDREALSAVRQSLERQREGSVLR 597
Query: 528 DGQNFALGLESTYRNMWHRYCKGDVPS--LKRMEMLQQ---QVVSEE 569
D LE Y M +G+ P+ L+ +++ + +++SEE
Sbjct: 598 DIPALVRRLEQLYWQMQGECERGETPTPDLRNLDVYYEVGAEIMSEE 644
>gi|384083989|ref|ZP_09995164.1| Tetratricopeptide TPR_4 [Acidithiobacillus thiooxidans ATCC 19377]
Length = 708
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 147/563 (26%), Positives = 248/563 (44%), Gaps = 50/563 (8%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P AEA G + +L A+ YQ+A +++P + NL + + + G
Sbjct: 147 YHRALTLRPIYAEANAGYGNALRTLGDLGGALPYYQLAATLQPQSAAFGLNLALAFHMLG 206
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP--------- 131
+D A E P EA NL Y AG+ AID +E+ + P
Sbjct: 207 HLDLAIPRYETLAEKYPDLLEARLNLAGCYALAGNKKAAIDVFEKLRTLAPGHPTMLDGL 266
Query: 132 --------DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDN----- 178
D R+ GQ M + G ++ R + ++ ++ +N
Sbjct: 267 YEARRQACDWRDLGQLENDCMRVLRAGLAEQRATGFRGFTVLYLPTSAEEIRENNRFICE 326
Query: 179 -----------TKDPERPLV-IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVK 226
P+RP + +GY++ D H ++ I HD +++++ +YS
Sbjct: 327 QISKGVQGHLYQPQPQRPRIRLGYMTADVKEHPTAHLILNLFELHDTEHFEIFLYSWA-- 384
Query: 227 ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
D K+ R ++ + + Y + +K +A + D ID+LV+L GHTA+N+LG++A +
Sbjct: 385 QDDKS-EHRRRIKASVEHFVECYHLPDKDIAERIAADGIDVLVDLMGHTADNRLGVLARR 443
Query: 287 PAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ--KHVEELIRLPECFLCYT----P 340
PA +Q+ ++GYP T G +DY I D + PE ++ + VE + R+P C+ + P
Sbjct: 444 PAALQLGYLGYPGTYG-GLVDYLIADPVV-MPEGREGVETVEAVARMPHCYQINSHRQIP 501
Query: 341 SPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS 400
E P L + F NN K+ P V +W R+L +P S L + P
Sbjct: 502 LGEK-PTRQEAGLPEQGLVFCCMNNSYKLDPFVFSIWCRLLEQIPGSHLWLLQGP---QE 557
Query: 401 VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG 460
+ G++S R+ P + H+ D+ LDT Y TT ++L+ G
Sbjct: 558 MVTNLREAASAQGIQSERLIFAPRV-SRQQHLTRLQCADMFLDTRFYNAHTTATDALWAG 616
Query: 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDL 520
VP +T+AG + V SL+ + + L+ + Y AL+LA + LA LR L
Sbjct: 617 VPVLTVAGETFSARVAASLVHALEMPELVQPDWAGYEAEALRLAQNPDRLAELRARLWQK 676
Query: 521 MSKSPVCDGQNFALGLESTYRNM 543
++P+ D Q + +E+ Y N+
Sbjct: 677 RDQAPLFDTQKWVRNVETLYENL 699
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+ +A + K D A Y P A+A + LG I R ++A++ + A+S++
Sbjct: 27 QVAIAQHKAGKLDTAEDLYRKIIAMEPGVADAQHLLGAILYQRGQHEEAMQYVEQAMSLR 86
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ S N G ++ G +D A I+ A+ P AEA+ N G+ + A A
Sbjct: 87 PDQSFYYNTRGRIHLALGNLDQAVLDIQHAVELEPQNAEAHFNFAETLMLKGNTAEAAQA 146
Query: 123 YEQCLKIDP 131
Y + L + P
Sbjct: 147 YHRALTLRP 155
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + + + A+ + E A P + N G I+ NLD+AV Q A+ ++P
Sbjct: 62 LGAILYQRGQHEEAMQYVEQAMSLRPDQSFYYNTRGRIHLALGNLDQAVLDIQHAVELEP 121
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++ N ++G AA+ +A+ P YAEA G R G + A+ Y
Sbjct: 122 QNAEAHFNFAETLMLKGNTAEAAQAYHRALTLRPIYAEANAGYGNALRTLGDLGGALPYY 181
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
+ + P S G N LA + + GH D
Sbjct: 182 QLAATLQPQSAAFGLNLALAFHML--GHLD 209
>gi|351730791|ref|ZP_08948482.1| tetratricopeptide tpr_1 repeat-containing protein [Acidovorax
radicis N35]
Length = 809
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 158/588 (26%), Positives = 248/588 (42%), Gaps = 48/588 (8%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G + ++ AI +E A N +A NLG+ + L AV +Q A + P
Sbjct: 230 GAILAQREQWTQAIAHFEAAIQGNEKLVQAHKNLGLAQRSLFQLSNAVTAFQKAAQLSPQ 289
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
+ L+ L + G+ A ++AI P + Y N L+ A+ Y
Sbjct: 290 DVEILSFLALSLLEAGRYAEALAAYDQAIRLAPERPDLYYNRANLHIRFNRHEDAVADYM 349
Query: 125 QCLKIDPDSRNA----GQNRLLAMNYINEGHD----DKLFEAHRDWGKRFM--------R 168
++ PD++ +RL ++ + D ++ A K F+
Sbjct: 350 AVYRLKPDAKYLLGYLASSRLKTGDWRHLADDMAQCEQSIRAGELGVKPFIALSLFDSPE 409
Query: 169 LYSQYTSWDNTKD-PERPLV-------------IGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
L+ Q +D PE ++ +GY S D+ H SY I HD +
Sbjct: 410 LHKQAAQASVQQDFPESTVLGTILARAGGGKIRVGYYSADFHGHPTSYLIAQLFEVHDRE 469
Query: 215 NYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGH 274
++ +S A T R +++ + D+ E +A + RE IDI ++L G
Sbjct: 470 RFEWFAFSFGPPA---TDAMRARLVAGFDHFIDVRERSEIDIARLSRELGIDIAIDLMGF 526
Query: 275 TANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPEC 334
T + G+ A + APVQ ++GYP TTG +DY I D + P + + E+L LP
Sbjct: 527 TTGCRFGIFAHRCAPVQAGYLGYPGTTGANYMDYVIADKVVVPAQAQIHFTEKLAYLPHS 586
Query: 335 FLCYTPSPEAGPVCPT------PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
+ T PA F FNN KI P+V W RIL AVP+S
Sbjct: 587 YQVNDSQRAISDRVFTREEARLPATGR---VFCCFNNNQKILPQVFDSWMRILQAVPDSV 643
Query: 389 L-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY 447
L ++ P S+R + G+ R+ + L+ H+ + L D+ LDT PY
Sbjct: 644 LWLLADNPAVEGSLRRE----AQARGVAPERLVFAQRLPLDQ-HLARHRLADLFLDTLPY 698
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
TT ++L+ G+P +T G A V SLL VGL L+ + EY LA+ LA D
Sbjct: 699 NAHTTASDALWAGLPVLTQLGESFAARVAASLLHAVGLPELVTHSAAEYEALAISLARDP 758
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSL 555
L L L+ ++SP+ + + FA +E+ Y M RY +G P +
Sbjct: 759 ARLKALHDKLQAEKAQSPLFNTRQFARDIEAAYVAMHGRYMQGLAPEV 806
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 68/129 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G A ++ + + A+ YE AF + +AC N+G+++ D D+A++C+ ++++
Sbjct: 160 NKGNALRQLDRLEEALKCYEQAFALDSDDVDACQNMGMLHADAGRQDEALKCFDRVIALR 219
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +++ N G + + + A E AI N +A+ NLG+ R +S A+ A
Sbjct: 220 PQHAEAHNGKGAILAQREQWTQAIAHFEAAIQGNEKLVQAHKNLGLAQRSLFQLSNAVTA 279
Query: 123 YEQCLKIDP 131
+++ ++ P
Sbjct: 280 FQKAAQLSP 288
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+A G + + D A+ +E A P AEA N G+ K+ AV Y A++++
Sbjct: 92 NRGLALGALKRHDEALAHFERAISLRPGFAEAYVNRGITLKELSRPLDAVASYDQAIALQ 151
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + + NN G +++ A + E+A A + +A N+G+L+ DAG A+
Sbjct: 152 PRLAAAFNNKGNALRQLDRLEEALKCYEQAFALDSDDVDACQNMGMLHADAGRQDEALKC 211
Query: 123 YEQCLKIDPDSRNA--GQNRLLA-----------MNYINEGHDDKLFEAHRDWG 163
+++ + + P A G+ +LA +G ++KL +AH++ G
Sbjct: 212 FDRVIALRPQHAEAHNGKGAILAQREQWTQAIAHFEAAIQG-NEKLVQAHKNLG 264
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+ E+ + A+ Y+ A P A A NN G + D L++A++CY+ A ++
Sbjct: 126 NRGITLKELSRPLDAVASYDQAIALQPRLAAAFNNKGNALRQLDRLEEALKCYEQAFALD 185
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ + N+G+++ G+ D A + ++ IA P +AEA+N G + + AI
Sbjct: 186 SDDVDACQNMGMLHADAGRQDEALKCFDRVIALRPQHAEAHNGKGAILAQREQWTQAIAH 245
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYI 147
+E ++ + A +N LA +
Sbjct: 246 FEAAIQGNEKLVQAHKNLGLAQRSL 270
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
+P A + GV+ +L AV+ ++ + P + N G+ + D A
Sbjct: 49 DPKNVGALHMQGVLAYQAGHLQMAVDLIGQSIKLVPEDAAPHVNRGLALGALKRHDEALA 108
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147
E+AI+ P +AEAY N G+ ++ A+ +Y+Q + + P A N+ A+ +
Sbjct: 109 HFERAISLRPGFAEAYVNRGITLKELSRPLDAVASYDQAIALQPRLAAAFNNKGNALRQL 168
Query: 148 NEGHDDKLFEAHRDWGKRF 166
D+L EA + + + F
Sbjct: 169 -----DRLEEALKCYEQAF 182
>gi|407772277|ref|ZP_11119579.1| hypothetical protein TH2_00220 [Thalassospira profundimaris WP0211]
gi|407284230|gb|EKF09746.1| hypothetical protein TH2_00220 [Thalassospira profundimaris WP0211]
Length = 680
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 149/565 (26%), Positives = 252/565 (44%), Gaps = 37/565 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+G + K+D+A+ ++ A + P A +++ I + D+A + MA+
Sbjct: 131 NIGKLFSTQNKWDLALQAFQNASYIEPQNAGVLSSIAGILVEMRRFDEAEKFCVMAIKYD 190
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN ++ NLG++ + K AA + EK P A ++ LY A I +
Sbjct: 191 PNLAEPYLNLGIILYRKKKRGAAKQAFEKVAQLRPNNMTALSDY--LYVRA-QICDWSEL 247
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
+ K+ P + N + ++++ DD + + R L + +
Sbjct: 248 APEFKKVKPIGKPG--NSVSPFSFLH--FDDDPYAQKKRSENRAQELAVREVVPSFPRPS 303
Query: 183 ERP--LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
RP L IGY S D+ H+ + HD +++ YS D +K+++
Sbjct: 304 SRPQKLKIGYFSADFHNHATLSLMMGLFGLHDKSRFEIHAYSYGGVTDGWRRGELQKLVE 363
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
K W D+ G ++++ R IDI ++L G+T + + A + AP+Q+ ++GYP T
Sbjct: 364 KN--W-DVRGASDREIVEHARNQGIDIAIDLKGYTQYGRPQLFAYRMAPIQINYVGYPGT 420
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT------ 354
G IDY I D P E K + E++I +P C Y P+ + G P T
Sbjct: 421 LGADYIDYLIADHTIIPGEYKNAYSEKIIYMPHC---YQPN-DGGREFPENTQTRAELGL 476
Query: 355 --NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL 412
+GF+ F SFN KI+P+ +W R+L V S L + + L+ ++
Sbjct: 477 PEDGFV-FCSFNANYKISPREFDIWMRLLKKVDGSVL------WLFEGSEDAMLNLRKEA 529
Query: 413 GLESLRVDLLPLI----LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
G + VD L+ L H+ + D+ LDTF TT ++L+ G+P VT+ G
Sbjct: 530 G--NRGVDPARLVFAGFLPEEQHLARHKHADLFLDTFNVNAHTTASDALWTGLPLVTLPG 587
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A V S+L L LIAK+E+EY +AL LA A ++ ++D + P+ D
Sbjct: 588 KQFAARVAASVLKAANLPELIAKSEEEYEAIALDLALHPEKTAAMKAKVKDNVKACPLFD 647
Query: 529 GQNFALGLESTYRNMWHRYCKGDVP 553
+++ LE Y ++ RY P
Sbjct: 648 TKSYTRDLERAYDAVYERYLSNQNP 672
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 44 DRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY 103
D+ K VE + + P +Q N LG Y A + + KAI + + A+
Sbjct: 70 DQGEFAKGVELARQLVEYAPESAQIWNLLGFGYAKSQNPVEAEKCLRKAIEIDKNFGMAW 129
Query: 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137
N+G L+ LA+ A++ I+P +NAG
Sbjct: 130 VNIGKLFSTQNKWDLALQAFQNASYIEP--QNAG 161
>gi|409991249|ref|ZP_11274527.1| hypothetical protein APPUASWS_09484 [Arthrospira platensis str.
Paraca]
gi|409937885|gb|EKN79271.1| hypothetical protein APPUASWS_09484 [Arthrospira platensis str.
Paraca]
Length = 742
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 186/378 (49%), Gaps = 25/378 (6%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIRFREKVMKK 241
+PL IGY+S + HSV + +HD +++ Y A + DA + E+ K
Sbjct: 377 QPLKIGYISYCFRRHSVGWISRWLFQHHDRDKFEIYAYMIGAENRQDALQNWYTEQANKS 436
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+R YG+ +VA + ED+IDIL++L T N +MA +PAPVQVTW+G+ + +
Sbjct: 437 ---YR--YGMVSTEVAEQISEDQIDILIDLDSLTLTNTCAIMALKPAPVQVTWLGW-DAS 490
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL-------- 353
+PT+DY I D P + + E + RLP+ ++ G P+L
Sbjct: 491 AIPTVDYFIADPYVLPENAQDYYSETIWRLPQTYVAV-----GGFEVGIPSLRREDINIP 545
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD-SVRHRFLSTLEQL 412
N + F + K P++ Q+ +IL VPNS LV+K F + S+ F E+
Sbjct: 546 ENAIVYFTAQRG-PKYNPELAQLQMQILKQVPNSYLVIKG--FDKEQSIAGLFFELAEEQ 602
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
G+ S ++ L + H + D+ LD++PY G TTT E+L+MG+P VT G A
Sbjct: 603 GVSSEQLRLTGSVSTEQTHRANLLIADVVLDSYPYNGATTTLETLWMGIPLVTRVGEQFA 662
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
+++ G+ IA ++EYV+ ++L +D ++ LR +P+ + + F
Sbjct: 663 ARNSYTMMMNAGITEGIAWTDEEYVEWGVRLGTDERLRQDISWKLRKSRRTAPLWNSKQF 722
Query: 533 ALGLESTYRNMWHRYCKG 550
+E Y+ MW Y G
Sbjct: 723 TREMEKAYQEMWKIYTSG 740
>gi|226941622|ref|YP_002796696.1| TPR repeat protein [Laribacter hongkongensis HLHK9]
gi|226716549|gb|ACO75687.1| TPR repeat protein [Laribacter hongkongensis HLHK9]
Length = 839
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 192/377 (50%), Gaps = 15/377 (3%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
++ + +GYVS D H+ +Y + HD + ++V ++ ++ + R+++M
Sbjct: 188 DKRVRVGYVSWDVQEHATAYLMAGLFEKHDARQFEVFLFGHGPAMNSPS-PMRKRLMDAV 246
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+ DI + ++ A++R +ID+LV+L GHT + +LG+ A +P+ +QV+++G+P +TG
Sbjct: 247 EHFVDISLLSDEDSVALIRRLRIDVLVDLKGHTLHGRLGIFAHRPSSIQVSYLGFPGSTG 306
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT------NG 356
+P +DY I D P ++ ++E++ LP CY P+ + + P+ N
Sbjct: 307 MPCMDYMIADHFLVPERSRDLYLEKIAYLPN---CYQPTDDKREIGLIPSRKEMGLPENA 363
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
F+ F SFN L K+TP++ VW R+L +V S L + + + + G+++
Sbjct: 364 FV-FCSFNTLVKLTPEMFDVWCRLLQSVSGSVLWLIATD---KKAQENIVREAMERGVDA 419
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R + + H+ +L D+ LD+FP TT +SL+ G+P +TMAG V
Sbjct: 420 SRF-VFASQVAQSQHLARLTLADLFLDSFPVVAHTTASDSLWAGLPILTMAGESFVSRVA 478
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
S+L +G+ LI + D+Y Q AL LA L+ +R + SP+ D + L
Sbjct: 479 GSILKTIGVDELIVYSYDQYFQKALFLAKHPEELSGIRRKIAANKKTSPLFDTARYTRNL 538
Query: 537 ESTYRNMWHRYCKGDVP 553
E+ Y M G+ P
Sbjct: 539 EAVYMKMIEAALAGNEP 555
>gi|119510218|ref|ZP_01629356.1| hypothetical protein N9414_10548 [Nodularia spumigena CCY9414]
gi|119465168|gb|EAW46067.1| hypothetical protein N9414_10548 [Nodularia spumigena CCY9414]
Length = 729
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 188/374 (50%), Gaps = 18/374 (4%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
ERPL IGY+S + +HSV + L YH+ Q + + +YS ++ ++ ++
Sbjct: 365 ERPLRIGYLSECFRSHSVGFLAWWLLKYHNRQKFDIYLYSL---RESSQDPLQQAYQREF 421
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+ A + +D+IDILV+L T+ ++A +PAP+QV+W+GY + TG
Sbjct: 422 ADHYHQESLSMLGTADKINQDEIDILVDLDSLTSYGSCCILAFKPAPIQVSWLGY-DATG 480
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT-------- 354
PT+DY I D+ P + + E++ RLP+ ++ G V TP ++
Sbjct: 481 FPTVDYFIADNYVLPESAQDYYTEKIWRLPQNYIGID-----GFVVGTPTISRESLDIPE 535
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
+ + F S L + P+ +++ +I+ VPNS ++K ++ E G+
Sbjct: 536 DAIVYFSSQTGLKR-NPQNIRLQMQIIKQVPNSYFLLKSHRTNHQDLKDFITPIAEAEGV 594
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
+ LP + + +H ++ D+ LDT+PY G TTT E+L+MG+P VT G A
Sbjct: 595 DLECFRFLPSVPTDTEHRANLAIADVVLDTYPYNGATTTLETLWMGIPLVTRVGEQFAAR 654
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
+++ VG+ +A++++EYV+ ++L D + LR SP+ +G+ FA
Sbjct: 655 NSYTMMMNVGVTEGLARSDEEYVEWGVRLGKDEKLRQQIAWKLRQSRQTSPLWNGKQFAR 714
Query: 535 GLESTYRNMWHRYC 548
+E Y+ MW +Y
Sbjct: 715 EMEKAYQQMWEKYV 728
>gi|291566901|dbj|BAI89173.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 744
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 233/532 (43%), Gaps = 36/532 (6%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE----AYNN 105
+A++ QM L + P +N++ ++T G E ++A + T E +++
Sbjct: 215 QAIKLCQMGLQLAPRSRALINSVAAIFTDMGDYAQGIEYAQRAYSVVETIPEKLCQSFSI 274
Query: 106 LGVLYRDAGSISLAIDAYEQ-CLKID----PDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L L G D +EQ L ID +N G + + Y + + + R
Sbjct: 275 LKALLTAGGYWDKLWDFWEQHKLLIDQLIVEHPKNLGTSSMGVCLYTTSFYFPYIVDNPR 334
Query: 161 D-------------------WGKRFMRLYSQYTSWDNTKDPE-RPLVIGYVSPDYFTHSV 200
+ + + + ++TS P R L IGYVS + HSV
Sbjct: 335 ENITIRQQICQVCQSNVEIAFPELITKFRGRHTSLRQGVQPSPRKLKIGYVSSCFRRHSV 394
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMV 260
+ + Y D N+++ Y + I+ + I + Y + ++A +
Sbjct: 395 GWLARSLWKYGDRHNFEIYTYMTESRVFYDQIQ-EWYIANSDHIHK--YSSVKLELAEQI 451
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
D+IDILV+L T +N +MA +PAP+QVTW+G+ + + +PT+DY I D P
Sbjct: 452 YADQIDILVDLDSLTTSNMSAIMALKPAPIQVTWLGW-DASAVPTVDYFIADPYVLPENA 510
Query: 321 KQKHVEELIRLPECFLCYTPSPEAGPVCPTP--ALTNGFITFGSFNNLAKITPKVLQVWA 378
++ + E + RLP+ +L + P A+ + I + K P + ++
Sbjct: 511 QEYYQETIWRLPQTYLAVDGFEVSVPTITRADLAIPDDAIVYLGLQRGPKYNPHIAKLQL 570
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
IL VPNS +VK DS+ F Q G+ R+ + + +H +
Sbjct: 571 EILREVPNSYFLVKGFG-QQDSLNQFFFDIANQQGITRERIKFIAPVKWEEEHRANLLIA 629
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D+ LDT+PY G TTT E+L+MG+P VT G A +++ G+ IA ++EYV+
Sbjct: 630 DVVLDTYPYNGATTTMETLWMGIPLVTRVGEQFAARNSYTMMMNAGITEGIAWTDEEYVE 689
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
++L +D ++ L +P+ +G+ F +E Y+ MW RY G
Sbjct: 690 WGVRLGTDERLRQDISWKLHKSRRTAPLWNGKQFTRDMEKAYQEMWQRYIDG 741
>gi|443321167|ref|ZP_21050230.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Gloeocapsa sp. PCC 73106]
gi|442789133|gb|ELR98803.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Gloeocapsa sp. PCC 73106]
Length = 726
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 174/370 (47%), Gaps = 10/370 (2%)
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKT-IRFREKVMK 240
P + L IGY++ HSV + YHD +++ +Y + T F K +
Sbjct: 359 PHQRLRIGYIAHTLRMHSVGWLSRWLFQYHDRDEFEIFIYLVNQSEEEFTKTWFTSKADR 418
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+RD K V +++D+IDILVEL T N +M +PAP+QVTW+G +
Sbjct: 419 LYCFYRD-----SKSVIRQIKDDEIDILVELDSVTMNITCHVMCFKPAPIQVTWLGL-DA 472
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC--PTPALTNGFI 358
+GLP IDY I D P + + E++ RLP+ +L P T + + I
Sbjct: 473 SGLPAIDYFIADPYVVPDDADTYYREKIWRLPQTYLGIDGFEVGIPDLRRDTLGIPSDAI 532
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
+ + N K P L + +I+ AVPNS + K + ++ F + G+ R
Sbjct: 533 IYLNIQNALKRHPHTLDLQMQIIGAVPNSYFLTKGSG-DLEIIKRVFTEAALRHGVSPDR 591
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ LP H ++ D+ LDT+PY G TTT E L+MG+P VT G A +
Sbjct: 592 LRFLPFTPDEETHRANLAIADVILDTYPYNGATTTLEVLWMGIPLVTRVGEQFAARNSYA 651
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
+ +VGL IA ++EYV+ ++L +D +R L SP+ + + F +E
Sbjct: 652 FMQQVGLNEGIAWTDEEYVEWGIKLGTDANLRQQIRWKLHQSRQTSPLWNARQFTRDMEE 711
Query: 539 TYRNMWHRYC 548
YR MW +Y
Sbjct: 712 AYRQMWAKYS 721
>gi|399066550|ref|ZP_10748490.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Novosphingobium sp. AP12]
gi|398027979|gb|EJL21504.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Novosphingobium sp. AP12]
Length = 741
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 158/591 (26%), Positives = 259/591 (43%), Gaps = 56/591 (9%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNL + + D A + E A +P +A NLG + + D+A+ C+ +A ++
Sbjct: 161 YNLAGLLEQAERLDEAAQWLETAIVIDPGHVDAHYNLGNLRARQGWRDEAIACFAVAATL 220
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
K + S + NN+G + D A +A+AA+P A+A N G G A+
Sbjct: 221 KADHSDAHNNMGAQLLAAQRADEALAAFGRALAADPANAQAMVNRGKALVLKGDRVAAVG 280
Query: 122 AYEQCLKIDPDSRNAGQNRLLAMNYINEGH-------------------------DDKLF 156
A+ L ++P +++A L ++ + H DD
Sbjct: 281 AFRAALALNPQNKSALLQALFEEAHLCDWHARGDYALTGGPEAAAVQPFASLPFVDDPAH 340
Query: 157 EAHRDWGKRFMRLYSQYTSWDNTKDP--ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
+ R R+Y + + P + + +GY S D+ H+ + + HD
Sbjct: 341 QYRRSLAC-AARMYPDAPASLPSPAPSTDGRIPVGYFSADFHDHATMHLMAGFFREHDRS 399
Query: 215 NYKVVVYSAVVKA--DAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
Y+V +YS + DA + R +V + +I G+ ++ V A+ R D +DI V+L
Sbjct: 400 RYEVRLYSYGPRREDDAARVALRGEV----DAFVEIGGMRDEDVVALARADGLDIAVDLK 455
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G+T + + + APVQV+W+GYP T G IDY I D + PP + E+++RL
Sbjct: 456 GYTLGTRTRLFGQRLAPVQVSWMGYPGTLGHAAIDYFIADHVTMPPGAEVFFTEKIVRLA 515
Query: 333 ECFLCYTPSPEAGPVCP-TPALTN------GFITFGSFNNLAKITPKVLQVWARILCAVP 385
C Y + + + P T T GF+ F SFN KI+P +W +L VP
Sbjct: 516 HC---YQANDDRRAIVPDTRGRTRWGLPDTGFV-FASFNQSYKISPAEWDIWMGLLREVP 571
Query: 386 NSRLVVKCKPFCCDS---VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
S L + D+ V+ E G+E R+ + + + +H+ D+ L
Sbjct: 572 GSVL------WLLDTGAQVQANLRREAEVRGVEPERL-VFSKPIAHAEHLGRLIHADLFL 624
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQ 502
DTF TT ++L+ G+P +T+AG A V SL+ GL L + +Y LAL
Sbjct: 625 DTFAVNAHTTASDALWAGLPVLTLAGRQFAARVAASLVHAAGLPELAVEAAADYAALALN 684
Query: 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
LA D +A LR L + P+ D ++ +E M HR + +P
Sbjct: 685 LARDPERMATLRTRLAAKRATCPLFDTADYTRRVEDALSEM-HRRAQSGLP 734
>gi|440681073|ref|YP_007155868.1| TPR repeat-containing protein [Anabaena cylindrica PCC 7122]
gi|428678192|gb|AFZ56958.1| TPR repeat-containing protein [Anabaena cylindrica PCC 7122]
Length = 737
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 251/546 (45%), Gaps = 23/546 (4%)
Query: 13 KFDMAIVFYELAFHFN-PH---CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQS 68
+FD+AI + ELA N P+ +E ++L + + N D+ ++ + ++ +
Sbjct: 207 RFDLAIKYAELALAINYPNPEVISEVLSHLATFHYELGNFDQGIDISKKICNLAEKTNDF 266
Query: 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA-IDAYEQCL 127
+N V +QG + + E A P + + L L ++ ++ I C
Sbjct: 267 IN--AYVMLLQGFLRSGGRWYE----ALPIIEKYESYLHQLIKEQPNLERTRIYRLLNCT 320
Query: 128 KIDPDSRNA-GQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPL 186
P R+ +NR L + ++ A + + YSQ + + K P++ L
Sbjct: 321 YYLPYIRDTPRENRFLHNQVLQVCQNNIQIYAQEQFNR-----YSQ-SHFQRIKTPKKQL 374
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S HSV + +H+ + +++ Y ++ ++ +K R
Sbjct: 375 KIGYLSHCLREHSVGWLARWLYQHHNREEFEIYTYFVTYRSHIHDF-LQDWYEQKSDHVR 433
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
+ G D ++A + +D+IDILV+L TA+ MA +PAP+QVTW+G+ + +G+PTI
Sbjct: 434 KL-GRDGIEIAEQIYQDEIDILVDLDSMTADISCEAMALKPAPIQVTWLGW-DGSGIPTI 491
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFGSFN 364
DY I D+ P ++ + E++ RLP +L P L + + + S
Sbjct: 492 DYYIADNYVLPEYAQEYYREQIWRLPNTYLAVDGFEIGVPTLTRKNLEIPDDAVIYFSAQ 551
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
K P +++ +IL VPNS ++K VR F E+ G+ R+ L
Sbjct: 552 AGYKRNPDNVRLQMKILKEVPNSYFLIKDIHKEVGVVRQFFEKIAEEEGVSKERLRFLNK 611
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
+ + H + D+ LDT+PY G TTT E+L++G+P VT G + S++ G
Sbjct: 612 VPSSAIHRANLQIADVVLDTYPYNGATTTMETLWVGIPLVTKVGEQFSARNSYSMMVNAG 671
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
+ IA +++EY++ ++L + N+ L + + +G+ F LE+ Y+ MW
Sbjct: 672 ITEGIAWSDEEYIEWGVKLGKETDFRKNIHWKLLKSRQTASLWNGKQFTCDLENAYKKMW 731
Query: 545 HRYCKG 550
+Y G
Sbjct: 732 QKYIDG 737
>gi|222147875|ref|YP_002548832.1| hypothetical protein Avi_1160 [Agrobacterium vitis S4]
gi|221734863|gb|ACM35826.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 630
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 198/389 (50%), Gaps = 27/389 (6%)
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY-SAVVKADAKTIRFREKVMK 240
P+ L I Y S D H + I L+ HD + +++ + V +A + E++
Sbjct: 236 PQGRLRIAYFSSDLRLHPMMTLIYDALLQHDRSRFDIILLCHSPVGCEAYQSTWPEQL-- 293
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+G + R + + + +R++++DILV+L GHTA +L ++ AP++VT++G+P
Sbjct: 294 RGEVVR-VRDLSSAAIIEWIRQNEVDILVDLNGHTARARLDVVDLCDAPIKVTYMGFPGA 352
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP---EAGPVCPTPALTNGF 357
+DY ITD + P +K + E+L RLPE ++ + S + + L +G
Sbjct: 353 VMGVDLDYAITDPIITPDSSKPYYQEKLCRLPETYMANSVSSRTWQQRASRESVGLPSGR 412
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC-KPFCCDSVRHRFLSTLEQLGLES 416
FGSFN KI + +++WA+IL VP + L + C + D++R F Q G+++
Sbjct: 413 FVFGSFNGSQKIDRQAIRIWAQILKRVPEAILSISCARVAVADNLRVAF----AQQGIDA 468
Query: 417 LRVDLLPLILLNH----DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
R LI ++ + + S D+ LDTF Y G TTT ++L+ GVP +T G A
Sbjct: 469 GR-----LIFFDNCPSAEFLARMSATDLVLDTFIYNGHTTTSDALWAGVPVLTKKGKAFA 523
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
V SLL VGL L+A++ D+++ A+ LA L +LR LR + +P+ D + F
Sbjct: 524 GRVSESLLKAVGLPELVAQDADDFIARAVDLAEHPDRLEDLRARLRTQILTAPLFDAERF 583
Query: 533 ALGLESTYRNMWHRYCKG------DVPSL 555
LE Y M R G DVP+L
Sbjct: 584 TRHLERGYEMMAERARAGLAPDHLDVPAL 612
>gi|300696849|ref|YP_003747510.1| conserved protein of unknown function with TPR repeat domain
[Ralstonia solanacearum CFBP2957]
gi|299073573|emb|CBJ53093.1| conserved protein of unknown function with TPR repeat domain
[Ralstonia solanacearum CFBP2957]
Length = 672
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 153/557 (27%), Positives = 250/557 (44%), Gaps = 22/557 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG Y ++ A+ Y A + N++G + D+A+ Q A+ +
Sbjct: 123 YNLGNLYSRSRQYQAALGQYREALKRAEGRPDLHNSMGCACSELGLTDEALHHLQRAVQL 182
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA-IAANPTYAEAYNNLGVLYRDAGSISLAI 120
P ++++ NLG++Y ++ AAA ++ A I +P+ A+A + ++ + A
Sbjct: 183 APRYAEAWLNLGLLYRDTRQLKAAAGALQHAAIPGDPSEAQALSEWAMVQMSLCDWTAAA 242
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+ L + R AG + + N D+ A + + L + T +
Sbjct: 243 RTEARLLGLLRAGRAAGVVPFVTLALPNCTASDQRAAAAQATRQAPPPLDTA-TDDPAER 301
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA-DAKTIRFREKVM 239
P R + +GY+S D H+ +Y + L + D ++ +YS + D R R
Sbjct: 302 SPGR-IRVGYLSADLHAHATAYLLAGVLEHRDTARFETFLYSYGPQTHDDMQNRLRAACE 360
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ DI + + + A + D++D+L++L G T + +L + A +PAP+ V W+GYP
Sbjct: 361 H----FVDIAPLSDGQAAERIAADRLDLLIDLKGFTKHARLDIGAMRPAPILVNWLGYPG 416
Query: 300 TTGLPTI-DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----AL 353
T G + DY I D + P + + E L +P C Y P+ + P P L
Sbjct: 417 TLGNRRLADYLIGDPVVTPVSQQAQFEETLALMPHC---YQPTDSRREILPPPNRAEVGL 473
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
+ F FN KIT Q W IL P S L + +P S R + G
Sbjct: 474 PADGLVFCCFNQAYKITEARAQTWFAILSRTPGSVLWL-LEPDA--SARTALQEEAGRHG 530
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ S R+ P + H+ L D++LDTFPY TT + L+ GVP +T AG A
Sbjct: 531 IASERLVFAPQVA-QRAHIARLQLADLALDTFPYTSHTTASDLLWAGVPLLTRAGDTMAS 589
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
V S+L GL L+ ED+YV A++LA D ALAN+R+ + +P+ D FA
Sbjct: 590 RVAASILQAAGLHDLVVTTEDDYVNAAVRLAGDAQALANVRLRAQ-AARNTPLFDTGTFA 648
Query: 534 LGLESTYRNMWHRYCKG 550
LE+ + + R G
Sbjct: 649 RDLETLFGRIVERGPHG 665
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G E + A Y A P +A NLG +Y A+ Y+ AL
Sbjct: 90 NRGNLLAESGYAEQAEHLYLKAIELAPDAPDARYNLGNLYSRSRQYQAALGQYREALKRA 149
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
N++G + G D A +++A+ P YAEA+ NLG+LYRD
Sbjct: 150 EGRPDLHNSMGCACSELGLTDEALHHLQRAVQLAPRYAEAWLNLGLLYRD 199
>gi|222147824|ref|YP_002548781.1| hypothetical protein Avi_1088 [Agrobacterium vitis S4]
gi|221734812|gb|ACM35775.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 566
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 190/382 (49%), Gaps = 27/382 (7%)
Query: 188 IGYVSPDYFT-HSVSYFIEAPLVYHDYQNYKVVVY----SAVVKADAKTIRFREKVMKKG 242
IGY+S D+F+ H+ ++ L HD +++++Y A+V++D + +
Sbjct: 193 IGYLSNDFFSSHATMILLQGVLERHDRSRFEIILYCYSNKALVESDNGS-------RARM 245
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
G+ + I + + + M++ D +DILV+L GHT + ++G++ AP+QV W+G+P +
Sbjct: 246 GMIKQIGDLSDAAASTMIQNDDLDILVDLKGHTKDARIGLVNSGLAPIQVAWLGFPGSGI 305
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFL----CYTPSPEAGPVCPTPALTNGFI 358
DY I D + P +K + E+ RLPE + P P A P + F+
Sbjct: 306 GIDCDYIIGDPIVTPQSSKPFYQEKFCRLPETYQPNDNINRPLPPAVPRAALGLPQDRFV 365
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
SFN++ K++P+ ++ W +I+ +P+S L + C+ D + + + GL + R
Sbjct: 366 -LASFNSIKKLSPQTVEAWLKIMADLPDSILWILCR---SDIAKDNLRTLFARHGLSAER 421
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ P + + H+ S D+ LD+FPY G TTT + L+ GVP + + G A V S
Sbjct: 422 LIFTPPLAYPY-HLARLSAADLVLDSFPYCGHTTTSDCLWAGVPVLALKGQNFASRVSES 480
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
LLT +G+ L+A D+Y+ A LA + L LR + +P+ D F LE
Sbjct: 481 LLTALGVPELVAATVDDYIAQAQDLAHNRNRLQELRDRIAANRHTTPLFDTDRFTRHLED 540
Query: 539 TYRNMWHRYCKG------DVPS 554
Y M R G DVP+
Sbjct: 541 AYWMMVERAKAGLEPDHMDVPA 562
>gi|443657012|ref|ZP_21131811.1| hypothetical protein C789_2351 [Microcystis aeruginosa DIANCHI905]
gi|159029888|emb|CAO90942.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333289|gb|ELS47856.1| hypothetical protein C789_2351 [Microcystis aeruginosa DIANCHI905]
Length = 716
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 184/374 (49%), Gaps = 11/374 (2%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
KD + L IGY++ + HS+ + YHDY + V +Y K D T F+ +V
Sbjct: 351 KDTNKVLKIGYIAHTLYNHSIGLISRWLMKYHDYNEFHVSLYLVSQKEDMITQNDFKNQV 410
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ I+ + +A + +D ID+LV+L T N +MA +PAP+QVTW+G+
Sbjct: 411 NACYHL-----PINPQMIAEKISQDNIDVLVDLDSITNNATCQVMALKPAPIQVTWLGF- 464
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NG 356
+ +G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 465 DASGIPAIDYYLADNYVLPADAQEYYQEKIWRLPNSYICVDGVEVAYPSLRRDDLGIPED 524
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I + + K P+++++ ++L AVPNS L ++ SV F E+ G+
Sbjct: 525 AINYLTVQTGVKRNPEIIRLQLQVLKAVPNSYLSIQGLS-DAKSVEKLFFKIAEEEGINY 583
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ +LPL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 584 ERLKILPL-YPTGIYRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRNS 642
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EY+ ++L D + L + SP+ + + F +
Sbjct: 643 YTLMVNAGISEGIAWSDEEYIDWGIKLGKDENLRRKVIAKLDESRKTSPIWNARQFTKDM 702
Query: 537 ESTYRNMWHRYCKG 550
ES YR MW YC+
Sbjct: 703 ESAYRQMWQIYCES 716
>gi|399040605|ref|ZP_10735943.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rhizobium sp. CF122]
gi|398061392|gb|EJL53188.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rhizobium sp. CF122]
Length = 641
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 184/381 (48%), Gaps = 21/381 (5%)
Query: 188 IGYVSPDYFT-HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D++ H+ + L HD +++ ++ + K + + + W
Sbjct: 258 IGYLSSDFWAGHATMKLLRRILELHDRDKFEITLF---CHTEEKYLEHEAGTVDRSQ-WG 313
Query: 247 DI---YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
D+ + +++ A +RE +IDILV+L GHT + ++ AP+Q TW+G+P +
Sbjct: 314 DVCIVRDMTDEEAAKAIRERQIDILVDLKGHTFGGRSRILNYGGAPLQATWLGFPGSVTD 373
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA---LTNGFITF 360
+DY I D P ++ + E+L+R+P+C+ P+ P T A L G F
Sbjct: 374 VDLDYAIGDRFVLPKTSEANYYEKLVRMPDCYQPNDPANRPKPRPTTRAKVGLPEGAFVF 433
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
SFN KI +L VW IL PNS L + + L+ + + GLES RV
Sbjct: 434 ASFNANRKINTAILDVWCNILKRAPNSVLWLM---LSSPRTQTNLLNYMNKRGLESDRVI 490
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
P + +H+ + D+ +DTFP G TTT E L+ G+P +T+ G+ A V SLL
Sbjct: 491 FCPRVSY-EEHIDRQQVADLGVDTFPVNGHTTTSEQLWGGLPVLTVKGTNFASRVSESLL 549
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+GL L+A + Y A++LA+ +A + +RD P+ D + F L LE Y
Sbjct: 550 NAIGLPELVASDIKAYEDKAVELANAPDRIAEYKRRIRDNAGIMPLFDAERFTLHLERAY 609
Query: 541 RNMWHRYCKG------DVPSL 555
M R G DVP+L
Sbjct: 610 EMMVERAKLGQEPDHIDVPAL 630
>gi|425443193|ref|ZP_18823419.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389715556|emb|CCI00089.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 569
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 186/374 (49%), Gaps = 13/374 (3%)
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+P++ L IGY+S +H V + + YH+ + + + +Y D T ++
Sbjct: 205 NPDKKLKIGYISQSLKSHPVGFLSRWTINYHNREQFDIHLYMVSQPVDEITQQWFSNPAD 264
Query: 241 KGGIWRDIYGIDEKKVAAM--VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
K IY +A ++ED IDILV+L T ++A +PAP+QV W+G+
Sbjct: 265 K------IYHATADSLATYRKIKEDNIDILVDLDSGTGAIVAPVIALKPAPIQVNWLGF- 317
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL--TNG 356
+ +GLP +DY + D P ++ + E++ RLP F+ A P L N
Sbjct: 318 DGSGLPAVDYLLADPYVLPENAQEYYQEKIWRLPNTFVAVDGFEIAVPTLRREDLGINND 377
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+ + S K P ++++ +IL +VPNS +++ +S+ F ++G+E+
Sbjct: 378 AVIYLSSQTAIKRNPAMIRLQMQILKSVPNSYFLIQGVA-DDNSLWDLFCQIAAEVGVET 436
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ +LPL + ++ D+ LDT+P+ G TTT E+L+MG+P V G + G
Sbjct: 437 NRIKMLPL-YQTETYRANLAIADVVLDTYPFNGGTTTLETLWMGIPLVVKVGQQWSSRNG 495
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EYVQ ++L D +R LR SP+ + + F L
Sbjct: 496 YTLMMNAGITEGIAWSDEEYVQWGIKLGLDKNVREEVRWKLRKSRHTSPLWNAKQFTRDL 555
Query: 537 ESTYRNMWHRYCKG 550
E+ YR MW+ YC+
Sbjct: 556 ETAYRQMWNIYCQS 569
>gi|443312171|ref|ZP_21041791.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechocystis sp. PCC 7509]
gi|442777849|gb|ELR88122.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechocystis sp. PCC 7509]
Length = 730
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 187/381 (49%), Gaps = 26/381 (6%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRF-RE 236
NTK+ RPL IGY++ + HSV + + YH+ +++K +Y ++ + + + R+
Sbjct: 356 NTKETTRPLKIGYITHAFVGHSVGWLGRWLIQYHNKEDFKTNLY--LIHQNLEEYEWLRD 413
Query: 237 KVMKKGGIWRDIYGIDE--KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTW 294
KV DIY D +++A ++ D+IDIL++L T + ++A +PAP+QVTW
Sbjct: 414 KV-------EDIYNFDSNYQEIAKQIKADEIDILIDLDSLTLDTTCKVLALKPAPIQVTW 466
Query: 295 IGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT 354
+G+ + +G+P IDY I D P + + E + RLP+ ++ G P L
Sbjct: 467 LGW-DASGVPAIDYFIADPYVLPENAQDYYSENIWRLPQTYVAVD-----GFEVDVPTLR 520
Query: 355 NGF-------ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLS 407
+ + S K P+ +++ +I+ VPNS +VK K SV+ F
Sbjct: 521 REHLEIPPDAVIYYSGQTGYKRNPETVRLQMQIIKQVPNSYFLVKGKADET-SVKQFFTQ 579
Query: 408 TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
E G++ R+ +P H + D+ LDT+PY G TTT E+L+MGVP VT
Sbjct: 580 VAEAEGVDPNRLKFIPRDESELVHRANLGVADVVLDTYPYNGATTTLETLWMGVPLVTRV 639
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G + + + VG+ IA ++EYV+ ++L + + LR SP+
Sbjct: 640 GEQFSARNSYTFMMNVGVTEGIAWTDEEYVEWGVRLGKEPELRQQVAWKLRQSRQTSPLW 699
Query: 528 DGQNFALGLESTYRNMWHRYC 548
+ + F +E Y+ MW Y
Sbjct: 700 NAKQFTCEMEKAYKQMWQNYI 720
>gi|119487761|ref|ZP_01621270.1| hypothetical protein L8106_29805 [Lyngbya sp. PCC 8106]
gi|119455594|gb|EAW36731.1| hypothetical protein L8106_29805 [Lyngbya sp. PCC 8106]
Length = 744
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 245/547 (44%), Gaps = 39/547 (7%)
Query: 16 MAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL--NNL- 72
+A+ F ELAF P + +Y+ +NL+K +E + + + + + N+L
Sbjct: 217 LAVEFAELAFQLEPENTTVLFLITTLYQKAENLEKGIELAKHCYAALEDLADKVYANHLI 276
Query: 73 ---------GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
G V V ++ ++E I NP+ + + +L AY
Sbjct: 277 LRGLMSAGGGYVAEVSSILERHETLVESLIEFNPSELTQEVTMRLFS------TLFFPAY 330
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYIN-EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
L+ +P N + ++ + N E + D + ++ ++ S + KDP
Sbjct: 331 ---LRDEPQVNNKLRQQVAQICQKNIENYADSAVKQYK----------QKFASRQSIKDP 377
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+PL IGY+S HSV + A ++H + K +Y+ ++ A + ++ + K
Sbjct: 378 NKPLRIGYLSHCLRNHSVGWL--ARWLFHHHNQEKFQIYAYLINAKGREDALQDWYVNKA 435
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+ + + +++ + ED+IDIL++L T + +MA +PAPVQVTW+G+ + +
Sbjct: 436 DTAHE-FPVGSREIPDKISEDEIDILIDLDSITLDVTCEIMAVKPAPVQVTWLGW-DASE 493
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITF 360
+ IDY I D P + + E++ RLP+ ++ P L + +
Sbjct: 494 VQNIDYYIADPYVLPENAQDYYSEKIWRLPQTYIAVDGFEVGVPTLRRDDLNIPGDAVIY 553
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
S K P+ ++ IL AVPNS ++K D V+ F+ + G+ R+
Sbjct: 554 LSSQTGYKYHPQTAKMQIHILKAVPNSYFLIKGFK-KQDIVKEFFIQLAKDEGVNPDRLI 612
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
L + + H ++ D+ LDTFPY G TTT E+L+M VP VT G A +++
Sbjct: 613 FLSGVPSSIIHRANLAIADVLLDTFPYNGATTTLETLWMEVPMVTRVGQQFASRNSYTMM 672
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
G+ IA ++EYV+ ++L +D + LR +P+ +G+ F +E Y
Sbjct: 673 VNAGINEGIAWTDEEYVEWGIRLGTDEALRQQVTWKLRKSKQTAPLWNGKQFTREMEKAY 732
Query: 541 RNMWHRY 547
MW Y
Sbjct: 733 EQMWQIY 739
>gi|434386709|ref|YP_007097320.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Chamaesiphon minutus PCC 6605]
gi|428017699|gb|AFY93793.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Chamaesiphon minutus PCC 6605]
Length = 735
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 180/364 (49%), Gaps = 7/364 (1%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY++ + HSV + + +HD ++++V +Y D F + + G
Sbjct: 362 LRIGYIASTFRQHSVGWLSRWLMHHHDRESFQVFIYCVNTDPDNS---FNHQWFRHKGDC 418
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+G D + + A +R D+IDIL+EL T + +M +PAP+QV+W+G+ + +GLP
Sbjct: 419 ISYFGYDYQDIVAQIRADEIDILIELDSITFDTTCMVMTEKPAPIQVSWLGW-DASGLPA 477
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFGSF 363
IDY I D P E ++ + E++ RLP+ +L P L + + + S
Sbjct: 478 IDYFIADPYVLPDEAQEYYQEKIWRLPQTYLAVDGFEIGTPDLRRQDLDIPDDAVIYFSG 537
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
+ K P ++ I+ +VPNS ++K + +++ F + ++G+ R+ +
Sbjct: 538 QSGYKRNPNCIRAQMEIVKSVPNSYFLIKGSS-DPEIIKNLFGNLAAEVGISFDRLKFID 596
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
+ H ++ DI LDTFPY G TTT E+L+MG+P VT G + + +
Sbjct: 597 RVEDEPTHRANLAIADIVLDTFPYNGATTTLETLWMGIPMVTQVGKQFSARNSYTFMLNA 656
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
G++ IA ++ EY++ ++L D +R LR +PV D Q F +E Y M
Sbjct: 657 GIEEGIAWSQQEYIEWGIKLGLDPKLRMEIREKLRAGRQTAPVWDAQQFTRDMEQAYCQM 716
Query: 544 WHRY 547
W +Y
Sbjct: 717 WAKY 720
>gi|315497291|ref|YP_004086095.1| hypothetical protein Astex_0244 [Asticcacaulis excentricus CB 48]
gi|315415303|gb|ADU11944.1| hypothetical protein Astex_0244 [Asticcacaulis excentricus CB 48]
Length = 675
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 243/589 (41%), Gaps = 65/589 (11%)
Query: 17 AIVFYELAFHFNPH-CAEAC-----NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLN 70
AI YE F H C E+ NLGV+ D D+A + + A++ P+F S
Sbjct: 42 AIALYE---DFISHSCGESLLYAVLFNLGVLLTDTGAFDRARDVFLQAIAFNPDFMPSYI 98
Query: 71 NLGVVYTVQGKMDAA-------AEMIEKAIAANPTY-AEAYNNLGVLYRDAGSISLAIDA 122
NLG V G+ D A + N ++ A N + A +
Sbjct: 99 NLGRVNERLGRADLAVGNWADLTGRLASVTGQNLSHKVMALNQTARVLEAAHQDEACESS 158
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNY-----------------INEGHDDKLFEAHRDWGKR 165
Q L++DP R A Q+ + A + +G A D
Sbjct: 159 LRQSLELDPTQREATQHLIAARQRQCAWPIVEPFERMSREGLLKGMSPLSMTAFVDDPLL 218
Query: 166 FMRLYSQYTSWDNTKDPERPLV---------------IGYVSPDYFTHSVSYFIEAPLVY 210
+ L Y D + PL IGY+S D+ H++ + +
Sbjct: 219 QLALNCHYNRLDVGRPEHGPLTRHFMARQPRRDGRLRIGYLSSDFREHAIGHLLFEVPGL 278
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
HD +V Y + A++ + + K + +I +D+ A + +D I IL++
Sbjct: 279 HDRTKVEVFAYYCGIPAESDPVH--QHYRAKFDHFTNISDLDDAAAAQRISDDGIQILID 336
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
+ G+T + +L ++A +PAPV V W+G+P + G P Y I D P + + + E + R
Sbjct: 337 VNGYTRDARLKLLAMRPAPVIVNWLGFPGSMGSPYHHYIIADEWIIPDDHELYYSETVQR 396
Query: 331 LPECFLCYTPS------PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAV 384
LP CY P+ E P L + F FN KIT + W +L V
Sbjct: 397 LP----CYQPNNRLRLVAEPPPTRAEAGLPDKAFVFCCFNGTHKITRRTFDRWLAVLDRV 452
Query: 385 PNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDT 444
S L + +S R + + G++ R+ + L N H+ Y L D+ LDT
Sbjct: 453 AGSVLWLLSG---SNSSHLRLKAYAQARGIDPSRL-IFAEKLANPAHLARYPLADLFLDT 508
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
PY TT ++L+MGVP +T++G A V SLL GL L+ +++V +A+ L
Sbjct: 509 SPYGAHTTCSDALWMGVPVLTLSGRSFASRVCGSLLRAAGLPELVTTRPEDFVDMAVSLG 568
Query: 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
D L +LR L + + + + + GLE+ + MW Y G +P
Sbjct: 569 RDSDRLISLRQRLTEERDRCTLFNMEGLVKGLETLFARMWGAYLDGQLP 617
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 31 CAEACNNLGVI--------YKDRDNLDKAVECYQMALSIKPNFS---QSLNNLGVVYTVQ 79
A + N L VI K R +L+ A+ Y+ +S S L NLGV+ T
Sbjct: 14 AAASTNKLSVIELINRSENLKIRGDLNGAIALYEDFISHSCGESLLYAVLFNLGVLLTDT 73
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
G D A ++ +AIA NP + +Y NLG + G LA+
Sbjct: 74 GAFDRARDVFLQAIAFNPDFMPSYINLGRVNERLGRADLAV 114
>gi|425468294|ref|ZP_18847324.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9701]
gi|389885054|emb|CCI34705.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9701]
Length = 716
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 183/374 (48%), Gaps = 11/374 (2%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
KD ++ L IGY++ + HS+ + YHDY + V +Y K D T F+ +V
Sbjct: 351 KDSKKVLKIGYIAHTLYNHSIGLIARWLMKYHDYNEFHVSLYLVSQKEDFITENCFKNQV 410
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ ID + +A + +D IDILV+L T +MA +PAP+QVTW+G+
Sbjct: 411 NACYNL-----PIDPQVIAEKISQDNIDILVDLDSITNKATCQVMALKPAPIQVTWLGF- 464
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NG 356
+ +G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 465 DASGIPAIDYYLADNYVLPADAQEYYREKIWRLPNSYICVDGVEVASPSLRRDDLGIPED 524
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I + + K P+ +++ ++L AVPNS L ++ SV F E+ G+
Sbjct: 525 AINYLTVQTGVKRNPETIRLQLQVLKAVPNSYLSIQGLS-DAKSVEKLFFKIAEEEGINY 583
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ +LPL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 584 ERLKILPLYPTGI-YRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRNS 642
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EY+ ++L D + L + SP+ + + F +
Sbjct: 643 YTLMVNAGISEGIAWSDEEYIDWGIKLGKDEQLRRKVIAKLDESRKNSPIWNARQFTKNV 702
Query: 537 ESTYRNMWHRYCKG 550
E+ YR MW YC+
Sbjct: 703 ENAYRQMWQIYCES 716
>gi|313895607|ref|ZP_07829163.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975733|gb|EFR41192.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 440
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 139/231 (60%), Gaps = 13/231 (5%)
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
+ YT + + R L IGY+SPD+ H+V+YF+ L + D + + V Y A + DA
Sbjct: 206 TSYTHENALRTEHRKLRIGYISPDFREHAVAYFLTPLLRHFDGEQFMVFCY-ATGRNDAV 264
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
T R R + + WRD+ + A ++ ED+IDILV+L+GH+ +N L +MA +PAP+
Sbjct: 265 TDRLRSRRV----TWRDLRSRSPRTAARLINEDRIDILVDLSGHSQDNALPIMAYRPAPI 320
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADP---PETKQKHVEELIRLPECFLCYTPSPEAGPV 347
Q++ IGY NTTG+ TIDY ++D + P + E+++R+P LCY P E P+
Sbjct: 321 QISGIGYTNTTGVDTIDYFLSDEICIPYGDTTAESGFTEQILRMPHSHLCYAPE-EIRPM 379
Query: 348 CPT----PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCK 394
T P NG++TFGSFNN AK+T + L +W IL +V +SRLV+K K
Sbjct: 380 PKTGFEAPVRRNGYVTFGSFNNFAKVTDETLLLWRGILESVHDSRLVIKGK 430
>gi|425436659|ref|ZP_18817093.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9432]
gi|389678582|emb|CCH92567.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9432]
Length = 716
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 184/374 (49%), Gaps = 11/374 (2%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
KD + L IGY++ + HS+ + YHDY + V +Y K D T F+ +V
Sbjct: 351 KDTNKVLKIGYIAHTLYNHSIGLISRWLMKYHDYNEFHVSLYLVSQKEDMITQNDFKNQV 410
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ I+ + +A + +D ID+LV+L T N +MA +PAP+QVTW+G+
Sbjct: 411 NACYHL-----PINPQMIAEKISQDNIDVLVDLDSITNNATCQVMALKPAPIQVTWLGF- 464
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NG 356
+ +G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 465 DASGIPAIDYYLADNYVLPADAQEYYQEKIWRLPNSYICVDGVEVAYPSLRRDDLGIPED 524
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I + + K P+++++ ++L AVPNS L ++ SV F E+ G+
Sbjct: 525 AINYLTVQTGVKRNPEIIRLQLQVLKAVPNSYLSIQGLS-DAKSVEKLFFKIAEEEGINY 583
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ +LPL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 584 ERLKILPLYPTGI-YRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRNS 642
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EY+ ++L D + L + SP+ + + F +
Sbjct: 643 YTLMVNAGISEGIAWSDEEYIDWGIKLGKDENLRRKVIAKLDESRKTSPIWNARQFTKNV 702
Query: 537 ESTYRNMWHRYCKG 550
E+ YR MW YC+
Sbjct: 703 ENAYRQMWQIYCES 716
>gi|384263551|ref|YP_005418740.1| Predicted O-linked N-acetylglucosamine transferase [Rhodospirillum
photometricum DSM 122]
gi|378404654|emb|CCG09770.1| Predicted O-linked N-acetylglucosamine transferase [Rhodospirillum
photometricum DSM 122]
Length = 682
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 147/577 (25%), Positives = 239/577 (41%), Gaps = 99/577 (17%)
Query: 50 KAVECYQMALSIKPNFSQS---LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
+A + Y++ L P+ + L NL + G + AA +++A+ +P + A N
Sbjct: 65 RAAQLYRLWLDSHPDAPERGPVLFNLSIALAASGDLGAAVASLDEALERDPAFHAARVNR 124
Query: 107 GVLYRDAGSISLAI----DAYEQCLKIDPDSRNAGQNRLLAMNYIN-------------- 148
G+ G A+ D E+ + P+ A + LA+ ++
Sbjct: 125 GIFLSRTGDSEGAMASWHDVLERLGALTPE---ALHLKTLALRHLAHSLERAQREDEAEP 181
Query: 149 --------EGHDDKL------------------------------------FEAHRDWGK 164
E HD ++ AH D
Sbjct: 182 VLRALLALESHDPEISQHWISTRQAQCCWPLLEPVETHTPATLRRRMPPLALAAHTDDPW 241
Query: 165 RFMRLYSQYTSWDN-----------TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
+ + YT W T D R + +GYVS D H+V + V HD
Sbjct: 242 LLLAAGAAYTPWRPEIAPLPCPARPTDDGTRRVRVGYVSADLRGHAVGSLVPEVFVGHDR 301
Query: 214 QNYKVVV-YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
+++ Y+ D +R ++ V W+++ G+D+ A + +D+LV+L
Sbjct: 302 TRFEIFAFYTGPAGLDGHRLRLQQSVEH----WQELTGLDDDSAARQIAAADLDLLVDLN 357
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
GHT + G++A +PAP+ + W+GYP TTG P Y I D PP ++ + E+++RLP
Sbjct: 358 GHTDGARPGIIARRPAPILINWLGYPGTTGSPFHHYIIADDWIIPPSHEKYYSEKVLRLP 417
Query: 333 ECFLCYTPSP---EAGPVCPTPA---LTNGFITFGSFNNLAKITPKVLQVWARILCAVPN 386
CY P+ E GPV P+ A L + + FN KIT + W +L AVP+
Sbjct: 418 ----CYQPNDLHREIGPV-PSRAEAGLPEEAVVYCCFNAAYKITRFTFERWISVLAAVPD 472
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
L + P + R R + + G++ R+ P + N H+ Y+L D+ LDT P
Sbjct: 473 GVLWL-LDP--GRTTRERLQAEAQARGIDPARLVFAPRV-PNPVHLARYALADLFLDTAP 528
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
Y TT ++L+ GVP +T +G A V SL+ GL L+ K+ ++Y A+ L D
Sbjct: 529 YGAHTTASDALWRGVPVLTWSGRAFASRVCGSLVRAAGLPDLVCKSPEDYTARAIMLGQD 588
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
A LR L + D LE+ Y +
Sbjct: 589 AEARQTLRARLAAAHETCVLFDMTALVRRLEALYEAL 625
>gi|333902093|ref|YP_004475966.1| hypothetical protein Psefu_3916 [Pseudomonas fulva 12-X]
gi|333117358|gb|AEF23872.1| Tetratricopeptide repeat-containing protein [Pseudomonas fulva
12-X]
Length = 611
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 251/558 (44%), Gaps = 66/558 (11%)
Query: 30 HCAEACN-----NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
HC+ + + NLGV + L A + Y+ A+ KP+F Q+ NLG V QG+ +
Sbjct: 58 HCSSSADYIVQFNLGVTLAQLEQLPAAEQAYRAAIVRKPDFVQAWFNLGAVIERQGRAEN 117
Query: 85 A----AEMIEKAIAA----NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS--- 133
A M++ + A + Y N++G L + + A L+ +PD
Sbjct: 118 ALVIWQSMLDHPLVAPDLNHDLYVMVLNSMGRLMEEVRKLQEAEQKLLASLQAEPDQPKV 177
Query: 134 ------------------RNAGQNR--------LLAMNYINEGHDDKLFEAHRDWGKRF- 166
AG +R LAM ++ +L A +R
Sbjct: 178 IQHWVHLRQKQCQWPVFVSTAGLSRGDLLKSTSPLAMLSASDDPGLQLATAMHFVSERVD 237
Query: 167 --MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAV 224
+ L + + +TK L I ++S D+ H+VS D + ++V +
Sbjct: 238 QRVALLAPPKGYAHTK-----LRIAFLSSDFCLHAVSLLTVELFELLDRERFEVYGF-CW 291
Query: 225 VKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMA 284
+ D +R R K + I G+D+ A ++R+ +IDILV+L G T+ + ++A
Sbjct: 292 SREDGSALRARVKAAMDHFM--PIGGLDDASAAQLIRQQEIDILVDLQGLTSGARPNILA 349
Query: 285 CQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEA 344
+PAP+Q+T++G+P TGLP +DY I D P + K + E+ + LP F C S
Sbjct: 350 YRPAPLQLTYLGFPGPTGLPCVDYVIADRYLIPEDEKPFYSEKPLYLP-VFQC---SDRQ 405
Query: 345 GPVCPTPA-----LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD 399
PV P P+ L F FNN K ++ W RIL AVP+S +
Sbjct: 406 RPVAPLPSRSECGLPEDRFVFCCFNNNYKFNEQMFSCWMRILAAVPDSLFWLLADNQWSQ 465
Query: 400 SVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM 459
+ ++ E+ G+ + R+ P + + ++ Y++ D+ LD +P+ G TT ++L+M
Sbjct: 466 A---NLIACAERHGVSADRLVFAPRVAPDL-YLARYTVADLFLDAYPFNGGTTANDALWM 521
Query: 460 GVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRD 519
G+P +T +G A + +LLT + L LI +N +Y Q A++LA D L NLR L+
Sbjct: 522 GLPVLTRSGRTFASRMAGALLTALELPELITENLADYEQRAIELARDPERLRNLRQRLQL 581
Query: 520 LMSKSPVCDGQNFALGLE 537
S + D F E
Sbjct: 582 GRETSLLFDMPRFVRSFE 599
>gi|425449355|ref|ZP_18829195.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 7941]
gi|389764012|emb|CCI09573.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 7941]
Length = 716
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 184/374 (49%), Gaps = 11/374 (2%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
KD + L IGY++ + HS+ + YHDY + V +Y K D T F+ +V
Sbjct: 351 KDTNKVLKIGYIAHTLYNHSIGLISRWLMKYHDYNEFHVSLYLVSQKEDMITQNYFKNQV 410
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ I+ + +A + +D ID+LV+L T N +MA +PAP+QVTW+G+
Sbjct: 411 NACYHL-----PINPQMIAEKISQDNIDVLVDLDSITNNATCQVMALKPAPIQVTWLGF- 464
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NG 356
+ +G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 465 DASGIPAIDYYLADNYVLPADAQEYYQEKIWRLPNSYICVDGVEVAYPSLRRDDLGIPED 524
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I + + K P+++++ ++L AVPNS L ++ SV F E+ G+
Sbjct: 525 AINYLTVQTGVKRNPEIIRLQLQVLKAVPNSYLSIQGLS-DAKSVEKLFFKIAEEEGINY 583
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ +LPL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 584 ERLKILPL-YPTGIYRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRNS 642
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EY+ ++L D + L + SP+ + + F +
Sbjct: 643 YTLMVNAGISEGIAWSDEEYIDWGIKLGKDEQLRRKVIAKLDESRKTSPIWNARQFTKNV 702
Query: 537 ESTYRNMWHRYCKG 550
E+ YR MW YC+
Sbjct: 703 ENAYRQMWQIYCES 716
>gi|425458863|ref|ZP_18838349.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9808]
gi|389823717|emb|CCI27874.1| Similar to tr|Q8YZB7|Q8YZB7 [Microcystis aeruginosa PCC 9808]
Length = 716
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 184/374 (49%), Gaps = 11/374 (2%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
KD + L IGY++ + HS+ + YHDY + V +Y K D T F+ +V
Sbjct: 351 KDTNKVLKIGYIAHTLYNHSIGLISRWLMKYHDYNEFHVSLYLVSQKEDMITQNDFKNQV 410
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ I+ + +A + +D IDILV+L T N +MA +PAP+QVTW+G+
Sbjct: 411 NACYHL-----PINPQMIAEKISQDNIDILVDLDSITNNATCEVMALKPAPIQVTWLGF- 464
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NG 356
+ +G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 465 DASGIPAIDYYLADNYVLPADAQEYYQEKIWRLPNSYICVDGVEVAYPSLRRDDLGIPED 524
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I + + K P+++++ ++L AVPNS L ++ SV F E+ G+
Sbjct: 525 AINYLTVQTGVKRNPEIIRLQLQVLKAVPNSYLSIQGLS-DAKSVEKLFFKIAEEEGINY 583
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ +LPL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 584 ERLKILPLYPTGI-YRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRNS 642
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EY+ ++L D + L + SP+ + + F +
Sbjct: 643 YTLMVNAGISEGIAWSDEEYIDWGIKLGKDENLRRKVIAKLDESRQTSPLWNARQFTKNV 702
Query: 537 ESTYRNMWHRYCKG 550
E+ YR MW YC+
Sbjct: 703 ENAYRQMWQIYCES 716
>gi|428210828|ref|YP_007083972.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Oscillatoria acuminata PCC 6304]
gi|427999209|gb|AFY80052.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Oscillatoria acuminata PCC 6304]
Length = 744
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 9/369 (2%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+S ++ HSV + YHD + ++V YS ++ + ++ + +
Sbjct: 380 LKIGYLSSCFYRHSVGWLSRWLFKYHDSKRFEVYGYS--LRRNDDNLQANIAYLTN---F 434
Query: 246 RDIYGIDEK-KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
RD+ G++ ++A ++ D +DILV+L T ++A +PAP+QVTW+G + +GLP
Sbjct: 435 RDLSGVNSPFEIAELIGRDHLDILVDLDSLTHRFISPILALKPAPIQVTWLG-SDASGLP 493
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFGS 362
+DY I D P + + +++RLPE ++ P L + + + S
Sbjct: 494 GVDYFIADPYVLPDSAQDYYRAKIVRLPEIYVAVDGFEVGVPTLRRDELGIPDDAVVYFS 553
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
K P+ +++ +I+ AVPNS ++K +SV+ F E+ G++ R+ L
Sbjct: 554 GQTGYKRNPQNVRLQLQIIQAVPNSYFLIKSSIADQESVKRFFEQMAEEEGVKRDRLRFL 613
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P + H ++ D+ LDT+PY G TTT E+L+MG+P VT G A +++
Sbjct: 614 PPVASEEIHRANLAIADVVLDTYPYNGATTTLETLWMGIPLVTRVGEQFAARNSYTMMMN 673
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
VG+ IA +++YV ++L +D + LR SP+ + + F +E +Y+
Sbjct: 674 VGVSEGIAWTDEDYVAWGIRLGTDTKLREEISWRLRQSQQTSPLWNAEKFTREMEISYQK 733
Query: 543 MWHRYCKGD 551
MW Y + +
Sbjct: 734 MWDNYLQNN 742
>gi|440225535|ref|YP_007332626.1| TPR repeat-containing protein [Rhizobium tropici CIAT 899]
gi|440037046|gb|AGB70080.1| TPR repeat-containing protein [Rhizobium tropici CIAT 899]
Length = 647
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 182/391 (46%), Gaps = 23/391 (5%)
Query: 175 SWDNTKDPERPLVIGYVSPDYFT-HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
+W N + +GY+S D++ H+ ++ L HD +++ ++ A K
Sbjct: 250 TWSNK------IRVGYLSSDFWPGHATMKLMQRTLELHDRDRFEITLFDHSDLASQKEQE 303
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
F + K G D+ G+ ++ A +R IDILV+L GHT ++ ++ APV V+
Sbjct: 304 FDDH---KWGTMIDVRGLSDQGAAEEIRARNIDILVDLKGHTKGSRAIILNHMAAPVHVS 360
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA- 352
W+G+P + +DY I D P +K E+ RLPEC+ P P T A
Sbjct: 361 WLGFPGSVVNIDLDYIIGDHYVLPDHSKSHFHEKFCRLPECYQPNDPLNRPKPRPTTRAQ 420
Query: 353 --LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLE 410
L F SFN KIT +++ VW IL NS L + C ++ + LE
Sbjct: 421 HKLPEDAFVFASFNGNRKITSQMVDVWCNILKRSKNSVLWLLCNGPRAEA---NLWARLE 477
Query: 411 QLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSV 470
G+ RV I DH+ L D+ LDTFP G TTT E L+ G+P +T+ G+
Sbjct: 478 ARGISRKRVVFTTRIRYE-DHIDRQQLADLGLDTFPVNGHTTTSEQLWGGLPVLTVKGTN 536
Query: 471 HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQ 530
A V SLL +GL L+A + Y +A+QLA +A + L S P+ D +
Sbjct: 537 FASRVSESLLNAIGLPELVAADIQTYEDMAVQLAEQPERIAEFKQILAANRSIKPLFDAE 596
Query: 531 NFALGLESTYRNMWHRYCKG------DVPSL 555
F LE+ + M R +G DVP+L
Sbjct: 597 RFTHHLETAFEMMAARAKQGLAPDHIDVPAL 627
>gi|209527309|ref|ZP_03275818.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|209492235|gb|EDZ92581.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
Length = 758
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 178/369 (48%), Gaps = 8/369 (2%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
+ L IGYVS + HSV + + Y D N+++ Y + I+ + +
Sbjct: 393 KKLKIGYVSSCFRRHSVGWLARSLWKYGDRHNFEIYTYMTEYRVFYDQIQ-EWYIAQSDH 451
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
I + Y + +A + D+IDILV++ T+N +MA +PAP+QVTW+G+ + + +
Sbjct: 452 IHK--YSSVKIDLAEQIYADQIDILVDMDSFTSNIT-AIMALKPAPIQVTWLGW-DASAV 507
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFG 361
PT+DY I D P ++ + E + RLP+ +L + P L + I +
Sbjct: 508 PTVDYFIADPYVLPENAQEYYQETIWRLPQTYLAVDGFEVSVPTITRADLEIPDDAIVYL 567
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
K P + ++ IL VPNS +VK DS F Q G+ + R+
Sbjct: 568 GLQKGPKYNPHIAKLQLEILREVPNSYFLVKGFG-QQDSFSKFFFDIANQQGITTDRIKF 626
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+P + L +H + D+ LDT+PY G TTT E+L+MG+P VT G A +++
Sbjct: 627 IPTVKLEENHRANLLIADVVLDTYPYNGATTTMETLWMGIPLVTRVGEQFAARNSYTMMM 686
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
G+ IA ++EYV+ ++L +D ++ L +P+ +G+ F +E Y+
Sbjct: 687 NAGITEGIAWTDEEYVEWGVRLGTDERLRQDISWKLHKSKRTAPLWNGKQFTRDMEKAYQ 746
Query: 542 NMWHRYCKG 550
MW RY G
Sbjct: 747 EMWQRYIDG 755
>gi|440754653|ref|ZP_20933855.1| hypothetical protein O53_3044 [Microcystis aeruginosa TAIHU98]
gi|440174859|gb|ELP54228.1| hypothetical protein O53_3044 [Microcystis aeruginosa TAIHU98]
Length = 705
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 183/373 (49%), Gaps = 11/373 (2%)
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKVM 239
D + L IGY++ + HS+ + YHDY + V +Y K D T F+ +V
Sbjct: 341 DTNKVLKIGYIAHTLYNHSIGLISRWLMKYHDYNEFHVSLYLVSQKEDMITQNYFKNQVN 400
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ I+ + +A + +D ID+LV+L T N +MA +PAP+QVTW+G+ +
Sbjct: 401 ACYHL-----PINPQMIAEKISQDNIDVLVDLDSITNNATCQVMALKPAPIQVTWLGF-D 454
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGF 357
+G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 455 ASGIPAIDYYLADNYVLPADAQEYYQEKIWRLPNSYICVDGVEVAYPSLRRDDLGIPGDA 514
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + + K P+++++ ++L AVPNS L ++ SV F E+ G+
Sbjct: 515 INYLTVQTGVKRNPEIIRLQLQVLKAVPNSYLSIQGLS-DAKSVEKLFFKIAEEEGINYE 573
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ +LPL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 574 RLKILPLYPTGI-YRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRNSY 632
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+L+ G+ IA +++EY+ ++L D + L + SP+ + + F +E
Sbjct: 633 TLMVNAGISEGIAWSDEEYIDWGIKLGKDEQLRRKVIAKLDESRKTSPIWNARQFTKDME 692
Query: 538 STYRNMWHRYCKG 550
S YR MW YC+
Sbjct: 693 SAYRQMWQIYCES 705
>gi|166363521|ref|YP_001655794.1| hypothetical protein MAE_07800 [Microcystis aeruginosa NIES-843]
gi|166085894|dbj|BAG00602.1| hypothetical protein MAE_07800 [Microcystis aeruginosa NIES-843]
Length = 713
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 181/375 (48%), Gaps = 13/375 (3%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
KD + L IGY++ + HS+ + YHDY + V +Y + D T F + +
Sbjct: 348 KDTNKVLKIGYIAHTLYNHSIGLISRWLMKYHDYNEFHVSLYLVSQQEDYITENFFKNQV 407
Query: 240 KKGGIWRDIYG--IDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
Y ID + +A + ED IDILV+L T N +MA +PAPVQVTW+G+
Sbjct: 408 NA------CYNLPIDPQMIAEKISEDNIDILVDLDSITNNTTCQVMALKPAPVQVTWLGF 461
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--N 355
+ +G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 462 -DASGIPAIDYYLADNYVLPADAQEYYREKIWRLPNSYICVDGVEVAYPSLRRDDLGIPE 520
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
I + + K P+ +++ ++L AVP+S L ++ SV F E+ G+
Sbjct: 521 DAINYLTVQTGVKRNPETIRLQLQVLKAVPHSYLSIQGLS-DAKSVEKLFFKVAEEEGIN 579
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ + PL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 580 YERLKIFPLYPTGI-YRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRN 638
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
+L+ G+ IA +++EY+ ++L D + L + SP+ + + F
Sbjct: 639 SYTLMVNAGISEGIAWSDEEYIDWGIKLGKDENLRRKVIAKLDESRQTSPIWNARQFTKD 698
Query: 536 LESTYRNMWHRYCKG 550
+E+ YR MW YC+
Sbjct: 699 MENAYRQMWQIYCES 713
>gi|418939709|ref|ZP_13493098.1| hypothetical protein PDO_2859 [Rhizobium sp. PDO1-076]
gi|375053594|gb|EHS49984.1| hypothetical protein PDO_2859 [Rhizobium sp. PDO1-076]
Length = 681
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 152/575 (26%), Positives = 241/575 (41%), Gaps = 61/575 (10%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA- 86
NP A N V + ++ ++ L I+P F + NLG Y G ++A A
Sbjct: 62 NPLLHLAYFNYSVTLRQLGDIPGSINALSACLKIEPRFGHANINLGRAYEDAG-LNAQAI 120
Query: 87 ----EMIEKAIAANPTYAE----AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138
IE P ++G + AG A A Q +++ PD AGQ
Sbjct: 121 QQWRSFIEATAELTPERMSHRLMTLQHIGRVMEGAGLQEEAETALWQAIEMRPDKPEAGQ 180
Query: 139 NRLL------------------------AMNYINEG--HDDKLFEAHRDW-------GKR 165
+ L AM+ + G DD LF+ + + G+
Sbjct: 181 HWLSLRQHQCKWPIVIPSEHVTKRQLLDAMSPLPLGCYADDPLFQLAKAYRYLKTLVGRP 240
Query: 166 FMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVV 225
+ ++ T +R L IGYVS D H+V + + L HD + ++ Y
Sbjct: 241 DLTGFTPKQVKQKTGSGQR-LRIGYVSSDLRDHAVGFALSEVLELHDKSSVEIFAYYC-- 297
Query: 226 KADAKTIRFREKVMKKG-GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMA 284
+A+T ++ MKK WRDI ID+ + A ++ D+IDIL+++ G T + + + A
Sbjct: 298 -GEARTNDGTQERMKKVVDTWRDISTIDDAQAARLIASDEIDILLDVNGFTKHARTRIFA 356
Query: 285 CQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEA 344
+PAPV + GYP + P Y I D PPE + + E+++R+P C P
Sbjct: 357 YRPAPVIAAFCGYPGSMASPFHQYLIADDYIVPPENELYYTEKVLRIP----CNQPVDRK 412
Query: 345 GPVCPTPALTNGFI-----TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD 399
+ P T + F FN + KIT W +IL A P S L + D
Sbjct: 413 RQIAARPTRTEAGLPEDAFVFACFNGMQKITANGFARWMKILAATPGSVLWLLTG---SD 469
Query: 400 SVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM 459
+V R + G+ + R+ P N H+ + D+ LDTFPY +T +++ M
Sbjct: 470 AVNQRLRQSATVCGVAADRIIFAPKA-PNAQHLARIGVADLFLDTFPYGAHSTASDAITM 528
Query: 460 GVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRD 519
G+P +T+ G A S+++ G+ LI D+YV A+ A D +LA +R SL+
Sbjct: 529 GLPVLTLPGKSFASRFCASIVSAAGIPELICSTPDDYVNKAVAYARDPASLAAVRASLQR 588
Query: 520 LMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
S + D LE M +G+ P+
Sbjct: 589 QRETSALRDMPAMVRRLEELCWQMQGERERGETPT 623
>gi|428207291|ref|YP_007091644.1| hypothetical protein Chro_2283 [Chroococcidiopsis thermalis PCC
7203]
gi|428009212|gb|AFY87775.1| hypothetical protein Chro_2283 [Chroococcidiopsis thermalis PCC
7203]
Length = 725
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 179/378 (47%), Gaps = 12/378 (3%)
Query: 175 SWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRF 234
SW N + + L IGYV+ +HSV + Y+D + ++ +Y + ++ F
Sbjct: 355 SWTNDRITTKKLKIGYVAHTLRSHSVGWLSRWIFQYYDREAFQTNLY-LLYQSPEDHKWF 413
Query: 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTW 294
RE+V YG + + + V+ D+IDILV+L T + +MA +PAPVQVTW
Sbjct: 414 REQVDCVRT-----YGAEPQAIVTQVKRDEIDILVDLDSLTLDTTCQVMALKPAPVQVTW 468
Query: 295 IGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL- 353
+G+ + + LP IDY I D P + + E + RLP ++ P L
Sbjct: 469 LGW-DASALPAIDYYIADPYVLPENAQDYYSETIWRLPHTYVAVDGFEVGTPTLRREHLE 527
Query: 354 --TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
+N + S K P +++ +IL VPNS +VK K +++R F E
Sbjct: 528 IPSNAVVYLSSQVGF-KRHPDTVRLQMQILSQVPNSYFLVKGKA-DENTIREFFNKIAED 585
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
G+ R+ L H + D+ LDT+PY G TTT E+L+MG+P VT G
Sbjct: 586 EGVNPDRLRFLSRDPSEFVHRANLGIADVVLDTYPYNGATTTLETLWMGIPLVTKVGQQF 645
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A + + VG+ IA ++EYV+ ++L +D + LR SP+ + +
Sbjct: 646 ASRNSYTFMMNVGVTEGIAWTDEEYVEWGVKLGTDSALRQQVAWKLRQSRQTSPLWNAKQ 705
Query: 532 FALGLESTYRNMWHRYCK 549
F +E Y+ MW RY +
Sbjct: 706 FTQEMEKAYKQMWQRYVE 723
>gi|259419160|ref|ZP_05743077.1| TPR repeat-containing protein [Silicibacter sp. TrichCH4B]
gi|259345382|gb|EEW57236.1| TPR repeat-containing protein [Silicibacter sp. TrichCH4B]
Length = 616
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 144/565 (25%), Positives = 233/565 (41%), Gaps = 77/565 (13%)
Query: 24 AFHFNPHCAEACNNLG-VIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKM 82
A P A LG V+ KD L A+ C A+ ++P F +G + K
Sbjct: 86 AISLEPKDASMHALLGEVLMKDSARLMDALSCLMQAVKLEPTFGGHYALIGTLLMRLQKF 145
Query: 83 DAAAEMIEKAIAANP--------------------------TYAEAYNNLGVLYRDAGSI 116
+ A + E A+ +P TY + +NN VL +
Sbjct: 146 EEAIDYFEIAVKFDPKNYIALSRMMHIKAHRARWDGFEKIPTYLKQFNNTRVLSDPFAFL 205
Query: 117 SLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSW 176
SL D Q R+ Q R N + ++ R GK+
Sbjct: 206 SLCDDGEFQ------KQRSISQVRAKLTNPVKA----PIYTGGRPAGKK----------- 244
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVK-ADAKTIRFR 235
L IGY S DY+ H+ + + L HD +++ +Y K D + R R
Sbjct: 245 ---------LRIGYFSNDYYNHATMHLMGGLLENHDRDRFELYLYDYGSKMRDHEHNRAR 295
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
+ ++ DI + ++ + D +DI V+L G T +L M + APVQV ++
Sbjct: 296 QS----ADVFHDIRHMTTAQIVDLATRDGLDIAVDLKGFTEGGRLDMFNSRVAPVQVAYL 351
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC------P 349
GYP T+GL ++DY + D + P ++ + E ++ +P C Y P+ E+ +
Sbjct: 352 GYPGTSGLKSMDYMVADRVTIPSHLRKHYTENILYMPNC---YQPNDESRYIAQMDDSRE 408
Query: 350 TPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
+ L F +FNN K+TP+ +W +L VP+S L + R
Sbjct: 409 SHDLPEESFVFSTFNNPYKVTPREFDIWMNLLKEVPDSVLWYYV---SNADIIDRLRKEA 465
Query: 410 EQLGLESLRVDLLPLILLNHD-HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
E G++ R+ +P + + H+ D+ LDTF TT ++L+ G+P VT G
Sbjct: 466 EARGVDGARI--IPTGRMQPEYHLARLKHADLFLDTFNVNAHTTASDALWAGLPLVTKTG 523
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A V S+LT GL+ L+ E +Y +AL++A D LA++RM L + S + D
Sbjct: 524 EQFAARVAGSILTAAGLEDLVTTTEKKYHDVALRIAQDPDYLADIRMRLAASHTNSALFD 583
Query: 529 GQNFALGLESTYRNMWHRYCKGDVP 553
Q + E + Y G+ P
Sbjct: 584 TQGYTRDFERLMERAFQNYLDGNAP 608
>gi|452963366|gb|EME68439.1| O-linked N-acetylglucosamine transferase [Magnetospirillum sp.
SO-1]
Length = 690
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 153/586 (26%), Positives = 242/586 (41%), Gaps = 63/586 (10%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
NP NLGV+ ++ + AVE ++ AL+ +P+F + NLG Y G+ A
Sbjct: 52 NPLAYAIQYNLGVLLGKFNDQEGAVEAFKAALAQRPDFFPAHINLGSTYERLGRTPDAVT 111
Query: 88 MIEKAIAANPTYA--------EAYNNLGVLYRDAGSISLAIDAYEQCLKI--DPDSRN-- 135
+ P A +G + DA QC+++ D+
Sbjct: 112 QWLGMVGQLPGVTGDTVNYKVSALKQIGRVLEHTSLEESGEDALRQCIELVQPADAMQHW 171
Query: 136 ----------------AGQNR---LLAMN-----------YINEGHDDKLFEAHRDWGKR 165
AG R L AM+ ++ ++ ++ K
Sbjct: 172 IAIRQKLCKWPVLTGVAGPTRRQLLTAMSPHCLVFHTDDPLLHLARGNRYYKVKVGRPKV 231
Query: 166 FMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVV 225
F L S + + + P+R + IGY+S + H+ Y HD ++V YS
Sbjct: 232 FFDLDSHRAALE--RRPKRRIRIGYLSSYFREHAHGYLTAEMYKLHDRSRFEVYAYSCSR 289
Query: 226 KADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMAC 285
+ R + +VM + DI ++++ VA + D IDIL++ G+T + +MA
Sbjct: 290 RTGD---RIQTQVMNDVDHFVDILDMNDEDVARRIHADGIDILIDFNGYTGEARPAIMAM 346
Query: 286 QPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG 345
+PAPV V W+GYP + G P DY I D PP+ + + E+++RLP CY P+
Sbjct: 347 RPAPVAVNWLGYPGSMGTPFHDYVIADDFTIPPDFELYYSEKVVRLP----CYQPNDRQR 402
Query: 346 PVC------PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD 399
V L F FN L K T + + IL VPN L + +
Sbjct: 403 LVADITWTREAAGLPANATVFCGFNGLQKFTAPMWARFMDILSRVPNGVLWLLDG---GE 459
Query: 400 SVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM 459
+ R + G+ R+ P L+N +H+ Y L D+ LDT P TT ++L+M
Sbjct: 460 RINERLRQEAIKHGVTPDRIIFAPK-LINAEHLSRYPLADLFLDTSPCGAHTTASDALWM 518
Query: 460 GVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRD 519
GVP +T+AG A V SL GL L+ ++YV+ A+ L +D A R L
Sbjct: 519 GVPVLTVAGRGFASRVCGSLAVAAGLGELVCTTFEDYVEKAVDLGNDKRRRAVYREKLAA 578
Query: 520 LMSKSPVCDGQNFALGLESTYRNMWHRYCKGD--VPSLKRMEMLQQ 563
+ + D L++ MW + G VP L ME+ +
Sbjct: 579 NRNTCDLFDTDKLVTHLDALLEGMWDDFVAGRVPVPDLANMEVYDE 624
>gi|91762519|ref|ZP_01264484.1| Predicted O-linked N-acetylglucosamine transferase [Candidatus
Pelagibacter ubique HTCC1002]
gi|91718321|gb|EAS84971.1| Predicted O-linked N-acetylglucosamine transferase [Candidatus
Pelagibacter ubique HTCC1002]
Length = 557
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 233/462 (50%), Gaps = 29/462 (6%)
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+E+A N + L ++ +++ +I Y+ KI+P S+ L ++NY +
Sbjct: 103 VEEAYKINQSDERLLLGLSKIHLYLANLNESIKYYKILFKINPKSKINRDEFLTSLNYAS 162
Query: 149 EGHDD----------KLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTH 198
+ KL E ++D ++ Y+ ++ N K+ + IG++S D+ TH
Sbjct: 163 GITQEYYLSECKNYLKLIETNKD-----LKDYN--YNFKNLKN--NKIKIGFLSSDFKTH 213
Query: 199 SVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
VS+F++ L+ + +++ + S + K+ I K++ K W +I + + +
Sbjct: 214 PVSFFLKGLLLNLNKDKFEISLISNLHKSHYDNITDELKLLTKD--WINISSLSDSEATN 271
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP 318
+VR ++DIL++L G N+ +++ + A +QV W+GY NTTG+ +DY I D
Sbjct: 272 LVRSFELDILIDLCGFFRGNRFQVISNRAAKIQVCWLGYNNTTGIKNMDYLIADHNLIKK 331
Query: 319 ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWA 378
E ++ + E+++ LP+ + T S P N T+ SFNN KI+ + VW+
Sbjct: 332 EEEKLYSEKVLFLPKIWNAMTLSDS----LPEIQKNNLIFTYASFNNFHKISDDTIDVWS 387
Query: 379 RILCAVPNSRLVVK-CKPFCC--DSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435
+IL NS++++K PF + ++ L G+E ++ + DH+ Y
Sbjct: 388 KILNN-SNSQIILKNSMPFSIVGEELKLNLLRKFIARGVEKKKILFINRKKDFQDHLGLY 446
Query: 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDE 495
+ +D++LDTFPY G TTT +++ MGVP +TM G G S+ + +++ IA+N+D+
Sbjct: 447 NNVDVALDTFPYPGVTTTFDAVLMGVPVLTMKGHNLNSRCGESININLQMQNFIAENKDD 506
Query: 496 YVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
Y AL L + L N +LR+ + KS + D ++F E
Sbjct: 507 YFNKALSLQKEKNILQNFGKNLREKVLKSSLFDTKDFTKSFE 548
>gi|159185979|ref|NP_356665.2| hypothetical protein Atu3976 [Agrobacterium fabrum str. C58]
gi|159141113|gb|AAK89450.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 681
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 150/583 (25%), Positives = 242/583 (41%), Gaps = 60/583 (10%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N V ++ A+ + NP A NLG +D + AVE + +
Sbjct: 69 FNYAVMLNQLGDRAGAVQAFRACLKANPEFAPGHINLGRALEDAGLIGHAVEQWSHYAEV 128
Query: 62 KPNFS--------QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
N +L N+G V GK++ A + +A P EA + L +
Sbjct: 129 TKNVDAETIGHRHMTLQNMGRVLEGAGKLEEAETALLQAFELRPELPEAGQHWASLRQ-- 186
Query: 114 GSISLAIDAYEQCL--KIDPDSRNAGQNRLLAMNYINEG--HDDKLFEAHRDWG------ 163
QC + P + + + L AM+ + DD +F+ + +
Sbjct: 187 ----------RQCKWPVLAPSNHISPRKMLDAMSSLTLSCYADDPMFQLAKAYRLSKTLI 236
Query: 164 ------KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYK 217
RF R + S + L +GY+S D H+V + + L HD + +
Sbjct: 237 GARPDLSRFPRRSPKQKSGTGQR-----LRVGYLSSDLRDHAVGFALCEVLELHDKDSLE 291
Query: 218 VVVY--SAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT 275
V Y V D+ R + V WRDI+G+D+ A+ + D+IDIL+++ G+T
Sbjct: 292 VFAYYCGNVRGTDSTQERIKAAVH----CWRDIHGVDDATAASQIIADEIDILIDVNGYT 347
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
+ + + A +PAPV V++ GYP + G P Y I+D PPE + + E+++R+
Sbjct: 348 KDARAKIFAYRPAPVIVSFCGYPGSMGSPFHQYLISDGYMIPPENEIYYSEKVLRIA--- 404
Query: 336 LCYTPSPEAGPVCPTPA-----LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
C P PV P+ L + SFN + KIT W IL P S L
Sbjct: 405 -CDQPLDRKRPVAARPSRADVGLPEDAFVYASFNGMQKITENCFARWMTILSETPGSLLW 463
Query: 391 VKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT 450
+ D V R E+ G+ S R+ P N H+ L D+ LDTFPY
Sbjct: 464 LLTGD---DDVNQRLRDLAEKSGVASERLVFAPKA-QNPQHIARIGLADLFLDTFPYGAH 519
Query: 451 TTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510
+T +++ G+P +TM G A S++T G+ +I + ++YV A+ D +L
Sbjct: 520 STASDAITSGLPVLTMYGKTFAARFCGSIVTAAGVPEMICSSPEDYVARAIGFERDRQSL 579
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+R S+ S + D A LE + M +G+ P
Sbjct: 580 LEVRESIARQRETSVLRDIPALARRLEELFWQMQGECERGETP 622
>gi|384254151|gb|EIE27625.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 945
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 158/629 (25%), Positives = 256/629 (40%), Gaps = 86/629 (13%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECY----QMA 58
NL Y E K + AI Y A P+ EA NNLG ++ D+A++CY Q+
Sbjct: 319 NLAGVYYEQGKLEQAIATYREALVHEPNFPEAYNNLGNALREAGRADEAIQCYTLCIQLQ 378
Query: 59 LSIKP----------------------NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
L+ P S + NNLG + +QG+ A E
Sbjct: 379 LARPPAATPSGRNISPLPAVAAQAQSQRLSVAYNNLGGILKMQGRAAEAIACYEHVALLQ 438
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDD-KL 155
P AEA+ NL Y+DA AI +Y + L + PD A N + ++ + E D L
Sbjct: 439 PESAEAHANLASCYKDAARQDAAITSYRRALTLRPDFPEAFANLVHSLQCVCEWRDRPAL 498
Query: 156 FEA---------------------------HRDWGKRFMRLYSQY--TSWDNTKDPE--- 183
F+ + D + Y+Q+ + + P+
Sbjct: 499 FQRMEVEVRNDLQMGRLPPVQPFHAMAYPFNADLALAISQKYAQFCAITASRMRAPQLAH 558
Query: 184 ---RPLV------IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRF 234
RPL I YVS D+ H +S+ + + HD ++ Y+ +++ +
Sbjct: 559 PAARPLAPGERLRIAYVSSDFGNHPLSHLMGSVFGLHDRSRVEIFCYALSASDNSE---W 615
Query: 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTW 294
R+++ + + D+ +A + D I I V L G+T + + A QPAPVQ ++
Sbjct: 616 RQRIEMEAEHFLDVSAWSVPDIAGKMSADGIHIGVNLNGYTKGARNEIFALQPAPVQTSY 675
Query: 295 IGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC--YTPS-----PEAG-P 346
+G+P T G + Y ITD + P + + E L +P C+ Y + EA P
Sbjct: 676 MGFPATMGASFLPYLITDKVVAPDSCRPCYSENLALMPNCYFVNDYKHAHMDVLDEANLP 735
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRF 405
L I + N L K P+ W IL VPNS L +++ P+ +R
Sbjct: 736 SRTEVGLPEDRIVYSCSNQLYKYDPETFTTWCNILRRVPNSVLWLLRFPPYGEPRIR--- 792
Query: 406 LSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVT 465
+ G++ R+ + + H++ + D+ LDT TT C+ L+ G P VT
Sbjct: 793 -AEAAARGVDPARI-IFTDVAAKPLHIRRSGIADVFLDTPLCNAHTTGCDVLWGGCPMVT 850
Query: 466 MAGSVHAHNVGVSLLTKVGLKH-LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
+ A V SL GL H ++ ++ EY A++L + +LR L+
Sbjct: 851 LPLERMASRVAASLCYATGLGHEMVVSSQHEYEDRAVELGLNHAMRLSLRERLKRARLTC 910
Query: 525 PVCDGQNFALGLESTYRNMWHRYCKGDVP 553
P+ D + LE + MW +C+G P
Sbjct: 911 PLFDTAGWVPDLEKVFFRMWDVHCEGRGP 939
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
LG E + A+ Y+ A P A+A +G+ K+ ++A C+Q + ++
Sbjct: 251 GLGDLMRERGEHQSAVACYQEAVRARPGYADAFTGMGISLKELKRREEAEACFQQVVRLR 310
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P S SL NL VY QGK++ A +A+ P + EAYNNLG R+AG AI
Sbjct: 311 PGCSLSLGNLAGVYYEQGKLEQAIATYREALVHEPNFPEAYNNLGNALREAGRADEAIQC 370
Query: 123 YEQCLKID----PDSRNAGQN 139
Y C+++ P + +G+N
Sbjct: 371 YTLCIQLQLARPPAATPSGRN 391
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A ++ FDMAIV+Y+ A P +A NN+ + + A++CYQ AL++
Sbjct: 147 NLANALQQLGNFDMAIVYYQSALRLKPTFTDAYNNMASALVQKGLVPAALQCYQTALAVN 206
Query: 63 PNFSQSLNNLGVVYTVQG--KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
PN NLG ++ QG A +A+ + +A A+ LG L R+ G A+
Sbjct: 207 PNLVDVHTNLGDLWRAQGPSGQSEAQRCYAEALRVDVRHAPAWRGLGDLMRERGEHQSAV 266
Query: 121 DAYEQCLKIDPDSRNA 136
Y++ ++ P +A
Sbjct: 267 ACYQEAVRARPGYADA 282
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G Y ++ +++ I F + + AEA NL + N D A+ YQ AL +KP
Sbjct: 114 IGAVYYQLGQYEQCIAFNDRCILLDAQMAEAHANLANALQQLGNFDMAIVYYQSALRLKP 173
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG--SISLAID 121
F+ + NN+ +G + AA + + A+A NP + + NLG L+R G S A
Sbjct: 174 TFTDAYNNMASALVQKGLVPAALQCYQTALAVNPNLVDVHTNLGDLWRAQGPSGQSEAQR 233
Query: 122 AYEQCLKID 130
Y + L++D
Sbjct: 234 CYAEALRVD 242
>gi|428306910|ref|YP_007143735.1| hypothetical protein Cri9333_3397 [Crinalium epipsammum PCC 9333]
gi|428248445|gb|AFZ14225.1| hypothetical protein Cri9333_3397 [Crinalium epipsammum PCC 9333]
Length = 719
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 185/383 (48%), Gaps = 22/383 (5%)
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR 235
W N ++ R L IGY++ +HSV + Y++++ ++ +Y
Sbjct: 350 WKNPQEKNRKLKIGYIAHTLRSHSVGWLSRWIFKYYNHELFETHLY-----------LIH 398
Query: 236 EKVMKKGGIWRDIYGI-----DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
+ + G I ++ GI + +++AA ++ D+IDILV+L T + +MA +PAPV
Sbjct: 399 QSLEDNGWIGAEVDGISNFGSEPEQIAAKIKADQIDILVDLDSITLDITCTVMALKPAPV 458
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT 350
QVTW+G+ + +G+P +DY + DS P + + + RLP ++ A P
Sbjct: 459 QVTWLGW-DASGIPAVDYFLADSYVLPENAQDYYRATIWRLPTTYVAVDGFEVAVPTLRR 517
Query: 351 PAL---TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLS 407
L + I F S + K P ++ +I+ VPNS ++K + +++ F
Sbjct: 518 DDLGIPADAVIYF-SAQHGHKRHPDTTRLQMQIIKQVPNSYFLIKGRSDEA-TIKQFFTK 575
Query: 408 TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
E G++ R+ LP + + H + DI LDT+PY G TTT E+L+MGVP VT
Sbjct: 576 IAESEGVDPSRLIYLPRDINEYVHRANLGIADIVLDTYPYNGATTTLETLWMGVPLVTRV 635
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G A + L G+ IA + EYV+ ++L D + + LR SP+
Sbjct: 636 GKQFAARNSYTFLMNAGVTEGIAWTDAEYVEWGVKLGLDSSLRQQVAWKLRQSRQTSPLW 695
Query: 528 DGQNFALGLESTYRNMWHRYCKG 550
+ Q F + LE Y+ MW RY +
Sbjct: 696 NAQQFTMELEKAYQQMWERYIES 718
>gi|425445187|ref|ZP_18825223.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389734921|emb|CCI01528.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 719
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 186/374 (49%), Gaps = 13/374 (3%)
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+P++ L IGY++ H V + YH+ + + + +Y D T ++ +
Sbjct: 355 NPDKKLKIGYIAQTLKRHPVGLLSRWTINYHNREQFDIHLYMVSQPVDEITKQWFSNPVD 414
Query: 241 KGGIWRDIYGIDEKKVAAM--VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
K IY +A ++ED IDILV+L T + ++A +PAP+QV W+G+
Sbjct: 415 K------IYHATADSLATYRKIKEDNIDILVDLDSGTGPMVVQVIALKPAPIQVNWLGF- 467
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL--TNG 356
+ +GLP +DY + D P + + E++ RLP+ F+ A P L N
Sbjct: 468 DGSGLPAVDYLLADPYVLPENAPEYYQEKIWRLPDAFVAVDGFEIAVPTLRREDLGINND 527
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+ + S K P ++++ +I+ +VPNS +++ +S+ F ++G+E+
Sbjct: 528 AVIYLSSQTAIKRNPAMIRLQMQIIKSVPNSYFLIQGVA-DDNSLWDLFCQIAAEVGVET 586
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ +LP I + ++ D+ LDT+P+ G TTT E+L+MG+P V G + G
Sbjct: 587 NRIKMLP-IYQTETYRANLAIADVVLDTYPFNGGTTTLETLWMGIPLVVKVGQQWSSRNG 645
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EYVQ ++L D +R LR SP+ + + F L
Sbjct: 646 YTLMMNAGITEGIAWSDEEYVQWGIKLGLDKNVREEVRWKLRKSRHTSPLWNAKQFTRDL 705
Query: 537 ESTYRNMWHRYCKG 550
E+ YR MW+ YC+
Sbjct: 706 ETAYRQMWNIYCQS 719
>gi|335035927|ref|ZP_08529257.1| hypothetical protein AGRO_3257 [Agrobacterium sp. ATCC 31749]
gi|333792491|gb|EGL63858.1| hypothetical protein AGRO_3257 [Agrobacterium sp. ATCC 31749]
Length = 681
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/583 (25%), Positives = 241/583 (41%), Gaps = 60/583 (10%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N V ++ A+ + NP A NLG +D + AVE +
Sbjct: 69 FNYAVMLNQLGDRAGAVQAFRACLKANPEFAPGHINLGRALEDAGLIGHAVEQWSHYAEA 128
Query: 62 KPNFS--------QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
N +L N+G V GK++ A + +A P EA + L +
Sbjct: 129 TKNVDAETIGHRHMTLQNMGRVLEGAGKLEEAETALLQAFELRPELPEAGQHWASLRQ-- 186
Query: 114 GSISLAIDAYEQCLK--IDPDSRNAGQNRLLAMNYINEG--HDDKLFEAHRDWG------ 163
QC + P + + L AM+ + DD +F+ + +
Sbjct: 187 ----------RQCKWPILAPSNHIPARKMLDAMSSLTLSCYADDPIFQLAKAYRLSKTLI 236
Query: 164 ------KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYK 217
RF R + S + L +GY+S D H+V + + L HD + +
Sbjct: 237 GARPDLSRFPRRSPKQKSGTGQR-----LRVGYLSSDLRDHAVGFALCEVLELHDKDSLE 291
Query: 218 VVVY--SAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHT 275
V Y V D+ R + V WRDI+G+D+ A+ + D+IDIL+++ G+T
Sbjct: 292 VFAYYCGNVRSTDSTQERIKAAVH----CWRDIHGVDDATAASQIIADEIDILIDVNGYT 347
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
+ + + A +PAPV V++ GYP + G P Y I+D PPE + + E+++R+
Sbjct: 348 KDARAKIFAYRPAPVIVSFCGYPGSMGSPFHQYLISDGYMIPPENEIYYSEKVLRIA--- 404
Query: 336 LCYTPSPEAGPVCPTPA-----LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
C P P+ P+ L + SFN + KIT W IL P S L
Sbjct: 405 -CDQPLDRKRPIAARPSRADVGLPEDAFVYASFNGMQKITENCFARWMTILSETPGSLLW 463
Query: 391 VKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT 450
+ D V R E+ G+ S R+ P N H+ L D+ LDTFPY
Sbjct: 464 LLTGD---DDVNQRLRDLAEKSGVASERLVFAPKA-QNPQHIARIGLADLFLDTFPYGAH 519
Query: 451 TTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510
+T +++ G+P +TM+G A S++T G+ +I + ++YV A+ D +L
Sbjct: 520 STASDAITSGLPVLTMSGKTFAARFCGSIVTAAGVPEMICSSPEDYVARAIGFERDRQSL 579
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+R S+ S + D A LE + M +G+ P
Sbjct: 580 LEVRESIARQRETSVLRDIPALARRLEELFWQMQGECERGETP 622
>gi|73540476|ref|YP_294996.1| hypothetical protein Reut_A0772 [Ralstonia eutropha JMP134]
gi|72117889|gb|AAZ60152.1| TPR repeat protein [Ralstonia eutropha JMP134]
Length = 611
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/549 (26%), Positives = 246/549 (44%), Gaps = 54/549 (9%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM---IEKAI 93
NLG + L+ A + Y A+ + P F Q NLG+VY G AA + +
Sbjct: 70 NLGTSLSTLEKLEDARQAYLRAIELSPAFVQPHFNLGLVYERLGNPSAAIAQWLWVANTV 129
Query: 94 AAN-----PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN--- 145
+A P A NNLG L + + A+ ++ L+++P+ + + +
Sbjct: 130 SAKDTENRPLQLSALNNLGRLLENERKYADALVYLQRSLEMEPNQPDVLHHWVFLRAKQC 189
Query: 146 ----YIN-EGHDDKLFEAHRDWGKRFMRLYS-----QYTSWDN-----------TKDPER 184
Y EG D +L R M S Q T+ N T P +
Sbjct: 190 EWPVYAQVEGVDPELMR--RSTSALAMIALSDDPQEQLTAAQNYVANKINCNVPTLAPAK 247
Query: 185 P-----LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
P + +GY+S D H V+ H+ ++V Y + ++ R++++
Sbjct: 248 PYGHKKIRVGYLSSDLCLHPVAMLTAELFELHNRDRFEVYGYCWSREDNSA---MRKRII 304
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ I G+ ++ A ++RE +IDILV+L G T + G++A +P P+Q+T++G P
Sbjct: 305 ASMDRFERIQGMSDEAAARLIREHEIDILVDLHGQTLGARAGILAYRPTPIQITYLGLPA 364
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC-----YTPSPEAGPVCPTPALT 354
TTG P +DY I D P E + + E+ + +P+ + T +P + C PA
Sbjct: 365 TTGFPFVDYVIADRFLIPEEYARFYSEKPLYMPDVYQVSDRKRITGTPPSRESCNLPA-- 422
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
+GF+ F SFNN K TP V W RIL VP S L + ++ E+LG+
Sbjct: 423 DGFV-FCSFNNNYKFTPAVFGTWMRILSRVPGSVLWLLADNEWAEA---NLRKEAEKLGV 478
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
+ R+ P + +++ ++ D+ LDTFP+ TT ++L+ G+P +T +G A
Sbjct: 479 DGGRLIFAPRV-APENYLARFAAADLFLDTFPFNAGTTANDALWTGLPVLTRSGRSFASR 537
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
+ +LLT L LI + ++Y + A+ LA+ +R L + + D F
Sbjct: 538 MAGALLTAAELDELITYSPNDYEETAVALANAPERCRRIRDKLHQVRESGKLFDTPRFVG 597
Query: 535 GLESTYRNM 543
LE + ++
Sbjct: 598 HLEDQFTHL 606
>gi|292489149|ref|YP_003532036.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
SPINDLY [Erwinia amylovora CFBP1430]
gi|292900267|ref|YP_003539636.1| transferase [Erwinia amylovora ATCC 49946]
gi|428786109|ref|ZP_19003592.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase SPINDLY [Erwinia
amylovora ACW56400]
gi|291200115|emb|CBJ47241.1| putative transferase [Erwinia amylovora ATCC 49946]
gi|291554583|emb|CBA22212.1| probable UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase SPINDLY [Erwinia
amylovora CFBP1430]
gi|426275504|gb|EKV53239.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase SPINDLY [Erwinia
amylovora ACW56400]
Length = 1127
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 256/560 (45%), Gaps = 59/560 (10%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
+A G+ +A + ++ + +E L +Y +L + C Q A+
Sbjct: 600 IASGQDSMLPLAKILFQHLLKQDDRNSELWLKLSGMYNMAHDLAREERCLQNAIQRDAAN 659
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ ++ + VY+ G+++ A + +KA+ + + +A ++ L I +++
Sbjct: 660 AVNMLRMATVYSHTGRLEEAKALCQKALKGQLS--------AICRANAQAMYLFILSHDA 711
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK---RFMRLYSQYTSWDNTKDP 182
L + F AHR++G+ R+ R + +
Sbjct: 712 VLTAEEK-----------------------FLAHREFGQLAHRWARAVMPTSRQPQPRGE 748
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+ IG+VS D +H V +F + Y++ Y A K DA + ++
Sbjct: 749 REKIRIGFVSGDLNSHPVHHFFWPVWKTLNRDRYELYAY-ATGKQDAVSKGYQSSAT--- 804
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
++R + ++ ++A + ED ID+L++L+G T N+L A +PAP+Q++WIG+ TTG
Sbjct: 805 -VFRHVAALNAVELARQISEDGIDVLIDLSGFTNGNRLLSFALKPAPIQMSWIGFVGTTG 863
Query: 303 LPTIDYRIT-DSLADPPETKQKHVEELIRLP--ECFLCYTPSPEAGPVCPTPALTNGFIT 359
L +DY I +A+P E E+L+ LP + F + +PE + P PAL NG++T
Sbjct: 864 LQEMDYYIIYHGMAEPGELDGIFSEKLVSLPSAKLFEYHASAPE---INPLPALKNGYLT 920
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
G+FN K+T +L WA+IL A+P++RL+ + +L+ + + G++ +
Sbjct: 921 LGNFNRPQKLTAAMLDCWAKILLALPDARLLF--GHMADQQMSDHYLAEMTRRGVQPPQ- 977
Query: 420 DLLPLILLNHDHMQAYSLM----DISLDTFPYAGTTTTCESLYMGVPCVT-MAGSVHAHN 474
L+ + + Y M DI LD+ PY+ TT +++MGVP +T + GS +
Sbjct: 978 ----LVFRSKQNFAGYMAMHHEVDILLDSHPYSAGTTAQHAIWMGVPLITAIEGSAVSRT 1033
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
+++ T + L + + DEY Q + S L +R S+R +++ N A
Sbjct: 1034 TAMAMKT-LNLDEFVCNSLDEYAQKVIAWNSRYQELDAIRQSMRARIAQREQAHSHN-AY 1091
Query: 535 GLESTYRNMWHRYCKGDVPS 554
E +W R+ G P+
Sbjct: 1092 YFEQMIDAVWQRHLAGQPPA 1111
>gi|401563635|ref|ZP_10804582.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC6]
gi|400189642|gb|EJO23724.1| glycosyltransferase family 41 domain protein [Selenomonas sp.
FOBRC6]
Length = 485
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 175/335 (52%), Gaps = 15/335 (4%)
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ Y V Y+ +AD T R + + + + ++ A +R D+ID+LV+L G
Sbjct: 154 EQYDVYAYALDDRADGFTESLRGALN-----YHALANLSIEEQAERIRADEIDVLVDLGG 208
Query: 274 HTANN-KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
HT L ++A +PAPVQ++ IG+ TTG+P +D +TD + P T++ + EEL+RLP
Sbjct: 209 HTDGGMTLMVLAHRPAPVQLSGIGWFATTGVPFVDGFLTDDVLSPAGTEEFYSEELLRLP 268
Query: 333 ECFLCYTPSP--EAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
F +TP V PA + +TFG F N KI + L+VW RIL +P ++L+
Sbjct: 269 YAF-HFTPDAAMRTSTVAERPA--DAPVTFGVFQNFMKINEECLKVWGRILKKLPQAQLI 325
Query: 391 VKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT 450
++ L +E L L + R+ + D++ Y +DI+LDTFPY G
Sbjct: 326 LQDAAVDSPLRVTTILEMIEGLKLPAKRIFVRT---GKRDYLGDYGDIDIALDTFPYTGG 382
Query: 451 TTTCESLYMGVPCVTMAGSV-HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTA 509
+T +LYMGVP V++ G HA +G ++LT G IA++ Y LA+++A D+ A
Sbjct: 383 ASTATTLYMGVPIVSLRGETHHASRLGAAMLTAAGKSAWIAEDARAYENLAVRMAEDIAA 442
Query: 510 LANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
+ R +LR + KS DG + + +W
Sbjct: 443 VRASRATLRAEVEKSAFMDGAAYLSAVTDAIECIW 477
>gi|386335303|ref|YP_006031473.1| tetratricopeptide-like reapts harboring protein [Ralstonia
solanacearum Po82]
gi|334197753|gb|AEG70937.1| tetratricopeptide-like reapts harboring protein [Ralstonia
solanacearum Po82]
Length = 672
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 150/557 (26%), Positives = 250/557 (44%), Gaps = 22/557 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG Y ++ A+ Y A + N++G + D+A+ Q A+ +
Sbjct: 123 YNLGNLYSRSRQYQAALGQYREALKRAEGRPDLHNSMGCACSELGLTDEALHHLQRAVQL 182
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA-IAANPTYAEAYNNLGVLYRDAGSISLAI 120
P ++++ NLG++Y ++ AAA ++ A + +P+ A+A + ++ + A
Sbjct: 183 APRYAEAWLNLGLLYRDTRQLKAAAGALQHAALPGDPSEAQALSEWAMVQMSLCDWTAAA 242
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+ L + R AG + + N D+ A + + + T +
Sbjct: 243 RTESRLLGLLRAGRAAGVVPFVTLALPNCTASDQRAAAAQATRQAPPPV-DTMTDDPAER 301
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA-DAKTIRFREKVM 239
P R + +GY+S D H+ +Y + L + D ++ +YS + D R R
Sbjct: 302 SPGR-IRVGYLSADLHAHATAYLLAGVLEHRDTACFETFLYSYGPQTHDDMQNRLRAACE 360
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ DI + + + A + D++D+L++L G T + +L + A +PAP+ V W+GYP
Sbjct: 361 H----FVDIAPLSDGQAAERIAADRLDLLIDLKGFTKHARLDIGAMRPAPILVNWLGYPG 416
Query: 300 TTGLPTI-DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----AL 353
T G + DY I D P + + E L +P C Y P+ + P P L
Sbjct: 417 TLGNRRLADYLIGDPAVTPVSQQAQFEETLALMPHC---YQPTDSRREILPPPDRAELGL 473
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
+ F FN KIT Q W IL P + L + +P S R L + G
Sbjct: 474 PADGLVFCCFNQAYKITEARAQTWFAILGRTPGAVLWL-LEPDA--SARAALLEKAGRHG 530
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ S R+ P ++ H+ L D++LDTFPY TT + L+ GVP +T AG A
Sbjct: 531 IASERLVFAPQVV-QRAHIARLQLADLALDTFPYTSHTTASDLLWAGVPLLTRAGDTMAS 589
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
V S+L GL L+ ED+YV A++LA D ALA++R+ + +P+ D FA
Sbjct: 590 RVAASILQAAGLHDLVVTTEDDYVNAAVRLAGDAQALASVRLRAQ-AARNTPLFDTGTFA 648
Query: 534 LGLESTYRNMWHRYCKG 550
LE+ + + R G
Sbjct: 649 RDLETLFGRIVERGPHG 665
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
Y A +P +A NLG +Y A+ Y+ AL N++G +
Sbjct: 107 LYLKAIELDPDAPDAHYNLGNLYSRSRQYQAALGQYREALKRAEGRPDLHNSMGCACSEL 166
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
G D A +++A+ P YAEA+ NLG+LYRD
Sbjct: 167 GLTDEALHHLQRAVQLAPRYAEAWLNLGLLYRD 199
>gi|421900323|ref|ZP_16330686.1| tetratricopeptide-like reapts harboring protein [Ralstonia
solanacearum MolK2]
gi|206591529|emb|CAQ57141.1| tetratricopeptide-like reapts harboring protein [Ralstonia
solanacearum MolK2]
Length = 672
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 250/557 (44%), Gaps = 22/557 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG Y ++ A+ Y A + N++G + D+A+ Q A+ +
Sbjct: 123 YNLGNLYSRSRQYQAALGQYREALKHAEGRPDLHNSMGCACSELGLTDEALHHLQRAVQL 182
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA-IAANPTYAEAYNNLGVLYRDAGSISLAI 120
P ++++ NLG++Y ++ AAA ++ A + +P+ A+A + ++ + A
Sbjct: 183 APRYAEAWLNLGLLYRDTRQLKAAAGALQHAALPGDPSEAQALSEWAMVQMSLCDWAAAA 242
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+ L + R AG + + N D+ A + + + T +
Sbjct: 243 RTEARLLGLLRAGRAAGVVPFVTLALPNCTVSDQRAAAAQATRQAPPPV-DTMTDDPAER 301
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA-DAKTIRFREKVM 239
P R + +GY+S D H+ +Y + L + D ++ +YS + D R R
Sbjct: 302 SPGR-IRVGYLSADLHAHATAYLLAGVLEHRDTARFETFLYSYGPQTHDDMQNRLRAACE 360
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ DI + + + A + D++D+L++L G T + +L + A +PAP+ V W+GYP
Sbjct: 361 H----FVDIAPLSDGQAAERIAADRLDLLIDLKGFTKHARLDIGAMRPAPILVNWLGYPG 416
Query: 300 TTGLPTI-DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----AL 353
T G + DY I D + P + + E L +P C Y P+ + P P L
Sbjct: 417 TLGNRRLADYLIGDPVVTPVSQQAQFEETLALMPHC---YQPTDSRREILPPPDRAAVGL 473
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
+ F FN KIT Q W IL P + L + +P S R L + G
Sbjct: 474 PADGLVFCCFNQAYKITEARAQTWFAILGRTPGAVLWL-LEPDA--SARAALLEKAGRHG 530
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ S R+ P + H+ L D++LDTFPY TT + L+ GVP +T AG A
Sbjct: 531 IASERLVFAPQVA-QRAHIARLQLADLALDTFPYTSHTTASDLLWAGVPLLTRAGDTMAS 589
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
V S+L GL L+ ED+YV A++LA D ALA++R+ + +P+ + FA
Sbjct: 590 RVAASILQAAGLHDLVVTTEDDYVNAAVRLAGDAQALASVRLRAQ-AARNTPLFETGTFA 648
Query: 534 LGLESTYRNMWHRYCKG 550
LE+ + + R G
Sbjct: 649 RDLETLFGRIVERGAHG 665
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
Y A +P +A NLG +Y A+ Y+ AL N++G +
Sbjct: 107 LYLKAIELDPDAPDARYNLGNLYSRSRQYQAALGQYREALKHAEGRPDLHNSMGCACSEL 166
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
G D A +++A+ P YAEA+ NLG+LYRD
Sbjct: 167 GLTDEALHHLQRAVQLAPRYAEAWLNLGLLYRD 199
>gi|328714601|ref|XP_001947755.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Acyrthosiphon pisum]
Length = 1076
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 157/613 (25%), Positives = 260/613 (42%), Gaps = 117/613 (19%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
MYNLG +D+A+ Y+ A P+ A+A ++ VI+ ++D +KA+E Y+M +S
Sbjct: 456 MYNLG-------HWDLALTRYKHAIEIMPNLADAYCDMAVIFDEQDLFEKAIEYYKMTIS 508
Query: 61 IKPN------------FSQSLNNLGVV--YTVQGKMDA---------------------A 85
+KP+ F Q +N L + Y + K D A
Sbjct: 509 LKPSNLNAHLNLADILFKQKINLLKAITHYKIALKYDNTSVDIYLQIGNIYKELNMSKDA 568
Query: 86 AEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS-------RNAGQ 138
AI +P EAY ++G + +D+ + AI AYE LK+ PD N Q
Sbjct: 569 LHSFYMAIQHDPQCLEAYISVGSILKDSDNFIEAIRAYESALKLQPDHPDVFCHLVNCLQ 628
Query: 139 NRLLAMNY----------INEG-----------HDDKLFEAHRDWGKRFMRLYSQYTSWD 177
+Y INE HD +F + + +++
Sbjct: 629 KVCDWSDYDAHVKKLQEIINEQLNDDDVLSLLPHDALMFPLSLEELTKIASKFAKQCVQK 688
Query: 178 NTKDPERPLV------------IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVV 225
K + PL IG+VS ++ H ++ +E Q V+ YS +
Sbjct: 689 LNKSIKEPLQFVHPTVFNGNIKIGFVSTNFGKHPITSIMETLTSICKNQQVDVICYS--I 746
Query: 226 KADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMAC 285
++ T + + +D+ + A ++ D I +LV+++G+T + + A
Sbjct: 747 SSNDNTPSW----LNNSEHHKDLSQLKFVDAAKVINSDGIHVLVDMSGYTKGAQTEIFAL 802
Query: 286 QPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF---------- 335
+PAPVQV+W GY T+G +DY ITD + PPE + + E+L
Sbjct: 803 RPAPVQVSWFGYLCTSGTTFMDYFITDRICSPPEHQNVYTEQLNFTNHTIFIGDHKQKFS 862
Query: 336 -----LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
LC+ E T L + F +F+ L KI P L++W IL VP S L
Sbjct: 863 NLQQRLCFDEELERS----TFNLPENVVVFCNFSKLYKIDPFTLRMWITILNNVPKSVLW 918
Query: 391 VKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDISLDTFPY 447
+ D + + + L ++ R+ D +P + H+ L DI LDT Y
Sbjct: 919 L---LHLNDVAENNLRTFADVLNFDTSRIIFADFIP----KYQHLNRIQLADIYLDTHLY 971
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
G ++L+ GVP +T+ G +A V S LT +G+ IA+NE+ Y+ +A++L +
Sbjct: 972 NGHIACLDALWAGVPVITLPGDTYASRVTTSQLTTLGITDTIAQNEENYIDIAIELGLNK 1031
Query: 508 TALANLRMSLRDL 520
+L +R ++ DL
Sbjct: 1032 CSLEKMRKNIWDL 1044
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
+++A + C E NNL +Y +KA+ Y+ L I P+ + LG+ +
Sbjct: 244 FKIAHNCAIECPETLNNLAYVYYKSGKFEKAISKYKQVLEINPDLMNAHFYLGMTHLKIS 303
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
+ AA AI P L V Y ++ L ++ Y++CLK+ P++ N N
Sbjct: 304 EYQNAANAFWNAIVLEPENVTVLKKLAVTYCYVENMVLCVEIYKKCLKLQPENFNL--NL 361
Query: 141 LLAM 144
LAM
Sbjct: 362 ELAM 365
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P+C +A N + ++L A Y LSI+P + N G + K+ A E
Sbjct: 184 PYCVDAWTNYADFLFETNDLVTADFAYVRVLSIEPKLYKVRNKYGKLLLKLNKIKDAKEQ 243
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
+ A E NNL +Y +G AI Y+Q L+I+PD NA
Sbjct: 244 FKIAHNCAIECPETLNNLAYVYYKSGKFEKAISKYKQVLEINPDLMNA 291
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A NP A A +G+ + + D A+ Y+ A+ I PN + + ++ V++ Q +
Sbjct: 438 AILLNPGNAIAHWKMGLTMYNLGHWDLALTRYKHAIEIMPNLADAYCDMAVIFDEQDLFE 497
Query: 84 AAAEMIEKAIAANPTYAEAYNNLG-VLYRDAGSISLAIDAYEQCLKIDPDS 133
A E + I+ P+ A+ NL +L++ ++ AI Y+ LK D S
Sbjct: 498 KAIEYYKMTISLKPSNLNAHLNLADILFKQKINLLKAITHYKIALKYDNTS 548
>gi|456358776|dbj|BAM93221.1| hypothetical protein S58_72570 [Agromonas oligotrophica S58]
Length = 453
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 174/371 (46%), Gaps = 13/371 (3%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GY+S D+ H+ ++ + L HD + ++ +S AD + R ++ +
Sbjct: 85 LRVGYLSNDFHDHATAHLLIEALEAHDRERCELHAFS--FGADDQGA-MRRRLNAAFHAF 141
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
D+ + + A V +IDILV+L G+T + G++ PAPVQV ++GYP T G
Sbjct: 142 HDVAALGDSAAATAVHAAQIDILVDLKGYTRGARTGILMLHPAPVQVNFLGYPGTLGGDI 201
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA---LTNGFITFGS 362
DY ITD P T + E +P + + + P PT A L F
Sbjct: 202 CDYIITDPFVTPLATAADYSESFAYMPHSYQPHGRTALGPP--PTRAEVGLPEAGFVFCC 259
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN K+TP V +W R+L A P+S L + D + G+ R+
Sbjct: 260 FNQAYKLTPTVFDLWCRLLDATPDSVLWL----LASDQAEGNLRGEALRRGVAPGRLVFA 315
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P + +H++ L D+ LDT PY TT ++L+ GVP VT AG A V SLL
Sbjct: 316 P-EMKQSEHLRRLQLADLVLDTAPYGAHTTASDALWAGVPIVTCAGDTFASRVAGSLLHA 374
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
VGL LIA +E +YV +AL LA++ L + LR +P+ D +A L+ Y
Sbjct: 375 VGLPELIAADEADYVAVALTLAAEPHMLQAAKARLRRNRPVTPLFDAAGYARSLQDLYDQ 434
Query: 543 MWHRYCKGDVP 553
MW R G P
Sbjct: 435 MWRRCRSGAAP 445
>gi|186681176|ref|YP_001864372.1| hypothetical protein Npun_F0677 [Nostoc punctiforme PCC 73102]
gi|186463628|gb|ACC79429.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 736
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/551 (24%), Positives = 247/551 (44%), Gaps = 39/551 (7%)
Query: 11 MLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVE----CYQMALSIKPN-F 65
M + +A++ EL H P E +L Y +N + +E CY ++ ++ F
Sbjct: 211 MRQNKVAVLIIELCLHLEPENIELLRHLAAFYLRDNNYSQGIEVAKLCYSLSKTVTDQVF 270
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL-AIDAYE 124
++ L G++ +A +E+ N + NL A + L ++Y
Sbjct: 271 AKHLIQRGLMEAPAYWNEAYTVCLEQEYLLNCLIEQQPINL----ESARVLRLFNANSYA 326
Query: 125 QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPER 184
L+ +P QN++ + +N +++ ++ Y Q + + K
Sbjct: 327 SYLQDNPVKNRQIQNKVAQLCQLNV----------QEYANEIVQRYKQRSLYKANKQ--- 373
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA--DAKTIRFREKVMK-- 240
+ IGY+ + HSV + + + + + + + Y K D + ++ +
Sbjct: 374 -IKIGYLCHCFSQHSVGWLARWLIQHQNRERFDIYGYFINYKQIDDPLQEWYVQQFTQAY 432
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+GGI+ D +A + EDKIDIL++L T + +MA +PAPVQ TW+G+ +
Sbjct: 433 QGGIYSD-------DIAEKIYEDKIDILIDLDSITLDITCEIMALKPAPVQATWLGW-DA 484
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFI 358
+G+P +DY I D P ++ + E++ RLP+ ++ P +L + +
Sbjct: 485 SGIPAVDYFIADPYVLPESAQEYYTEKIWRLPQTYIAVDGFEVGVPTLRRDSLDIPSDAV 544
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
+ S K P Q+ RI+ VPNS ++K ++V+ F+ EQ G+E R
Sbjct: 545 VYLSAQRGFKRHPNTAQLQMRIIKEVPNSYFLIKGLA-DSEAVQKFFMQLAEQEGVECSR 603
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ L L H ++ D+ LDT+PY G TTT E+L+MG+P VT G A +
Sbjct: 604 LRFLQLDPSESVHRANLAIADVILDTYPYNGATTTLETLWMGIPLVTRVGQQFAARNSYT 663
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
++ G+ IA ++EYV+ ++L D + + L+ +P+ + + F +E
Sbjct: 664 MMMNAGIAEGIAWTDEEYVEWGVRLGKDEALRQQVALKLKASRQTAPLWNAKQFTCEMEK 723
Query: 539 TYRNMWHRYCK 549
Y MW RY +
Sbjct: 724 AYEQMWQRYIE 734
>gi|425454003|ref|ZP_18833752.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389799814|emb|CCI20674.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 713
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 180/374 (48%), Gaps = 11/374 (2%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
KD + L IGY++ + HS+ + YHDY + V +Y K D T FR +V
Sbjct: 348 KDTNKVLKIGYIAHTLYNHSIGLISRWLMKYHDYNQFHVSLYLVSQKEDLITENSFRNQV 407
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ ID +A + +D IDILV+L T N +MA + AP+QVTW+G+
Sbjct: 408 NACYNL-----PIDPLMIAEKISQDNIDILVDLDSITNNTTCQVMALKSAPIQVTWLGF- 461
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NG 356
+ +G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 462 DASGIPAIDYYLADNYVLPADAQEYYREKIWRLPNSYICVDGVEVAYPSLRRDDLGIPED 521
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I + + K P+ +++ ++L AVP+S L ++ SV F E+ G+
Sbjct: 522 AINYLTVQTGVKRNPETIRLQLQVLKAVPHSYLSIQGLS-DAKSVEKLFFKVAEEEGINY 580
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ +LPL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 581 ERLKILPLYPTGI-YRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRNS 639
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EY+ ++L D + L + SP+ + F +
Sbjct: 640 YTLMVNAGISEGIAWSDEEYIDWGIKLGKDEQLRRKVIAKLDESRKTSPIWNAHQFTKNV 699
Query: 537 ESTYRNMWHRYCKG 550
E+ YR MW YC+
Sbjct: 700 ENAYRQMWQIYCES 713
>gi|83312891|ref|YP_423155.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
magneticum AMB-1]
gi|82947732|dbj|BAE52596.1| Predicted O-linked N-acetylglucosamine transferase
[Magnetospirillum magneticum AMB-1]
Length = 691
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 173/378 (45%), Gaps = 17/378 (4%)
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P+R + IGY+S + H+ Y HD ++V YS + R + +VMK
Sbjct: 246 PKRRIRIGYLSSYFREHAHGYLTAEMYKLHDRSRFEVFAYSCSRRTGD---RIQTQVMKD 302
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
W DI + ++ VA + D IDIL++ G+T + +MA +PAP+ V W+GYP +
Sbjct: 303 VDHWVDILEMSDEDVAKRIAADGIDILIDFNGYTGEARPAIMAMRPAPIAVNWLGYPGSM 362
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCP------TPALTN 355
G P DY I D PP+ + + E+++RLP CY P+ V L
Sbjct: 363 GTPYHDYVIADDFTIPPDFEMYYSEKVVRLP----CYQPNDRQRQVASINWTREAAGLPA 418
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
F FN + KIT + + + IL VPN L + + + R + G+
Sbjct: 419 NATVFCGFNGVQKITAPMWERFMDILSRVPNGVLWLLDG---GERINERLRQEAIRHGVT 475
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ P L+N +H+ Y L D+ LDT P TT ++L+MGVP +T+AG A V
Sbjct: 476 PDRIIFAPK-LINAEHLSRYPLADLFLDTSPCGAHTTASDALWMGVPVLTVAGRGFASRV 534
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
SL GL ++ EYV+ A++L +D A +R L + + D
Sbjct: 535 CGSLAVAAGLGDMVCTTFAEYVEKAVELGNDKRARQAIRDRLAANRATCDLFDTDKLVSH 594
Query: 536 LESTYRNMWHRYCKGDVP 553
L+ MW + VP
Sbjct: 595 LDGLLAAMWEDFVADRVP 612
>gi|83745815|ref|ZP_00942872.1| Predicted O-linked N-acetylglucosamine transferase [Ralstonia
solanacearum UW551]
gi|207739799|ref|YP_002258192.1| tetratricopeptide-like reapts harboring protein [Ralstonia
solanacearum IPO1609]
gi|83727505|gb|EAP74626.1| Predicted O-linked N-acetylglucosamine transferase [Ralstonia
solanacearum UW551]
gi|206593181|emb|CAQ60087.1| tetratricopeptide-like reapts harboring protein [Ralstonia
solanacearum IPO1609]
Length = 672
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 249/557 (44%), Gaps = 22/557 (3%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG Y ++ A+ Y A + N++G + D+A+ Q A+ +
Sbjct: 123 YNLGNLYSRSRQYQAALGQYREALKHAEGRPDLHNSMGCACSELGLTDEALHHLQRAVQL 182
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA-IAANPTYAEAYNNLGVLYRDAGSISLAI 120
P ++++ NLG++Y ++ AAA ++ A + +P+ A+A + ++ + A
Sbjct: 183 APRYAEAWLNLGLLYRDTRQLKAAAGALQHAALPGDPSEAQALSEWAMVQMSLCDWAAAA 242
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+ L + R AG + + N D+ A + + + T +
Sbjct: 243 RTEARLLGLLRAGRAAGVVPFVTLALPNCTASDQRAAAAQATRQAPPPV-DTMTDDPAER 301
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA-DAKTIRFREKVM 239
P R + +GY+S D H+ +Y + L + D ++ +YS + D R R
Sbjct: 302 SPGR-IRVGYLSADLHAHATAYLLAGVLEHRDTARFETFLYSYGPQTHDDMQNRLRAACE 360
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ DI + + + A + D++D+L++L G T + +L + A +PAP+ V W+GYP
Sbjct: 361 H----FVDIAPLSDGQAAERIAADRLDLLIDLKGFTKHARLDIGAMRPAPILVNWLGYPG 416
Query: 300 TTGLPTI-DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----AL 353
T G + DY I D + P + + E L +P C Y P+ + P P L
Sbjct: 417 TLGNRRLADYLIGDPVVTPVSQQAQFEETLALMPHC---YQPTDSRREILPPPDRAAVGL 473
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
+ F FN KIT Q W IL P + L + +P S R L + G
Sbjct: 474 PADGLVFCCFNQAYKITEARAQTWFAILGRTPGAVLWL-LEPDA--SARAALLEKAGRHG 530
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ S R+ P + H+ L D++LDTFPY TT + L+ GVP +T AG A
Sbjct: 531 IASERLVFAPQVA-QRAHIARLQLADLALDTFPYTSHTTASDLLWAGVPLLTRAGDTMAS 589
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
V S+L GL L+ ED+YV A++LA D ALA++R+ + +P+ + FA
Sbjct: 590 RVAASILQAAGLHDLVVTTEDDYVNAAVRLAGDAQALASVRLRAQ-AARNTPLFETGTFA 648
Query: 534 LGLESTYRNMWHRYCKG 550
LE+ + R G
Sbjct: 649 RDLETLIGRIVERGAHG 665
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
Y A +P +A NLG +Y A+ Y+ AL N++G +
Sbjct: 107 LYLKAIELDPDAPDARYNLGNLYSRSRQYQAALGQYREALKHAEGRPDLHNSMGCACSEL 166
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
G D A +++A+ P YAEA+ NLG+LYRD
Sbjct: 167 GLTDEALHHLQRAVQLAPRYAEAWLNLGLLYRD 199
>gi|307152772|ref|YP_003888156.1| O-linked N-acetylglucosamine transferase [Cyanothece sp. PCC 7822]
gi|306983000|gb|ADN14881.1| O-linked N-acetylglucosamine transferase SPINDLY family-like
protein [Cyanothece sp. PCC 7822]
Length = 718
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 180/371 (48%), Gaps = 16/371 (4%)
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKT-IRFREKVMK 240
P R L IGY++ HSV + L Y + +++V +Y D T FR+K
Sbjct: 357 PHR-LKIGYIAHTLRRHSVGWLSRWLLHYRNRDSFEVALYLVNQPEDELTEAWFRQKA-- 413
Query: 241 KGGIWRDI-YGI-DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
D+ Y +E+ +A + +D+IDILV+L T +MA +PAP+QVTW+G
Sbjct: 414 ------DLTYNFSNERAIALQIEKDEIDILVDLDSITNVITCQVMALKPAPLQVTWLGL- 466
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NG 356
+ +G+P IDY I D P E + + E++ RLP C+L P L +
Sbjct: 467 DGSGVPAIDYYIADDYVLPQEAQDYYHEKIWRLPHCYLAVDGFESGVPTLRREHLNIPSE 526
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I + S K P +++ ++L VPNS L+VK + + FLS + G+
Sbjct: 527 AIIYLSVQTGLKRHPDTIRLQMKVLKEVPNSYLLVKGAG-QTEKIEQLFLSIASEEGVSP 585
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ L + H ++ D+ LDTFPY G TTT E L+MG+P VT G A
Sbjct: 586 NRIRFLSTVASEEIHRANLTIADVVLDTFPYNGATTTLEVLWMGIPLVTRVGQQFAARNS 645
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+ + GL IA ++EY+Q ++L +D + L++ +P+ + Q F +
Sbjct: 646 YTFMIHAGLTEGIAWTDEEYIQWGIKLGTDERLRQQIAWKLKNGRKTAPLWNAQQFTRDM 705
Query: 537 ESTYRNMWHRY 547
E+ Y+ MW ++
Sbjct: 706 ENAYQQMWAKF 716
>gi|254464315|ref|ZP_05077726.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110kDa subunit, putative [Rhodobacterales bacterium Y4I]
gi|206685223|gb|EDZ45705.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110kDa subunit, putative [Rhodobacterales bacterium Y4I]
Length = 714
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 150/590 (25%), Positives = 247/590 (41%), Gaps = 93/590 (15%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK---------------- 81
+G ++ R L+ AV Y+ AL+++ + +L +L +QG+
Sbjct: 131 MGQVHMARGQLENAVALYRKALALEADCLLALRSLAEALPLQGRSAEAAAVLRRAVALAP 190
Query: 82 ------------------MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
++ A E +A P A A LG+L + G + A+ +
Sbjct: 191 DAAALHLALAGLLQKLGAVEEAKEHYTRAAGLQPDLAAAQFQLGLLLKAEGRPAEALPCF 250
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW-GKR----------------- 165
++ L+ P A RL + + + K +E +R G R
Sbjct: 251 DKILRASPSDDRARTERLHVLAELCDWRWVKEYEEYRRLLGLRSSGCDPSALMVMEDNPD 310
Query: 166 FMRLYSQYTSWDNTKD---------PERP--LVIGYV-----SPDYFTHSVSYFIEAPLV 209
+R+ +Q + + + P+RP L GYV + D H + F
Sbjct: 311 LLRVRAQAYASEVFPEVEPQTAPPAPQRPERLKAGYVFSARDAEDVLNHHAAIF-----A 365
Query: 210 YHDYQNYKVVVYS---AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKID 266
HD + V Y+ + + A +R ++ I G AA V+ D +D
Sbjct: 366 AHDRGRFDVFAYATGPGLAEETATALRSTVSCLR---ILDGTSG-----AAAAVKADGLD 417
Query: 267 ILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVE 326
I V+L+G+ N+ G+ + + AP+ ++W G+P T G DY I+DS A PP +++ H E
Sbjct: 418 IAVDLSGYCGGNRSGLFSARLAPLHISWPGFPGTMGTAAFDYLISDSTACPPGSERYHNE 477
Query: 327 ELIRLPECFLCYTPSPEA-GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
L+RLPE L +P+ A GP L + F SF ++ITP+ +W R+L + P
Sbjct: 478 HLLRLPESCLAVSPAETASGPDRADCGLPDAGFVFCSFAAASQITPREFDIWMRLLSSTP 537
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLIL--LNHDHMQAYSLMDISLD 443
+S L + D H + + D L L H+ +L + LD
Sbjct: 538 DSVL------WLLDHGAHAVSNLRRAAAARGVDPDRLIFALPAERKAHLARLTLAGLCLD 591
Query: 444 TFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
TF + ++L GVP +T+ G A G SLL GL LIA + ++Y + A +L
Sbjct: 592 TFTVNASAAARDALAAGVPVLTLPGRQFAARTGASLLRAAGLPDLIADSAEDYEEKAAEL 651
Query: 504 ASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A+D A A L+ LR +P+ FA +ES Y + +Y +G P
Sbjct: 652 AADPEARAALKRRLRAQQQDAPLFSAARFARQIESAYDAAYGQYLRGVAP 701
>gi|428164760|gb|EKX33775.1| hypothetical protein GUITHDRAFT_81153 [Guillardia theta CCMP2712]
Length = 851
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 157/634 (24%), Positives = 282/634 (44%), Gaps = 77/634 (12%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+G + ++A ELA +P AEA NLG+ +D + + AV ++A+ +K
Sbjct: 242 NMGTIHQGRKHNELARESLELAVKIDPELAEAYTNLGIAIQDLGDSETAVRLTELAIRLK 301
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ NN G + ++ +EKA+ EAY L GS S A DA
Sbjct: 302 PSMGAGYNNWG-------RALENSQQLEKAL-------EAYK----LALKHGSSSFA-DA 342
Query: 123 YEQCLKIDPDSRNAGQNRL-----LAMNYINE------GHDDKLFEAHRDWGK-----RF 166
+ C K+ + G N L Y+ E ++ + R + F
Sbjct: 343 F--CAKVYLEHFLCGWNTLSTDMRQVSKYLEENLHPSQASNEPCVQPFRAFAYPLSPILF 400
Query: 167 MRLYSQYTSWDNTKDPERP----------------LVIGYVSPDYFTHSVSYFIEAPLVY 210
M + + + + P + L +GY+S D+ H+V I L
Sbjct: 401 MNVTKKVVDQERVRVPAKSMFKTSPARHLDPRVDRLRVGYMSADFGGHTVGSLIRNLLKM 460
Query: 211 HDYQNYKVVVYS-AVVKADAK--TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
H+ ++V ++ ++K D I + V + W +I+ + + A V + I
Sbjct: 461 HN--RHRVEIFGIGMMKGDGTEWNIDMQTSVDR----WLNIHAMTDHAAAFAVDALEAHI 514
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
LV+L GH+ +++G++ +PAP+ + ++GYP+T+G D+ I D PPET+ + E+
Sbjct: 515 LVDLNGHSKGSRMGVLLRRPAPILIAYLGYPSTSG-GLADFLIADKWVAPPETEHLYYEK 573
Query: 328 LIRLPECFLC-----YTPSP-EAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARIL 381
L+ LP + P P E P L + I FG+F L K+ P + VW RI+
Sbjct: 574 LVFLPYSYFVNDHRQLYPRPFEHSPTRQEYKLPSSGIIFGNFGQLYKVEPSLFDVWVRII 633
Query: 382 CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDIS 441
N+ L + F ++V+ R L ++ GL R+ L L+ ++ H+ ++ D++
Sbjct: 634 KRTSNTSLWLL--KFPKEAVK-RLLKEADKRGLPRDRLVLTSLLPID-SHLAIKAVADVA 689
Query: 442 LDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLAL 501
LDT + G TT ++L+ G+P V+++G G S+ +G+ +A++ ++Y ++A+
Sbjct: 690 LDTNMFNGHTTGADTLWSGLPLVSLSGEQMRSRAGASMAYALGVTRWLARSLEDYEEIAV 749
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY-CKGDVPSLKRMEM 560
+LAS A+ + + + S D +A G E ++ MW + +G S +
Sbjct: 750 RLASKPEAIRRAKEEMEAGIRDSTFFDTAFWAKGFERSWFLMWEAFAAEGKAQS---HHL 806
Query: 561 LQQQVVSEEPSKFSEPTKIIFAKEGSPGSVMPNG 594
+ + EE EP ++ P P G
Sbjct: 807 VASRERLEEYGSDWEPQNLMIGTSRHPRRQTPGG 840
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+++ +G + K D ++ Y+ A NP A A N+G I++ R + + A E ++A+ I
Sbjct: 207 FHIANCWGALGKTDKSLEAYKEATRINPKFAAAYTNMGTIHQGRKHNELARESLELAVKI 266
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P +++ NLG+ G + A + E AI P+ YNN G ++ + A++
Sbjct: 267 DPELAEAYTNLGIAIQDLGDSETAVRLTELAIRLKPSMGAGYNNWGRALENSQQLEKALE 326
Query: 122 AYEQCLK 128
AY+ LK
Sbjct: 327 AYKLALK 333
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHC-------AEACNNLGVIYKDRDNLDKAVECYQM 57
G AY EM ++ A+ + L P A A ++ + DK++E Y+
Sbjct: 169 GNAYQEMGRWQEALDVFMLLLERVPASSMEVEKQATAHFHIANCWGALGKTDKSLEAYKE 228
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS 117
A I P F+ + N+G ++ + + A E +E A+ +P AEAY NLG+ +D G
Sbjct: 229 ATRINPKFAAAYTNMGTIHQGRKHNELARESLELAVKIDPELAEAYTNLGIAIQDLGDSE 288
Query: 118 LAIDAYEQCLKIDPDSRNAGQN 139
A+ E +++ P S AG N
Sbjct: 289 TAVRLTELAIRLKP-SMGAGYN 309
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 3 NLGVAYGEMLK---FDMAIVF----YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECY 55
NLG Y E F+ A+ +++A P EA G Y++ +A++ +
Sbjct: 126 NLGYLYAEGGGGGLFEGAMALAAEKFKVATQLIPQFGEAYTYWGNAYQEMGRWQEALDVF 185
Query: 56 QMALSIKPNFSQSLNNLGVV-------YTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+ L P S + + GK D + E ++A NP +A AY N+G
Sbjct: 186 MLLLERVPASSMEVEKQATAHFHIANCWGALGKTDKSLEAYKEATRINPKFAAAYTNMGT 245
Query: 109 LYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
+++ LA ++ E +KIDP+ A N +A+ + +
Sbjct: 246 IHQGRKHNELARESLELAVKIDPELAEAYTNLGIAIQDLGD 286
>gi|254526504|ref|ZP_05138556.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110kDa subunit
[Prochlorococcus marinus str. MIT 9202]
gi|221537928|gb|EEE40381.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110kDa subunit
[Prochlorococcus marinus str. MIT 9202]
Length = 701
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 143/562 (25%), Positives = 255/562 (45%), Gaps = 45/562 (8%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
++AI + A NP +N+G I + + ++E Y+ AL +K + + L N+
Sbjct: 145 NLAIDLLKKALEVNPISIILLSNMGYILQSLKQYEISIEYYKRALRLKSDDAIILFNIAN 204
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
+ G A + K+I N EA LG +Y + +I+ +++CL I+P++
Sbjct: 205 CFEEIGDYQCAIKFYNKSILNNKNNPEALRALGTIYLNLKEYKKSINYFKKCLSINPNNS 264
Query: 135 NA----------------GQNRLLAMNYINEGHDDK---LFEAHRDWGKRFM---RLYSQ 172
A + +N+ E H + LF A D + R Q
Sbjct: 265 GALSSLINIYAEICEWTQVKKLFKEINHKKELHKEISPFLFLAIEDNPSNHLIRARETCQ 324
Query: 173 YTSWDNTKDPERP----LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
D + +P + IGY S D+ H V ++ + ++++ VYS D
Sbjct: 325 KRYGDKIQKLNKPNNKKIKIGYFSSDFCNHPVMQLMQKLFELYSKNDFELFVYSYGNFKD 384
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
T + ++ V ++DI + ++ + ++ R D++DI ++L G T N +L + + + A
Sbjct: 385 EITAKIKKNVCH----FKDISMLQDEDIVSIARADQLDIAIDLQGFTKNTRLSIFSSRIA 440
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC 348
P+Q++++GYP TTG +DY I D + PPE +Q + E++I +P+ + C S +
Sbjct: 441 PIQISYLGYPGTTGAKFMDYLIADRMLIPPENEQFYSEKIIYMPDSYQCNDNSKIISDIK 500
Query: 349 PTPA---LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHR 404
L + + FNN KIT K +W R+L + S L ++ +++
Sbjct: 501 FKRKDFDLPEDGVIYTCFNNGFKITEKEFNLWMRLLKEIKRSHLWLLSTNLLMIKNLK-- 558
Query: 405 FLSTLEQLGLESLRVDL---LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
++ ++ R+ LPL H+ +SL DI LDTF Y TT ++L+ G+
Sbjct: 559 --DEAKKRNVDPNRISFAKKLPL----EQHLARHSLGDIFLDTFNYNAHTTASDALWAGL 612
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P +T+ G + V SLL +GL LI +E+EY + AL L + + + L+ L
Sbjct: 613 PVLTLKGKSFSSRVSSSLLNSLGLNELICLSEEEYFEKALDLGKNPSKIYLLKQKLVKNK 672
Query: 522 SKSPVCDGQNFALGLESTYRNM 543
P+ D F ES + +
Sbjct: 673 LSYPLFDSHLFVKNFESQLKKV 694
>gi|312173307|emb|CBX81562.1| probable UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase SPINDLY [Erwinia
amylovora ATCC BAA-2158]
Length = 1127
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 251/558 (44%), Gaps = 40/558 (7%)
Query: 16 MAIVFYELAFHFNPHCAEACNNLGVIYKDRDN-LDKAVECYQMALSIKPNFSQSLNNLGV 74
MA+ + C A N L I +D+ L A +Q L S+ L
Sbjct: 575 MALTLATKRLSLDGDCQPAINLLATIASGQDSMLPLAKILFQHLLKQDDRNSELWLKLSG 634
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK--IDPD 132
+Y + + ++ AI + A + +Y G + A ++ LK +
Sbjct: 635 LYNMAHDLAREERCLQNAIQRDAANAVNMLRMATVYSHTGRLEEAKALCQKALKGQLSAI 694
Query: 133 SRNAGQNRLLAMNYINEGHDDKL-----FEAHRDWGK---RFMRLYSQYTSWDNTKDPER 184
R Q AM HD L F AHR++G+ R+ R + +
Sbjct: 695 CRANAQ----AMYLFILSHDAVLTAEEKFLAHREFGQLAHRWARAVMPTSRQPQPRGERE 750
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
+ IG+VS D +H V +F + Y++ Y A K DA + ++ +
Sbjct: 751 KIRIGFVSGDLNSHPVHHFFWPVWKTLNRDRYELYAY-ATGKQDAVSKGYQSSAT----V 805
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
+R + ++ ++A + ED ID+L++L+G T N+L A +PAP+Q++WIG+ TTGL
Sbjct: 806 FRHVAALNAVELARQISEDGIDVLIDLSGFTNGNRLLSFALKPAPIQMSWIGFVGTTGLQ 865
Query: 305 TIDYRIT-DSLADPPETKQKHVEELIRLP--ECFLCYTPSPEAGPVCPTPALTNGFITFG 361
+DY I +A+P E E+L+ LP + F + +PE + P PAL G++T G
Sbjct: 866 EMDYYIIYHGMAEPGELDGIFSEKLVSLPSAKLFEYHASAPE---INPLPALKKGYLTLG 922
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
+FN K+T +L WA+IL A+P++RL+ + +L+ + + G++ +
Sbjct: 923 NFNRPQKLTAAMLDCWAKILLALPDARLLF--GHMADQQMSDHYLAEMTRRGVQPPQ--- 977
Query: 422 LPLILLNHDHMQAYSLM----DISLDTFPYAGTTTTCESLYMGVPCVT-MAGSVHAHNVG 476
L+ + + Y M DI LD+ PY+ TT +++MGVP +T + GS +
Sbjct: 978 --LVFRSKQNFAGYMAMHHEVDILLDSHPYSAGTTAQHAIWMGVPLITAIEGSAVSRTTA 1035
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+++ T + L + + DEY Q + S L +R S+R +++ N A
Sbjct: 1036 MAMKT-LNLDEFVCNSLDEYAQKVIAWNSRYQELDAIRQSMRARIAQREQAHSHN-AYYF 1093
Query: 537 ESTYRNMWHRYCKGDVPS 554
E +W R+ G P+
Sbjct: 1094 EQMIDAVWQRHLAGQPPA 1111
>gi|384263553|ref|YP_005418742.1| Predicted O-linked N-acetylglucosamine transferase [Rhodospirillum
photometricum DSM 122]
gi|378404656|emb|CCG09772.1| Predicted O-linked N-acetylglucosamine transferase [Rhodospirillum
photometricum DSM 122]
Length = 652
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 144/548 (26%), Positives = 238/548 (43%), Gaps = 53/548 (9%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A NLGV R LD+A YQ A++ KP+ + NLG+V QGK AA + E+A+
Sbjct: 116 AWFNLGVELSARGALDEAALAYQNAVAEKPDLHVAAVNLGLVLESQGKHAAALAVWEQAL 175
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRL------------ 141
N+ G L A + L +DP +A + L
Sbjct: 176 QPVEARTALLNHQGRLLETLDRFEEAETLLYKSLLLDPHQHDAYTHWLHLRLKMCAWPVF 235
Query: 142 ------LAMNYINEGHDD----KLFEAHRDWGKRFMRLYSQYTSWDNTKDPE-------- 183
++ + +G LF+ + R+ SW K P+
Sbjct: 236 GPPLPGRSVGEMIQGAGGLSVLSLFDDN-------ARINEWVESWLVRKMPQPCEQLAPP 288
Query: 184 -----RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
+ IGY+S DY H +S + L HD +++++ Y + + + R+++
Sbjct: 289 EGYAHDKIRIGYLSSDYCLHPISMLMVEVLERHDRSSFEIIGYCSSPEDGSG---LRQRI 345
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ + + ++ +A +R D+IDILV+L G T +LG + +PAPVQVT++GY
Sbjct: 346 LAAFDRVERVRDLSDEALARRIRADEIDILVDLNGLTEGTRLGALRWRPAPVQVTYLGYV 405
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP--VCPTPALTNG 356
+ +P +DY I D P + + +P + E GP L
Sbjct: 406 GSMPIPELDYAIADRYVVPEALAHDFYPQPLYMPRVYQANDTQAEIGPEETRADVGLPED 465
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCK-PFCCDSVRHRFLSTLEQLGLE 415
+ F+N KIT ++ + W IL V NS L V + P+ S+R E G++
Sbjct: 466 RFIYCCFSNTYKITEEIFEAWMSILRRVENSVLWVLARNPWAQASMRRH----AEARGVD 521
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ + ++ L D+ LDT+PY TT ++L MG+P VT+AG + +
Sbjct: 522 PARL-IFAAPTGPAQYLSRLRLADLFLDTYPYNSGTTASDALRMGLPMVTLAGRTFSSRM 580
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
SLL +VGL +A+ D+Y+ +A +L + A +R SL + + + D F
Sbjct: 581 AGSLLHQVGLGACVAETLDDYINIAARLGASPAAYRPVRESLAGDIWRRTLGDTAAFVHD 640
Query: 536 LESTYRNM 543
LE +R +
Sbjct: 641 LEEQFRRI 648
>gi|257092967|ref|YP_003166608.1| TPR repeat-containing protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257045491|gb|ACV34679.1| TPR repeat-containing protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 608
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 252/566 (44%), Gaps = 54/566 (9%)
Query: 16 MAIVFYE--LAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
+A + Y+ L +PH A NLG + L A E Y+ A+++ P F Q NLG
Sbjct: 38 LAAILYQTWLRRTRSPHAHLAYFNLGATLTNLGELTSAEEAYRQAIALSPGFIQPRLNLG 97
Query: 74 VVYTVQGKMDAAAE---MIEKAIAANPTYAEAYN-----------NLGVLYRDAG---SI 116
++ G + A E IE+ + A+ +A + YRDA S
Sbjct: 98 LLLERMGSPEKAVEEWRWIERNVPADTPEQKALLILALNNLGRALEISKQYRDATDYLSR 157
Query: 117 SLAIDA-------------YEQC-------LKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
SLA+D+ +QC + P + LAM I + +L
Sbjct: 158 SLALDSDQPDVLHHWVFLRQKQCCWPVYLPVGDTPVALMEQSTSALAMIAITDDPAVQLA 217
Query: 157 EAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNY 216
A R K+ ++ + T R + IGY S D+ H V+ + HD +
Sbjct: 218 AARRHVDKKVLK--NAPTLAGPGPYEHRRIRIGYCSSDFCLHPVAMLMVELFELHDRDQF 275
Query: 217 KVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTA 276
+V Y + D IR R V+ +R I + +++ A ++R+D+IDIL +L G T+
Sbjct: 276 EVYGYCWSPE-DGSEIRRR--VIAAMDHFRRIQPLADEEAARLIRQDEIDILFDLQGQTS 332
Query: 277 NNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFL 336
++ M+A +PAP+Q+T++G P TTGLP ID+ I D P E + + E+ + +P+ +
Sbjct: 333 GARMNMLAFRPAPIQITYLGLPATTGLPCIDFVIADRFLIPEEERPYYSEKPLYMPDVYQ 392
Query: 337 CYTPSPEAGPVCPTP---ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVK 392
GP PT L F SFNN K TP++ W IL V S L ++
Sbjct: 393 VSDRRRAPGPT-PTRESCGLPQDAFVFCSFNNNYKYTPEMFTTWMNILRRVAGSVLWLLA 451
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
+ ++R ++ G++ R+ + + +++ Y + D+ LD+FP+ TT
Sbjct: 452 DNAWAEANLRQEAITR----GIDPARL-IFASRVAPENYLARYRVADLFLDSFPFNAGTT 506
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
++L+MG+P +T +G A + +LLT L L+ +Y + A+ L SD T
Sbjct: 507 ANDALWMGLPVLTRSGRTFASRMAGALLTACRLSELVTYTLQDYEEKAVSLGSDRTDCLR 566
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLES 538
LR L + D F LES
Sbjct: 567 LREHLASEREHGVLFDTSMFVRNLES 592
>gi|387131239|ref|YP_006294129.1| TPR domain-containing protein [Methylophaga sp. JAM7]
gi|386272528|gb|AFJ03442.1| TPR domain protein, putative component of TonB system [Methylophaga
sp. JAM7]
Length = 646
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 174/368 (47%), Gaps = 17/368 (4%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIRFREKVMK 240
+R L IGY+S D+ H+ + L HD ++VV Y S + K+D F + V
Sbjct: 251 QRRLRIGYLSSDFCNHATLHLFLGVLREHDTSRFEVVAYDHSPIAKSDNYRQLFEQTVRH 310
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+ I + + + + AA + D IDILV+L GHT +N+L ++A +PAPVQVT++G P T
Sbjct: 311 RVAI----HDMTDAQAAARIEADGIDILVDLKGHTKDNRLAILAHRPAPVQVTYLGMPRT 366
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP--EAGPVCPTP-ALTNGF 357
+G ID+ I D + P ++ + E + RLPE + C + C L
Sbjct: 367 SGADFIDFVIADPIVVPDTSRVHYSEAVCRLPESYFCTDNQRFIDTTSSCREDHGLPQEA 426
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I SFN L K+T Q W IL +P + L V + R +L G++S
Sbjct: 427 IVLCSFNQLYKVTEATWQSWLSILVRIPETVLWVLAP---SQTGRVVLQQSLVAHGIDSQ 483
Query: 418 RVDLLPLI--LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ N + MQ LM LDT Y TT ++L+ GVP V + G A V
Sbjct: 484 RLIFADRTGQAKNLERMQHADLM---LDTEIYNAHTTAVDALWAGVPIVAVKGGHFASRV 540
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
SLL GL LI N DE LA+ L+ L L+ LR+ P+ D F
Sbjct: 541 SASLLQACGLPELITHNLDEMADLAVALSRSPATLQALKQKLREQRRVQPLFDTVRFTRH 600
Query: 536 LESTYRNM 543
LE Y++M
Sbjct: 601 LEMAYQHM 608
>gi|171057695|ref|YP_001790044.1| hypothetical protein Lcho_1008 [Leptothrix cholodnii SP-6]
gi|170775140|gb|ACB33279.1| TPR repeat-containing protein [Leptothrix cholodnii SP-6]
Length = 672
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 180/371 (48%), Gaps = 15/371 (4%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
+G +S D+ H+ S+ + L + D +++ YS + T R +V+ +
Sbjct: 301 LGLISSDFHHHATSFLLVQALEHIDRSRFELHFYSGGPDDRSAT---RARVLATATRVHE 357
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
+ G +++ +R+D+I +L +L G+TA ++L +MA +PAP+QV W+GYP T+G P ID
Sbjct: 358 VRGWSTERLVEQIRQDRIGVLFDLKGYTAGHRLDVMAQRPAPLQVAWLGYPGTSGEPGID 417
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLCYTPS--PEAGPVCPTP---ALTNGFITFGS 362
Y I D + P + E + ++P CY P+ + PV + L + + S
Sbjct: 418 YLIGDPIVTPLAHQGDFTEAIAQMPH---CYQPNDGQRSRPVAWSRQRCGLPDDALVLAS 474
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN K TP+V W RIL A P + L+ P R R ++ G++ RV
Sbjct: 475 FNQSYKTTPEVFAAWCRILAAQPRA-LLWMLVPDADTQARLREVAAGH--GVDPQRVVFA 531
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P + + H D+ LDTFP +G TTT ++L+ GVP +T+ G A V SL+
Sbjct: 532 PFVDIE-SHRARLPQADLILDTFPCSGHTTTSDALWAGVPVLTLTGRNFAARVAASLVHT 590
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+GL LI + YV A++L+ A +LR L S + DG FA ++
Sbjct: 591 LGLDELICDDLATYVDRAIELSRSDAARQDLRDRLARASEASTLFDGARFATDWQALIER 650
Query: 543 MWHRYCKGDVP 553
M R G P
Sbjct: 651 MVARQDAGLPP 661
>gi|47848089|dbj|BAD21873.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
Japonica Group]
gi|47848095|dbj|BAD21878.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
Japonica Group]
Length = 953
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 146/603 (24%), Positives = 240/603 (39%), Gaps = 108/603 (17%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NLG Y E A FY+ A + NNL VIYK + N A+ CY L
Sbjct: 387 LTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCYTEVLR 446
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P + +L N G + G+++ A + +A PT AEA+ NL Y+D+G + AI
Sbjct: 447 VDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTMAEAHANLASAYKDSGHVETAI 506
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR--FMRLYSQYTSWD 177
+Y+Q L++ PD A N L + + + + + +F + ++ M + +
Sbjct: 507 VSYKQALRLRPDFPEATCNLLHTLQCVCDWENRNAMFRDVEEIIRKQIKMSVLPSVQPFH 566
Query: 178 NTKDPERPLVIGYVSPDYFTH--------SVSYFIEAPLV-------------------- 209
P P++ +S Y H + F+ P V
Sbjct: 567 AIAYPIDPMLALEISCKYAAHCSLIASRFGLPSFVHPPPVPVKAEGKHCRLRVGYVSSDF 626
Query: 210 --------------YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
HD N +V Y A+ + D +R+++ + + D+ +
Sbjct: 627 GNHPLSHLMGSVFGMHDRDNVEVFCY-ALSQNDG--TEWRQRIQSEAEHFVDVSAMTSDM 683
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ +DKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 684 IARIINQDKIQILINLNGYTKGARNEIFALQPAPIQVSYMGFPGTTGAAYIDYLVTDEFV 743
Query: 316 DPPETKQKHVEELIRLPECFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNLA 367
P + E+L+ LP C+ + PVCP G F FN L
Sbjct: 744 SPTCYSHIYSEKLVHLPHCYFVNDYKQKNRDCLDPVCPHKRSDYGLPEDKFIFACFNQLY 803
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K+ P++ W IL VPNS L + P ++ R + G+ ++ + + +
Sbjct: 804 KMDPEIFDTWCNILKRVPNSALWLLRFPAAGET---RVRAHAAARGVRPDQI-IFTDVAM 859
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH 487
++H++ SL D+ LDT
Sbjct: 860 KNEHIRRSSLADLFLDTM------------------------------------------ 877
Query: 488 LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
EY A+ LA + L L L+++ P+ D + LE Y MW+ Y
Sbjct: 878 ------KEYEDRAVDLALNPAKLQALTNKLKEVRMTCPLFDTARWVRNLERAYYKMWNLY 931
Query: 548 CKG 550
C G
Sbjct: 932 CSG 934
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG Y ++ +DM I E A +P+ AE N+ +K++ ++D A+ Y A+ ++P
Sbjct: 118 LGAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRP 177
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF + +NL YT +G+++ AA+ +A+A NP +A++NLG L + G I A + Y
Sbjct: 178 NFCDAWSNLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCY 237
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
+ L+IDP A N LA ++ G DK
Sbjct: 238 IEALRIDPQFAIAWSN--LAGLFMEAGDLDK 266
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + D+AI Y A +P EA NN+G KD +++A+ CY+ L+++
Sbjct: 321 NLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVEEAINCYRSCLALQ 380
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y + AAA + AI+ + NNL V+Y+ G+ + AI
Sbjct: 381 ANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC 440
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L++DP + +A NR
Sbjct: 441 YTEVLRVDPTAADALVNR 458
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E D A+++Y+ A P A+A N G +YK +A+ YQ A+ +
Sbjct: 253 NLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISYQRAVQAR 312
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NL +Y QG++D A +AI +P + EAYNN+G +DAG + AI+
Sbjct: 313 PDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVEEAINC 372
Query: 123 YEQCLKIDPDSRNAGQN 139
Y CL + + A N
Sbjct: 373 YRSCLALQANHPQALTN 389
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D+AI +Y A P+ +A +NL Y + L++A +C + AL+I
Sbjct: 151 NMANAWKEKGDVDLAIRYYLTAIQLRPNFCDAWSNLASAYTWKGRLNEAAQCCRQALAIN 210
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ +P +A A++NL L+ +AG + A+
Sbjct: 211 PRLVDAHSNLGNLMKAQGFIQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLY 270
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
Y++ +K+ P +A Y+N+G+
Sbjct: 271 YKEAVKLKPSFADA---------YLNQGN 290
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + + A A NP +A +NLG + K + + +A CY AL I
Sbjct: 185 NLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALRID 244
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G +D A ++A+ P++A+AY N G +Y+ G AI +
Sbjct: 245 PQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIIS 304
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDD 153
Y++ ++ PD A N LA Y +G D
Sbjct: 305 YQRAVQARPDYAMAYGN--LATIYYEQGQLD 333
>gi|425468293|ref|ZP_18847323.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389885053|emb|CCI34704.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 719
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 183/374 (48%), Gaps = 13/374 (3%)
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+P + L IGY++ H V + YH+ + + + +Y D T ++
Sbjct: 355 NPNKKLKIGYIAQTLKRHPVGLLSRWTINYHNREQFDIHLYMVNQPVDEITKQWFSNPAD 414
Query: 241 KGGIWRDIY--GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
K IY D ++ED IDILV+L T + ++A +PAP+QV W+G+
Sbjct: 415 K------IYHATADSLVTYRKIKEDNIDILVDLDSGTGAIVVQVIALKPAPIQVNWLGF- 467
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL--TNG 356
+ +GLP +DY + D P ++ + E++ RLP F+ A P L N
Sbjct: 468 DGSGLPAVDYLLADPYVLPENAQEYYQEKIWRLPNAFVAVDGFEIAVPTLRREDLGINND 527
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+ + S K P ++++ +IL +VPNS +++ +S+ F ++G+E+
Sbjct: 528 AVIYLSSQTAIKRNPAMIRLQMQILKSVPNSYFLIQGVA-DDNSLLDLFCQIAAEVGVET 586
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ +LPL + ++ D+ LDT+P+ G TTT E+L+MG+P V G + G
Sbjct: 587 NRIKMLPL-YQTETYRANLAIADVVLDTYPFNGGTTTLETLWMGIPLVVKVGQQWSSRNG 645
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EYVQ ++L D +R LR SP+ + + F L
Sbjct: 646 YTLMMNAGITEGIAWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNAKQFTRDL 705
Query: 537 ESTYRNMWHRYCKG 550
E+ YR MW+ YC+
Sbjct: 706 ENAYRQMWNIYCQS 719
>gi|408377703|ref|ZP_11175304.1| hypothetical protein QWE_08941 [Agrobacterium albertimagni AOL15]
gi|407748694|gb|EKF60209.1| hypothetical protein QWE_08941 [Agrobacterium albertimagni AOL15]
Length = 679
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 154/605 (25%), Positives = 251/605 (41%), Gaps = 74/605 (12%)
Query: 13 KFDMAIVFYELAFHFN---PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL 69
+F ++ Y+ FN P A N V K + A+ + AL +P Q+
Sbjct: 46 QFALSAELYKTWTAFNDQSPLLHLAFFNYSVTLKQLGDSAGAINALKAALKAQPMMGQAH 105
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE-----------AYNNLGVLYRDAGSISL 118
NLG Y G A+ I++ + + AE A ++G + AG +
Sbjct: 106 INLGRTYEDCG---LGAQAIQQWRSYVESTAEITPDKSVHRLMALQHIGRVMEGAGLLED 162
Query: 119 AIDAYEQCLKIDPDSRNAGQNRL------------LAMNYINEGH--------------D 152
A A Q +++ PD AGQ+ + Y+ + D
Sbjct: 163 AETALWQAIELRPDKPEAGQHWISVRQHQCKWPVVQGSEYVTKRQMLDSISPLPLACYAD 222
Query: 153 DKLFEAHRDWGKRFMRLYSQYTSWDNTKDP--------ERPLVIGYVSPDYFTHSVSYFI 204
D L++ + R+ ++ + + P + L IGYVS D H+V + +
Sbjct: 223 DPLYQMAK--AHRYFKMLAGRPDAAHLNKPVPRKKVDTGQRLRIGYVSSDLRDHAVGFAL 280
Query: 205 EAPLVYHDYQNYKVVVY--SAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
L HD + +V Y DA R + + +WRDI + + A +
Sbjct: 281 SEVLELHDKTSVEVYAYYIGEPRTNDATQNRMKAVI----DVWRDITALSDLDAAKQIMA 336
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
D+ID+L+++ G+T + + + +PAPV V + GYP T P Y I D PP +
Sbjct: 337 DEIDVLIDVNGYTKLARTKIFSYRPAPVIVNFCGYPGTMASPVHQYIIADEQIIPPGNEL 396
Query: 323 KHVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITFGSFNNLAKITPKVLQVW 377
+ E+++ +P C P + P P L F FN + KIT + W
Sbjct: 397 YYTEKVLHIP----CNQPVDRKRAIGPRPTRSEVGLPEDAFVFACFNGMQKITGPMFARW 452
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
IL A P S L + D+V R + G++ R+ + N +H+ ++
Sbjct: 453 MAILTATPGSILWLLGG---SDAVNQRLRDLAKSAGVDPARLYFASKVP-NPNHLARIAI 508
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
D+ LDTFPY +T ++L MG+P +T+ G A S++ G+ LI + D+YV
Sbjct: 509 ADLFLDTFPYGAHSTASDALTMGLPVLTLPGKSFASRFCSSIVKSAGIPELICASPDDYV 568
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD--VPSL 555
+ A+ LA+D T L+ +R SL+ + D LE Y M +G+ VP L
Sbjct: 569 RKAVALANDKTELSRIRSSLQAQRETCALRDIPRLVRRLEELYWQMQGERERGETPVPDL 628
Query: 556 KRMEM 560
MEM
Sbjct: 629 SNMEM 633
>gi|417861444|ref|ZP_12506499.1| hypothetical protein Agau_L101243 [Agrobacterium tumefaciens F2]
gi|338821848|gb|EGP55817.1| hypothetical protein Agau_L101243 [Agrobacterium tumefaciens F2]
Length = 685
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 152/585 (25%), Positives = 243/585 (41%), Gaps = 71/585 (12%)
Query: 23 LAFHFN-PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81
+AF+ N P A N V+ + AV+ ++ L P F+ NLG V G
Sbjct: 59 VAFNDNSPAIHLAYFNYAVVLSQGGDPAGAVQAFRACLKASPEFAPGHINLGRVLEDAGL 118
Query: 82 MDAAAEMIEK-AIAANPTYAEA-------YNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+ A E + A A + AEA N+G + AG A +A Q ++ P+S
Sbjct: 119 IGQAVEQWSQYAAATHHIDAEAVGHRHMILQNIGRVLEGAGKFEEAENALLQAFELRPES 178
Query: 134 RNAGQ------------------NRLLAMNYINEGH--------DDKLFEAHRDWG---- 163
AGQ N L I+ DD +F+ + +
Sbjct: 179 PEAGQHWASLRQRQCKWPVLAPSNHLAPRKMIDAISSLTLSCYADDPMFQLAKAYRFSKT 238
Query: 164 --------KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQN 215
RF R + S + L +GY+S D H+V + + L HD +
Sbjct: 239 LVGACPDLSRFPRRSPKQKSGTGQR-----LRVGYLSSDLRDHAVGFALCEVLELHDKNS 293
Query: 216 YKVVVY--SAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+V Y V D+ R + V WRDI G+D+ A+ + D+IDIL+++ G
Sbjct: 294 LEVFAYYCGNVRNTDSTQERIKAAVH----CWRDINGLDDATAASQIISDEIDILIDVNG 349
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
+T + + + A +PAPV V++ GYP +TG P Y I+D P E + + E+++R+
Sbjct: 350 YTKDARAKIFAYRPAPVIVSFCGYPGSTGSPFHQYLISDGYMIPEENEIYYSEKVLRI-- 407
Query: 334 CFLCYTPSPEAGPVCPTPA-----LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
C P + P+ L + SFN + KIT W IL P S
Sbjct: 408 --ACDQPLDRKRSIAARPSRAEVGLPEDAFVYASFNGMQKITENCFARWMTILSQTPGSL 465
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L + D V R E+ G+ R+ P + N H+ + D+ LDTFPY
Sbjct: 466 LWLLTGD---DDVNQRLRDVAEKSGVAPERLVFAPKV-QNPQHIARIGVADLFLDTFPYG 521
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
+T +++ G+P +TM+G A S++T G+ ++ + ++YV A+ D
Sbjct: 522 AHSTAADAITSGLPVLTMSGKTFAARFCGSIVTAAGVPEMLCSSPEDYVARAIGFERDRK 581
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+L +R S+ S + D A LE + M +G+ P
Sbjct: 582 SLLEVRESIARQRETSVLRDIPALARRLEDLFWQMQGECERGETP 626
>gi|420241336|ref|ZP_14745477.1| hypothetical protein PMI07_03260 [Rhizobium sp. CF080]
gi|398071470|gb|EJL62724.1| hypothetical protein PMI07_03260 [Rhizobium sp. CF080]
Length = 646
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 180/367 (49%), Gaps = 18/367 (4%)
Query: 186 LVIGYVSPDYFT-HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK--G 242
L +GY+S D +T H+V + L HD + + ++ A A+ +R +++ G
Sbjct: 259 LRVGYLSADLWTEHAVMKALRGILESHDKSRFDITLF---CNAPAERLRNDNNAIREEWG 315
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+ R I G+ + + A ++ + IDILV+L GHTA N++ +M Q APV TW+GYP T
Sbjct: 316 RVVR-IRGMTDDEAAEAIKAENIDILVDLQGHTAENRVFVMNRQTAPVHATWLGYPGTVV 374
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYT------PSPEAGPVCPTPALTNG 356
IDY I DS P + + E+++ +PE F P P +C P +
Sbjct: 375 NVDIDYLIADSTVVPESSFPNYYEKVVWMPETFFPNEAVHRPMPQPIDRSLCDMP--QDA 432
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
FI F F++ K TP + +W R+L P S L + C+ R + + G+
Sbjct: 433 FI-FSCFHSHWKFTPATIDLWVRVLKETPESYLFLICRERF--GARKNLIKAFVEAGIPE 489
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ + ++ L D+ LDT+PY G TTT E L+ G+P +T G A V
Sbjct: 490 SRLIFGDRVNNYAAYINRIGLTDLGLDTYPYNGHTTTSEKLWAGLPMLTHKGKNFASRVS 549
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
SLL +GL ++A+++D++V+ A+ ++ L +R L P+ D + + L
Sbjct: 550 ESLLNALGLPEMVAEDQDDFVRRAVHYYNNREELKEVRTRLEANRFTHPLFDAERYCRHL 609
Query: 537 ESTYRNM 543
E+ Y M
Sbjct: 610 ETAYTMM 616
>gi|86138806|ref|ZP_01057378.1| Glycosyl transferase group 1:TPR repeat [Roseobacter sp. MED193]
gi|85824453|gb|EAQ44656.1| Glycosyl transferase group 1:TPR repeat [Roseobacter sp. MED193]
Length = 629
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 234/514 (45%), Gaps = 26/514 (5%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+A++ +AL+++P ++L ++G GK A + A+ +P A +NL L
Sbjct: 115 EAIKYLSLALALEPKNVETLVSIGNALENWGKPHDAIGFYQAALGIDPKNLAAISNLIHL 174
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA------MNYINEGHDDKLFEAHRDWG 163
S E ++ LLA M+ +N D+L + +
Sbjct: 175 SMAESDWSFFPKLPEMLKTLNLGKSFGNPFNLLAVTDDPAMHRVNLAERDRLLKKNVLKN 234
Query: 164 KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA 223
++F ++ T+ D + IGY S D+ +H+ + + HD ++V +Y
Sbjct: 235 EKFP---AKGTAGDKIR-------IGYFSSDFHSHATMFLLGKFFENHDRDRFEVYLYD- 283
Query: 224 VVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMM 283
++ ++ + RE V + + + +K+VA R D +DI V++ G T ++ +
Sbjct: 284 -LQRPEESAKARE-VRDAADHYVPVATLTDKEVAERARADGLDIAVDMKGFTKGSRPVIF 341
Query: 284 ACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPS-- 341
+ AP+QV+++G+P TTG+ +DY + D++ P ++ VE+++ +P+C+ +
Sbjct: 342 GHRAAPIQVSYLGFPGTTGISAMDYFLADNVTVPANKRRFFVEKIMYMPDCYQVNDNTRS 401
Query: 342 -PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS 400
P+A P L F S NN K+TP +W R+L AVP+S L + D
Sbjct: 402 HPDAIPTRTELGLPEDKFVFCSLNNSYKVTPVEYDIWMRLLHAVPDSVLWLLA---ANDY 458
Query: 401 VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG 460
V+ + G+ R+ + H+ D+ LDTF TT E+L+ G
Sbjct: 459 VQKNLIDEAAARGIGPERLFFAGRVSTTA-HLARLPQADLFLDTFNCCAHTTASETLWSG 517
Query: 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDL 520
VP +T G A V S+LT +G + LI + + Y LAL+LA D ALA ++ L+D
Sbjct: 518 VPLITKPGDQFASRVAASILTAIGCEDLITDSAENYYDLALKLAQDPKALAEIKQRLKDN 577
Query: 521 MSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
+ +P+ D + + E+ R G P
Sbjct: 578 LWTTPLYDSEAYIRNFENLMEKAVERQRSGKAPG 611
>gi|428227087|ref|YP_007111184.1| hypothetical protein GEI7407_3665 [Geitlerinema sp. PCC 7407]
gi|427986988|gb|AFY68132.1| TPR repeat-containing protein [Geitlerinema sp. PCC 7407]
Length = 746
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 190/381 (49%), Gaps = 8/381 (2%)
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
T ++ L +GY+S + +HSV + YH+ + K Y V +DA R+
Sbjct: 370 TATSDQELKVGYISHCFNSHSVGWLARWLFRYHNPERIKTYGY-FVNFSDAVEDSLRDWY 428
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ R + + ++A + ED+IDILV+L T + +M+ +PAP+QV+W+G+
Sbjct: 429 VDNINHVRKMSS-NAVEIADQINEDQIDILVDLDSLTLDITCEVMSLKPAPIQVSWLGW- 486
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL--TNG 356
+ +G+P+IDY + D P E + + E++ RLP+ FL A P L +
Sbjct: 487 DASGIPSIDYFLADPYILPTEAEDYYAEKIWRLPQTFLGIDGFEVAVPTLKREDLGISTD 546
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS-VRHRFLSTLEQLGLE 415
+ + S K P +++ ++L VPNS L++K + +S ++ F + G++
Sbjct: 547 AVIYLSAQTGIKRNPDTVRLQMKVLAQVPNSYLLIKG--WADESALQQSFKQIASEEGVD 604
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
S R+ LP++ H + D+ LDT+PY G TTT E+L+M VP VT G +
Sbjct: 605 SERLRFLPIVPSEATHRANMGIADVILDTYPYNGATTTMEALWMCVPIVTKVGQQFSARN 664
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
S++ G++ IA +++EY++ + L D + L+ SP+ G+ F
Sbjct: 665 SYSMMMNAGIQEGIAWSDEEYIRWGVTLGRDAKLRQEISHRLKLSRQTSPLWSGKRFTQS 724
Query: 536 LESTYRNMWHRYCKGDVPSLK 556
+E Y+ MW Y +G P ++
Sbjct: 725 IEEAYQKMWEIYLEGRSPQVQ 745
>gi|220906369|ref|YP_002481680.1| hypothetical protein Cyan7425_0933 [Cyanothece sp. PCC 7425]
gi|219862980|gb|ACL43319.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425]
Length = 738
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 244/564 (43%), Gaps = 65/564 (11%)
Query: 16 MAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK-PNFSQSLNNLGV 74
MA+ + EL +P N + +Y+ ++ +A+ + A + Q +
Sbjct: 214 MAVKYGELCLRLDPDSLPTVNLMASLYQGINDYSQALTMARQADRLSHSRLDQIFTKHLL 273
Query: 75 VYTVQGKMDAAAE----------MIEKAIAANPTYAEAYN-----NLGVLYRDAGSISLA 119
+ T+ G AE +I+ AA PT + +LG L+
Sbjct: 274 LLTLMGSGSHWAEVELLFSQLQNLIKDFCAAPPTPISRHELVFLPSLGFLF--------- 324
Query: 120 IDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNT 179
P R+ Q MN + + L + D +R+ Q T +
Sbjct: 325 -----------PHFRDYPQTDRPLMNQLGQICCQSLTQQESDRQQRY-----QATWKTSC 368
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
++P+RPL IGY+S + TH V + L +HD ++ +Y + ++ KV
Sbjct: 369 REPDRPLKIGYLSSCFRTHPVGFLARGLLQHHDCHQFQPHLY---------FVSYKSKVF 419
Query: 240 KKGGIWRDIYGI-------DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
W + G D ++A + D IDIL++L T ++ +A +PAP+Q
Sbjct: 420 DPIQHWYESQGFPVFKAAKDGLEIAEQIHRDGIDILIDLDSITIQTEI--LALKPAPIQA 477
Query: 293 TWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA 352
TW+G+ + G P +DY I D P + + + E++ RLP+ +L P
Sbjct: 478 TWLGF-DAAGCPAVDYFIADPYVLPEQAQAYYGEKIWRLPQTYLAIDGLEVGLPTLRRED 536
Query: 353 L---TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
L + + F S K P ++++ +IL AVP S ++K + +V+ FL
Sbjct: 537 LGIPADAPVYFSSQRG-NKRNPHLIRLQMQILKAVPGSYFLIKGQSDQA-AVQEVFLQMA 594
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
E G+ R+ PL+ +H + +I LDT+PY G TTT E+L+M VP VT+ G
Sbjct: 595 EAEGISVDRLKFPPLVNTCEEHRANLRIANIILDTYPYNGATTTLEALWMEVPVVTLVGQ 654
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
+ + L+ G+ IA ++ EYV+ ++L D + + L+ ++P+ D
Sbjct: 655 QFSARNSYTFLSNAGVTEGIAWSDAEYVEWGVRLGQDQALRDRISLKLKAAKQRAPLWDA 714
Query: 530 QNFALGLESTYRNMWHRYCKGDVP 553
+ F +E+ Y++MW Y +P
Sbjct: 715 RKFTREMETAYQSMWKTYLDTLLP 738
>gi|222084872|ref|YP_002543401.1| glycosyltransferase domain-containing protein [Agrobacterium
radiobacter K84]
gi|221722320|gb|ACM25476.1| glycosyltransferase TPR domain protein [Agrobacterium radiobacter
K84]
Length = 673
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 182/383 (47%), Gaps = 27/383 (7%)
Query: 188 IGYVSPDYFT-HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D++ H+ ++ L HD +++ ++ + + R E + G
Sbjct: 283 IGYLSSDFWPGHATMKLLQRILELHDRNRFEITLFD---HSSLTSQREEEFDYSRWGAMV 339
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
DI + ++ A ++R IDILV+L GHT +++ ++ AP+Q +W+G+P +T +
Sbjct: 340 DIRSLTDQAAAEVIRARDIDILVDLKGHTKDSRARILNHMAAPIQTSWLGFPGSTVNIDL 399
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLC----YTPSPEAGPVCPTPALTNGF----I 358
DY I D P ++K E+ RLPE + Y P P PT +G
Sbjct: 400 DYIIGDPYVLPEQSKPHFHEKFCRLPESYQANDPIYRPKPR-----PTTRAQHGLPEDAF 454
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
F SFN KIT +++ VW IL NS L + C ++ + LE G+ R
Sbjct: 455 VFASFNGNRKITSQMVDVWCNILKRTKNSVLWLLCNGPRAEA---NLWARLEARGVNRKR 511
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
V I DH+ L D+ LDTFP G TTT E L+ G+P +TM G+ A V S
Sbjct: 512 VVFTTRIRYE-DHIDRQQLADLGLDTFPVNGHTTTSEQLWGGLPVLTMKGTNFASRVSES 570
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
LL +G+ L+A + Y +A++ A + +A L+ L P+ D + F LE+
Sbjct: 571 LLNAIGVPELVAADVQAYENMAVEFAGEPERVARLKDVLAANRYIKPLFDAERFTSHLET 630
Query: 539 TYRNMWHRYCKG------DVPSL 555
Y M R +G DVP+L
Sbjct: 631 AYAMMVERAKQGLAPDHMDVPAL 653
>gi|398379826|ref|ZP_10537946.1| hypothetical protein PMI03_03578 [Rhizobium sp. AP16]
gi|397722458|gb|EJK83002.1| hypothetical protein PMI03_03578 [Rhizobium sp. AP16]
Length = 647
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 182/383 (47%), Gaps = 27/383 (7%)
Query: 188 IGYVSPDYFT-HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D++ H+ ++ L HD +++ ++ + + R E + G
Sbjct: 257 IGYLSSDFWPGHATMKLLQRILELHDRNRFEITLFD---HSSLTSQREEEFDYSRWGAMV 313
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
DI + ++ A ++R IDILV+L GHT +++ ++ AP+Q +W+G+P +T +
Sbjct: 314 DIRSLTDQAAAEVIRARDIDILVDLKGHTKDSRARILNHMAAPIQTSWLGFPGSTVNIDL 373
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLC----YTPSPEAGPVCPTPALTNGF----I 358
DY I D P ++K E+ RLPE + Y P P PT +G
Sbjct: 374 DYIIGDPYVLPEQSKPHFHEKFCRLPESYQANDPIYRPKPR-----PTTRAQHGLPEDAF 428
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
F SFN KIT +++ VW IL NS L + C ++ + LE G+ R
Sbjct: 429 VFASFNGNRKITSQMVDVWCNILKRTKNSVLWLLCNGPRAEA---NLWARLEARGVNRKR 485
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
V I DH+ L D+ LDTFP G TTT E L+ G+P +TM G+ A V S
Sbjct: 486 VVFTTRIRYE-DHIDRQQLADLGLDTFPVNGHTTTSEQLWGGLPVLTMKGTNFASRVSES 544
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
LL +G+ L+A + Y +A++ A + +A L+ L P+ D + F LE+
Sbjct: 545 LLNAIGVPELVAADVQAYENMAVEFAGEPERVARLKDVLAANRYIKPLFDAERFTSHLET 604
Query: 539 TYRNMWHRYCKG------DVPSL 555
Y M R +G DVP+L
Sbjct: 605 AYAMMVERAKQGLAPDHMDVPAL 627
>gi|425445185|ref|ZP_18825221.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389734919|emb|CCI01526.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 713
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 181/374 (48%), Gaps = 11/374 (2%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
KD + L IGY++ HS+ + YHDY + V +Y + D T F+ +V
Sbjct: 348 KDANKVLKIGYIANTLGNHSIGLISRWLMKYHDYNEFHVSLYLVSQQEDFITKNCFKNQV 407
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ +D + +A + +D IDILV+L T N +MA +PAP+QVTW+G+
Sbjct: 408 NACYNL-----PMDPQIIAEKISQDNIDILVDLDSITNNTTCQVMALKPAPIQVTWLGF- 461
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NG 356
+ +G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 462 DASGIPAIDYYLADNYVLPADAQEYYREKIWRLPNSYICVDGVEVAYPSLRRDDLGIPED 521
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I + + K P+ +++ ++L AVPNS L ++ S+ F E+ G+
Sbjct: 522 AINYLTVQTGVKRNPETIRLQLQVLKAVPNSYLSIQGLS-DAKSLEKLFFKVAEEEGINY 580
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ + PL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 581 ERLKIFPLYPTGI-YRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRNS 639
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EY+ ++L D + L + SP+ + + F +
Sbjct: 640 YTLMVNAGISEGIAWSDEEYIDWGIKLGKDEQLRRKVIAKLDESRKTSPIWNARQFTKNV 699
Query: 537 ESTYRNMWHRYCKG 550
E+ YR MW YC+
Sbjct: 700 ENAYRQMWQIYCES 713
>gi|86356319|ref|YP_468211.1| glycosyltransferase domain-containing protein [Rhizobium etli CFN
42]
gi|86280421|gb|ABC89484.1| putative glycosyltransferase TPR domain protein [Rhizobium etli CFN
42]
Length = 544
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 187/397 (47%), Gaps = 27/397 (6%)
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
SQ +W N + IGY+S D++ H+ ++ L HD ++V ++
Sbjct: 153 SQPHTWSNK------IRIGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGP 203
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
+ ++ E + G DI+G ++ V A+VRE IDI+V+L GHT+ ++ AP
Sbjct: 204 EYLKHNETDRSRWGRIVDIHGFSDQAVLAVVREHNIDIMVDLKGHTSGSRATAFNQPLAP 263
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPV 347
V V W+G+P +T +DY I D P K + E+ RLPE + P P+ PV
Sbjct: 264 VHVGWLGFPGSTVNIDLDYVIGDHSVLPDVAKPFYHEKFCRLPESYQPNDPMHRPKPRPV 323
Query: 348 CPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR-- 404
L F SFN KITP+V+ W RIL PNS L + +S R++
Sbjct: 324 TREQLGLPEDAFIFASFNGNRKITPEVVNSWCRILKRAPNSVLWL-----MANSPRNQAN 378
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
+ G+ R+ P DH+ D+ +DTFP G TTT E L+ G+P +
Sbjct: 379 LSKHFQTAGISPKRIIFCPRAPYE-DHISRQQAADLGIDTFPVNGHTTTSEQLWGGLPVL 437
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
T+ G+ A V SLL + L L+A + Y LA++LA + +A + L++ +
Sbjct: 438 TVKGTNFASRVSESLLKAIDLPELVASDLQAYEDLAVELAQNPARIAEYKAHLKEQRYIA 497
Query: 525 PVCDGQNFALGLESTYRNMWHRYCKG------DVPSL 555
P+ D + F LE Y M R + D+P+L
Sbjct: 498 PLFDAERFCHHLEQAYEIMAERARQRLAPEHMDIPAL 534
>gi|417097828|ref|ZP_11959414.1| hypothetical protein RHECNPAF_1760042 [Rhizobium etli CNPAF512]
gi|327193044|gb|EGE59956.1| hypothetical protein RHECNPAF_1760042 [Rhizobium etli CNPAF512]
Length = 638
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 189/404 (46%), Gaps = 27/404 (6%)
Query: 164 KRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYS 222
+R +Q +W N + IGY+S D++ H+ ++ L HD ++V ++
Sbjct: 240 ERVASRRNQPHTWSNK------IRIGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF- 292
Query: 223 AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGM 282
+ ++ + + G DI+G ++ V A+VRE IDI+V+L GHT+ ++
Sbjct: 293 --CHTGPEYLKHNDTDRSRWGRIVDIHGFSDQAVLAIVREHNIDIMVDLKGHTSGSRAAA 350
Query: 283 MACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP-- 340
APV V W+G+P +T +DY I D P K + E+ RLPE + P
Sbjct: 351 FNQPLAPVHVGWLGFPGSTVNIDLDYVIGDHFVLPEVAKPFYHEKFCRLPESYQPNDPLH 410
Query: 341 SPEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD 399
P+ PV L F SFN KITP+V+ W RIL PNS L + +
Sbjct: 411 RPKPRPVTREQLGLPEDAFIFASFNGNRKITPEVVNSWCRILKRAPNSVLWL-----MAN 465
Query: 400 SVRHR--FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESL 457
S R++ + G+ R+ P + H+ D+ +DTFP G TTT E L
Sbjct: 466 SPRNQANLSKHFQTAGISPKRIIFCPRAPYDQ-HIDRQQAADLGIDTFPVNGHTTTSEQL 524
Query: 458 YMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSL 517
+ G+P +T G+ A V SLL + L L+A + Y LA++LA + +A + L
Sbjct: 525 WGGLPVLTFKGTNFASRVSESLLQAIDLPELVAGDLQAYEDLAVELAQNPGRIAEYKARL 584
Query: 518 RDLMSKSPVCDGQNFALGLESTYRNMWHRYCKG------DVPSL 555
++ +P+ D + F LE Y M R +G D+P+L
Sbjct: 585 KEKRYIAPLFDAERFCNHLEQAYEIMADRARQGLAPEHMDIPAL 628
>gi|227820814|ref|YP_002824784.1| hypothetical protein NGR_c02330 [Sinorhizobium fredii NGR234]
gi|227339813|gb|ACP24031.1| conserved hypothetical protein contains tetratricopeptide protein
domain [Sinorhizobium fredii NGR234]
Length = 685
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 150/579 (25%), Positives = 241/579 (41%), Gaps = 53/579 (9%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQM---- 57
+N V +M +I F P + NLG +D +A++ +Q+
Sbjct: 70 FNYSVTLRQMGDLAGSIHALRACLKFEPRFGQGHINLGRALEDAGLTGQAIQQWQVYAEA 129
Query: 58 ALSIKPNFSQS----LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
I P + L ++G V G M+ A + KAI P EA + L +
Sbjct: 130 TSEITPERAAHRLMVLQHMGRVLENAGLMEEAESTLWKAIELRPDKTEAGQHWTSLRQ-- 187
Query: 114 GSISLAIDAYEQCL--KIDPDSRNAGQNRLLAMNYINEG--HDDKLFEAHRDW------- 162
QC + P + + L A++ + DD +F+ + +
Sbjct: 188 ----------RQCKWPTLAPSEHVSARQLLDALSPLTLACYADDPVFQLAKAYRYCKSLV 237
Query: 163 GKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY- 221
G+ + + + + +R L +GYVS D H+V + + HD + ++ Y
Sbjct: 238 GRPDLSGFPKLQPRQKSGTGQR-LRVGYVSSDLRDHAVGFALSEVFETHDKSSVEIYAYY 296
Query: 222 -SAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKL 280
DA R +M WRDI I + A + D+IDILV++ G+T + +
Sbjct: 297 CGEARTGDATQTR----MMSTIDCWRDISAISDSDAAKQIIADEIDILVDVNGYTKHART 352
Query: 281 GMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP 340
+ A +PAPV V++ GYP T G P Y I D PPE + + E+++R+P C P
Sbjct: 353 RIFAYRPAPVIVSFCGYPGTMGSPFHQYVIADEQIIPPENEIYYSEKVLRIP----CNQP 408
Query: 341 SPEAGPVCPTPALT------NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCK 394
+ P P+ +GFI F FN KIT W IL A P S L +
Sbjct: 409 VDRKRQIAPRPSRAEAGLPEDGFI-FACFNGAQKITAACFDRWMAILAATPGSCLWLLGG 467
Query: 395 PFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTC 454
+ V R +Q G+ R+ + N H+ L D+ LDTFPY +T
Sbjct: 468 ---GEDVDQRLKQAAQQRGVAPERL-IFASKAPNPKHLARIGLADLFLDTFPYGAHSTAG 523
Query: 455 ESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLR 514
++L MG+P +T G+ A S++ G+ LI + D++V+ A+ A D +LA++R
Sbjct: 524 DALTMGLPVLTFPGNGFASRFCSSIVAAAGVPELICEGPDDFVRKAIGFAKDRQSLASVR 583
Query: 515 MSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+L S + D LE M +G+ P
Sbjct: 584 EALESRRDASVLRDIPALVRRLEELLWQMQGECERGETP 622
>gi|445499833|ref|ZP_21466688.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase [Janthinobacterium sp.
HH01]
gi|444789828|gb|ELX11376.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase [Janthinobacterium sp.
HH01]
Length = 1058
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 150/574 (26%), Positives = 252/574 (43%), Gaps = 63/574 (10%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMAL-- 59
+NLG A Y +P E NLG + + + ++A+ ++ L
Sbjct: 63 FNLGALLAADSDDAGAEAAYRKCIALHPRFVEGRLNLGTLLERQGQPEEALAMWRTILGP 122
Query: 60 -------SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN---------------- 96
+ + + Q+LNNLG + +Q + A M+ +++
Sbjct: 123 AVKIDQKASRTQYLQTLNNLGRLLEIQKQYPEAEAMLAQSLVVEPDQPHVMTHWVHLRQK 182
Query: 97 ----PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152
PT+A ++ + G+ +LA+ L DP + A R +A E D
Sbjct: 183 QCHWPTWA-GLPHISRKQMEDGASALAM----LSLTDDPALQAAAAARFVA-----EKID 232
Query: 153 DKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHD 212
+ Q +S+ + + L +GY+S D +H+VS HD
Sbjct: 233 TSV--------ASLTGAAGQGSSYGHER-----LRVGYLSSDLCSHAVSILTAELYGLHD 279
Query: 213 YQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELT 272
++V +S + D +R R K I I+ + +++ A ++R +IDILV+L
Sbjct: 280 RGQFEVYAFS-WSREDGSPLRARVKAGMDHYI--AIHALSDQQAAQLIRSHEIDILVDLH 336
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G T+ + ++A +PAPVQ+TW+G+P TTGLP IDY I D E ++ E+ + LP
Sbjct: 337 GLTSGARPQILAYRPAPVQMTWLGFPGTTGLPGIDYVIADEFLITQEMRKDFTEQPLYLP 396
Query: 333 ECFLCYTPSPEAG--PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL- 389
+ F G P + L F SFNN K P++ W IL VP S L
Sbjct: 397 DTFQINDRQRLIGNKPTRASVKLPEHAFVFCSFNNSYKFKPELFAHWMNILRRVPGSVLW 456
Query: 390 VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAG 449
+V P D+++ + G++S R+ + L D++ Y L D+ LDT+P+
Sbjct: 457 LVADTPLVADNLKRH----AAEAGIDSDRL-IFAERALPADYLARYQLADLFLDTYPFNA 511
Query: 450 TTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTA 509
TT ++L+ G+P +T AG A + SLL V L LI N +Y + A+ LA+D +
Sbjct: 512 GTTASDALWAGLPLLTCAGPTFASRMAGSLLRAVDLPQLITYNFADYEEQAVALANDPAS 571
Query: 510 LANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
+A ++ L D + + D LE+ + +
Sbjct: 572 IAAMKRQLIDNRMRCALFDTPRLVRNLEAAMQRV 605
>gi|425464282|ref|ZP_18843604.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389833752|emb|CCI21473.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 719
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 182/371 (49%), Gaps = 13/371 (3%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
+ L IGY+S H V + YH+ + + + +Y D T ++ K
Sbjct: 358 KKLKIGYMSQSLKRHPVGLLSRWTINYHNREQFDIHLYMVSQPVDEITQQWFSNPADK-- 415
Query: 244 IWRDIYGIDEKKVAAM--VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
IY +A ++ED IDILV+L T ++A +PAP+QV W+G+ + +
Sbjct: 416 ----IYHATADSLATYRKIKEDNIDILVDLDSGTGAIVAPVIALKPAPIQVNWLGF-DGS 470
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL--TNGFIT 359
GLP +DY + D P ++ + E++ RLP+ F+ A P L N +
Sbjct: 471 GLPAVDYLLADPYVLPENAQEYYQEKIWRLPDAFVAVDGFEIAVPTLRREDLGINNDAVI 530
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
+ S K P ++++ +I+ +VPNS +++ +S+ F ++G+E+ R+
Sbjct: 531 YLSSQTAIKRNPAMIRLQMQIIKSVPNSYFLIQGVA-DDNSLLDLFCQIAAEVGVETNRI 589
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+LPL + ++ D+ LDT+P+ G TTT E+L+MG+P V G + G +L
Sbjct: 590 KMLPL-YQTETYRANLAIADVVLDTYPFNGGTTTLETLWMGIPLVVKVGQQWSSRNGYTL 648
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+ G+ IA +++EYVQ ++L D +R LR SP+ + + F LE+
Sbjct: 649 MMNAGITEGIAWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNAKQFTRDLETA 708
Query: 540 YRNMWHRYCKG 550
YR MW+ YC+
Sbjct: 709 YRQMWNIYCQS 719
>gi|23016729|ref|ZP_00056482.1| COG3914: Predicted O-linked N-acetylglucosamine transferase,
SPINDLY family [Magnetospirillum magnetotacticum MS-1]
Length = 686
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 178/382 (46%), Gaps = 25/382 (6%)
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P+R + IGY+S + H+ Y HD Q ++V YS + R + ++MK
Sbjct: 246 PKRRIRIGYLSSYFREHAHGYLTAEMYKLHDRQRFEVYAYSCSRRTGD---RIQTQLMKD 302
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+ DI ++++ VA ++ D IDIL++ G+T + +MA +PAP+ V W+GYP +
Sbjct: 303 VDHFVDILDMNDEDVAKRIQADGIDILIDFNGYTGEARPAIMAMRPAPIAVNWLGYPGSM 362
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC------PTPALTN 355
G P DY I D P + + + E+++RLP CY P+ V L
Sbjct: 363 GTPYHDYVIADDFTIPKDFEIYYSEKVVRLP----CYQPNDRQRVVANINWTREAAGLPA 418
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
F FN L KIT + + IL VPN L + + + R + G+
Sbjct: 419 NATVFCGFNGLQKITAPMWARFMDILSRVPNGVLWLLDG---GERINERLRQEAIKHGVT 475
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ P L+N +H+ Y L D+ LDT P TT +SL+MGVP +T+AG A V
Sbjct: 476 PDRIIFAPK-LINAEHLSRYPLADLFLDTSPCGAHTTASDSLWMGVPVLTVAGRGFASRV 534
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRD-LMSKSPVC---DGQN 531
SL GL L+ +EYV+ A++L +D R ++RD L + C D
Sbjct: 535 CGSLAVAAGLSDLVCTTFEEYVEKAVELGND----KRRRQAVRDRLAANRDTCDLFDTDK 590
Query: 532 FALGLESTYRNMWHRYCKGDVP 553
L+ +MW + VP
Sbjct: 591 LVRHLDGLLESMWEDFVADRVP 612
>gi|448747260|ref|ZP_21728921.1| Tetratricopeptide-like helical [Halomonas titanicae BH1]
gi|445565172|gb|ELY21284.1| Tetratricopeptide-like helical [Halomonas titanicae BH1]
Length = 437
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 178/353 (50%), Gaps = 11/353 (3%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
+ A++F A NP+ A+A + +G IY + ++A++ ++A + P+ LN LG
Sbjct: 92 EQALIFLHDAIKLNPNYAKAQHYIGYIYYTQARFNEALQHAEIACELVPDDVDMLNTLGN 151
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134
+ + A + +EKA P ++NNLG +Y G + +++Y Q +++P +
Sbjct: 152 TLMQAFEYNRAKDALEKAARLAPKNYLSWNNLGNVYNAIGDLDKGLESYWQAHRVNPQAP 211
Query: 135 NAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTS--WDNTKDPERPLVIGYVS 192
N + +Y E ++ + W +F+ S T+ N DP++ L +G +S
Sbjct: 212 GPFSNIITTYHYHPEKTGKEITALCKKWESKFL---SSVTALPLSNLNDPQKRLRVGLIS 268
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
+ H V I + L + YS +D T R + + W + +
Sbjct: 269 DGFRGHPVGRMITSALEHVSKSQIAFYFYSTNNASDGITERLKSVAEQ----WMSVQPLK 324
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI-GYPNTTGLPTIDYRIT 311
+++VA + D IDIL++L GH A N++ ++ QPAPVQV W+ G NTTGL IDY I+
Sbjct: 325 DQQVAEQIVNDGIDILIDLAGHNAGNRVLAVSMQPAPVQVKWVGGLINTTGLSAIDYLIS 384
Query: 312 DSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP-VCPTPALTNGFITFGSF 363
DS+ P + +VE+LIRLP+ ++CY P P V PA+ NG+IT F
Sbjct: 385 DSIETPENVDEDYVEKLIRLPDDYICYVPPNGYEPNVGVLPAIRNGYITARLF 437
>gi|332526962|ref|ZP_08403051.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2]
gi|332111401|gb|EGJ11384.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2]
Length = 622
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 185/373 (49%), Gaps = 15/373 (4%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GY++ D +H+ + + D + ++V+VYS D ++ R +V+ +
Sbjct: 248 LRVGYLTADICSHATAVLMAEFFERCDRERFEVLVYSH--SPDDQSA-LRARVIAACDRF 304
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
D+ + ++++A + D +DI V+L GHTA+ + ++A +PAPVQV ++GYP TTG
Sbjct: 305 VDVNSMTDQQIAQRMHADGVDIAVDLKGHTADTRYAVLAHRPAPVQVAFLGYPGTTGADF 364
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG--PVCPT---PALTNGFITF 360
IDY I D + P E E++ +LP Y P+ P CP+ L G F
Sbjct: 365 IDYVIGDPVVTPLEHAPHFSEKIAQLP---WSYQPNDRNRVLPPCPSRREEGLPEGATVF 421
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
FN K+ P +L +WARIL VP+S V+ + + R+ L+ L G+ RV
Sbjct: 422 CCFNQSYKLNPAMLDLWARILAQVPDS--VLWLLEWNGQAPRN-LLAELAARGIARERVV 478
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ + DH+ D+ LDT+P TT E+L+ GVP +T+ G A V SLL
Sbjct: 479 FGKRVSIE-DHLARLQCADLFLDTWPCNAHTTASEALWAGVPVLTVPGQTFASRVAASLL 537
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
L L+ + D YV LA+ LA D + L L+ LR+ P+ D +A ++
Sbjct: 538 HACELDELVCGDGDAYVDLAVGLARDRSRLQALQRHLRERRLTLPLFDTARYAADFDALL 597
Query: 541 RNMWHRYCKGDVP 553
M R +G P
Sbjct: 598 LRMAERERQGLPP 610
>gi|332711804|ref|ZP_08431735.1| glycosyltransferase involved in cell wall biogenesis [Moorea
producens 3L]
gi|332349782|gb|EGJ29391.1| glycosyltransferase involved in cell wall biogenesis [Moorea
producens 3L]
Length = 1427
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 151/592 (25%), Positives = 261/592 (44%), Gaps = 84/592 (14%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG K D A Y+ A C +A NNLG +++ + LD A E YQ A+ +K
Sbjct: 164 NLGNVLQVQGKLDAARESYQEAIKLKADCFQAHNNLGTLFQTQGKLDAARESYQEAIRLK 223
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NNLG + QGK++ A + ++AI P +AE YNNLG + + A+ +
Sbjct: 224 PDYADAHNNLGTILQKQGKLEEAVQSYQEAIRLKPDFAEVYNNLGNTLHEQCKLEEALQS 283
Query: 123 YEQCLKIDPD-------------------------SRNAGQNRL--LAMNYIN------- 148
Y+Q L I+P+ +RN Q L LA +Y
Sbjct: 284 YQQALSINPNLAEAKLAMCVCQIPIIYSSVDEIKVTRNNYQGSLKKLADSYTQSDTELSP 343
Query: 149 --------------------EGHDDKLFEAHRDWGKRFMRLYSQ-YTSWDN-----TKDP 182
+G +++ E +G+ ++ SQ Y W P
Sbjct: 344 RELLSAANAVGAFQPFYLAYQGLNNR--ELQEIYGQMICQIMSQCYPRWSQKIPLPNLAP 401
Query: 183 ERPLVIGYVSPDYFTHSVSYF-IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
+ IG +S ++ HS I+ + D N+++ Y +K D +T + +K
Sbjct: 402 HEKVRIGVISEFFWDHSNWKIPIKGWVENLDRSNFELFGYHTGLKQDKETAIAAKSFVK- 460
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILV--ELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
+ + I+E ++ EDK+ IL+ E KLG + AP+Q+T G+P+
Sbjct: 461 --FVQGSFTIEE--WCEVITEDKLHILIFPEFGMSPTTVKLGCLRL--APIQMTSWGHPD 514
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP---SPEAGPVCPTPALTNG 356
T+G+PTIDY ++ L + + + E L+RLP + YTP +PEA L +
Sbjct: 515 TSGMPTIDYYLSSDLMEAENAQDHYSERLVRLPNLSIHYTPLEITPEA-IAKKDIGLDDD 573
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV----RHRFLSTLEQL 412
I F +L K P V+ RI + + V K D V R +
Sbjct: 574 EIMFWCCQSLYKYLPDYDDVFPRIAKELAHRCKFVFIKYVKSDRVTEIFEQRLRDAFNKF 633
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
GL+ + + N ++ D+ LD+ ++G ++ ES+ +P VT+ G +
Sbjct: 634 GLDYTDYCIFLPFMNNRRFAGTSAIADVFLDSIGWSGCNSSLESIAHNIPMVTLPGDLMR 693
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
+++L +GL+ IA ++++YV++A++L D A R + D ++++
Sbjct: 694 GRHTMAILKMMGLEETIASSKEDYVKIAVRLGQD----AQYRQYISDQVAEN 741
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 82/137 (59%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + D A+ +Y+ A P A A NNLG + ++ L +AV CYQ A+ +K
Sbjct: 96 NLGNIFWAKGELDKAVQYYQEAIKVKPDYAVAHNNLGNLLHNQGKLGEAVHCYQEAIRVK 155
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++Q+ NLG V VQGK+DAA E ++AI +A+NNLG L++ G + A ++
Sbjct: 156 PDYAQAYCNLGNVLQVQGKLDAARESYQEAIKLKADCFQAHNNLGTLFQTQGKLDAARES 215
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ +++ PD +A N
Sbjct: 216 YQEAIRLKPDYADAHNN 232
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 2/159 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N + E K + A+ Y+ A P AE NNLG I+ + LDKAV+ YQ A+ +K
Sbjct: 62 NFASIFEEKNKLEEAVALYQQALTLKPDFAEVHNNLGNIFWAKGELDKAVQYYQEAIKVK 121
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+++ + NNLG + QGK+ A ++AI P YA+AY NLG + + G + A ++
Sbjct: 122 PDYAVAHNNLGNLLHNQGKLGEAVHCYQEAIRVKPDYAQAYCNLGNVLQVQGKLDAARES 181
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161
Y++ +K+ D A N L + +G D E++++
Sbjct: 182 YQEAIKLKADCFQAHNN--LGTLFQTQGKLDAARESYQE 218
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG K A+ Y+ A P A+A NLG + + + LD A E YQ A+ +K
Sbjct: 130 NLGNLLHNQGKLGEAVHCYQEAIRVKPDYAQAYCNLGNVLQVQGKLDAARESYQEAIKLK 189
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
+ Q+ NNLG ++ QGK+DAA E ++AI P YA+A+NNLG + + G + A+ +
Sbjct: 190 ADCFQAHNNLGTLFQTQGKLDAARESYQEAIRLKPDYADAHNNLGTILQKQGKLEEAVQS 249
Query: 123 YEQCLKIDPD 132
Y++ +++ PD
Sbjct: 250 YQEAIRLKPD 259
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 68/110 (61%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P+ A N I+++++ L++AV YQ AL++KP+F++ NNLG ++ +G++D A
Sbjct: 52 LKPYNVIAIANFASIFEEKNKLEEAVALYQQALTLKPDFAEVHNNLGNIFWAKGELDKAV 111
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
+ ++AI P YA A+NNLG L + G + A+ Y++ +++ PD A
Sbjct: 112 QYYQEAIKVKPDYAVAHNNLGNLLHNQGKLGEAVHCYQEAIRVKPDYAQA 161
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 25/152 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLG----------------------- 39
NLG A + +D AI Y+ A P C EA NLG
Sbjct: 881 NLGYALQQQGNWDDAIASYQQALEIEPTCTEADVNLGNALHAQEKLALEKQAHYAQLNHE 940
Query: 40 --VIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
V + +L AV Y+ A++++ + + NLGVV QG+ + A +K + NP
Sbjct: 941 LGVTRQKAGDLTNAVAYYRQAVAMQSDLVSAHYNLGVVLQDQGEFENAIASYQKVLELNP 1000
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+Y E Y NLG +Y+ + A AY Q L +
Sbjct: 1001 SYGEVYFNLGRIYQTQKQLEEAASAYRQGLML 1032
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y LGV + ++D A + P+ +A +LG + + + L +VECYQ L+
Sbjct: 811 LYGLGVLAQQTGQYDTAEKLFRATVEAEPNSVKAWFSLGNLCQGQGQLSDSVECYQRVLT 870
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT---------------------- 98
I+PN NNLG QG D A ++A+ PT
Sbjct: 871 IQPNLVPVYNNLGYALQQQGNWDDAIASYQQALEIEPTCTEADVNLGNALHAQEKLALEK 930
Query: 99 ---YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
YA+ + LGV + AG ++ A+ Y Q + + D +A N
Sbjct: 931 QAHYAQLNHELGVTRQKAGDLTNAVAYYRQAVAMQSDLVSAHYN 974
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+ V + + + + A+ Y P+ EA LGV+ + D A + ++ + +P
Sbjct: 780 IAVQHRQANRLNQAVQLYYKILEQQPNHPEALYGLGVLAQQTGQYDTAEKLFRATVEAEP 839
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N ++ +LG + QG++ + E ++ + P YNNLG + G+ AI +Y
Sbjct: 840 NSVKAWFSLGNLCQGQGQLSDSVECYQRVLTIQPNLVPVYNNLGYALQQQGNWDDAIASY 899
Query: 124 EQCLKIDPDSRNAGQN 139
+Q L+I+P A N
Sbjct: 900 QQALEIEPTCTEADVN 915
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LGV + A+ +Y A A NLGV+ +D+ + A+ YQ L +
Sbjct: 939 HELGVTRQKAGDLTNAVAYYRQAVAMQSDLVSAHYNLGVVLQDQGEFENAIASYQKVLEL 998
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIA-ANPTYAEAYN 104
P++ + NLG +Y Q +++ AA + + NP Y + N
Sbjct: 999 NPSYGEVYFNLGRIYQTQKQLEEAASAYRQGLMLVNPRYGKVVN 1042
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 48 LDKAVECYQMALSIKPNFSQ------------SLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
LD+A Y+ + I+ ++ ++ N ++ + K++ A + ++A+
Sbjct: 27 LDEAESIYRQVIQIQGDYQGEEKSLLKPYNVIAIANFASIFEEKNKLEEAVALYQQALTL 86
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
P +AE +NNLG ++ G + A+ Y++ +K+ PD A N
Sbjct: 87 KPDFAEVHNNLGNIFWAKGELDKAVQYYQEAIKVKPDYAVAHNN 130
>gi|254475750|ref|ZP_05089136.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
putative [Ruegeria sp. R11]
gi|214029993|gb|EEB70828.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
putative [Ruegeria sp. R11]
Length = 730
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 154/585 (26%), Positives = 242/585 (41%), Gaps = 52/585 (8%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G Y + A+ Y+ A +P C A NN+G ++D + +A EC+ A+ P
Sbjct: 131 MGDVYKRQNRGQDALALYKKALSLDPACLPALNNMGNTLLEQDKIIEADECFAKAIEQAP 190
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ +Q L N + G +D A ++ E+A P + EA NL + AG + AI
Sbjct: 191 DNAQLLYNRANIQRQLGNVDVACKLYEQAARYAPNFLEARYNLAQMAGQAGRQAEAIHHL 250
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR-DWGKR----------------- 165
EQ L P A +L M + + ++AHR + G R
Sbjct: 251 EQILVARPADDRARARKLRLMAELCDWRWIDEYQAHRRNLGLRGSACAPQALIGLEDNPD 310
Query: 166 FMRLYSQYTSWDNTK-DP--------ERP--LVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
+R+ Q + +P RP L IGY ++ L HD
Sbjct: 311 LLRIRMQAHAHAAPAAEPVHLAAATDSRPVQLRIGYFVSSARDRDALDRLDTLLAQHDTS 370
Query: 215 NYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGH 274
+ + Y A RE RD+ G+ + + DK+DI ++LT
Sbjct: 371 RFALYAYVAGPA--------REGCAHVH--HRDLRGLAASTIRTQAQADKLDIAIDLTSF 420
Query: 275 TANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPEC 334
T + + + APVQ+ G+P T G DY +TD++ PP +++ E LIR+P
Sbjct: 421 TEEVETQVFGARIAPVQIALPGFPGTMGTLAYDYLLTDAVTCPPGSERYFEEHLIRMPHS 480
Query: 335 FLCYTPSPE------AGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
+ +P+ + C P +GF+ F + ITP+ +W R+L V +S
Sbjct: 481 YHGSIEAPDLSGHQFSRRDCGLP--DDGFV-FCTLAPSHAITPREYDIWMRLLTKVGDSV 537
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYA 448
L + P + E G+ R+ P + M + D+ LDTF
Sbjct: 538 LWMPDYP---TKAQVALRKEAEARGVSPERLIFGP-ACDGSERMARAKVADLFLDTFTLN 593
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVT 508
T E+L G+P ++MAG A SLLT GL L+ +E Y AL+LA D
Sbjct: 594 AGPTAREALIAGLPVLSMAGRQFAARTTASLLTAAGLGELLTTSEKTYEARALELAEDRD 653
Query: 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L LR LR + +K+P+ D +A LE + + R +G P
Sbjct: 654 QLMTLRSKLRLMQAKAPLFDNSRYARDLERGFEMAFARCLEGLPP 698
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + D A A P A +G +YK ++ A+ Y+ ALS+ P
Sbjct: 97 LGRCHLAQNALDEAATCLNKACELQPTSATTFAAMGDVYKRQNRGQDALALYKKALSLDP 156
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+LNN+G Q K+ A E KAI P A+ N + R G++ +A Y
Sbjct: 157 ACLPALNNMGNTLLEQDKIIEADECFAKAIEQAPDNAQLLYNRANIQRQLGNVDVACKLY 216
Query: 124 EQCLKIDPD 132
EQ + P+
Sbjct: 217 EQAARYAPN 225
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 30 HCAEACNN----------LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
CAE N LG + ++ LD+A C A ++P + + +G VY Q
Sbjct: 79 RCAELLNTHRKSAFLWELLGRCHLAQNALDEAATCLNKACELQPTSATTFAAMGDVYKRQ 138
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ A + +KA++ +P A NN+G + I A + + + ++ PD+ N
Sbjct: 139 NRGQDALALYKKALSLDPACLPALNNMGNTLLEQDKIIEADECFAKAIEQAPDNAQLLYN 198
Query: 140 R 140
R
Sbjct: 199 R 199
>gi|113476017|ref|YP_722078.1| hypothetical protein Tery_2387 [Trichodesmium erythraeum IMS101]
gi|110167065|gb|ABG51605.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 745
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 138/565 (24%), Positives = 244/565 (43%), Gaps = 44/565 (7%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y + ++ E+ +A + E+ +F P E + D D +E Q + +
Sbjct: 206 IYQIAYSFAEV---GVARKYTEILLNFVPENKEVLRTMAQFSTDLKEYDLGIEYAQKSSA 262
Query: 61 I-KPNFSQSLN----------NLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+ K F + ++ + G VQ ++ ++++ I +P E L
Sbjct: 263 LSKKTFEKVIDYYLVCRSLIASKGCDKEVQEAVEKEEKLLQSLITESP--QELAGAAIRL 320
Query: 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRL 169
Y A D E+ +KI Q L + +K+ + H+ +L
Sbjct: 321 YSSVFFFPYARDCPEKNMKIRTQVAELCQLNLA------KACSEKINKYHQ-------KL 367
Query: 170 YSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKA 227
+SQ ++ L IGY+S HSV + YH+ + Y++ Y A +
Sbjct: 368 FSQ----KQIHPTKKTLKIGYLSHCLRKHSVGWIARWLFKYHNREKYEIYAYLQGAENRN 423
Query: 228 DAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQP 287
D+ + + K +YGI ++A + ED+IDIL++L T N +MA +
Sbjct: 424 DSLQQWYINQATKA-----HVYGIVSTEMAEDIYEDEIDILIDLDSTTLTNSCSIMAMKA 478
Query: 288 APVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPV 347
AP+QVTW+G+ + +G+PT+DY I D P + + ++ RLP+ +L P
Sbjct: 479 APIQVTWLGW-DASGIPTVDYFIADPYVLPENAQDYYPHKIWRLPQTYLAVNGFEVDVPS 537
Query: 348 CPTPALT--NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRF 405
L + + + + K P +++ +IL VP S + K D++
Sbjct: 538 IKREDLGIPSDAVVYFTAQRGHKYNPDTVRLQMKILKEVPQSYFLFK-NLGDSDTLSELL 596
Query: 406 LSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVT 465
+ E G+ S R+ + + L H + DI LDT+PY G TTT E+L+M +P VT
Sbjct: 597 IDIAESEGISSDRLIPIEEVSLEQTHRANLGIADIVLDTYPYNGATTTLETLWMCIPMVT 656
Query: 466 MAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
G A +++ G+ IA +++EYV+ ++L D + LR +P
Sbjct: 657 RVGQQFAARNSYTMMMNTGITEGIAWSDEEYVEWGIRLGKDEKLRQEISWKLRKSRQTAP 716
Query: 526 VCDGQNFALGLESTYRNMWHRYCKG 550
+ + + F L +E Y MW RY +G
Sbjct: 717 LWNAKKFTLEMEKAYEEMWQRYVEG 741
>gi|398350156|ref|YP_006395620.1| hypothetical protein USDA257_c02650 [Sinorhizobium fredii USDA 257]
gi|390125482|gb|AFL48863.1| hypothetical protein USDA257_c02650 [Sinorhizobium fredii USDA 257]
Length = 684
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 145/572 (25%), Positives = 235/572 (41%), Gaps = 75/572 (13%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N V + +L ++ + L ++P F Q NLG G + +AI
Sbjct: 71 NYSVTLRQMGDLAGSIHALRGCLKLEPRFGQGHINLGRALEDAG-------LTGQAIQQW 123
Query: 97 PTYAEAYN---------------NLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN-- 139
YAE + ++G + +AG + A + + +++ PD AGQ+
Sbjct: 124 QAYAETTSEITPERVAHRLMVLQHMGRVLENAGLMEEAENTLWKAIELRPDKTEAGQHWT 183
Query: 140 ----------RLLAMNYINEGH--------------DDKLFEAHRDW-------GKRFMR 168
L+ +++ DD +F+ + + G+ +
Sbjct: 184 SLRQRQCKWPTLVPSEHVSARQLLDALSPLTLACYADDPVFQLAKAYRYCKSLVGRPDLS 243
Query: 169 LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVK 226
+ + T +R L +GYVS D H+V + + HD + ++ Y V
Sbjct: 244 DFPKLQPRRKTGTGQR-LRVGYVSSDLRDHAVGFALSEVFETHDKNSVEIYAYYCGEVRT 302
Query: 227 ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
DA R +M WRDI + + A + D+IDILV++ G+T + + + A +
Sbjct: 303 GDATQTR----MMSAIDCWRDISTVSDSDAAKRIIADEIDILVDVNGYTKHARTRIFAYR 358
Query: 287 PAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP 346
PAPV VT+ GYP T G P Y I D PPE + + E+++R+P C P
Sbjct: 359 PAPVIVTFCGYPGTMGSPFHQYIIADEHIIPPENEIYYSEKVLRIP----CNQPVDRKRQ 414
Query: 347 VCPTPA-----LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
+ P P+ L F FN + KIT W IL A P S L + + V
Sbjct: 415 IAPRPSRAEVGLPEDAFIFACFNGMQKITAACFDRWMAILSATPGSFLWLLGG---GEDV 471
Query: 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
R EQ G+ R+ + N H+ L D+ LDTFPY +T ++L MG+
Sbjct: 472 DQRLKQAAEQHGVAPERL-IFASKAPNPKHLARIGLADLFLDTFPYGAHSTAGDALTMGL 530
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P +T G+ A S++ G+ LI D++V+ A+ A D +LA +R +L
Sbjct: 531 PVLTFPGNGFASRFCSSIVAAAGVPELICDGPDDFVRKAIGFARDRQSLAAVRQALESRR 590
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
S + D LE + M +G+ P
Sbjct: 591 EASVLRDIPALVRRLEELFWQMQGECERGETP 622
>gi|425464283|ref|ZP_18843605.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389833753|emb|CCI21475.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 716
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 178/374 (47%), Gaps = 11/374 (2%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
KD + + IGY++ HS+ + YHDY + V +Y K D T F+ +V
Sbjct: 351 KDANKVIKIGYIANTLGNHSIGLISRWLMKYHDYNQFHVSLYLVSQKEDFITENDFKNRV 410
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+ I +A + +D IDILV+L T +MA +PAP+QVTW+G+
Sbjct: 411 NACYNL-----PIKPLLIAEKISQDNIDILVDLDSITNEATCQVMALKPAPIQVTWLGF- 464
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NG 356
+ +G+P IDY + D+ P + ++ + E++ RLP ++C A P L
Sbjct: 465 DASGIPAIDYYLADNYVLPADAQEYYREKIWRLPNSYICVDGVEVASPSLRRDDLGIPED 524
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I + + K P+ +++ +IL AVPNS L ++ SV F E+ G+
Sbjct: 525 AINYLTAQTGVKRNPETIRLQLQILKAVPNSYLSIQGLS-DAKSVEKLFFKVAEEEGINY 583
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ + PL + + D+ LDT+P+ G TT + L+MG+P VT G +
Sbjct: 584 ERLKIFPLYPTGI-YRANLRIADVVLDTYPFTGGMTTLDVLWMGIPLVTKVGQQWSSRNS 642
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+L+ G+ IA +++EY+ ++L D + L + SP+ + + F +
Sbjct: 643 YTLMVNAGISEGIAWSDEEYIDWGIKLGKDENLRRKVIAKLDESRQTSPLWNARQFTKNV 702
Query: 537 ESTYRNMWHRYCKG 550
ES YR MW YC+
Sbjct: 703 ESAYRQMWQIYCES 716
>gi|375104105|ref|ZP_09750366.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderiales bacterium JOSHI_001]
gi|374664836|gb|EHR69621.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderiales bacterium JOSHI_001]
Length = 630
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 155/554 (27%), Positives = 239/554 (43%), Gaps = 54/554 (9%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA-A 86
+PH AC N G + A Y+ AL++ P F+Q+ NLG QG+ + A A
Sbjct: 64 SPHLHVACFNWGTLLASLGRGADATAAYRRALALLPGFAQARVNLGHELERQGENEQALA 123
Query: 87 EMIEKAIAA----NPTY---AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ- 138
E A A+ NP A A NN L A + L+ DP + Q
Sbjct: 124 EWRTVAEASLKAPNPDRELTAHAMNNQARLLEQLKRFDEAEAWMRRSLEFDPLQPSVIQH 183
Query: 139 ----------------------NRLL----AMNYINEGHDD--KLFEAHRDWGKRFMRLY 170
N+LL A+ ++ D +L A + +R +
Sbjct: 184 YVHIRQKQCEWPVYSPVGQVTANQLLCHTSALAMLSASDDPALQLLAARQFVAERVPK-- 241
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
+D + P L IGY+S D H+V L HD ++V Y + D
Sbjct: 242 PGPALFDANRVPGDKLRIGYLSGDLHMHAVGLLTVELLELHDKSRFEVFGY-CWGRNDGT 300
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
+IR R + I G+D+ A + D ID+L++L G T + ++ +PAPV
Sbjct: 301 SIRARILAALDHHV--PIAGMDDLSAARRIAADGIDVLIDLQGLTNGARPAILVNRPAPV 358
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT 350
QV+++G P T+ LP +D+ + D PPE + E+ I LP CY S + P
Sbjct: 359 QVSYLGLPATSALPGVDWILADDFVVPPELRPCLSEKPIYLPN---CYQSSDRQRDMAPR 415
Query: 351 P-----ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRF 405
P L + SFNN K TP+V W R+L AVPNS L + ++ F
Sbjct: 416 PQRNTYGLPEDAFVYCSFNNNFKFTPEVFGAWMRMLKAVPNSVLWLLADNRWAEANMRAF 475
Query: 406 LSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVT 465
++ G+++ R+ P + +++ + L D+ LDTFPY TT + L+ G P +T
Sbjct: 476 ---AKENGVDAARLIFAPRV-SPAEYVARFQLADLVLDTFPYNAGTTANDVLWAGTPILT 531
Query: 466 MAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
++G + + SLLT VGL LI + EY Q A+Q+ A+ + L + +S
Sbjct: 532 LSGRSYISRMCGSLLTAVGLPELITTSLAEYEQRAIQIGRQPARSASYKRYLAEEGRRSA 591
Query: 526 VCDGQNFALGLEST 539
+ D F E+
Sbjct: 592 LFDMPRFVRDYETA 605
>gi|118594932|ref|ZP_01552279.1| SPY protein [Methylophilales bacterium HTCC2181]
gi|118440710|gb|EAV47337.1| SPY protein [Methylophilales bacterium HTCC2181]
Length = 621
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 145/595 (24%), Positives = 270/595 (45%), Gaps = 69/595 (11%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGV--------IYKDRDNLDKAVECY 55
LG + + KFD+A ++ A + P + LG +K+R+ L A +
Sbjct: 43 LGNLFAMINKFDIAAGYFRRAIYQFPDNDQIRYGLGFCLQRIGNEYHKNRNYL-MAQAAF 101
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
+ A+ I P+ ++ L NLG + QG A E+++ P EA++N+ Y+
Sbjct: 102 EEAIEICPDNAEHLFNLGNAFYAQGLFKKALNSFEESLQILPD-NEAHHNIANSYKKLND 160
Query: 116 ISLAIDAYEQCLK-IDPDSRNA--------------GQNRLLAM--NYINEGHDDKL--F 156
A YE+ L+ D G N+++ + N+I EG ++ F
Sbjct: 161 YVKAKKHYEKALEGTDLQIHTVVELIQLKQLTCDWIGLNKIITVLKNHIKEGKTGRISPF 220
Query: 157 EAHRDWGKRFMRLYSQYTSWDNTK--DPER---------PLVIGYVSPDYFTHSVSYFIE 205
G +SW + +PE+ +VIGY+S D+ H + + I
Sbjct: 221 TVLSMPGLSTNEHTKVASSWIESSHINPEKFKRLLKKNPKIVIGYISSDFRLHPLYFLIR 280
Query: 206 APLVYHDYQNYKV-VVYSAVVKADAKTIRFREKVMKKGGIWRDIYGI----DEKKVAAMV 260
L HD + V + YS V + F+ I + + I DE+ ++
Sbjct: 281 DVLKKHDKDRFTVKLFYSGVDDGSNEHQEFK-------NIGVNFFNISNQSDEELKETLI 333
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL----PTIDYRITDSLAD 316
E+ IDILV+L+G T ++ + A +P+ + + W+G+P + G P +DY + DS
Sbjct: 334 AEN-IDILVDLSGFTMQSRSLIAAYKPSKISINWLGFPGSMGFYRDKPLMDYILADSFII 392
Query: 317 PPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITFGSFNNLAKITP 371
P + + E++IRLP C Y P+ + P + + F SF KIT
Sbjct: 393 PKSMESDYAEKIIRLPGC---YQPNIDDRPKTQAIKKSVYGIDDDAFVFASFGQSIKITE 449
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
+ ++W ++L S L + ++ H++ ++ G++S+R+ P + N DH
Sbjct: 450 SMFRLWIKLLKQKDGSILWLLESNAQAENNIHKYA---KKEGVDSVRIKFAPKVNFN-DH 505
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
+ +S++D+ LDT+PY T++ ++++ G P +T++G A V S+L ++ + LI K
Sbjct: 506 INRHSIIDLFLDTYPYNAHTSSSDAIWAGCPVLTLSGKTFASRVAGSILKEISCEMLITK 565
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
E+EY ++A L+++ L +++ + + S + +F LE Y + +
Sbjct: 566 TEEEYFKVASVLSNNDIKLKSIKEKVLKGKNSSSLFKSTHFVKKLEQVYSELLEK 620
>gi|427720511|ref|YP_007068505.1| hypothetical protein Cal7507_5336 [Calothrix sp. PCC 7507]
gi|427352947|gb|AFY35671.1| TPR repeat-containing protein [Calothrix sp. PCC 7507]
Length = 739
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 179/370 (48%), Gaps = 9/370 (2%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
+ L IGY+S HSV + +H+ + + Y V ++ + G
Sbjct: 375 KKLKIGYISYALRNHSVGWLARWLFQHHNQDKFDIHTY--FVNYQLIDDYIQQWYVNNAG 432
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
+ G++ ++A + +D+IDILV+L T + +MA +PAP+QVTW+G+ + +G+
Sbjct: 433 TAHKL-GMNGLRIADQIYQDEIDILVDLDSITLDITSEVMALKPAPIQVTWLGW-DASGI 490
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL---TNGFITF 360
P IDY I D P + + + E++ RLP+ ++ P L TN + +
Sbjct: 491 PAIDYYIADPYVLPDDAQNYYTEKIWRLPQTYIAVDGFEVGVPTLRREDLDIPTNA-VVY 549
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
S K P+ + +IL VP+S ++K ++++ F E+ G++ R+
Sbjct: 550 LSAQRGYKRHPETTRWQMQILKQVPDSYFLIKGLS-EEEAIKRFFYQIAEEEGVDCSRLR 608
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LP + L H + D+ LDTFPY G TTT E+L+MG+P VT G A +++
Sbjct: 609 FLPQVYLESVHRANLGIADVVLDTFPYNGATTTLETLWMGIPLVTRVGEQFAARNSYTMM 668
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
G+ +A + EY++ ++L D + + L+ +P+ +G+ F +E Y
Sbjct: 669 INAGITEGVAWTDAEYIEWGVRLGKDEALRQQVTLKLKASRQTAPLWNGKQFTREMEKAY 728
Query: 541 RNMWHRYCKG 550
MW RY +G
Sbjct: 729 EQMWQRYIEG 738
>gi|428315860|ref|YP_007113742.1| TPR repeat-containing protein [Oscillatoria nigro-viridis PCC 7112]
gi|428239540|gb|AFZ05326.1| TPR repeat-containing protein [Oscillatoria nigro-viridis PCC 7112]
Length = 744
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 246/550 (44%), Gaps = 38/550 (6%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN----LDKAVECYQMALSIKPN-FSQSL 69
D+A F EL P E +L +Y+D N +D A +CY + + F+ L
Sbjct: 215 DLAASFAELGLRLEPQHIEVLRHLAALYQDAQNYSKGIDFAKQCYSLLEELPERVFANHL 274
Query: 70 NNLGVVYTVQGKMDAAAEMIEK-------AIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
G+++ G ++ A +++K + PT + + + +
Sbjct: 275 ILRGLMH-AGGYLEEACSLLQKHESLLLSLVELQPTTLDQITTIRL---------FSTPY 324
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYIN-EGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKD 181
Y L+ P++ N +N+L + N E + E R + +S
Sbjct: 325 YFPYLRDAPEANNRTRNQLAHICQKNIEIYAKDRVELSRQ---------RRASSTQKIDA 375
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
+PL IGY+S HSV + YHD +N+++ Y V + K +E + +
Sbjct: 376 SAKPLKIGYLSHCLRVHSVGWLARWLFEYHDQENFQIYAY-LVNSKERKDDPLQEWYINQ 434
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+ G+ ++A + ED IDILV+L T + +MA + APVQVTW+G+ + +
Sbjct: 435 ASQAYKL-GVRGLEIADRIYEDDIDILVDLDSITLDVTCEVMALKLAPVQVTWLGW-DAS 492
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFIT 359
GLP IDY I D P ++ + E++ RLP+ ++ A P L + +
Sbjct: 493 GLPAIDYFIADPYVLPENAQEYYSEKIWRLPKTYIAVDGFEVAVPTLRRDELNIPSDAVV 552
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
+ S K P ++ +IL VPNS ++K + V+ F E+ G++ R+
Sbjct: 553 YLSAQRGFKYNPNTARLQMKILKEVPNSYFLLKGMA-NQELVKSFFAQLAEEEGVDCDRL 611
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
LP + L+ H + D+ LDT+PY G TTT E+L+MG+P VT G + ++
Sbjct: 612 RFLPGVALSATHRANLGIADVVLDTYPYNGATTTLETLWMGIPIVTRVGQQFSSRNSYTM 671
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+ G+ IA ++EY++ ++L D + LR +P+ + + F +E
Sbjct: 672 MINAGITEGIAWTDEEYLEWGIRLGKDSALRQQISWKLRQARQTAPLWNAKEFTREMEKA 731
Query: 540 YRNMWHRYCK 549
Y+ MW RY +
Sbjct: 732 YKQMWQRYLE 741
>gi|295688661|ref|YP_003592354.1| hypothetical protein Cseg_1236 [Caulobacter segnis ATCC 21756]
gi|295430564|gb|ADG09736.1| TPR repeat-containing protein [Caulobacter segnis ATCC 21756]
Length = 676
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 173/375 (46%), Gaps = 21/375 (5%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY-SAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D H+V Y + HD + +V Y +D R R V +
Sbjct: 253 IGYISSDLRDHAVGYLMAELFEVHDREKVEVFAYYCGPESSDGLNTRIRAAVEH----FI 308
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
DI + + + A + +D IDILV++ GHT + + + A +PAP+ V W+GYP T G
Sbjct: 309 DIRPMSDDEAAQRIVDDGIDILVDVNGHTRDARTAVFARRPAPILVNWLGYPGTMGSDYH 368
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPV---CPTPA---LTNGFITF 360
Y + D PPE + + E + R+P CY P+ V CP+ A L + F
Sbjct: 369 HYIVADPWIIPPEMEHYYSEAVRRIP----CYQPNDRRRKVEEACPSRADAGLPDDAFVF 424
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
FN + KITP + W +IL P S L ++ P R + E G++ R+
Sbjct: 425 CCFNGVQKITPHMFDRWIQILKRTPGSVLWLLDSNP----EANARLRDSAEAKGVDRTRI 480
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
P L N H+ Y L D+ LDT PY TT ++L+M VP +T +G A V SL
Sbjct: 481 VFAPK-LQNAYHLARYRLADLFLDTTPYGAHTTASDALWMAVPVLTWSGRSFASRVCGSL 539
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+ GL L+ + + YV+ A+++ +D LR +L + + A LE+
Sbjct: 540 VRSAGLPELVVDSGEAYVEKAVEIGADREKAQALRATLEANRDTCVLFNMDLLASSLETL 599
Query: 540 YRNMWHRYCKGDVPS 554
Y M Y G PS
Sbjct: 600 YGEMIAEYQSGGRPS 614
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 32 AEACN-----NLGVIYKDRDNLDKAVECYQMALSIKPNFSQ---SLNNLGVVYTVQGKMD 83
AE C+ N+ V A + Y++ P+ Q +L N V+ + G
Sbjct: 15 AEGCSLGDLINMAVELSQAGKPQVADQAYKIWARFNPDHPQLCVALFNRSVLQSALGDNS 74
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143
AA +E+AIA NP + AY NLG L AG LAI +E AG NR
Sbjct: 75 GAAASLEQAIALNPDFMPAYVNLGGLQERAGLGELAIATWE-----------AGANRPAT 123
Query: 144 MN 145
MN
Sbjct: 124 MN 125
>gi|166363522|ref|YP_001655795.1| hypothetical protein MAE_07810 [Microcystis aeruginosa NIES-843]
gi|166085895|dbj|BAG00603.1| hypothetical protein MAE_07810 [Microcystis aeruginosa NIES-843]
Length = 719
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 13/371 (3%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
+ L IGY++ H V + YH+ + + + +Y D T ++ K
Sbjct: 358 KKLKIGYIAQSLKRHPVGLLSRWTINYHNREQFDIHLYMVSQPVDEITKQWFSNPADK-- 415
Query: 244 IWRDIY--GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
IY D ++ED IDILV+L T ++A +PAP+QV W+G+ + +
Sbjct: 416 ----IYHATADSLVTYRKIKEDNIDILVDLDSGTGAIVAKVIALKPAPIQVNWLGF-DGS 470
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL--TNGFIT 359
GLP +DY + D P ++ + E++ RLP+ F+ A P L N +
Sbjct: 471 GLPAVDYLLADPYVLPENAQEYYQEKIWRLPDAFVAVDGFEIAVPTLRREDLGINNDAVI 530
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
+ S K P ++++ +I+ +VPNS +++ +S+ F ++G+E+ R+
Sbjct: 531 YLSSQTAIKRNPAMIRLQMQIIKSVPNSYFLIQGVA-DDNSLWDLFCQIAAEVGVETNRI 589
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+LPL + ++ D+ LDT+P+ G TTT E+L+MG+P V G + G +L
Sbjct: 590 KMLPL-YQTETYRANLAIADVVLDTYPFNGGTTTLETLWMGIPLVVKVGQQWSSRNGYTL 648
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+ G+ I+ +++EYVQ ++L D +R LR SP+ + + F LE+
Sbjct: 649 MMNAGITEGISWSDEEYVQWGIKLGLDRNLREEVRWKLRKSRHTSPLWNAKQFTRDLETA 708
Query: 540 YRNMWHRYCKG 550
YR MW+ YC+
Sbjct: 709 YRQMWNIYCQS 719
>gi|383757550|ref|YP_005436535.1| TPR repeat protein [Rubrivivax gelatinosus IL144]
gi|381378219|dbj|BAL95036.1| TPR repeat protein [Rubrivivax gelatinosus IL144]
Length = 670
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 186/390 (47%), Gaps = 19/390 (4%)
Query: 173 YTSWDNTKDP--ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK 230
YT+W + + +G+VS D+ TH+ S L ++VV+YS AD
Sbjct: 282 YTAWPRAAEAVASGRIRVGFVSADFRTHATSMLAVRTLEKLPRDRFEVVLYSH--GADDG 339
Query: 231 TIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
+ RE+++ + D + + A + +D I +LV+++G+T N ++G+ A +PAPV
Sbjct: 340 SA-LRERMIAAADRFVDCNEMSATEQAQQIHDDGIALLVDMSGYTGNTRIGVFALRPAPV 398
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPS------PEA 344
+ W+ YP+T G +DY + D + P E + E + +LP LCY P+ PE
Sbjct: 399 RTLWLAYPSTLGARFVDYVVGDPILTPLEHAEDFTEHIAQLP---LCYEPTDPLREHPEP 455
Query: 345 GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR 404
+ F+ F FN KIT V W RIL VP S L + ++
Sbjct: 456 SSRAEAGLPEHAFV-FACFNQSYKITEPVFTRWCRILERVPGSVLWLLVPQV---EIQAA 511
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
+ + G+E R+ P + + +H+ D+ LDTFPY TT ++L+MG+P +
Sbjct: 512 LRARAAERGIEPERLIFAPFVTPS-EHLARLPQADLFLDTFPYGAHTTCSDALWMGLPVL 570
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
T G + V SLL VGL L ++E+ Y +LA++LA+ L R L +
Sbjct: 571 TQIGRSFSARVAASLLAAVGLPELAVESEEAYEELAVRLATVPGELQRARQHLDTKRLEL 630
Query: 525 PVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
P+ D + F L + + M R+ G P+
Sbjct: 631 PLFDNERFTPELAALFERMVGRWRDGLPPA 660
>gi|222148768|ref|YP_002549725.1| hypothetical protein Avi_2410 [Agrobacterium vitis S4]
gi|221735754|gb|ACM36717.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 624
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 183/367 (49%), Gaps = 21/367 (5%)
Query: 186 LVIGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG-G 243
L IGY+S D++ H+ + + L HD +++ ++ T R + K G
Sbjct: 241 LRIGYLSGDFWDNHATMRLLRSVLTSHDTSRFEIFLF-------CHTPRHLVDIDKGGRQ 293
Query: 244 IWRDIYGIDEK---KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
W I I ++ + A +R KIDI+V+L GHT +++ G+M APV V W+G+P +
Sbjct: 294 QWGAITSIADQTDDEAEATIRAMKIDIMVDLKGHTRDSRSGLMNRPLAPVHVAWLGFPGS 353
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFL----CYTPSPEAGPVCPTPALTNG 356
DY I D + P K + E+ RLPE + + P P A L
Sbjct: 354 CCDVDCDYVIGDRIVLPDSAKPHYHEKFCRLPESYQPNDPFHRPLPSASSRMAL-GLPAD 412
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+ G+FN+ +K TP+ L++WARIL A P + L + S R + + LG++
Sbjct: 413 RVVIGAFNSQSKNTPETLRLWARILKANPTALLWMMVDGH---SARQSTAAFFKSLGVKQ 469
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
++ P +L +H+ D ++D+FPY G TTT + L+ G+P +T G+ A V
Sbjct: 470 SQLLFAPKMLYE-NHIARAQAADFAIDSFPYNGHTTTSDMLWAGLPVITKRGTNFASRVS 528
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
SLL +GL L+A++ED +V+LA + +D +A L+ + + +P+ D F L
Sbjct: 529 ESLLKAIGLDELVARDEDNFVELATVMINDPARIARLKAHIAEQRFIAPLFDATRFCHHL 588
Query: 537 ESTYRNM 543
E+ Y M
Sbjct: 589 EAAYDTM 595
>gi|17228058|ref|NP_484606.1| hypothetical protein all0562 [Nostoc sp. PCC 7120]
gi|17129907|dbj|BAB72520.1| all0562 [Nostoc sp. PCC 7120]
Length = 739
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/554 (25%), Positives = 246/554 (44%), Gaps = 49/554 (8%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF------- 65
+FD+AI EL +P E +L +Y++ K +E ++ S+ +
Sbjct: 213 QFDIAINLCELYLKISPKNTEVMGHLSSLYQNAGQYKKGIETAELFFSLVHDLVDKVFAN 272
Query: 66 SQSLNNL---GVVYTVQGKMDAAAEMIEKA-IAANPTYAEAYNNLGVLYRDAGSISLAID 121
Q L L G + ++ E++ K+ I NPT NL +A IS +
Sbjct: 273 RQILRGLITAGGYWEESCSVNDKQELLIKSLIEDNPT------NL-----NAARISRLFN 321
Query: 122 A--YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQ-YTSWDN 178
A + ++ +P QN+LL + N H D+ + YS +
Sbjct: 322 ANYFAFYIEDNPSKNRKIQNQLLQICQNNISHLDR----------EIIEKYSHGHLVRKK 371
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIRFRE 236
K + L IGYVS +HSV + + +HD +++ Y + DA +
Sbjct: 372 QKQINKKLTIGYVSHCMRSHSVGWLARWLVQHHDRDKFQLNAYFLNTNPALDALHEWYLI 431
Query: 237 KVMKKGGIWRDIYGIDEK-KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
KV K Y +E ++A + D+IDIL++L T + ++A +PAP+Q+TW+
Sbjct: 432 KVDKT-------YKSNEYLQIAEEIYNDEIDILIDLDSITLDTTCDIIALKPAPIQITWL 484
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT- 354
G+ + +G P+IDY I D P ++ + E + RLP+ ++ P L
Sbjct: 485 GW-DASGSPSIDYFIADPYVLPESAQEYYTERIWRLPQTYIGVDGFEVGVPTVRRDQLDI 543
Query: 355 -NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
+ + + K P + ++ +I+ VPNS ++K +S+++ F E+ G
Sbjct: 544 PDDAVVYFCGQRGFKRHPDITRLQLQIIKEVPNSYFLIKGIS-DEESIKNFFEELAEEEG 602
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
++ R+ LP++ H + DI LDT+PY G TTT E+L+M +P VT G A
Sbjct: 603 VDYSRLRFLPIVATESVHRANLGIADIVLDTYPYNGATTTLETLWMCIPMVTKVGEQFAA 662
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+++ G+ IA ++EYV+ ++L D + L+ SP+ +G+ F
Sbjct: 663 RNSYTMMMNAGITEGIAWTDEEYVEWGVRLGKDEALRQQIAWKLKQSRKTSPLWNGKQFT 722
Query: 534 LGLESTYRNMWHRY 547
+E Y MW Y
Sbjct: 723 REMEKAYTQMWEIY 736
>gi|428217495|ref|YP_007101960.1| hypothetical protein Pse7367_1237 [Pseudanabaena sp. PCC 7367]
gi|427989277|gb|AFY69532.1| TPR repeat-containing protein [Pseudanabaena sp. PCC 7367]
Length = 798
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/556 (26%), Positives = 243/556 (43%), Gaps = 47/556 (8%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A + EL AEA +L Y D+++E + +++ + ++ +G
Sbjct: 269 AALLAELCLQVPNSKAEALRHLASFYLSGYEYDRSIEAAEAYYAMQTDLAE--KAMGNHL 326
Query: 77 TVQGKMDAAA-------------EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+Q +M A +++EK + PT NL R + + + +
Sbjct: 327 ALQARMKAGGYWQEALKLADRQTQLLEKLVTEYPT------NLD---RISAIRLFSANFF 377
Query: 124 EQCLKIDPDSRNAGQNRLLAM---NYINEGHD--DKLFEAHRDWGKRFMRLYSQYTSWDN 178
L P++ NRL A+ N N D K + H + KR +
Sbjct: 378 PPYLHDQPEANRQISNRLAALCQANVRNYASDLATKFEQGHTERAKRIGK---------G 428
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKV 238
+ P+R L IGY+S +F+HSV + HD +N+++ Y + K+ + +
Sbjct: 429 DRPPQRRLKIGYLSHHFFSHSVGWLSRWLFAEHDRENFEIFTYFILYKSHYDVV---QDF 485
Query: 239 MKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYP 298
+++ + +K+A + D IDIL++L T + +MA +PAP+Q TW+G
Sbjct: 486 IEQSSEHVRKLDANSRKIAEQIYADDIDILIDLDSITLDVTCEIMALKPAPIQATWLGM- 544
Query: 299 NTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NG 356
+ +G+P IDY I D P E + + E++ RLP FL A P L
Sbjct: 545 DASGMPAIDYFIADPYILPAEADRYYHEKIWRLPRTFLAIEGFGMAVPTIHRRDLNIPAA 604
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL-EQLGLE 415
+ + S K P + +I+ AVPNS ++K F + +F L +Q G+E
Sbjct: 605 SVVYLSSQIGYKRHPDHARSQMQIIKAVPNSYFLIKG--FADQNTVQKFFYELADQEGVE 662
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ L L +H ++ D+ LDTFPY G TTT E+L+ GVP VT G A
Sbjct: 663 RDRLIFLANTSLEIEHRANLAIADVVLDTFPYNGATTTMETLWAGVPIVTRVGQQFAARN 722
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
S+L G++ IA ++ EY+ ++L SD L+ + +P+ + F
Sbjct: 723 SYSMLVNAGIEAGIAWSDQEYIDWGIRLGSDRQLHQKAYSQLQKGKNSAPLWNTHQFVQD 782
Query: 536 LESTYRNMWHRYCKGD 551
LE Y MW +C GD
Sbjct: 783 LEQAYLGMWAEHCGGD 798
>gi|422303122|ref|ZP_16390476.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389791933|emb|CCI12279.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 719
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 13/371 (3%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
+ L IGY++ H V + YH+ + + + +Y D T ++ K
Sbjct: 358 KKLKIGYIAQTLKRHPVGLLSRWTINYHNREQFDIHLYMVNQPVDEITKQWFSNPADK-- 415
Query: 244 IWRDIYGIDEKKVAAM--VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
IY +A ++ED IDILV+L T ++A +PAP+QV W+G+ + +
Sbjct: 416 ----IYHATADSLATYRKIKEDNIDILVDLDSGTGAIVAQVIALKPAPIQVNWLGF-DGS 470
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL--TNGFIT 359
GLP +DY + D P ++ + E++ RLP+ F+ A P L N +
Sbjct: 471 GLPAVDYLLADPYVLPENAQEYYQEKIWRLPDAFVAVDGFEIAVPTLRREDLGINNDAVI 530
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
+ S K P ++++ +I+ +VPNS +++ +S+ F ++G+E+ R+
Sbjct: 531 YLSSQTAIKRNPAMIRLQMQIIKSVPNSYFLIQGVA-DDNSLLDLFCQIAAEVGVETNRI 589
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+LPL + ++ D+ LDT+P+ G TTT E+L+MG+P V G + G +L
Sbjct: 590 KMLPL-YQTETYRANLAIADVVLDTYPFNGGTTTLETLWMGIPLVVKVGQQWSSRNGYTL 648
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+ G+ I+ +++EYVQ ++L D +R LR SP+ + + F LE+
Sbjct: 649 MMNAGITEGISWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNAKQFIRDLETA 708
Query: 540 YRNMWHRYCKG 550
YR MW+ YC+
Sbjct: 709 YRQMWNIYCQS 719
>gi|407775319|ref|ZP_11122614.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
protein [Thalassospira profundimaris WP0211]
gi|407281744|gb|EKF07305.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
protein [Thalassospira profundimaris WP0211]
Length = 690
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 230/516 (44%), Gaps = 35/516 (6%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A YQ ALSI + L LG QG+ A +++ A E L +
Sbjct: 194 AQNLYQRALSIDAKYVPGLRGLGQSLAHQGQYAKAIAILKTARRLTKDTVEIDLVLADIT 253
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF--EAHRDWGKRFMR 168
G + I + ++ PD NA + LL + G D +A + W K M
Sbjct: 254 LRCGDLDSTIKTLDTLIETSPD--NATADALLIRAHAKLGTTDGATHSKAAKAWAKHHMP 311
Query: 169 LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
+ ++ ++ NT+ ++ L IG++SP + H+ S + A + + ++ +YSA + D
Sbjct: 312 IAAK-PAFANTRQSDKRLRIGWLSPFFCKHASSSLLSALARHLNRHEIELFLYSATPRPD 370
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
T ++ +VM G WR++ G D ++A +R+DK+DIL+++ G + + A + A
Sbjct: 371 DVTRQW--QVMADG--WREVCGQDPMQIADRIRKDKVDILIDVCGVHPTQPIEVFALKAA 426
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEA-GPV 347
PVQ + TTG+ +DY I + K V P P A GP
Sbjct: 427 PVQASLSAI--TTGMAEMDYLI----------RHKDVFGGSLSDNKMFAERPYPLALGPY 474
Query: 348 CPTPA------------LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKP 395
P + I FG + LA I+ + L +ARIL V NSR+V++ +
Sbjct: 475 LPAELDDALPLAPLPAAVGEEIIRFGCIDRLANISNETLNCFARILNKVSNSRIVIQDEV 534
Query: 396 FCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCE 455
FL Q G++ R+DL + D Y+ +DI L FP E
Sbjct: 535 LEDSYAAKTFLDRARQAGIKRDRLDLAGKVK-PADRAALYAQIDIGLAPFPAISLENYYE 593
Query: 456 SLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRM 515
L+ G+P VT+A +G+++L+ +GL L A+ E YV + LASD+ ALA++R
Sbjct: 594 MLWFGIPFVTLADDRPGSRLGLAVLSDIGLGALSAETEKGYVDKCIMLASDLKALASIRE 653
Query: 516 SLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
++R+ + S A E R MW +C G+
Sbjct: 654 NMRERIRGSRAFHAPAVAAEFEEACREMWQNFCLGN 689
>gi|222148903|ref|YP_002549860.1| hypothetical protein Avi_2579 [Agrobacterium vitis S4]
gi|221735889|gb|ACM36852.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 588
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 190/393 (48%), Gaps = 30/393 (7%)
Query: 188 IGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG-GIW 245
+GY+S D+ H +++ L+ HD + + ++ + IR ++ +++
Sbjct: 206 VGYLSSDFSDQHPTMRLLQSVLLGHDAARFDIHLFCHT----PEDIRGLDRGLRQTYPNL 261
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
DI +D+ +R +DILV+L GHT + + ++ A +QV ++G+P +
Sbjct: 262 HDILRMDDGTARDFIRSFDLDILVDLKGHTKDVRADLINSGLARLQVAYLGFPGSAYGID 321
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLC----YTPSPEAGPVCPTPALTNGFITFG 361
DY I+D + P +K + E L RLPE + Y P P A + F+
Sbjct: 322 CDYVISDLIVTPDSSKPHYHERLCRLPETYQANDNRYRPHPPATSRSLLDLPEDAFV-LA 380
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
SFN + KI+P+ ++WAR+L A+P+S L V C R R + + G+E R
Sbjct: 381 SFNMVRKISPQTARLWARMLDAIPSSILWVLC---AGREQRDRLTAFMTGCGIERSR--- 434
Query: 422 LPLILLNHD----HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
L + H+ D+ LDT+PY G TTT + L+ G+P +T GS A V
Sbjct: 435 --LYFTGAESYAPHIARMQAADLGLDTYPYNGHTTTSDKLWAGLPVITFKGSNFASRVSE 492
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
SLLT +G+ L+A+ D+ V+LA LA D LA LR ++ D +P+ D Q F LE
Sbjct: 493 SLLTALGVPQLVAETPDDMVRLAADLAQDRPRLAALRQTIGDKRLHAPLFDTQRFTRHLE 552
Query: 538 STYRNMWHRYCKG------DVPSL-KRMEMLQQ 563
+ M R G DVP+L R E +Q
Sbjct: 553 RAFELMVEREKAGLEPDHIDVPALPSRQEPFRQ 585
>gi|222149271|ref|YP_002550228.1| hypothetical protein Avi_3091 [Agrobacterium vitis S4]
gi|221736255|gb|ACM37218.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 680
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 151/613 (24%), Positives = 252/613 (41%), Gaps = 68/613 (11%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFN---PHCAEACNNLGVIYKDRDNLDKAVECYQM 57
++ + Y + D A+ Y+ +N P N V + ++ A+ +
Sbjct: 31 LFEVAEQYARAGRVDQAMELYKAWIAYNSAHPLAHMVYFNYSVTLRQLGDMAGAINALRA 90
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAA-------AEM---IEKAIAANPTYAEAYNNLG 107
L I P F + NLG G ++ A AEM I AN ++G
Sbjct: 91 CLKIDPEFGAAHVNLGRSLEDSGLLNDALQQWRSFAEMTTDISPDRLANRIMV--LEHIG 148
Query: 108 VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN----RLLAMNY----------------- 146
+ +AG + A + + +++ PD AGQ+ RL +
Sbjct: 149 RVLENAGLMEEAEASLWKAIELRPDKTEAGQHWSAIRLRQCKWPVLQESPYVTMRQLLDA 208
Query: 147 -----INEGHDDKLFEAHRDW-------GKRFMRLYSQYTSWDNTKDPERPLVIGYVSPD 194
I+ DD LF + + G+ + + T +R L +GY+S D
Sbjct: 209 VSPLTISCYSDDPLFHLAKAYRCNKTMIGRPDLSAVPSQSPRQKTGTGQR-LRVGYLSSD 267
Query: 195 YFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
H+V + + L HD + +V Y + D R ++ V WRDI+ +
Sbjct: 268 LRDHAVGFALREVLELHDKTSIEVFAYYCGEPIALDETQQRIKQAVDG----WRDIFALS 323
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD 312
+ A ++ D+ID+L+++ G+T + + + A +PAPV V + GYP + P Y I D
Sbjct: 324 DVDAARLIAADEIDVLIDVNGYTKHARTRIFAYRPAPVIVNFCGYPGSMASPFHQYMIAD 383
Query: 313 SLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITFGSFNNLA 367
+ PPE + + E+++R+ C P V P P L F FN +
Sbjct: 384 NHIVPPEHEIYYSEKVLRIA----CNQPVDRKRKVAPRPTRAEVGLPEDAFVFACFNGMQ 439
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
KIT W IL A P S L + + V R T + G++ R+ L
Sbjct: 440 KITQSGFTRWMTILQATPGSVLWLLSG---NEEVNQRLRDTATRCGVDPARL-LFAAKAG 495
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH 487
N H+ ++ D+ LDTFPY +T +++ MG+P +T G A S++ G
Sbjct: 496 NAQHLARIAVADLFLDTFPYGAHSTAADAINMGLPVLTFPGKSFASRFCASVVASAGAPE 555
Query: 488 LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
LI ++ D+YV+ A+ A D +LA ++ SL S + D A LE + M
Sbjct: 556 LICQSPDDYVRRAIAFAQDRQSLAAVKESLSRQFETSALRDMPGLARRLEELFWQMQGEC 615
Query: 548 CKGDVPSLKRMEM 560
+G+ P + + M
Sbjct: 616 ERGETPKPELLNM 628
>gi|400754413|ref|YP_006562781.1| hypothetical protein PGA2_c15330 [Phaeobacter gallaeciensis 2.10]
gi|398653566|gb|AFO87536.1| hypothetical protein PGA2_c15330 [Phaeobacter gallaeciensis 2.10]
Length = 552
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 223/504 (44%), Gaps = 44/504 (8%)
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+V + G++ A + E A++ P+ + LG +D G A++ E L ID +S
Sbjct: 53 IVASRPGRIGEAITLQETALSLAPSNSVFIAALGSRLKDGGFDRQALETLETALSIDENS 112
Query: 134 RNA----GQNRLLAMNYINEGHDDKLFEAHRDWGKR------FMRLYSQYTSWDNTK--- 180
A + R + + + + + E+ + G + DN +
Sbjct: 113 PIALPLIMRLRRKFLAWESAAQEQRCLESVKQAGHTPDPLALLTYIDDPQVQLDNARLRA 172
Query: 181 -----------DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
DP + IGY S D++ H + L HD + ++ VY + K +
Sbjct: 173 PKPKRAKPTPHDPGAKIRIGYFSSDFYEHPTMHLFRGALKAHDKEKFEFFVYDLLPKGRS 232
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
+ F V + +RD+ + + +A + DK+DI ++L G T +K + A AP
Sbjct: 233 EESAF---VREFADHYRDVSDLTAEAIANLSVRDKVDIAIDLKGDTFASKQEIFAHGAAP 289
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPS------PE 343
VQV+++G+P TTG+ IDY I D + P ++ + E ++RLP CY P+ PE
Sbjct: 290 VQVSFLGFPGTTGMDMIDYMIADHVTIPEGAERYYSETILRLPN---CYQPNSNCRHVPE 346
Query: 344 AGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC-KPFCCDSVR 402
L F + NN K+ P+ W +IL P S L+ K CD +
Sbjct: 347 VRNTRSDYNLPQDKFVFANLNNTYKVGPREFATWMKILKRTPESVLLFYMGKDDLCDVIA 406
Query: 403 HRFLSTLEQLGLESLRVDLLPL-ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
+ E G++ R+ +P L DH+ + +D+ LD F Y TT ++L+ GV
Sbjct: 407 QK----TEAHGVDPDRI--IPCGALPQADHLDRIAQVDLCLDCFSYNAHTTASDALWAGV 460
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P +T+AG A V S+L+ L L K+E+ ++ A+ LA + + ++ LR+
Sbjct: 461 PILTLAGKQFAARVASSILSAAHLPDLSVKSEELFIDKAVSLAKNPDEMMRIKHHLREQR 520
Query: 522 SKSPVCDGQNFALGLESTYRNMWH 545
P+ D + + E+ ++H
Sbjct: 521 FALPLFDTEAWTRDFENALHQIYH 544
>gi|222147822|ref|YP_002548779.1| hypothetical protein Avi_1086 [Agrobacterium vitis S4]
gi|221734810|gb|ACM35773.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 632
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 184/359 (51%), Gaps = 12/359 (3%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GYVS D + H+ + + HD +++ + K + R++ ++ +
Sbjct: 270 LRVGYVSADLYQHATLSLLTGVIENHDRDRFEIFGICHTAAKNRKGM-LRQRFLEAIDHY 328
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
DI +D+ + AA +R+ +DIL++L G T N+LG+ +PAPVQV ++G+P +
Sbjct: 329 VDILDLDDDQAAAAIRQLDLDILIDLKGFTFENRLGIFCRRPAPVQVAYLGFPGSVVGVG 388
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEA----GPVCPTPALTNGFITFG 361
IDY I DS+ PP + + E++ RLP + C S E GP L + F
Sbjct: 389 IDYAIADSIVAPPSSDPFYAEKIFRLPNSYQCNDNSREKVMRDGPRS-LHGLPEQGVVFC 447
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
SFN KI +V + W IL +V S L ++ P D++R + +LG+ R+
Sbjct: 448 SFNQAVKIRYQVFKTWMEILKSVDGSVLWLIDMLPVTRDNLR----AAAVRLGVAPERLI 503
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
P L+ +H++ DI+LDT P G TTT ++L+ GVP +T G+ A V SLL
Sbjct: 504 FAPKKPLS-EHLRRLPYADIALDTGPCNGHTTTADALWAGVPVLTWKGTNFAGRVSESLL 562
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+ VGL L+A + E+ +LA++LA D ++LR +L +P+ D F E+
Sbjct: 563 SAVGLTELVADDLTEFGRLAVELAQDEVRQSHLRQNLLQARDTAPLFDTPRFTRDFEAA 621
>gi|16127948|ref|NP_422512.1| hypothetical protein CC_3718 [Caulobacter crescentus CB15]
gi|221236770|ref|YP_002519207.1| hypothetical protein CCNA_03834 [Caulobacter crescentus NA1000]
gi|13425486|gb|AAK25680.1| TPR domain protein [Caulobacter crescentus CB15]
gi|220965943|gb|ACL97299.1| tetratricopeptide repeat family protein [Caulobacter crescentus
NA1000]
Length = 596
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 183/377 (48%), Gaps = 24/377 (6%)
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFR 235
W + ER L + Y+S D H+ + + L HD +++ S + +
Sbjct: 238 WPVRRPGER-LRVAYLSSDLHEHATARLLAGVLEAHDRSRFEIFAVSYGPETGGA---MQ 293
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
E++ W + + + ++A R+ +DI V+L G+T + + G++A + AP+QV+W+
Sbjct: 294 ERLRAACEHWIEARRLSDAEIALKCRQQGVDIAVDLKGYTQDGRPGILAHRAAPLQVSWL 353
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA--- 352
GYP T G D + D++ PP + E ++RLP CY P+ V P P+
Sbjct: 354 GYPGTLGA-HADVVLADAVTLPPGAETNWSEAVVRLP----CYQPNDGLTSVIPAPSRAD 408
Query: 353 --LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTL 409
L F FNN AKITP+V W IL A P+S L + P D++R +
Sbjct: 409 MGLPERVRVFCCFNNPAKITPEVFATWMAILRAAPDSVLWLYAGAPGAADNLRGHARAA- 467
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
G+ R+ + + H+ + L D+ LDT+PY TT ++L MGVP +T+ G
Sbjct: 468 ---GVAPERL-VFAEPAPHEAHLARHVLADLVLDTWPYGAHTTASDALRMGVPVLTLPGE 523
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
A VG SL T +G+ LIA + +YV AL +A+D L+ + + + +S + D
Sbjct: 524 SFASRVGASLATAIGMTELIATSRADYVAKALAMAAD----GALKPRVAEAVRRSNLFDP 579
Query: 530 QNFALGLESTYRNMWHR 546
FA LE+ Y + R
Sbjct: 580 VAFARSLETVYAGLVRR 596
>gi|400755802|ref|YP_006564170.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
[Phaeobacter gallaeciensis 2.10]
gi|398654955|gb|AFO88925.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase [Phaeobacter
gallaeciensis 2.10]
Length = 730
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 155/590 (26%), Positives = 243/590 (41%), Gaps = 62/590 (10%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G Y + + A+ Y+ A + C A NNLG D+D + +A +C+ A+ P
Sbjct: 131 MGDVYRRQNRPEDAVALYKKALALDSTCLSALNNLGNTLLDQDRIIEADQCFASAIDQAP 190
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ +Q L N + G + A ++ +A P + EA NL L AG AI
Sbjct: 191 DNAQLLYNRANIQRQLGNLGIARDLYGRAARFAPGFLEARYNLAQLTGMAGDRVEAIRNL 250
Query: 124 EQCLKIDP-DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR----------------- 165
EQ L P D R Q L + + D+ + R G R
Sbjct: 251 EQILLARPNDDRARAQKLRLMADLCDWRWLDEYQDHRRHLGLRGSACAPQAQIGLEDNPD 310
Query: 166 FMRLYSQ-YTSWDNTKDP--ERP--------LVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
+R+ Q + S DP +RP L +GY +++ L HD
Sbjct: 311 LLRIRMQAHASAGLQSDPAPQRPRAETRPPQLRVGYFVSSNQDLDALRLLDSLLARHDQS 370
Query: 215 NYKVVVYSAVV-KADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ + VY+A +AD G + RDI G+ + D++DI ++LT
Sbjct: 371 RFSLYVYTASAPRADLV-----------GVLHRDIRGLSPTTIKTQAVADQLDIAIDLTS 419
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
+T + + + APVQ+ G+P T G P DY + D++ PP +++ E LIRLP
Sbjct: 420 YTQEADATVFSARIAPVQIAMPGFPGTMGTPAYDYIVGDAVTCPPGSERYFEEHLIRLPH 479
Query: 334 CFLCYT-PSPEAGPV-----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
+ + P +G C P F+ F SF ITP+ +W R+L + S
Sbjct: 480 SYQSVSGPQDLSGHQFSRRDCGLP--DEAFV-FCSFTASHAITPREFDIWMRLLTKIDGS 536
Query: 388 RLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLIL----LNHDHMQAYSLMDISLD 443
L + P + L Q + RVD +I + + + D+ LD
Sbjct: 537 VLWLADHP-------EEAQAALRQAAGDR-RVDPDRVIFAAPCTGEERVARSMVADLFLD 588
Query: 444 TFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
+F ++L G+P +TMAG A SLL G++ L Y AL+L
Sbjct: 589 SFTLNAGPAARDALVAGLPVLTMAGRQFAARTTASLLAAAGMEELQTTTPQAYEARALEL 648
Query: 504 ASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
ASD L LR LR + SK+P+ D + + LE ++ R+C +P
Sbjct: 649 ASDRDQLMALRSKLRLMQSKAPLFDTAGYMMDLERGLDMVFARHCDALLP 698
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 30 HCAEACNN----------LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
CAE N+ LG + + LD+A C A + P + + +G VY Q
Sbjct: 79 RCAELLNSHRKSAFLWELLGRCHLAQAALDEAATCLNKACELNPTSATTFAAMGDVYRRQ 138
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ + A + +KA+A + T A NNLG D I A + + PD+ N
Sbjct: 139 NRPEDAVALYKKALALDSTCLSALNNLGNTLLDQDRIIEADQCFASAIDQAPDNAQLLYN 198
Query: 140 R 140
R
Sbjct: 199 R 199
>gi|392384038|ref|YP_005033234.1| putative TPR repeat protein [Azospirillum brasilense Sp245]
gi|356880753|emb|CCD01717.1| putative TPR repeat protein [Azospirillum brasilense Sp245]
Length = 640
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 174/374 (46%), Gaps = 16/374 (4%)
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA-KTIRFREKVMKKGGIW 245
I Y+S D+ H V+ + L HD ++V+ YS D+ + R RE V + +
Sbjct: 271 TIAYLSNDFRQHPVAQLLAEVLALHDRLRFRVLAYSYGPDDDSVERRRIREGVDR----F 326
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
DI + ++ A +R D +DIL++L G+T + + ++A +PAPVQV ++GYP T G P
Sbjct: 327 IDIDSLTAEEAAETMRRDGVDILIDLKGYTGHPRPHILAARPAPVQVQFLGYPGTMGAPW 386
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPS---PEAGP--VCPTPALTNGFITF 360
+DY + D ++ PPE + + E + R+P CFL P A P C PA +GF+
Sbjct: 387 VDYIVADPVSLPPELENRFTEAVARMPRCFLPRDRGHGVPPAPPRSACGLPA--DGFV-L 443
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
FNN KITP++ VW +L +P++ L + L + G+ + R+
Sbjct: 444 ACFNNAYKITPEIWAVWMALLHKIPDAVLWLA---RTTAEAEQNLLRAAQSAGIITDRIV 500
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
DH+ D+ LDT Y TT ++L++G+P VT G V SLL
Sbjct: 501 FASWAPTLGDHLSRLQNADLMLDTLHYGAHTTASDALWVGLPLVTCPGHTLQSRVAASLL 560
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
GL + ++ Y L A++ L +R LR P+ D +
Sbjct: 561 HTAGLPDFVTESLAHYQSAVLHWANNRAGLDAVRDRLRAGRDGGPLFDMNTHTRLFDQAL 620
Query: 541 RNMWHRYCKGDVPS 554
M R +G P+
Sbjct: 621 LTMLERQRQGKPPT 634
>gi|239908057|ref|YP_002954798.1| hypothetical protein DMR_34210 [Desulfovibrio magneticus RS-1]
gi|239797923|dbj|BAH76912.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 672
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 154/594 (25%), Positives = 246/594 (41%), Gaps = 65/594 (10%)
Query: 9 GEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQS 68
G++ + A + + +P N V D + +A + + A+++ P+F +
Sbjct: 34 GQLASVEAAYAAWVASHPQDPLLYAVLFNYSVALTDSGKIVEAQQALEQAIALSPDFMPA 93
Query: 69 LNNLGVVYTVQGKMDAA----AEMIEKAIAANP--------TYAEAYNNLGVLYRDAGSI 116
NLG V QGK+ A + + + A NP T ++ L + +D +
Sbjct: 94 YINLGRVLERQGKIGLAIIQWSAALARMAAVNPSAVSHKVTTLNQSARALEAVSQDDPAE 153
Query: 117 SLAIDAYE------------------QCLK--IDPDSRNAGQNRLLAMNYINEGH--DDK 154
++ ++ E QC ++P R + M+ ++ G DD
Sbjct: 154 TMLRESLELDRDQSEVVQHLVALRQRQCKWPILEPGERFDAGVLVRGMSPLSAGAFTDDP 213
Query: 155 LFE----AH---RDWGKRFMRLYSQYTSWDNT-KDPERPLVIGYVSPDYFTHSVSYFIEA 206
L++ AH D G + T+W ++ + PL +GY+S D H+V Y +
Sbjct: 214 LWQLALAAHYNRTDVGSPAATM----TAWPGAVREGDAPLRVGYLSSDLREHAVGYLMTE 269
Query: 207 PLVYHDYQNYKVV-VYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKI 265
HD +V Y V DA F+ +R I +D+ A ++ +D I
Sbjct: 270 VPGLHDRSRVEVFSYYCGVDSPDAMHAHFQ----AASDHFRVISHLDDAAAAKLMADDGI 325
Query: 266 DILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHV 325
ILV+L G+T + +L ++A +PAP+ V W+GYP T P Y I D PP +
Sbjct: 326 QILVDLNGYTRDARLKLVALRPAPIIVNWLGYPGTMASPYHHYLIADDWIVPPHNEAYFS 385
Query: 326 EELIRLPECFLCYTPS------PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWAR 379
E+++RLP CY PS + P L G + F FN KI W
Sbjct: 386 EKVVRLP----CYQPSNRFRTVADHKPSRAEAGLPEGAMVFCCFNGAHKIHRATFDRWLE 441
Query: 380 ILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMD 439
IL P S L + + V R G+ R+ + N H+ Y L D
Sbjct: 442 ILARAPGSVLWLLGGD---EGVSKRLSDYAAAKGVARERL-VFAKKTANAAHLARYPLAD 497
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
+ LDT PY TT ++L+ GVP +T++G A V SL+ GL L+ + +YV+
Sbjct: 498 LFLDTTPYGAHTTASDALWSGVPVLTVSGRSFASRVCGSLVRAAGLPELVCETTQDYVER 557
Query: 500 ALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A+ +D +LA LR L + D GLE Y MW + +P
Sbjct: 558 AVAYGNDRASLAPLRERLAAGKDSCVLFDMPGLVRGLEDLYEAMWRDHEASRLP 611
>gi|428769583|ref|YP_007161373.1| hypothetical protein Cyan10605_1210 [Cyanobacterium aponinum PCC
10605]
gi|428683862|gb|AFZ53329.1| hypothetical protein Cyan10605_1210 [Cyanobacterium aponinum PCC
10605]
Length = 725
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 192/395 (48%), Gaps = 16/395 (4%)
Query: 164 KRFMRLY-SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYS 222
KR+ L +Q +S N ++ L IG++S + V + Y D Y + +Y
Sbjct: 339 KRYTELLENQLSSTQNNTSVKKKLKIGFLSEALRVNCVGILSRWLIQYIDRDKYDIYIYK 398
Query: 223 AVVKADAKTIR-FREKVMKKGGIWRDIYGIDE-KKVAAMVREDKIDILVELTGHTANNKL 280
+ D T + F+ KV + Y DE K +++D+IDIL+EL T +
Sbjct: 399 IKGREDFFTNQWFKNKVTQ-------YYCFDEIKDTYEQIKKDEIDILMELDSFTHSFTN 451
Query: 281 GMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP 340
+M +PAP+QV+W+G ++TG+P +DY I DS P Q + E++ RLP ++
Sbjct: 452 AVMTLKPAPIQVSWLGL-DSTGIPAVDYFIVDSHVLPENASQYYREKIWRLPHTYIAVDG 510
Query: 341 SPEAGPVCPTPAL--TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC--KPF 396
P +L +N I + S K P+ +++ +IL V +S +V
Sbjct: 511 FEVNTPSLKKESLGISNSAIIYLSLQTGLKRHPEYIRLQMKILRQVADSYFLVSGYKNEL 570
Query: 397 CCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
+++++ F +Q G+ R+ LP + L D+ + D+ LDT+P+ G TTT ++
Sbjct: 571 SMNNIKNLFTQIAQQEGVNPDRIKFLPYMPL-QDYRANLFIGDVVLDTYPFNGATTTLDA 629
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMS 516
L++ +P VT G G + L +G+ +A ++EY+Q ++ +D +
Sbjct: 630 LWLNIPLVTRVGQQFHSRQGYTFLQNLGITEGMAYTDEEYIQWGVKFGTDEELRKKVYWK 689
Query: 517 LRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
L++ SP+ +G+ FA +E Y+ MW Y +G+
Sbjct: 690 LKESKKTSPLWNGKQFAKEMEKAYQQMWAIYLQGN 724
>gi|190890370|ref|YP_001976912.1| hypothetical protein RHECIAT_CH0000745 [Rhizobium etli CIAT 652]
gi|190695649|gb|ACE89734.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 638
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 186/397 (46%), Gaps = 27/397 (6%)
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
+Q +W N + IGY+S D++ H+ ++ L HD ++V ++
Sbjct: 247 NQPHTWSNK------IRIGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGP 297
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
+ ++ + + G DI+G ++ V A+VRE IDI+V+L GHT+ ++ AP
Sbjct: 298 EYLKHNDTDRSRWGRIVDIHGFSDQAVLAIVREHNIDIMVDLKGHTSGSRAAAFNQPLAP 357
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPV 347
V V W+G+P +T +DY I D P K + E+ RLPE + P P+ PV
Sbjct: 358 VHVGWLGFPGSTVNIDLDYVIGDHFVLPEVAKPFYHEKFCRLPESYQPNDPMHRPKPRPV 417
Query: 348 CPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR-- 404
L F SFN KIT +V+ W RIL PNS L + +S R++
Sbjct: 418 TREQLGLPEDAFIFASFNGNRKITHEVVNSWCRILKRAPNSVLWL-----MANSPRNQAN 472
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
+ G+ R+ P + H+ D+ +DTFP G TTT E L+ G+P +
Sbjct: 473 LSKHFQTAGISPKRIIFCPRAPYDQ-HIDRQQAADLGIDTFPVNGHTTTSEQLWGGLPVL 531
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
T G+ A V SLL + L L+A + Y LA++LA + +A + L++ +
Sbjct: 532 TFKGTNFASRVSESLLQAIDLPELVAGDLQAYEDLAVELAQNPGRIAEYKARLKEKRYIA 591
Query: 525 PVCDGQNFALGLESTYRNMWHRYCKG------DVPSL 555
P+ D + F LE Y M R +G D+P+L
Sbjct: 592 PLFDAERFCNHLEQAYEIMADRARQGLAPEHMDIPAL 628
>gi|378824868|ref|YP_005187600.1| hypothetical protein SFHH103_00273 [Sinorhizobium fredii HH103]
gi|365177920|emb|CCE94775.1| conserved hypothetical protein [Sinorhizobium fredii HH103]
Length = 685
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 144/573 (25%), Positives = 233/573 (40%), Gaps = 77/573 (13%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
N V + +L ++ + L ++P F Q NLG G + +AI
Sbjct: 71 NYSVTLRQMGDLAGSIHALRACLKLEPRFGQGHINLGRALEDAG-------LTGQAIQQW 123
Query: 97 PTYAEAYNNL---------------GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN-- 139
YAEA + + G + +AG + A + +++ PD AGQ+
Sbjct: 124 QVYAEATSEITPERVAHRLMVLQHTGRVLENAGLMEEAESTLWKAIELRPDRTEAGQHWT 183
Query: 140 ----------RLLAMNYINEGH--------------DDKLFEAHRDW-------GKRFMR 168
L +++ DD +F+ + + G+ +
Sbjct: 184 SLRQRQCKWPTLAPSEHVSARQLLDALSPLTLACYADDPVFQLAKAYRYCKSLVGRPDLN 243
Query: 169 LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVK 226
+ + + +R L +GYVS D H+V + + HD + ++ Y
Sbjct: 244 GFPKLQPRQKSGTGQR-LRVGYVSSDLRDHAVGFALSEVFETHDRSSVEIYAYYCGEART 302
Query: 227 ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
DA R +M WRDI + + A + D+IDILV++ G+T + + + A +
Sbjct: 303 GDATQTR----MMGAIDCWRDISAVSDSDAAKQIIADEIDILVDVNGYTKHARTRIFAYR 358
Query: 287 PAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP 346
PAPV V++ GYP T G P Y I D PPE + + E+++R+P C P
Sbjct: 359 PAPVIVSFCGYPGTMGSPFHQYVIADEQIIPPENEIYYSEKVLRIP----CNQPVDRKRQ 414
Query: 347 VCPTPALT------NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS 400
+ P +GFI F FN KIT W IL A P S L + +
Sbjct: 415 IASRPGRAEAGLPEDGFI-FACFNGAQKITAACFDRWMAILAATPGSFLWLLGG---GED 470
Query: 401 VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG 460
V R +Q G+ R+ + N H+ L D+ LDTFPY +T ++L MG
Sbjct: 471 VDQRLKQAAQQRGVAPERL-IFASKAPNPKHLARIGLADLFLDTFPYGAHSTAGDALTMG 529
Query: 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDL 520
+P +T G+ A S++ G+ LI D++V+ A+ A D +LAN+R +L
Sbjct: 530 LPVLTFPGNGFASRFCSSIVAAAGVPELICDGPDDFVRKAVGFAKDRQSLANVREALESR 589
Query: 521 MSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
S + D LE + M +G+ P
Sbjct: 590 HDASVLRDIPALVRRLEELFWQMQGECERGETP 622
>gi|428769584|ref|YP_007161374.1| hypothetical protein Cyan10605_1211 [Cyanobacterium aponinum PCC
10605]
gi|428683863|gb|AFZ53330.1| hypothetical protein Cyan10605_1211 [Cyanobacterium aponinum PCC
10605]
Length = 724
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 179/374 (47%), Gaps = 14/374 (3%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKVMKK 241
+ L IGY++ HSV + ++YHD +N+ + +Y + D T + F+ K
Sbjct: 359 KEKLKIGYLAHTLKNHSVGFLSRWLMLYHDKENFDIHLYMNQNREDDITEKWFKPHASKI 418
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+ +D + + + DKI+ILV+L T N+ + +PAP+QVTW+G + T
Sbjct: 419 TKVQKDT-----RSLINAIYNDKINILVDLDSLTLNSSCLVTVAKPAPIQVTWLGM-DAT 472
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFIT 359
G+P IDY I D PP+++Q + E++ RLP +L A P L +
Sbjct: 473 GIPNIDYFIADDYVIPPQSEQHYQEKIWRLPHTYLAVDGFEMANPTLKRADLNIPEFAVI 532
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGLESL 417
F + N AK+ P ++ + +I+ V NS L+ K K D R + ++
Sbjct: 533 FLNVQNSAKLNPHLVNLQMQIISQVENSYLIFKVKQ---DETRLKKYIYECADKFDNIQD 589
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ +P H ++ DI LDT+PY G TTT E+L+ +P VT G A
Sbjct: 590 RLRFIPYDETVELHRANLAIADIFLDTYPYNGATTTLEALWAEIPTVTRVGEQFASRNAY 649
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+ ++ IA ++EY+ ++LA++ ++ LR KSP+ + + F +E
Sbjct: 650 GFMMNTNIQEGIAWTDEEYITWGVKLATNEDLRRDISWKLRQSKRKSPLWNSKQFTKEME 709
Query: 538 STYRNMWHRYCKGD 551
+ Y+ MW Y + +
Sbjct: 710 NAYQQMWQIYLEEN 723
>gi|218437263|ref|YP_002375592.1| hypothetical protein PCC7424_0256 [Cyanothece sp. PCC 7424]
gi|218169991|gb|ACK68724.1| conserved hypothetical protein [Cyanothece sp. PCC 7424]
Length = 719
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 178/369 (48%), Gaps = 15/369 (4%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKVMKKG 242
+PL IGY++ HS+ + Y++ + +++++Y D T + FR +
Sbjct: 359 KPLKIGYIAHTLRRHSIGWLTRWLFHYYNRKAFEIIIYLVNQPEDELTHKWFRANANQ-- 416
Query: 243 GIWRDIYGIDE--KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+Y + + K +A + D I+ILV+L T + +MA +PAP+QVTW+G+ +
Sbjct: 417 -----VYNLSDSPKTIAKKIEGDGINILVDLDSITNSTTYKVMALKPAPIQVTWLGF-DG 470
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFI 358
+GLP IDY I D P + + E++ RLP C++ P L N I
Sbjct: 471 SGLPAIDYYIADRYVLPENAQDYYQEKIWRLPHCYMAVDGFETGVPTLRREDLNIANDAI 530
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
+ S K P +++ +IL VPNS +++ + ++ F +Q G+ R
Sbjct: 531 IYLSTQTGFKRHPDTIRLQMKILKEVPNSYFLIQGLT-DEEKIQQLFTEIAQQEGVNPNR 589
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ LP + ++ D+ LDT+P+ G TTT + L+ G+P VT G A G +
Sbjct: 590 LRFLPY-YPTETYRANLTIADVVLDTYPFNGGTTTLDILWQGIPVVTRVGQQWASRNGYT 648
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
LL G+ IA N+++Y++ +QL +D + LR+ +P+ + + F +E
Sbjct: 649 LLINAGITEGIAWNDEDYIKWGIQLGTDEKLRQQINWKLRNSRKTAPLWNAKQFTQDMEE 708
Query: 539 TYRNMWHRY 547
Y+ MW +
Sbjct: 709 AYQQMWANF 717
>gi|254413207|ref|ZP_05026978.1| hypothetical protein MC7420_694 [Coleofasciculus chthonoplastes PCC
7420]
gi|196179827|gb|EDX74820.1| hypothetical protein MC7420_694 [Coleofasciculus chthonoplastes PCC
7420]
Length = 745
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 175/375 (46%), Gaps = 18/375 (4%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKT------IRFREK 237
+PL IGY+S HSV + YHD ++V Y ++ K + +K
Sbjct: 379 QPLKIGYLSHCLGRHSVGWLARWVFEYHDRNQFEVSAYFINYQSRLKDPLRDWFVEHADK 438
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
K + ++ ++A + +D IDIL++L T + +MA +PAP+QVTW+G+
Sbjct: 439 AHK--------FEMNSLEIAEKIYQDNIDILIDLDSITLDITCEVMALKPAPIQVTWLGW 490
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--N 355
+ +GLP IDY + D P + E + LP ++ P L N
Sbjct: 491 -DASGLPAIDYFMADPYVLPDSAPDYYRETIWHLPNTYIAVDGFEVGVPTLRRDHLDIPN 549
Query: 356 GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
+ + S K P ++ +IL VPNS ++K +SV+ F+ E+ G++
Sbjct: 550 DAVIYLSAQMGHKRHPDTARLQMQILKQVPNSYFLIKGIA-NQESVKKFFIQIAEEEGVD 608
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ LP + L H + D+ LDT+PY G TTT E+L+MG+P VT G +
Sbjct: 609 CQRLRFLPEVALEATHRANLGIADVVLDTYPYNGATTTLETLWMGIPLVTRVGQQFSARN 668
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
+++ G+ IA ++EYV+ ++L D + LR +P+ + + F
Sbjct: 669 SYTMMMNAGITEGIAWTDEEYVEWGVRLGKDEAMRQQIAWKLRQSKQTAPLWNAKQFTRE 728
Query: 536 LESTYRNMWHRYCKG 550
+E Y+ MW Y +G
Sbjct: 729 MEKAYQQMWANYVEG 743
>gi|145590007|ref|YP_001156604.1| hypothetical protein Pnuc_1827 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048413|gb|ABP35040.1| TPR repeat-containing protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 761
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 141/581 (24%), Positives = 254/581 (43%), Gaps = 45/581 (7%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N G+ ++ K D A+ Y A H NP +A N GV+ +A++ + M + +
Sbjct: 179 FNKGIVLTKLNKLDEALNAYISAIHLNPDYLDAWLNRGVVLHALKCYGEAIDAFNMVIKL 238
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PN Q+ N G + + A + +I N Y++A+ N + + +I+
Sbjct: 239 NPNHFQAWFNKGASLKELQRYEEALIAYDNSINLNVEYSDAWVNKAAALHELKRFNESIE 298
Query: 122 AYEQCLKIDP-------------------DSRNAGQNRLLAMNYINEGH----------D 152
AY+ LK++P D + L++ E D
Sbjct: 299 AYQHALKLNPKIDWVEGDLLHTKMKVCLWDDFDESLADLMSKVRTGEKSITPFPLLSLVD 358
Query: 153 DKLFEAH--RDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
D L + + L ++ + ER + IGY S D+ H+VS
Sbjct: 359 DGLLQKQCSTIYANSKFPLNAKLGPLNKLLQKER-IRIGYFSADFRNHAVSALTAQLFEL 417
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
H+ Q ++++ +S D +++ R ++ K + DI + ++A + R+ IDI ++
Sbjct: 418 HNKQKFEIIAFS--YGPDDQSL-MRNRLSKAFDQFLDIGSQSDMQIAKLSRDLGIDIAID 474
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
L G T +++ G+ + + AP+Q +IGY T G +DY D P E +Q + E+++
Sbjct: 475 LGGFTTDSRPGIFSYRAAPIQAGYIGYLGTMGANYMDYLFADKTIIPHEAEQYYSEKIVY 534
Query: 331 LPECFLCYTPSPEAGPVCPTPAL---TNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
LP + T + + +L + F+ F FNN KI P W IL A P S
Sbjct: 535 LPSYQVNDTNRKISDEIFSRESLGLPKDEFV-FACFNNNYKILPATFNSWMNILKATPKS 593
Query: 388 RLVVKC-KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
L + P+ D++ + E G+++ R+ I + ++ Y D+ LDT P
Sbjct: 594 VLYLYADNPWSKDNL----MKEAEARGVKADRLIFGGRIDADQ-YLARYRACDLFLDTAP 648
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
Y TT ++L+ G+P +T+ G V SLL VGL L+ + EY A++LA +
Sbjct: 649 YNAGTTASDALWAGLPVLTLIGQSFPSRVASSLLNAVGLPELVTSSAAEYEIRAIELAMN 708
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
++ +++ L + + + D F +E+ Y M+ Y
Sbjct: 709 PEMMSAIKLKLVNNQLTTLLFDTPRFTESIEAVYTKMYGDY 749
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N + G + ++ A+ + A P+ AEA N G+I + L+ A + A+
Sbjct: 110 LLNYAITLGALASYEEALNVLDKAILIQPNYAEAFLNHGLILAALNRLEDANISFDSAIR 169
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ P+ S+S N G+V T K+D A AI NP Y +A+ N GV+ AI
Sbjct: 170 LNPSSSESCFNKGIVLTKLNKLDEALNAYISAIHLNPDYLDAWLNRGVVLHALKCYGEAI 229
Query: 121 DAYEQCLKIDPDSRNAGQNR 140
DA+ +K++P+ A N+
Sbjct: 230 DAFNMVIKLNPNHFQAWFNK 249
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N G+ + + + A + ++ A NP +E+C N G++ + LD+A+ Y A+ +
Sbjct: 146 NHGLILAALNRLEDANISFDSAIRLNPSSSESCFNKGIVLTKLNKLDEALNAYISAIHLN 205
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P++ + N GVV A + I NP + +A+ N G ++ A+ A
Sbjct: 206 PDYLDAWLNRGVVLHALKCYGEAIDAFNMVIKLNPNHFQAWFNKGASLKELQRYEEALIA 265
Query: 123 YEQCLKIDPDSRNAGQNRLLAMN 145
Y+ + ++ + +A N+ A++
Sbjct: 266 YDNSINLNVEYSDAWVNKAAALH 288
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 68/139 (48%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNL + + F +I ++ A P+ EA N + + ++A+ A+ I
Sbjct: 77 YNLAKSLADCGSFRESIPHHKKAVELMPNNPEALLNYAITLGALASYEEALNVLDKAILI 136
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+PN++++ N G++ +++ A + AI NP+ +E+ N G++ + A++
Sbjct: 137 QPNYAEAFLNHGLILAALNRLEDANISFDSAIRLNPSSSESCFNKGIVLTKLNKLDEALN 196
Query: 122 AYEQCLKIDPDSRNAGQNR 140
AY + ++PD +A NR
Sbjct: 197 AYISAIHLNPDYLDAWLNR 215
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++ LG+ K+ A A NP+ A NL D + +++ ++ A+
Sbjct: 42 LHVLGLIKASQKKYQEAADLLSKAARLNPNEASIQYNLAKSLADCGSFRESIPHHKKAVE 101
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+ PN ++L N + + A +++KAI P YAEA+ N G++ + A
Sbjct: 102 LMPNNPEALLNYAITLGALASYEEALNVLDKAILIQPNYAEAFLNHGLILAALNRLEDAN 161
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
+++ ++++P S + N+ + + +N+
Sbjct: 162 ISFDSAIRLNPSSSESCFNKGIVLTKLNK 190
>gi|443475508|ref|ZP_21065455.1| hypothetical protein Pse7429DRAFT_1126 [Pseudanabaena biceps PCC
7429]
gi|443019627|gb|ELS33688.1| hypothetical protein Pse7429DRAFT_1126 [Pseudanabaena biceps PCC
7429]
Length = 736
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 180/375 (48%), Gaps = 18/375 (4%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVV---KADAKTIRFREKVMK 240
+PL IGY+S HS+ + +HD + +++ Y +D + ++V K
Sbjct: 369 KPLKIGYLSNCLRKHSIGWLARWLFSFHDREQFQIYGYFLNYHQNNSDHLQEWYSKQVYK 428
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
+ + G + + +D IDILV+L T N +++ +PAPVQVTW+G+ +
Sbjct: 429 SYRVGIESIG-STLDICNQISQDGIDILVDLDSLTYMNSCEIVSLKPAPVQVTWLGF-DA 486
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG---- 356
+G+P IDY I D P + + E++ RLP+ ++ G C P +
Sbjct: 487 SGIPAIDYFIADPYVLPESAQTYYSEKIWRLPQTYIAV-----QGFECGVPTIHRSQLDI 541
Query: 357 ---FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
+ + + K P +++ +IL VPNS L++K +S F E G
Sbjct: 542 PEDAVIYFTGQRGYKRHPDNIRLQMKILKNVPNSYLLIKGVS-DANSTEELFFRLAESEG 600
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
++ R+ LPL + +H ++ D+ LDT+PY G TTT E+L+MG+P VT G A
Sbjct: 601 VDCDRLKFLPLTMSELEHRANLTIADVVLDTYPYNGATTTLETLWMGIPIVTRVGEQFAS 660
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+++ GL IA ++EYV+ ++L +D + L++ +P+ + + FA
Sbjct: 661 RNSYTMMLNAGLVEGIAWTDEEYVEWGVKLGTDSQLRLEITWKLKESRKSAPIWNARQFA 720
Query: 534 LGLESTYRNMWHRYC 548
+E Y+ MW Y
Sbjct: 721 KEMEKAYQQMWEIYT 735
>gi|428179062|gb|EKX47935.1| hypothetical protein GUITHDRAFT_54742, partial [Guillardia theta
CCMP2712]
Length = 377
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 182/376 (48%), Gaps = 16/376 (4%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY+S D+ H + I L+ HD + V YS A+++ +R ++ +
Sbjct: 8 LRIGYMSSDFVDHPTADLILRALLLHDKDRFDVYCYSITNHANSE---YRRRLKHHIPNF 64
Query: 246 RDIYGID-EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
+++ D + K A ++ +D I IL+ L GHTA ++ G+ + +PAP+QV ++ YP T+G
Sbjct: 65 KNLAKKDSDDKCAEIIAQDGIHILINLNGHTAGDRNGISSLRPAPIQVVYLAYPGTSGAD 124
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT---PALTNGF---- 357
ID+ + D PPE ++ + E+LIR+P C+ + + V + P + F
Sbjct: 125 YIDFNVVDDHVCPPEHREFYSEKLIRMPHCYQVNSFNDLYQDVLRSETLPKRRDHFLPDK 184
Query: 358 --ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLE 415
+ +F L +I+ ++ W RI+ V S L + P + +R +
Sbjct: 185 PAVVLCNFCRLGRISQELFDAWLRIMRRVEGSILWLYSHP---RAAANRLRDYARRQDFP 241
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
+ R+ P HM+ +L D+ LDT Y G TT + L+ GVP VT+ GS V
Sbjct: 242 TDRIIFAPPCSPKLQHMKRLTLADLYLDTLVYNGHTTASDVLWAGVPIVTVKGSNWPSLV 301
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
SL VGL ++A + +EY ++A+ LAS+ L LR L P+ D + +
Sbjct: 302 ATSLARSVGLPEMVATSLEEYEEMAVDLASNPEKLQGLRSKLCRNRLTQPLFDNERWVRS 361
Query: 536 LESTYRNMWHRYCKGD 551
E+ +W + G+
Sbjct: 362 FENALETIWKTWENGE 377
>gi|375104380|ref|ZP_09750641.1| hypothetical protein BurJ1DRAFT_1023 [Burkholderiales bacterium
JOSHI_001]
gi|374665111|gb|EHR69896.1| hypothetical protein BurJ1DRAFT_1023 [Burkholderiales bacterium
JOSHI_001]
Length = 464
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 181/382 (47%), Gaps = 16/382 (4%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
+ + P + L +GY+S D+ H+ ++ + L HD++ + V +S D +R R +
Sbjct: 88 SDRQPGQRLRVGYLSGDFHQHATAWLMVELLEAHDHRRFDVQAFS-YGPDDGGPLRDRVR 146
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
G + D+ +D+ + A + +DILV+L G+TA + +M + APVQV ++GY
Sbjct: 147 YSVDG--FTDLSTLDDVQAAQRLHAAGLDILVDLKGYTAGTRTALMGWRTAPVQVNYLGY 204
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG--PVCPT---PA 352
P + G DY ++D+ PPE + E L +P Y P AG P T
Sbjct: 205 PGSMGGHICDYLVSDAFVTPPEAAGHYSEALALMPHS---YQPHGHAGALPAATTRQDAG 261
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL 412
L G + +FN K TP+V +W +L P S L + ++R L+
Sbjct: 262 LPEGALVLCNFNQAYKFTPQVFGLWCELLERAPGSVLWLLADEQAQGNLRQEALAR---- 317
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
G+ R+ P L H+ +L D+ LDT PY TT ++L+ GVP +T AG A
Sbjct: 318 GINPHRLVFAP-PLPQAQHLARLALADLVLDTLPYNAHTTASDALWAGVPVLTCAGDTFA 376
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
V SLL VGL L+ D+YV L L + L +R L L + + + + +
Sbjct: 377 ARVAGSLLHAVGLPELVTHRLDDYVALGHALLARPRRLRAVRARLARLRADAALFNVPAY 436
Query: 533 ALGLESTYRNMWHRYCKGDVPS 554
A LES Y MW R+ G P+
Sbjct: 437 ARSLESLYEAMWARHAAGLAPA 458
>gi|154244409|ref|YP_001415367.1| hypothetical protein Xaut_0452 [Xanthobacter autotrophicus Py2]
gi|154158494|gb|ABS65710.1| Tetratricopeptide TPR_2 repeat protein [Xanthobacter autotrophicus
Py2]
Length = 569
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 231/521 (44%), Gaps = 21/521 (4%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
L ++ + D+A+ Y+ A ++KP ++ N G+ T + AE +A+A +P
Sbjct: 50 LAMVRARQHRTDEAIALYRAAAALKPQDAKLWYNFGLACTAVERNREGAEAFARALALDP 109
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDD---K 154
+ E +G+L+ S+ D + I +R R + DD +
Sbjct: 110 SLPE---GMGMLFSARRSVCDWRDDAQLLAAI---ARAGDPARPEIPPFFTLWLDDPALQ 163
Query: 155 LFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
L A R G+R + D + IGY+S D+ H ++ + L HD
Sbjct: 164 LAAARRTVGRRCAGIVPTPLPARAPTDGR--VRIGYLSADFRNHPTTHLLVRLLEVHDRS 221
Query: 215 NYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGH 274
+++ +S + DA R R + I D + AA R IDILV++ GH
Sbjct: 222 KFEITAFS-IGPNDASPARKRVEASVDRFI--DCEREQPLETAARARSLGIDILVDVMGH 278
Query: 275 TANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPEC 334
T N++ + A + APVQV+++GYP T+G +DY I D P E + E++++LP+
Sbjct: 279 TNGNRVEIFAARAAPVQVSYLGYPGTSGADFMDYVIADPFVLPLEDARFFSEKVVQLPDT 338
Query: 335 FLCYTPS--PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
+ P+ A P L + F +FNN K+ P +W R+L VP S L +
Sbjct: 339 YQPNDPTLALAARPGRAECGLPDTGFVFCAFNNTRKLDPATFALWLRLLMEVPGSVLWL- 397
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
D R E G+ R+ P L +H+ +L D+ LDTFPY TT
Sbjct: 398 ---LAGDDARANLRREAEAAGVAPERLVFAPHRPLP-EHLARMALADLFLDTFPYTAHTT 453
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
++L +G+P VT G A V LL G+ L+ Y LAL LA D LA
Sbjct: 454 ASDALRVGLPLVTRTGRSFASKVAGRLLQLSGVGDLVTDTPAAYEALALSLARDPARLAA 513
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
LR L+D +++ + D Q + +E+ Y M R G P
Sbjct: 514 LRARLQDSAARARLFDIQRYRAQIEAAYLAMMERAMAGAAP 554
>gi|209547935|ref|YP_002279852.1| hypothetical protein Rleg2_0327 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533691|gb|ACI53626.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 657
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 175/365 (47%), Gaps = 15/365 (4%)
Query: 188 IGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D++ H+ ++ L HD ++V ++ + ++ + G
Sbjct: 277 IGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGPEYLKHNVTDRSRWGRIV 333
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
D++G ++ V A+VRE IDI+V+L GHT+ ++ APV V W+G+P +T +
Sbjct: 334 DVHGFSDQAVLAVVREHNIDIMVDLKGHTSGSRATAFNLPLAPVHVGWLGFPGSTVNVDL 393
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPVCPTP-ALTNGFITFGSF 363
DY I D P K + E+ RLPE + P P+ PV L F SF
Sbjct: 394 DYVIGDHSVLPEVAKPFYHEKFCRLPESYQPNDPMHRPKPRPVTREQLGLPEEAFIFASF 453
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGLESLRVDL 421
N KITP+V+ W RIL PNS L + +S R++ L + G+ S R+
Sbjct: 454 NGNRKITPEVVNSWCRILKRAPNSVLWL-----MANSPRNQANLLKHFQTAGISSKRIIF 508
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
P H+ D+ +DTFP G TTT E L+ G+P +T+ G+ A V SLL
Sbjct: 509 CPRAPYEQ-HIDRQQAADLGIDTFPVNGHTTTSEQLWGGLPVLTVKGTNFASRVSESLLR 567
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+ L L+A + Y +A++LA + +A + L++ +P+ D + F LE Y
Sbjct: 568 AIDLPELVAGDLQAYEDMAVELAQNPGRIAEYKAHLKEKRYIAPLFDAERFCNHLEQAYE 627
Query: 542 NMWHR 546
M R
Sbjct: 628 IMAER 632
>gi|154245494|ref|YP_001416452.1| hypothetical protein Xaut_1547 [Xanthobacter autotrophicus Py2]
gi|154159579|gb|ABS66795.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
Length = 459
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 18/366 (4%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
+GY+S D+ H+ ++ + L HD ++V YS AD + R ++M + D
Sbjct: 93 LGYLSNDFHEHATAHLLIEVLEAHDRDAFEVHAYS--FGAD-DGLPMRRRLMAACDRFVD 149
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
I + + A ++ +D +DIL++L G T+ + G+ +PAPV V ++GYP T G D
Sbjct: 150 ISAMADNAAAQLIYDDAVDILIDLKGFTSQARSGIALLRPAPVVVNYLGYPGTMGAGICD 209
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL------TNGFITFG 361
Y ITD PP + + E + Y P PV P+ +GF+ F
Sbjct: 210 YVITDPFLTPPASAAFYSEAFAYMRNT---YHPHGRRTPVGDRPSRREAGLPADGFV-FC 265
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
FN KI+P++ +W R+L VP+S L + P ++R ++ G+++ R+ +
Sbjct: 266 CFNQPYKISPQMFDIWCRLLACVPDSVLWLLDTPHAAGNLRSEAIAR----GIDARRL-V 320
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
+ +H++ L D+ LDT P+ TT ++L++G+P VT G V S+L
Sbjct: 321 FGANMGQAEHLRRLQLADLMLDTSPFNAHTTASDALWVGLPFVTCPGDTFPSRVAGSILH 380
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+GL L+ + D Y LA LA+D LA++R L +P+ D + LES Y
Sbjct: 381 AIGLPDLVTDSPDAYFDLAYTLATDEERLADVRARLAANRLTAPLFDVTAYTADLESLYG 440
Query: 542 NMWHRY 547
M R+
Sbjct: 441 AMSARH 446
>gi|410462143|ref|ZP_11315745.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfovibrio magneticus str. Maddingley MBC34]
gi|409984752|gb|EKO41039.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfovibrio magneticus str. Maddingley MBC34]
Length = 672
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 156/596 (26%), Positives = 240/596 (40%), Gaps = 69/596 (11%)
Query: 9 GEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQS 68
G++ + A + + +P N V D + +A + + A+++ P+F +
Sbjct: 34 GQLASVEAAYAAWVASHPQDPLLYAVLFNYSVALTDSGKIVEAQQALEQAIALSPDFMPA 93
Query: 69 LNNLGVVYTVQGKMDAAAEMIEKAIA----ANPT-YAEAYNNLGVLYRDAGSISL---AI 120
NLG V QGK+ A A+A NP+ + L R ++S A
Sbjct: 94 YINLGRVLERQGKIGLAIVQWSAALARMAEVNPSAVSHKVTTLNQSARALEAVSQDDPAE 153
Query: 121 DAYEQCLKIDPDSRNAGQNRLL------------------------AMNYINEGH--DDK 154
+ L++D D Q+ + M+ ++ G DD
Sbjct: 154 TMLRESLELDRDQSEVVQHLVALRQRQCKWPIIEAGERFDAGVLVRGMSPLSAGAFTDDP 213
Query: 155 LFEAHRDWGKRFMRLYSQ---------YTSWDNT-KDPERPLVIGYVSPDYFTHSVSYFI 204
L W Y+Q T+W T ++ + PL +GY+S D H+V Y +
Sbjct: 214 L------WQLALAAHYNQTDVGSPAATMTAWPGTVREGDAPLRVGYLSSDLREHAVGYLM 267
Query: 205 EAPLVYHDYQNYKVV-VYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
HD ++ Y V DA F+ +R I +D+ A ++ +D
Sbjct: 268 TEVPGLHDRSRVEIFSYYCGVDSPDAMHAHFQ----TASDHFRVISHLDDAAAAKLMADD 323
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
I ILV+L G+T + +L ++A +PAPV V W+GYP T P Y I D PP ++
Sbjct: 324 GIQILVDLNGYTRDARLKLVALRPAPVIVNWLGYPGTMASPYHHYLIADDWIVPPGSEAY 383
Query: 324 HVEELIRLPECFLCYTPS------PEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVW 377
E+++RLP CY PS + P L + F FN KI W
Sbjct: 384 FSEKVLRLP----CYQPSNRFRTVADHKPSRAEAGLPEEGMVFCCFNGAHKIHRATFDRW 439
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
IL P S L + + V R E G+ R+ + N H+ Y L
Sbjct: 440 LEILARTPGSVLWLLGGD---EGVSKRLGDYAEAKGIARERL-VFAKKTANAAHLARYPL 495
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
D+ LDT PY TT ++L+ GVP +T++G A V SL+ GL L+ +YV
Sbjct: 496 ADLFLDTTPYGAHTTASDALWSGVPVLTVSGRSFASRVCGSLVRAAGLPELVCATTQDYV 555
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ A+ +D +LA LR L + D GLE Y MW G +P
Sbjct: 556 ERAVAYGNDRASLAPLRERLAAGKDSCMLFDMPGLVRGLEDLYEAMWRDREAGRLP 611
>gi|217978051|ref|YP_002362198.1| hypothetical protein Msil_1891 [Methylocella silvestris BL2]
gi|217503427|gb|ACK50836.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 492
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 170/374 (45%), Gaps = 21/374 (5%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYS-AVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D+ H+ S + HD ++ + A +R R +
Sbjct: 122 IGYLSNDFHDHATSLLLIETFEAHDRARFEAHAFCFGADDGSAMRVRLRGAFHA----FH 177
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
D+ + + + A + + IDIL++L G+T + G++ PAPVQV ++GY T G
Sbjct: 178 DVAALSDAEAAQAIHDAGIDILIDLKGYTKGARSGILLLHPAPVQVNYLGYAGTLGGDLC 237
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN------GFITF 360
DY ITD+ P + E +P Y P G + P GF+ F
Sbjct: 238 DYLITDAHMTPGSAAADYSESFAYMPHS---YQPRGRKGAIGDKPTRAQAGLPEQGFV-F 293
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
FN KITP V +W R+L P S L + ++R L + G+ R+
Sbjct: 294 CCFNQAYKITPAVFDLWRRLLDEFPGSVLWLLRAEQAEGNLRGEAL----RRGVSPDRLI 349
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
P + DH+ L D+ LDT PY TT ++L+ GVP VT AG V SLL
Sbjct: 350 FAP-DMNQVDHLGRLQLADLVLDTSPYGAHTTASDALWAGVPIVTFAGETFPSRVAGSLL 408
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VG+ LIA + +EY+ +A LAS+ LA L+ L+ +P+ D + LE+ +
Sbjct: 409 HAVGMPELIAADAEEYLAIASVLASEPDRLAALKTRLQQARLTAPLFDVGAYTRALEALF 468
Query: 541 RNMWHRYCKGDVPS 554
MW R +G +P+
Sbjct: 469 ETMWSRR-RGGLPA 481
>gi|413936917|gb|AFW71468.1| hypothetical protein ZEAMMB73_864118 [Zea mays]
Length = 517
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 186/434 (42%), Gaps = 68/434 (15%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y E A FY+ A + NNL VIYK + N A+ CY L I
Sbjct: 93 NLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCYTEVLRID 152
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +L N G + G+++ A + +A P EA+ NL Y+D+G + AI +
Sbjct: 153 PTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNMPEAHANLASAYKDSGHVETAIIS 212
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKRFMRL------------ 169
Y+Q L++ PD A N L + + + + D +F + +R +++
Sbjct: 213 YKQALRLRPDFPEATCNLLHTLQCVCDWENRDGMFRDVEEIIRRQIKMSVLPSVQPFHAI 272
Query: 170 ---------------YSQYTSW-----------------DNTKDPERPLVIGYVSPDYFT 197
Y+ + S + L +GYVS D+
Sbjct: 273 AYPIDPLLALEISRKYAAHCSLIASRFGLPPFVHPPPVPVKAEGKHCRLKVGYVSSDFGN 332
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVA 257
H +S+ + + HD N +V Y A+ + D +R+++ + + D+ + +A
Sbjct: 333 HPLSHLMGSVFGMHDRANIEVFCY-ALSQNDGT--EWRQRIQSEAEHFVDVSAMTSDNIA 389
Query: 258 AMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADP 317
++ +DKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD P
Sbjct: 390 KLINQDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGAAYIDYLVTDEFVSP 449
Query: 318 PETKQKHVEELIRLPECFL----------CYTPSPEAGPVCPTPALTNGF----ITFGSF 363
+ E+L+ LP C+ C T PVCP G F F
Sbjct: 450 SSYAHIYSEKLVHLPHCYFVNDYKQKNRDCLT------PVCPHKRSDYGLPEDKFIFACF 503
Query: 364 NNLAKITPKVLQVW 377
N L K+ P++ W
Sbjct: 504 NQLYKMDPEIFDTW 517
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E + DMAI Y A ++P EA NN+G KD +++A+ CY+ L+++
Sbjct: 25 NLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINCYRSCLALQ 84
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N Q+L NLG +Y + AA + AI+ + NNL V+Y+ G+ + AI
Sbjct: 85 ANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC 144
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + +A NR
Sbjct: 145 YTEVLRIDPTAADALVNR 162
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 51 AVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110
A+ CYQ AL +P+++ + NL +Y QG++D A +AI +P + EAYNN+G
Sbjct: 5 AIMCYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNAL 64
Query: 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+DAG + AI+ Y CL + + A N
Sbjct: 65 KDAGRVEEAINCYRSCLALQANHPQALTN 93
>gi|428179024|gb|EKX47897.1| hypothetical protein GUITHDRAFT_69287, partial [Guillardia theta
CCMP2712]
Length = 437
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 211/461 (45%), Gaps = 35/461 (7%)
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLF 156
P +A Y + GV + D G+I +AY +++A + L + DD +
Sbjct: 2 PFHALHYTSSGVSF-DKGTIRRIAEAY---------AKDAKEKALKLIKQKPNKEDDDEY 51
Query: 157 EAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNY 216
A RD + + +++ L IGY+S D+ H + I++ L+ HD +
Sbjct: 52 HAWRD----------EKIILNPSENGIPRLRIGYISSDFVDHPTADLIQSALLLHDDSKF 101
Query: 217 KVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMVREDKIDILVELTGHT 275
++ YS + D +R+ + ++ +R+ D +KK A + ED I ILV L GHT
Sbjct: 102 EIFCYS--ITRDDDNSHYRKTIAQEIEHFRNFSQRDNDKKCAEAIAEDGIHILVNLNGHT 159
Query: 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF 335
A ++ G+ A +PAPVQ+ ++ YP T G ID+ + D P + ++ + E ++ +P C+
Sbjct: 160 AGDRNGISALRPAPVQLVYLAYPGTMGADYIDFNVADRTVCPEKHREFYTERILHMPYCY 219
Query: 336 LCYTPS---PEAGPVCPTPALTNG------FITFGSFNNLAKITPKVLQVWARILCAVPN 386
+ PE P + + F +F L +IT + Q+W IL VPN
Sbjct: 220 QTNSFRHLYPEILDQKNLPTRDDHQLPDHPTVVFCNFCRLGRITADLFQIWMNILRRVPN 279
Query: 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
S + + P + R ++ G+ R+ P +H++ +L D+ LDT
Sbjct: 280 SVIWLYKHP---KAAVPRLQLQAKRSGIPPERLVFGPPCSPKIEHLKRVTLADLCLDTIV 336
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506
Y G TT + L+ GVP VT++G V + VG+ + N EY +LA++L +D
Sbjct: 337 YNGHTTASDMLWAGVPFVTVSGDNWPSLVATCIAKSVGMPEMAVSNLAEYEELAVKLGND 396
Query: 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
L + L+ +P+ D + + ES +W Y
Sbjct: 397 PVMLREWKTKLQANRLSAPLFDPERWIRSFESGLEKVWRLY 437
>gi|241203113|ref|YP_002974209.1| hypothetical protein Rleg_0359 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857003|gb|ACS54670.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 657
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 181/382 (47%), Gaps = 21/382 (5%)
Query: 186 LVIGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
+ IGY+S D++ H+ ++ L HD ++V ++ + ++ + G
Sbjct: 275 IRIGYMSSDFWDRHATMKLLQRILELHDTDRFEVTLF---CHTGPEYLKHNTIDRSRWGR 331
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
++G ++ V VRE IDI+V+L GHT+ ++ APV V W+G+P +T
Sbjct: 332 IVTVHGFSDQAVLEAVREHNIDIMVDLKGHTSGSRATAFNLPLAPVHVGWLGFPGSTVNV 391
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPVCPTP-ALTNGFITFG 361
+DY I D P K + E+ RLPE + P P+ PV L + F
Sbjct: 392 DLDYVIGDHFVLPEVAKPFYHEKFCRLPESYQPNDPMHRPKPRPVTREQLGLPDDAFIFA 451
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGLESLRV 419
SFN KITP+ + W RIL PNS L + ++ R++ L + G+ + R+
Sbjct: 452 SFNGNRKITPETIDSWCRILKRAPNSVLWL-----MANTPRNQANLLKQFQTAGISAKRI 506
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
P H+ DI +DTFP G TTT E L+ G+P +T+ G+ A V SL
Sbjct: 507 IFCPRAPYEQ-HIDRQQAADIGIDTFPVNGHTTTSEQLWGGLPVLTVKGTNFASRVSESL 565
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L + L L+A + Y +A++LA + +A + L++ +P+ D + F LE
Sbjct: 566 LRAIDLPELVAPDLRAYEDMAVELAENPGRIAEYKAHLKEKRYTAPLFDAERFCDHLEQA 625
Query: 540 YRNMWHRYCKG------DVPSL 555
Y+ M R +G D+P+L
Sbjct: 626 YQIMAERAKQGLAPDHMDIPAL 647
>gi|427737301|ref|YP_007056845.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rivularia sp. PCC 7116]
gi|427372342|gb|AFY56298.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rivularia sp. PCC 7116]
Length = 744
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 185/382 (48%), Gaps = 12/382 (3%)
Query: 174 TSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
T+ + K +R L IGY+S + HSV + YH+ ++++ +Y V
Sbjct: 371 TTQSSLKSNQR-LKIGYISSCFRQHSVGWLARWLFEYHNRKDFE--LYGYFVNYQLNNDS 427
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
+E +++ + + GI ++A + D+IDIL++L + + +MA +PA +Q T
Sbjct: 428 LQEWYIEQFDQYYQM-GISSPEIAKQIDRDEIDILIDLDSLSVDITCEVMALKPAKIQAT 486
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL 353
W+G+ + +GLP IDY I DS P + + E++ RLP+ ++ P L
Sbjct: 487 WLGW-DASGLPAIDYFIADSYVLPDNAQDYYSEKIWRLPQSYIAVDGFEVGVPTLKRENL 545
Query: 354 T--NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD--SVRHRFLSTL 409
I + S K P +++ RIL AVPNS L++K D ++++ F
Sbjct: 546 NIPEDAIVYFSGQGGCKRHPDTVRLQMRILKAVPNSYLLIKG---LADEKAIQNFFNEIA 602
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
G+E + LP++ H + D+ LDT+PY G TTT E+L+MG+P VT G
Sbjct: 603 IAEGVEPKYLRFLPMVSSEATHRANLGIADVVLDTYPYNGATTTLETLWMGIPLVTKVGE 662
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
+++ VG+K I+ +++EY++ ++L D ++ L +P+ +
Sbjct: 663 QFVARNSYTMMMNVGIKEGISWSDEEYLEWGIRLGKDAKLRQDIAWKLHQSRQTAPLWNA 722
Query: 530 QNFALGLESTYRNMWHRYCKGD 551
+ F +E Y+ MW Y +
Sbjct: 723 KQFTCEMEKAYQQMWVNYINAE 744
>gi|424873732|ref|ZP_18297394.1| hypothetical protein Rleg5DRAFT_5272 [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169433|gb|EJC69480.1| hypothetical protein Rleg5DRAFT_5272 [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 657
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 185/397 (46%), Gaps = 27/397 (6%)
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
+Q SW + + IGY+S D++ H+ ++ L HD ++V ++
Sbjct: 266 NQPHSWSDK------IRIGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGP 316
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
+ ++ + G ++G ++ V +VRE IDI+V+L GHT+ ++ AP
Sbjct: 317 EYLKHNTIDRSRWGRIVTVHGFSDQAVLEVVREHNIDIMVDLKGHTSGSRATAFNLPLAP 376
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPV 347
V V W+G+P +T +DY I D P K + E+ RLPEC+ P P+ PV
Sbjct: 377 VHVGWLGFPGSTVNVDLDYVIGDHFVLPEVAKPFYHEKFCRLPECYQPNDPMHRPKPRPV 436
Query: 348 CPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR-- 404
L F SFN KITP+ + W RIL PNS L + ++ R++
Sbjct: 437 TREQLGLPEDAFIFASFNGNRKITPETIGSWCRILKRAPNSVLWL-----MANTPRNQAN 491
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
L + G+ R+ P H+ D+ +DTFP G TTT E L+ G+P +
Sbjct: 492 LLKQFQGAGISPKRIIFCPRAPYEQ-HIDRQQAADLGIDTFPVNGHTTTSEQLWGGLPVL 550
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
T+ G+ A V SLL + L L+A + Y +A++LA + +A + L++ +
Sbjct: 551 TVKGTNFASRVSESLLRAIDLPDLVAPDLQAYEDMAVELAENPGRIAEYKAHLKEKRYIA 610
Query: 525 PVCDGQNFALGLESTYRNMWHRYCKG------DVPSL 555
P+ D + F LE Y M R +G D+P+L
Sbjct: 611 PLFDAERFCDHLEKAYEVMAERARQGLAPDHMDIPAL 647
>gi|333981959|ref|YP_004511169.1| hypothetical protein [Methylomonas methanica MC09]
gi|333806000|gb|AEF98669.1| Tetratricopeptide TPR_2 repeat-containing protein [Methylomonas
methanica MC09]
Length = 604
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 254/561 (45%), Gaps = 40/561 (7%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQM--- 57
++NLG A Y A P + NLG+I++ N+D AV ++
Sbjct: 61 LFNLGTVLFNQADLAGAKEVYLQAVKLAPAFVQPHFNLGLIHEREGNIDAAVAEWRWIDD 120
Query: 58 -----ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
AL +P +LNNLG V +A + + +++A + ++ L
Sbjct: 121 HVKPTALEHRPLLLLALNNLGRVLENNKLYGSALDYLTRSLALEAQQPDVIHHWVYLREK 180
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR----DWGKRFMR 168
A Y + P+ + L AM +++ + +L A K R
Sbjct: 181 ----QCAWPVYAPVNGVSPELMRQSTSAL-AMLSLSDDPEAQLAAARHYVEHKLKKNLPR 235
Query: 169 LYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
L + T + + K + IGY S D+ H V+ HD ++V Y +
Sbjct: 236 L-APTTGYGHDK-----IRIGYCSSDFCLHPVAMLTAELFELHDRAQFEVYGYCWTQQGH 289
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
+ R++++ + I + ++ A ++RE +IDILV+L G T + ++A +PA
Sbjct: 290 SP---LRQRIIDAMDHFERIESLTDEAAAKLIREHEIDILVDLHGQTLGARADLLAYRPA 346
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPV- 347
P+Q+T++G P TTGLP+IDY I D P E + E+ + +P+ + + P
Sbjct: 347 PIQITYLGLPATTGLPSIDYVIADRFLIPEEYAHFYSEKPLYMPDVYQVSDRQRKINPAP 406
Query: 348 ----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVR 402
C PA GF+ F SFNN K TP++ + W IL VP+S L ++ P+ ++R
Sbjct: 407 SRESCNLPA--EGFV-FCSFNNNYKYTPELFETWMNILRRVPDSTLWLLADNPWSEINLR 463
Query: 403 HRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVP 462
+ + G++ R+ + + D++ Y++ D+ LD+FP+ TT ++L+MG+P
Sbjct: 464 NH----AKNFGIDPNRL-IFAGRVAPEDYLARYAVADLFLDSFPFNAGTTANDALWMGLP 518
Query: 463 CVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMS 522
+T+ G A + +LLT L LI N +Y A++LA L+ L+ + +
Sbjct: 519 VLTLTGRSFASRMAGALLTAAELPELITYNLLDYENKAVELAQAPDRCTELKAHLQKVRT 578
Query: 523 KSPVCDGQNFALGLESTYRNM 543
+ D FA LE ++ +
Sbjct: 579 DGVLFDTPRFARNLEQHFKRL 599
>gi|428217092|ref|YP_007101557.1| hypothetical protein Pse7367_0829 [Pseudanabaena sp. PCC 7367]
gi|427988874|gb|AFY69129.1| hypothetical protein Pse7367_0829 [Pseudanabaena sp. PCC 7367]
Length = 774
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 181/390 (46%), Gaps = 29/390 (7%)
Query: 177 DNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
D + +R L IGY+S ++ HSV + + HD + + Y + ++ E
Sbjct: 396 DTYRRSDRRLKIGYLSSGFWQHSVGWLARWLIKNHDRDRFDLHGYFLDYRQGQDPLQ--E 453
Query: 237 KVMKK------GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
+K+ G+ D G D ++ + D+IDIL++L T + +MA +PAP+
Sbjct: 454 WYVKQMDHCYLQGV--DGEG-DTLTISNRIFADEIDILIDLDSITLDTTCEIMAMKPAPL 510
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC-- 348
Q TW+G + +GLPTIDY I D + P E Q + E++ RLP F+ A P
Sbjct: 511 QATWLGL-DGSGLPTIDYFIADHYSLPAEADQYYQEKIWRLPHSFIAVDGFEAAVPTIHR 569
Query: 349 -----PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH 403
P A+ G K P LQ I+ AVPNS L +K D+
Sbjct: 570 QDFGIPAEAVVYLTAQVG-----LKRHPDTLQRQLEIIKAVPNSYLAIKG---LADNASM 621
Query: 404 RFLSTLEQLGLESL--RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
L +E R+ LPL +H ++ D+ LDT+PY G TTT E+L+MG+
Sbjct: 622 TKLCQEMAAAMEISYDRLVFLPLSATEAEHRANLTIADVVLDTYPYNGATTTLETLWMGI 681
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P VT G + SL+ G+ IA ++ EYV+ ++L SD+ + LR
Sbjct: 682 PIVTRVGKQFSARNAYSLMVNAGISAGIAWSDREYVEWGIRLGSDLALRQQVCWQLRQSR 741
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
P+ D + F +E+ Y NMW + +GD
Sbjct: 742 HSQPLWDSKQFTRDMEAAYINMWQQKWQGD 771
>gi|425454004|ref|ZP_18833753.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389799815|emb|CCI20675.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 724
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 189/397 (47%), Gaps = 20/397 (5%)
Query: 163 GKRFMRLYS-----QYTSWDNTKD--PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQN 215
G F +Y Q S+D ++ + L IGY++ H V + YH+ +
Sbjct: 330 GSFFQEIYKEMLGFQEESFDKPREDNANKKLKIGYIAQTLKRHPVGLLSRWTINYHNREQ 389
Query: 216 YKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAM--VREDKIDILVELTG 273
+ + +Y D T ++ K IY +A ++ED IDILV+L
Sbjct: 390 FDIHLYMVSQPVDEITQQWFSNPADK------IYHATADSLATYRKIKEDNIDILVDLDS 443
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
T + ++A +PAP+QV W+G+ + +GLP +DY + D P + + E++ RLP
Sbjct: 444 GTGAMVVQVIALKPAPIQVNWLGF-DGSGLPAVDYLLADPYVLPENAPEYYQEKIWRLPH 502
Query: 334 CFLCYTPSPEAGPVCPTPAL--TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV 391
F+ A P L N + + S K P ++++ +I+ +VPNS ++
Sbjct: 503 AFVAVDGFEIAVPTLRREDLGINNDAVIYLSSQTAIKRNPAMIRLQMQIIKSVPNSYFLI 562
Query: 392 KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTT 451
+ +S+ F ++G+E+ R+ +LP I + ++ D+ LDT+P+ G T
Sbjct: 563 QGVA-DDNSLWDLFCQIAAEVGVETNRIKMLP-IYQTETYRANLAIADVVLDTYPFNGGT 620
Query: 452 TTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALA 511
TT E+L+MG+P V G + G +L+ G+ IA +++EYVQ ++L D
Sbjct: 621 TTLETLWMGIPLVVKVGQQWSSRNGYTLMMNAGITEGIAWSDEEYVQWGIKLGLDKNLRE 680
Query: 512 NLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
+R LR SP+ + + F LE+ Y+ MW+ Y
Sbjct: 681 EVRWKLRKSRHTSPLWNAKQFTRDLETAYQQMWNIYS 717
>gi|145588676|ref|YP_001155273.1| hypothetical protein Pnuc_0489 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047082|gb|ABP33709.1| TPR repeat-containing protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 618
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 158/608 (25%), Positives = 264/608 (43%), Gaps = 81/608 (13%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNN----LGVIYKDRDNLDKAVECYQ 56
++ LG+ G + D A+ F+E A P + N L + +D D A+E ++
Sbjct: 35 LHLLGIVCGMQNRPDDALRFFEQALQLTPDNSALHFNTAKALSTLQRDMD----ALEHHR 90
Query: 57 MALSIKP-------NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN---- 105
AL+I P N+ +SL+NL K + A EKA+ P AE + N
Sbjct: 91 KALAIDPDNPEIWLNYGRSLDNLR-------KREEALTCYEKAVVLQPQMAEGWFNKGKI 143
Query: 106 LGVLYRDAGSISLAIDAYEQ------------------CLKIDPD------SRNAGQNRL 141
LG L R A ++ I+AY+ C D D ++ ++L
Sbjct: 144 LGELRRYAEALQSYINAYQLRPTEPFLLGIILHYKMLICDWADLDGIYLKIQQDLHAHQL 203
Query: 142 LAMNYINEG---HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTH 198
+ + +G + L E+ + + K+ + K + I Y+ ++
Sbjct: 204 VVEPFGFQGISTSEQDLLESAKIFAKQRFPARKKAVIQSAPKSKNEKIRIAYLCGEFRDQ 263
Query: 199 SVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAA 258
+ S + HD + +++ D +R R K K I DI + + V +
Sbjct: 264 ATSVLMTGVYESHDPEYFEIYALDNGWD-DGGVLRPRMKKAFKEII--DISQMTDPAVVS 320
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP 318
++ + +IDILV L G+ + + A PAP+QV ++G+P T G +DY I D + P
Sbjct: 321 LIEDLQIDILVNLNGYFGEGRQNIFASHPAPIQVNYLGFPGTLGAEYMDYLIADPIVIPA 380
Query: 319 ETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--------NGFITFGSFNNLAKIT 370
+++Q +VE++ +P + + ++ V T +GF+ + FNN KIT
Sbjct: 381 DSRQYYVEKIAYMPNSY----QANDSKRVISAREFTRAELGLPESGFV-YCCFNNNYKIT 435
Query: 371 PKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLIL 426
P+ W RIL AV S L +++ ++++ L G+ S R+ LPL
Sbjct: 436 PETFDSWMRILKAVEGSVLWLIQDNVPAEENLKAEALKR----GISSDRIIFAQRLPL-- 489
Query: 427 LNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLK 486
+H+ + + D+ LDT PY TT ++L+ GVP +T+ G+ V SLL VGL
Sbjct: 490 --PEHLARHKIADLFLDTLPYNAHTTASDALWAGVPVLTLLGNTFPGRVAASLLNAVGLA 547
Query: 487 HLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
L+ Y Q A++LA D AL ++ L + P+ D F LE Y+ M R
Sbjct: 548 ELVTHTPQAYEQRAIELARDPLALRAIQDRLVENRLTKPLFDTVLFTQDLEVLYKKMVER 607
Query: 547 YCKGDVPS 554
Y P
Sbjct: 608 YRANLAPE 615
>gi|428221015|ref|YP_007105185.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 7502]
gi|427994355|gb|AFY73050.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 7502]
Length = 604
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 190/385 (49%), Gaps = 11/385 (2%)
Query: 168 RLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA 227
R Y +T +RPL IGY+S +HSV + +HD + +K+ Y K
Sbjct: 225 RELESYVHTKSTTLEDRPLKIGYLSHCLRSHSVGWLARWIFQHHDREQFKIYGYFVADKP 284
Query: 228 DAKTIRFREKVMKKGGIWRDIY--GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMAC 285
D IR +K+ +Y G + + +A + +D IDILV+L +T + +MA
Sbjct: 285 DIDAIR--DKIASHCD---QVYQMGFEAEVIAKQINDDDIDILVDLDSNTLDLSCQVMAL 339
Query: 286 QPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG 345
+PAP+QVTW+G + +G+P+IDY I D P + + E++ RLP ++
Sbjct: 340 KPAPIQVTWLGM-DASGVPSIDYFIADPYVLPDHAQDYYAEKIWRLPNTYIAVDGFEVLF 398
Query: 346 PVCPTPALT--NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH 403
P L G I + + + K P +++ +I+ AVP+S L++K ++++
Sbjct: 399 PTIHRSLLDIPEGAIVYFTSQSGYKRHPDTIKLQLQIIKAVPHSFLIIKGTA-NQETLKT 457
Query: 404 RFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC 463
F E++GL+ R+ LP+ +H + D+ LDT+PY G TTT E+L+M +P
Sbjct: 458 LFYEIGEEVGLDRDRLRFLPMTKGVLEHRANLDIADVVLDTYPYNGATTTMETLWMCIPM 517
Query: 464 VTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSK 523
VT G A +++ G+ IA + EYV+ ++L D + L++
Sbjct: 518 VTKVGQQFAARNSYTMMMNAGITEGIAWTDKEYVEWGIRLGRDENLRKQVFWKLKESRKS 577
Query: 524 SPVCDGQNFALGLESTYRNMWHRYC 548
SP+ D + F +E+ Y+ MW YC
Sbjct: 578 SPLWDAKQFTKDMENAYQQMWKIYC 602
>gi|291614668|ref|YP_003524825.1| hypothetical protein Slit_2210 [Sideroxydans lithotrophicus ES-1]
gi|291584780|gb|ADE12438.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
Length = 736
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 181/377 (48%), Gaps = 25/377 (6%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGYVSPD+ +H ++ HD + ++V YS + D +R + + ++R+
Sbjct: 349 IGYVSPDFRSHPIATVTRRLYALHDRERFEVYGYS-LHPGDNSEVR--RDIEQGCDVFRE 405
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
+ G+D++ A + D IDIL++L G+T ++ + A +PAP+Q +++G TTG ID
Sbjct: 406 LSGVDDRAAAETIHRDGIDILIDLAGYTRFSRPEIFAMRPAPLQASYLGMLQTTGADFID 465
Query: 308 YRITDSLADPPETKQKH-VEELIRLPECFLCYTPSPEAGPVCPT------PALTNGFITF 360
Y + D + P T + E++ LP + + + P T PA +GF+ F
Sbjct: 466 YFMADPVVVPAATTARFFAEKIAYLPNSYFLFDNRLQISPQQLTREELGLPA--HGFV-F 522
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
N+ KITP L +W R+L VP S L + V E G+E R
Sbjct: 523 CCHNSSYKITPVDLDIWMRLLKRVPGSVLWLYKS---SAEVEANLRREAESRGVEPHR-- 577
Query: 421 LLPLILLNH----DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
L+ N ++ Y + D+ LDT Y TT E+L+ G+P +T G A V
Sbjct: 578 ---LVFANQAPHATYLARYRMADLFLDTAFYNAQTTAAEALWAGLPVLTCPGVTMASRVA 634
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
LL +GL+ +IA + +Y + A +LA+ LA +R L + + + D + L
Sbjct: 635 SGLLHAIGLEEMIAGSPQQYEECAYRLATHANELAQVRERLANRRLSATLFDTERQVRNL 694
Query: 537 ESTYRNMWHRYCKGDVP 553
ES Y+ MW R+ G P
Sbjct: 695 ESAYQAMWQRHQSGLAP 711
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ Y A H P A+ N+G++ + + + A+E Y +AL P F+ +L N G +
Sbjct: 85 ALSVYRKALHLAPADAQLLLNMGIVLERMGDQNAALERYDLALRHHPEFASALLNRGSML 144
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
G++ A + + + P + A NLG + AYE+ + ++P S A
Sbjct: 145 IRLGRLQDALDNNRRLVGLYPEWEHAQFNLGESLMALSRWEEGLAAYERAVALNPRSAKA 204
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P A A LG + L+ A++ + ALSI+P Q+ G V G+ A
Sbjct: 28 TPRDAHAWFLLGACNHQANRLEAALQALERALSIEPRHIQARCAKGAVLCDLGRSQEALS 87
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR---LLAM 144
+ KA+ P A+ N+G++ G + A++ Y+ L+ P+ +A NR L+ +
Sbjct: 88 VYRKALHLAPADAQLLLNMGIVLERMGDQNAALERYDLALRHHPEFASALLNRGSMLIRL 147
Query: 145 NYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTK 180
+ + D+ RL Y W++ +
Sbjct: 148 GRLQDALDNN------------RRLVGLYPEWEHAQ 171
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N+G+ M + A+ Y+LA +P A A N G + L A++ + +
Sbjct: 103 LLNMGIVLERMGDQNAALERYDLALRHHPEFASALLNRGSMLIRLGRLQDALDNNRRLVG 162
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+ P + + NLG + + E+A+A NP A+A+ + G+
Sbjct: 163 LYPEWEHAQFNLGESLMALSRWEEGLAAYERAVALNPRSAKAHFSAGL 210
>gi|405378056|ref|ZP_11031985.1| hypothetical protein PMI11_01952 [Rhizobium sp. CF142]
gi|397325406|gb|EJJ29742.1| hypothetical protein PMI11_01952 [Rhizobium sp. CF142]
Length = 639
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 183/387 (47%), Gaps = 35/387 (9%)
Query: 188 IGYVSPDYFT-HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D + H+ ++ L HD +++ ++ D F EK + W
Sbjct: 258 IGYMSSDLWDGHATMKLLQRVLELHDRNRFEITLF------DHTQPEFLEKNVTDRSRWG 311
Query: 247 ---DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
D YG+ + V VR + IDI+V+L GHT+ ++ AP+QV W+G+P +T
Sbjct: 312 KIVDTYGLSDAAVLNAVRAENIDIMVDLKGHTSGSRASSFNQPLAPIQVAWLGFPGSTLN 371
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT-------NG 356
+DY I D P K + E+ +RLPE Y P+ A P P N
Sbjct: 372 IDLDYVIGDHSVLPDVAKPFYHEKFLRLPES---YQPNDPANRPRPQPVTREQLGLPENT 428
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGL 414
FI F SFN KIT +V+ W+RIL P+S L + ++ R++ L + G+
Sbjct: 429 FI-FASFNGNRKITSQVVDSWSRILKRAPDSVLWL-----MANTTRNKENLLERFQANGI 482
Query: 415 ESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHN 474
+ R+ P H+ D+ +DTFP G TTT E L+ G+P +T+ G+ A
Sbjct: 483 SAKRIIFCPRAPYEQ-HISRQQAADLGIDTFPVNGHTTTSEQLWGGLPVLTVKGTNFASR 541
Query: 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFAL 534
V SLL + L L+A + Y LA++LA + +A + L++ +P+ D + F
Sbjct: 542 VSESLLRAIDLPELVADDLQAYEDLAVELALNPERIAGYKEHLQEKRYIAPLFDAERFCH 601
Query: 535 GLESTYRNMWHRYCKG------DVPSL 555
LE Y + R +G DVP+L
Sbjct: 602 HLEHAYELIADRAKQGLDPDHLDVPAL 628
>gi|424880058|ref|ZP_18303690.1| hypothetical protein Rleg8DRAFT_1588 [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516421|gb|EIW41153.1| hypothetical protein Rleg8DRAFT_1588 [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 638
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 187/397 (47%), Gaps = 27/397 (6%)
Query: 171 SQYTSWDNTKDPERPLVIGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
+Q SW + + IGY+S D++ H+ ++ L HD ++V ++
Sbjct: 247 NQTHSWSDK------IRIGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGP 297
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
+ ++ + G ++G ++ V +VRE IDI+V+L GHT+ ++ AP
Sbjct: 298 EYLKHNTIDRSRWGRIVTVHGFSDQAVLEVVREHNIDIMVDLKGHTSGSRASAFNLPLAP 357
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPV 347
V V W+G+P +T +DY I D P K + E+ RLPE + P P+ PV
Sbjct: 358 VHVGWLGFPGSTVNIDLDYVIGDHSVLPEVAKPFYHEKFCRLPESYQPNDPMHRPKPRPV 417
Query: 348 CPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR-- 404
L + F SFN KITP+ + W RIL PNS L + ++ R++
Sbjct: 418 TRQQLGLPDDAFIFASFNGNRKITPETIGSWCRILKRAPNSVLWL-----MANTPRNQAN 472
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
L + G+ + R+ P +H+ DI +DTFP G TTT E L+ G+P +
Sbjct: 473 LLKQFQAAGISAKRIIFCPRAPYE-EHIDRQQAADIGIDTFPVNGHTTTSEQLWGGLPVL 531
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
T+ G+ A V SLL + L L+A + Y +A++LA + +A + L++ +
Sbjct: 532 TVKGTNFASRVSESLLRAIDLPDLVADDLQAYEDMAVELAENPGRIAEYKAHLKEKRYIA 591
Query: 525 PVCDGQNFALGLESTYRNMWHRYCKG------DVPSL 555
P+ D + F LE Y M R +G D+P+L
Sbjct: 592 PLFDAERFCDHLEQAYEIMAERAKQGLAPDHMDIPAL 628
>gi|424888611|ref|ZP_18312214.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393174160|gb|EJC74204.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 677
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 177/374 (47%), Gaps = 15/374 (4%)
Query: 186 LVIGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
+ IGY+S D++ H+ ++ L HD ++V ++ + ++ + G
Sbjct: 295 IRIGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGPEYLKHNVTDRSRWGR 351
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
D++G ++ V A+VRE IDI+V+L GHT+ ++ APV V W+G+P +T
Sbjct: 352 IVDVHGFSDQAVLAVVREHNIDIMVDLKGHTSGSRATAFNLPLAPVHVGWLGFPGSTVNI 411
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPVCPTP-ALTNGFITFG 361
+DY I D P K + E+ RLPE + P P+ PV L F
Sbjct: 412 DLDYVIGDHSVLPEVAKPFYHEKFCRLPESYQPNDPMHRPKPRPVTREQLGLPEETFIFA 471
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGLESLRV 419
SFN KITP+ + W RIL PNS L + ++ R++ L + G+ R+
Sbjct: 472 SFNGNRKITPETIDSWCRILKRAPNSVLWL-----MANTPRNQANLLKQFQTAGISPKRI 526
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
P H+ D+ +DTFP G TTT E L+ G+P +T+ G+ A V SL
Sbjct: 527 IFCPRAPYEQ-HIDRQQAADLGIDTFPVNGHTTTSEQLWGGLPVLTVKGTNFASRVSESL 585
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L + L L+A + Y +A++LA + +A + L++ +P+ D + F LE
Sbjct: 586 LRAIDLPDLVASDLQAYEDMAVELAENPGRIAEYKAHLKEKRYIAPLFDAERFCNHLEQA 645
Query: 540 YRNMWHRYCKGDVP 553
Y M R +G P
Sbjct: 646 YEIMAARAKQGLAP 659
>gi|424915500|ref|ZP_18338864.1| hypothetical protein Rleg9DRAFT_3046 [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392851676|gb|EJB04197.1| hypothetical protein Rleg9DRAFT_3046 [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 657
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 174/365 (47%), Gaps = 15/365 (4%)
Query: 188 IGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D++ H+ ++ L HD ++V ++ + ++ + G
Sbjct: 277 IGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGPEYLKHNVTDRSRWGRIV 333
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
D++G ++ V A+VRE IDI+V+L GHT+ ++ APV V W+G+P +T +
Sbjct: 334 DVHGFSDQAVLAVVREHNIDIMVDLKGHTSGSRATAFNLPLAPVHVGWLGFPGSTVNIDL 393
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPVCPTP-ALTNGFITFGSF 363
DY I D P K + E+ RLPE + P P+ P+ L F SF
Sbjct: 394 DYVIGDHSVLPEVAKPFYHEKFCRLPESYQPNDPMHRPKPRPITREQLGLPEEAFIFASF 453
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGLESLRVDL 421
N KITP+V+ W RIL PNS L + +S R++ L + G+ R+
Sbjct: 454 NGNRKITPEVVNSWCRILKRAPNSVLWL-----MANSPRNQANLLKHFQTAGISPKRIIF 508
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
P +H+ D+ +DTFP G TTT E L+ G+P +T G+ A V SLL
Sbjct: 509 CPRAPYE-EHIDRQQAADLGIDTFPVNGHTTTSEQLWGGLPVLTFKGTNFASRVSESLLR 567
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+ L L+A + Y +A++LA + +A + L++ +P+ D + F LE Y
Sbjct: 568 AIDLPDLVASDLQAYEDMAVELAQNPGRIAEYKAHLKEKRYIAPLFDAERFCNHLEQAYE 627
Query: 542 NMWHR 546
M R
Sbjct: 628 IMAER 632
>gi|427707007|ref|YP_007049384.1| hypothetical protein Nos7107_1593 [Nostoc sp. PCC 7107]
gi|427359512|gb|AFY42234.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 739
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 24/376 (6%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKT-------IRFR 235
++ L IGY+S + +HSV + L YHD +++ Y V +D + I
Sbjct: 376 QKKLKIGYISHCFKSHSVGWLARWLLQYHDRDKFEINGY--FVNSDNVSDLLHQWYINQM 433
Query: 236 EKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWI 295
+KV K +W +A + +D+IDIL++L T + +M +PAP+QVTW+
Sbjct: 434 DKVFKSYNVW---------SLAEEIYQDEIDILIDLDSITLDITCEVMTFKPAPIQVTWL 484
Query: 296 GYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT- 354
G+ + +G P+IDY I D ++ + E++ RLP+ ++ P L
Sbjct: 485 GW-DASGSPSIDYFIADPYVLSESAQEHYQEKIWRLPQTYIAVDGFEVNVPKVRRDELDI 543
Query: 355 -NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL-EQL 412
N + + S K P + ++ +IL VPNS ++K + H+F + + ++
Sbjct: 544 PNDAVVYFSGQRGFKRHPDITRLQLKILKEVPNSYFLIKG--LADEESTHKFFAQIAKEE 601
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
++ R+ L H + DI LDT+PY G TTT E+L+M +P VT G A
Sbjct: 602 EVDYARLRFLADAPTEGVHRANLDIADIVLDTYPYNGATTTLETLWMCIPMVTRVGEQFA 661
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
+++ G+ IA ++EYV+ ++L D + LR SP+ +G+ F
Sbjct: 662 ARNSYTMMMNAGISEGIAWTDEEYVEWGIRLGKDADLRQQIAWKLRQSRKTSPLWNGKQF 721
Query: 533 ALGLESTYRNMWHRYC 548
A +E Y MW +Y
Sbjct: 722 AREMEKAYEQMWQKYT 737
>gi|383757802|ref|YP_005436787.1| TPR repeat protein [Rubrivivax gelatinosus IL144]
gi|381378471|dbj|BAL95288.1| TPR repeat protein [Rubrivivax gelatinosus IL144]
Length = 639
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 177/366 (48%), Gaps = 15/366 (4%)
Query: 190 YVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIY 249
Y+S D+ H+ + + L D + ++V Y+ + +++++ D+
Sbjct: 275 YLSSDFHNHATALLMVGLLECRDRERFEVFAYTHSAPDGSP---LQQRLLAACDQVVDVA 331
Query: 250 GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR 309
+ + +VA +R D +DI V+L GHT ++ + A +PAPVQV+++GYP +TG +DY
Sbjct: 332 RLSDTEVAERMRRDGVDIGVDLKGHTRGTRMTVFAQRPAPVQVSFLGYPGSTGADYLDYV 391
Query: 310 ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITFGSFN 364
I D + P + E + ++P CY P+ + P P L + FN
Sbjct: 392 IGDPVVTPLAHAADYSECIAQMPH---CYQPNDHRRALPPAPPRAELGLPEDALVLCCFN 448
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
KITP+VL +WAR+L +P + V+ + D R R L+ LE LG+ + RV
Sbjct: 449 QSYKITPEVLALWARVLHELPQA--VLWLLAWNADGQR-RLLAALEALGIGAERVVFAER 505
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
+ ++ H+ D+ LDT+PY TT ESL+ VP +T+ G A V SL+ G
Sbjct: 506 LPVDQ-HIARLRAADLFLDTWPYNAHTTASESLWAAVPVLTVPGETFASRVAASLVAACG 564
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
L L + ++YV+ A++L L LR L + P+ D + + E+ M
Sbjct: 565 LPELACADAEDYVRTAVELGRSPERLQALRCHLDARRAGLPLFDTERYTRDYEALLLRMH 624
Query: 545 HRYCKG 550
R +G
Sbjct: 625 ERRLQG 630
>gi|428313126|ref|YP_007124103.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Microcoleus sp. PCC 7113]
gi|428254738|gb|AFZ20697.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Microcoleus sp. PCC 7113]
Length = 742
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 178/371 (47%), Gaps = 18/371 (4%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA--DAKTIRFREKV--M 239
+PL IGY+S + +HSV + +H+ + + + Y + D + + ++ +
Sbjct: 374 KPLKIGYLSYCFRSHSVGWLARWVFQHHNRERFDLYGYFVICDPPNDPLHLWYVNQIPNV 433
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
K +R+I A + +D+IDIL++L T + ++A +PAPVQV+W+G+ +
Sbjct: 434 FKSNSYREI--------AEQIYQDEIDILIDLDSITLDTSCLVVARKPAPVQVSWLGW-D 484
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL---TNG 356
+G+P IDY + D P ++ + E++ RLP ++ P L ++
Sbjct: 485 ASGIPAIDYFLGDPYILPESAQEYYTEKIWRLPHTYIAVDGFEVNVPTLRRDQLDIPSDA 544
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
I F S K P ++ +IL VPNS ++K +++ F E G+ES
Sbjct: 545 VIYFSSQRGF-KRHPDTARLQMQILKEVPNSYFLIKGGA-DEEAIEAFFKELAEAEGVES 602
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ LP + H + D+ LDT+PY G TTT E+L+MGVP VT G A
Sbjct: 603 DRLRFLPGVFSEATHRANLGIADVVLDTYPYNGATTTLETLWMGVPLVTRVGEQFAARNS 662
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+++ G+ IA ++EYV+ ++L D + LR SP+ + + F L
Sbjct: 663 YTMMMNAGITEGIAWTDEEYVEWGIRLGKDELLRQQIVWKLRKSRQTSPLWNAKQFTRDL 722
Query: 537 ESTYRNMWHRY 547
E Y MW RY
Sbjct: 723 EDAYEQMWQRY 733
>gi|425472063|ref|ZP_18850914.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389881954|emb|CCI37543.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 712
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 184/379 (48%), Gaps = 27/379 (7%)
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FRE 236
N K E+ L IGY++ HSV++ + +HD + ++ +Y+ + D T + FR+
Sbjct: 346 NEKASEK-LTIGYLASTLKHHSVAWLSRWLIHHHDREKLQIAIYTINQEEDEITRQWFRD 404
Query: 237 KVMKKGGIWRDI-----YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQ 291
RDI Y + +VA +++D+IDILV+L T N +MA +PA Q
Sbjct: 405 S--------RDIIRHFPYAQNPLEVAQQIQQDRIDILVDLDSLTHNFTNQIMALKPAAKQ 456
Query: 292 VTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY------TPSPEAG 345
VTW+G+ + +GL TIDY I D P + ++ + E++ RLPE +L TP+
Sbjct: 457 VTWLGW-DASGLATIDYYIADPYVLPQQAEEYYREKIYRLPETYLAVDGFEIGTPNLRRE 515
Query: 346 PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRF 405
+ P T F S N K P +++ +IL VPNS ++K + ++ F
Sbjct: 516 DLEIPPDATIYF----SVQNGMKRHPDTIKLQMKILAQVPNSYFLIKGVG-KTEKIQELF 570
Query: 406 LSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVT 465
+ G+ R+ LP + + H + D+ LDT+PY G TTT E L+ G+P VT
Sbjct: 571 TEIAIREGVNPQRLRFLPRDIDEYTHRANLQIADVVLDTYPYNGATTTLEVLWQGIPLVT 630
Query: 466 MAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
+ G + + G++ I NE EY+ ++L D + ++ L +P
Sbjct: 631 LVGEQFYARNSYTFMINAGIEAGIGWNEVEYIHWGVKLGLDRSFRQDISHQLLGNRDTAP 690
Query: 526 VCDGQNFALGLESTYRNMW 544
+ G+ FA +E+ Y +W
Sbjct: 691 LWQGKKFAQNMENAYLKIW 709
>gi|399991359|ref|YP_006571599.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
[Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
gi|398655914|gb|AFO89880.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 730
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 154/590 (26%), Positives = 241/590 (40%), Gaps = 62/590 (10%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G Y + + A+ Y+ A + C A NNLG D+D + +A +C+ A+ P
Sbjct: 131 MGDVYRRQNRPEDAVALYKKALALDSTCLSALNNLGNTLLDQDRIIEADQCFASAIDQAP 190
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+ +Q L N + G + A ++ +A P + EA NL L AG AI
Sbjct: 191 DNAQLLYNRANIQRQLGNLGIARDLYGRAARFAPGFLEARYNLAQLTGMAGDRVEAIRNL 250
Query: 124 EQCLKIDP-DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR----------------- 165
EQ L P D R Q L + + D+ + R G R
Sbjct: 251 EQILLARPNDDRARAQKLRLMADLCDWRWLDEYQDHRRHLGLRGSACAPQAQIGLEDNPD 310
Query: 166 FMRLYSQ-YTSWDNTKDP--ERP--------LVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
+R+ Q + S DP +RP L +GY +++ L HD
Sbjct: 311 LLRIRMQAHASAGLQSDPAPQRPRAETRPPQLRVGYFVSSNQDLDALRLLDSLLARHDQS 370
Query: 215 NYKVVVYSAVV-KADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+ + VY+A +AD G + RDI G+ + D++DI ++LT
Sbjct: 371 RFSLYVYTASAPRADLV-----------GVLHRDIRGLSPTTIKTQAVADQLDIAIDLTS 419
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
+T + + + APVQ+ G+P T G P DY + D++ PP +++ E LIRLP
Sbjct: 420 YTQEADATVFSARIAPVQIAMPGFPGTMGTPAYDYIVGDAVTCPPGSERYFEEHLIRLPH 479
Query: 334 CFLCYT-PSPEAGPV-----CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNS 387
+ + P +G C P F+ F SF ITP+ +W R+L + S
Sbjct: 480 SYQSVSGPQDLSGHQFSRRDCGLP--DEAFV-FCSFTAGHAITPREFDIWMRLLTKIDGS 536
Query: 388 RLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLIL----LNHDHMQAYSLMDISLD 443
L + P + L Q + RVD +I + M + D+ LD
Sbjct: 537 VLWLADHP-------EEAQAALRQAAGDH-RVDPDRVIFAAPCTGEERMARSMVADLFLD 588
Query: 444 TFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQL 503
+F ++L G+P +TMAG A SLL G++ L Y AL+L
Sbjct: 589 SFTLNAGPAARDALVAGLPVLTMAGRQFAARTTASLLAAAGMEELQTTTPQAYEARALEL 648
Query: 504 ASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A D L LR LR + SK+P+ + + LE ++ R+C +P
Sbjct: 649 AGDRDQLMALRSKLRLMQSKAPLFNTAGYMQDLERGLDIVFARHCDALLP 698
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 30 HCAEACNN----------LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
CAE N+ LG + + LD+A C A + P + + +G VY Q
Sbjct: 79 RCAELLNSHRKSAFLWELLGRCHLAQAALDEAATCLNKACELNPTSATTFAAMGDVYRRQ 138
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ + A + +KA+A + T A NNLG D I A + + PD+ N
Sbjct: 139 NRPEDAVALYKKALALDSTCLSALNNLGNTLLDQDRIIEADQCFASAIDQAPDNAQLLYN 198
Query: 140 R 140
R
Sbjct: 199 R 199
>gi|220906370|ref|YP_002481681.1| hypothetical protein Cyan7425_0934 [Cyanothece sp. PCC 7425]
gi|219862981|gb|ACL43320.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425]
Length = 739
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 182/374 (48%), Gaps = 20/374 (5%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY-SAVVKADAKTIRFREKVMKK 241
+RPL IGY+S + H++ + Y D +N+++ Y + + DA R K
Sbjct: 373 DRPLKIGYLSDNLRRHAIGWLAWGLYEYCDRENFQLYTYFTGNLAIDADHWRLWYAQHSK 432
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
I ++ +A + +D+IDILV+L T + ++A +PAP+QV+W+G+ + +
Sbjct: 433 QYC---IGNLNSYSLADQIDQDEIDILVDLDSVTLDINCEVLALKPAPIQVSWLGF-DGS 488
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN------ 355
GLP +DY I D P + + + E L RLP+ +L G + +P L
Sbjct: 489 GLPAVDYYIVDPYVLPEQAQAYYSETLWRLPQTYLAVN-----GFLVGSPTLRREDLGIP 543
Query: 356 -GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD-SVRHRFLSTLEQLG 413
+ + S AK P + Q+ +IL +PNS L++K F S++ F + G
Sbjct: 544 ADAVIYLSSQRAAKRNPHLTQLQMQILQEMPNSYLLIKG--FANQKSLQVWFEQIAAEAG 601
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
+ S R+ +P + H + D+ LDT+PY G TTT E+L+M +P VT G A
Sbjct: 602 VSSDRLRFVPSCPSDEQHRANLRIADVVLDTYPYNGATTTLETLWMEIPLVTRVGEQFAA 661
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
+ L G++ IA ++ EYV+ ++L + + + LR SP+ + + F
Sbjct: 662 RNSYTFLVNAGVEEGIAWSDAEYVEWGVRLGKEPELRDRVALKLRAAKKNSPLWNARQFT 721
Query: 534 LGLESTYRNMWHRY 547
+E+ Y+ MW Y
Sbjct: 722 HHMEAAYQQMWQIY 735
>gi|399992733|ref|YP_006572973.1| hypothetical protein PGA1_c15440 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398657288|gb|AFO91254.1| hypothetical protein PGA1_c15440 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 552
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 220/503 (43%), Gaps = 42/503 (8%)
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
+V + ++ A + E A++ P+ + LG +D G A++ E L ID +S
Sbjct: 53 IVASRPDRIGEAITLQETALSLAPSNSVFIAALGSRLKDGGFDRQALETLETALSIDENS 112
Query: 134 RNA----GQNRLLAMNYINEGHDDKLFEAHRDWGKR------FMRLYSQYTSWDNTK--- 180
A + R + + + + + E+ + G L DN +
Sbjct: 113 PIALPLIMRLRRKFLAWESAAQEQRCLESVKQAGHTPDPLALLTYLDDPQVQLDNARLRA 172
Query: 181 -----------DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
DP + IGY S D++ H + L HD + ++ VY + K +
Sbjct: 173 PKPKRAKPTPHDPGAKIRIGYFSSDFYEHPTMHLFRGALKAHDREKFEFFVYDLLPKDRS 232
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
+ F V + +RD+ + + +A + DK+DI ++L G T +K + A AP
Sbjct: 233 EESAF---VREFADHYRDVSDLTAEAIANLSVRDKVDIAIDLKGDTFASKQEIFAHGAAP 289
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPS------PE 343
VQV+++G+P TTG+ IDY I D + P ++ + E ++RLP CY P+ PE
Sbjct: 290 VQVSFLGFPGTTGMDMIDYMIADHVTIPEGAERYYSETILRLPN---CYQPNSNCRHVPE 346
Query: 344 AGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH 403
L F + NN K+ P+ W +IL P+S L+ D +
Sbjct: 347 VRNTRSDYNLPQDKFVFANLNNTYKVGPREFATWMKILKRTPDSVLLFYMGK---DDLSD 403
Query: 404 RFLSTLEQLGLESLRVDLLPL-ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVP 462
E G++ R+ +P L DH+ + +D+ LD F Y TT ++L+ GVP
Sbjct: 404 VIAQKTEAHGVDPDRI--IPCGALPQADHLDRIAQVDLCLDCFSYNAHTTASDALWAGVP 461
Query: 463 CVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMS 522
+T+AG A V S+L+ L L K+E+ ++ A+ LA + + ++ LR+
Sbjct: 462 ILTLAGKQFAARVASSILSAAHLPDLSVKSEELFIDKAVSLAKNPDEMMRIKHHLREQRF 521
Query: 523 KSPVCDGQNFALGLESTYRNMWH 545
P+ D + + E+ ++H
Sbjct: 522 ALPLFDTEAWTRDFENALHQIYH 544
>gi|300869150|ref|ZP_07113747.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
gi|300332849|emb|CBN58945.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
Length = 746
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 172/373 (46%), Gaps = 15/373 (4%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR--FREKVMKK 241
+PL IGY+S HSV + +HD +++ Y K + ++ + V K
Sbjct: 383 KPLKIGYLSHCLRRHSVGWLARWLFQHHDRDRFQIHGYFIGYKEEEHFLQNWYVNHVDKP 442
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
GI +A + +D+IDIL+EL T + +MA + AP+QVTW+G+ +
Sbjct: 443 YRC-----GIVSTNIAEQIDKDEIDILIELDSITLDVNCEVMAMKSAPIQVTWLGW-DAV 496
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL---TNGFI 358
GLP IDY I D P + + E++ RLP+ ++ P L +N I
Sbjct: 497 GLPAIDYFIADPYVVPESAQDYYSEKIWRLPQTYIAVDGFEVGVPTLRRDRLNIPSNAVI 556
Query: 359 TFGSFNNLAK-ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
S + + LQV +IL VPNS ++K +S++ F E+ GLE
Sbjct: 557 YLSSQTGYKRHLDTARLQV--KILKEVPNSYFLIKGGA-DQNSIKKLFNQLAEEEGLEGD 613
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ LP + H + D+ LDT+PY G TTT E+L+M +P VT G A
Sbjct: 614 RLRFLPAVSSEEVHRANLGIADVVLDTYPYNGATTTLETLWMCIPLVTRVGQQFAARNSY 673
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+++ G+ IA ++EY++ ++L D + LR SP+ + Q F +E
Sbjct: 674 TMMMNAGVTEGIAWTDEEYIEWGIRLGKDAALRQQISWKLRQSRQTSPLWNAQEFTREME 733
Query: 538 STYRNMWHRYCKG 550
Y MW Y +
Sbjct: 734 KAYEQMWEIYLQS 746
>gi|334118799|ref|ZP_08492887.1| hypothetical protein MicvaDRAFT_5391 [Microcoleus vaginatus FGP-2]
gi|333459029|gb|EGK87644.1| hypothetical protein MicvaDRAFT_5391 [Microcoleus vaginatus FGP-2]
Length = 746
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 176/371 (47%), Gaps = 11/371 (2%)
Query: 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMK 240
+ +R +GY+S +HSV + +HD +++ Y K I+ + + K
Sbjct: 378 NEKRRYKVGYLSYCLRSHSVGWLARWLFEHHDRDRFEICAYLIGAKLTNDPIQ-QWYIGK 436
Query: 241 KGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT 300
++ GI + A + ED+IDIL++L T N +MA +PAPVQV+W+G+ +
Sbjct: 437 ADKAYK--LGISGIEAAEKIYEDEIDILIDLDSITMNTNCEVMAIKPAPVQVSWLGW-DA 493
Query: 301 TGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL---TNGF 357
+G+P +DY I D+ P + + E++ RLP +L P L ++
Sbjct: 494 SGVPNVDYYIADNYVLPESAQDYYAEKIWRLPATYLAVDGFEVGVPTVRRDLLDIPSDAV 553
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQLGLES 416
I + S K P ++ +I+ AVPNS V K F +S+++ F+ E GL +
Sbjct: 554 IYYCSQMGY-KYNPNTARLQMQIIKAVPNSYFVTKW--FAEQESLKNFFIQIAESEGLSA 610
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ LP H + D+ LDT+PY G TTT E+L+M +P VT G +
Sbjct: 611 DRLRFLPHAPSEAVHRANLGIADVVLDTYPYNGATTTMETLWMCIPLVTRVGQQFSSRNS 670
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
++ G+ IA ++EYV+ ++L D + LR +P+ +G+ F +
Sbjct: 671 YGMMMNAGILEGIAWTDEEYVEWGIRLGKDAALRQQISWQLRQSRQTAPLWNGKQFTREM 730
Query: 537 ESTYRNMWHRY 547
E Y MW Y
Sbjct: 731 EKAYEQMWQIY 741
>gi|119898993|ref|YP_934206.1| hypothetical protein azo2703 [Azoarcus sp. BH72]
gi|119671406|emb|CAL95319.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 774
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 21/379 (5%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
RPL +G +S D+ H+ ++ + L D +++ Y + D R ++ + K
Sbjct: 404 RPLRVGLLSADFRDHATAHLMTGVLEAIDPGRVRLIAYDYGPQHDDDYRRRLQRAIPK-- 461
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
W + G+ + + A + D +DI+++L G T + ++A +P P+Q+ W+G+P T G
Sbjct: 462 -WVMLAGLSDAEAAGRIAADAVDIVIDLKGWTQGFRAPILAYRPVPLQMQWLGFPGTMGA 520
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG---PVCP----TPALTNG 356
+DY I D + P + + E ++RLP C+ P G PV P L +
Sbjct: 521 AWLDYIIADGIVVPAGAEAGYSERVLRLPGCY-----QPNDGQRPPVTPLSRAEAGLPDD 575
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLE 415
+ +F+ KIT +W R+L +P++ L +++ P S R G++
Sbjct: 576 ALVLAAFHQHYKITRASFALWMRLLRGLPDALLWLLEGAP----SAMARLSQEARAHGVD 631
Query: 416 SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475
R+ P + + H H+ ++ DI+LD FP TT ++L+ GVP V G V
Sbjct: 632 PARLCWAPRVPVVH-HLNRLAVADIALDAFPVNAHTTASDALWAGVPQVARRGDTFVSRV 690
Query: 476 GVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALG 535
S+L GL LIA ++ Y L L L +D +R + D + + + + FA
Sbjct: 691 SASILDAAGLPELIAADDASYEALVLALGTDAGRRQAVRQRVADAVKHAGLFNSAAFARH 750
Query: 536 LESTYRNMWHRYCKGDVPS 554
LE W R+C G P+
Sbjct: 751 LEDALEWAWTRHCAGLPPA 769
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
++D+A AL + P+ + S +NL V+ QG+ A + +A+AA P +A+ ++NL
Sbjct: 198 DIDEAERWLVAALGLAPDDASSWSNLCVLRCRQGRFADAVDAGRQAVAAAPEWAQGHSNL 257
Query: 107 GVLYRDAGSISLAIDAYEQCLKID 130
+ R+AG+ A + L++D
Sbjct: 258 ALALREAGAREEARTHCLEALQLD 281
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
+A A++ P +Q+ +NLG V G++D A + +AI P A + NLG +
Sbjct: 63 EAAAVLGRAVAELPGDAQAHSNLGNALAVLGRIDEAIDAHRRAIRLQPEQATPHYNLGCV 122
Query: 110 YRDAGSISLAIDAYEQCLKIDPD 132
AG S A DA+ + PD
Sbjct: 123 LLQAGRRSEAADAWAEAQTRAPD 145
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
D A + A P A + +NL V+ + AV+ + A++ P ++Q +NL
Sbjct: 199 IDEAERWLVAALGLAPDDASSWSNLCVLRCRQGRFADAVDAGRQAVAAAPEWAQGHSNLA 258
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+ G + A +A+ + +AY NLG + D G LA +A + +K P
Sbjct: 259 LALREAGAREEARTHCLEALQLDGECVDAYYNLGCIAADLGEHELAREAGIEAVKRMP 316
>gi|259415576|ref|ZP_05739497.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
gi|259348806|gb|EEW60568.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
Length = 582
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 186/381 (48%), Gaps = 20/381 (5%)
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P + +GY S D+ H+ + +E HD ++ VY D + R + +
Sbjct: 205 PHDKIRVGYFSADFREHATMHLMEGVFKAHDRARFEFYVYD--FTPDPR-CRQHQIIRDF 261
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+++D+ + + A + R D++DI V+L G T +++ + A + APVQV+++G+P TT
Sbjct: 262 ADVYQDVSALSPIQTAELARRDQLDIAVDLKGRTTDSRPMIFARRVAPVQVSFLGFPGTT 321
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-------LT 354
+ +DY I D++ P +Q + E+++R+P CY P+ A V PT A L
Sbjct: 322 AMAEMDYMIADNITIPAGDEQYYSEQILRMPG---CYQPTNNAR-VVPTGAHPRSKFGLP 377
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
F +FN+ K+ P W IL VPNS L+ + + S E G+
Sbjct: 378 EDKFIFANFNHPHKVGPSEFATWMDILRQVPNSVLLFYAGK---NDLSAELASRAEAHGI 434
Query: 415 ESLRVDLLPL-ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
++ R+ LP L +H++ + +D+ LD F Y TT ++L+ GVP +T+ G A
Sbjct: 435 DAARI--LPCGSLSQQEHLERIAQVDLCLDCFAYNAHTTASDALWAGVPLLTLCGRQFAA 492
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
V S+++ G+ L +++ YV A+++A++ L L+ +++ S + D +
Sbjct: 493 RVATSIMSAAGVPELSTDSKEAYVAAAVRIATNTEELQVLKRKIKECRHASTLFDTNTWT 552
Query: 534 LGLESTYRNMWHRYCKGDVPS 554
E+ R+ G+ P+
Sbjct: 553 RNYEALLTKCHARFLAGEAPA 573
>gi|445499835|ref|ZP_21466690.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase [Janthinobacterium sp.
HH01]
gi|444789830|gb|ELX11378.1| putative UDP-N-acetylglucosamine-peptide
N-acetylglucosaminyltransferase [Janthinobacterium sp.
HH01]
Length = 957
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 150/595 (25%), Positives = 241/595 (40%), Gaps = 73/595 (12%)
Query: 13 KFDMAIVFYELAFHFNPHCAE-----ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQ 67
K + I Y+L HC A NL V+ D+ A Y+ +L + P F++
Sbjct: 47 KTEQTISLYQLWLE---HCDSPLEYVAWYNLAVVLLQADDEAGAERGYRQSLKLHPGFTE 103
Query: 68 SLNNLGVVYTVQGKMDAAAEM-------IEKAIAANPTYA-EAYNNLGVLYRDAGSISLA 119
S LG + + + +AA ++ A AA+P YNN+G L G + A
Sbjct: 104 SQLGLGGLLERRRQPEAALAQWRAALDDLDNAAAASPALQIRLYNNIGRLAEAQGDLPQA 163
Query: 120 IDAYEQCLKIDP-----------------------------DSRNAGQNRLLAMNYINEG 150
A L++DP +S LAM +++
Sbjct: 164 EQALLHSLQLDPRQGLIAPLWLNLRLKLCAWPVYGFVPGLSESALRHATSALAMLSLSDD 223
Query: 151 HDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY 210
+L A R+ R + + D R L IGY+S + + +
Sbjct: 224 PARQLAAAQRE--VRATQPPAPAPLADGDGYSHRKLRIGYLSNGFGAQPIGRMLAELFEL 281
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
H+ + +V + + + R+++++ + I + + + A +R +IDILV+
Sbjct: 282 HNREQIEVYGFCWTPEDGSA---LRQRLLRGMDLHVPIATLSDAQAAQAIRAHEIDILVD 338
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
L G + G++ +PAPVQ+ W+G P T+ + IDY + D++ PPE + E+ +
Sbjct: 339 LHGRLPGARPGILLQRPAPVQIAWLGQPGTSAMAAIDYVLADAVTLPPELAPHYTEQPLY 398
Query: 331 LPECFLCYTPSPEAGPVCPTP--ALTNGF----------ITFGSFNNLAKITPKVLQVWA 378
LP C+ P P+ P P A T+G + F+ +ITP+ W
Sbjct: 399 LPH---CHQPQDRLRPLPPAPMSASTSGARAAYGLPEPGFVYCCFSAPEQITPERYATWM 455
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
RIL VP+S L ++ + VR Q G+ S R+ + Y
Sbjct: 456 RILHQVPDSVLWLQA---AGEQVRDNLRVAAMQRGIPSERL-CFADPAAPEQQLARYQAA 511
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D+ LDT PYA + L+ G+P +T G A SLL GL L+ +E +Y
Sbjct: 512 DLFLDTAPYAAGAMAGDVLWAGLPLLTSTGDGSASRTSASLLHAAGLPELVTASEKKYEA 571
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
A++LA LA LR LR P+ D LE+ Y R KG +P
Sbjct: 572 RAVRLAERPKELARLRNRLRKHRDTVPLFDTPQLVNDLEALYL----RVAKGAIP 622
>gi|452965780|gb|EME70798.1| O-linked N-acetylglucosamine transferase [Magnetospirillum sp.
SO-1]
Length = 658
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 152/561 (27%), Positives = 229/561 (40%), Gaps = 49/561 (8%)
Query: 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA 92
E+ LG + + + +A + ++ + P F+ NL ++ AA + +++A
Sbjct: 104 ESLLALGNALRSLNRMGEAAQAFRRLTRVAPAFAGGHINLAILLVSSADNAAALDALDEA 163
Query: 93 IAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA---------------G 137
+ +P AE G G AI A + L I+P A G
Sbjct: 164 VRLHPGIAELQAMRGQALLRLGRHQDAIAALGKALAINPALAPAKGHLLRACRETADWDG 223
Query: 138 QNRLLA--MNYINEGH---------DDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPER-- 184
+ RL A I G D LF G+ R+ ++ P
Sbjct: 224 EERLFAEIRAAIARGEVKGQLPLSTQDALFYPFS--GEEMRRIAGLEAAFRVPGQPRPVV 281
Query: 185 --------PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFRE 236
PLV+GY+SPDY H+ + HD + + YS V D R R
Sbjct: 282 RPTPKAPPPLVVGYLSPDYREHATMHLAGDVFAAHDRGRVRPMAYS-VGPDDGSGWRRRV 340
Query: 237 KVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
+G + D+ + ++ A + D + ILV+L+ T + + G+ A +PAP+Q W+G
Sbjct: 341 AGGCEGFV--DLSALGDRAAAERIAADGVHILVDLSVFTRHARPGIAALRPAPLQAVWLG 398
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF---LCYTPSPEAGPVCPTPAL 353
++ P DY I D + PP E+LIRLP+ + L +TP P P L
Sbjct: 399 LAASSAAPWADYAIVDPVLVPPAHAGHFTEKLIRLPDTYQANLAWTP-PGPLPSRAALGL 457
Query: 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG 413
+ SFN K+ +W IL +P++ L P D+ R R G
Sbjct: 458 PEDRLVLCSFNGHRKLDRASFTLWLEILAELPDAVLWQLAPP---DTARKRLEEAARNAG 514
Query: 414 LESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH 473
++ R+ P L +H+ D+ +D TT +SL MGVP VT AG
Sbjct: 515 IDPARLIWAP-ALPRPEHLARLPAADLFVDALVCGAHTTAADSLRMGVPLVTAAGPRLGS 573
Query: 474 NVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFA 533
V SLL VGL L + +LA+ L D LA LR L +L+ SP D FA
Sbjct: 574 RVAASLLHAVGLPELAVTDAAALKELAVGLGRDRDRLAALRARLAELLPSSPAFDPSRFA 633
Query: 534 LGLESTYRNMWHRYCKGDVPS 554
GLE+ Y W R+ G P+
Sbjct: 634 RGLEAAYEAAWARHTAGKKPA 654
>gi|354566941|ref|ZP_08986112.1| TPR repeat-containing protein [Fischerella sp. JSC-11]
gi|353544600|gb|EHC14054.1| TPR repeat-containing protein [Fischerella sp. JSC-11]
Length = 740
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/570 (22%), Positives = 245/570 (42%), Gaps = 56/570 (9%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+ +AY + L +A EL +P+ E L Y++ DK +E ++ S+
Sbjct: 205 IEIAYSKRLP-TVAAQLCELYLKLSPNNTEVIGQLASFYQNSGQFDKGIETAKLYYSLVD 263
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAE-------------MIEKAIAANPTYAEAYNNLGVLY 110
+ + + ++G M A ++ + I NPT
Sbjct: 264 DIADKV--FANRQILRGLMSAGGHWQESCSVNQRQESLVAELIENNPTQL---------- 311
Query: 111 RDAGSISLAIDAY--EQCLKIDPDSRNAGQNRLLAM---NYINEGHDDKLFEAHRDWGKR 165
DA I +A+ L+ +P + QNRLL + N +N + H + G++
Sbjct: 312 -DAVRIVRLFNAFFFSPYLEDNPKKHRSLQNRLLQLCQANIVNYAKEQVEKYFHGNLGRK 370
Query: 166 FMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVV 225
T + +GY+S +HSV + YHD + +++ Y
Sbjct: 371 ------------KTTRINNKIKLGYLSHCLRSHSVGWLARWLFQYHDREKFQIHAYFINT 418
Query: 226 KADAKTIR--FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMM 283
+ + + V K + + ++A + +D+IDIL++L T + ++
Sbjct: 419 NPEFDPLHEWYLSNVDKAYKLSKTF------ELAEQIYQDEIDILIDLDSITLDITCEVV 472
Query: 284 ACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPE 343
+ +PAP+QVTW+G+ + +G P+IDY I D P ++ + E++ RLP+ ++
Sbjct: 473 SLKPAPIQVTWLGF-DASGSPSIDYFIADPYVLPESAQEYYTEKIWRLPQTYIGVDGFEV 531
Query: 344 AGPVCPTPALT--NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
+ P L + + + K + ++ RIL VPNS ++K +S
Sbjct: 532 SVPTITREQLDIPHDAVVYLCAQRGFKRHLDITRLQLRILKEVPNSYFLIKGIS-DEEST 590
Query: 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
+ F E+ G+++ + LP+++ H + D+ LDT+PY G TTT E+L+M +
Sbjct: 591 KAFFEKLAEEEGVDTSKFRFLPIVVAESVHRANLGIADVVLDTYPYNGATTTLETLWMCI 650
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P VT G A +++ G+ IA ++EYV+ ++L D + L+
Sbjct: 651 PMVTRVGEQFAARNSYTMMINAGITEGIAWTDEEYVEWGVRLGKDEALRQQIAWKLKKSR 710
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGD 551
SP+ +G+ F +E Y MW +Y + +
Sbjct: 711 KTSPLWNGKQFTREMEKAYEQMWKKYLEEE 740
>gi|298492469|ref|YP_003722646.1| hypothetical protein Aazo_4067 ['Nostoc azollae' 0708]
gi|298234387|gb|ADI65523.1| conserved hypothetical protein ['Nostoc azollae' 0708]
Length = 747
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 177/368 (48%), Gaps = 13/368 (3%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GY+S + HSVS+ YH+ + +K+ YS + R V K +
Sbjct: 384 LKVGYISHCFKRHSVSWLCRWIFKYHNQEKFKIHCYSYDDSEGIDSFTQRYFVDKSYKFY 443
Query: 246 RDIYGIDEK-KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
+ +G+ + ++ ++ED+IDILV+L T + +++ + AP+Q TW+G+ +++GLP
Sbjct: 444 K--FGLRQTYNLSNQIQEDEIDILVDLDSLTLDQVCELLSIKSAPIQATWLGW-DSSGLP 500
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT---NGFITFG 361
+IDY I D P + + E + RLP+ ++ P L + I F
Sbjct: 501 SIDYFIADPYVLPESAQDYYSETIWRLPQTYIAVDGFEIDVPDLRREDLNIPRDAIIYFM 560
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVK--CKPFCCDSVRHRFLSTLEQLGLESLRV 419
+ + P L++ +I+ VPNS L++K P ++ + F ++ G++ R+
Sbjct: 561 TQKGYKRHRPH-LRLQMKIIKEVPNSYLLIKGDADP---EASKVFFEEIAQEEGVDFNRI 616
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
LP H + D+ LDT+PY G TTT E+L+MGVP VT G + +
Sbjct: 617 KFLPYARSEAVHRANLQIADVVLDTYPYNGATTTLETLWMGVPLVTRVGEQFSARNSYGM 676
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+ + IA EDEYV+ ++L D + LR +P+ + + F +E+
Sbjct: 677 MINAAITEGIAWTEDEYVEWGVRLGKDEKLRQQISWQLRQSRHTAPLWNAKQFTRDMETA 736
Query: 540 YRNMWHRY 547
Y MW RY
Sbjct: 737 YEQMWQRY 744
>gi|428775921|ref|YP_007167708.1| hypothetical protein PCC7418_1295 [Halothece sp. PCC 7418]
gi|428690200|gb|AFZ43494.1| TPR repeat-containing protein [Halothece sp. PCC 7418]
Length = 736
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 185/374 (49%), Gaps = 17/374 (4%)
Query: 172 QYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKT 231
Q+T+ N+K + L IGY+S HSV + +H+++ +++ Y K+ +
Sbjct: 365 QFTTPINSK---KVLRIGYLSHCLKRHSVGWLTRWLFKHHNHEQFQIYAYLFNYKSQ-EY 420
Query: 232 IRFREKVMKKGGIWRDIYGI--DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
+E +++ Y + D K+A + D IDILV+L + + +MA +PAP
Sbjct: 421 DPLQEWFVQQAD---QAYKLEADSLKIAEQINRDNIDILVDLDSISHYITMQVMALKPAP 477
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCP 349
VQVTW+G+ + +GLP IDY I D P E ++ + E++ +LPE ++ A P
Sbjct: 478 VQVTWLGW-DASGLPAIDYFIADPYVLPQEAQEHYREKIWQLPEVYVAVDGFEVATPTLR 536
Query: 350 TPALT--NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD--SVRHRF 405
L + + S K P+ +++ +IL VPNS ++K D SV+ F
Sbjct: 537 REQLNIPQNAVVYFSAQAGKKRHPETVRLQMKILAQVPNSYFLIKG---LADEASVQAFF 593
Query: 406 LSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVT 465
++ G++S R+ LP + H ++ D+ LDT+PY G TTT E+L+M VP VT
Sbjct: 594 THIAQEEGVDSNRLRFLPYVAKEEIHRANLAIADVVLDTYPYNGATTTLETLWMAVPLVT 653
Query: 466 MAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSP 525
G + + + VG+ IA +++EY++ ++L +D + L SP
Sbjct: 654 RVGEQFSARNSYTFMKSVGVSEGIAWSDEEYIEWGVKLGTDQELRKKVTWQLWQSRQTSP 713
Query: 526 VCDGQNFALGLEST 539
+ + Q F +E +
Sbjct: 714 LWNAQQFTREMEKS 727
>gi|427712404|ref|YP_007061028.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 6312]
gi|427376533|gb|AFY60485.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 6312]
Length = 738
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 169/362 (46%), Gaps = 11/362 (3%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IGY++ HSV + YH+ Q +K+ +Y A T + + W
Sbjct: 381 LHIGYLAHTLRQHSVGWLCRWLFRYHNRQKFKIHLY---FLAQGVTPFTQAWFLPHADSW 437
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ E V + + D+ID+L++L G T + ++A +PAP+Q TW+G+ + TGLP
Sbjct: 438 W-AGNLPEDSVVQIFK-DEIDLLIDLDGGTYEDSAEVLAYKPAPIQATWLGW-DATGLPA 494
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL---TNGFITFGS 362
+DY I D PPE +Q + E++ RLPE +L P L + I F +
Sbjct: 495 VDYFIADPQVLPPEAEQYYAEKIWRLPEVYLAVDGFEIGVPTLRRADLDIPIDAVIYFTA 554
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
N L K P+ L+ +IL VPNS ++K + +R F S ++ G+ R+ +
Sbjct: 555 QNGL-KQHPETLKQQCQILAQVPNSYFLIKLRG-EKGILRELFESIAQEEGVSLSRLRFV 612
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
H L DI LD++PY G TTT E+L++ +P VT G A + +
Sbjct: 613 DFDSDELTHRANLQLADIVLDSYPYNGATTTLETLWLEIPLVTQVGQQFAARNSYTFMVN 672
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
G+ IA + EYV ++L D +R L SP+ D + F LE Y+
Sbjct: 673 AGITEGIAWSAPEYVAWGIKLGQDDKLRQQVRQKLHQAKQTSPLWDTRTFTRHLEEAYQR 732
Query: 543 MW 544
MW
Sbjct: 733 MW 734
>gi|116250489|ref|YP_766327.1| hypothetical protein RL0717 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255137|emb|CAK06211.1| putative conserved hypothetical TPR repeat protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 657
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 180/382 (47%), Gaps = 21/382 (5%)
Query: 186 LVIGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
+ IGY+S D++ H+ ++ L HD ++V ++ + ++ + G
Sbjct: 275 IRIGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGPEYLKHNTIDRSRWGR 331
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
++G ++ V +VRE IDI+V+L GHT+ ++ APV V W+G+P +T
Sbjct: 332 IVTVHGFSDQAVLEVVREHNIDIMVDLKGHTSGSRATAFNLPLAPVHVGWLGFPGSTVNV 391
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPVCPTP-ALTNGFITFG 361
+DY I D P K + E+ RLPE + P P+ PV L F
Sbjct: 392 DLDYVIGDHFVLPEVAKPFYHEKFCRLPESYQPNDPMHRPKPRPVTREQLGLPEDAFIFA 451
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGLESLRV 419
SFN KITP+ + W RIL PNS L + ++ R++ L + G+ R+
Sbjct: 452 SFNGNRKITPETIGSWCRILKRAPNSVLWL-----MANTPRNQANLLKQFQGAGISPKRI 506
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
P H+ D+ +DTFP G TTT E L+ G+P +T+ G+ A V SL
Sbjct: 507 IFCPRAPYEQ-HIDRQQAADLGIDTFPVNGHTTTSEQLWGGLPVLTVKGTNFASRVSESL 565
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L + L L+A + Y +A++LA + +A + L++ +P+ D + F LE+
Sbjct: 566 LRAIDLPDLVAPDLQAYEDMAVELAENPGRIAEYKAHLKEKRYIAPLFDAERFCDHLENA 625
Query: 540 YRNMWHRYCKG------DVPSL 555
Y M R +G D+P+L
Sbjct: 626 YEVMAERARQGLAPDHMDIPAL 647
>gi|406706967|ref|YP_006757320.1| hypothetical protein HIMB5_00014060 [alpha proteobacterium HIMB5]
gi|406652743|gb|AFS48143.1| tetratricopeptide repeat protein [alpha proteobacterium HIMB5]
Length = 657
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 143/621 (23%), Positives = 269/621 (43%), Gaps = 92/621 (14%)
Query: 10 EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL 69
E+ K++ +IV + + NP+ + N+LG ++ ++ LD+A++ Y A+ +K ++ ++
Sbjct: 47 ELKKYEQSIVQLKKSIEINPNYFQGYNSLGNVFLKKNELDEAIKNYDKAIELKNDYFEAY 106
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY-------------------------- 103
+N G Y K D A + NP Y AY
Sbjct: 107 HNRGNAYLKLKKKDKAINNYNLSTKYNPNYLAAYKSKVDLYYNFKNYEQALIEIENVLRL 166
Query: 104 --------NNLGVLYRDAGSISLAIDAYEQCLKIDPDS---------------------- 133
+ G ++ + + LA+ YE ++PD
Sbjct: 167 DPSNDKMYHKKGDIFTEKNQLDLALRNYENAYTLNPDKAFLLGSIQITKNKMCYWNDFFQ 226
Query: 134 -RNAGQNRLLAMNYINEGH-------DDKL-FEAHRDWGKRFMRLYSQYTSWDNTKDPER 184
+ +N++L I+ + KL E + W + + ++ K +
Sbjct: 227 LKKEVENKILENKKISPPYTVTTIYDSPKLQLECSKVWQSEYK--FENKINFRFNKKFSK 284
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
+ IG+ S D+ TH++ + + L HD +++ + K + + + +++K
Sbjct: 285 KIKIGFFSADFRTHAMGHLMVKMLEQHDKSMFELYGFYFGPKLNP-SDELQNRIIKCFSN 343
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTAN-NKLGMMACQPAPVQVTWIGYPNTTGL 303
+ +I + + +V + R+ IDI V+ +T + N+ G+ + AP+QV ++GYP T+G
Sbjct: 344 FIEISLMTDLEVTELCRKLDIDIAVDFMCYTGDYNRFGVFLQRAAPIQVNFLGYPGTSGS 403
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC------PTPALTNGF 357
+DY + D + K+ + E++I LP+ Y P+ + V + LT G
Sbjct: 404 KCMDYIVADKTLITEDEKKFYSEKIIYLPDT---YQPNEDLKKVSVNSISKQSLGLTEGS 460
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLES 416
F FN+ KI P + VW IL S L ++K F +++ L E
Sbjct: 461 FVFCCFNSHQKINPIIFDVWLEILKKTEKSVLWLLKDNKFSEKNIK---------LYCEK 511
Query: 417 LRVDLLPLILLNH----DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
+VD LI + DH+Q D+ LDTFPY TT ++L M +P +T+ G+ A
Sbjct: 512 NKVDPDRLIFADRVELEDHLQRIQYADLFLDTFPYNAHTTCSDALRMNIPVLTLKGNSFA 571
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
V SLL + L LI + + Y AL++ D + L +L +++ KS + + + +
Sbjct: 572 SRVASSLLNSLDLSELITHDLNNYKDAALKIYKDPSYLKSLNEKIKNNKVKSNLFNSKIY 631
Query: 533 ALGLESTYRNMWHRYCKGDVP 553
+E Y++++ Y G+ P
Sbjct: 632 TKNIEKAYQSIYKNYIDGNKP 652
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN 96
NL +YK++ L +C ++ +KPN LN ++ K + + ++K+I N
Sbjct: 7 NLIDLYKNKKFLRAEKKCSELIKKVKPN-HDLLNLYAIILFELKKYEQSIVQLKKSIEIN 65
Query: 97 PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
P Y + YN+LG ++ + AI Y++ +++ D A NR
Sbjct: 66 PNYFQGYNSLGNVFLKKNELDEAIKNYDKAIELKNDYFEAYHNR 109
>gi|402564953|ref|YP_006614298.1| tpr repeat-containing protein [Burkholderia cepacia GG4]
gi|402246150|gb|AFQ46604.1| tpr repeat-containing protein [Burkholderia cepacia GG4]
Length = 604
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 142/576 (24%), Positives = 262/576 (45%), Gaps = 58/576 (10%)
Query: 13 KFDMAIVFYELAFHFN--PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLN 70
+F++A + Y N P NLGV + ++++ A + A+ + P+F
Sbjct: 37 QFELAAILYRTWLERNAAPFNHFVYFNLGVALFNANDIEAAKKAQYTAIELAPDFIHPHF 96
Query: 71 NLGVVYTVQGKMDAA-AE---MIEKAIAANPTYA----EAYNNLGVLYRDAGSISLAIDA 122
NLGV+ ++D A AE ++E A A +P A NNLG ++ + + A+
Sbjct: 97 NLGVMCERANELDTAIAEWTWVVEHASADHPEQRPLRLSALNNLGRVHENQRRYADALVC 156
Query: 123 YEQCLKIDPDSRNAGQNRLL---------------------------AMNYINEGHD-DK 154
+ L+++P+ + + + A+ I++ D +
Sbjct: 157 LTESLRMEPNQPDVLHHWVFLRGKQCEWPVFAPVEGVDPDLMRRSTSALAMISQSDDPAE 216
Query: 155 LFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
A R + + + S E+ + I Y+S D+ H VS HD +
Sbjct: 217 QLSAARHYVDTKINVDVPALSGKKAYGHEK-IRIAYLSSDFCLHPVSMLTAELFELHDRR 275
Query: 215 NYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGH 274
++V Y + D +R +++++ + I + ++ A ++RE +IDI+V+L G
Sbjct: 276 RFEVYGY-CWSRDDGSALR--KRIIQSMDHFHRIDTMSDEAAAQLIREHEIDIVVDLHGQ 332
Query: 275 TANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPEC 334
T + ++A +PAP+Q+T++G P TTGLP ID+ I D P + E+ + +P+
Sbjct: 333 TLGARTDLLAYRPAPIQITYLGLPATTGLPYIDFVIADRFLIPEAYAHFYSEKPLYMPDI 392
Query: 335 F------LCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
+ P+P C P +GF+ F SFNN K TP+V W RIL VP S
Sbjct: 393 YQVSDRKRVSAPAPSRAS-CGLP--EDGFV-FCSFNNNYKFTPEVFGAWMRILQRVPASV 448
Query: 389 L-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY 447
L ++ P+ ++R + G++ R+ + + +++ +++ D+ LD+FP+
Sbjct: 449 LWLLADNPWAEANLR----KEAARYGIDGGRL-VFASRVSPENYLARFAVADLFLDSFPF 503
Query: 448 AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
TT ++L+MG+P +T++G A + ++LT G++ LI + Y + A+ LAS
Sbjct: 504 NAGTTANDALWMGLPVLTLSGKSFASRMAGAMLTAAGIEELITYDLQAYEEKAVALASAP 563
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
LR L + D F LE+ + +
Sbjct: 564 NECRRLREVLNAERRDGVLFDTPRFVNNLEAHFSRL 599
>gi|427713486|ref|YP_007062110.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 6312]
gi|427377615|gb|AFY61567.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 6312]
Length = 1128
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 181/376 (48%), Gaps = 16/376 (4%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA-VVKADAKTIRFREKVMKKG 242
+ L IGY+S + THSV + + H+++ +++ +Y V+ D R+ V +
Sbjct: 753 KTLKIGYISHCFRTHSVGWLASGLMTQHNHEKFEIYLYIIDVLNND------RDPVCEWY 806
Query: 243 GIWRDIYGI---DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
D Y I D +++A + ED+IDIL++L T + +M +PAP+QV W+G+ N
Sbjct: 807 KRICDHYFIGHTDFEELARQIAEDEIDILIDLDSITHDITTAVMCLKPAPIQVCWLGF-N 865
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGF 357
GL IDY + D E + + E+L RLP ++ L N
Sbjct: 866 APGLKEIDYFLIDHYVLGNEAQDYYFEKLWRLPNSYISVDGFEVHLATLKRHDLDIPNDV 925
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD-SVRHRFLSTLEQLGLES 416
I F S K P + + +I+ VPNS ++K F S++ F S ++GL +
Sbjct: 926 IIFLSSQGGQKRHPDTMSLQLQIIKNVPNSFFLIK--GFADQVSIQESFYSIASEIGLSA 983
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
++ L + H + D+ LDTFPY G TTT E+L+MG+P VT G A
Sbjct: 984 SQLRFLKPDSTSMIHRANLGIADVILDTFPYNGATTTLEALWMGIPLVTRVGQQFAARNS 1043
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
+ L G++ IA ++EYV+ ++ +D + LR +P+ D + F +
Sbjct: 1044 YTFLKNAGVEEGIAWTDEEYVEWGIKFGTDHELRRKVAEKLRRARYSAPLWDAKGFTKEV 1103
Query: 537 ESTYRNMWHRYCKGDV 552
E+ Y+ MWH Y G++
Sbjct: 1104 EAAYQAMWHNYVTGEM 1119
>gi|421587794|ref|ZP_16033148.1| hypothetical protein RCCGEPOP_04026 [Rhizobium sp. Pop5]
gi|403707632|gb|EJZ22587.1| hypothetical protein RCCGEPOP_04026 [Rhizobium sp. Pop5]
Length = 638
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 173/364 (47%), Gaps = 13/364 (3%)
Query: 188 IGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D++ H+ ++ L HD ++V ++ + ++ + G
Sbjct: 258 IGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGPEFLKHNNTDRSRWGKIV 314
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
++G ++ + V E IDI+V+L GHT+ ++ APVQV W+G+P +T +
Sbjct: 315 IVHGFSDQAMLETVHEHNIDIMVDLKGHTSGSRATAFNLPLAPVQVGWLGFPGSTVNIDL 374
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPVCPTP-ALTNGFITFGSF 363
DY I D P K + E+ RLPE + P P+ PV L F SF
Sbjct: 375 DYVIGDHSVLPDVAKPFYHEKFCRLPESYQPNDPMHRPKPRPVTREKLGLPEDAFIFASF 434
Query: 364 NNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
N KITP+ + W RIL PNS L ++ P ++ RF S+ G+ S R+
Sbjct: 435 NGNRKITPETIDSWCRILKRAPNSVLWLMANSPRNQANLLKRFQSS----GISSKRIIFC 490
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P +H+ DI +DTFP G TTT E L+ G+P +T+ G+ A V SLL
Sbjct: 491 PRAPYE-EHIDRQQAADIGIDTFPVNGHTTTSEQLWGGLPVLTVKGTNFASRVSESLLRA 549
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542
+ L L+A + Y +A++LA + +A + L++ +P+ D + F LE Y
Sbjct: 550 IDLPDLVADDLQAYEDMAVELAENPGRIAEYKAHLKEKRYIAPLFDAERFCHHLEQAYEI 609
Query: 543 MWHR 546
M R
Sbjct: 610 MAER 613
>gi|422302254|ref|ZP_16389617.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389788584|emb|CCI15664.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 711
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 184/379 (48%), Gaps = 26/379 (6%)
Query: 179 TKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREK 237
+K L IGY++ HSV + + +HD + ++ +Y+ + D T + FR+
Sbjct: 345 SKKASEKLTIGYLASTLKHHSVGWLSRWLIHHHDREKLQIAIYTINQEEDEITRQWFRDS 404
Query: 238 VMKKGGIWRDI-----YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQV 292
RDI Y + +VA +++D+IDILV+L T N +MA +PA QV
Sbjct: 405 --------RDIIRHFPYAQNPLEVAQQIQQDRIDILVDLDSLTHNLTNQIMALKPAAKQV 456
Query: 293 TWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY------TPSPEAGP 346
TW+G+ + +GL TIDY I D P + ++ + E++ RLPE +L TP+
Sbjct: 457 TWLGW-DASGLATIDYYIADPYVLPQQAEEYYREKIYRLPETYLAVDGFEIGTPNLRRED 515
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFL 406
+ P T I F + + + + P +++ +IL VPNS ++K + ++ F
Sbjct: 516 LEIPPDAT---IYFSAQSGMKR-HPDTIKLQMKILAQVPNSYFLIKGVG-KTEKIQELFT 570
Query: 407 STLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466
+ G+ R+ LP + + H + D+ LDT+PY G TTT E L+ G+P VT+
Sbjct: 571 EIAIREGVNPQRLRFLPRDIDEYTHRANLQIADVVLDTYPYNGATTTLEVLWQGIPLVTL 630
Query: 467 AGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV 526
G + + + G++ I NE EY+ ++L D + ++ L +P+
Sbjct: 631 VGEEFSARNSYTFMINAGIEAGIGWNEAEYIDWGVKLGLDRSLRQDISHQLLGNRDIAPL 690
Query: 527 CDGQNFALGLESTYRNMWH 545
G+ FA +E+ Y +W
Sbjct: 691 WQGKKFAENMENAYLEIWE 709
>gi|424898309|ref|ZP_18321883.1| hypothetical protein Rleg4DRAFT_4290 [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182536|gb|EJC82575.1| hypothetical protein Rleg4DRAFT_4290 [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 657
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 172/365 (47%), Gaps = 15/365 (4%)
Query: 188 IGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D++ H+ ++ L HD ++V ++ + ++ + G
Sbjct: 277 IGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGPEYLKHNVTDRSRWGRIV 333
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
DI+G ++ V A+VRE IDI+V+L GHT+ ++ APV V W+G+P +T +
Sbjct: 334 DIHGFSDQAVLAVVREHNIDIMVDLKGHTSGSRATAFNLPLAPVHVGWLGFPGSTVNIDL 393
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPVCPTP-ALTNGFITFGSF 363
DY I D P K + E+ RLPE + P P+ PV L F SF
Sbjct: 394 DYVIGDHSVLPEVAKPFYHEKFCRLPESYQPNDPMHRPKPRPVTREQLGLPEEAFIFASF 453
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGLESLRVDL 421
N KITP+ + W RIL P S L + ++ R++ L + G+ R+
Sbjct: 454 NGNRKITPETIDSWCRILKRAPTSVLWL-----MANTPRNQANLLKQFQTAGISPKRIIF 508
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
P H+ D+ +DTFP G TTT E L+ G+P +T+ G+ A V SLL
Sbjct: 509 CPRAPYEQ-HIDRQQAADLGIDTFPVNGHTTTSEQLWGGLPVLTVKGTNFASRVSESLLR 567
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+ L L+A + Y +A++LA + +A + L++ +P+ D + F LE Y
Sbjct: 568 AIDLPDLVASDLQAYEDMAVELAENPGRIAEYKAHLKEKRYIAPLFDAERFCDHLEQAYE 627
Query: 542 NMWHR 546
M R
Sbjct: 628 IMAER 632
>gi|75906571|ref|YP_320867.1| hypothetical protein Ava_0346 [Anabaena variabilis ATCC 29413]
gi|75700296|gb|ABA19972.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 739
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 135/560 (24%), Positives = 244/560 (43%), Gaps = 42/560 (7%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+ +AY + L +A EL +P+ E L Y++ + K +E ++ S+
Sbjct: 205 IEIAYSKRLP-GIAAQMCELYLKLSPNNTEIIGQLSSFYQNSNQFKKGIETARLYYSLVE 263
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL---GVLYRDAGSISLAI 120
F+ + ++G + A E++ + N +L Y D +S
Sbjct: 264 EFADKV--FANRQVLRGLISAGGHW-EESCSVNKIQESLIASLIENQPTYLDNVRVSRLF 320
Query: 121 DA--YEQCLKIDPDSRNAGQNRLLAM------NYINEGHDDKLFEAHRDWGKRFMRLYSQ 172
+A Y L+ +P QN LL + NY E +K H + K+
Sbjct: 321 NANFYSAYLQDNPRKNRNIQNCLLQVCQANIDNYAKE-QVEKYIYGHLERRKQ------- 372
Query: 173 YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTI 232
+ T + R IGY+S +HSV + +HD +++ Y D +
Sbjct: 373 ----ERTNNKIR---IGYLSYCLKSHSVGWLARWLFEHHDRSKFEINAYFINTNPDLDPL 425
Query: 233 R--FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPV 290
+ KV K + ++A + +D+IDIL++L T + ++ +PAPV
Sbjct: 426 HEWYLSKVDKAYK------STNTSELAEQIYQDEIDILIDLDSITLDISCEVIGMKPAPV 479
Query: 291 QVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPT 350
QVTW+G+ + +G P++DY I D P ++ + E++ RLP+ ++ + P
Sbjct: 480 QVTWLGW-DASGSPSVDYFIADPYVLPESAQEYYKEKIWRLPQSYIAVDGFEVSVPTVTR 538
Query: 351 PALT--NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
L + + + K P + ++ +I+ VPNS ++K DS++ F
Sbjct: 539 EELDIPHDAVVYLCGQRGFKRHPDITRLQLKIIKEVPNSYFLIKGIS-DEDSIKLFFDGL 597
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
++ G+++ R+ LP+++ H + DI LDT+PY G TTT E+L+M +P VT G
Sbjct: 598 ADEEGVDTSRLRFLPIVMSESIHRANLDIADIVLDTYPYNGATTTLETLWMCIPMVTRVG 657
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A +++ G+ IA +DEY++ ++L D + LR SP+ +
Sbjct: 658 EQFAARNSYTMMMNAGITEGIAWTDDEYIEWGVRLGKDEALRQQIAWKLRQSRKTSPLWN 717
Query: 529 GQNFALGLESTYRNMWHRYC 548
G+ F +E + MW Y
Sbjct: 718 GKQFTREMEKAFTQMWEIYT 737
>gi|148258992|ref|YP_001243577.1| hypothetical protein BBta_7846 [Bradyrhizobium sp. BTAi1]
gi|146411165|gb|ABQ39671.1| hypothetical protein BBta_7846 [Bradyrhizobium sp. BTAi1]
Length = 452
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 164/369 (44%), Gaps = 15/369 (4%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GY+S D+ H+ ++ + L D ++ +S R ++ ++
Sbjct: 76 LRVGYLSNDFHDHATAHLLIEALEATDRTRCELHAFSFGGNDHGA---MRSRLSGAFEVF 132
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
DI + A+ V IDILV+L G T + G+M PAPVQV ++GYP T G
Sbjct: 133 HDITASTDSDAASAVHAAAIDILVDLKGFTRGARTGIMMLHPAPVQVNFLGYPGTLGSGI 192
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG----PVCPTPALTNGFITFG 361
DY ITD P + E +P Y P A P L F
Sbjct: 193 CDYIITDPFLTPLAAAADYAESFAYMPHS---YQPHGRAALGRLPSRAEAGLPETGFVFC 249
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
FN K TP V +W R+L A P+S L + D + + G+ R+
Sbjct: 250 CFNQAYKFTPSVFDLWCRLLAATPDSVLWL----LASDQAQGNLRGEALRRGVSPDRLVF 305
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
P I +H++ L D+ LDT PY TT ++L+ GVP VT AG A V SLL
Sbjct: 306 APQIG-QSEHLRRLQLADLVLDTAPYGAHTTASDALWAGVPIVTCAGDTLASRVAGSLLH 364
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
VGL LIA +E +YV +AL LA++ L + L +P+ D +A L Y
Sbjct: 365 AVGLPELIASDEADYVAVALTLAAEPDLLLAAKARLARNRLTAPLFDAAAYARSLHDLYE 424
Query: 542 NMWHRYCKG 550
MW+R+ +G
Sbjct: 425 QMWNRWRRG 433
>gi|222148769|ref|YP_002549726.1| hypothetical protein Avi_2411 [Agrobacterium vitis S4]
gi|221735755|gb|ACM36718.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 582
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 182/402 (45%), Gaps = 25/402 (6%)
Query: 170 YSQYTSWDNTKDPERPLVIGYVSPDYFT-HSVSYFIEAPLVYHDYQNYKVVVYSAVVKAD 228
+SQ SW + IGY+S DY+ H+ + + + HD + V ++
Sbjct: 194 HSQPHSWGEK------IRIGYLSCDYWDDHATMRLLRSVMTAHDASRFDVTLFCYTSD-- 245
Query: 229 AKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPA 288
+ + + ++ G I + + + AA +R IDILV+L GHT ++ +M A
Sbjct: 246 -QFLAYDNGGRQQWGRIVSITDMSDDQAAARIRAHNIDILVDLKGHTRGSRSALMNRPLA 304
Query: 289 PVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFL----CYTPSPEA 344
PV V W+G+P T DY I D P +K + E+ RLPEC+ Y P +A
Sbjct: 305 PVHVQWLGFPGTCIEIDCDYAIGDRFVLPDSSKPHYHEKFCRLPECYQPNDPIYRPLADA 364
Query: 345 GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR 404
L + G+FN+ K + +++WA +L A P + L + R
Sbjct: 365 ASRMAL-GLPADRVVIGAFNSQRKNSLLTMRLWAEVLKANPKALLWLMID---GHGARQA 420
Query: 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464
+ + LG++ ++ P + + D ++DTFP G TTT + L+ G+P +
Sbjct: 421 TAAHFKTLGVKQSQLLFAPKMAYAAH-LARAQAADFAIDTFPCNGHTTTSDMLWAGLPVM 479
Query: 465 TMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS 524
TM G A V SLL +GL L+A NE ++V LA L +D L L+ L D K+
Sbjct: 480 TMQGRNFASRVSESLLNAIGLPQLVASNEQDFVALATALINDPEKLRALKQHLVDQRFKT 539
Query: 525 PVCDGQNFALGLESTYRNMWHRYCKG------DVPSLKRMEM 560
P+ D + F LE+ Y M R G DVP K M
Sbjct: 540 PLFDAKRFCRHLETAYEMMAERAKAGLSPDHFDVPHTKESHM 581
>gi|303246263|ref|ZP_07332543.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
gi|302492326|gb|EFL52198.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
Length = 676
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 139/572 (24%), Positives = 233/572 (40%), Gaps = 40/572 (6%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
++N VA ++ K D A E A +P A NLG IY+ + + AV + L+
Sbjct: 60 LFNYSVALQDVGKLDAAQESLEQAIALHPEFMPAYINLGRIYERQGKIGLAVIQWSAGLA 119
Query: 61 IKPNFS--------QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
+ +LN + ++A M+ +++ + E +L L +
Sbjct: 120 KMGAVTGTAVMHKTTALNQSARALEALNQDESAENMLRESLQLDRQQREVVQHLIALRQR 179
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRL--- 169
+ + + ++DP G + L A + DD + + R+ L
Sbjct: 180 QCEWPVLLPSE----RVDPTLLLEGMSPLSAGAFA----DDPILQLAV--AARYNLLDVG 229
Query: 170 --YSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKA 227
+ SW + L IGY+S D H++ Y + HD +V Y ++
Sbjct: 230 LPEGAHFSWPKAMEKTGKLRIGYLSSDMREHAMGYLMTEIFGLHDRSKVEVHAYYCGIET 289
Query: 228 DAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQP 287
+ K W I +D+ A + +D I +LV+ G+T + +L ++A +P
Sbjct: 290 NDG---LHGKYKSDADHWTSISQMDDAAAARKIVDDGIQVLVDCNGYTRDARLKLVALRP 346
Query: 288 APVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPV 347
APV + W+GYP T P Y I D P + + E+++RLP CY PS V
Sbjct: 347 APVIINWLGYPGTMASPYHHYIIADDWIIPENHELYYTEKVLRLP----CYQPSNRTRTV 402
Query: 348 CPT------PALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSV 401
P L + + FN L K+ W IL VP S L + ++V
Sbjct: 403 APERPTRAEAGLPEEGMVYCCFNGLHKVHRFTFDRWLSILAGVPGSVLWLLG---SSETV 459
Query: 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGV 461
R G+ R+ P + N +H+ Y L D+ LDT PY TT ++L+MGV
Sbjct: 460 EKRLRDYAAGRGIAGERIVFAPKVK-NPNHLARYPLADLFLDTTPYGAHTTASDALWMGV 518
Query: 462 PCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLM 521
P +T++G A V SL+ GL ++ + + +V+ A+ D +L +R L D+
Sbjct: 519 PVLTLSGRSFASRVCGSLVRAAGLPEMVCETPEAFVERAVAFGKDPQSLRAVREKLGDVH 578
Query: 522 SKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ D LE Y + + +P
Sbjct: 579 DSCVLFDMPLLVSKLEELYAQAFEAFTADRLP 610
>gi|375104670|ref|ZP_09750931.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderiales bacterium JOSHI_001]
gi|374665401|gb|EHR70186.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Burkholderiales bacterium JOSHI_001]
Length = 644
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 176/374 (47%), Gaps = 19/374 (5%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GYVS D+ H+ + L +HD + ++V +YS K D +R R + + +
Sbjct: 272 LRVGYVSADFHQHATCILMAEMLEHHDRERFEVTLYSHG-KDDGSLMRKRIEGAAEHFV- 329
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
++ G+ ++ A +R+D++D+L++L G+T +N+L + A +PA V +++G+P +TG
Sbjct: 330 -NLRGVSDRDAAQRIRDDRVDLLIDLKGYTKDNRLSLFAWKPARVSASFLGFPGSTGADF 388
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPS--PEAGPVCPTPALT-------NG 356
IDY + D + P E E++ ++P +CY P+ A P PT + G
Sbjct: 389 IDYIVGDPVVTPLEHAAHFDEKIAQMP---VCYQPNDRQRALPTPPTRSEAGLPDDGQGG 445
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
+ FN KI+ V W R+L +P + L + VR + G+
Sbjct: 446 PLVLCGFNQPFKISAPVFDTWCRLLHRLPQAVLWLL---EWNGQVRKNIELEAAKRGIAP 502
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ P H HM L DI +DT+P TT ++L+ VP VT AG A V
Sbjct: 503 ERLAWAPRRHPKH-HMARLQLADIFIDTWPCNAHTTASDALWAAVPVVTFAGRTFASRVA 561
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGL 536
SL VGL LI + Y + + LA D LR L S S + D F +
Sbjct: 562 ASLNHAVGLDGLICDDVAHYEERIVALAHDRPQRERLREHLAQARSGSALFDSLRFTRDI 621
Query: 537 ESTYRNMWHRYCKG 550
E+ Y M R+ +G
Sbjct: 622 EALYLRMLDRHDQG 635
>gi|381159625|ref|ZP_09868857.1| hypothetical protein Thi970DRAFT_03379, partial [Thiorhodovibrio
sp. 970]
gi|380877689|gb|EIC19781.1| hypothetical protein Thi970DRAFT_03379, partial [Thiorhodovibrio
sp. 970]
Length = 349
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 158/320 (49%), Gaps = 7/320 (2%)
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N ++L ++G + G + AA +A P A + N R+AG + A
Sbjct: 35 NDPEALLSIGTLLLSAGLLSAAETCFARASTLAPRDARPWVNRANRAREAGEHARARQIM 94
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFM-RLYSQYTSWDNTKDP 182
+ L+ P+ +N L ++ Y D + F R WG+ R +
Sbjct: 95 QALLEQFPNHPVIRRNALTSLEYDPAASDTERFAQARAWGQWAQTRAGGPHPRLLLVPRD 154
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
RPL IGY+S D H+V FI+ L HD +VY A D T + + V
Sbjct: 155 SRPLRIGYISADICQHTVGLFIKDVLAAHDPARITPIVYHAGQVRDWVTQQISQSVQL-- 212
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
R++ +D+ + A +R D ID+L++L+GHTA ++L + A +PAPVQV+W+GY TTG
Sbjct: 213 ---REVSALDDAALVAQIRADHIDVLIDLSGHTAGSRLSVFAHRPAPVQVSWLGYFATTG 269
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP-VCPTPALTNGFITFG 361
L +D + D+ PP T+ + +E ++ LP CY P P A + P P + ITFG
Sbjct: 270 LTEMDAVLLDAWHAPPGTESQFIEPILPLPAGRFCYQPVPWAPKDLSPPPVAHSARITFG 329
Query: 362 SFNNLAKITPKVLQVWARIL 381
SFNN AK+ V +WA+IL
Sbjct: 330 SFNNTAKLNDGVYDLWAQIL 349
>gi|323447882|gb|EGB03789.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
Length = 971
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 158/600 (26%), Positives = 253/600 (42%), Gaps = 59/600 (9%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E + D A+ Y A +P AEA NLG Y++ + A++CY AL I
Sbjct: 378 NLGSLLREQGQLDQALAHYHQAIALDPDFAEAYTNLGNTYRELCQFEDAIKCYTTALKIA 437
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +++ L V+ G + A E+A+A P + +A+ L +L +DA + DA
Sbjct: 438 PGLAEAHAALAAVHGDGGNYEDAIICFERALALKPHFPDAFAGL-LLAKDAVCDWTSRDA 496
Query: 123 YEQCLK--IDPDSRNAGQNRL-------------LAMNYINEGHDDKLFEAHR------- 160
+ Q L ++ +AG + L + I D +
Sbjct: 497 HFQYLAAVLEAHIEDAGTPLIFHGQLPCVQPLEALRLTTILAPRDAQRIARRFAARARAN 556
Query: 161 ---DWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYK 217
F + +S + +D R + +GY+S ++ H VS+ + LVYHD +
Sbjct: 557 LALSTSGVFHHHHHVLSSATSGRDKTR-IHVGYLSANFGNHPVSHLLAPVLVYHDRSRFL 615
Query: 218 VVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTAN 277
V YS + +D + R R + +G + +DI + A ++ D + IL+ L GHTAN
Sbjct: 616 VTCYS-LAPSDGTSWRTRLEHGIEGSV-KDIGILSSSDAARLIHADGVHILIPLDGHTAN 673
Query: 278 NKLGMMACQPAPVQVTWI-GYPNTTGLPTIDYRITDSLADPPE-------TKQKHVEELI 329
+ ++A +PAPVQV ++ G+P T G +DY + D + P T E ++
Sbjct: 674 AQNEIIALRPAPVQVGFVLGFPGTFGADYVDYLVVDEIVIGPTKPIDTLGTPHDIDEHVL 733
Query: 330 RLPECFLCYTPSPEAGPVC---------PTPALTNGFITFGSFNNLAKITPKVLQVWARI 380
LP + + E V T L F F + +I P + VW I
Sbjct: 734 ILPNSCILNGHAVEHRSVLDCSAGRLARETYGLPQDAFVFAYFGDSDRIDPIIFSVWMSI 793
Query: 381 LCAVPNSRLVVKCKP-FCCDSVRH--RFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
L VPNS L + D ++ R +EQ + S V +H+ L
Sbjct: 794 LKRVPNSLLWLHMNSETVIDRLKKEARGHQVIEQRLIFSNSVP-------RREHVFHAML 846
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
DI LDT T ++L+ G P + + G+ A SL + VG LI+ N +Y
Sbjct: 847 ADIVLDTPACNALDATLDALWAGTPVIALLGNTIATRTSASLCSAVGCHELISANLGDYE 906
Query: 498 QLALQLASDVTALANLRMSL---RDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPS 554
LA+ LA D R L R +++P+ D + LE+ Y +W R + P+
Sbjct: 907 DLAISLAIDSDKYWIFRQKLEHARRGPTQAPLFDFRLALHQLEAGYEAIWARVVEHQRPT 966
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 64/129 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + AI Y A P A +NLG +DR + +A+ C A +
Sbjct: 310 NLGNALRSLAHMREAIACYRTALRLKPDHPHAYSNLGTAMRDRGLIREAIHCNVTAARLM 369
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + NLG + QG++D A +AIA +P +AEAY NLG YR+ AI
Sbjct: 370 PHFAPAHANLGSLLREQGQLDQALAHYHQAIALDPDFAEAYTNLGNTYRELCQFEDAIKC 429
Query: 123 YEQCLKIDP 131
Y LKI P
Sbjct: 430 YTTALKIAP 438
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 67/129 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E+ + + FY A + P +A NNL + + A+E YQM L I
Sbjct: 106 NLANALKELGDYPGTLRFYLKAIKYKPRFGDAYNNLATAHMHLGQVSDAIETYQMGLVID 165
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + NLG + QGK++AA +AI NP +A A++NL L++D G +S AI
Sbjct: 166 PGLVDAHCNLGNLLKAQGKLEAARRCYLEAIRLNPAFAIAWSNLAGLFKDEGQLSTAIAY 225
Query: 123 YEQCLKIDP 131
Y + +++ P
Sbjct: 226 YREAIRLCP 234
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + + + AI +Y A P A+ +NLG +++ NL +A +CYQ A+ ++
Sbjct: 208 NLAGLFKDEGQLSTAIAYYREAIRLCPPFADVYSNLGSAMQEQGNLIEAKQCYQTAIRLR 267
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+ + NLG + A + AI P + +AYNNLG R + AI
Sbjct: 268 PDFAIAHGNLGSCLLTSHDAEGAVRALRHAIQLEPNFPDAYNNLGNALRSLAHMREAIAC 327
Query: 123 YEQCLKIDPDSRNAGQNRLLAM 144
Y L++ PD +A N AM
Sbjct: 328 YRTALRLKPDHPHAYSNLGTAM 349
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A+ + + AI Y++ +P +A NLG + K + L+ A CY A+ +
Sbjct: 140 NLATAHMHLGQVSDAIETYQMGLVIDPGLVDAHCNLGNLLKAQGKLEAARRCYLEAIRLN 199
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ +G++ A +AI P +A+ Y+NLG ++ G++ A
Sbjct: 200 PAFAIAWSNLAGLFKDEGQLSTAIAYYREAIRLCPPFADVYSNLGSAMQEQGNLIEAKQC 259
Query: 123 YEQCLKIDPD 132
Y+ +++ PD
Sbjct: 260 YQTAIRLRPD 269
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A P+ +A NNLG + ++ +A+ CY+ AL +KP+ + +NLG +G +
Sbjct: 297 AIQLEPNFPDAYNNLGNALRSLAHMREAIACYRTALRLKPDHPHAYSNLGTAMRDRGLIR 356
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A A P +A A+ NLG L R+ G + A+ Y Q + +DPD A N
Sbjct: 357 EAIHCNVTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALDPDFAEAYTN 412
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG K + A Y A NP A A +NL ++KD L A+ Y+ A+ +
Sbjct: 174 NLGNLLKAQGKLEAARRCYLEAIRLNPAFAIAWSNLAGLFKDEGQLSTAIAYYREAIRLC 233
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ +NLG QG + A + + AI P +A A+ NLG + A+ A
Sbjct: 234 PPFADVYSNLGSAMQEQGNLIEAKQCYQTAIRLRPDFAIAHGNLGSCLLTSHDAEGAVRA 293
Query: 123 YEQCLKID---PDSRNAGQNRLLAMNYINEG 150
++++ PD+ N N L ++ ++ E
Sbjct: 294 LRHAIQLEPNFPDAYNNLGNALRSLAHMREA 324
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 50/118 (42%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A E A Y+ A P A A NLG + + AV + A+ ++
Sbjct: 242 NLGSAMQEQGNLIEAKQCYQTAIRLRPDFAIAHGNLGSCLLTSHDAEGAVRALRHAIQLE 301
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
PNF + NNLG M A A+ P + AY+NLG RD G I AI
Sbjct: 302 PNFPDAYNNLGNALRSLAHMREAIACYRTALRLKPDHPHAYSNLGTAMRDRGLIREAI 359
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG A + AI A PH A A NLG + +++ LD+A+ Y A+++
Sbjct: 344 NLGTAMRDRGLIREAIHCNVTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALD 403
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F+++ NLG Y + + A + A+ P AEA+ L ++ D G+ AI
Sbjct: 404 PDFAEAYTNLGNTYRELCQFEDAIKCYTTALKIAPGLAEAHAALAAVHGDGGNYEDAIIC 463
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYI 147
+E+ L + P +A LLA + +
Sbjct: 464 FERALALKPHFPDAFAGLLLAKDAV 488
>gi|386395385|ref|ZP_10080163.1| hypothetical protein Bra1253DRAFT_00817, partial [Bradyrhizobium
sp. WSM1253]
gi|385736011|gb|EIG56207.1| hypothetical protein Bra1253DRAFT_00817, partial [Bradyrhizobium
sp. WSM1253]
Length = 406
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 170/349 (48%), Gaps = 10/349 (2%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P +L V ++G A ++ + +P L Y G I+ A++
Sbjct: 55 PRLEVALQGKAQVNILKGNTAGAIAAVKTLLEEHPRSDIGIALLASCYASQGDIATALEH 114
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDP 182
+ L I PD + ++ ++Y+ + A + W + Q DP
Sbjct: 115 LDAGLAIAPDYADLIGRKIFLLDYLPDADFAVQQAARKHWWEAIGAKLPQRVLSPRKLDP 174
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
++ ++IGYV+ ++ HS ++ + L +HD+ +++V YS D T FR
Sbjct: 175 DKRILIGYVASEFRNHSAAFALLPVLRHHDHARFEIVCYSCSPVRDEMTAAFRSS----A 230
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+W D + + + ++A ++ DKIDIL++++GHT N+L + A +PAP+QV+ G+ TG
Sbjct: 231 DVWVDAWQMSDDELADRIQADKIDILIDVSGHTTGNRLHVFARKPAPIQVSGFGHATGTG 290
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
L T+D+ + D + P + E++ LP C + P + P P L NG +TFG
Sbjct: 291 LQTMDHVLADPIFIPQSARHLLAEKVYDLP-CLITIDPILDV-PASEPPMLRNGHVTFGV 348
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKC----KPFCCDSVRHRFLS 407
FN + KI+ + ++VW+ ++ V S++V+K P DS+ RF++
Sbjct: 349 FNRIYKISDEAIRVWSNVMREVTGSKIVIKHTLLDDPMLRDSLIARFVA 397
>gi|427732274|ref|YP_007078511.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Nostoc sp. PCC 7524]
gi|427368193|gb|AFY50914.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Nostoc sp. PCC 7524]
Length = 739
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/557 (24%), Positives = 242/557 (43%), Gaps = 53/557 (9%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+F +A+ EL + +P+ E ++L +Y++ +K + ++ S+
Sbjct: 213 QFSIAVKLCELYLNLSPNNTEFISHLSSLYQNIGQYEKGIASAKLLFSL----------- 261
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
V V K+ A +++ ++ + E+Y V R I I+ L +
Sbjct: 262 --VEEVADKVFANRQILRGLMSTGGHWEESYY---VYQRQEKLIKFLIEDNHTQLDVSRI 316
Query: 133 SR--NAG----------------QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT 174
+R NA QN+LL + +N + L + H + YSQ
Sbjct: 317 ARLFNANFFTPYIEDNPINTRNIQNQLLQICQVN---INNLEQEH-------IEKYSQGN 366
Query: 175 SWDNT-KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR 233
T K + L IGY+S +HSV + +HD ++V Y + +
Sbjct: 367 LNRKTQKQINKKLNIGYLSHCLRSHSVGWLARWLFQHHDRDKFQVNGY--FINTNPTLDP 424
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
E + K + D ++A + +D+IDIL++L T + ++A +PAP+QVT
Sbjct: 425 LHEWYLTKVD--KTYKSNDYLQLADEIYQDEIDILIDLDSITLDTTCDIIALKPAPIQVT 482
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL 353
W+G+ + +G P++DY I D P ++ + E++ RLP ++ + P L
Sbjct: 483 WLGW-DASGSPSVDYFIADPYVLPESAQEYYTEKIWRLPHTYIGVDGFEVSVPTVRREEL 541
Query: 354 T--NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
N I + K P + ++ +I+ VPNS ++K +S R F ++
Sbjct: 542 DIPNDAIVYFCGQRGFKRHPDITRLQLQIIKEVPNSYFLIKGMS-DEESTRVFFEELADK 600
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
G+E ++ LP ++ H + DI LDT+PY G TTT E+L+M +P VT G
Sbjct: 601 EGVEISQLRFLPGVISESVHRANLGIADIVLDTYPYNGATTTLETLWMCIPMVTKVGEQF 660
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A +++ G+ IA ++EYV+ ++L D + LR SP+ +G+
Sbjct: 661 AARNSYTMMMNAGITEGIAWTDEEYVEWGVRLGKDEALRQQIAWKLRQSRKTSPLWNGKQ 720
Query: 532 FALGLESTYRNMWHRYC 548
F +E Y MW Y
Sbjct: 721 FTREMEKAYTQMWEIYT 737
>gi|402490310|ref|ZP_10837099.1| hypothetical protein RCCGE510_21284 [Rhizobium sp. CCGE 510]
gi|401810336|gb|EJT02709.1| hypothetical protein RCCGE510_21284 [Rhizobium sp. CCGE 510]
Length = 623
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 171/372 (45%), Gaps = 15/372 (4%)
Query: 188 IGYVSPDYF-THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D++ H+ ++ L HD ++V ++ + ++ + G
Sbjct: 243 IGYMSSDFWDRHATMKLLQRILELHDKDRFEVTLF---CHTGPEYLKHNNTDRSRWGRIV 299
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
I+G ++ V VRE IDI+++L GHT+ ++ APV V W+G+P +T +
Sbjct: 300 TIHGFSDQAVLETVREHNIDIMIDLKGHTSGSRASAFNLPLAPVHVGWLGFPGSTVNIDL 359
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP---ALTNGFITFGSF 363
DY I D P K + E+ RLPE + P P T L F SF
Sbjct: 360 DYVIGDHSVLPEVAKPFYHEKFCRLPESYQPNDPMHRPKPRAVTREQLGLPEDAFIFASF 419
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR--FLSTLEQLGLESLRVDL 421
N KITP+ + W RIL NS L + ++ R++ L + G+ R+
Sbjct: 420 NGNRKITPETIDSWCRILKRAQNSVLWL-----MANTPRNQANLLKQFQTAGISPKRIIF 474
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
P +H+ D+ +DTFP G TTT E L+ G+P +T+ G+ A V SLL
Sbjct: 475 CPRAPYE-EHIDRQQAADLGIDTFPVNGHTTTSEQLWGGLPVLTVKGTNFASRVSESLLR 533
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541
+ L L+A + Y +A++LA + +A + L++ +P+ D + F LE Y
Sbjct: 534 AIDLPDLVADDLQAYEDMAVELAQNPGRIAEYKAHLKEKRYIAPLFDAERFCDHLEQAYE 593
Query: 542 NMWHRYCKGDVP 553
M R +G P
Sbjct: 594 IMAERSKQGLAP 605
>gi|113478271|ref|YP_724332.1| hypothetical protein Tery_4945 [Trichodesmium erythraeum IMS101]
gi|110169319|gb|ABG53859.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 750
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 142/587 (24%), Positives = 257/587 (43%), Gaps = 71/587 (12%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK--DRDNLDKAVECYQMAL 59
+NL + + K D AI + A NP NL Y+ L++A+ +QMA+
Sbjct: 121 WNLAKVWEHLGKSDQAIASQQKALELNPSLGGVEFNLSEGYRLAKEGKLEEAIAVWQMAI 180
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
+KPN +++ +G++ +GK A + ++KAI P YA A+ +L + RD + +A
Sbjct: 181 KLKPNLAEAYGQIGMILRNKGKFSEALQNLKKAIEIQPNYATAHQHLCGILRDGNNYKVA 240
Query: 120 IDA----YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFE------------------ 157
+A Y++C ++DP ++ +NE D+ FE
Sbjct: 241 REAVNKYYQECQEMDPIMTGIYMISTYQVSGLNEIAKDRFFELETKIIENINFVKNSVEI 300
Query: 158 -----------------------AHRDWGKRFMRL--------YSQYTSWDNTKDPERPL 186
+R K + +L Y Q ++++ + + L
Sbjct: 301 KSLYCNFLFSIPYLRDDIKANSNVYRLVSKAYTKLVLKLKYDHYQQLSTFEFIQG--QKL 358
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAV-VKADAKTIRFREKVMKKGGIW 245
IG +S + HSV + + N ++ +YS +K D +T +F + +K
Sbjct: 359 KIGLISSHFCRHSVGWCSLDIIRELGNLNTEIYLYSTEHLKIDDQTHKFSQAAIKLYVPK 418
Query: 246 RDIYGI-DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
+ GI D K++ +++DK+DIL++L + + QPAP+ ++W+G+ + +
Sbjct: 419 KYPEGIADAKEIIEEIQQDKVDILIDLDSLSLPINTEIFYHQPAPICISWLGF-DAPYIS 477
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYT--PSPEAGPVCPTPALTNGF--ITF 360
+ +Y + D P + + +VE+L+R+ + F+ + E + G I +
Sbjct: 478 SDNYFLCDWNTHPQDRDKYYVEKLVRMKDSFVAVSGFERIETSKTTLRKSQRIGLDQIVY 537
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
+ K ++ IL VPNS LV K + + + + G+ RV
Sbjct: 538 LCLASGRKFNRDLVNGQVAILKQVPNSILVHKALG-DIEVFQSAYHEACKAEGVSIHRVK 596
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+P+ +H YSL DI LD++PY G T T E+L+ +P VT AG +G S L
Sbjct: 597 FMPIFSTEEEHRSIYSLADILLDSYPYNGGTHTLEALWFNLPVVTYAGEQFLSRMGYSFL 656
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRD--LMSKSP 525
+ +K ++ + +EY+ ++L D NLR D + SKSP
Sbjct: 657 ESLDIKLGVSWSWEEYINWGVKLGQDY----NLRQEYIDSLVKSKSP 699
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
K AI Y A FNP ++A NLG ++ + L++A+ Y A+ ++P + + NL
Sbjct: 64 KVSEAISVYYRAIEFNPDLSQAYINLGTMFYRQGKLEEAIANYYKAIQLQPEMAAAYWNL 123
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA--GSISLAIDAYEQCLKID 130
V+ GK D A +KA+ NP+ NL YR A G + AI ++ +K+
Sbjct: 124 AKVWEHLGKSDQAIASQQKALELNPSLGGVEFNLSEGYRLAKEGKLEEAIAVWQMAIKLK 183
Query: 131 PDSRNA-GQNRLLAMN 145
P+ A GQ ++ N
Sbjct: 184 PNLAEAYGQIGMILRN 199
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%)
Query: 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86
P+ A A L I + + + +A+ Y A+ P+ SQ+ NLG ++ QGK++ A
Sbjct: 44 LQPNWAPAYVTLANILQAQGKVSEAISVYYRAIEFNPDLSQAYINLGTMFYRQGKLEEAI 103
Query: 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
KAI P A AY NL ++ G AI + ++ L+++P
Sbjct: 104 ANYYKAIQLQPEMAAAYWNLAKVWEHLGKSDQAIASQQKALELNP 148
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
+Y + +A+ C + L+++PN++ + L + QGK+ A + +AI NP +
Sbjct: 24 LYYTQGQFSEAMGCCRQVLTLQPNWAPAYVTLANILQAQGKVSEAISVYYRAIEFNPDLS 83
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK 154
+AY NLG ++ G + AI Y + +++ P+ A N LA + + G D+
Sbjct: 84 QAYINLGTMFYRQGKLEEAIANYYKAIQLQPEMAAAYWN--LAKVWEHLGKSDQ 135
>gi|16330340|ref|NP_441068.1| hypothetical protein slr1816 [Synechocystis sp. PCC 6803]
gi|383322081|ref|YP_005382934.1| hypothetical protein SYNGTI_1172 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325250|ref|YP_005386103.1| hypothetical protein SYNPCCP_1171 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491134|ref|YP_005408810.1| hypothetical protein SYNPCCN_1171 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436401|ref|YP_005651125.1| hypothetical protein SYNGTS_1172 [Synechocystis sp. PCC 6803]
gi|451814498|ref|YP_007450950.1| hypothetical protein MYO_111820 [Synechocystis sp. PCC 6803]
gi|1652829|dbj|BAA17748.1| slr1816 [Synechocystis sp. PCC 6803]
gi|339273433|dbj|BAK49920.1| hypothetical protein SYNGTS_1172 [Synechocystis sp. PCC 6803]
gi|359271400|dbj|BAL28919.1| hypothetical protein SYNGTI_1172 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274570|dbj|BAL32088.1| hypothetical protein SYNPCCN_1171 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277740|dbj|BAL35257.1| hypothetical protein SYNPCCP_1171 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958259|dbj|BAM51499.1| hypothetical protein BEST7613_2568 [Synechocystis sp. PCC 6803]
gi|451780467|gb|AGF51436.1| hypothetical protein MYO_111820 [Synechocystis sp. PCC 6803]
Length = 717
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 176/365 (48%), Gaps = 18/365 (4%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY++ HSV + YHD + +++ VY I E + + I+ +
Sbjct: 360 IGYIAHTLRQHSVGWLCRWLFKYHDREKFEIFVY---------LIGQPEDELTENWIYPN 410
Query: 248 I-----YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+ +G D+ ++ +++D+I ILV+L T N ++A +PAPVQV+W+G + +G
Sbjct: 411 VSKYYHFGRDKNEIIKQIKQDQIQILVDLDVLTHNITAQVLAHKPAPVQVSWLG-SDASG 469
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL--TNGFITF 360
LP IDY I D P + + + E+L RLP+ +L P L + +
Sbjct: 470 LPAIDYFIVDPYVVPDDAEGYYREKLWRLPQTYLAVDGFEMGTPTLSREQLGIKPNTVIY 529
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD 420
S N K P +L++ +IL +VP+S ++K + +R +++GL+ R+
Sbjct: 530 LSVQNKIKSNPNILKLQLQILQSVPDSVFLIKGGG-DNELIRAMVEQLAKEMGLDLHRIR 588
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LP H S+ D+ LDT+PY G TTT E+L+M VP VT G A + L
Sbjct: 589 FLPKDGDEMTHRANLSIADVVLDTYPYNGATTTLETLWMEVPLVTRVGKQFASRNSYTFL 648
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
T++ ++ +A N+ EYV + + + ++ L KS + ++F LE Y
Sbjct: 649 TQLNIREGLAWNDQEYVYWGTRFGLEKSLREKVKNELNLGKYKSKLWRAKDFTQELELAY 708
Query: 541 RNMWH 545
MW+
Sbjct: 709 EGMWN 713
>gi|428217091|ref|YP_007101556.1| hypothetical protein Pse7367_0828 [Pseudanabaena sp. PCC 7367]
gi|427988873|gb|AFY69128.1| hypothetical protein Pse7367_0828 [Pseudanabaena sp. PCC 7367]
Length = 809
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 176/379 (46%), Gaps = 27/379 (7%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK------ 237
RPL IGY+S HSV + YH+ +++ Y I FR+
Sbjct: 443 RPLKIGYLSSCMRRHSVGWLARWLFQYHNRDRFEIYTY---------FINFRQTDDKLQT 493
Query: 238 --VMKKGGIWRDIYGIDEKK----VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQ 291
K +R GID K +A + D++DIL++L T+ +++ +PAP+Q
Sbjct: 494 WYAQKSDQAYRG--GIDGKDDGVTLAKKIFADQVDILIDLDSITSYVAPEVLSLKPAPIQ 551
Query: 292 VTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP 351
V+W+G + TG+PT+DY I D P ++ + E++ RLP +L + P
Sbjct: 552 VSWLGL-DATGVPTVDYFIADHYVLPEYAQEYYSEKIWRLPHTYLAVEGFETSAPTLNRD 610
Query: 352 ALT--NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
L + F + K P ++ +I+ VPNS L++K +S+++ F +
Sbjct: 611 RLDIPADAVVFLTAQTGQKRHPDTTRMQLQIISQVPNSYLLIKGIA-DQESMQNLFKNLA 669
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
+ G+ ++ LPL+ H ++ D+ LDT+PY G TTT E+L+MG+P VT G
Sbjct: 670 IEAGVSENQLKFLPLVKNEETHRANLAIADVVLDTYPYNGATTTMETLWMGIPIVTRVGE 729
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
+ ++ G+ IA ++ EY++ ++L D + LR +P+ +
Sbjct: 730 QFSARNSYGMMINAGINEGIAWSDQEYIEWGVRLGKDEKLRQQIAYKLRMGRHSAPLWNA 789
Query: 530 QNFALGLESTYRNMWHRYC 548
+ F +E Y MW Y
Sbjct: 790 KQFVKEMEDAYTQMWQAYV 808
>gi|126728515|ref|ZP_01744331.1| TPR domain/SEC-C motif domain protein [Sagittula stellata E-37]
gi|126711480|gb|EBA10530.1| TPR domain/SEC-C motif domain protein [Sagittula stellata E-37]
Length = 555
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 180/370 (48%), Gaps = 24/370 (6%)
Query: 185 PLVIGYVS-----PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK-- 237
PL +GYVS P+Y + + + HD +V ++S + A+ I + +
Sbjct: 191 PLRVGYVSSWLEKPNYMRPTWAL-----INNHDRSKVEVHLFSDSAEG-AEMIGYDPQPT 244
Query: 238 -VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIG 296
V+ G +D ++ ++ + ++DIL+++ ++ +LG AP+ + W
Sbjct: 245 DVIHATG------KLDNTQLGKLICKTELDILIDINAYSTPERLGTFTQPVAPICLAWQN 298
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG 356
+ +GLP + D + P + E + RLP +L +T + +A PV P LTNG
Sbjct: 299 HFAPSGLPGFHGIVGDEQSVKPGEEGVFNETVYRLPTSYLTFTVAHKAPPVVDPPCLTNG 358
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLES 416
ITFGS K+TP V+ W+ IL VP + L + + R + G+++
Sbjct: 359 HITFGSLCVQYKLTPTVIDAWSEILKGVPGATLFLANRALESGENRVWLTERFAERGIDT 418
Query: 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R+ + ++D+++ Y MDI+LD FPY G TTT E+++ GVP +T G A
Sbjct: 419 DRL-IFDGGAEHYDYLKNYDRMDIALDAFPYNGGTTTVEAIWQGVPVLTFDGDRWASRTS 477
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANL---RMSLRDLMSKSPVCDGQNFA 533
SL+ LK +A + + +A+++ +D A L R +RD + +PVCDG+ A
Sbjct: 478 ASLICYTHLKDFVAPSRQAMIDMAIRMGNDPETPARLKEMRHGMRDALKDAPVCDGKRMA 537
Query: 534 LGLESTYRNM 543
+E+ + +
Sbjct: 538 QSMEALFDRL 547
>gi|145588310|ref|YP_001154907.1| hypothetical protein Pnuc_0122 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046716|gb|ABP33343.1| Tetratricopeptide TPR_2 repeat protein [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 660
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 137/546 (25%), Positives = 232/546 (42%), Gaps = 58/546 (10%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y LG + E+ + AI+ A +P+ E+ +++G Y N A+E A
Sbjct: 78 LYALGSLHLELGNYPEAILHLNHALDLDPNSFESLHDIGAAYALSGNKVAALESLLKAAK 137
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV---LYRDAGSIS 117
I + NLG +Y Q + AA K++ N ++ EA+ NLG+ +Y+
Sbjct: 138 INSQSADLFYNLGRLYDDQFEYGAAITAYRKSVEINSSFTEAWINLGIDLGVYKKYSESL 197
Query: 118 LAID-AYEQCLKIDPDSRNAG--QNRLLAMNYINEGHDDKLFEAHRDWGKRFM------- 167
+D AY Q +D + R+ +N D+ E G R +
Sbjct: 198 RCLDIAYAQNPNVDFLYGDCLYLHMRMCLWEKLNLAKDN--IEKGVMKGTRIIPPFPLSA 255
Query: 168 ------------RLYSQYTSWDNTK------DPERPLVIGYVSPDYFTHSVSYFIEAPLV 209
++Y+Q N+ + + +GY SPD+ H VSY +
Sbjct: 256 LIDSPTLNLEAAKIYTQARYPKNSSLGPISNSSNKKIKVGYFSPDFHEHPVSYLMAEVFE 315
Query: 210 YHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILV 269
HD +++ +S R++V + D+ +++A+M RE IDI +
Sbjct: 316 LHDRSQFEIYGFSF---GKPNNDAMRQRVESSFDHFLDVAQNTPQEIASMSREMGIDIAI 372
Query: 270 ELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELI 329
+L G T N + + A + AP+Q ++IG+ + G IDY I D + PP+ +Q + E++I
Sbjct: 373 DLCGFTENARTEIFAMRAAPIQASYIGFLGSMGAEYIDYLIADEVIVPPQLRQFYSEKII 432
Query: 330 RLPECFLCYTPSPEAGPVCPTPA----------LTNGFITFGSFNNLAKITPKVLQVWAR 379
Y PS +A P+ + F + NN KIT + W R
Sbjct: 433 --------YLPSYQANDSKRAPSEKYFAKSDFGIQEDQFVFCNLNNAFKITQAIFDSWLR 484
Query: 380 ILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMD 439
IL PNS +++ + L + G+ R + L D++ Y + D
Sbjct: 485 ILKMTPNSVMLLYAE---NAEATKNLLEYASKNGVAPQRF-VFAERLTRADYLARYKITD 540
Query: 440 ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQL 499
+ LDT PY TT ++L+M +P +T+ G V SLLT + L LI ++ Y
Sbjct: 541 LFLDTTPYNAGTTASDALWMDIPVITLQGESFPSRVASSLLTHLDLPELIHQSMAGYETQ 600
Query: 500 ALQLAS 505
A++LA+
Sbjct: 601 AVELAT 606
>gi|428221016|ref|YP_007105186.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 7502]
gi|427994356|gb|AFY73051.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 7502]
Length = 734
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 171/375 (45%), Gaps = 25/375 (6%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR---------- 233
R L IG++S HSV + + Y D + +++ Y ++
Sbjct: 368 RKLKIGFLSTTLRLHSVGWLARYLIQYLDREQFEIYGYFPEYYEGRDFLQEWYVGMMHKV 427
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
FR V G +R VA + D+IDIL++L T+ ++A +PAP+QVT
Sbjct: 428 FRNHVEYWGNHFR---------VAEEINRDEIDILIDLESTTSGLCTMLVALKPAPIQVT 478
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPAL 353
W+G+ + +G+P IDY I DS P ++ + E++ RLP C+L + P L
Sbjct: 479 WLGW-DASGIPAIDYYIADSFVLPDNAQEYYTEKIWRLPHCYLAVDGFEASSPTLTREQL 537
Query: 354 ---TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLE 410
NG I F S K P+ +++ +IL VPNS ++K +S++ F E
Sbjct: 538 EVPANGIIYFSS-QKSDKRHPETVRLQMQILKQVPNSYFLIKGLS-DQNSIKDFFYEMAE 595
Query: 411 QLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSV 470
G+ ++ LP ++H + D+ LDT+PY G TTT E L+ G+P VT G
Sbjct: 596 LEGVNRDQLRFLPYSREENEHRGNLPIADVVLDTYPYNGATTTMEVLWSGIPLVTRVGEQ 655
Query: 471 HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQ 530
A +++ G+ IA +EYV ++ + ++ L+ SP+ + +
Sbjct: 656 FAARNSYTMMMNAGISEGIAWTPEEYVAWGVRFGLEEDLRRDVAWKLKQSRKTSPLWNAR 715
Query: 531 NFALGLESTYRNMWH 545
F E+ + MW
Sbjct: 716 QFTREFETALKEMWE 730
>gi|99078404|ref|YP_611662.1| tetratricopeptide TPR_2 [Ruegeria sp. TM1040]
gi|99035542|gb|ABF62400.1| Tetratricopeptide TPR_2 [Ruegeria sp. TM1040]
Length = 560
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 181/376 (48%), Gaps = 12/376 (3%)
Query: 182 PERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKK 241
P + +GY S D+ H+ + IE + HD ++ VY K D T R + +
Sbjct: 185 PHEKIRVGYFSADFSEHATMHLIEGLIEAHDKGVFEFHVYD--FKPD-PTSRQHQIIRDF 241
Query: 242 GGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTT 301
+ D+ + + AA+ R++++DI V+L G T +++ + A + APVQV+++G+P TT
Sbjct: 242 ADCYHDVSALSAAETAALARQEQLDIAVDLKGITTDSRPMIFALRVAPVQVSFLGFPGTT 301
Query: 302 GLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPS---PEAGPVCPTPALTNGFI 358
+ +DY I D + P ++ + E+++RLP C+ T S PE L +
Sbjct: 302 AIAEMDYMIADRITIPDGDERFYSEKILRLPGCYQPNTNSRILPEGAGGRAAFGLPDDRF 361
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVV-KCKPFCCDSVRHRFLSTLEQLGLESL 417
F SFN+ K+ P W IL VP + L+ K ++ R + G+E
Sbjct: 362 VFASFNHPHKVGPSEFATWMEILREVPQAVLLFYSGKADLGAALAER----AQAHGVEPS 417
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
RV L L H++ + +D+ LD F Y TT ++++ GVP +T+AG A V
Sbjct: 418 RV-LACGPLPQTAHLERIAQVDLCLDCFAYNAHTTASDAVWAGVPLLTLAGRQFAARVAT 476
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S+L+ G+ L + +YV A+ LA+ L LR + SP+ D + + E
Sbjct: 477 SILSTAGVPELSTVSTKDYVAKAVHLATHPEDLLALRQKISAARHGSPLFDTKRWTRDYE 536
Query: 538 STYRNMWHRYCKGDVP 553
+ + + R+ G+ P
Sbjct: 537 ALLQMCYQRHRAGEAP 552
>gi|428769582|ref|YP_007161372.1| hypothetical protein Cyan10605_1209 [Cyanobacterium aponinum PCC
10605]
gi|428683861|gb|AFZ53328.1| hypothetical protein Cyan10605_1209 [Cyanobacterium aponinum PCC
10605]
Length = 617
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 191/424 (45%), Gaps = 23/424 (5%)
Query: 135 NAGQNRLLAMNYINEGHDDKLF--EAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVS 192
N QNR L + KLF E + + L Q + + L IGY+S
Sbjct: 203 NLSQNRFL------QNQIAKLFTKETRAKYSSLILSLSKQTQVKKDNIKSTKKLKIGYIS 256
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
+ + V Y L Y+D ++V +Y D T ++ K +R +
Sbjct: 257 SAFRHNPVGYLSRWLLKYYDRDKFEVFIYLMSDYEDEIT---QQWFFKNATKYRKFPVAN 313
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD 312
++ + +D++DILV+L T + +M + AP+Q + +G ++TG+PTIDY I D
Sbjct: 314 ITEIVNQISQDELDILVDLDCLTNHRTSQVMTFKLAPIQASCLGL-DSTGIPTIDYFIAD 372
Query: 313 SLADPPETKQKHVEELIRLPECFLCYTPSPEAGP--VCPTPALTN-GFITFGSFNNLAKI 369
S P + + E++ RLP C+L P + + N I + + K
Sbjct: 373 SFVLPDNAQTYYQEKIWRLPNCYLAVDGFESGTPRLLSKVDGIVNEDAIIYWTIQTGWKK 432
Query: 370 TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI-LLN 428
+ K L++ +IL V NS L ++C + +EQ G++ R+ LLP + LLN
Sbjct: 433 SEKSLRLQLKILKQVDNSYLFIQC-----NGNDKSIKKIVEQEGVDVNRIKLLPFVPLLN 487
Query: 429 HDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL 488
+ + L +I LD +P+ G T+T ++L++ +P VT G G + L +G+
Sbjct: 488 Y--RANFFLTNILLDNYPFNGATSTLDALWLNIPLVTRVGEQFHARQGYTFLKNLGITEG 545
Query: 489 IAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548
IA ++EY+Q ++ +D + LR SP+ D + F +E Y+ MW Y
Sbjct: 546 IAYTDEEYIQWGVKFGTDEELRKKVYWKLRQSKKTSPLWDAKQFTRDMEKAYQQMWEIYV 605
Query: 549 KGDV 552
+
Sbjct: 606 SKQI 609
>gi|326523469|dbj|BAJ92905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 165/352 (46%), Gaps = 16/352 (4%)
Query: 211 HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVE 270
HD N +V Y A+ + D +R+++ + + D+ + +A M+ EDKI +L+
Sbjct: 8 HDRDNVEVFCY-ALSQNDG--TEWRQRIQAEAEHFIDVSAMTSDVIAKMINEDKIQVLIN 64
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
L G+T + + A QPAP+QV+++G+P TTG IDY +TD P + E+L+
Sbjct: 65 LNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGASYIDYLVTDEFVSPTRYAHIYSEKLVH 124
Query: 331 LPECFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNLAKITPKVLQVWARILC 382
LP C+ + PVCP G F FN L K+ P++ W I+
Sbjct: 125 LPHCYFVNDYKQKNCDVLSPVCPHKRSDYGLPKDKFIFACFNQLYKMDPEIFDTWCNIVK 184
Query: 383 AVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISL 442
VPNS L + P + R + G+ ++ + + + H+H++ L D+ L
Sbjct: 185 RVPNSVLWLLRFP---ATGEMRVKAHAAARGVSPDQI-IFTDVAMKHEHIRRSELADLFL 240
Query: 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-KHLIAKNEDEYVQLAL 501
DT TT + L+ G+P +T+ A V SL GL +I + EY A+
Sbjct: 241 DTPLCNAHTTGTDILWAGLPMITLPLEKMATRVAGSLCLATGLGDEMIVSSTKEYEDRAV 300
Query: 502 QLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+LA++ L L L+++ P+ D + L+ Y MW+ YC G P
Sbjct: 301 ELATNPAKLQALTNKLKEVRLTCPLFDTARWVRNLDRAYFKMWNIYCSGRHP 352
>gi|16125359|ref|NP_419923.1| hypothetical protein CC_1107 [Caulobacter crescentus CB15]
gi|221234101|ref|YP_002516537.1| O-linked GLCNAC transferase [Caulobacter crescentus NA1000]
gi|13422417|gb|AAK23091.1| TPR domain protein [Caulobacter crescentus CB15]
gi|220963273|gb|ACL94629.1| O-linked GLCNAC transferase [Caulobacter crescentus NA1000]
Length = 672
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 166/375 (44%), Gaps = 23/375 (6%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY-SAVVKADAKTIRFREKVMKKGGIWR 246
IGY+S D H+V Y + HD +V Y +D R R +
Sbjct: 253 IGYISSDLRDHAVGYLMAELFEVHDKAKVEVFAYYCGPESSDGLNTRIRAAAEH----FI 308
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
DI + + + A + +D IDILV++ GHT + + + A +PAP+ V W+GYP T G
Sbjct: 309 DIRPMSDDEAAQRIVDDGIDILVDVNGHTRDARTAVFARRPAPILVNWLGYPGTMGSDYH 368
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCP-TPALT------NGFIT 359
Y + D PPE + + E + R+P CY P+ V P T +GF+
Sbjct: 369 HYIVGDPWIIPPEMELYYSEAVRRIP----CYQPNDRRRIVASDVPTRTEAGLPEDGFV- 423
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
F FN KITP V W IL S L ++ P R E G++ +R
Sbjct: 424 FCCFNGTQKITPHVFDRWMEILKRTSGSVLWLLDSNP----ETNARLRDAAEARGVDRMR 479
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ P + N H+ Y L D+ LDT PY TT ++L+M VP +T +G A V S
Sbjct: 480 LVFAPK-MPNAFHLARYRLADLFLDTTPYGAHTTASDALWMAVPVLTWSGRSFASRVCGS 538
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
L+ GL L+ + YV+ A+++ SD LR +L + D A LE+
Sbjct: 539 LVRSAGLPELVVDSAAAYVEKAVEIGSDRARAQALRATLEANRDTCVLFDMDLLADKLET 598
Query: 539 TYRNMWHRYCKGDVP 553
Y M Y G P
Sbjct: 599 LYGEMIAEYQAGLRP 613
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 51 AVECYQMALSIKPNFSQ---SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107
A + Y++ + P+ Q +L N V+ G AAA +E+AI NP + AY NLG
Sbjct: 39 ADQAYKIWIKFNPDHPQLCVALFNRSVLQAALGDSVAAAASLEQAIQINPEFMPAYVNLG 98
Query: 108 VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145
L AG LAI +E AG NR + +N
Sbjct: 99 GLQERAGLQELAIATWE-----------AGANRPIVLN 125
>gi|88809832|ref|ZP_01125338.1| TPR domain protein [Synechococcus sp. WH 7805]
gi|88786216|gb|EAR17377.1| TPR domain protein [Synechococcus sp. WH 7805]
Length = 890
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/538 (25%), Positives = 213/538 (39%), Gaps = 57/538 (10%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLD---KAVECYQMALSIKPNFSQSLN 70
D A+ + A P A +NL + +L +A+E ++ L P L
Sbjct: 322 LDGAVADHSEALRLEPSLTIAGDNLLALALQLRSLGFTRQALEALRVILRATPQRPDLLL 381
Query: 71 NLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
LG G+++AA + + P E + LG G + A +
Sbjct: 382 QLGSTLMELGRVEAAVPCFRRLLRQRPELPEGHYQLGQALAALGHTEAGLHALNTAHTLA 441
Query: 131 PDSRNA--------------------GQNRLLAMNYINEGHDDKLFEA------------ 158
P++ + L + E D L
Sbjct: 442 PEATDVLTSLEWHRLSLCDWDDYDRRAARMLRQLQRYAESSDGPLVAPLTASLFALPPAL 501
Query: 159 HRDWGKRFMRLYSQYTSWDNTKDPER----PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQ 214
HR G+R+ + + P R L IGY+S D+ H++ + I HD +
Sbjct: 502 HRRLGERWSEPTRARIAGRHLPPPPRLNSQRLRIGYLSADFRDHAMGHLIHGVFSKHDRR 561
Query: 215 NYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGH 274
++V YS +DA + R+ V ++ + + +A +R D ID+L++L GH
Sbjct: 562 RFEVFAYSLSDISDAVSAAIRKGVDH----FKIVAADSSEAIAQQIRADGIDVLIDLMGH 617
Query: 275 TANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPEC 334
T + + ++A +PAP+Q+ ++GYP + G ID I D+ PPE + E + RLP
Sbjct: 618 THHGRPDVLARRPAPLQLHYLGYPGSLGADWIDGLIADTWLIPPEHDSHYRETVHRLPWA 677
Query: 335 FLCYTPSPEAGPVCPTPALTNGFI-------TFGSFNNLAKITPKVLQVWARILCAVPNS 387
F+ + E PALT I F F+ KITP W IL VP++
Sbjct: 678 FVSSSSLKECSDAA-QPALTRNDIGLPEDAVVFACFHRAEKITPMRFHCWLEILQQVPDA 736
Query: 388 RL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP 446
L ++ +P V R GL R+ P L + QA SL D+ LDT P
Sbjct: 737 LLWIINDQPL----VEERLRKKARAAGLGPQRLVFSP-KLESALFSQACSLADLLLDTSP 791
Query: 447 YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
Y+ T +L G+P ++ G A +G SL GL LI + Y Q A+ L
Sbjct: 792 YSSGATAVTALAAGLPLLSCPGENFASRMGASLCAATGLNELICSTPEAYQQKAIALG 849
>gi|380510752|ref|ZP_09854159.1| hypothetical protein XsacN4_06033 [Xanthomonas sacchari NCPPB 4393]
Length = 570
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 137/530 (25%), Positives = 224/530 (42%), Gaps = 55/530 (10%)
Query: 58 ALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG--- 114
AL ++P+ ++L LG V QG+ AA + +A+ P + LG D G
Sbjct: 48 ALQLRPDHPEALARLGRVRWTQGRHAEAAHALREALQQAPQHPGIAVWLGHAMEDNGEAE 107
Query: 115 -----------------SISL-------------AIDAYEQCLKIDPDSRNAGQNRLLAM 144
SI+ +DA Q ++ + G +
Sbjct: 108 AAAQAYAHAHALLPQEPSIAAYLLNWRRKLCDWRGLDALSQQVR---SAVRQGHPAIEPF 164
Query: 145 NYINE--GHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSY 202
++NE G D++L A R+ + R + + +D L IG++S + H
Sbjct: 165 AFLNEDAGADEQLRCA-RNRAQALARTVAPLPAAQVRRDGA--LRIGFLSNGFGAHPTGL 221
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRE 262
A L + + V+ + D ++ R ++ W ++ G ++ A +R+
Sbjct: 222 LTVA-LFERLRAHADLQVHLFALNGDDRSA-LRARLQSAAHAWHEVVGQPHRQTAQQIRD 279
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
ID+L +L G ++A +PAPVQ+ W+ YP T+G P IDY + D+ A PP
Sbjct: 280 AGIDLLFDLRGWGGGGTPEVLALRPAPVQLNWLAYPGTSGAPWIDYVVGDAYALPPALDA 339
Query: 323 KHVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITFGSFNNLAKITPKVLQVW 377
+ E ++RLP F PS + V P L F FNN K+ P+ +
Sbjct: 340 HYSERVLRLPRAF---QPSDDTRVVGTPPTRRDCGLPERGTVFCCFNNSYKLGPRSMARM 396
Query: 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSL 437
+L VP+S L + P D +T G++ R+ +P L + D++ Y
Sbjct: 397 LEVLRQVPDSVLWLLSGPGQADDRLRAAAAT---AGVDPTRLRFMP-KLAHPDYLARYRH 452
Query: 438 MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYV 497
D+ LDT PY TT ++L+ G P +T GS A V SL +GL + A ++ +V
Sbjct: 453 ADLFLDTHPYNAHTTASDALWAGCPVLTCPGSTFAARVAGSLNHHLGLDEMNAADDAAFV 512
Query: 498 QLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547
A++L D AL LR L + S + D Q FA + R+ R+
Sbjct: 513 ATAVRLGRDPAALQALRERLHARRADSGLFDMQGFADEFAALLRDTAARH 562
>gi|440733676|ref|ZP_20913367.1| hypothetical protein A989_18498 [Xanthomonas translucens DAR61454]
gi|440359550|gb|ELP96855.1| hypothetical protein A989_18498 [Xanthomonas translucens DAR61454]
Length = 569
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 170/367 (46%), Gaps = 16/367 (4%)
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPL-VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
PL IG++S + H A + + +V ++ A+ + D I R +
Sbjct: 205 PLQIGFLSNGFGAHPTGLLTVALFERLRAHADLQVQLF-ALNRDDGSAIGARLRAAAHA- 262
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
W D+ G + +A +R+ ID+L +L G ++A +PAP+Q+ W+ YP T+G
Sbjct: 263 -WHDVAGQPHRAIAQGIRDAGIDLLFDLRGWGGGGAPEVLALRPAPLQINWLAYPGTSGA 321
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFI 358
P IDY I D+ A P + E ++RLP F PS ++ + PA L
Sbjct: 322 PWIDYVIGDAFALPEALAAHYSERVLRLPRAF---QPSDDSRRIAAPPARRDCGLPEHGT 378
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
F FNN K+TP+ + +L V S L + P D+ R + ++ R
Sbjct: 379 VFCCFNNSYKLTPRSMTRMLAVLRQVQGSVLWLLSGPGQADA---RLHDAARRADVDPAR 435
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ +P L + D++ Y D+ LDT PY TT ++L+ G P +T G+ A V S
Sbjct: 436 LRFMP-KLAHADYLARYRHADLFLDTHPYNAHTTASDALWAGCPLLTCPGTTFAARVAGS 494
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
L +G+ + ++D +V A+QL D AL LR +L+ + + + D Q FA +
Sbjct: 495 LNHHLGMDAMNVADDDAFVAKAVQLGRDPAALRALRDTLQQRRASTGLFDMQGFAADFAA 554
Query: 539 TYRNMWH 545
R + H
Sbjct: 555 LLRGLAH 561
>gi|119510220|ref|ZP_01629358.1| TPR repeat protein [Nodularia spumigena CCY9414]
gi|119465170|gb|EAW46069.1| TPR repeat protein [Nodularia spumigena CCY9414]
Length = 743
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 181/376 (48%), Gaps = 22/376 (5%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR--FREKVMK 240
++ L IGY+S HSV + YH+ + +++ Y + + ++ FREK +
Sbjct: 375 KKVLKIGYISHCLREHSVGWIARWLFNYHNREEFQIYTYILLPTENNHNLQEWFREKSDQ 434
Query: 241 KGGIWRDIYGIDEK-KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPN 299
Y + +K + + D IDILV+L T + ++A +PAP+QVTW+G+ +
Sbjct: 435 SYS-----YQLSQKYEAVQQIHADGIDILVDLDSLTFDFVGEILAIKPAPIQVTWLGW-D 488
Query: 300 TTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY------TPSPEAGPV-CPTPA 352
TGL TIDY I D P + + E++ RLP+ ++ TP+ + P A
Sbjct: 489 ATGLSTIDYFIADEYVLPENAQDYYQEKIWRLPQTYVAVDGFEVNTPTLRREQLDIPEDA 548
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL 412
+ F+T + + LQ+ I+ VPNS L++K + S + +L +
Sbjct: 549 VVY-FVTQKGYKR--HLDHAKLQI--AIIKEVPNSYLLIKGEADEQASEKF-YLDLAKSQ 602
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
++ R LPL+ H SL D+ LDT+PY G TTT E+L+ +P VT G A
Sbjct: 603 NVDFNRFRFLPLVSSEAIHRANLSLADVVLDTYPYNGATTTLETLWREIPLVTKVGQQFA 662
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
+++ G+ IA +++EYV+ ++L D + LR +P+ +G+ F
Sbjct: 663 ARNSYTMMINAGITEGIAWSDEEYVEWGVRLGKDENLRQQISWKLRQGKKTAPLWNGEQF 722
Query: 533 ALGLESTYRNMWHRYC 548
+E+ YR MW Y
Sbjct: 723 TREMENAYRQMWEIYV 738
>gi|75908610|ref|YP_322906.1| hypothetical protein Ava_2394 [Anabaena variabilis ATCC 29413]
gi|75702335|gb|ABA22011.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 740
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 173/365 (47%), Gaps = 10/365 (2%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
IGY+S HSV + Y + + + Y V + K+ E +K+ G
Sbjct: 381 IGYLSSCLKIHSVGWLARWLFQYLNQDKFNINAY--FVNTNPKSDPLHEWYLKQVG---K 435
Query: 248 IYGIDEK-KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
+Y + ++A + +D+IDILV+L T N ++ +PAP+QVTW+G+ + +G P +
Sbjct: 436 VYKSNNSFEIAEQIYQDEIDILVDLDSITLNLICEVIGLKPAPIQVTWLGW-DASGSPAV 494
Query: 307 DYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFGSFN 364
DY I D P ++ + E++ RLP+ ++ + P L I + S
Sbjct: 495 DYFIADPYVLPEYAQEYYQEKIWRLPQTYIAVDGFEVSVPTIRREQLDIPRDAIVYFSGQ 554
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
K P ++ +I+ VPNS ++K + ++ F E+ G+E ++ LP+
Sbjct: 555 RGFKRHPHTTRLQLKIIKEVPNSYFLIKGVS-EEEGIKKFFEQLAEEEGVELSKLRFLPI 613
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
H ++DI LDT+PY G TTT E+L+M +P VT G A +++ G
Sbjct: 614 DSTEPIHRANLEIVDIVLDTYPYNGATTTLETLWMCIPMVTRVGEQFAARNSYTMMMNAG 673
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
+ IA ++EYV ++L D + L+ SP+ +G+ F +E+ Y MW
Sbjct: 674 IPEGIAWTDEEYVDWGVRLGKDEVLRQQIVWKLKQSRKTSPLWNGKQFTREMENAYEQMW 733
Query: 545 HRYCK 549
RY +
Sbjct: 734 LRYLE 738
>gi|194364498|ref|YP_002027108.1| hypothetical protein Smal_0720 [Stenotrophomonas maltophilia
R551-3]
gi|194347302|gb|ACF50425.1| Tetratricopeptide TPR_2 repeat protein [Stenotrophomonas
maltophilia R551-3]
Length = 570
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/525 (25%), Positives = 214/525 (40%), Gaps = 44/525 (8%)
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
+ + AL ++PN ++L LG V + G AA+++ +A A P + LG D
Sbjct: 42 QAARRALQLRPNHPEALARLGRVAWMAGAHGDAAKLLGQASALAPQHPGIALWLGHALED 101
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDW---GKRFMR 168
A A AY + + PD RL + + D D L R G+ +
Sbjct: 102 ADDAEGASAAYRRAHTLMPDEPYIAAQRLAWQRRLCDWQDVDALAAQVRGALASGQGVVE 161
Query: 169 LYSQYTSWDNTKD-------------------------PERPLVIGYVSPDYFTHSVSYF 203
++ + N + PL +G++S + H
Sbjct: 162 PFAFLSEDANAAEQLACARTRASAVTASVRPLPSAALRTRGPLRVGFLSNGFGAHPTGLL 221
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
A + A+ + D IR R + + D+ G+ A +R
Sbjct: 222 TVALFEQLRLDPALQLHLFALNRDDGSRIRQRLQAATQ---LHDVAGLRHADTATRIRAQ 278
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
ID+L +L G ++A PAP+Q+ W+ YP T+G P +D I D A PP +
Sbjct: 279 GIDLLFDLRGWGGGGTPEVLAMHPAPLQLNWLAYPGTSGAPWMDAVIGDDFALPPSLEPH 338
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITFGSFNNLAKITPKVLQVWA 378
+ E ++RLP F PS + P P L + F FNN K+ P+ +
Sbjct: 339 YSERVLRLPRAF---QPSDNTRVLEPAPTRADCGLPEHGVVFCCFNNSYKLNPRSMGRAF 395
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
+L AVP S L + P D+ R + + GL+ +R+ +P L + ++ Y L
Sbjct: 396 AVLQAVPGSVLWLLSGPGQADA---RLRAAAQSAGLDPMRLVFMP-KLPHPQYLARYQLA 451
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D+ LDT PY TT ++L+ G P +T G+ A V SL +GL + A ++ ++
Sbjct: 452 DLFLDTNPYNAHTTASDALWAGCPVLTCPGATFAARVAGSLNHHLGLARMNAADDAAFIA 511
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
A L +D AL LR L S + D FA L + + +
Sbjct: 512 TASVLGNDPAALTALRAELAQAREHSGLFDMAGFAHDLSALLQKL 556
>gi|381166882|ref|ZP_09876095.1| Predicted O-linked N-acetylglucosamine transferase [Phaeospirillum
molischianum DSM 120]
gi|380683934|emb|CCG40907.1| Predicted O-linked N-acetylglucosamine transferase [Phaeospirillum
molischianum DSM 120]
Length = 658
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/511 (26%), Positives = 222/511 (43%), Gaps = 23/511 (4%)
Query: 49 DKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
+ A+ + ++ I P ++ LG QG+ D AAE + A+ +P A +L
Sbjct: 154 EAAIPALEHSVRIHPGIAELHALLGQALLRQGRYDEAAERLNLALKIDPNLQPAKGHLLR 213
Query: 109 LYRDAGSISL--AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166
R+ A+ A + P S + A+ Y +G++ + A +
Sbjct: 214 ACRETADWDQEEALFAEIRAGLSAPSSARLTISTQDALFYPFDGNELRKIAAAEAAFRVP 273
Query: 167 MRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVK 226
R T P PL + Y+SPD+ H+ + +HD +VV +A V
Sbjct: 274 GRPRPVARPRTTTTSP--PLTVAYLSPDFREHATMHLAGDLFGHHDRARVRVV--AASVG 329
Query: 227 ADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQ 286
D + +R ++ ++ D+ + ++ A + + ++ILV+++ +T + + G+ A +
Sbjct: 330 PDDGS-DWRRRIAADCDLFLDLSTLGDRAAANRLAAEGVNILVDMSVYTRHARPGIAALR 388
Query: 287 PAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF---LCYTPSPE 343
PAPVQ+ W+G ++ P IDY I D + PP + E LI LP + L + P
Sbjct: 389 PAPVQIAWLGLAASSSAPWIDYAIVDPVLVPPPHRNHFSEALIFLPHGYQANLAWKPL-- 446
Query: 344 AGPVCPTP----ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD 399
+ P P L + + F SFN K+ +W R+L AVP S L P
Sbjct: 447 ---IAPPPRSELGLPDDGVVFCSFNGHRKLDRATFSLWMRVLAAVPGSVLWQLAPPPIA- 502
Query: 400 SVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM 459
R R G+ R+ P + + +H++ D+ LD TT ++L M
Sbjct: 503 --RTRLEQAAIAAGIAPERLIWAPRLPWD-EHLKRLPAADLFLDALVCGAHTTAADALRM 559
Query: 460 GVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRD 519
GVP +T AG A V SLL +GL LI + + +A +LA A LR L
Sbjct: 560 GVPLLTCAGPRLASRVAASLLESIGLPELITPSPEGMFNMARELALAPARRAALRARLAT 619
Query: 520 LMSKSPVCDGQNFALGLESTYRNMWHRYCKG 550
L+ ++ D + FA LE+ Y +W R G
Sbjct: 620 LLPQAAAFDPRGFARDLETAYEQVWMRASAG 650
>gi|78183697|ref|YP_376131.1| O-linked N-acetylglucosamine transferase [Synechococcus sp. CC9902]
gi|78167991|gb|ABB25088.1| O-linked N-acetylglucosamine transferase SPINDLY family-like
[Synechococcus sp. CC9902]
Length = 726
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 175/371 (47%), Gaps = 18/371 (4%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
+ PL I ++S D+ H V F+ +K ++ T E +
Sbjct: 359 QEPLTILWLSSDFSYHPVGRFLYGYFSALSSPIHKHIIVDLNDHGVESTRYLFEPLTSVE 418
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
I I +D + +R DI V+L+G T+ + + +P+QVT++GY +T
Sbjct: 419 SI--CIPRLDLPDRVSDIRNLNADIAVDLSGWTSGHFMPGFLSNLSPIQVTYLGYFASTF 476
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP---EAGPVCPTPALTNGF-I 358
P+IDY + DS P ++ H E + RL CFL + P E+ P+ T+ I
Sbjct: 477 NPSIDYWLGDSQLFPDTMQESHTESIWRLGRCFLAWQPPSALVESSLDVPSSPFTSSTGI 536
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCK------PFCCDSVRHRFLSTLEQL 412
FGSFN+ K++ + LQ+W +I+ +VP S LV+K F S R R +
Sbjct: 537 RFGSFNHHRKLSNETLQLWGKIINSVPGSSLVLKMGESDDPGTFTLLSKRMR------RA 590
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
GL+ R+ +P H+ YSL+D++LD FP G TTTCE+L+MGVP +T G+ +
Sbjct: 591 GLDPERITWIPRPRDTVQHLNQYSLVDVALDCFPNGGCTTTCEALWMGVPVITSTGNSYV 650
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
+ ++L L + ++ +Y A+ A +++ L R R + SP+ + +
Sbjct: 651 SRMSSAVLHGANLPNWCLSSKSQYFDFAVLQAENLSWLRANRHYWRQKLINSPLGNASDL 710
Query: 533 ALGLESTYRNM 543
+E + M
Sbjct: 711 MTHIELAFSKM 721
>gi|344345323|ref|ZP_08776177.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
gi|343803152|gb|EGV21064.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
Length = 544
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 150/283 (53%), Gaps = 5/283 (1%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ N G A E+ + + A Y A P A+A NLG + +A++ Y+ AL+
Sbjct: 265 LNNRGNALVELGRLEAAQQSYLDALRVRPDYADAYCNLGNVLDLLCKPLQAIDSYRRALA 324
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
+KP+ +++ NLG V + A E+A+A P Y EA +NLG L +D G +I
Sbjct: 325 LKPDLAEASLNLGNVLRDLDHLSEALVCYERALATRPDYPEALSNLGCLLQDLGDFDASI 384
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF-MRLYSQYTSWDNT 179
A E + DS A + L +NY + +++ A+RD+ +R+ + + + NT
Sbjct: 385 AAREHARTLSHDSFAADSSLLFTLNYHPDRSAEEIRAAYRDYERRYAVPARGHWRAHTNT 444
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVM 239
+D ER L +GYVSPD+ +H + Y +E L +HD +++ Y+ + + DA+T R+R V
Sbjct: 445 RDAERRLRLGYVSPDFRSHVIRYMLEPLLEHHDRARFELHAYAELTREDAQTARYRSLVD 504
Query: 240 KKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGM 282
W G+ + ++AA +R D IDILV+L GHTA G+
Sbjct: 505 H----WVPTRGLSDGELAARIRADGIDILVDLAGHTAATGWGV 543
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG+A E + D A+ Y A +P +ACNN G + L +A++ + AL+
Sbjct: 164 YNLGLALHEFGRLDEALKCYVRANAIDPELPQACNNAGNVCNQLGRLQQAIDWFSRALAQ 223
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P + LNNL +AA +E+A+A P +AEA NN G + G + A
Sbjct: 224 DPRNADVLNNLASAQIRACLFEAALRTLERALALVPDHAEALNNRGNALVELGRLEAAQQ 283
Query: 122 AYEQCLKIDPDSRNA 136
+Y L++ PD +A
Sbjct: 284 SYLDALRVRPDYADA 298
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ +Y P AEA NLG+ + LD+A++CY A +I P Q+ NN G V
Sbjct: 145 ALGYYRRTLEVAPDHAEAHYNLGLALHEFGRLDEALKCYVRANAIDPELPQACNNAGNVC 204
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
G++ A + +A+A +P A+ NNL A A+ E+ L + PD A
Sbjct: 205 NQLGRLQQAIDWFSRALAQDPRNADVLNNLASAQIRACLFEAALRTLERALALVPDHAEA 264
Query: 137 GQNR 140
NR
Sbjct: 265 LNNR 268
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ E A P E N + + A+ Y+ L + P+ +++ NLG+
Sbjct: 111 ALTVLEGALALEPRDPEILNAIATALLRLGRGEDALGYYRRTLEVAPDHAEAHYNLGLAL 170
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
G++D A + +A A +P +A NN G + G + AID + + L DP RNA
Sbjct: 171 HEFGRLDEALKCYVRANAIDPELPQACNNAGNVCNQLGRLQQAIDWFSRALAQDP--RNA 228
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG+I R + +A+ + AL+++P + LN + G+ + A + + P
Sbjct: 98 LGLILLRRRHHAEALTVLEGALALEPRDPEILNAIATALLRLGRGEDALGYYRRTLEVAP 157
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+AEA+ NLG+ + G + A+ Y + IDP+
Sbjct: 158 DHAEAHYNLGLALHEFGRLDEALKCYVRANAIDPE 192
>gi|166363525|ref|YP_001655798.1| hypothetical protein MAE_07840 [Microcystis aeruginosa NIES-843]
gi|166085898|dbj|BAG00606.1| hypothetical protein MAE_07840 [Microcystis aeruginosa NIES-843]
Length = 264
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 142/269 (52%), Gaps = 12/269 (4%)
Query: 283 MACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP 342
MA +PAP+QVTW+G + +G+P IDY I D+ P ++ + E++IRLP +L
Sbjct: 1 MALKPAPIQVTWLGL-DASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLS-VDGF 58
Query: 343 EAGPVCPTPALTN-----GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC 397
E G PT T+ I + + + K T ++ + +IL VPNS +++K F
Sbjct: 59 EVG--VPTRRRTDLNIPDDAIIYLTVQSGLKRTLNMICLQLQILQQVPNSYILIKG--FA 114
Query: 398 -CDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
+++R FL + ++LG+ R+ LP H + DI LDT+PY+G TTT E+
Sbjct: 115 DKETIRELFLKSADELGISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLET 174
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMS 516
L+MG+P VT G A + + G+ IA +++EYVQ ++L D +R
Sbjct: 175 LWMGIPLVTRVGEQFAARNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDENLREEVRYQ 234
Query: 517 LRDLMSKSPVCDGQNFALGLESTYRNMWH 545
LR SP+ + + F LE+ Y+ MW+
Sbjct: 235 LRQSRHTSPLWNAKQFTRDLETAYQQMWN 263
>gi|428176588|gb|EKX45472.1| hypothetical protein GUITHDRAFT_108736 [Guillardia theta CCMP2712]
Length = 710
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 210/509 (41%), Gaps = 69/509 (13%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P +A NNLG ++A Y A+ P + N+G + + + + A +
Sbjct: 151 PGYGDAYNNLGNCLMSMSRFEEAGASYGYAIRANPKEANYYVNMGGI-SARKNLTAGIQY 209
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+E+ +A NP + EAYNNL RD G + A++AY+ LK+ PDS + N A Y+
Sbjct: 210 LEQGLALNPFFPEAYNNLANFKRDVGDLEGAVEAYKNALKLMPDSGDIMVNMASAKAYLC 269
Query: 149 EGHDDKLF---------EAHRDWGK---------------RFMRLYSQYTS--------- 175
+ + K F + RD K ++ ++Y S
Sbjct: 270 DWRNRKSFLKRIIEVSRKELRDGKKLSLSTFYANIFGVDLELLKKVAEYHSNSAFSSVRY 329
Query: 176 ------WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA 229
W E + +G +S D H V + I A L + V+ Y+ +
Sbjct: 330 LLPLKPWFTADVREGGIRLGILSSDLTNHIVGHGIAALLPLMQERGATVLCYALSSDDGS 389
Query: 230 KTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAP 289
R E+ K DI + A + DK+ +L++L G T N++ +++ +PA
Sbjct: 390 HPRRQIEQYSK----LTDIRDWSTEAAARHINADKLHVLLDLNGQTKGNRIEILSLRPAA 445
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP------- 342
VQV + GY T+G ID + D + PPE E+L+ P F +
Sbjct: 446 VQVLFHGYAGTSGANFIDLFVADRILVPPEFSGFMTEKLMLFPPAFSFFLVEDYGRLDDR 505
Query: 343 --------EAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCK 394
A V + + + SFN+L K+TP V W +IL V +S L +
Sbjct: 506 EHEEDGEYAARSVGKELGIGPSYFRYASFNSLYKLTPSVFGAWMKILSQVDSSILWLLKF 565
Query: 395 PFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDISLDTFPYAGTT 451
P S R + G++ R+ DL P +H+Q S + LDT Y +
Sbjct: 566 P---SSAEKRLRKEAKARGVDDKRLVFTDLYP----RAEHLQKKSGASLFLDTLVYNAHS 618
Query: 452 TTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
+ +SL GVP ++MAGS + V SLL
Sbjct: 619 SAADSLASGVPVLSMAGSGIVNRVAASLL 647
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A +NLGV+ K+ L+ A CY +A + P G V ++ A + +A
Sbjct: 88 AASNLGVVMKEEGLLNLAERCYILASRLDPAGPTHAYRRGNVRMAMQDLETARKAFLRAT 147
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN---------AGQNRLLAM 144
P Y +AYNNLG A +Y ++ +P N A +N +
Sbjct: 148 RLLPGYGDAYNNLGNCLMSMSRFEEAGASYGYAIRANPKEANYYVNMGGISARKNLTAGI 207
Query: 145 NYINEG 150
Y+ +G
Sbjct: 208 QYLEQG 213
>gi|328699992|ref|XP_003241117.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Acyrthosiphon pisum]
gi|328699994|ref|XP_003241118.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 3 [Acyrthosiphon pisum]
gi|328699996|ref|XP_003241119.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 4 [Acyrthosiphon pisum]
gi|328699998|ref|XP_001952129.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Acyrthosiphon pisum]
Length = 1108
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 148/640 (23%), Positives = 263/640 (41%), Gaps = 114/640 (17%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFN-PHCAEACNNLG-VIYKDRDNLDKAVECYQMALS 60
++ + Y E + AI +Y++A P AC NL ++Y+ NL+ A+ Y+ AL
Sbjct: 485 DIAIIYEEYGISEKAIDYYKMAIQLQQPTHYNACLNLANILYRLNINLNDALTHYEKALE 544
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++G +YT + A AI +P EAY +G + +D+ + AI
Sbjct: 545 YDNTSVDVYIHMGNIYTELNRSKDALRCFYMAIQHDPHCLEAYMYIGSIQKDSDNFIEAI 604
Query: 121 DAYEQCLKIDPD-------------------SRNAGQNRL--LAMNYINEG-------HD 152
AYE LK+ PD +A N+L + +N+ HD
Sbjct: 605 RAYEFVLKLKPDLPDVYCNLVRCLLTICDWSDYDAHVNKLQEIVNKQLNDDDMLSLLPHD 664
Query: 153 DKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERP---------------LVIGYVSPDYFT 197
+F + + Y++ K E P L IG+VS ++
Sbjct: 665 ALMFPLSIEVQTKIASKYAKNCVEKLKKSIEGPQQFVHPTSLISSNGNLRIGFVSTNFGK 724
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW---RDIYGIDEK 254
H ++ +E+ +DYQ ++ YS I + + ++ +D+ +
Sbjct: 725 HPITTIMESLSSLYDYQ-VDIICYS---------ISSNDNIPPWLNLFEGHKDLSQLKFI 774
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
A ++ D I ILV+++G+ + + A +PAP+QV+W+G P+T+ +DY ITD +
Sbjct: 775 DAAKVINNDGIHILVDMSGYIKGAQTEIFALRPAPIQVSWLGCPSTSVTTFMDYLITDKI 834
Query: 315 ADP---------------------------PETKQKHVE------------------ELI 329
P P +Q+ V+ +L+
Sbjct: 835 CSPPELQHLYTEKWVYTNQTIFVGDHKQKFPNLRQRKVDNTNNIMHQGVYLNGNDVNDLV 894
Query: 330 RLPECFLCYTPSPEAGPVC-PTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSR 388
+ ++ T L + F +F+ L KI P ++W IL VPNS
Sbjct: 895 SVETTYIEVELEESVKSYYRSTFNLPENVVVFCNFSKLYKIDPFTFRMWLNILNNVPNSV 954
Query: 389 LVVKCKPFCCDSVRHRFLSTLEQLGLESLRV---DLLPLILLNHDHMQAYSLMDISLDTF 445
L + D + + + L ++ R+ D +P + H+ L DI LDT
Sbjct: 955 LWL---LHLSDIAENNLRTFADHLNFDTSRIIFADFIP----KYQHLNRIQLADIYLDTH 1007
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
G ++++ GVP +T+ G + V S LT +G+ IA+NE+ Y+++A+QL
Sbjct: 1008 LCNGHIACLDAIWAGVPVITLPGDTYESRVTASQLTTLGIADTIAQNEENYIEIAIQLGL 1067
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
+ AL N+R ++ + S + D +A + +NMW+
Sbjct: 1068 NKLALENIRKNIWEFKMHSDLFDINVYAKDIILILKNMWN 1107
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 1 MYNLGVAYGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQ 56
+Y + YG++L + A +++A + C + NL +Y +KA+ Y+
Sbjct: 220 LYKVHNKYGKLLLKLNRIKEAKKHFKIANNCATECPDTLKNLADVYYLIGKFEKAISKYK 279
Query: 57 MALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI 116
AL I P+ + LG+ + + AA + KA+ P +L V Y ++
Sbjct: 280 KALEINPDLINAYFYLGMAHLKVTEFQNAANIFLKALELEPENVSVLRSLAVTYCFQENM 339
Query: 117 SLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
L ++ Y++CLK+ P++ N N LA+ Y++
Sbjct: 340 LLCVEVYKKCLKLQPEAFNL--NLELALIYLH 369
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 26 HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA 85
H N ++AC ++G +Y + D+ + A + A+ + P + +G+ G +D A
Sbjct: 408 HLNA--SDACMSIGDLYLESDDQENARNAFFCAILLNPRNAFGHWKVGLTMYNLGHLDLA 465
Query: 86 AEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI-DPDSRNAGQNRLLAM 144
+ AI PT A AY ++ ++Y + G AID Y+ +++ P NA N +
Sbjct: 466 LTRYKHAIELKPTLANAYCDIAIIYEEYGISEKAIDYYKMAIQLQQPTHYNACLNLANIL 525
Query: 145 NYINEGHDDKL--FEAHRDWGKRFMRLYSQ----YTSWDNTKDPER 184
+N +D L +E ++ + +Y YT + +KD R
Sbjct: 526 YRLNINLNDALTHYEKALEYDNTSVDVYIHMGNIYTELNRSKDALR 571
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
N +K ++C ++A +I PN S+ L+N +VY + + D A E + K P +A+ +
Sbjct: 134 NYEKCIDCLEIANNINPNCSEVLSNFALVYMKKSENDLAKEYLFKVCTIKPFCVDAWTDY 193
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPD---SRNAGQNRLLAMNYINEG 150
+ A AYE+ L + P+ N LL +N I E
Sbjct: 194 ADFLFKTNDLITAELAYERVLSLKPELYKVHNKYGKLLLKLNRIKEA 240
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
YE P + N G + + + +A + +++A + +L NL VY + G
Sbjct: 210 YERVLSLKPELYKVHNKYGKLLLKLNRIKEAKKHFKIANNCATECPDTLKNLADVYYLIG 269
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
K + A +KA+ NP AY LG+ + A + + + L+++P+ N R
Sbjct: 270 KFEKAISKYKKALEINPDLINAYFYLGMAHLKVTEFQNAANIFLKALELEPE--NVSVLR 327
Query: 141 LLAMNY 146
LA+ Y
Sbjct: 328 SLAVTY 333
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LG+A+ ++ +F A + A P +L V Y ++N+ VE Y+ L +
Sbjct: 293 FYLGMAHLKVTEFQNAANIFLKALELEPENVSVLRSLAVTYCFQENMLLCVEVYKKCLKL 352
Query: 62 KPN-FSQSLNNLGVVY--TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
+P F+ +L L ++Y +Q +A ++K I NP + + NL V YR +
Sbjct: 353 QPEAFNLNLE-LALIYLHNLQNYQEAVI-YLKKCIQLNPNRIDLFKNLFVAYRKSND--- 407
Query: 119 AIDAYEQCLKI 129
++A + C+ I
Sbjct: 408 HLNASDACMSI 418
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A NP A +G+ + +LD A+ Y+ A+ +KP + + ++ ++Y G +
Sbjct: 438 AILLNPRNAFGHWKVGLTMYNLGHLDLALTRYKHAIELKPTLANAYCDIAIIYEEYGISE 497
Query: 84 AAAEMIEKAIA-ANPTYAEAYNNLG-VLYRDAGSISLAIDAYEQCLKIDPDS 133
A + + AI PT+ A NL +LYR +++ A+ YE+ L+ D S
Sbjct: 498 KAIDYYKMAIQLQQPTHYNACLNLANILYRLNINLNDALTHYEKALEYDNTS 549
>gi|429122364|ref|ZP_19182947.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter sakazakii 680]
gi|426323139|emb|CCK13684.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[Cronobacter sakazakii 680]
Length = 907
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 135/253 (53%), Gaps = 8/253 (3%)
Query: 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
N+LG +Y G++ A + +A P +GV+ D + A E+ L+I
Sbjct: 632 NSLGAIYHASGEVTLAEKCAREAFRFQPRNPRYLGMMGVVLSDNQKLDEARYFLEKSLEI 691
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT---SWDNTKDPERPL 186
P+ + + L M + N +L HRD+G+R ++ +N KDP R L
Sbjct: 692 APEDFDCFTSLLFVMTHDNRVSTQELLAKHRDYGERVTAAAARSALELPLNNVKDPNRKL 751
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWR 246
+G+VS D H VS F+ D +++V Y+A AD T + + +WR
Sbjct: 752 RVGFVSGDLRDHPVSNFLLPFWDSFDRTQFELVGYNAAPMADEVT----DHLSAGAVLWR 807
Query: 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTI 306
D+Y + ++++A + +D +DIL++L+GHT +L M A +PAP+Q+TWIGYP TTG+P +
Sbjct: 808 DVYQLSDRELARQINDDGVDILIDLSGHTTWTRLPMFALRPAPLQMTWIGYPGTTGVPAM 867
Query: 307 DYR-ITDSLADPP 318
DYR I+ +LA PP
Sbjct: 868 DYRVISSTLASPP 880
>gi|427733983|ref|YP_007053527.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rivularia sp. PCC 7116]
gi|427369024|gb|AFY52980.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rivularia sp. PCC 7116]
Length = 832
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 135/548 (24%), Positives = 242/548 (44%), Gaps = 58/548 (10%)
Query: 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGV 74
+ AI Y+ A + P AEA NLG ++K + + A+E YQ AL IKP+ + NLG
Sbjct: 62 EAAITSYQQAINLKPEYAEAYCNLGNLFKKQGKVSAAIESYQKALKIKPDLVEVYCNLGN 121
Query: 75 VYTVQGKMDAAAEMIEKAIAANPTYAEA-----YNNLGVLYRDAGSISLAIDAYE----- 124
+ QG AA E +KA+ P A A + L ++YR I L D Y+
Sbjct: 122 LLKKQGNRSAAIESYQKALKIKPNLARAKFFTCIHQLPIIYRTFTEIQLKRDNYQRYLKD 181
Query: 125 ----------QCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQY- 173
Q LK D+ A Q LA +N+ K++ G + + S
Sbjct: 182 LAKNYQQACSQELKKAADAVGASQPFYLAYQGLNDRDLQKIY------GDMIVGIMSHRY 235
Query: 174 -TSWDNTKDPE----RPLVIGYVSPDYFTHSVSYFIEAPLVYH-DYQNYKVVVY--SAVV 225
+ N P+ + + IG+VS + HSV V + D +++ Y + +
Sbjct: 236 PQNSQNISLPDLQANQKIRIGFVSACFHRHSVWKIPMKGWVENLDRSQFELFAYHTNTTL 295
Query: 226 KADAKTIR----FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLG 281
K D +T++ F + + I +K ++++DK+ +L+ L
Sbjct: 296 KHDGETVKAVQAFDKFIKGPASI---------EKWTKIIQQDKLHVLIFPEFGMDPTTLQ 346
Query: 282 MMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPS 341
+ + AP+Q+T G+PNT+GLPTIDY ++ L +P ++ + E+L++LP + Y P
Sbjct: 347 LGCLRLAPIQMTSWGHPNTSGLPTIDYYLSSELMEPENAQEYYTEKLVKLPNLSIYYHPQ 406
Query: 342 PEAGPVCPTP---ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV--KCKPF 396
P P+ T + + + F +L K P+ V+ +I + N + V
Sbjct: 407 P-ISPLKVTKQDIGIIDNAVMFWCCQSLYKYLPQHDDVFPQIAGNLDNCKFVFIENEGEG 465
Query: 397 CCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCES 456
+ R R L+ + + ++ D+ LD+ ++G +T E+
Sbjct: 466 VTEVFRQRLEKAFGDFALDYQDYCIFLPRMKARKFAGTAAIADVFLDSIGWSGCNSTLEA 525
Query: 457 LYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMS 516
+ +P VT+ G +++L + ++ IA N++EY+++A+ L D A R
Sbjct: 526 IAHDIPVVTLPGEFMRARHSMAILKMMNIEETIASNKEEYIKIAIHLGRD----AQYRQY 581
Query: 517 LRDLMSKS 524
L +L++++
Sbjct: 582 LSELVAQN 589
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 71/120 (59%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+F+ AI +Y+ NP+ AE +L + N + A+ YQ A+++KP ++++ NL
Sbjct: 26 QFEAAITYYQQILEINPNFAEVYASLAEAQEKAGNSEAAITSYQQAINLKPEYAEAYCNL 85
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G ++ QGK+ AA E +KA+ P E Y NLG L + G+ S AI++Y++ LKI P+
Sbjct: 86 GNLFKKQGKVSAAIESYQKALKIKPDLVEVYCNLGNLLKKQGNRSAAIESYQKALKIKPN 145
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y LG+ + + A F LA P + C LG +Y+ + NL A + Y+ A++
Sbjct: 659 LYGLGILAQQKGELQQAEEFLSLAAREQPDSVKICFTLGNLYQLQKNLSAAEDAYKKAIN 718
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG-VLYRDA 113
++ + + NNLG QGK + A + +KA+ P EA NLG VL+R A
Sbjct: 719 LRSDAAPIHNNLGYTLEQQGKWEEALKCYQKALEIQPNCIEADANLGNVLHRIA 772
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y P EA LG++ + + L +A E +A +P+ + LG +Y +Q
Sbjct: 645 YRKVLAIQPKHPEALYGLGILAQQKGELQQAEEFLSLAAREQPDSVKICFTLGNLYQLQK 704
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ AA + +KAI A +NNLG G A+ Y++ L+I P+ A N
Sbjct: 705 NLSAAEDAYKKAINLRSDAAPIHNNLGYTLEQQGKWEEALKCYQKALEIQPNCIEADAN 763
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
+ L+ + + Y+ L+I+P ++L LG++ +G++ A E + A P +
Sbjct: 636 NRLESSEQAYRKVLAIQPKHPEALYGLGILAQQKGELQQAEEFLSLAAREQPDSVKICFT 695
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPDS 133
LG LY+ ++S A DAY++ + + D+
Sbjct: 696 LGNLYQLQKNLSAAEDAYKKAINLRSDA 723
>gi|398376282|ref|ZP_10534464.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rhizobium sp. AP16]
gi|397727476|gb|EJK87900.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Rhizobium sp. AP16]
Length = 691
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 142/565 (25%), Positives = 238/565 (42%), Gaps = 61/565 (10%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA-------AEMI 89
N V + ++ ++ + L + P F + NLG G A E+
Sbjct: 71 NYSVTLRQLGDVAGSIHALRACLKLDPRFGPAHINLGRALEDSGIATQAILQWRSFVELT 130
Query: 90 EKAIAANPTYAE-AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN--------- 139
+ A + A ++G + +AG + A Q +++ PD AGQ+
Sbjct: 131 ADSTADRLAHRLLALQHIGRVMENAGLLEDAETTLWQAMELRPDKTEAGQHWSALRQRQC 190
Query: 140 ---RLLAMNYINEGH--------------DDKLFEAHRDW-------GKRFMRLYSQYTS 175
L++ ++++ H DD LF+ + + G+ +++ T
Sbjct: 191 KWPTLVSSDHVSIRHLLDAMSPLTLACFSDDPLFQLAKAYRYNKSFVGRPDTSGFTRKTP 250
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIR 233
T+ +R L +GYVS D H+V + + L HD ++ ++ Y V+ DA R
Sbjct: 251 KQKTRTGQR-LRVGYVSSDLRDHAVGFALREVLELHDKRSVEIYAYYCGDPVQGDATQAR 309
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
+ V WRDI + + A + +D IDILV++ G+T + + + A +PAPV V
Sbjct: 310 MKAVV----DCWRDIGALSDADAARQIADDDIDILVDVNGYTKHARTKIFAYRPAPVVVN 365
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA- 352
+ GYP T G P Y I D PPE + E+++R+ C P + P+
Sbjct: 366 FCGYPGTMGSPFHHYIIADEHIIPPENEIYFSEKVLRIA----CNQPIDRKRVIAERPSR 421
Query: 353 ----LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
L + FN + KIT + W +IL S L + D V R L
Sbjct: 422 AEAGLPEDVFVYACFNGMQKITQETFAHWMKILSGTTGSVLWLLTG---GDDVDKRLLQL 478
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
E G+ R+ P N H+ ++ D+ LDTFPY +T ++L MG+P +T G
Sbjct: 479 AENAGVAPERLIFAPKA-PNAKHLARIAVADLFLDTFPYGAHSTAGDALTMGLPVLTFPG 537
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A S++ G+ LI N ++Y++ A+ A+ +L +R SL+ S + D
Sbjct: 538 KSFAARFCHSIVAAAGVPELICSNPEDYIERAIGFANTPRSLREIRESLQAKRETSALRD 597
Query: 529 GQNFALGLESTYRNMWHRYCKGDVP 553
A LE + M +G+ P
Sbjct: 598 IPALARRLEELFWQMQAECERGETP 622
>gi|257060651|ref|YP_003138539.1| family 2 glycosyl transferase [Cyanothece sp. PCC 8802]
gi|256590817|gb|ACV01704.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802]
Length = 1252
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 230/540 (42%), Gaps = 85/540 (15%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
NNLG++ +++ ++++ CY ALSIKPN++ N+LG+ + ++ A + +KA+
Sbjct: 61 NNLGIVLQEKQQFEESINCYYQALSIKPNWADVHNDLGIAFEKLDNLEEAFQHYQKALTL 120
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA-MNYINEGHDDK 154
NP A+A N+G + G A+ Y++ L+I+PD A L+ + YI +DD
Sbjct: 121 NPNLAQASFNIGNILYQRGYFEEALTYYQKALEINPDFNLAHFALLMKQIPYIYSSYDDL 180
Query: 155 LFEA-------------------------------------------HRDWGKRFMRLY- 170
F RD + + L
Sbjct: 181 QFRRTNYQNYLQHLVKIVQKASLEEKNNLAKAVGSSQPFFLPYQGLNDRDLQQIYGNLIC 240
Query: 171 ----SQYTSWD-----NTKDPERPLVIGYVSPDYFTHSVSYF-IEAPLVYHDYQNYKVVV 220
S Y W +T + R + IG+VS + HSV ++ + D +++
Sbjct: 241 HLMASLYPQWSQPLALSTLEVNRKIRIGFVSGFFHNHSVWKIPLKGWVRNLDRSRFELFA 300
Query: 221 YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILV--ELTGHTANN 278
Y K D +T K R I ++ + EDK+ L+ E+ T
Sbjct: 301 YYTSYKEDGETFIASRSFDKFIQGHRTI-----EQWCQTIVEDKLHALIFPEIGMDTVTT 355
Query: 279 KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY 338
++ + AP+Q+T G+PNT+G+PTIDY ++ L + + + E+L+RLP + Y
Sbjct: 356 QIACLRL--APIQMTSWGHPNTSGMPTIDYYLSSDLMESDTAQDYYTEKLVRLPNLSIYY 413
Query: 339 TPSPEAGPVCPTP---ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV---- 391
P P + L + F +L K P+ V+ +I +PNS+ V
Sbjct: 414 NPLEYVQPKAISKEDIGLKVDDVMFWCCQSLYKYLPQHDDVFPKIAQQLPNSKFVFIEGQ 473
Query: 392 KCKPFCCDSVRHRFLSTLEQLGLESL-------RVDLLPLILLNHDHMQAYSLMDISLDT 444
K + R + EQ GL R+D+L ++ DI+LD+
Sbjct: 474 KNIKNITEIFVQRLRKSFEQFGLNYQDYCIFLPRMDVLTF-------AGTAAIADINLDS 526
Query: 445 FPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
++G +T ES+ +P VT A +++L +G++ IA ++D Y+++A+ L
Sbjct: 527 LGWSGCNSTLESIAHNIPVVTFAADFMRGRHTMAILKMIGIEETIASSKDNYIEIAVHLG 586
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 25/154 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG Y E +F AI Y+ A P+ NNLG + + + ++A+ CYQ AL I+
Sbjct: 698 SLGNLYQEKKQFSQAINAYQQALLLEPNLVAVYNNLGYVLQQQSQWEEAISCYQKALEIQ 757
Query: 63 PN-------------------------FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
PN ++Q LG+ QG + A E ++ I P
Sbjct: 758 PNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQLGIKQEQQGNLATAIECYQQGIKLQP 817
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
AE Y+NLGV ++ G + AI AY+ L ++P
Sbjct: 818 ESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNP 851
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNL------------------------ 38
NLG + +++ AI Y+ A P+C EA NL
Sbjct: 732 NLGYVLQQQSQWEEAISCYQKALEIQPNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQ 791
Query: 39 -GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
G+ + + NL A+ECYQ + ++P ++ +NLGV + QGK++ A + A+ NP
Sbjct: 792 LGIKQEQQGNLATAIECYQQGIKLQPESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNP 851
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+ Y +LG +Y+ + A AY++ LK+
Sbjct: 852 QQGKTYFSLGQIYQVQNQLKKASSAYQKGLKL 883
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y LGV ++ +FD A + P A+A +LG +Y+++ +A+ YQ AL
Sbjct: 662 LYGLGVLAHQIGEFDYAEQLFNDLLKVQPKSAKAWMSLGNLYQEKKQFSQAINAYQQALL 721
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN--------------- 105
++PN NNLG V Q + + A +KA+ P EA N
Sbjct: 722 LEPNLVAVYNNLGYVLQQQSQWEEAISCYQKALEIQPNCVEAEINLANVLHSQNKLPPEQ 781
Query: 106 ----------LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
LG+ G+++ AI+ Y+Q +K+ P+S N L + + +G ++
Sbjct: 782 QIQYAQLNLQLGIKQEQQGNLATAIECYQQGIKLQPESAEIYHN--LGVAWQKQGKLEEA 839
Query: 156 FEAHRD 161
A+++
Sbjct: 840 IAAYQN 845
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
++L A E Y L+ +P SL LGV+ G+ D A ++ + P A+A+ +
Sbjct: 639 NDLTGAKEAYNRILAREPKHPDSLYGLGVLAHQIGEFDYAEQLFNDLLKVQPKSAKAWMS 698
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPD 132
LG LY++ S AI+AY+Q L ++P+
Sbjct: 699 LGNLYQEKKQFSQAINAYQQALLLEPN 725
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P ++ LGV+ D A + + L ++P +++ +LG +Y + + A
Sbjct: 656 PKHPDSLYGLGVLAHQIGEFDYAEQLFNDLLKVQPKSAKAWMSLGNLYQEKKQFSQAINA 715
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
++A+ P YNNLG + + AI Y++ L+I P+ A N
Sbjct: 716 YQQALLLEPNLVAVYNNLGYVLQQQSQWEEAISCYQKALEIQPNCVEAEIN 766
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS- 60
+NLGVA+ + K + AI Y+ A NP + +LG IY+ ++ L KA YQ L
Sbjct: 824 HNLGVAWQKQGKLEEAIAAYQNALDLNPQQGKTYFSLGQIYQVQNQLKKASSAYQKGLKL 883
Query: 61 IKPNFSQSL 69
I P++++++
Sbjct: 884 INPHYAKAI 892
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 39/71 (54%)
Query: 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128
LNNLG+V + + + + +A++ P +A+ +N+LG+ + ++ A Y++ L
Sbjct: 60 LNNLGIVLQEKQQFEESINCYYQALSIKPNWADVHNDLGIAFEKLDNLEEAFQHYQKALT 119
Query: 129 IDPDSRNAGQN 139
++P+ A N
Sbjct: 120 LNPNLAQASFN 130
>gi|294677605|ref|YP_003578220.1| hypothetical protein [Rhodobacter capsulatus SB 1003]
gi|3128311|gb|AAC16163.1| hypothetical protein [Rhodobacter capsulatus SB 1003]
gi|294476425|gb|ADE85813.1| TPR repeat domain protein [Rhodobacter capsulatus SB 1003]
Length = 617
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 227/541 (41%), Gaps = 57/541 (10%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
A A NLGV + +A + A ++P Q+ G+ + G D+A + +
Sbjct: 79 AAAWYNLGVALQRMGKHAEATAALETAQRLRPGLWQAGLGRGLAFEAAGAPDSALSVWRE 138
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ----NRLLAMNY- 146
+ + + L L D G + AI+ L IDPD + Q NR +
Sbjct: 139 LLPPAEARRQIHIQLARLLEDRGRLGEAIEEARAALLIDPDQPDVIQHLVHNRQRTTTWP 198
Query: 147 INE----GHDDKLFEAHRDWGKRFM------RLYSQYTSWDNTKDPERPLV--------- 187
+ E G ++L H R SW K P P +
Sbjct: 199 VTEVAVPGISEELAARHAGPLAALALVDDPARQAEICASWIGRKLPAAPQLLAPAGGYAH 258
Query: 188 ----IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
IGY+S D+ H++SY I L HD +++ Y A + D +R R V+
Sbjct: 259 DRVRIGYLSSDFCRHAMSYLIAELLERHDRTRFEIWGYDAT-RDDGSDVRAR--VLAALD 315
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
I + ++ AA +R D+IDIL++L G T + ++ +PAP+QVT++GY L
Sbjct: 316 HHVPIQDMTDEAAAARIRADEIDILIDLNGLTKGARPAILRAKPAPMQVTYLGYIGPVPL 375
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNG------- 356
P +DY + D++ PP + + +R+ C+ G + PA+T
Sbjct: 376 PELDYLLCDAVTVPPGAEADYSPRPLRIAGCYQAND-----GVMPQLPAVTRAEEGLPED 430
Query: 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLE 415
+ F ++ K+T V W RI+ VP S L ++ P ++ R+ + GL
Sbjct: 431 AVVFTCVSHHYKLTEAVWGAWCRIVARVPGSVLWIIDDNPESRAALTARWGAA----GLA 486
Query: 416 SLRVDLLPLILLNHDHMQAY----SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
R LI Y +L D+ LDT PY T ++L MG+P +T G
Sbjct: 487 PER-----LIFAARTDPARYRARLALADLFLDTTPYNAGTIASDALRMGLPLITTRGRAF 541
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A +G SLLT +GL IA++ Y LA+ + +D L L+ L + + D ++
Sbjct: 542 AARMGASLLTAIGLPDCIAEDLAGYEDLAVAIGTDPARLGALKAHLATGAWERTLGDAED 601
Query: 532 F 532
F
Sbjct: 602 F 602
>gi|424795604|ref|ZP_18221433.1| hypothetical protein XTG29_03097 [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422795393|gb|EKU24099.1| hypothetical protein XTG29_03097 [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 523
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 170/367 (46%), Gaps = 16/367 (4%)
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPL-VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
PL IG++S + H A + + +V ++ A+ + D I R +
Sbjct: 159 PLQIGFLSNGFGAHPTGLLTVALFERLRAHADLQVQLF-ALNRDDGSAIGARLRAAAHA- 216
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
W D+ G + +A +R+ ID+L +L G ++A +PAP+Q+ W+ YP T+G
Sbjct: 217 -WHDVAGQPHRAIAQGIRDAGIDLLFDLRGWGGGGAPEVLALRPAPLQINWLAYPGTSGA 275
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFI 358
P IDY I D+ A P + E ++RL F PS ++ V P+ L
Sbjct: 276 PWIDYVIGDAFALPDALAAHYSERVLRLQRAF---QPSDDSRRVGMPPSRRDCGLPEHGT 332
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
F FNN K+TP+ + +L VP+S L + P D+ R + ++ R
Sbjct: 333 VFCCFNNSYKLTPRSMTRMLAVLRQVPDSVLWLLSGPGQADT---RLRDAARRADVDPAR 389
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ +P L + D++ Y D+ LDT PY TT ++L+ G P + G+ A V S
Sbjct: 390 LRFMP-KLAHADYLARYRHADLFLDTHPYNAHTTASDALWAGCPLLICPGTTFAARVAGS 448
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
L +G+ + ++D ++ A+QL D AL LR +L+ + + + D Q FA +
Sbjct: 449 LNHHLGMDAMNVADDDAFIAKAVQLGRDPVALHALRDTLQQRRASAGLFDMQGFAADFAA 508
Query: 539 TYRNMWH 545
R + H
Sbjct: 509 LLRGLAH 515
>gi|418300833|ref|ZP_12912644.1| hypothetical protein ATCR1_24890 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355532841|gb|EHH02194.1| hypothetical protein ATCR1_24890 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 653
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 145/581 (24%), Positives = 242/581 (41%), Gaps = 56/581 (9%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+N VA ++ A+ + NP A NLG + +D + +AVE + +
Sbjct: 41 FNYAVALSQLGDRAGAVQAFRACLKANPQFAPGHINLGRVLEDSGLIGQAVEQWSHYAEM 100
Query: 62 KPNFS--------QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
+ +L N G V GK++ A + +A P EA + L +
Sbjct: 101 TKHLDAEAIGHRHMALQNTGRVLEGAGKLEDAETALLQAFELRPELPEAGQHWVSLRQ-- 158
Query: 114 GSISLAIDAYEQCL--KIDPDSRNAGQNRLLAMNYINEG--HDDKLFEAHRDWGKRFMRL 169
QC + P + + L AM+ + DD +F+ + + R+ +
Sbjct: 159 ----------RQCKWPVLAPSNHVPPRKMLDAMSSLTLSCYADDPMFQLAKAY--RYSKT 206
Query: 170 YSQYTSWDNTKDPERP----------LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVV 219
T D ++ P R L +GY+S D H+V + + L HD + +V
Sbjct: 207 VVG-TRPDLSRFPRRSPKQKSGTGERLRVGYLSSDLRDHAVGFALCEVLELHDKNSLEVF 265
Query: 220 VY--SAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTAN 277
Y V D+ R + V WRDI+G+D+ A+ + D IDIL+++ G+T +
Sbjct: 266 AYYCGNVRNTDSTQERIKAAVH----CWRDIHGLDDAAAASQIISDDIDILIDVNGYTKD 321
Query: 278 NKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC 337
+ + A +PAPV V++ GYP + G P Y I+D PPE + E+++R+ C
Sbjct: 322 ARTKIFAYRPAPVIVSFCGYPGSMGSPFHQYLISDGYMIPPENDIYYSEKVLRI----AC 377
Query: 338 YTPSPEAGPVCPTPA-----LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK 392
P + P+ L + SFN + KIT W IL P S L +
Sbjct: 378 DQPLDRKRLIAARPSRAEVGLPEDAFVYASFNGMQKITESCFARWMTILSETPGSLLWLL 437
Query: 393 CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452
+ V E+ G+ R+ P + N H+ + D+ LDTFPY +T
Sbjct: 438 AGD---EDVNEHLQGIAEKSGIAPERLVFAPKV-PNPQHIARIGVADLFLDTFPYGAHST 493
Query: 453 TCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALAN 512
+++ G+P +TM G A S++T G+ +I + ++YV A+ D +L
Sbjct: 494 AADAITSGLPVLTMPGKTFAARFCGSIVTAAGVPEMICSSPEDYVARAIGFERDRKSLLE 553
Query: 513 LRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+R S+ S + D A LE + M +G+ P
Sbjct: 554 VRESIARQRDTSVLRDIPALAQRLEELFWQMQGECERGETP 594
>gi|222080835|ref|YP_002540198.1| glycosyltransferase domain-containing protein [Agrobacterium
radiobacter K84]
gi|221725514|gb|ACM28603.1| glycosyltransferase TPR domain protein [Agrobacterium radiobacter
K84]
Length = 704
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 142/565 (25%), Positives = 239/565 (42%), Gaps = 61/565 (10%)
Query: 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA-------AEMI 89
N V + ++ ++ + L + P F + NLG G A E+
Sbjct: 84 NYSVTLRQLGDVAGSIHALRACLKLDPRFGPAHINLGRALEDSGIATQAILQWRSFVELT 143
Query: 90 EKAIAANPTYAE-AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN--------- 139
+ A + A ++G + +AG + A Q +++ PD AGQ+
Sbjct: 144 ADSTADRLAHRLLALQHIGRVMENAGLLEDAETTLWQAMELRPDKTEAGQHWSALRQRQC 203
Query: 140 ---RLLAMNYINEGH--------------DDKLFEAHRDW-------GKRFMRLYSQYTS 175
L++ ++++ H DD LF+ + + G+ +++ T
Sbjct: 204 KWPTLVSSDHVSIRHLLDAMSPLTLACFSDDPLFQLAKAYRYNKSFVGRPDTSGFTRKTP 263
Query: 176 WDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY--SAVVKADAKTIR 233
T +R L +GYVS D H+V + + L HD ++ ++ Y V+ DA R
Sbjct: 264 KQKTGTDQR-LRVGYVSSDLRDHAVGFALREVLELHDKRSVEIYAYYCGDPVQGDATQAR 322
Query: 234 FREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
+ V WRDI +++ A + +D IDILV++ G+T + + + A +PAPV V
Sbjct: 323 MKAVV----DCWRDIGVLNDADAARQIADDDIDILVDVNGYTKHARTKIFAYRPAPVVVN 378
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA- 352
+ GYP T G P Y I D PPE + E+++R+ C P + P+
Sbjct: 379 FCGYPGTMGSPFHHYIIADEHIIPPENEIYFSEKVLRIA----CNQPIDRKRVIAERPSR 434
Query: 353 ----LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
L + FN + KIT + W +IL S L + D V R L
Sbjct: 435 AEAGLPEDVFVYACFNGMQKITQETFAHWMKILAGTTGSVLWLLTG---GDDVDKRLLQL 491
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
E G+ R+ P N H+ ++ D+ LDTFPY +T ++L MG+P +T G
Sbjct: 492 AENAGVAPERLIFAPKA-PNAKHLARIAVADLFLDTFPYGAHSTAGDALTMGLPVLTFPG 550
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
A S++ G+ LI N ++Y++ A+ A++ +L +R SL+ S + D
Sbjct: 551 KSFAARFCHSIVAAAGVPELICSNPEDYIERAIGFANNPRSLREIRESLQAKRETSALRD 610
Query: 529 GQNFALGLESTYRNMWHRYCKGDVP 553
A LE + M +G+ P
Sbjct: 611 IPALARRLEELFWQMQAECERGETP 635
>gi|218189598|gb|EEC72025.1| hypothetical protein OsI_04909 [Oryza sativa Indica Group]
Length = 890
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 191/469 (40%), Gaps = 100/469 (21%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG AY E + D+AI+ Y A H N EA NNLG KD ++A+ CYQ L+++
Sbjct: 298 NLGNAYHEQGQLDLAILSYRQAIHCNSSYVEAYNNLGNALKDAGRNEEAISCYQTCLALQ 357
Query: 63 PNFSQSLNNLG----------------------------------VVYTVQGKMDAAAEM 88
P+ Q+L NLG ++Y QG + A
Sbjct: 358 PSHPQALTNLGNVYMERNMMDIAASLYMATLTVTTGLSAPYNNLAMIYKQQGNCNHAITC 417
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAID--------------------------- 121
+ + +P A+ N G +++AG I+ AI
Sbjct: 418 FNEVLRIDPMAADCLVNRGNTFKEAGRITEAIQDYFHAVTIRPTMAEAHANLAAAYKDTG 477
Query: 122 -------AYEQCLKIDPDSRNAGQNRLLAMNY-----INEGH------DDKL-FEAHRDW 162
+Y+Q L++ D A N L + + H D L E R +
Sbjct: 478 LLEASIISYKQALQLRQDFPEATCNLLHTLQMSSLPSVQPFHAIAYPIDSTLALEISRTY 537
Query: 163 GKRFMRLYSQYTSWDNTKDPERP---------LVIGYVSPDYFTHSVSYFIEAPLVYHDY 213
+ + S++ T P L IGYVS D+ H +S+ + + H+
Sbjct: 538 AAHYSLVASRFGLPTFTHSYPVPISNDGRTSRLRIGYVSSDFGNHPLSHLMGSIFGMHNQ 597
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
+V Y A+ D +R+++ + + D+ + +A ++ EDKI IL+ L G
Sbjct: 598 DTIEVFCY-ALSHDDGP--EWRQRIRSEAEHFIDVSSMSSDMIAKVINEDKIQILINLNG 654
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
+T + + A QPAP+QV+++G+P TTG IDY +TD P + + E+L+ LP
Sbjct: 655 YTKGARNEIFALQPAPIQVSYMGFPGTTGADYIDYLVTDEFVSPLKFSHIYSEKLVHLPH 714
Query: 334 CFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNLAKITPKVL 374
C+ + GPVCP G F FN L K+ P +
Sbjct: 715 CYFVNDYKQKNRDVLGPVCPHKRADYGLPEDKFIFACFNQLYKMDPDIF 763
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G Y ++ +FDM I E A P+C E N++ ++++ ++D A++ Y A+ ++P
Sbjct: 93 GAVYYQLREFDMCIAKNEEAVAIQPNCPECFNSIANAWREKGDVDNAIQFYVHAVQLRPT 152
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
F+ + NL YT +G + AAE +A+A NP A+AY NLG + + G A Y
Sbjct: 153 FADAWTNLANAYTRKGNLSQAAECCHQALALNPHLADAYCNLGDVLKAQGLYREAYSHYL 212
Query: 125 QCLKIDPDSRNAGQN 139
L I P NA N
Sbjct: 213 DALNIKPTFANAWNN 227
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%)
Query: 7 AYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS 66
A+ E D AI FY A P A+A NL Y + NL +A EC AL++ P+ +
Sbjct: 129 AWREKGDVDNAIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQAAECCHQALALNPHLA 188
Query: 67 QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQC 126
+ NLG V QG A A+ PT+A A+NN+ L G + A Y++
Sbjct: 189 DAYCNLGDVLKAQGLYREAYSHYLDALNIKPTFANAWNNIAGLLMQWGDFNKAAVYYKEA 248
Query: 127 LKIDPDSRNAGQN 139
+K +P +A N
Sbjct: 249 IKCNPAFYDAHLN 261
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY A A NPH A+A NLG + K + +A Y AL+IK
Sbjct: 159 NLANAYTRKGNLSQAAECCHQALALNPHLADAYCNLGDVLKAQGLYREAYSHYLDALNIK 218
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + NN+ + G + AA ++AI NP + +A+ NLG LY+ G AI
Sbjct: 219 PTFANAWNNIAGLLMQWGDFNKAAVYYKEAIKCNPAFYDAHLNLGNLYKVTGMRQDAIVC 278
Query: 123 YEQCLKIDPDS 133
++ + P++
Sbjct: 279 FQNAARAKPEN 289
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 67/172 (38%), Gaps = 41/172 (23%)
Query: 9 GEMLK----FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G++LK + A Y A + P A A NN+ + + +KA Y+ A+ P
Sbjct: 195 GDVLKAQGLYREAYSHYLDALNIKPTFANAWNNIAGLLMQWGDFNKAAVYYKEAIKCNPA 254
Query: 65 FSQSLNNLGVVYTV-------------------------------------QGKMDAAAE 87
F + NLG +Y V QG++D A
Sbjct: 255 FYDAHLNLGNLYKVTGMRQDAIVCFQNAARAKPENAVAYVFSGNLGNAYHEQGQLDLAIL 314
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+AI N +Y EAYNNLG +DAG AI Y+ CL + P A N
Sbjct: 315 SYRQAIHCNSSYVEAYNNLGNALKDAGRNEEAISCYQTCLALQPSHPQALTN 366
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 25 FHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
+ NP E LG +Y D + + A++I+PN + N++ + +G +D
Sbjct: 79 YRANPRLLENLLLLGAVYYQLREFDMCIAKNEEAVAIQPNCPECFNSIANAWREKGDVDN 138
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A + A+ PT+A+A+ NL Y G++S A + Q L ++P
Sbjct: 139 AIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQAAECCHQALALNP 185
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-KHLIAKNEDEYVQLALQLASDV 507
G TT + L+ G+P +T+ A V SL G+ + ++ + +EY + A+ LA +
Sbjct: 771 GHTTGTDILWAGLPMITLPLEKMATRVAGSLCLATGIGEEMVVNSLEEYEERAVSLAENP 830
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L L L+ + P+ D + LE Y +MW+ +C G P
Sbjct: 831 LKLEALTNKLKAVRMTCPLFDTARWVKNLERAYLHMWNLHCSGRHP 876
>gi|428210827|ref|YP_007083971.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Oscillatoria acuminata PCC 6304]
gi|427999208|gb|AFY80051.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Oscillatoria acuminata PCC 6304]
Length = 746
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 180/369 (48%), Gaps = 8/369 (2%)
Query: 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
RPL IGY+S HSV + + +H+ + +++ Y V + T + +
Sbjct: 380 RPLKIGYISNCLRNHSVGWLARSLFQHHNPELFEIHAY--FVAGELHTAQPIHQWYLSQV 437
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
G+D ++A + +D IDIL++L T + +MA +PAPVQVTW+G+ + +GL
Sbjct: 438 PHPHQVGVDNVEIADRIHQDDIDILIDLDSLTLDMTCEVMALKPAPVQVTWLGW-DASGL 496
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFG 361
P IDY I D P E + + E++ RLP+ ++ P L + +
Sbjct: 497 PAIDYFIADPYVLPEEAQHYYPEKIWRLPQTYIAVDGFEVGVPNLRRDRLNIPQDAVVYF 556
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CDSVRHRFLSTLEQLGLESLRVD 420
S K P ++ +I+ AVPNS ++K F +S++ F+ E+ G+E R+
Sbjct: 557 SGQTGYKRHPDTARLQMQIIKAVPNSYFLIKG--FAEQESIKRFFIQLAEEEGVEGDRLR 614
Query: 421 LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL 480
LP H + D+ LDT+PY G TTT E+L+MG+P VT G A +++
Sbjct: 615 FLPPAPSEAIHRANLGIADVVLDTYPYNGATTTLETLWMGIPVVTKVGKQFAACNSYTMM 674
Query: 481 TKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
VG+ I+ + EYV+ ++L D ++ LR SP+ +G+ F +E+ Y
Sbjct: 675 MNVGVSEGISWTDQEYVEWGIRLGKDAKLRQHISGRLRASRQTSPLWNGKQFTREMENAY 734
Query: 541 RNMWHRYCK 549
M +Y +
Sbjct: 735 VQMRLKYLE 743
>gi|398955966|ref|ZP_10676713.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Pseudomonas sp. GM33]
gi|398150432|gb|EJM39025.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Pseudomonas sp. GM33]
Length = 611
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 141/567 (24%), Positives = 241/567 (42%), Gaps = 66/567 (11%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS- 60
+NLG ++ + + A Y A NP A+A NLG + + + +A+ +Q L
Sbjct: 69 FNLGATLSQLGQIEAAEAAYRAAIAQNPEFAQAWFNLGTLLERQHKPQEALAIWQSMLDD 128
Query: 61 --IKPNFSQSL-----NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD- 112
+ S+ L NNLG +Y ++ + ++ ++ A+P + + L +
Sbjct: 129 RMVDATQSRELYLMTCNNLGRLYEETRQLQKSEAILRTSLDADPNQPKVIQHWVHLRQKQ 188
Query: 113 ---------AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL--FEAHRD 161
AG + L + S + G A++++ E + ++ + +
Sbjct: 189 CVWPVYEPPAGLTRGDLLKASSPLALLAGSDDPGLQLAAAVHFVKERVNVRVPALASAQG 248
Query: 162 WGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY 221
+G + +R IG++S D+ H+VS D Q ++V +
Sbjct: 249 YGHQKLR-------------------IGFLSSDFCLHAVSLLTVELFELIDRQRFEVYGF 289
Query: 222 SAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLG 281
+ D +R E+V + + I +D+ A +R +IDIL++L G T+ +
Sbjct: 290 -CWSREDGSALR--ERVRQAMDHFVRIDAMDDATAAQCIRNHEIDILIDLHGLTSGARPD 346
Query: 282 MMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPS 341
+ A +PA VQ+T++G+P +TGLP IDY I D P K + E + L + + C S
Sbjct: 347 IPAYRPAAVQMTYLGFPGSTGLPGIDYVIADRYLIPDSEKAYYSETPLYLAQIYQC---S 403
Query: 342 PEAGPVCPTP-----ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKC--- 393
PV P L F SFNN K +V W RIL P+S L +
Sbjct: 404 DRQRPVAALPTRAECGLPQERFVFCSFNNNYKFNEEVFDCWMRILQRAPDSVLWLLADNQ 463
Query: 394 ---KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT 450
+ C + H G++ R+ P + ++ YS+ D+ LD +P+
Sbjct: 464 WAQENLCARAQAH---------GVDPARLLFAPRV-APEQYLARYSVADLFLDAYPFNAG 513
Query: 451 TTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510
TT ++L+MG+P +T +G A + SLLT + L LI EY + A++LA+ L
Sbjct: 514 TTANDALWMGLPVLTRSGRTFASRMAGSLLTALDLPELITTTLAEYEERAVELATRADLL 573
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLE 537
LR L S + D F E
Sbjct: 574 PGLRERLHRGREHSALFDTPRFVRDFE 600
>gi|428312764|ref|YP_007123741.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Microcoleus sp. PCC 7113]
gi|428254376|gb|AFZ20335.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Microcoleus sp. PCC 7113]
Length = 789
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 138/579 (23%), Positives = 244/579 (42%), Gaps = 91/579 (15%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
YNLG + + D A++ Y+ A NP+ +A LG ++A+ CYQ AL+
Sbjct: 177 FYNLGNLLKQQNQLDAAMIQYQWALALNPNYIDAHLQLGTSLHSLGKYEEAIICYQQALT 236
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++PN + LG + + A ++A+ NP + E Y L + + AI
Sbjct: 237 LEPNVLDTYLKLGWALMHLSRFEKATHCFQQALILNPEHPEVYQKLALALASQNQLEEAI 296
Query: 121 DAYEQCLKIDPDSRNA---------------------------GQNRLLAMNYIN----- 148
++++ L ++ + A G N L+ + N
Sbjct: 297 TSFQKALHLNSNFVEAYWQSHLLLPILYDTQEQIQHWRQRFCRGLNHLIQQSDFNSNEGI 356
Query: 149 ------------------EGHDDKLFEAHRDWGKRFMRLYSQ-YTSWDN-----TKDPER 184
+G +D+ + R +G R+ + Y W +R
Sbjct: 357 RQILAGLTASATTFLLSYQGFNDRGIQ--RKYGTLVHRVMATIYPQWTKPMSMPQLSHQR 414
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
+ +GY+S + TH+V+ L D + ++ Y KAD T K I
Sbjct: 415 KIRVGYLSAYFRTHTVASLTLGWLKNCDKEKLEIYSYYIGSKADLTTAEIYSNSDKYYHI 474
Query: 245 WRDIYGIDEKKVAAMVREDKIDILV-------ELTGHTANNKLGMMACQPAPVQVTWIGY 297
+ D+ I E+ +A DK+ ILV LT + A +L + C +TW G+
Sbjct: 475 YGDLNSICEQVIA-----DKLHILVFTDIGMDSLTTYIAGLRLAPIQC------MTW-GH 522
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA---LT 354
P T+GLPTIDY ++ L +P + + E+L+RLP +CY P + + + L
Sbjct: 523 PVTSGLPTIDYFLSSDLMEPQNAQSHYWEKLVRLPNIGICYQ-KPVVSELTKSRSELNLR 581
Query: 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGL 414
I + +L K P+ ++ +I VP ++ P V +F++ L +
Sbjct: 582 EDTIIYLCCQSLFKYLPQFDTIFPKIAQRVPQAQFAFVSHP--VPVVTAQFITRLSR-AF 638
Query: 415 ESLRVD------LLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
+L+++ +LP L D+ + ++ LDTF ++G TT E++ G+P VT G
Sbjct: 639 ANLKLNYKDYCVILPR-LERVDYFNLNLVSNVFLDTFSWSGGNTTLEAIACGLPIVTCPG 697
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDV 507
+L ++G+ IA++E EYV++A++L D
Sbjct: 698 EFMRSRHSYGILKRMGITETIAQDEIEYVEIAVRLGIDT 736
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG ++ K + AI +Y+ P AEA LG + + L +A+ YQ A+ ++P
Sbjct: 44 LGRMAHQVGKLEEAIAYYQKLIALLPDYAEAYYRLGSALQSKGQLAEAIAFYQHAIKLQP 103
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+++++ NLG + QG + AA E ++AIA NP AEA+ NL + + G I AI Y
Sbjct: 104 DYTEAHYNLGYAFHQQGNLPAAIEHYQQAIALNPNQAEAHANLAHILQHQGQIEAAITHY 163
Query: 124 EQCLKIDPD 132
+Q + I PD
Sbjct: 164 QQAIAIKPD 172
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
YNLG A+ + AI Y+ A NP+ AEA NL I + + ++ A+ YQ A++I
Sbjct: 110 YNLGYAFHQQGNLPAAIEHYQQAIALNPNQAEAHANLAHILQHQGQIEAAITHYQQAIAI 169
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
KP+ + NLG + Q ++DAA + A+A NP Y +A+ LG G AI
Sbjct: 170 KPDVPEIFYNLGNLLKQQNQLDAAMIQYQWALALNPNYIDAHLQLGTSLHSLGKYEEAII 229
Query: 122 AYEQCLKIDPD 132
Y+Q L ++P+
Sbjct: 230 CYQQALTLEPN 240
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y LG A + AI FY+ A P EA NLG + + NL A+E YQ A+++
Sbjct: 76 YRLGSALQSKGQLAEAIAFYQHAIKLQPDYTEAHYNLGYAFHQQGNLPAAIEHYQQAIAL 135
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PN +++ NL + QG+++AA ++AIA P E + NLG L + + A+
Sbjct: 136 NPNQAEAHANLAHILQHQGQIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAAMI 195
Query: 122 AYEQCLKIDPDSRNA 136
Y+ L ++P+ +A
Sbjct: 196 QYQWALALNPNYIDA 210
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
P+ EA + LG + L++A+ YQ +++ P+++++ LG +G++ A
Sbjct: 34 QPNSTEALDLLGRMAHQVGKLEEAIAYYQKLIALLPDYAEAYYRLGSALQSKGQLAEAIA 93
Query: 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
+ AI P Y EA+ NLG + G++ AI+ Y+Q + ++P+ A N
Sbjct: 94 FYQHAIKLQPDYTEAHYNLGYAFHQQGNLPAAIEHYQQAIALNPNQAEAHAN 145
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + AI Y+ A P E NLG + K ++ LD A+ YQ AL++ PN+ + L
Sbjct: 155 QIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAAMIQYQWALALNPNYIDAHLQL 214
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G GK + A ++A+ P + Y LG A ++Q L ++P+
Sbjct: 215 GTSLHSLGKYEEAIICYQQALTLEPNVLDTYLKLGWALMHLSRFEKATHCFQQALILNPE 274
Query: 133 SRNAGQNRLLAMNYINE 149
Q LA+ N+
Sbjct: 275 HPEVYQKLALALASQNQ 291
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106
NL A Q L +PN +++L+ LG + GK++ A +K IA P YAEAY L
Sbjct: 19 NLSHAEWICQQILQQQPNSTEALDLLGRMAHQVGKLEEAIAYYQKLIALLPDYAEAYYRL 78
Query: 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
G + G ++ AI Y+ +K+ PD A N
Sbjct: 79 GSALQSKGQLAEAIAFYQHAIKLQPDYTEAHYN 111
>gi|422303914|ref|ZP_16391264.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC (fragment)
[Microcystis aeruginosa PCC 9806]
gi|389791071|emb|CCI13110.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC (fragment)
[Microcystis aeruginosa PCC 9806]
Length = 288
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 7/289 (2%)
Query: 273 GHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLP 332
G+ + ++A +PAP+QV ++ YP T G IDY I D++ PPE+ E+L+ LP
Sbjct: 2 GYIDKARTQILALKPAPIQVNYLVYPGTMGADFIDYIIGDAIVTPPESADNFSEKLVILP 61
Query: 333 ECFLC--YTPSPEAGPVCPTP-ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL 389
+ + Y + PV + L F FN+ KI P++ VW IL VP S L
Sbjct: 62 DSYQANDYQQIISSKPVTRSHYGLPESGFVFCCFNHTYKIEPQIFTVWMEILDNVPGSVL 121
Query: 390 VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAG 449
+ + ++ R + G+E R+ + + +H+ + L D+ LDT Y
Sbjct: 122 WLFSRVAEAEANLRR---EAQARGIEGDRL-IFAHLQPKPEHLARHQLADLFLDTLYYNA 177
Query: 450 TTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTA 509
TT ++L+ G+P +T G+ VG SLLT +GL LI KN +EY LA+ LA
Sbjct: 178 HTTGSDALWAGLPIITCPGTTFPSRVGASLLTAIGLPELITKNLEEYKNLAINLAKSPDK 237
Query: 510 LANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLKRM 558
L ++ L P+ D F LE YR MW Y G P + R+
Sbjct: 238 LHEIKQKLAQNRLTYPLFDTLRFTRNLEKAYRTMWDIYAAGKSPEMIRI 286
>gi|22298553|ref|NP_681800.1| hypothetical protein tll1010 [Thermosynechococcus elongatus BP-1]
gi|22294733|dbj|BAC08562.1| tll1010 [Thermosynechococcus elongatus BP-1]
Length = 1126
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 25/383 (6%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
+G++ + H + + + + ++D Q ++ Y+ A +K + + +R
Sbjct: 755 VGFIGSCFHEHPAGHQVRSFIRFYDRQQFEFYAYNPWFDA-SKQDKLSDWFQASFDHFRH 813
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
G + +A + EDKID+L++L T++ ++ +PAP+Q TWIG+ + GLP +D
Sbjct: 814 C-GKNATDIAEQIYEDKIDLLIDLDSCTSDITYQVLTLKPAPLQATWIGF-DAIGLPAVD 871
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLC---YTPSPEAGPVCPTPALTNGFITFGSFN 364
Y I D P + + E L RLPEC+L Y + + G + L+ + F
Sbjct: 872 YFIVDPYILPEGAQAWYTETLWRLPECYLSLDGYEVANKTG-IRDQLGLSAEAVVFLCAQ 930
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL-----GLESLRV 419
+KI P++L++ I+ AVPN+ LVVK HR E+ +E +
Sbjct: 931 RTSKIQPEILKLQFAIVEAVPNAVLVVK---------YHRGSPIFEEWCRSVAEVEGFDL 981
Query: 420 DLLPLILLNHDHMQAYSL--MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
D L + N + +L +D+ LDT+PYAG + E+L++ VP VT G
Sbjct: 982 DKLYFLTPNLPEIHRANLYDVDVVLDTYPYAGGAMSLEALWLEVPIVTKVGQQFVARHTY 1041
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
+ L VG++ IA N++EYV ++ ++ + LR +P+ + F+ +E
Sbjct: 1042 TFLKNVGVEEGIAFNDEEYVHWGIRFGTEPELRRQVSWKLRQAKRHAPLWNPHRFSRQME 1101
Query: 538 STYRNMWHRYCKGD--VPSLKRM 558
R M +RY G+ VP+ R+
Sbjct: 1102 QALRAMVNRYRTGEWVVPAGHRV 1124
>gi|332712009|ref|ZP_08431939.1| hypothetical protein LYNGBM3L_68530 [Moorea producens 3L]
gi|332349337|gb|EGJ28947.1| hypothetical protein LYNGBM3L_68530 [Moorea producens 3L]
Length = 344
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 145/299 (48%), Gaps = 4/299 (1%)
Query: 250 GIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYR 309
GI +VA + +D++DILV+L T + +MA + APVQVTW+G+ + +GLP IDY
Sbjct: 48 GIHVLEVAEQIYQDQLDILVDLDSITLDITCAVMALKLAPVQVTWLGW-DASGLPAIDYV 106
Query: 310 ITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFGSFNNLA 367
I D P + + E++ LP+ ++ P L N + S
Sbjct: 107 IADPYVLPDSAQAYYSEKIWCLPQTYIAVDGFEVGVPSLRRDHLDIPNDATIYLSSQKGY 166
Query: 368 KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427
K P ++ +I+ AVPNS ++K K DS+ F E+ G++ R+ LP +
Sbjct: 167 KRNPDTTRLQMKIIKAVPNSYFLIKGKS-DQDSITRFFNQIAEEEGVDCDRLRFLPEVPT 225
Query: 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH 487
H + D+ LDT+PY G TTT E+L+MG+P VT G +++ G+
Sbjct: 226 EAVHRANLGIADVVLDTYPYNGATTTLETLWMGIPLVTRVGEQFVARNSYTMMMNAGITE 285
Query: 488 LIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546
IA +D+Y++ ++L D + LR +P+ +G+ F +E Y M R
Sbjct: 286 GIAWTDDQYIEWGIRLGKDPALRQQISWKLRQSRQTAPLWNGKQFTREMEKAYEAMLGR 344
>gi|381159635|ref|ZP_09868867.1| hypothetical protein Thi970DRAFT_03390, partial [Thiorhodovibrio
sp. 970]
gi|380877699|gb|EIC19791.1| hypothetical protein Thi970DRAFT_03390, partial [Thiorhodovibrio
sp. 970]
Length = 236
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 128/229 (55%), Gaps = 6/229 (2%)
Query: 320 TKQKHVEELIRLPECFLCYTPSPEA-GPVCPTPALTNGFITFGSFNNLAKITPKVLQVWA 378
T+ + +E ++ LP CY P P A + P P + TFGSFNN AK+ V +WA
Sbjct: 1 TEDQFIEPILPLPAGRFCYQPVPWAPKDLSPPPVAHSARTTFGSFNNTAKLNDGVYDLWA 60
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
+IL VP+SRL++K + F ++R R G+ + R++L + D ++ Y+ +
Sbjct: 61 QILAVVPDSRLLLKWRTFNDAALRQRVTQAFVTRGIAAERLELRG-PSFHADLLKEYAEL 119
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
DI+LD FP+ G TTCE+L+MGVP +T S ++L ++GL+ L A + D YV+
Sbjct: 120 DIALDPFPFTGGLTTCEALWMGVPVITWPQSRVVSRQTHAVLHQIGLQALSASDADSYVR 179
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST----YRNM 543
LA +LA+D L +LR LR M S + D F GLE + YR++
Sbjct: 180 LAGELAADPVRLRDLRQGLRAQMQASRLMDTAGFTRGLEDSLIKLYRDI 228
>gi|218248025|ref|YP_002373396.1| family 2 glycosyl transferase [Cyanothece sp. PCC 8801]
gi|218168503|gb|ACK67240.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8801]
Length = 1252
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/533 (24%), Positives = 227/533 (42%), Gaps = 71/533 (13%)
Query: 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95
NNLG++ +++ ++++ CY ALSIKPN++ N+LG+ + ++ A + +KA+
Sbjct: 61 NNLGIVLQEKQQFEESINCYYQALSIKPNWADVHNDLGIAFEKLDNLEEAFQHYQKALTL 120
Query: 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA-MNYINEGHDDK 154
NP A+A N+G + G A+ Y++ L+I+PD A L+ + YI +DD
Sbjct: 121 NPNLAQASFNIGNILYQRGYFEEALTYYQKALEINPDFNLAHFALLMKQIPYIYSSYDDL 180
Query: 155 LFEA-------------------------------------------HRDWGKRFMRLY- 170
F RD + + L
Sbjct: 181 QFRRTNYQNYLQHLVKIVQKASLEEKNNLAKAVGSSQPFFLPYQGLNDRDLQQIYGNLIC 240
Query: 171 ----SQYTSWD-----NTKDPERPLVIGYVSPDYFTHSVSYF-IEAPLVYHDYQNYKVVV 220
S Y W +T + R + IG+VS + HSV ++ + D +++
Sbjct: 241 HLMASLYPQWSQPLALSTLEVNRKIRIGFVSGFFHNHSVWKIPLKGWVRNLDRSRFELFA 300
Query: 221 YSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILV--ELTGHTANN 278
Y K D +T K R I ++ + EDK+ L+ E+ T
Sbjct: 301 YYTSYKEDGETFIASRSFDKFIQGHRTI-----EQWCQTIVEDKLHALIFPEIGMDTVTT 355
Query: 279 KLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY 338
++ + AP+Q+T G+PNT+G+PTIDY ++ L + + + E+L+RLP + Y
Sbjct: 356 QIACLRL--APIQMTSWGHPNTSGMPTIDYYLSSDLMESDTAQDYYTEKLVRLPNLSIYY 413
Query: 339 TPSPEAGPVCPTP---ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV---- 391
P P + L + F +L K P+ V+ +I +PNS+ V
Sbjct: 414 NPLEYVQPKAISKEDIGLKVDDVMFWCCQSLYKYLPQHDDVFPKIAQQLPNSKFVFIEGQ 473
Query: 392 KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTT 451
K + R + EQ GL + + ++ DI+LD+ ++G
Sbjct: 474 KNIKNITEIFVQRLRKSFEQFGLNYQDYCIFLPRMDVPTFAGTAAIADINLDSLGWSGCN 533
Query: 452 TTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLA 504
+T ES+ +P VT A +++L +G++ IA ++D Y+++A+ L
Sbjct: 534 STLESIAHNIPVVTFAADFMRGRHTMAILKMIGIEETIASSKDNYIEIAVHLG 586
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 25/154 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG Y E +F AI Y+ A P+ NNLG + + + ++A+ CYQ AL I+
Sbjct: 698 SLGNLYQEKKQFSQAINAYQQALFLEPNLVAVYNNLGYVLQQQSQWEEAISCYQKALEIQ 757
Query: 63 PN-------------------------FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
PN ++Q LG+ QG + A E ++ I P
Sbjct: 758 PNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQLGIKQEQQGNLATAIECYQQGIKLQP 817
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
AE Y+NLGV ++ G + AI AY+ L ++P
Sbjct: 818 ESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNP 851
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNL------------------------ 38
NLG + +++ AI Y+ A P+C EA NL
Sbjct: 732 NLGYVLQQQSQWEEAISCYQKALEIQPNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQ 791
Query: 39 -GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
G+ + + NL A+ECYQ + ++P ++ +NLGV + QGK++ A + A+ NP
Sbjct: 792 LGIKQEQQGNLATAIECYQQGIKLQPESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNP 851
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+ Y +LG +Y+ + A AY++ LK+
Sbjct: 852 QQGKTYFSLGQIYQVQNQLKKASSAYQKGLKL 883
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+Y LGV ++ +FD A + P A+A +LG +Y+++ +A+ YQ AL
Sbjct: 662 LYGLGVLAHQIGEFDYAEQLFNDLLKVQPKSAKAWMSLGNLYQEKKQFSQAINAYQQALF 721
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN--------------- 105
++PN NNLG V Q + + A +KA+ P EA N
Sbjct: 722 LEPNLVAVYNNLGYVLQQQSQWEEAISCYQKALEIQPNCVEAEINLANVLHSQNKLPPEQ 781
Query: 106 ----------LGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155
LG+ G+++ AI+ Y+Q +K+ P+S N L + + +G ++
Sbjct: 782 QIQYAQLNLQLGIKQEQQGNLATAIECYQQGIKLQPESAEIYHN--LGVAWQKQGKLEEA 839
Query: 156 FEAHRD 161
A+++
Sbjct: 840 IAAYQN 845
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
++L A E Y L+ + SL LGV+ G+ D A ++ + P A+A+ +
Sbjct: 639 NDLTGAKEAYNRILARETKHPDSLYGLGVLAHQIGEFDYAEQLFNDLLKVQPKSAKAWMS 698
Query: 106 LGVLYRDAGSISLAIDAYEQCLKIDPD 132
LG LY++ S AI+AY+Q L ++P+
Sbjct: 699 LGNLYQEKKQFSQAINAYQQALFLEPN 725
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS- 60
+NLGVA+ + K + AI Y+ A NP + +LG IY+ ++ L KA YQ L
Sbjct: 824 HNLGVAWQKQGKLEEAIAAYQNALDLNPQQGKTYFSLGQIYQVQNQLKKASSAYQKGLKL 883
Query: 61 IKPNFSQSL 69
I P++++++
Sbjct: 884 INPHYAKAI 892
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 39/71 (54%)
Query: 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128
LNNLG+V + + + + +A++ P +A+ +N+LG+ + ++ A Y++ L
Sbjct: 60 LNNLGIVLQEKQQFEESINCYYQALSIKPNWADVHNDLGIAFEKLDNLEEAFQHYQKALT 119
Query: 129 IDPDSRNAGQN 139
++P+ A N
Sbjct: 120 LNPNLAQASFN 130
>gi|434404762|ref|YP_007147647.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Cylindrospermum stagnale PCC 7417]
gi|428259017|gb|AFZ24967.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Cylindrospermum stagnale PCC 7417]
Length = 742
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 181/382 (47%), Gaps = 7/382 (1%)
Query: 166 FMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVV 225
F R + ++ T + L IGYVS HSV + +H+ +++ Y+ ++
Sbjct: 361 FQRYSQRNINYRQTSTYNKKLKIGYVSYVLKRHSVGWLARWLFQHHNRDKFEI--YTYLI 418
Query: 226 KADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMAC 285
+ +F E+ + GI +V+ + ED IDIL++L T + +M+
Sbjct: 419 NYNP-VDQFAEEWFVNKADKANKLGITVLEVSEKIYEDDIDILIDLDSITLDISCAVMSL 477
Query: 286 QPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG 345
+PAP+QVTW+G+ + +G+P IDY I D P + + E++ RLP+ ++
Sbjct: 478 KPAPIQVTWLGW-DASGIPAIDYFIADPYVLPDSAQNYYTEKIWRLPQTYIAVDGFEVGI 536
Query: 346 PVCPTPALT--NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRH 403
P L + + + S K P+ + RI+ VPNS ++K ++++
Sbjct: 537 PTLRRQDLDIPSDAVVYLSSQRSYKRHPETTKWQMRIIKEVPNSYFLIKGDA-DEEAIKQ 595
Query: 404 RFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPC 463
F E+ G++S R+ LP H ++ D+ LDTFPY G TTT E+L+MG+P
Sbjct: 596 FFYKIAEEEGVDSSRLRFLPQDPSEAVHRANLAIADVVLDTFPYNGATTTLETLWMGIPL 655
Query: 464 VTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSK 523
VT G +++ VG+ +A ++EYV+ ++L D + LR
Sbjct: 656 VTRVGEQFVSRNSYTMMMNVGVTEGLAWTDEEYVEWGVRLGKDAGLRQQIAGKLRQSRQT 715
Query: 524 SPVCDGQNFALGLESTYRNMWH 545
+P+ +G+ F +E Y MW
Sbjct: 716 APLWNGKQFTREMEKAYEQMWQ 737
>gi|425440157|ref|ZP_18820465.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719465|emb|CCH96700.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 508
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 183/377 (48%), Gaps = 26/377 (6%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
K ++ L IGY++ HSV + + +HD + ++ +Y+ + D T + FR+
Sbjct: 143 KKAQKKLTIGYLASTLKHHSVGWLSRWLIHHHDREKLQIAIYTINQEEDEITRQWFRDS- 201
Query: 239 MKKGGIWRDI-----YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
RDI Y + +VA +++D+IDILV+L T N +MA +PA QVT
Sbjct: 202 -------RDIIRHFPYAQNPLEVAQQIQQDQIDILVDLDSLTHNITNQIMALKPAAKQVT 254
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY------TPSPEAGPV 347
W+G+ + +GL TIDY I D P + ++ + E++ RLPE +L TP+ +
Sbjct: 255 WLGW-DASGLATIDYYIADPYVLPQQAEEYYREKIYRLPETYLAVDGFEIGTPNLRREDL 313
Query: 348 CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLS 407
P T F S + K P +++ +IL VPNS ++K + ++ F
Sbjct: 314 EIPPDATIYF----SVQSGMKRHPDTIKLQMKILAQVPNSYFLIKGVG-KTEKIQELFTE 368
Query: 408 TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
+ G+ R+ LP + + H + D+ LDT+PY G TTT E L+ G+P VT+
Sbjct: 369 IAIREGVNPQRLRFLPRDIDEYTHRANLQIADVVLDTYPYNGATTTLEVLWQGIPLVTLV 428
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G + + + G++ I NE EY+ ++L D + ++ L +P+
Sbjct: 429 GEQFSARNSYTFMINAGIEAGIGWNEAEYIDWGVKLGLDRSLRQDISHQLLGNRDTAPLW 488
Query: 528 DGQNFALGLESTYRNMW 544
G+ FA +E+ Y +W
Sbjct: 489 QGKKFAQNMENAYLKIW 505
>gi|86605706|ref|YP_474469.1| FkbM family methyltransferase [Synechococcus sp. JA-3-3Ab]
gi|86554248|gb|ABC99206.1| methyltransferase, FkbM family [Synechococcus sp. JA-3-3Ab]
Length = 1283
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 182/390 (46%), Gaps = 26/390 (6%)
Query: 169 LYSQY-----TSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL----------VYHDY 213
L+S+Y + R L +G++ + HSV + EA L Y+ Y
Sbjct: 424 LWSEYWKKNQQDYQTVNGESRKLRVGFLGSCFQRHSVGFLSEATLRNLSRSVLDICYYYY 483
Query: 214 QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTG 273
Q +K + D +FR + + + G+ +VAA RED+IDI+V +
Sbjct: 484 QGWKT---EEIASCDNMYRKFRSQESLYFRFFSE--GVSAPQVAAQAREDRIDIMVFMDS 538
Query: 274 HTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPE 333
T+++ + A + APVQ+ W+G + GLP DY D P + + EE+IRLP
Sbjct: 539 ITSHDANIVAALRAAPVQIGWLG-GDAVGLPEFDYFFADPYILPENAQADYHEEIIRLPS 597
Query: 334 -CFLCYTPSPEAGPVCPTPALTNG--FITFGSFNNLAKITPKVLQVWARILCAVPNSRLV 390
C + Y A V L G + F + N K T + + +IL A+PN L+
Sbjct: 598 YCAVDYLDVIAADEVNFKTKLRIGPTDVVFLTAANAYKRTDECISAHLQILKAIPNGILI 657
Query: 391 VKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT 450
VK +R R+ ++LG+ RV L +H +D+ LDTFPY G
Sbjct: 658 VKGLGEIATVIR-RYQEKSKELGVLD-RVRFLAKAGSVEEHRGQLGCVDLILDTFPYTGA 715
Query: 451 TTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510
T T E+LYMGVP +T+ G + + SLL +GL+ I + +E++Q +QL +D +
Sbjct: 716 THTMEALYMGVPVLTLVGRHYYGRMSYSLLKNIGLEECITWSVEEFIQRGIQLGNDPERI 775
Query: 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
++ ++D S + D + A +E+ +
Sbjct: 776 NRIKKQIKDSRRWSIIWDPREHARSMEAAF 805
>gi|393909951|gb|EFO25409.2| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
[Loa loa]
Length = 1094
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 172/378 (45%), Gaps = 48/378 (12%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E K + A Y A P A A +NL I + + L A+ Y+ A+ I
Sbjct: 373 NLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLQDAINHYKEAIRIA 432
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G G + A + +AI NP +A+A++NL +++D+G++ AI +
Sbjct: 433 PTFADAYSNMGNTLKEMGDVGGALQCYTRAIQINPGFADAHSNLASIHKDSGNVPEAIQS 492
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD-----DKLFEAHRDW--GKRFMRLYSQ--- 172
Y LK+ PD +A N + I + D KL D KR ++
Sbjct: 493 YSTALKLKPDFPDAFCNLAHCLQIICDWTDYDNRMKKLIAIVDDQLQKKRLPSVHPHHSM 552
Query: 173 ---------------------------------YTSWDNTKDPERPLVIGYVSPDYFTHS 199
Y ++ + +R L IGYVS D+ H
Sbjct: 553 LYPLTHAVRMAIAAKHAQLCIEKVQICHKAPYIYPDRNSVRKGQR-LRIGYVSSDFGNHP 611
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAA 258
S+ +++ H+++N +V Y A+ D FR+K+M + + D+ I K A
Sbjct: 612 TSHLMQSIPGMHNHENVEVFCY-ALSPNDGTN--FRQKLMNESEHFIDLSQITCNGKAAD 668
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP 318
+ +D I IL+ + G+T + + A +PAP+QV W+GYP T+G P +DY ITDS+ P
Sbjct: 669 RIHDDGIHILINMNGYTKGARNEIFALRPAPIQVMWLGYPGTSGAPFMDYIITDSVTSPL 728
Query: 319 ETKQKHVEELIRLPECFL 336
E + E+L +P F
Sbjct: 729 ELAHAYSEKLAYMPHTFF 746
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
L + I F +FN L KI P L +W IL +VPNS L + P+ + RF + +
Sbjct: 880 GLPDDAIVFCNFNQLYKIDPPTLSMWCDILKSVPNSILWLLRFPYHGEPNVMRFCA---E 936
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
+++ R+ + + +H++ L D+ LDT G TT + L+ G P +TM
Sbjct: 937 HNIDTRRI-VFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTGMDILWTGTPMITMPLETL 995
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A V S L +G+ L+AK+ ++Y+++A +L +D L+ +R + + S + + +
Sbjct: 996 ASRVASSQLYALGVPELVAKDREDYIKIAKRLGTDREYLSQIRAKVWKARTTSTLFNVRQ 1055
Query: 532 FALGLESTYRNMWHRYCKGDVP 553
+ +E MW RY P
Sbjct: 1056 YCSDMERLLHKMWKRYADALPP 1077
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 43/182 (23%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L + ++ D ++ F +A NP CAEA +NLG +YK+R+ L +A+E Y++A+S+KP
Sbjct: 102 LSSIHFQLKDLDKSMQFSTMAIKANPKCAEAYSNLGNVYKERNQLAEALENYKIAVSLKP 161
Query: 64 NF-----------------SQSLN-----------------NLGVVYTVQGKMDAAAEMI 89
+F Q++N +LG + G+++ A
Sbjct: 162 DFIDGYINLAAALVATGDLDQAVNAYVSALQYNPDLYCVRSDLGNLLKAMGRLEDAKGCY 221
Query: 90 EKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
KAI P +A A++NLG ++ G I LAI +E+ +++DP+ +A YIN
Sbjct: 222 LKAIETQPQFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDA---------YINL 272
Query: 150 GH 151
G+
Sbjct: 273 GN 274
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 237 NLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLA 296
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N + NL VY QG +D A +M KAI P + +AY NL ++ G +S A A
Sbjct: 297 GNHAVVHGNLACVYYEQGLIDLAIDMYRKAIDLQPNFPDAYCNLANALKEKGLVSEAEAA 356
Query: 123 YEQCLKIDP---DSRN 135
Y + L++ P DS+N
Sbjct: 357 YNKALQLCPTHADSQN 372
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ ++ A Y AL I
Sbjct: 339 NLANALKEKGLVSEAEAAYNKALQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIY 398
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL + QGK+ A ++AI PT+A+AY+N+G ++ G + A+
Sbjct: 399 PEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDVGGALQC 458
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 459 YTRAIQINPGFADAHSN 475
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ + +A Y AL +
Sbjct: 305 NLACVYYEQGLIDLAIDMYRKAIDLQPNFPDAYCNLANALKEKGLVSEAEAAYNKALQLC 364
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + S NNL + QGK++ A + KA+ P +A A++NL + + G + AI+
Sbjct: 365 PTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLQDAINH 424
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 425 YKEAIRIAPTFADAYSN 441
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A D A+ Y A +NP ++LG + K L+ A CY A+ +
Sbjct: 169 NLAAALVATGDLDQAVNAYVSALQYNPDLYCVRSDLGNLLKAMGRLEDAKGCYLKAIETQ 228
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ A
Sbjct: 229 PQFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAVAA 288
Query: 123 YEQCLKI 129
Y + L +
Sbjct: 289 YLRALNL 295
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + + A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 271 NLGNVLKEARIFDRAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIDLQ 330
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G + A KA+ PT+A++ NNL + R+ G I A
Sbjct: 331 PNFPDAYCNLANALKEKGLVSEAEAAYNKALQLCPTHADSQNNLANIKREQGKIEDATRL 390
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L+I P+ A N
Sbjct: 391 YLKALEIYPEFAAAHSN 407
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN L L ++ +D + + AI ANP AEAY+NLG +Y++ ++ A++
Sbjct: 93 PNNVSVLLLLSSIHFQLKDLDKSMQFSTMAIKANPKCAEAYSNLGNVYKERNQLAEALEN 152
Query: 123 YEQCLKIDPD 132
Y+ + + PD
Sbjct: 153 YKIAVSLKPD 162
>gi|357607539|gb|EHJ65577.1| hypothetical protein KGM_15173 [Danaus plexippus]
Length = 873
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 169/374 (45%), Gaps = 43/374 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E K + A Y A PH A +NL + + + A+ Y A++I+
Sbjct: 174 NLGNVKREQGKIEEATRLYMRALQVFPHFAATHSNLASLLQQQGKFQDALYHYAQAINIQ 233
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G A +KAI NP +A+A+ NL +Y+D G+I AI +
Sbjct: 234 PKFADAYSNMGNTLREMQDTSGALRCFKKAIEINPLFADAHCNLASIYKDMGNICEAITS 293
Query: 123 YEQCLKIDPDSRNAGQN----------------RLLAMNYINEGH---DDKLFEAH---- 159
Y L+I D +A N R+ + I E DKL H
Sbjct: 294 YNNALRIKSDFPDAYSNLAHCLQIICNWECYQERMHKLVSIVENQLLTSDKLCSVHPHHT 353
Query: 160 ----------RDWGKRFMRLYSQ------YTSWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
++ R LY + T++ +TK + L IGYVS D+ H S+
Sbjct: 354 ILYPLSNVARKEIAARHAALYLEKVNMLTSTTFRHTKKRKGRLRIGYVSSDFGNHPTSHL 413
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEK-KVAAMVRE 262
+++ H+ N ++ Y+ + D KT FR K++ + + D+ I + AA +
Sbjct: 414 MQSIPGLHNRLNVEIFCYA--LNVDDKTT-FRNKIVSECDNFTDLSSIKSNIEAAAKINS 470
Query: 263 DKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQ 322
D I+IL+ + G+T + + A +PAP+QV W+GYP T+G IDY I+D ++ P
Sbjct: 471 DDINILINMNGYTKGARNEIFALKPAPIQVLWLGYPGTSGAGYIDYIISDEISSPLSMSD 530
Query: 323 KHVEELIRLPECFL 336
E+ +P +
Sbjct: 531 DFTEKFAYMPYTYF 544
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ F +FN L K PK L++W IL VPNS L + P +S F + GL
Sbjct: 675 VVFCNFNQLYKTDPKALEMWINILNNVPNSVLWLLAFPAAGESNLRHFA---QIRGLSPD 731
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ + I +H++ + D+ LDT G TTT + L+ G P VT+ G A V
Sbjct: 732 RI-IFSKIAPKEEHVRRGQISDVCLDTPLCNGHTTTMDILWTGTPVVTLPGKTLASRVAS 790
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT + LIAK+E Y ++A +L D +R + + S + D +++A+ +E
Sbjct: 791 SQLTALKCTELIAKSEKNYEEIATKLGMDAEYRRYIRAKVSNARITSTLFDCKHYAMAME 850
Query: 538 STYRNMWHRYCKGDVPS 554
Y MW Y G P+
Sbjct: 851 DLYNKMWQLYEDGKEPN 867
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y + D+AI Y A +P+ +A NL K++ +++A ECY AL +
Sbjct: 106 NLACLYYKQGFIDLAIDTYRQAIELHPNFPDAYCNLANALKEKGLVEEAEECYNKALYLC 165
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ +LNNLG V QGK++ A + +A+ P +A ++NL L + G A+
Sbjct: 166 PSHVDTLNNLGNVKREQGKIEEATRLYMRALQVFPHFAATHSNLASLLQQQGKFQDALYH 225
Query: 123 YEQCLKIDPDSRNAGQN 139
Y Q + I P +A N
Sbjct: 226 YAQAINIQPKFADAYSN 242
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+L V++ + + +A+ F+ L P+ NL +Y + +D A++ Y+ A+ +
Sbjct: 74 SLPVSFNKTIGRAIAVYFHCLKL--TPNNGIIHGNLACLYYKQGFIDLAIDTYRQAIELH 131
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G ++ A E KA+ P++ + NNLG + R+ G I A
Sbjct: 132 PNFPDAYCNLANALKEKGLVEEAEECYNKALYLCPSHVDTLNNLGNVKREQGKIEEATRL 191
Query: 123 YEQCLKIDP 131
Y + L++ P
Sbjct: 192 YMRALQVFP 200
>gi|170571769|ref|XP_001891856.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Brugia malayi]
gi|158603386|gb|EDP39326.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
putative [Brugia malayi]
Length = 1136
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 173/378 (45%), Gaps = 48/378 (12%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E K + A Y A P A A +NL I + + L A+ Y+ A+ I
Sbjct: 415 NLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLQDAINHYKEAIRIA 474
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G G + A + +AI NP +A+A++NL +++D+G++ AI +
Sbjct: 475 PTFADAYSNMGNTLKEMGDVGGALQCYTRAIQINPGFADAHSNLASIHKDSGNVPEAIQS 534
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD-----DKLFEAHRDW--GKRFMRLYSQ--- 172
Y LK+ PD +A N + I + +D KL D KR ++
Sbjct: 535 YSTALKLKPDFPDAFCNLAHCLQIICDWNDYDNRMKKLIAIVDDQLQKKRLPSVHPHHSM 594
Query: 173 ---------------------------------YTSWDNTKDPERPLVIGYVSPDYFTHS 199
Y ++ + +R L IGYVS D+ H
Sbjct: 595 LYPLTHAVRMAIAAKHAQLCIEKVQICHKAPYIYPDRNSVRKGQR-LRIGYVSSDFGNHP 653
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAA 258
S+ +++ H+ +N +V Y A+ D FR+K+M + + D+ I K A
Sbjct: 654 TSHLMQSIPGMHNRENVEVFCY-ALSPNDGTN--FRQKLMNESEHFVDLSQITCNGKAAD 710
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP 318
+ +D I IL+ + G+T + + A +PAP+QV W+GYP+T+G P +DY ITDS+ P
Sbjct: 711 RIHDDGIHILINMNGYTKGARNEIFALRPAPIQVMWLGYPSTSGAPFMDYIITDSVTSPL 770
Query: 319 ETKQKHVEELIRLPECFL 336
E + E+L +P F
Sbjct: 771 ELAHAYSEKLAYMPHTFF 788
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
L + I F +FN L KI P L +W IL VPNS L + P+ + RF + +
Sbjct: 922 GLPDDAIVFCNFNQLYKIDPPTLSMWCDILKLVPNSILWLLRFPYHGEPNVMRFCA---E 978
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
+++ R+ + + +H++ L D+ LDT G TT + L+ G P +TM
Sbjct: 979 RNIDTRRI-VFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTGMDILWTGTPMITMPLETL 1037
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A V S L +G+ L+AK+ ++Y+++A +L +D L+ +R + + S + + +
Sbjct: 1038 ASRVASSQLYALGVPELVAKDREDYIKIAKRLGTDREYLSQIRAKVWKARTTSTLFNVRQ 1097
Query: 532 FALGLESTYRNMWHRYCKGDVP 553
+ +E MW RY G P
Sbjct: 1098 YCSDMERLLHKMWKRYADGLSP 1119
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 279 NLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLA 338
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N + NL VY QG +D A +M KAI P + +AY NL ++ G +S A A
Sbjct: 339 GNHAVVHGNLACVYYEQGLIDLAIDMYRKAIDLQPNFPDAYCNLANALKEKGLVSEAEAA 398
Query: 123 YEQCLKIDP---DSRN 135
Y + L++ P DS+N
Sbjct: 399 YNKALQLCPTHADSQN 414
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ ++ A Y AL I
Sbjct: 381 NLANALKEKGLVSEAEAAYNKALQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIY 440
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL + QGK+ A ++AI PT+A+AY+N+G ++ G + A+
Sbjct: 441 PEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDVGGALQC 500
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 501 YTRAIQINPGFADAHSN 517
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L + ++ D ++ F +A NP CAEA +NLG +YK+R+ L +A+E Y++A+S+KP
Sbjct: 122 LSSIHFQLKDLDKSMQFSTMAIKANPKCAEAYSNLGNVYKERNQLAEALENYKIAVSLKP 181
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
+F NL G +D A A+ NP ++LG L + G + A
Sbjct: 182 DFIDGYINLAAALVATGDLDQAVNAYVSALQYNPDLYCVRSDLGNLLKAMGRLEDA 237
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ + +A Y AL +
Sbjct: 347 NLACVYYEQGLIDLAIDMYRKAIDLQPNFPDAYCNLANALKEKGLVSEAEAAYNKALQLC 406
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + S NNL + QGK++ A + KA+ P +A A++NL + + G + AI+
Sbjct: 407 PTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLQDAINH 466
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 467 YKEAIRIAPTFADAYSN 483
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + + A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 313 NLGNVLKEARIFDRAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIDLQ 372
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G + A KA+ PT+A++ NNL + R+ G I A
Sbjct: 373 PNFPDAYCNLANALKEKGLVSEAEAAYNKALQLCPTHADSQNNLANIKREQGKIEDATRL 432
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L+I P+ A N
Sbjct: 433 YLKALEIYPEFAAAHSN 449
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKA----------- 51
NL A D A+ Y A +NP ++LG + K L+ A
Sbjct: 189 NLAAALVATGDLDQAVNAYVSALQYNPDLYCVRSDLGNLLKAMGRLEDAKVPLYIDVQAR 248
Query: 52 -----------VECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
+ CY A+ +P F+ + +NLG V+ QG++ A EKA+ +P +
Sbjct: 249 FVQGIVNSTELLGCYLKAIETQPQFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFL 308
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKI 129
+AY NLG + ++A A+ AY + L +
Sbjct: 309 DAYINLGNVLKEARIFDRAVAAYLRALNL 337
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A A +NLG ++ + + A+ ++ A+ + PNF + NLG V
Sbjct: 263 YLKAIETQPQFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEAR 322
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136
D A +A+ +A + NL +Y + G I LAID Y + + + P+ +A
Sbjct: 323 IFDRAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIDLQPNFPDA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
L I+ +LDK+++ MA+ P +++ +NLG VY + ++ A E + A++ P
Sbjct: 122 LSSIHFQLKDLDKSMQFSTMAIKANPKCAEAYSNLGNVYKERNQLAEALENYKIAVSLKP 181
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+ + Y NL G + A++AY L+ +PD
Sbjct: 182 DFIDGYINLAAALVATGDLDQAVNAYVSALQYNPD 216
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN L L ++ +D + + AI ANP AEAY+NLG +Y++ ++ A++
Sbjct: 113 PNNVSVLLLLSSIHFQLKDLDKSMQFSTMAIKANPKCAEAYSNLGNVYKERNQLAEALEN 172
Query: 123 YEQCLKIDPD 132
Y+ + + PD
Sbjct: 173 YKIAVSLKPD 182
>gi|347736202|ref|ZP_08868901.1| glycosyl transferase group 1:TPR repeat-containing protein
[Azospirillum amazonense Y2]
gi|346920380|gb|EGY01508.1| glycosyl transferase group 1:TPR repeat-containing protein
[Azospirillum amazonense Y2]
Length = 619
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/503 (26%), Positives = 223/503 (44%), Gaps = 42/503 (8%)
Query: 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93
A NLGV + + A Y ALS+K +F + NLG++ QGK D A E+ ++I
Sbjct: 81 AYFNLGVELANVGDTVAAGAAYNAALSLKSDFLIAAINLGLMSEGQGKHDEALEIWRRSI 140
Query: 94 AANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN----RL------LA 143
+ N G L A + L P +A + RL +
Sbjct: 141 QPDDMRTTLLNQRGRLLERLNRFEEAERELYRSLLTVPKQSDAISHWVHLRLKMCAWPVY 200
Query: 144 MNYINEGHDDKLFEAHRDWGKRFMRLYSQ---YTSW-----DNTKDPER----------P 185
+ DD + + G M L+ + W PER
Sbjct: 201 LPIPGLTKDDMVASSG---GLTLMSLFDENAVVNRWVEQWISRFGAPERLAPAQGYAHEK 257
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
+ IGY+S DY H VS + + HD ++V Y + ++ R +++ W
Sbjct: 258 VRIGYLSSDYNLHPVSMLMVELIEKHDRAKFEVYGYDMGLDDNSY---LRHRILGAFDQW 314
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
+ + + +VAA++R+ ++DILV+L G T ++ G++ +PAPVQ+T++G+ + +P
Sbjct: 315 FRVVEMSDDQVAALMRQHELDILVDLNGLTDGSRPGIVRRKPAPVQITYLGFVGSQPIPE 374
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP--EAGPVCPTPALTNGFITFGSF 363
+DY I D P + + + +P C+ + P + L + F
Sbjct: 375 LDYAIVDDFVVPKDLAGDFHPKPLYMPICYQVNDSKALVDQSPTRESVGLPADKFVYTCF 434
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCK-PFCCDSVRHRFLSTLEQLGLESLRVDLL 422
+N KIT +V W RIL V NS L + + P+ +++ R + G++ R+ L
Sbjct: 435 SNTYKITEEVFDAWMRILGGVDNSVLWLLARTPWARQNMQERARAR----GIDPGRL-LF 489
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
++ L D+ LDT+PY TT ++L MG+P VT++G A + SLL
Sbjct: 490 AGPASPAQYLARLPLADVFLDTYPYNSGTTASDALRMGLPIVTLSGKTFASRMAGSLLRT 549
Query: 483 VGLKHLIAKNEDEYVQLALQLAS 505
VGL + + D+YV+LA++L +
Sbjct: 550 VGLPQGVTTSVDDYVKLAVKLGN 572
>gi|222619750|gb|EEE55882.1| hypothetical protein OsJ_04532 [Oryza sativa Japonica Group]
Length = 885
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 178/417 (42%), Gaps = 46/417 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y E D+A Y + NNL +IYK + N + A+ C+ L I
Sbjct: 347 NLGNVYMERNMMDIAASLYMATLTVTTGLSAPYNNLAMIYKQQGNCNHAITCFNEVLRID 406
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + L N G + G++ A + A+ PT AEA+ NL Y+D G + +I +
Sbjct: 407 PMAADCLVNRGNTFKEAGRITEAIQDYFHAVTIRPTMAEAHANLAAAYKDTGLLEASIIS 466
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDK--------------------------LF 156
Y+Q L++ D A N L + + + D
Sbjct: 467 YKQALQLRQDFPEATCNLLHTLQCVCDWDDRAEKFVEMSSLPSVQPFHAIAYPIDSTLAL 526
Query: 157 EAHRDWGKRFMRLYSQYTSWDNTKDPERP---------LVIGYVSPDYFTHSVSYFIEAP 207
E R + + + S++ T P L IGYVS D+ H +S+ + +
Sbjct: 527 EISRTYAAHYSLVASRFGLPTFTHSYPVPISNDGRTSRLRIGYVSSDFGNHPLSHLMGSI 586
Query: 208 LVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDI 267
H+ +V Y A+ + D +R+++ + + D+ + +A ++ EDKI I
Sbjct: 587 FGMHNQDTIEVFCY-ALSQDDG--TEWRQRIRSEAEHFIDVSSMSSDMIAKVINEDKIQI 643
Query: 268 LVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEE 327
L+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD P + + E+
Sbjct: 644 LINLNGYTKGARNEIFALQPAPIQVSYMGFPGTTGADYIDYLVTDEFVSPLKFSHIYSEK 703
Query: 328 LIRLPECFLCYTPSPE----AGPVCPTPALTNGF----ITFGSFNNLAKITPKVLQV 376
L+ LP C+ + GPVCP G F FN L K+ P +
Sbjct: 704 LVHLPHCYFVNDYKQKNRDVLGPVCPHKRADYGLPEDKFIFACFNQLYKMDPDIFNT 760
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 77/138 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG AY E + D+AI+ Y A H N EA NNLG KD ++A+ CYQ L+++
Sbjct: 279 NLGNAYHEQGQLDLAILSYRQAIHCNSSYVEAYNNLGNALKDAGRNEEAISCYQTCLALQ 338
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ Q+L NLG VY + MD AA + + + YNNL ++Y+ G+ + AI
Sbjct: 339 PSHPQALTNLGNVYMERNMMDIAASLYMATLTVTTGLSAPYNNLAMIYKQQGNCNHAITC 398
Query: 123 YEQCLKIDPDSRNAGQNR 140
+ + L+IDP + + NR
Sbjct: 399 FNEVLRIDPMAADCLVNR 416
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%)
Query: 5 GVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G Y ++ +FDM I E A P+C E N++ ++++ ++D A++ Y A+ ++P
Sbjct: 77 GAVYYQLREFDMCIAKNEEAVAIQPNCPECFNSIANAWREKGDVDNAIQFYVHAVQLRPT 136
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
F+ + NL YT +G + AAE +A+A NP A+AY NLG + + G A Y
Sbjct: 137 FADAWTNLANAYTRKGNLSQAAECCHQALALNPHLADAYCNLGDVLKAQGLYREAYSHYL 196
Query: 125 QCLKIDPDSRNAGQN 139
L I P NA N
Sbjct: 197 DALNIKPTFANAWNN 211
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
F+ A ++Y+ A NP +A NLG +YK A+ C+Q A KP + + NLG
Sbjct: 222 FNKAALYYKEAIKCNPAFYDAHLNLGNLYKVTGMRQDAIVCFQNAARAKPENAVAYGNLG 281
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
Y QG++D A +AI N +Y EAYNNLG +DAG AI Y+ CL + P
Sbjct: 282 NAYHEQGQLDLAILSYRQAIHCNSSYVEAYNNLGNALKDAGRNEEAISCYQTCLALQPSH 341
Query: 134 RNAGQN 139
A N
Sbjct: 342 PQALTN 347
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%)
Query: 7 AYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS 66
A+ E D AI FY A P A+A NL Y + NL +A EC AL++ P+ +
Sbjct: 113 AWREKGDVDNAIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQAAECCHQALALNPHLA 172
Query: 67 QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQC 126
+ NLG V QG A A+ PT+A A+NN+ L G + A Y++
Sbjct: 173 DAYCNLGDVLKAQGLYREAYSHYLDALNIKPTFANAWNNIAGLLMQWGDFNKAALYYKEA 232
Query: 127 LKIDPDSRNAGQN 139
+K +P +A N
Sbjct: 233 IKCNPAFYDAHLN 245
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY A A NPH A+A NLG + K + +A Y AL+IK
Sbjct: 143 NLANAYTRKGNLSQAAECCHQALALNPHLADAYCNLGDVLKAQGLYREAYSHYLDALNIK 202
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + NN+ + G + AA ++AI NP + +A+ NLG LY+ G AI
Sbjct: 203 PTFANAWNNIAGLLMQWGDFNKAALYYKEAIKCNPAFYDAHLNLGNLYKVTGMRQDAIVC 262
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
++ + P++ A N L Y +G D ++R
Sbjct: 263 FQNAARAKPENAVAYGN--LGNAYHEQGQLDLAILSYR 298
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 9 GEMLK----FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN 64
G++LK + A Y A + P A A NN+ + + +KA Y+ A+ P
Sbjct: 179 GDVLKAQGLYREAYSHYLDALNIKPTFANAWNNIAGLLMQWGDFNKAALYYKEAIKCNPA 238
Query: 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYE 124
F + NLG +Y V G A + A A P A AY NLG Y + G + LAI +Y
Sbjct: 239 FYDAHLNLGNLYKVTGMRQDAIVCFQNAARAKPENAVAYGNLGNAYHEQGQLDLAILSYR 298
Query: 125 QCLKIDPDSRNAGQN 139
Q + + A N
Sbjct: 299 QAIHCNSSYVEAYNN 313
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG Y AIV ++ A P A A NLG Y ++ LD A+ Y+ A+
Sbjct: 245 NLGNLYKVTGMRQDAIVCFQNAARAKPENAVAYGNLGNAYHEQGQLDLAILSYRQAIHCN 304
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
++ ++ NNLG G+ + A + +A P++ +A NLG +Y + + +A
Sbjct: 305 SSYVEAYNNLGNALKDAGRNEEAISCYQTCLALQPSHPQALTNLGNVYMERNMMDIAASL 364
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
Y L + N LAM Y +G+
Sbjct: 365 YMATLTVTTGLSAPYNN--LAMIYKQQGN 391
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 25 FHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84
+ NP E LG +Y D + + A++I+PN + N++ + +G +D
Sbjct: 63 YRANPRLLENLLLLGAVYYQLREFDMCIAKNEEAVAIQPNCPECFNSIANAWREKGDVDN 122
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A + A+ PT+A+A+ NL Y G++S A + Q L ++P
Sbjct: 123 AIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQAAECCHQALALNP 169
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 449 GTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGL-KHLIAKNEDEYVQLALQLASDV 507
G TT + L+ G+P +T+ A V SL G+ + ++ + +EY + A+ LA +
Sbjct: 766 GHTTGTDILWAGLPMITLPLEKMATRVAGSLCLATGIGEEMVVNSLEEYEERAVSLAENP 825
Query: 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
L L L+ + P+ D + LE Y +MW+ +C G P
Sbjct: 826 LKLEALTNKLKAVRMTCPLFDTARWVKNLERAYLHMWNLHCSGRHP 871
>gi|425454289|ref|ZP_18834035.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389805097|emb|CCI15371.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 711
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 182/378 (48%), Gaps = 26/378 (6%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
K ++ L IGY++ HSV + + +HD + ++ +Y+ + D T + FR+
Sbjct: 346 KKVQKKLTIGYLASTLKHHSVGWLSRWLIHHHDREKLQIAIYTINQEEDEITRQWFRDS- 404
Query: 239 MKKGGIWRDI-----YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
RDI Y + +VA +++D+IDILV+L T N +MA +PA QVT
Sbjct: 405 -------RDIIRHFPYAQNPLEVAQQIQQDQIDILVDLDSLTHNLTNQIMALKPAAKQVT 457
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY------TPSPEAGPV 347
W+G+ + +GL TIDY I D P + ++ + E++ RLPE +L TP+ +
Sbjct: 458 WLGW-DASGLATIDYYIADPYVLPQQAEEYYREKIYRLPETYLAVDGFEIGTPNLRREDL 516
Query: 348 CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLS 407
P T F S + K P +++ +IL VPNS ++K + ++ F
Sbjct: 517 EIPPDATIYF----SVQSGMKRHPDTIKLQMKILAQVPNSYFLIKGVG-KTEKIQELFTE 571
Query: 408 TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
G+ R+ LP + + H + D+ LDT+PY G TTT E L+ G+P VT+
Sbjct: 572 IAILEGVNPQRLRFLPRDIDEYTHRANLQIADVVLDTYPYNGATTTLEVLWQGIPLVTLV 631
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G + + + G++ I NE EY+ ++L D + ++ L +P+
Sbjct: 632 GEQFSARNSYTFMINAGIEAGIGWNEAEYIDWGVKLGLDRSLRQDISHQLLGNRDTAPLW 691
Query: 528 DGQNFALGLESTYRNMWH 545
G+ FA +E+ Y +W
Sbjct: 692 QGKKFAENMENAYLKIWE 709
>gi|324502359|gb|ADY41039.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Ascaris suum]
Length = 1100
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 171/378 (45%), Gaps = 48/378 (12%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E K + A Y A P A A +NL I + + L A+ Y+ A+ I
Sbjct: 377 NLANIKREQGKIEEATRLYLKALEIYPEFAAAHSNLASILQQQGKLQDAINHYKEAIRIA 436
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 437 PTFADAYSNMGNTLKEMGDIGGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIQS 496
Query: 123 YEQCLKIDPDSRNAG----------------QNRLLAMNYINEGHDDK------------ 154
Y LK+ PD +A NR+ + I E +K
Sbjct: 497 YSTALKLKPDFPDAFCNLAHCLQIICDWTDYDNRMRKLVAIVEEQLEKKRLPSVHPHHSM 556
Query: 155 ---LFEAHR------------DWGKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHS 199
L A R + + F R + + + R L IGYVS D+ H
Sbjct: 557 LYPLTHAARMAIAAKHAQLCLEKVQIFHRAPYSFPDRASVRKGHR-LKIGYVSSDFGNHP 615
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGI-DEKKVAA 258
S+ +++ H+ ++ +V Y+ V FR+K+M + + D+ I K A
Sbjct: 616 TSHLMQSIPGMHNRESVEVYCYALSVN---DGTNFRQKLMNESEHFVDLSLIPSNDKAAD 672
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP 318
+ +D I IL+ + G+T + + A +PAP+QV W+GYP T+G P +DY ITDS+ P
Sbjct: 673 RIHDDGIHILINMNGYTKGARNEIFAMRPAPIQVMWLGYPGTSGAPFMDYIITDSVTSPL 732
Query: 319 ETKQKHVEELIRLPECFL 336
E + E+L +P F
Sbjct: 733 ELAHAYSEKLAYMPHTFF 750
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I F +FN L KI P L +W IL VPNS L + PF ++ RF + + G+++
Sbjct: 890 IVFCNFNQLYKIDPSTLTMWCEILKLVPNSVLWLLRFPFHGEANVIRFCA---ERGIDAR 946
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
RV + + +H++ L D+ LDT G TT + L+ G P +TM A V
Sbjct: 947 RV-VFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTGMDILWTGTPMITMPLETLASRVAS 1005
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G+ L+AK+ ++Y+++A +L +D L+ +R + + S + D + + +E
Sbjct: 1006 SQLVALGVPELVAKDREDYIRIAARLGTDREYLSQIRAKVWKARTTSTLFDVRQYCADME 1065
Query: 538 STYRNMWHRYCKGDVP 553
MW RY +G P
Sbjct: 1066 QLLHRMWRRYAEGLPP 1081
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 43/182 (23%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L + ++ D ++ F +A NP+CAEA +NLG +YK+R+ L +A+E Y++A+ +KP
Sbjct: 106 LSSIHFQLKNLDKSMQFSSMAIKANPNCAEAYSNLGNVYKERNQLAEALENYRIAVRLKP 165
Query: 64 NF-----------------SQSL-----------------NNLGVVYTVQGKMDAAAEMI 89
+F Q++ ++LG + G+++ A
Sbjct: 166 DFIDGYINLAAALVAGGDLEQAVSAYLSALQYNPDLYCVRSDLGNLLKAMGRLEEAKVCY 225
Query: 90 EKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149
KAI P +A A++NLG ++ G I LAI +E+ +++DP+ +A YIN
Sbjct: 226 LKAIETQPQFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDA---------YINL 276
Query: 150 GH 151
G+
Sbjct: 277 GN 278
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E + A Y A P A++ NNL I +++ +++A Y AL I
Sbjct: 343 NLANALKEKGLVEEAEKAYNTALALCPTHADSQNNLANIKREQGKIEEATRLYLKALEIY 402
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL + QGK+ A ++AI PT+A+AY+N+G ++ G I A+
Sbjct: 403 PEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDIGGALQC 462
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 463 YTRAIQINPGFADAHSN 479
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ +++A + Y AL++
Sbjct: 309 NLACVYYEQGLIDLAIDMYRKAIELQPNFPDAYCNLANALKEKGLVEEAEKAYNTALALC 368
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + S NNL + QGK++ A + KA+ P +A A++NL + + G + AI+
Sbjct: 369 PTHADSQNNLANIKREQGKIEEATRLYLKALEIYPEFAAAHSNLASILQQQGKLQDAINH 428
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 429 YKEAIRIAPTFADAYSN 445
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 241 NLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLA 300
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N + NL VY QG +D A +M KAI P + +AY NL ++ G + A A
Sbjct: 301 GNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPNFPDAYCNLANALKEKGLVEEAEKA 360
Query: 123 YEQCLKIDP---DSRN 135
Y L + P DS+N
Sbjct: 361 YNTALALCPTHADSQN 376
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + + A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 275 NLGNVLKEARIFDRAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQ 334
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G ++ A + A+A PT+A++ NNL + R+ G I A
Sbjct: 335 PNFPDAYCNLANALKEKGLVEEAEKAYNTALALCPTHADSQNNLANIKREQGKIEEATRL 394
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L+I P+ A N
Sbjct: 395 YLKALEIYPEFAAAHSN 411
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A + A+ Y A +NP ++LG + K L++A CY A+ +
Sbjct: 173 NLAAALVAGGDLEQAVSAYLSALQYNPDLYCVRSDLGNLLKAMGRLEEAKVCYLKAIETQ 232
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ A
Sbjct: 233 PQFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAVAA 292
Query: 123 YEQCLKI 129
Y + L +
Sbjct: 293 YLRALNL 299
>gi|443475509|ref|ZP_21065456.1| TPR repeat-containing protein [Pseudanabaena biceps PCC 7429]
gi|443019628|gb|ELS33689.1| TPR repeat-containing protein [Pseudanabaena biceps PCC 7429]
Length = 741
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 172/364 (47%), Gaps = 10/364 (2%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
+GY+S HS+ + +HD+ + V Y A+ +T + ++
Sbjct: 379 VGYLSTCLRRHSIGWLSRWIFQHHDHDLFLVHAY-AISPLPNETDSIQAQIAYYSD---K 434
Query: 248 IYGIDE--KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
Y +D + + + +D+IDIL++L T +MA +PAP+QVTW+G+ + +G+P
Sbjct: 435 AYSLDSNVENIINQICQDEIDILIDLDSVTGGFICEVMALKPAPIQVTWLGF-DASGIPA 493
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALT--NGFITFGSF 363
IDY I D P + + + E++ RLP ++ + P L + + +
Sbjct: 494 IDYFIADPYVLPKDAQDYYSEKIWRLPNTYIAVDGFEFSIPSISREQLNIPDDAVVYLCT 553
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
K P + + +I+ +V NS ++K + + F+ ++ G+ R+ LP
Sbjct: 554 QTSYKRFPDTVHLQMQIINSVSNSYFLIKGWG-EEEGTKRFFIDIAKKEGVSEDRLRFLP 612
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
L +H + D+ LDT+PY G TTT E+L+M +P VT G + +++ V
Sbjct: 613 LADSEAEHRANLRIADVVLDTYPYNGATTTMETLWMCIPLVTKVGQQFSARNSYTMMMNV 672
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
G+ I+ ++EYV+ ++L D + L++ SP+ D + F +E+ Y+ M
Sbjct: 673 GVTEGISWTDEEYVEWGIRLGKDENLRKQIFWRLKESRKTSPLWDAKQFTKDIENAYQQM 732
Query: 544 WHRY 547
W Y
Sbjct: 733 WSNY 736
>gi|425444850|ref|ZP_18824891.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389735306|emb|CCI01162.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 712
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 145/574 (25%), Positives = 253/574 (44%), Gaps = 53/574 (9%)
Query: 5 GVAYGEMLKFDMAIV----FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ Y L D+A V ELA F P + + ++ + VE ++ L
Sbjct: 157 SLLYPHELTLDLAQVSLPYLEELADSFIPQAFQIA---ARVTNEQQSPVFGVEIIKLCLQ 213
Query: 61 IKPNFSQSLNNLGVVYTVQGKMD----AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI 116
++PN L L +Y + D A ++ + I PT N L +L +
Sbjct: 214 LRPNDLSLLEQLVNLYILAEDFDNSLITAYQL--REICLIPTLKLYSNYLILLILLRWGV 271
Query: 117 SLAID----AYEQCLKIDPDSRNAGQNRLLAMNYINEGH-----DDKLFEAHRDWGKRFM 167
ID Y+ L+ +N ++ +++N D+ A+R R
Sbjct: 272 WQEIDHIYQEYQNLLQELTSQKNITLEPIIKTSFLNVSSPLPYLGDRAL-ANRQLTNRIA 330
Query: 168 RLY----SQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSA 223
++ S T + K ++ L IGY++ HSV + + +HD + ++ +Y+
Sbjct: 331 EIFLDNNSLETPFITIKKAQKKLTIGYLASTLKHHSVGWLSRWLIHHHDREKLQIAIYTI 390
Query: 224 VVKADAKTIR-FREKVMKKGGIWRDI-----YGIDEKKVAAMVREDKIDILVELTGHTAN 277
+ D T + FR+ RDI Y + +VA +++D+IDILV+L T N
Sbjct: 391 NQEEDEITRQWFRDS--------RDIIRHFPYAQNPLEVAQQIQQDQIDILVDLDSLTHN 442
Query: 278 NKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLC 337
+MA +PA QVTW+G+ + +GL TIDY I D P + + + E++ RLPE +L
Sbjct: 443 LTNQIMALKPAAKQVTWLGW-DASGLATIDYYIADPYVLPQQAEAYYREKIYRLPETYLA 501
Query: 338 Y------TPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV 391
TP+ + P T I F + + + + P +++ +IL VPNS ++
Sbjct: 502 VDGFEIGTPNLRREDLEIPPDAT---IYFSAQSGMKR-HPDTIKLQMKILARVPNSYFLI 557
Query: 392 KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTT 451
K + ++ F + G+ R+ LP + + H + D+ LDT+PY G T
Sbjct: 558 KGVG-KTEKIQELFTEIAIREGVNPQRLRFLPRDIDEYTHRANLQIADVVLDTYPYNGAT 616
Query: 452 TTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALA 511
TT E L+ G+P VT+ G + + + G++ I NE EY+ ++L D +
Sbjct: 617 TTLEVLWQGIPLVTLVGEQFSARNSYTFMINAGIEAGIGWNEAEYIDWGVKLGLDRSLRQ 676
Query: 512 NLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545
++ L +P+ G+ FA +E+ Y +W
Sbjct: 677 DISHQLLGNRDIAPLWQGKKFAENMENAYLKIWE 710
>gi|292620687|ref|XP_001921543.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Danio rerio]
Length = 1102
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 183/419 (43%), Gaps = 97/419 (23%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV+ Y+ AL +
Sbjct: 354 NLANAMKEKCNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVF 413
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG--------------- 107
P+F+ + +NL V QGK+ A E+AI +PT+A+AY+N+G
Sbjct: 414 PDFAAAHSNLASVLQQQGKLQEALMHYEEAIRISPTFADAYSNMGNTLKEMQDIQGALRC 473
Query: 108 -------------------VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+++D+G+I AI +Y LK+ PD +A Y N
Sbjct: 474 YTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDA---------YCN 524
Query: 149 EGHDDKLFEAHRDWGKRFMRLYS------------------------------------- 171
H ++ D+ +R +L S
Sbjct: 525 LAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHG 584
Query: 172 ----------QYTSWDNTKDPERP---LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKV 218
T++++ KD + L +GY+S D+ H S+ +++ H+ + ++V
Sbjct: 585 NLCLDKINALHKTAYEHPKDLKASSGRLRVGYISSDFGNHPTSHLMQSIPGMHNSEKFEV 644
Query: 219 VVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMVREDKIDILVELTGHTAN 277
Y+ + D T FR KVM + + D+ I K A + +D I ILV + G+T
Sbjct: 645 FCYA--LSPDDGT-NFRVKVMAEAHHFIDLSHIPCNGKAADRIHQDGIHILVNMNGYTKG 701
Query: 278 NKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFL 336
+ + A +PAP+QV W+GYP T+G P +DY + D + P E +++ E L+ +P F
Sbjct: 702 ARNELFALRPAPIQVMWLGYPGTSGAPFMDYIVGDKVTSPIEVAKQYSETLVYMPNSFF 760
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
L + I + +FN L KI P LQ+WA IL VPNS + + P + ++ +
Sbjct: 890 GLPDDSIVYCNFNQLYKIDPPTLQMWANILKRVPNSVIWLLRFPAVGEPNIQQYA---QN 946
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
LGL + R+ P + +H++ L D+ LDT G TT + L+ G P VTM G
Sbjct: 947 LGLPASRIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETL 1005
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A V S LT +G LIA++ EY +A++L +D+ L +R + SP+ + +
Sbjct: 1006 ASCVAASQLTCLGCPELIARSRQEYEDIAVKLGTDMEFLKKVRARVWKQRICSPLFNTKQ 1065
Query: 532 FALGLESTYRNMWHRYCKGDVPS-LKRMEMLQ 562
+ + LE Y MW + G P L +M+ L+
Sbjct: 1066 YTVNLEKLYLQMWENHASGGKPDHLVKMQSLE 1097
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 320 NLACVYYEQGLIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEECYNTALRLC 379
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 380 PTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPDFAAAHSNLASVLQQQGKLQEALMH 439
Query: 123 YEQCLKIDPDSRNAGQN 139
YE+ ++I P +A N
Sbjct: 440 YEEAIRISPTFADAYSN 456
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A H NP ++LG + K L++A CY A+ +PNF
Sbjct: 190 VAAGDM---EGAVQAYVSALHCNPDLYCVRSDLGNLLKALGRLEEAKRCYLKAIETQPNF 246
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ + ++ +AY NLG + ++A A+ AY +
Sbjct: 247 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDASFLDAYINLGNVLKEARIFDRAVAAYLR 306
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 307 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 339
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 34/152 (22%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ DM+ F LA NP AEA +NLG ++K+R L +A+E Y+ AL +KP+F NL
Sbjct: 126 RLDMSFQFSTLATKQNPMLAEAYSNLGNVHKERGQLQEAIERYRQALRLKPDFIDGYINL 185
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 186 AAALVAAGDMEGAVQAYVSALHCNPDLYCVRSDLGNLLKALGRLEEAKRCYLKAIETQPN 245
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
+A A++NLG ++ G I LAI +E+ + +D
Sbjct: 246 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD 277
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 286 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRHAIELQ 345
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL + + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 346 PHFPDAYCNLANAMKEKCNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQL 405
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ PD A N
Sbjct: 406 YRKALEVFPDFAAAHSN 422
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A + +A NLG + K+ D+AV Y ALS+
Sbjct: 252 NLGCVFNAQGEIWLAIHHFEKAVTLDASFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 311
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + AI P + +AY NL ++ ++S A +
Sbjct: 312 PNHAVVHGNLACVYYEQGLIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEEC 371
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 372 YNTALRLCPTHADSLNN 388
>gi|189527635|ref|XP_001921570.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Danio rerio]
Length = 1045
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 183/419 (43%), Gaps = 97/419 (23%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV+ Y+ AL +
Sbjct: 297 NLANAMKEKCNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVF 356
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG--------------- 107
P+F+ + +NL V QGK+ A E+AI +PT+A+AY+N+G
Sbjct: 357 PDFAAAHSNLASVLQQQGKLQEALMHYEEAIRISPTFADAYSNMGNTLKEMQDIQGALRC 416
Query: 108 -------------------VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
+++D+G+I AI +Y LK+ PD +A Y N
Sbjct: 417 YTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDA---------YCN 467
Query: 149 EGHDDKLFEAHRDWGKRFMRLYS------------------------------------- 171
H ++ D+ +R +L S
Sbjct: 468 LAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHG 527
Query: 172 ----------QYTSWDNTKDPERP---LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKV 218
T++++ KD + L +GY+S D+ H S+ +++ H+ + ++V
Sbjct: 528 NLCLDKINALHKTAYEHPKDLKASSGRLRVGYISSDFGNHPTSHLMQSIPGMHNSEKFEV 587
Query: 219 VVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMVREDKIDILVELTGHTAN 277
Y+ + D T FR KVM + + D+ I K A + +D I ILV + G+T
Sbjct: 588 FCYA--LSPDDGT-NFRVKVMAEAHHFIDLSHIPCNGKAADRIHQDGIHILVNMNGYTKG 644
Query: 278 NKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFL 336
+ + A +PAP+QV W+GYP T+G P +DY + D + P E +++ E L+ +P F
Sbjct: 645 ARNELFALRPAPIQVMWLGYPGTSGAPFMDYIVGDKVTSPIEVAKQYSETLVYMPNSFF 703
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
L + I + +FN L KI P LQ+WA IL VPNS + + P + ++ +
Sbjct: 833 GLPDDSIVYCNFNQLYKIDPPTLQMWANILKRVPNSVIWLLRFPAVGEPNIQQYA---QN 889
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
LGL + R+ P + +H++ L D+ LDT G TT + L+ G P VTM G
Sbjct: 890 LGLPASRIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETL 948
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A V S LT +G LIA++ EY +A++L +D+ L +R + SP+ + +
Sbjct: 949 ASCVAASQLTCLGCPELIARSRQEYEDIAVKLGTDMEFLKKVRARVWKQRICSPLFNTKQ 1008
Query: 532 FALGLESTYRNMWHRYCKGDVPS-LKRMEMLQ 562
+ + LE Y MW + G P L +M+ L+
Sbjct: 1009 YTVNLEKLYLQMWENHASGGKPDHLVKMQSLE 1040
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 263 NLACVYYEQGLIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEECYNTALRLC 322
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 323 PTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPDFAAAHSNLASVLQQQGKLQEALMH 382
Query: 123 YEQCLKIDPDSRNAGQN 139
YE+ ++I P +A N
Sbjct: 383 YEEAIRISPTFADAYSN 399
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A H NP ++LG + K L++A CY A+ +PNF
Sbjct: 133 VAAGDM---EGAVQAYVSALHCNPDLYCVRSDLGNLLKALGRLEEAKRCYLKAIETQPNF 189
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ + ++ +AY NLG + ++A A+ AY +
Sbjct: 190 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDASFLDAYINLGNVLKEARIFDRAVAAYLR 249
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 250 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 282
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 34/152 (22%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ DM+ F LA NP AEA +NLG ++K+R L +A+E Y+ AL +KP+F NL
Sbjct: 69 RLDMSFQFSTLATKQNPMLAEAYSNLGNVHKERGQLQEAIERYRQALRLKPDFIDGYINL 128
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 129 AAALVAAGDMEGAVQAYVSALHCNPDLYCVRSDLGNLLKALGRLEEAKRCYLKAIETQPN 188
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
+A A++NLG ++ G I LAI +E+ + +D
Sbjct: 189 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD 220
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 229 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRHAIELQ 288
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL + + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 289 PHFPDAYCNLANAMKEKCNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQL 348
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ PD A N
Sbjct: 349 YRKALEVFPDFAAAHSN 365
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A + +A NLG + K+ D+AV Y ALS+
Sbjct: 195 NLGCVFNAQGEIWLAIHHFEKAVTLDASFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 254
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + AI P + +AY NL ++ ++S A +
Sbjct: 255 PNHAVVHGNLACVYYEQGLIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEEC 314
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 315 YNTALRLCPTHADSLNN 331
>gi|425467182|ref|ZP_18846466.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389830109|emb|CCI28120.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 711
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 180/378 (47%), Gaps = 26/378 (6%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
K L IGY++ HSV + + +HD + ++ +Y+ + D T + FR+
Sbjct: 346 KKASEKLTIGYLASTLKHHSVGWLSRWLIHHHDREKLQIAIYTINQEEDEITRQWFRDS- 404
Query: 239 MKKGGIWRDI-----YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
RDI Y + +VA +++D+IDILV+L T N +MA +PA QVT
Sbjct: 405 -------RDIIRHFPYAQNPLEVAQQIQQDQIDILVDLDSLTHNLTNQIMALKPAAKQVT 457
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY------TPSPEAGPV 347
W+G+ + +GL TIDY I D P + ++ + E++ RLPE +L TP+ +
Sbjct: 458 WLGW-DASGLATIDYYIADPYVLPQQAEEYYREKIYRLPETYLAVDGFEIGTPNLRREDL 516
Query: 348 CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLS 407
P T F S + K P +++ +IL VPNS ++K + ++ F
Sbjct: 517 EIPPDATIYF----SVQSGMKRHPDTIKLQMKILAQVPNSYFLIKGVG-KTEKIQELFTE 571
Query: 408 TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
G+ R+ LP + + H + D+ LDT+PY G TTT E L+ G+P VT+
Sbjct: 572 IAILEGVNPQRLRFLPRDIDEYTHRANLQIADVVLDTYPYNGATTTLEVLWQGIPLVTLV 631
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G + + + G++ I NE EY+ ++L D + ++ L +P+
Sbjct: 632 GEQFSARNSYTFMINAGIEAGIGWNEAEYIDWGVKLGLDRSLRQDISHQLLGNRDTAPLW 691
Query: 528 DGQNFALGLESTYRNMWH 545
G+ FA +E+ Y +W
Sbjct: 692 QGKKFAENMENAYLKIWE 709
>gi|33865520|ref|NP_897079.1| TPR domain-containing protein [Synechococcus sp. WH 8102]
gi|33632689|emb|CAE07501.1| TPR domain protein [Synechococcus sp. WH 8102]
Length = 928
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 8/335 (2%)
Query: 183 ERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKG 242
RPL IGY+S D+ TH++ +E HD YS D T R+R
Sbjct: 577 RRPLRIGYLSADFRTHAMGLLLEGLFEAHDPNQACTYAYSTSPIQDKLTERYRSSANH-- 634
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
+ D++ +++ +R D++D+L++LTG T ++ + +PAP + ++G+P++ G
Sbjct: 635 --FCDLHHLNDTNAIDQIRADELDVLIDLTGLTTFSRPAIACARPAPTVLNYLGFPSSQG 692
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGS 362
+D I D+ P E + + E++ RLP F P AG + L + + F
Sbjct: 693 SYYVDGIIADAALIPAEQEVNYPEQVWRLPHTFASRWRQPMAGISRSSFGLPDEAVVFCC 752
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
FN KIT + W IL AVP S L + KP S++ + ++ G++ R+
Sbjct: 753 FNRGDKITAGIFSSWMTILEAVPGSLLWLAVKPKALQSLQ----AQAQKRGIDPHRLVAA 808
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P + A + D+ LDT + +L G+P +T+AG+ +G SL
Sbjct: 809 PYQKPVQRFIAAMACADLFLDTAGFNAGAIGVLALNAGLPLITIAGNRFCARMGASLCNA 868
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANLRMSL 517
V LI + Y Q A++LA+ A+A LR L
Sbjct: 869 VHQPQLITTTPEAYQQKAIELATTPGAIAQLRTQL 903
>gi|166364311|ref|YP_001656584.1| hypothetical protein MAE_15700 [Microcystis aeruginosa NIES-843]
gi|166086684|dbj|BAG01392.1| hypothetical protein MAE_15700 [Microcystis aeruginosa NIES-843]
Length = 711
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 183/378 (48%), Gaps = 27/378 (7%)
Query: 180 KDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKV 238
K PE+ L IGY++ HSV + + +HD + ++ +Y+ + D T + FR+
Sbjct: 347 KVPEK-LTIGYLASTLKHHSVGWLSRWLIHHHDREKLQIAIYTINQEEDEITRQWFRDS- 404
Query: 239 MKKGGIWRDI-----YGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVT 293
RDI Y + +VA +++D+IDILV+L T N ++A +PA QVT
Sbjct: 405 -------RDIIRHFPYAQNPLEVAQQIQQDQIDILVDLDSLTHNLTNQIIALKPAAKQVT 457
Query: 294 WIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCY------TPSPEAGPV 347
W+G+ + +GL TIDY I D P + ++ + E++ RLPE +L TP+ +
Sbjct: 458 WLGW-DASGLATIDYYIADPYVLPQQAEEYYREKIYRLPETYLAVDGFEIGTPNLRREDL 516
Query: 348 CPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLS 407
P T F S + K P +++ +IL VPNS ++K + ++ F
Sbjct: 517 EIPPDATIYF----SVQSGMKRHPDTIKLQMKILAQVPNSYFLIKGVG-KTEKIQELFTE 571
Query: 408 TLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA 467
G+ R+ LP + + H + D+ LDT+PY G TTT E L+ G+P VT+
Sbjct: 572 IAILEGVNPQRLRFLPRDIDEYTHRANLQIADVVLDTYPYNGATTTLEVLWQGIPLVTLV 631
Query: 468 GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVC 527
G + + + G++ I NE EY+ ++L D + ++ L +P+
Sbjct: 632 GEQFSARNSYTFMINAGIEAGIGWNEAEYIDWGVKLGLDRSLRQDISHQLLGNRDTAPLW 691
Query: 528 DGQNFALGLESTYRNMWH 545
G+ FA +E+ Y +W
Sbjct: 692 QGKKFAENMENAYLKIWE 709
>gi|113477217|ref|YP_723278.1| type 11 methyltransferase [Trichodesmium erythraeum IMS101]
gi|110168265|gb|ABG52805.1| Methyltransferase type 11 [Trichodesmium erythraeum IMS101]
Length = 2490
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 159/315 (50%), Gaps = 15/315 (4%)
Query: 254 KKVAAMVREDKIDILVELTGHTAN--NKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K +R+D +DIL + TA N + + A VQVT I P TTG+ +IDY I+
Sbjct: 1841 KNQVQTIRDDNLDILFFGSNITATIKNSTLLATHRLARVQVTSINSPTTTGMASIDYYIS 1900
Query: 312 DSLADPPE-TKQKHVEELIRLPECFLCYT-PSPEAGPVC----PTPALTNGFITFGSFNN 365
L P E TK+ + E+L+ L LC+ P E PV + TN F S N
Sbjct: 1901 GKLTAPTEMTKEHYTEKLVNLEGSGLCFQDPIAETLPVVQPLRSSWGATNETTIFISGAN 1960
Query: 366 LAKITPKVLQVWARILCAVPNSRLVVK------CKPFCCDSVRHRFLSTLEQLGLESLRV 419
KI P++ + WA+IL AVPNS LV+ + S + TLE+ G+ S R+
Sbjct: 1961 FYKIIPEIRETWAKILRAVPNSILVLYPFNPNWTNSYPVGSFIQQMRGTLERHGIHSKRL 2020
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
++ + D + L DI LD+FPY G T+ + L +G+P V + G+ G +L
Sbjct: 2021 VVIKPLPSKSDIKKCLELADIYLDSFPYGGATSLLDPLMLGLPPVVVEGNALRFRQGPAL 2080
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV-CDGQNFALGLES 538
L ++ ++ LIA E+ Y+ LA++LA++ R +++ M ++P D ++++ +
Sbjct: 2081 LREINIEDLIADGEESYINLAVKLATNSEWRQQKRQEIKEKMQQNPAFLDSRSYSAEIGK 2140
Query: 539 TYRNMWHRYCKGDVP 553
++ ++ ++ P
Sbjct: 2141 LFQELFQKWQNIHAP 2155
>gi|304437268|ref|ZP_07397228.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369760|gb|EFM23425.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 479
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 178/368 (48%), Gaps = 26/368 (7%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IG+++P F H+ Y L H + Y V Y+ + +A T + + +
Sbjct: 127 LRIGFLAPQ-FDHTAVY---GALATHLTEQYDVYAYALTDRTNAPT-SWEAAGVHTAALA 181
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHT-ANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
+ G +++ A +R D+IDIL++L GH L ++A +PAPVQ+ + +TTG+P
Sbjct: 182 Q---GTPQEQ-AERIRADEIDILIDLGGHRDGGATLPVLALRPAPVQLAGLDAASTTGMP 237
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP--SPEAGPVCPTPALTNGFITFGS 362
+D +TD+L P T++ + EEL+ LP LCY + P+ A + +TFG
Sbjct: 238 FVDAFLTDALLSPAGTEEFYSEELLHLPHA-LCYAADDALRCAPLAERAA--DAPLTFGV 294
Query: 363 FNNLAKITPKVLQVWARILCAVPNSRLVVKC---KPFCCDSVRHRFLSTLEQLGLESLRV 419
+ I + L+VW RIL +P ++L+++ P ++ + L+ L L R+
Sbjct: 295 TQDFMCINEEALKVWGRILKKLPKAQLILQDTEDSPLRVTTI----VEMLDGLKLPMKRI 350
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+ P D Y +D+ LDTFP++G E+L GVP VT+ G H S+
Sbjct: 351 FVKPGGAGALD----YDSVDVVLDTFPFSGAAAAAEALLCGVPVVTLCGETHTARRSASV 406
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L G IA + Y +++ LA +V AL R +LRD + SP+ D + +
Sbjct: 407 LAAAGQMQWIAADARAYERISCALAEEVAALRTRRAALRDAVLASPLTDLAAYTASVAEA 466
Query: 540 YRNMWHRY 547
+ W +
Sbjct: 467 LDSYWDEH 474
>gi|113476143|ref|YP_722204.1| hypothetical protein Tery_2526 [Trichodesmium erythraeum IMS101]
gi|110167191|gb|ABG51731.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 1154
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 137/568 (24%), Positives = 244/568 (42%), Gaps = 62/568 (10%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
+D AI+ Y+ A +NP +A NLG ++ L A+E Y AL +KP++++ + +G
Sbjct: 567 YDQAIIHYQEAIKYNPKSYDAYANLGTALSNKGLLALALEKYYKALELKPSWAEVYSRIG 626
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ----CLKI 129
+ Q KM+ A + EKAI P + EA+ L L +++A A + C +I
Sbjct: 627 HIIK-QEKMEEAIALFEKAIELKPQFVEAHQQLCDLLSHTTKLAVARKAADNFCNSCGEI 685
Query: 130 DPDSRNAGQNRLLAMNYINEGHDDKLFEAHR----------------------------- 160
P + ++E + KL E +
Sbjct: 686 APILSGTAFLFSYFQSGVSEVANAKLLEVEKICYQSYKNFSELEIKLLYEIFLFAVYHLR 745
Query: 161 ---DWGKRFMRLYSQ---------YTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPL 208
+ F +L +Q Y + + L IG++S + HSV + E +
Sbjct: 746 DDLENNSNFYKLIAQQYYQNRPKIYQTTKTYISSSQSLKIGFLSKHFRRHSVGWCSEYLI 805
Query: 209 VYHDYQNYKVVVY-SAVVKADAKTIRFREKVMKKGGIWRDIY--GID-EKKVAAMVREDK 264
V +Y + +K D T RF + M W Y G ++ + EDK
Sbjct: 806 KELSQITPNVYLYITGPLKRDDVTQRFEK--MSVQTYWPKKYPNGFPCYTEIVEQILEDK 863
Query: 265 IDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKH 324
+D++V+L T + ++ +PAPV V+W+G+ + + +Y + D P ++ +
Sbjct: 864 LDVVVDLDSTTLPVNVHVLYEKPAPVCVSWLGF-DAPYISESNYFLCDWHTHPQGREKYY 922
Query: 325 VEELIRLPECFLCY----TPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARI 380
+E+L+RLPE + + S + + + + + + K PK+++ +I
Sbjct: 923 LEKLVRLPETSVAVGGFNSCSVDRNSTRNSLGIDSDQMVYLCIAPGRKTNPKMVRAQLKI 982
Query: 381 LCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDI 440
L P S L+ K + D + +L E LG++ R+ L +H Y + D+
Sbjct: 983 LQHTPKSILIRKGQG-DVDVIYQSYLEESENLGIDFNRIMFLGQTQTEEEHRAIYQIADV 1041
Query: 441 SLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLA 500
LD++PY G T E+L+ +P +T AG + +G S L V L +A + +EY +
Sbjct: 1042 LLDSYPYNGGTHNLEALWSNLPIITRAGKQYLSRMGYSFLQNVNLDVGVAWSWEEYTEWG 1101
Query: 501 LQLASDVTALANLRMSLRDLMSKSPVCD 528
++L D LR S+R+ + KS D
Sbjct: 1102 IKLGQD----NGLRNSVREHLQKSKDLD 1125
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
FD I + A PH A A LG I++ ++ L+KA+ Y ALSI+PNF+Q N+G
Sbjct: 55 FDAGISACKEAVKIQPHFASAYLTLGNIFQSQNLLEKAINTYYEALSIEPNFAQVYANIG 114
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
VY G+ + A +KA+ N A LG ++ G AI Y++ L+I P
Sbjct: 115 SVYYKLGEFNLAISNYQKALEINSNLASVQLMLGNVFSLIGEFEQAIYCYQKLLQIKPKD 174
Query: 134 RNA 136
A
Sbjct: 175 AQA 177
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A++ Y+ A P EA L +Y + N D + + A+ I+P+F+ + LG ++
Sbjct: 24 AMIAYQKALAIKPDYVEAYKKLAEVYLMQGNFDAGISACKEAVKIQPHFASAYLTLGNIF 83
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
Q ++ A +A++ P +A+ Y N+G +Y G +LAI Y++ L+I+ +
Sbjct: 84 QSQNLLEKAINTYYEALSIEPNFAQVYANIGSVYYKLGEFNLAISNYQKALEINSN 139
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%)
Query: 43 KDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA 102
KD L A+ YQ AL+IKP++ ++ L VY +QG DA ++A+ P +A A
Sbjct: 16 KDSGQLYTAMIAYQKALAIKPDYVEAYKKLAEVYLMQGNFDAGISACKEAVKIQPHFASA 75
Query: 103 YNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
Y LG +++ + AI+ Y + L I+P+
Sbjct: 76 YLTLGNIFQSQNLLEKAINTYYEALSIEPN 105
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
LG + ++NL+ A+ Y+ L I P ++ N+G VY G+ A +KAI P
Sbjct: 385 LGNAFYQQNNLEAALHAYRQGLEIDPELAEVQGNIGSVYLQLGQYKQALFHYQKAIDLKP 444
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG-----QNRLLAMNYINEG 150
A Y N+G L++ G + AI+A+ + L+I PD A N L+ ++ IN+
Sbjct: 445 GLAGIYWNIGKLFQCLGKVDEAINAWSKALEIQPDIVEADFHFKLGNTLVKLSRINDA 502
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
+ LG ++ + + AI YE A + EA +NL I ++ + + AV Y AL I
Sbjct: 487 FKLGNTLVKLSRINDAIKSYERAINLKQDYTEAYSNLANILGEKGDREAAVNYYNQALKI 546
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
P L ++G D A ++AI NP +AY NLG + G ++LA++
Sbjct: 547 NPELKFLHEKLANNLLLKGDYDQAIIHYQEAIKYNPKSYDAYANLGTALSNKGLLALALE 606
Query: 122 AYEQCLKIDP 131
Y + L++ P
Sbjct: 607 KYYKALELKP 616
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG + + AI Y A P+ A+ N+G +Y + A+ YQ AL I
Sbjct: 79 LGNIFQSQNLLEKAINTYYEALSIEPNFAQVYANIGSVYYKLGEFNLAISNYQKALEINS 138
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N + LG V+++ G+ + A +K + P A+AY L ++ +I LAI+ Y
Sbjct: 139 NLASVQLMLGNVFSLIGEFEQAIYCYQKLLQIKPKDAQAYFKLAEVFALYSNIELAINYY 198
Query: 124 EQCLKIDPD 132
++ L I P+
Sbjct: 199 QKSLSIKPN 207
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+G Y ++ +F++AI Y+ A N + A LG ++ ++A+ CYQ L IK
Sbjct: 112 NIGSVYYKLGEFNLAISNYQKALEINSNLASVQLMLGNVFSLIGEFEQAIYCYQKLLQIK 171
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYR 111
P +Q+ L V+ + ++ A +K+++ P Y EA+ L L +
Sbjct: 172 PKDAQAYFKLAEVFALYSNIELAINYYQKSLSIKPNYWEAFLKLSQLIK 220
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCA----EACNNLGVIYKDRDNLDKAVECYQMA 58
NL GE + A+ +Y A NP + NNL + + + D+A+ YQ A
Sbjct: 522 NLANILGEKGDREAAVNYYNQALKINPELKFLHEKLANNLLL----KGDYDQAIIHYQEA 577
Query: 59 LSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
+ P + NLG + +G + A E KA+ P++AE Y+ +G + + +
Sbjct: 578 IKYNPKSYDAYANLGTALSNKGLLALALEKYYKALELKPSWAEVYSRIGHIIKQE-KMEE 636
Query: 119 AIDAYEQCLKIDPDSRNAGQ 138
AI +E+ +++ P A Q
Sbjct: 637 AIALFEKAIELKPQFVEAHQ 656
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNN--LGVIYKDRDNLDKAVECYQMAL 59
+N+G + + K D AI + A P EA + LG ++ A++ Y+ A+
Sbjct: 451 WNIGKLFQCLGKVDEAINAWSKALEIQPDIVEADFHFKLGNTLVKLSRINDAIKSYERAI 510
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
++K +++++ +NL + +G +AA +A+ NP + L G A
Sbjct: 511 NLKQDYTEAYSNLANILGEKGDREAAVNYYNQALKINPELKFLHEKLANNLLLKGDYDQA 570
Query: 120 IDAYEQCLKIDPDSRNAGQN 139
I Y++ +K +P S +A N
Sbjct: 571 IIHYQEAIKYNPKSYDAYAN 590
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 31 CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIE 90
AEA N + + NL A+ + AL I+P+ S S LG + Q ++AA
Sbjct: 344 AAEAYINQANLALKQGNLASAIASCKQALKIQPDHSPSYVILGNAFYQQNNLEAALHAYR 403
Query: 91 KAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+ + +P AE N+G +Y G A+ Y++ + + P
Sbjct: 404 QGLEIDPELAEVQGNIGSVYLQLGQYKQALFHYQKAIDLKP 444
>gi|285017296|ref|YP_003375007.1| hypothetical protein XALc_0485 [Xanthomonas albilineans GPE PC73]
gi|283472514|emb|CBA15019.1| hypothetical protein XALC_0485 [Xanthomonas albilineans GPE PC73]
Length = 569
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 166/363 (45%), Gaps = 16/363 (4%)
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY-SAVVKADAKTIRFREKVMKKGG 243
PL IG++S + H A L H + + ++ A+ D TIR R +
Sbjct: 205 PLRIGFLSNGFGAHPTGLLTVA-LFEHLRAHADLQIHLFALNGEDRSTIRAR--LQAAAH 261
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
W + + +A +RE ID+L++L G ++A +PAPVQ+ W+ YP T+G
Sbjct: 262 TWHSVTAQAHRTIAQRIRETGIDVLLDLRGWGGGGTPEVLALRPAPVQINWLAYPGTSGA 321
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFI 358
P +DY I D A PP + E ++RL F PS V P+ L
Sbjct: 322 PWMDYVIADGYALPPPLTAHYSERVLRLTRAF---QPSDTTRHVGTPPSRHDCGLPEAGT 378
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
F FNN K++P+ + +L VP+S L + P D+ R + LE R
Sbjct: 379 VFCCFNNSYKLSPRSMARMLAVLRQVPDSVLWLLSGPGQADA---RLREAACKADLEPTR 435
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ +P L + +++ Y D+ LDT PY TT ++L+ G P +T G+ A V S
Sbjct: 436 LRFMP-KLAHPEYLSRYRHADLFLDTHPYNAHTTASDALWAGCPVLTCPGNTFAARVAGS 494
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
L + + + ++D ++ A++L D +AL LR LR + S + D Q FA +
Sbjct: 495 LNHHLNMDDMNVVDDDAFIATAVRLGRDPSALHVLRERLRQRRASSGLFDMQGFAADFAA 554
Query: 539 TYR 541
R
Sbjct: 555 LLR 557
>gi|409991408|ref|ZP_11274672.1| hypothetical protein APPUASWS_10241 [Arthrospira platensis str.
Paraca]
gi|291571117|dbj|BAI93389.1| hypothetical protein [Arthrospira platensis NIES-39]
gi|409937730|gb|EKN79130.1| hypothetical protein APPUASWS_10241 [Arthrospira platensis str.
Paraca]
Length = 730
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 135/589 (22%), Positives = 257/589 (43%), Gaps = 76/589 (12%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACN--NLGVIYKDRDNLDKAVECYQMALS 60
NL A ++ + A++ + A N A + N G + L++A+ ++ A+
Sbjct: 124 NLARALRQLGRESEALIVEQKAHQINSSTGGAIHLYNQGNQLVNEGKLEEAIALWKQAIV 183
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
PN +++ +G+++ QG+ A +EKAI P + AY N+ +YRD+ ++ A
Sbjct: 184 ADPNLAEAYCQIGIIHRHQGQPKEAIPFLEKAIELKPNFIAAYQNICGIYRDSSDLASAR 243
Query: 121 DAYEQCLK----IDP-----------------------------------------DSRN 135
+A E LK IDP + ++
Sbjct: 244 NAVESYLKNCGSIDPIMTAIYAVSIYQVSGLNAVALPRFLQLESQVPALLAHTKPVEIKS 303
Query: 136 AGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS---------QYTSWDNTKDPERPL 186
N L A+ Y+ + + K ++ R R++ L S + N P + +
Sbjct: 304 LYANLLFALPYLRDDLE-KNYKLQRLISDRYVSLISPTSTPTTIQTTKGFGNIPSP-KTV 361
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY-SAVVKADAKTIRFREKVMKKGGIW 245
IG +S ++ HSV + + N ++ +Y S D +T F + K
Sbjct: 362 KIGILSKNFCRHSVGWCSADVIKELAALNTEIYLYWSDRPTRDNQTPAFEQVAHKVFAPQ 421
Query: 246 RDIYGI-DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
G+ + +++ +R+D+IDIL++L + ++A QPA ++W+G+ ++ +
Sbjct: 422 NFPQGLPNPQEIVNAIRQDQIDILLDLDSLSVQINTEILAHQPARFCISWLGF-DSPQIS 480
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP----SPEAGPVCPTPALTNGFITF 360
+Y I D PP + + E+LIR+P+ F+ + S + + ++ + +
Sbjct: 481 ADNYFIGDHYTHPPGRESYYTEKLIRMPQTFMAVSGFKRVSADQNLLRQAYRISRDQVVY 540
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS--VRHRFLSTLEQLGLESLR 418
K P +++ IL VP+S LV K D+ +R + + + +G+ R
Sbjct: 541 LCVAPGRKFNPDLVKAQVNILKQVPDSILVHKA---LGDTQIIRETYAAACKAIGVGQHR 597
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ + +H + Y L D+ LD++PY G T + E+L+ P VT GS +G S
Sbjct: 598 IKQISRFATEEEHRKIYILADVLLDSYPYNGGTHSLEALWFNTPLVTRRGSQFLSRMGYS 657
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRD--LMSKSP 525
L VG++ IA + ++Y A++L + LR S+R+ + SK+P
Sbjct: 658 FLKAVGVEMGIADSWEDYQNWAIRLGRE----PELRQSIREQLMASKNP 702
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
+D AI + A P+ +G + + R + +A+ Y AL PN Q+ NLG
Sbjct: 33 YDQAIAACQKALELKPNWPPVYVTMGNVSQGRGQIQEAIRYYAKALEFDPNLPQAHANLG 92
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
++ QG++++A +KAIA P Y NL R G S A+ ++ +I+ +
Sbjct: 93 SMFYKQGQLESAIASYQKAIALKPDLTAVYVNLARALRQLGRESEALIVEQKAHQINSST 152
Query: 134 RNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164
A +NEG KL EA W +
Sbjct: 153 GGAIHLYNQGNQLVNEG---KLEEAIALWKQ 180
>gi|94264577|ref|ZP_01288362.1| Glycosyl transferase, family 2 [delta proteobacterium MLMS-1]
gi|93454995|gb|EAT05229.1| Glycosyl transferase, family 2 [delta proteobacterium MLMS-1]
Length = 994
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 213/538 (39%), Gaps = 64/538 (11%)
Query: 50 KAVECYQMALSIKPNFSQSLNNL-GVVYTVQGKMDAAAE---MIEKAIAANP-------- 97
KA E A+S+ P + L G + QG+ D AA ++ KA A P
Sbjct: 81 KAFEAAGKAVSMAPESAIGGALLCGQLQHRQGRYDEAASYFLLVVKATRATPEQVLIAAN 140
Query: 98 -------------TYAEAYNNLGVLYRDAGS---ISLAIDAYEQCLKIDPDSRNAGQNRL 141
A A+ LG R I+L +EQ + R A
Sbjct: 141 TLVRFGHQDTAYHAAARAFEQLGRPLRWVPVLLYIALITANWEQLESLISQLRQA----- 195
Query: 142 LAMNYINEGHDD--KLFEAHRDWGKRFMRLYSQYTSWDNTKDPE--------------RP 185
Y E H D +L H W + W P R
Sbjct: 196 ----YAKERHQDCHELLRTHLLWCDNTAYNIAAVKEWSRKNIPAIEPGAPPAIEPLAGRR 251
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GY+S D+ H S I L HD ++ +Y + R E +
Sbjct: 252 LRLGYLSSDFREHPTSRLILGLLAGHDKSRVELFMYCCGWDDGSALRRAVETHFEHK--- 308
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
R I + + A ++R D+ID+L++L G T N+L ++A +PA VQV+++G+P + G
Sbjct: 309 RSIAAMSDGAAAELIRADRIDVLIDLNGPTLFNRLAILAHRPAAVQVSYLGFPGSVGGRV 368
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN----GFITFG 361
+DY + D P ++ + E +IRL + + PV P A + G
Sbjct: 369 VDYIVADHHTVPKGEEKHYPERIIRLVGTYQPNAFRFQQRPVVPARAELGLPDEDVLIVG 428
Query: 362 SFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL 421
FN + K+ +V W IL P + L V P + R L + + R+
Sbjct: 429 MFNKINKVRGEVWAAWMSILKLAPKAWLWV-LDPGL--AARDNLLKAAREHQVAEKRILF 485
Query: 422 LPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT 481
P L H+ D+ LD +PY G T+T ++L+ GVP +T+AG A V LL
Sbjct: 486 AP-ALPQAGHLSRLGACDLMLDPWPYGGHTSTTDALFAGVPVITLAGRNFAGRVSAGLLK 544
Query: 482 KVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L L+ + +Y+Q A L ++ L L+ +R+ + S + Q A LES
Sbjct: 545 SANLPALVRGSVQDYIQTAAGLLNNRKELQRLQRFVREKVPHSLLFANQGQARQLESA 602
>gi|448747261|ref|ZP_21728922.1| Methyltransferase FkbM [Halomonas titanicae BH1]
gi|445565173|gb|ELY21285.1| Methyltransferase FkbM [Halomonas titanicae BH1]
Length = 1072
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 129/231 (55%), Gaps = 8/231 (3%)
Query: 373 VLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432
VL+ WA+I+ A+PNS+L++K + + + T+ G+ES R+ L+ + + +
Sbjct: 2 VLEQWAKIMLALPNSKLMLKSMQYKSEERCQKIKDTMALYGIESDRL-LIEGPSPHAELL 60
Query: 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKN 492
AY+ +DISLD +PY+G TTCES MGVP V++ G A + L G+ L+ +
Sbjct: 61 DAYNKVDISLDPWPYSGGLTTCESFLMGVPVVSLPGPTFAGRHSATHLINAGMPELVVSS 120
Query: 493 EDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDV 552
+EY + L+LASD+ +L+ +R LR ++ +SPVCD FA R++W R+C+G
Sbjct: 121 WEEYRERVLELASDLDSLSTIRQHLRQVLLESPVCDASRFAKHFTDAMRSIWQRHCEGKQ 180
Query: 553 PSLKRMEMLQQQVVSEEPSKFSEPTKIIFAKEGSPGSVMPNGFNQASPSML 603
P+ + + +E + P +++A+ G+V GFN + PS +
Sbjct: 181 PAALTFDKMGLAKFEDEET----PVNVVYAESMESGAV---GFNWSLPSKI 224
>gi|432879797|ref|XP_004073552.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Oryzias latipes]
Length = 1016
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 172/385 (44%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 300 NLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 359
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 360 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 419
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 420 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLDKNRL 470
Query: 172 ------------------------------------QYTSWDNTKDPERP---LVIGYVS 192
++++ KD + L IGYVS
Sbjct: 471 PSVHPHHSMLYPLSHNFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASGGRLRIGYVS 530
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KV+ + + D+ I
Sbjct: 531 SDFGNHPTSHLMQSIPGMHNPEKFEVFCYA--LSPDDST-NFRVKVVAEAHHFTDLSQIP 587
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I+ILV + G+T + + A +PAP+Q W+GYP T+G P +DY IT
Sbjct: 588 CNGKAADRIHQDGINILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGAPFMDYIIT 647
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 648 DKETSPMEVAEQYSEKLAYMPNTFF 672
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL V NS L + P + ++ + LGL +
Sbjct: 810 IVYCNFNQLYKIDPPTLQMWANILKRVSNSVLWLLRFPAVGEPNIQQYA---QNLGLPAS 866
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 867 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 925
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G LIA+N +Y ++A++L SD+ L +R + SP+ + + + + LE
Sbjct: 926 SQLQCLGCPELIAQNRQDYEEIAVKLGSDMEYLKMIRARVWKHRICSPLFNTKQYTIDLE 985
Query: 538 STYRNMWHRYCKGDVPSLKRMEMLQQQVVSEEPSKFSE 575
Y+ MW + G+ P +V +P++ SE
Sbjct: 986 KLYQLMWEHHSNGNKPD---------HLVKLQPAEASE 1014
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 232 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 291
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 292 PTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 351
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 352 YKEAIRISPTFADAYSN 368
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 21/151 (13%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL--- 69
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F
Sbjct: 60 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIXXXXXX 119
Query: 70 ---------NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
++LG + G+++ A KAI P +A A++NLG ++ G I LAI
Sbjct: 120 XXXDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAI 179
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+E+ + +DP+ +A YIN G+
Sbjct: 180 HHFEKAVTLDPNFLDA---------YINLGN 201
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV+ Y+ AL +
Sbjct: 266 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVF 325
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 326 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 385
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 386 YTRAIQINPAFADAHSN 402
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 164 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 223
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 224 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 283
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 284 YNTALRLCPTHADSLNN 300
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 198 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 257
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 258 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQL 317
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 318 YRKALEVFPEFAAAHSN 334
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNP--------------HCAEACNNLGVIYKDRDNL 48
NLG Y E + AI Y A P +C + +LG + K L
Sbjct: 84 NLGNVYKERGQLQEAIEHYRHALRLKPDFIXXXXXXXXXDLYCVRS--DLGNLLKALGRL 141
Query: 49 DKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
++A CY A+ +PNF+ + +NLG V+ QG++ A EKA+ +P + +AY NLG
Sbjct: 142 EEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGN 201
Query: 109 LYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+ ++A A+ Y + L + P+ N LA Y +G D + +R
Sbjct: 202 VLKEARIFDRAVAGYLRALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 251
>gi|301123575|ref|XP_002909514.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110
kDa subunit, putative [Phytophthora infestans T30-4]
gi|262100276|gb|EEY58328.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110
kDa subunit, putative [Phytophthora infestans T30-4]
Length = 1353
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 148/599 (24%), Positives = 260/599 (43%), Gaps = 81/599 (13%)
Query: 17 AIVFYELAFHFNPHCAEAC-NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVV 75
A+ +E A +P A N V+ R +++ E L ++P+ Q+ +LG +
Sbjct: 135 ALGHFEEALEIDPEFVGALYNKASVLLALRRDMESK-EMLLKVLELEPDDRQAHLDLGRI 193
Query: 76 YTVQGKMDAAAEMIEKAIAANPTYAE---AYNNLGVLYRDAGSISLAIDAYEQCLKIDP- 131
Y G ++ A E + I T E +N GV ++ +S A+ YE+ L ID
Sbjct: 194 YFEHGDLEKALEHEDYVINMATTSKEKLQGMHNKGVFLKEYDLLSRALKVYEEMLLIDTV 253
Query: 132 ------DSRNAG------------QNRLLAMNY------INEGH------DDKLFEA--- 158
D NA +N++LA I++ D L +
Sbjct: 254 ETYVLVDMMNAKRSFCDWEGMEKLENQVLAAAQRQFELEISQEQAVFLPFDSTLVKVSDA 313
Query: 159 -HRDWGKRFMRLYSQYT--------------SWDNTKDPERPLVIGYVSPDYFTHSVSYF 203
R+ R ++Y Q + SWD +R L IGY+S D+ H + +
Sbjct: 314 FRRNLAIRASKIYEQPSTLELLPLSWSVNEPSWDRPTTRQR-LKIGYLSFDFRDHPMGHL 372
Query: 204 IEAPLVYHDY--QNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVR 261
+ H + YS ++A + +R + K G++RD+ G+ + + A +
Sbjct: 373 TLGLIEQHAALASGVDTICYSYGPNSEA-SAPWRRQFEDKCGVFRDLLGMSDLQAAQTIG 431
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D ID+LV+L HT +LG+ + +P+ + V ++GYP T G D+ + D L PPE
Sbjct: 432 LDGIDVLVDLMAHTKGARLGIPSLRPSRIVVNYLGYPGTMGSSFTDFAMVDKLVLPPEVA 491
Query: 322 QKHV-EELIRLPECFLC--YTPSPEA-GPV-CPTP-----ALTNGFITFGSFNNLAKITP 371
+ E+++ LP + Y P A G V C L + F +FN + K+
Sbjct: 492 AASMTEQVVYLPFTYQANRYEPWISACGDVDCQRANRSQHGLPTDGLVFCNFNTINKMES 551
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL---- 427
+ VW IL +PNS L + P D++R +E+L +++ +LP ++
Sbjct: 552 ESFAVWMSILRQIPNSVLWL-LAPSGPDALR-----VMEKLHDQAMAHGVLPSRVIFAPR 605
Query: 428 --NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL-TKVG 484
+ H+ ++ DI LD+F Y +T ++L+ VP VT+ G V SL+ +
Sbjct: 606 VDKYSHLARITVADIFLDSFVYNAHSTAADALWANVPIVTLWGDTFPSRVAASLIRNAIP 665
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
L++++ +Y ++A+ LA L +R +L SP+ + + +E+ Y M
Sbjct: 666 YPELVSQSVKDYERMAVYLARTPKVLRRIRNALAANTLTSPLFNTKQTTESIETAYEVM 724
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK------PNFSQSLNNLGVVYTVQGKM 82
P A A NNL ++ R+ D+A++ + L N + NN+G + +GK
Sbjct: 68 PEIAAAYNNLAMLIFGRNERDEALQLLERGLQAAEATQDWENVANIHNNIGFIARERGKW 127
Query: 83 DAAAEM-----IEKAIAANPTYAEA-YNNLGVLY---RDAGSISLAIDAYEQCLKIDPDS 133
A + E+A+ +P + A YN VL RD S + + + L+++PD
Sbjct: 128 SVAYSLEALGHFEEALEIDPEFVGALYNKASVLLALRRDMESKEMLL----KVLELEPDD 183
Query: 134 RNAGQNRLLAMNYINEGHDDKLFEAHRDW 162
R A + L Y G +K E H D+
Sbjct: 184 RQAHLD--LGRIYFEHGDLEKALE-HEDY 209
>gi|301106148|ref|XP_002902157.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
[Phytophthora infestans T30-4]
gi|262098777|gb|EEY56829.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase
[Phytophthora infestans T30-4]
Length = 744
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 218/496 (43%), Gaps = 22/496 (4%)
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
+F LGV G ++ A + E A+ N ++++ +LG Y + A+ A
Sbjct: 24 SFPSVFQYLGVAQYSLGDLEEATKTFELAVKVNENDSQSWVHLGNCYLFQKRLPEAVAAL 83
Query: 124 EQCLKIDPDSRNAGQNRLLAMNYINEGHD--DKLFEAHR----DWGKRFMRLYSQYTSWD 177
E +K S + + A N++ + D D L + R + R L +
Sbjct: 84 EVGVK-QKGSVKSLYALVKARNWMADWEDREDSLGQLRRRAYDELEARAEILCCDERTNL 142
Query: 178 NTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREK 237
N + PE L IG+VS D+ H VS + L +++ VY + +DA + R
Sbjct: 143 NLQAPE--LRIGFVSSDFGVHPVSSLLRGLLALLSSPDHQTKVYCFSL-SDASSWWSR-N 198
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGY 297
+ + + G + A +++ I +LV+L GHT + + + +PAPVQV ++GY
Sbjct: 199 ISRTVDFMISLNGKNTLDAAKLIQSYGIHVLVDLNGHTLLSGISIFTHRPAPVQVAYLGY 258
Query: 298 PNTTGLPTIDYRITDSLADPPETKQKHV-EELIRLPECFLCYTPSPEAGPVC--PTPALT 354
P TTG P+IDY ++D +A P ET E+L+ LP ++ G P L+
Sbjct: 259 PKTTGYPSIDYIVSDGVATPAETSGGSFSEKLLLLPTHYIVNDHLQMLGHTIQGKRPRLS 318
Query: 355 NGF------ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLST 408
F F +F+N K+ P V W IL VP+S + + + F + +
Sbjct: 319 TFFDLDDYTFVFATFSNWQKMDPSVFSAWMEILARVPSSVMWFQ-EYFGHEGAITNLRNE 377
Query: 409 LEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468
E G+ R+ PL DH + D+ LDT G TT ++L GVP +T+ G
Sbjct: 378 AEAHGINGKRLIFSPLDPWI-DHTYRKRIADLVLDTSMKNGHTTVLDALCAGVPVITLEG 436
Query: 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCD 528
++ S L + L + + EYV++A+ LA+ L LR + D P+ D
Sbjct: 437 DQMSNRATSSALNALDLHDMTVHSIKEYVEVAVYLATHKHVLEKLRKKVEDNRLHYPLFD 496
Query: 529 GQNFALGLESTYRNMW 544
+A E + + W
Sbjct: 497 TAKYATKFEESIKAAW 512
>gi|433679021|ref|ZP_20510807.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Xanthomonas
translucens pv. translucens DSM 18974]
gi|430815863|emb|CCP41351.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Xanthomonas
translucens pv. translucens DSM 18974]
Length = 504
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 168/367 (45%), Gaps = 16/367 (4%)
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPL-VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
PL IG++S + H A + + +V ++ A+ + D I R +
Sbjct: 140 PLQIGFLSNGFGAHPTGLLTVALFERLRAHADLQVQLF-ALNRDDGSAIGARLRAAAHA- 197
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
W D+ G + +A +R+ ID+L +L G ++A +PAP+Q+ W+ YP T+G
Sbjct: 198 -WHDVAGQPHRAIAQGIRDAGIDLLFDLRGWGGGGAPEVLALRPAPLQINWLAYPGTSGA 256
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFI 358
P IDY I D+ A P + E ++RLP F PS ++ + PA L
Sbjct: 257 PWIDYVIGDAFALPDALAAHYSERVLRLPRAF---QPSDDSRRIAAPPARRDCGLPEHGT 313
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
F FNN K+TP+ + +L VP+S L + P R + ++ R
Sbjct: 314 VFCCFNNSYKLTPRSMTRMLAVLRQVPDSMLWLLSGP---GQADARLREAARRADVDPAR 370
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ +P L + D++ Y D+ LDT PY TT ++L+ G P +T G+ A V S
Sbjct: 371 LRFMP-KLAHADYLARYRHADLFLDTHPYNAHTTASDALWAGCPLLTCPGTTFAARVAGS 429
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
L +G+ + ++ + A+QL D AL LR +L+ + + + D Q FA +
Sbjct: 430 LNHHLGMDAMNVADDAAFAAKAVQLGRDPAALRVLRDTLQQRRASTGLFDMQGFAADFAA 489
Query: 539 TYRNMWH 545
R + H
Sbjct: 490 LLRGLAH 496
>gi|348516822|ref|XP_003445936.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Oreochromis niloticus]
Length = 1048
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 452 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 502
Query: 172 ------------------------------------QYTSWDNTKDPERP---LVIGYVS 192
++++ KD + L IGYVS
Sbjct: 503 PSVHPHHSMLYPLSHNFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASGGRLRIGYVS 562
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KV+ + + D+ I
Sbjct: 563 SDFGNHPTSHLMQSIPGMHNPEKFEVFCYA--LSPDDST-NFRVKVVAEAHHFTDLSQIP 619
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I ILV + G+T + + A +PAP+Q W+GYP T+G P +DY IT
Sbjct: 620 CNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGAPFMDYIIT 679
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 680 DKETSPTEVAEQYSEKLAYMPNTFF 704
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+W IL VPNS L + P + ++ + +GL
Sbjct: 842 IVYCNFNQLYKIDPPTLQMWVNILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPGS 898
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 899 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 957
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G LIA++ +Y +A++L SD+ L +R + SP+ + + + + LE
Sbjct: 958 SQLNCLGCPDLIAQSRQDYEDVAVKLGSDMEYLKMVRARVWKQRICSPLFNTKQYTMDLE 1017
Query: 538 STYRNMWHRYCKGDVP 553
Y MW + G+ P
Sbjct: 1018 RLYLQMWEHHSNGNKP 1033
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 315
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y L++ P DS N N YI E
Sbjct: 316 YNTALRLCPTHADSLNNLANIKREQGYIEEA 346
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ Y +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ +++AV+ Y+ AL +
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEAVQLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G I A+
Sbjct: 290 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEAVQL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|348516828|ref|XP_003445939.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
4 [Oreochromis niloticus]
Length = 1054
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 322 NLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 381
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 382 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 441
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 442 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 492
Query: 172 ------------------------------------QYTSWDNTKDPERP---LVIGYVS 192
++++ KD + L IGYVS
Sbjct: 493 PSVHPHHSMLYPLSHNFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASGGRLRIGYVS 552
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KV+ + + D+ I
Sbjct: 553 SDFGNHPTSHLMQSIPGMHNPEKFEVFCYA--LSPDDST-NFRVKVVAEAHHFTDLSQIP 609
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I ILV + G+T + + A +PAP+Q W+GYP T+G P +DY IT
Sbjct: 610 CNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGAPFMDYIIT 669
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 670 DKETSPTEVAEQYSEKLAYMPNTFF 694
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 290 VQVTWIGYPNTTGLPTIDYRIT---DSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP 346
+QVT G+ + GL T R+T LA K +P + T S P
Sbjct: 785 IQVTINGFTVSNGLATTQVRVTFRRTLLASSASCKLNKAATGEEVPRTIVVTTRSQYGLP 844
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFL 406
I + +FN L KI P LQ+W IL VPNS L + P + ++
Sbjct: 845 --------EDSIVYCNFNQLYKIDPPTLQMWVNILKRVPNSVLWLLRFPAVGEPNIQQYA 896
Query: 407 STLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466
+ +GL R+ P + +H++ L D+ LDT G TT + L+ G P VTM
Sbjct: 897 ---QNMGLPGSRIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTM 952
Query: 467 AGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV 526
G A V S L +G LIA++ +Y +A++L SD+ L +R + SP+
Sbjct: 953 PGETLASRVAASQLNCLGCPDLIAQSRQDYEDVAVKLGSDMEYLKMVRARVWKQRICSPL 1012
Query: 527 CDGQNFALGLESTYRNMWHRYCKGDVP 553
+ + + + LE Y MW + G+ P
Sbjct: 1013 FNTKQYTMDLERLYLQMWEHHSNGNKP 1039
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 254 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 313
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 314 PTHADSLNNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 373
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 374 YKEAIRISPTFADAYSN 390
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 186 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 245
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 246 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 305
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y L++ P DS N N YI E
Sbjct: 306 YNTALRLCPTHADSLNNLANIKREQGYIEEA 336
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 124 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ Y +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLR 240
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 241 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 273
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 60 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 119
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 120 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 179
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 180 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 223
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ +++AV+ Y+ AL +
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEAVQLYRKALEVF 347
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 348 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 407
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 408 YTRAIQINPAFADAHSN 424
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 220 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 279
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G I A+
Sbjct: 280 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEAVQL 339
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 340 YRKALEVFPEFAAAHSN 356
>gi|348516826|ref|XP_003445938.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
3 [Oreochromis niloticus]
Length = 1064
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 452 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 502
Query: 172 ------------------------------------QYTSWDNTKDPERP---LVIGYVS 192
++++ KD + L IGYVS
Sbjct: 503 PSVHPHHSMLYPLSHNFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASGGRLRIGYVS 562
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KV+ + + D+ I
Sbjct: 563 SDFGNHPTSHLMQSIPGMHNPEKFEVFCYA--LSPDDST-NFRVKVVAEAHHFTDLSQIP 619
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I ILV + G+T + + A +PAP+Q W+GYP T+G P +DY IT
Sbjct: 620 CNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGAPFMDYIIT 679
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 680 DKETSPTEVAEQYSEKLAYMPNTFF 704
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 290 VQVTWIGYPNTTGLPTIDYRIT---DSLADPPETKQKHVEELIRLPECFLCYTPSPEAGP 346
+QVT G+ + GL T R+T LA K +P + T S P
Sbjct: 795 IQVTINGFTVSNGLATTQVRVTFRRTLLASSASCKLNKAATGEEVPRTIVVTTRSQYGLP 854
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFL 406
I + +FN L KI P LQ+W IL VPNS L + P + ++
Sbjct: 855 --------EDSIVYCNFNQLYKIDPPTLQMWVNILKRVPNSVLWLLRFPAVGEPNIQQYA 906
Query: 407 STLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466
+ +GL R+ P + +H++ L D+ LDT G TT + L+ G P VTM
Sbjct: 907 ---QNMGLPGSRIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTM 962
Query: 467 AGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV 526
G A V S L +G LIA++ +Y +A++L SD+ L +R + SP+
Sbjct: 963 PGETLASRVAASQLNCLGCPDLIAQSRQDYEDVAVKLGSDMEYLKMVRARVWKQRICSPL 1022
Query: 527 CDGQNFALGLESTYRNMWHRYCKGDVP 553
+ + + + LE Y MW + G+ P
Sbjct: 1023 FNTKQYTMDLERLYLQMWEHHSNGNKP 1049
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 315
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y L++ P DS N N YI E
Sbjct: 316 YNTALRLCPTHADSLNNLANIKREQGYIEEA 346
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ Y +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ +++AV+ Y+ AL +
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEAVQLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G I A+
Sbjct: 290 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEAVQL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|411117158|ref|ZP_11389645.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Oscillatoriales cyanobacterium JSC-12]
gi|410713261|gb|EKQ70762.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Oscillatoriales cyanobacterium JSC-12]
Length = 741
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 179/390 (45%), Gaps = 9/390 (2%)
Query: 163 GKRFMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYS 222
G R +R S+ + + + L +GY+S HSV + L YHD + ++ Y
Sbjct: 354 GDRMIRYRSRPS---RDRSATKRLKVGYLSHCMGQHSVGWLARWLLKYHDREQVELYGYF 410
Query: 223 AVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGM 282
+ + + M D +A + ED +DILV+L T + +
Sbjct: 411 VTNRQGDYLHEWFQSQMDHTCRMGIDCADDAHALADCIYEDDLDILVDLDSITLDVTAEI 470
Query: 283 MACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSP 342
M +PAPVQVTW+G+ + G+PTIDY I D P + + E++ RLP+ ++
Sbjct: 471 MTLKPAPVQVTWLGW-DAAGIPTIDYFIADPYVLPDWAQDYYPEKIWRLPQTYIAVDGFE 529
Query: 343 EAGPVCPTPALT--NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-CD 399
P L + I + S K + ++ RI+ VPNS ++K F +
Sbjct: 530 VEVPNLRREDLDIPSDAIVYLSTQKGYKRHRETAKLQMRIIKNVPNSYFLIKG--FADQN 587
Query: 400 SVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM 459
S++ F E+ G+ ++ LP H + D+ LDTFPY G TTT E+L+M
Sbjct: 588 SIQAFFYQIAEEEGVNPEQLRFLPDAPSEAVHRANMMIADVVLDTFPYNGATTTLETLWM 647
Query: 460 GVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRD 519
GVP VT G A ++L VG++ IA ++EYV+ ++ D + LR
Sbjct: 648 GVPLVTRVGEQFAARNSYTMLKNVGVEAGIAWTDEEYVEWGVRFGKDEALRQQVNWQLRQ 707
Query: 520 LMSKSPVCDGQNFALGLESTYRNMWHRYCK 549
+P+ +G+ FA +E+ Y MW Y K
Sbjct: 708 SRQTAPLWNGRQFAREMENAYAQMWANYLK 737
>gi|126464807|ref|YP_001041783.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|126106622|gb|ABN79147.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides
ATCC 17029]
Length = 590
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 11/331 (3%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GY+S D+ H++S+ I L HD ++VV Y A + + R +V+
Sbjct: 234 LRLGYLSSDFCRHAMSFLIAELLERHDRSRFEVVGYCASPEDGSPE---RARVLAALDRH 290
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
I + ++ A +R D+ID+L++L G T + G++ +PAPVQ T++GY LP
Sbjct: 291 VPIGPLSDEAAARRIRADEIDLLIDLNGLTRGARPGILRWKPAPVQATYLGYIGPVPLPE 350
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC--PTPALTNGFITFGSF 363
+D+ I D + P + +RL C+ P P L F
Sbjct: 351 LDWLICDRVTVPEAEAAHYRPAPLRLEGCYQANDGQRPLLPAVDRPGEGLPEAAFVFACA 410
Query: 364 NNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
++ KIT + W RI+ AVP S L +V P ++ R+ + GL+ R+
Sbjct: 411 SHFYKITEPLFAAWCRIVAAVPGSVLWLVADTPEGQAALAGRW----QAAGLDPHRLIFA 466
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P + + +L D+ LDT PY T ++L MG+P +T+AG + + SLLT
Sbjct: 467 PRVDPAR-YRARLALADLFLDTMPYNAGTIASDALRMGLPVLTLAGRTFSGRMAASLLTA 525
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANL 513
VGL+ IA + + YV A+ +A+D A L
Sbjct: 526 VGLEDCIAPDLEAYVARAVAIATDPAAAPAL 556
>gi|427794599|gb|JAA62751.1| Putative o-linked n-acetylglucosamine transferase ogt, partial
[Rhipicephalus pulchellus]
Length = 1026
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 167/375 (44%), Gaps = 42/375 (11%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NL E + A Y A P A A +NL + + + L +A+ Y+ A+
Sbjct: 323 LNNLANIKREQGFVEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLAEALLHYREAIR 382
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P F+ + +N+G G + A + +AI NP +A+A++NL +++D+G+I AI
Sbjct: 383 ISPTFADAYSNMGNTLKEMGDVQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAI 442
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYIN-----EG-----------------------HD 152
+Y LK+ P+ +A N + + EG H
Sbjct: 443 ASYRTALKLKPEFPDAYCNLAHCLQIVCDWTDYEGRMKKLVAIVAEQLEKNRLPSVHPHH 502
Query: 153 DKLFEAHRDWGKRFMRLYS----------QYTSWDNTKDPERPLVIGYVSPDYFTHSVSY 202
L+ ++ K ++ + + + + L IGYVS D+ H S+
Sbjct: 503 SMLYPLSHEFRKAIAARHANLCLEKIQVLHRAPYQHPRQRQGRLRIGYVSSDFGNHPTSH 562
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMVR 261
+++ +HD +V Y+ + D T FR K+ + + D+ I K A +
Sbjct: 563 LMQSVPGFHDKTRVEVFCYA--LSPDDGT-SFRSKIATEAEHFIDLSQIPCNGKAADRIH 619
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D I ILV + G+T + + A +PAPVQ W+GYP T+G P +DY +TD + PP
Sbjct: 620 ADGIHILVNMNGYTKGARNEIFALRPAPVQAMWLGYPGTSGAPFMDYLVTDRITSPPHLT 679
Query: 322 QKHVEELIRLPECFL 336
++ E+L +P F
Sbjct: 680 SQYSEKLAYMPHTFF 694
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L K+ P L++W IL VPNS L + P ++ + + GL
Sbjct: 829 VVYCNFNQLYKLDPATLRMWVNILQRVPNSVLWLLRFPAVGEA---HVQAWAQAEGLTQP 885
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
+ + +H++ L D+ LDT G TT + L+ G P VT G A V
Sbjct: 886 GRIIFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPVVTWPGETLASRVAA 945
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G+ L+A++ EY +A++L +D L +R + +SP+ + + + LE
Sbjct: 946 SQLHCLGVPELVARSRREYQDIAVRLGTDRDYLKAIRAKVWAARMESPLFNVRTYTSNLE 1005
Query: 538 STYRNMWHRY 547
+ + MW Y
Sbjct: 1006 NLFLKMWANY 1015
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+A+ Y A P+ +A NL K++ + +A +CYQ AL +
Sbjct: 257 NLACVYYEQGLIDLAVDTYRRAIDLQPNFPDAYCNLANALKEKSQVTEAEDCYQTALRLC 316
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G ++ A+
Sbjct: 317 PTHADSLNNLANIKREQGFVEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLAEALLH 376
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I P +A N
Sbjct: 377 YREAIRISPTFADAYSN 393
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E + A Y+ A P A++ NNL I +++ +++A Y AL +
Sbjct: 291 NLANALKEKSQVTEAEDCYQTALRLCPTHADSLNNLANIKREQGFVEEATRLYLKALEVF 350
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A +AI +PT+A+AY+N+G ++ G + A+
Sbjct: 351 PEFAAAHSNLASVLQQQGKLAEALLHYREAIRISPTFADAYSNMGNTLKEMGDVQGALQC 410
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + ++I+P +A N LA + + G+ + ++R
Sbjct: 411 YSRAIQINPAFADAHSN--LASIHKDSGNIPEAIASYR 446
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 189 NLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLS 248
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ ++ A D
Sbjct: 249 PNNAVVHGNLACVYYEQGLIDLAVDTYRRAIDLQPNFPDAYCNLANALKEKSQVTEAEDC 308
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y+ L++ P DS N N ++ E
Sbjct: 309 YQTALRLCPTHADSLNNLANIKREQGFVEEA 339
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + +P+ A NL +Y ++ +D AV+ Y+ A+ ++
Sbjct: 223 NLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAVDTYRRAIDLQ 282
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL + ++ A + + A+ PT+A++ NNL + R+ G + A
Sbjct: 283 PNFPDAYCNLANALKEKSQVTEAEDCYQTALRLCPTHADSLNNLANIKREQGFVEEATRL 342
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 343 YLKALEVFPEFAAAHSN 359
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P C+ C ++ +++ L +A CY A+ P F+ + +NLG V+ QG++ A
Sbjct: 150 PECSFLCFSVNIVF-GLWVLQQA--CYLKAIETCPTFAVAWSNLGCVFNAQGEIWLAIHH 206
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148
EKA+A +P + +AY NLG + ++A A+ AY + L + P+ NA + LA Y
Sbjct: 207 FEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPN--NAVVHGNLACVYYE 264
Query: 149 EGHDDKLFEAHR 160
+G D + +R
Sbjct: 265 QGLIDLAVDTYR 276
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 11 MLKFDMAIVF---------YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
L F + IVF Y A P A A +NLG ++ + + A+ ++ A+++
Sbjct: 154 FLCFSVNIVFGLWVLQQACYLKAIETCPTFAVAWSNLGCVFNAQGEIWLAIHHFEKAVAL 213
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
PNF + NLG V D A +A+ +P A + NL +Y + G I LA+D
Sbjct: 214 DPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAVD 273
Query: 122 AYEQCLKIDPD 132
Y + + + P+
Sbjct: 274 TYRRAIDLQPN 284
>gi|125654622|ref|YP_001033816.1| O-linked acetylglucosamine transferase [Rhodobacter sphaeroides
2.4.1]
gi|77386282|gb|ABA81711.1| predicted O-linked acetylglucosamine transferase [Rhodobacter
sphaeroides 2.4.1]
Length = 590
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 11/331 (3%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GY+S D+ H++S+ I L HD ++VV Y A + + R +V+
Sbjct: 234 LRLGYLSSDFCRHAMSFLIAELLERHDRSRFEVVGYCASPEDGSPE---RARVLAALDRH 290
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
I + ++ A +R D+ID+L++L G T + G++ +PAPVQ T++GY LP
Sbjct: 291 VPIGPLSDEAAARRIRADEIDLLIDLNGLTRGARPGILRWKPAPVQATYLGYIGPVPLPE 350
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC--PTPALTNGFITFGSF 363
+D+ I D + P + +RL C+ P P L F
Sbjct: 351 LDWLICDRVTVPEAEAAHYRPAPLRLEGCYQANDGQRPLLPAVDRPGEGLPEAAFVFACA 410
Query: 364 NNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
++ KIT + W RI+ AVP S L +V P ++ R+ + GL+ R+
Sbjct: 411 SHFYKITEPLFAAWCRIVAAVPGSVLWLVADTPEGQAALAGRW----QAAGLDPHRLIFA 466
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P + + +L D+ LDT PY T ++L MG+P +T+AG + + SLLT
Sbjct: 467 PRVDPAR-YRARLALADLFLDTMPYNAGTIASDALRMGLPLLTLAGRTFSGRMAASLLTA 525
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANL 513
VGL+ IA + + YV A+ +A+D A L
Sbjct: 526 VGLEDCIAPDLEAYVARAVAIATDPAAAPAL 556
>gi|348516824|ref|XP_003445937.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Oreochromis niloticus]
Length = 1038
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 322 NLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 381
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 382 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 441
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 442 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 492
Query: 172 ------------------------------------QYTSWDNTKDPERP---LVIGYVS 192
++++ KD + L IGYVS
Sbjct: 493 PSVHPHHSMLYPLSHNFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASGGRLRIGYVS 552
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KV+ + + D+ I
Sbjct: 553 SDFGNHPTSHLMQSIPGMHNPEKFEVFCYA--LSPDDST-NFRVKVVAEAHHFTDLSQIP 609
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I ILV + G+T + + A +PAP+Q W+GYP T+G P +DY IT
Sbjct: 610 CNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGAPFMDYIIT 669
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 670 DKETSPTEVAEQYSEKLAYMPNTFF 694
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+W IL VPNS L + P + ++ + +GL
Sbjct: 832 IVYCNFNQLYKIDPPTLQMWVNILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPGS 888
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 889 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 947
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G LIA++ +Y +A++L SD+ L +R + SP+ + + + + LE
Sbjct: 948 SQLNCLGCPDLIAQSRQDYEDVAVKLGSDMEYLKMVRARVWKQRICSPLFNTKQYTMDLE 1007
Query: 538 STYRNMWHRYCKGDVP 553
Y MW + G+ P
Sbjct: 1008 RLYLQMWEHHSNGNKP 1023
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 254 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 313
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 314 PTHADSLNNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 373
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 374 YKEAIRISPTFADAYSN 390
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 186 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 245
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 246 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 305
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y L++ P DS N N YI E
Sbjct: 306 YNTALRLCPTHADSLNNLANIKREQGYIEEA 336
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 60 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 119
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 120 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 179
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 180 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 223
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 124 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ Y +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLR 240
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 241 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 273
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ +++AV+ Y+ AL +
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEAVQLYRKALEVF 347
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 348 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 407
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 408 YTRAIQINPAFADAHSN 424
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 220 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 279
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G I A+
Sbjct: 280 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEAVQL 339
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 340 YRKALEVFPEFAAAHSN 356
>gi|58583232|ref|YP_202248.1| hypothetical protein XOO3609 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84625068|ref|YP_452440.1| hypothetical protein XOO_3411 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|58427826|gb|AAW76863.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84369008|dbj|BAE70166.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 568
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 168/368 (45%), Gaps = 18/368 (4%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPL--VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
L +G+VS + H A + H + +V ++ A D IR R + +G
Sbjct: 206 LQLGFVSNGFGAHPTGLLTVAVFEALQHRQPDMQVHLF-ATSHDDGSEIRAR---LAQGT 261
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
D+ + A +R+ ID+L +L G + + A +PAP+Q+ W+ YP T+G
Sbjct: 262 RVHDVTALGHLATAQHIRDQGIDLLFDLRGWGGGGRPEVFALRPAPIQINWLAYPGTSGA 321
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN-GFITFGS 362
P +DY + D++ PP + + E+++RLP F PS + V P+ G G+
Sbjct: 322 PWMDYVLGDAVGLPPSLEPFYSEQVLRLPRVF---QPSDTSRIVAEPPSRAECGLPELGA 378
Query: 363 ----FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
FNN K+ P+ + +L AVP L + P ++ F T G+E R
Sbjct: 379 VLCCFNNSYKLNPRSMARMLAVLRAVPGCVLWLLSGPGEANARLRAFAQT---QGVEPQR 435
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ +P L + ++ Y D+ LDT PY TT ++L+ G P +T G A V S
Sbjct: 436 LVFMP-KLPHPRYLARYRHADLFLDTHPYNAHTTASDALWAGCPVLTTPGETFAARVAGS 494
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
L +GL + ++ +V A+ LASD AL +R L + S V D FA L +
Sbjct: 495 LNQHLGLDEMNVVDDAAFVAKAIALASDSNALRGVRARLAEQRLHSGVFDMDGFADDLAA 554
Query: 539 TYRNMWHR 546
R + R
Sbjct: 555 LLRGVARR 562
>gi|328700630|ref|XP_001950113.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Acyrthosiphon pisum]
Length = 1045
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 168/384 (43%), Gaps = 62/384 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A Y A P A A +NL + + + L +A+ YQ A+ I+
Sbjct: 334 NLANIKREQGYIEEATGLYLKALEVFPEFAAAHSNLASVLQQQGKLTEALNHYQEAIRIQ 393
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 394 PTFADAYSNMGNTLKEMQDIQNALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 453
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y L++ PD +A Y N H ++ D+ R +L S
Sbjct: 454 YRTALRLKPDFPDA---------YCNLAHCLQIVCDWTDYESRMKKLVSIVAEQLEKNRL 504
Query: 172 ------------------------------------QYTSWDNTKD--PERPLVIGYVSP 193
++ TKD P L IGYVS
Sbjct: 505 PSVHPHHSMLYPLSHNFRKAIAGRHAALCLEKIQVLHKPPYNYTKDLAPGNRLRIGYVSS 564
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID- 252
D+ H S+ +++ H+ + KV ++ + D T FR K+ ++ + D+ I
Sbjct: 565 DFGNHPTSHLMQSIPGLHNKE--KVEIFCYALSTD-DTTTFRSKIAREAEHFIDLSNIPC 621
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD 312
K A + D I ILV + G+T + + A +PAP+QV W+GYP T+G P +DY ITD
Sbjct: 622 NGKAADKINSDGIHILVNMNGYTKGARNEIFALRPAPIQVMWLGYPGTSGAPFMDYLITD 681
Query: 313 SLADPPETKQKHVEELIRLPECFL 336
+ P E ++ E+L +P +
Sbjct: 682 MVTSPIELASQYSEKLAYMPHTYF 705
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
+L + + +FN L KI P L +W IL AVPNS L + P ++ ST
Sbjct: 839 SLPEDAVVYCNFNQLYKIDPNTLLMWVNILKAVPNSVLWLLRFPAVGET---HIQSTAAS 895
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
LG+E R+ L + +H++ L D+ LDT G TT+ + L+ G P VT+ G
Sbjct: 896 LGIEPGRI-LFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETL 954
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A V S L +G LIA+ +EY +A++L +D L +R + S+SP+ +
Sbjct: 955 ASRVAASQLATLGCPELIARTREEYQDIAIRLGTDKEYLKTMRAEVWRARSESPLFNCSI 1014
Query: 532 FALGLESTYRNMWHRYCKGDVP 553
+ GLE YR MW +Y G+ P
Sbjct: 1015 YTNGLERLYRAMWDKYHNGEKP 1036
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ + A ECY AL +
Sbjct: 266 NLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVDAEECYNTALKLC 325
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G ++ A++
Sbjct: 326 PTHADSLNNLANIKREQGYIEEATGLYLKALEVFPEFAAAHSNLASVLQQQGKLTEALNH 385
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 386 YQEAIRIQPTFADAYSN 402
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K LD+A CY A+ +P+F
Sbjct: 136 VAAGDM---EQAVQAYVTALQYNPELYCVRSDLGNLLKALGRLDEAKSCYLKAIETRPDF 192
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ ++ A EKA+A +P + +AY NLG + +++ ++ AY +
Sbjct: 193 AVAWSNLGCVFNSLNEIWLAIHHFEKAVALDPNFLDAYINLGNVLKESRIFDRSVSAYLR 252
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P NA + LA Y +G D + +R
Sbjct: 253 ALALSPT--NAVVHGNLACVYYEQGLIDLAIDTYR 285
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + + +AI +E A +P+ +A NLG + K+ D++V Y AL++
Sbjct: 198 NLGCVFNSLNEIWLAIHHFEKAVALDPNFLDAYINLGNVLKESRIFDRSVSAYLRALALS 257
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + NL VY QG +D A + +AI P + +AY NL ++ G + A +
Sbjct: 258 PTNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVDAEEC 317
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y LK+ P DS N N YI E
Sbjct: 318 YNTALKLCPTHADSLNNLANIKREQGYIEEA 348
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E + A Y A P A++ NNL I +++ +++A Y AL +
Sbjct: 300 NLANALKEKGQVVDAEECYNTALKLCPTHADSLNNLANIKREQGYIEEATGLYLKALEVF 359
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI PT+A+AY+N+G ++ I A+
Sbjct: 360 PEFAAAHSNLASVLQQQGKLTEALNHYQEAIRIQPTFADAYSNMGNTLKEMQDIQNALQC 419
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 420 YSRAIQINPAFADAHSN 436
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F +A NP AEA +NLG ++K+R L A++ Y+ A+ +KP+F NL
Sbjct: 72 RLDKSAQFSSMAIKHNPLLAEAYSNLGNVFKERGQLQDALDNYRHAVRLKPDFIDGYINL 131
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G M+ A + A+ NP ++LG L + G + A Y + ++ PD
Sbjct: 132 AAALVAAGDMEQAVQAYVTALQYNPELYCVRSDLGNLLKALGRLDEAKSCYLKAIETRPD 191
Query: 133 SRNAGQNRLLAMNYINE 149
A N N +NE
Sbjct: 192 FAVAWSNLGCVFNSLNE 208
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD ++ Y A +P A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 232 NLGNVLKESRIFDRSVSAYLRALALSPTNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 291
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G++ A E A+ PT+A++ NNL + R+ G I A
Sbjct: 292 PNFPDAYCNLANALKEKGQVVDAEECYNTALKLCPTHADSLNNLANIKREQGYIEEATGL 351
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 352 YLKALEVFPEFAAAHSN 368
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 65 FSQSLNNLGVVYTVQG------KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
+ Q NN GV+ + ++D +A+ AI NP AEAY+NLG ++++ G +
Sbjct: 50 WRQEPNNTGVLLLLSSIHFQCRRLDKSAQFSSMAIKHNPLLAEAYSNLGNVFKERGQLQD 109
Query: 119 AIDAYEQCLKIDPD 132
A+D Y +++ PD
Sbjct: 110 ALDNYRHAVRLKPD 123
>gi|190340092|gb|AAI63923.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Danio rerio]
Length = 1046
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 167/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 452 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 502
Query: 172 ---------------------------------------QYTSWDNTKDPERPLVIGYVS 192
Y + K L +GY+S
Sbjct: 503 PSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASSGRLRVGYIS 562
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KVM + + D+ I
Sbjct: 563 SDFGNHPTSHLMQSIPGMHNSEKFEVFCYA--LSPDDGT-NFRVKVMAEAHHFIDLSQIP 619
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I ILV + G+T + + A +PAP+Q W+GYP T+G P +DY ++
Sbjct: 620 CNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGAPFMDYIVS 679
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 680 DKATSPIEVAEQYSEKLAYMPNTFF 704
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS + + P + ++ + LGL +
Sbjct: 840 IVYCNFNQLYKIDPPTLQMWANILKRVPNSVIWLLRFPAVGEPNIQQYA---QNLGLPAS 896
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 897 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 955
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIA++ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 956 SQLTCLGCPELIAQSRQEYEDVAVKLGTDMEFLKKVRARVWKQRICSPLFNTKQYTMDLE 1015
Query: 538 STYRNMWHRYCKGDVPS-LKRMEMLQ 562
Y MW + G P L +M+ L+
Sbjct: 1016 KLYLQMWENHASGGKPDHLVKMQSLE 1041
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV+ Y+ AL +
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ Y +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|188575464|ref|YP_001912393.1| hypothetical protein PXO_04549 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188519916|gb|ACD57861.1| tetratricopeptide repeat domain protein [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 568
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 169/368 (45%), Gaps = 18/368 (4%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPL--VYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGG 243
L +G+VS + H A + H + +V ++ A D IR R + +G
Sbjct: 206 LQLGFVSNGFGAHPTGLLTVAVFEALQHRQPDMQVHLF-ATSHDDGSEIRAR---LAQGT 261
Query: 244 IWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGL 303
D+ + A +R+ ID+L +L G + + A +PAP+Q+ W+ YP T+G
Sbjct: 262 RVHDVTALGHLATAQHIRDQGIDLLFDLRGWGGGGRPEVFALRPAPIQINWLAYPGTSGA 321
Query: 304 PTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN-GFITFGS 362
P +DY + D++ PP + + E+++RLP F PS + V P+ G G+
Sbjct: 322 PWMDYVLGDAVGLPPSLEPFYSEQVLRLPRVF---QPSDTSRIVAEPPSRAECGLPELGA 378
Query: 363 ----FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLR 418
FNN K+ P+ + +L AVP L + P ++ F T G++ R
Sbjct: 379 VLCCFNNSYKLNPRSMARMLAVLRAVPGCVLWLLSGPGEANARLRAFAQT---QGVDPQR 435
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ +P L + ++ Y D+ LDT PY TT ++L+ G P +T G A V S
Sbjct: 436 LVFMP-KLPHPRYLARYRHADLFLDTHPYNAHTTASDALWAGCPVLTTPGETFAARVAGS 494
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538
L +GL + ++ +V A+ LASD AL +R L + +S V D FA L +
Sbjct: 495 LNQHLGLDEMNVVDDAAFVAKAIALASDSNALRGVRARLAEQRLRSGVFDMDGFADDLAA 554
Query: 539 TYRNMWHR 546
R + R
Sbjct: 555 LLRGVARR 562
>gi|308501583|ref|XP_003112976.1| CRE-OGT-1 protein [Caenorhabditis remanei]
gi|308265277|gb|EFP09230.1| CRE-OGT-1 protein [Caenorhabditis remanei]
Length = 1255
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 169/380 (44%), Gaps = 50/380 (13%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E K + A Y A P A A +NL I + + L A+ Y+ A+ I
Sbjct: 522 NLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLQDAILHYKEAIRIS 581
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G G AA +AI NP +A+A++NL +++DAG+++ AI +
Sbjct: 582 PTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFADAHSNLASIHKDAGNMAEAIQS 641
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD-----DKLFEAHRD-WGKR----------- 165
Y LK+ P+ +A N + I + HD KL + D GK+
Sbjct: 642 YSTALKLKPEFPDAFCNLAHCLQIICDWHDYDRRVRKLVQIVEDQLGKKRLPSVHPHHSM 701
Query: 166 --------------------FMRLYSQ--------YTSWDNTKDPERPLVIGYVSPDYFT 197
F +++ Q + + K +R L IGYVS D+
Sbjct: 702 LYPLSHATRIAIASKHASLCFDKVHVQMLGKTPLIHADRFSIKKGQR-LRIGYVSSDFGN 760
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKV 256
H S+ +++ HD +V Y+ V FR K+M + + D+ + K
Sbjct: 761 HPTSHLMQSIPGMHDRNRVEVFCYALSVN---DGTNFRSKLMAESEHFVDLSQVPCNGKA 817
Query: 257 AAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLAD 316
A + D I IL+ + G+T + + A +PAP+QV W+GYP+T+G +DY ITD++
Sbjct: 818 AEKIAHDGIHILINMNGYTKGARNEIFALRPAPIQVMWLGYPSTSGATFMDYIITDAVTT 877
Query: 317 PPETKQKHVEELIRLPECFL 336
P E+L +P F
Sbjct: 878 PLRLACAFTEKLAYMPHTFF 897
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL 412
L + I F +FN L KI P L +W +IL VP S L + P+ + ++ +
Sbjct: 1046 LPDDAIVFCNFNQLYKIDPSTLDMWIKILENVPKSILWLLRFPYQGEEHIRKYCV---ER 1102
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
GLE R+ + + +H++ L D+ LDT G TT + L+ G P VTM A
Sbjct: 1103 GLEPSRI-VFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTGMDILWTGTPMVTMPLESLA 1161
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
V S L +G+ L+AK + EYV +A +L +D LA +R + + S + D + +
Sbjct: 1162 SRVATSQLYALGVPELVAKTKAEYVDIATRLGNDADHLAAMRAKVWMARTTSTLFDVKQY 1221
Query: 533 ALGLESTYRNMWHRYCKG 550
+E MW RY G
Sbjct: 1222 CHDMEDLLDLMWKRYESG 1239
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 11 MLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLN 70
+LK D F P A++ NNL I +++ ++ A Y AL I P F+ + +
Sbjct: 496 LLKKDNTTFPAMFCFQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHS 555
Query: 71 NLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130
NL + QGK+ A ++AI +PT+A+AY+N+G ++ G S AI Y + ++I+
Sbjct: 556 NLASILQQQGKLQDAILHYKEAIRISPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQIN 615
Query: 131 PDSRNAGQN 139
P +A N
Sbjct: 616 PAFADAHSN 624
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 60/180 (33%)
Query: 23 LAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKM 82
LA N CAEA +NLG YK++ +L +A+E Y+MA+ +KP F + NL G +
Sbjct: 224 LAIKVNNQCAEAYSNLGNYYKEKGHLAEALENYKMAVKLKPEFIDAYINLAAALVSGGDL 283
Query: 83 DAAAEM---------------------------IEKA----------------------- 92
+ A +E+A
Sbjct: 284 EQAVTAYFNALQINPDLYCVRSDLGNLLKAMGRLEEAKVNQNKFIWSNTKIFFLQVCYLK 343
Query: 93 -IAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
I P +A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 344 AIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 394
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKA----------- 51
NL A + A+ Y A NP ++LG + K L++A
Sbjct: 272 NLAAALVSGGDLEQAVTAYFNALQINPDLYCVRSDLGNLLKAMGRLEEAKVNQNKFIWSN 331
Query: 52 ------VECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105
CY A+ +P F+ + +NLG V+ QG++ A EKA+ +P + +AY N
Sbjct: 332 TKIFFLQVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDAYIN 391
Query: 106 LGVLYRDAGSISLAIDAYEQCLKI 129
LG + ++A A+ AY + L +
Sbjct: 392 LGNVLKEARIFDRAVSAYLRALNL 415
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV 78
V Y A P A A +NLG ++ + + A+ ++ A+++ PNF + NLG V
Sbjct: 339 VCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKE 398
Query: 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
D A +A+ + +A + NL +Y + G + LAID Y++
Sbjct: 399 ARIFDRAVSAYLRALNLSGNHAVVHGNLACVYYEQGLLDLAIDTYKK 445
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
L I NL+K+++ +A+ + +++ +NLG Y +G + A E + A+ P
Sbjct: 205 LSAINFQTKNLEKSMQYSMLAIKVNNQCAEAYSNLGNYYKEKGHLAEALENYKMAVKLKP 264
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD---SRNAGQNRLLAMNYINEG 150
+ +AY NL G + A+ AY L+I+PD R+ N L AM + E
Sbjct: 265 EFIDAYINLAAALVSGGDLEQAVTAYFNALQINPDLYCVRSDLGNLLKAMGRLEEA 320
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 357 NLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVSAYLRALNLS 416
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
N + NL VY QG +D A + +K
Sbjct: 417 GNHAVVHGNLACVYYEQGLLDLAIDTYKK 445
>gi|332561307|ref|ZP_08415622.1| O-linked acetylglucosamine transferase [Rhodobacter sphaeroides
WS8N]
gi|332274106|gb|EGJ19423.1| O-linked acetylglucosamine transferase [Rhodobacter sphaeroides
WS8N]
Length = 590
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 11/331 (3%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GY+S D+ H++S+ I L HD ++VV Y A + + R +V+
Sbjct: 234 LRLGYLSSDFCRHAMSFLIAELLERHDRSRFEVVGYCASPEDGSPE---RARVLAALDRH 290
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
I + ++ A +R D+ID+L++L G T + G++ +PAPVQ T++GY LP
Sbjct: 291 VPIGPLSDEAAARRIRADEIDLLIDLNGLTRGARPGILRWKPAPVQATYLGYIGPVPLPE 350
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC--PTPALTNGFITFGSF 363
+D+ I D + P + +RL C+ P P L F
Sbjct: 351 LDWLICDRVTVPGAEAAHYRPAPLRLEGCYQANDGQRPLLPSVDRPGEGLPEAAFVFACA 410
Query: 364 NNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
++ KIT + W RI+ AVP S L +V P ++ R+ + GL+ R+
Sbjct: 411 SHFYKITEPLFAAWCRIVAAVPGSVLWLVADTPEGQAALAGRW----QAAGLDPHRLIFA 466
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P + + +L D+ LDT PY T ++L MG+P +T+AG + + SLLT
Sbjct: 467 PRVDPAR-YRARLALADLFLDTMPYNAGTIASDALRMGLPVLTLAGRTFSGRMAASLLTA 525
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANL 513
VGL+ IA + + YV A+ +A+D A L
Sbjct: 526 VGLEDCIAPDLEAYVARAVAIATDPAAAPAL 556
>gi|94272257|ref|ZP_01292095.1| Glycosyl transferase, family 2 [delta proteobacterium MLMS-1]
gi|93450186|gb|EAT01491.1| Glycosyl transferase, family 2 [delta proteobacterium MLMS-1]
Length = 743
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 160/356 (44%), Gaps = 11/356 (3%)
Query: 188 IGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRD 247
+GY+S D+ H S I L HD ++ +Y + R E + R
Sbjct: 3 LGYLSSDFREHPTSRLILGLLAGHDKNRVELFMYCCGWDDGSALRRAVETHFEHK---RS 59
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
I + + A ++R D+ID+L++L G T N+L +MA +PA VQV+++G+P + G +D
Sbjct: 60 IAAMSDGAAAELIRADRIDVLIDLNGPTLFNRLAIMAYRPAAVQVSYLGFPGSVGGRVVD 119
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN----GFITFGSF 363
Y + D P ++ + E +IRL + + PV P A + G F
Sbjct: 120 YIVADHHTVPEGEEKHYPERIIRLVGTYQPNAFRFQQRPVVPARAELGLPGEDVLIVGMF 179
Query: 364 NNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP 423
N + K+ +V W IL P + L V P + R L + + R+ P
Sbjct: 180 NKINKVRGEVWAAWMSILKLAPKAWLWV-LDPGL--AARANLLKAAREHQVAEKRILFAP 236
Query: 424 LILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV 483
L H+ D+ LD +PY G T+T ++L+ GVP +T+ G A V LL
Sbjct: 237 -ALPQAGHLSRLGACDLMLDPWPYGGHTSTTDALFAGVPVITLEGRNFAGRVSAGLLKSA 295
Query: 484 GLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
L L+ + +Y+Q A L ++ L L+ +R+ + S + Q A LES
Sbjct: 296 NLPALVRGSVQDYIQTAAGLLNNRQELQRLQRFVREKVPHSLLFANQGQARQLESA 351
>gi|328700632|ref|XP_003241333.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Acyrthosiphon pisum]
Length = 1090
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 168/384 (43%), Gaps = 62/384 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A Y A P A A +NL + + + L +A+ YQ A+ I+
Sbjct: 379 NLANIKREQGYIEEATGLYLKALEVFPEFAAAHSNLASVLQQQGKLTEALNHYQEAIRIQ 438
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 439 PTFADAYSNMGNTLKEMQDIQNALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 498
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y L++ PD +A Y N H ++ D+ R +L S
Sbjct: 499 YRTALRLKPDFPDA---------YCNLAHCLQIVCDWTDYESRMKKLVSIVAEQLEKNRL 549
Query: 172 ------------------------------------QYTSWDNTKD--PERPLVIGYVSP 193
++ TKD P L IGYVS
Sbjct: 550 PSVHPHHSMLYPLSHNFRKAIAGRHAALCLEKIQVLHKPPYNYTKDLAPGNRLRIGYVSS 609
Query: 194 DYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID- 252
D+ H S+ +++ H+ + KV ++ + D T FR K+ ++ + D+ I
Sbjct: 610 DFGNHPTSHLMQSIPGLHNKE--KVEIFCYALSTD-DTTTFRSKIAREAEHFIDLSNIPC 666
Query: 253 EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITD 312
K A + D I ILV + G+T + + A +PAP+QV W+GYP T+G P +DY ITD
Sbjct: 667 NGKAADKINSDGIHILVNMNGYTKGARNEIFALRPAPIQVMWLGYPGTSGAPFMDYLITD 726
Query: 313 SLADPPETKQKHVEELIRLPECFL 336
+ P E ++ E+L +P +
Sbjct: 727 MVTSPIELASQYSEKLAYMPHTYF 750
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P L +W IL AVPNS L + P ++ ST LG+E
Sbjct: 890 VVYCNFNQLYKIDPNTLLMWVNILKAVPNSVLWLLRFPAVGET---HIQSTAASLGIEPG 946
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ L + +H++ L D+ LDT G TT+ + L+ G P VT+ G A V
Sbjct: 947 RI-LFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 1005
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G LIA+ +EY +A++L +D L +R + S+SP+ + + GLE
Sbjct: 1006 SQLATLGCPELIARTREEYQDIAIRLGTDKEYLKTMRAEVWRARSESPLFNCSIYTNGLE 1065
Query: 538 STYRNMWHRYCKGDVP 553
YR MW +Y G+ P
Sbjct: 1066 RLYRAMWDKYHNGEKP 1081
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ + A ECY AL +
Sbjct: 311 NLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVDAEECYNTALKLC 370
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G ++ A++
Sbjct: 371 PTHADSLNNLANIKREQGYIEEATGLYLKALEVFPEFAAAHSNLASVLQQQGKLTEALNH 430
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 431 YQEAIRIQPTFADAYSN 447
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K LD+A CY A+ +P+F
Sbjct: 181 VAAGDM---EQAVQAYVTALQYNPELYCVRSDLGNLLKALGRLDEAKSCYLKAIETRPDF 237
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ ++ A EKA+A +P + +AY NLG + +++ ++ AY +
Sbjct: 238 AVAWSNLGCVFNSLNEIWLAIHHFEKAVALDPNFLDAYINLGNVLKESRIFDRSVSAYLR 297
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P NA + LA Y +G D + +R
Sbjct: 298 ALALSP--TNAVVHGNLACVYYEQGLIDLAIDTYR 330
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + + +AI +E A +P+ +A NLG + K+ D++V Y AL++
Sbjct: 243 NLGCVFNSLNEIWLAIHHFEKAVALDPNFLDAYINLGNVLKESRIFDRSVSAYLRALALS 302
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + NL VY QG +D A + +AI P + +AY NL ++ G + A +
Sbjct: 303 PTNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVDAEEC 362
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y LK+ P DS N N YI E
Sbjct: 363 YNTALKLCPTHADSLNNLANIKREQGYIEEA 393
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A++ NNL I +++ +++A Y AL + P F+ + +NL V QG
Sbjct: 363 YNTALKLCPTHADSLNNLANIKREQGYIEEATGLYLKALEVFPEFAAAHSNLASVLQQQG 422
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
K+ A ++AI PT+A+AY+N+G ++ I A+ Y + ++I+P +A N
Sbjct: 423 KLTEALNHYQEAIRIQPTFADAYSNMGNTLKEMQDIQNALQCYSRAIQINPAFADAHSN 481
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F +A NP AEA +NLG ++K+R L A++ Y+ A+ +KP+F NL
Sbjct: 117 RLDKSAQFSSMAIKHNPLLAEAYSNLGNVFKERGQLQDALDNYRHAVRLKPDFIDGYINL 176
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G M+ A + A+ NP ++LG L + G + A Y + ++ PD
Sbjct: 177 AAALVAAGDMEQAVQAYVTALQYNPELYCVRSDLGNLLKALGRLDEAKSCYLKAIETRPD 236
Query: 133 SRNAGQNRLLAMNYINE 149
A N N +NE
Sbjct: 237 FAVAWSNLGCVFNSLNE 253
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD ++ Y A +P A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 277 NLGNVLKESRIFDRSVSAYLRALALSPTNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 336
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G++ A E A+ PT+A++ NNL + R+ G I A
Sbjct: 337 PNFPDAYCNLANALKEKGQVVDAEECYNTALKLCPTHADSLNNLANIKREQGYIEEATGL 396
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 397 YLKALEVFPEFAAAHSN 413
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 65 FSQSLNNLGVVYTVQG------KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL 118
+ Q NN GV+ + ++D +A+ AI NP AEAY+NLG ++++ G +
Sbjct: 95 WRQEPNNTGVLLLLSSIHFQCRRLDKSAQFSSMAIKHNPLLAEAYSNLGNVFKERGQLQD 154
Query: 119 AIDAYEQCLKIDPD 132
A+D Y +++ PD
Sbjct: 155 ALDNYRHAVRLKPD 168
>gi|254464640|ref|ZP_05078051.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110kDa subunit [Rhodobacterales bacterium Y4I]
gi|206685548|gb|EDZ46030.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110kDa subunit [Rhodobacterales bacterium Y4I]
Length = 287
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 12/288 (4%)
Query: 271 LTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIR 330
+ G+T N+L + + APV V ++GYP TTGL T+DY + D++ P + ++ E+++
Sbjct: 1 MKGYTKGNRLNLFNSRLAPVHVAYLGYPGTTGLETMDYMVADTVTVPEKHRKHFSEKIMY 60
Query: 331 LPECFLCYTPSPEAGPVCPTPA-----LTNGFITFGSFNNLAKITPKVLQVWARILCAVP 385
+P+C Y P+ P+ L F SFN+ K++P+ +W ++L VP
Sbjct: 61 MPDC---YQPNDNKRTASRVPSRAEAGLPEDAFVFCSFNSPYKVSPEEFDIWMKLLKLVP 117
Query: 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445
+S L + L ++ G+ + R+ + DH+ L D+ LDTF
Sbjct: 118 DSVLWFYAP---RAETKANILKEAKKRGVAADRI-VFAGFAGQEDHLARLQLADVFLDTF 173
Query: 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505
TT ++L+ GVP VT G A S+L GL+ L A Y LAL+LA
Sbjct: 174 AVNAHTTASDALWAGVPVVTKTGKQFAARFATSILNAAGLRELAASTPQRYQALALKLAR 233
Query: 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
+ LA+++ +++ ++ P+ D + F E+ RY G P
Sbjct: 234 NPDYLADVKARVKEGIATGPLYDTERFTRNFEALMEKALDRYNTGLEP 281
>gi|398872865|ref|ZP_10628142.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Pseudomonas sp. GM74]
gi|398201465|gb|EJM88343.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Pseudomonas sp. GM74]
Length = 611
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 168/358 (46%), Gaps = 17/358 (4%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L IG++S D+ H+VS D Q ++V + + D +R E+V + +
Sbjct: 254 LRIGFLSSDFCLHAVSLLTVELFELIDRQRFEVYGF-CWSREDGSALR--ERVRQAMDHF 310
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
I +D+ A +R +IDIL++L G T+ + + A +PA VQ+T++G+P +TGLP
Sbjct: 311 VRIDAMDDAAAAQCIRNHEIDILIDLHGLTSGARPDIPAYRPAAVQMTYLGFPGSTGLPG 370
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITF 360
IDY I D P K + E + L + + C S PV P L F
Sbjct: 371 IDYVIADRYLIPDSEKAYYSETPLYLAQIYQC---SDRQRPVAALPTRAECGLPQERFVF 427
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
SFNN K +V W RIL P+S L ++ P+ +++ R + G+ R+
Sbjct: 428 CSFNNNYKFNEEVFDCWMRILQRAPDSVLWLLADNPWAQENLCAR----AQAHGVNPARL 483
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
P + ++ YS D+ LD +P+ TT ++L+MG+P +T +G A + SL
Sbjct: 484 LFAPRV-APAQYLARYSAADLFLDAYPFNAGTTANDALWMGLPVLTRSGRTFASRMAGSL 542
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
LT + L LI EY + A++LA+ L LR L S + D F E
Sbjct: 543 LTALDLPELITTTLAEYEERAVELATQADLLPGLRERLHQGREHSALFDTPRFVRDFE 600
>gi|221634584|ref|YP_002523272.1| O-linked acetylglucosamine transferase [Rhodobacter sphaeroides
KD131]
gi|221163457|gb|ACM04419.1| O-linked acetylglucosamine transferase [Rhodobacter sphaeroides
KD131]
Length = 598
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 158/331 (47%), Gaps = 11/331 (3%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GY+S D+ H++S+ I L HD ++VV Y A + + R +V+
Sbjct: 242 LRLGYLSSDFCRHAMSFLIAELLERHDRSRFEVVGYCASPEDGSPE---RARVLAALDRH 298
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
I + ++ A +R D+ID+L++L G T + G++ +PAPVQ T++GY LP
Sbjct: 299 VPIGPLSDEAAARRIRADEIDLLIDLNGLTRGARPGILRWKPAPVQATYLGYIGPVPLPE 358
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC--PTPALTNGFITFGSF 363
+D+ I D + P + +RL C+ P P L F
Sbjct: 359 LDWLICDRVTVPEAEAAHYRPAPLRLEGCYQANDGQRPLLPAVDRPGEGLPEAAFVFACA 418
Query: 364 NNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
++ KIT + W RI+ AVP S L +V+ P ++ R+ + GL+ R+
Sbjct: 419 SHFYKITEPLFAAWCRIVAAVPGSVLWLVEDTPEGQAALAGRW----QAAGLDPHRLIFA 474
Query: 423 PLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK 482
P + + +L D+ LDT PY T ++L MG+P +T+AG + + SLL
Sbjct: 475 PRVDPAR-YRARLALADLFLDTMPYNAGTIASDALRMGLPVLTLAGRTFSGRMAASLLAA 533
Query: 483 VGLKHLIAKNEDEYVQLALQLASDVTALANL 513
VGL+ IA + + YV A+ +A+D A L
Sbjct: 534 VGLEDCIAPDLEAYVARAVAIATDPAAAPAL 564
>gi|344257396|gb|EGW13500.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Cricetulus griseus]
Length = 1444
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 172/378 (45%), Gaps = 45/378 (11%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
+ NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+
Sbjct: 274 LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR 333
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI
Sbjct: 334 ISPKFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAI 393
Query: 121 DAYEQCLKIDPDSRNA--------------------------------GQNRLLAMNY-- 146
+Y LK+ PD +A +NRL +++
Sbjct: 394 ASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 453
Query: 147 -----INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHS 199
++ G + E H + + + + Y + K + L +GYVS D+ H
Sbjct: 454 SMLYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHP 513
Query: 200 VSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAA 258
S+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A
Sbjct: 514 TSHLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAAD 570
Query: 259 MVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPP 318
+ +D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P
Sbjct: 571 RIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPA 630
Query: 319 ETKQKHVEELIRLPECFL 336
E +++ E+L +P F
Sbjct: 631 EVAEQYSEKLAYMPHTFF 648
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 208 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 267
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 268 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 327
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 328 YKEAIRISPKFADAYSN 344
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 242 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 301
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +P +A+AY+N+G ++ + A+
Sbjct: 302 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPKFADAYSNMGNTLKEMQDVQGALQC 361
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + ++I+P +A N LA + + G+ + ++R
Sbjct: 362 YTRAIQINPAFADAHSN--LASIHKDSGNIPEAIASYR 397
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 174 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 233
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 234 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 293
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 294 YRKALEVFPEFAAAHSN 310
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 31/177 (17%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 53 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 112
Query: 73 GVVYTVQGKMDAAAEMI-----------------------------EKAIAANPTYAEAY 103
G M+ A + KA+ +P + +AY
Sbjct: 113 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAVTLDPNFLDAY 172
Query: 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
NLG + ++A A+ AY + L + P+ N LA Y +G D + +R
Sbjct: 173 INLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 227
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A +P+ +A NLG + K+ D+AV Y ALS+ PN + NL VY QG +D
Sbjct: 161 AVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLID 220
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
A + +AI P + +AY NL ++ GS++ A D Y L++ P
Sbjct: 221 LAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCP 268
>gi|429208817|ref|ZP_19200061.1| hypothetical protein D516_2259 [Rhodobacter sp. AKP1]
gi|428188242|gb|EKX56810.1| hypothetical protein D516_2259 [Rhodobacter sp. AKP1]
Length = 590
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 158/335 (47%), Gaps = 19/335 (5%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIW 245
L +GY+S D+ H++S+ I L HD ++VV Y A + + R +V+
Sbjct: 234 LRLGYLSSDFCRHAMSFLIAELLERHDRSRFEVVGYCASPEDGSPE---RARVLAALDRH 290
Query: 246 RDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPT 305
I + ++ A +R D+ID+L++L G T + G++ +PAPVQ T++GY LP
Sbjct: 291 VPIGPLSDEAAARRIRADEIDLLIDLNGLTRGARPGILRWKPAPVQATYLGYIGPVPLPE 350
Query: 306 IDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVC--PTPALTNGFITFGSF 363
+D+ I D + P + +RL C+ P P L F
Sbjct: 351 LDWLICDRVTVPEAEAAHYRPAPLRLEGCYQANDGQRPLLPAVDRPGEGLPEAAFVFACA 410
Query: 364 NNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLL 422
++ KIT + W RI+ AVP S L +V+ P ++ R+ ++ R+D
Sbjct: 411 SHFYKITEPLFAAWCRIVAAVPGSVLWLVEDTPEGQAALAGRW---------QAARLDPH 461
Query: 423 PLILLNHDHMQAY----SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
LI Y +L D+ LDT PY T ++L MG+P +T+AG + + S
Sbjct: 462 RLIFAPRVDPARYRARLALADLFLDTMPYNAGTIASDALRMGLPVLTLAGRTFSGRMAAS 521
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANL 513
LLT VGL+ IA + + YV A+ +A+D A L
Sbjct: 522 LLTAVGLEDCIAPDLEAYVARAVAIATDPAAAPAL 556
>gi|350396796|ref|XP_003484668.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Bombus impatiens]
Length = 1065
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 170/382 (44%), Gaps = 60/382 (15%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A Y A P A A +NL + + + L++A+ Y+ A+ I+
Sbjct: 351 NLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ 410
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 411 PTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQS 470
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT-SWDNTKD 181
Y LK+ PD +A Y N H ++ D+ R +L S D +
Sbjct: 471 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYEARMKKLVSIVAEQLDKNRL 521
Query: 182 P------------------------------------ERP----------LVIGYVSPDY 195
P ++P L IGYVS D+
Sbjct: 522 PSVHPHHSMLYPLSHEFRKAIAARHANLCIEKIHVLHKQPYKYPREIGARLKIGYVSSDF 581
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EK 254
H S+ +++ H+ QN ++ Y+ + AD T FR K+ ++ + D+ I
Sbjct: 582 GNHPTSHLMQSIPGLHERQNVEIFCYA--LSADDGTT-FRAKIAREAEHFVDLSQIPCNG 638
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
K A + D I ILV + G+T + + A +PAPVQV W+GYP T+G +DY ITD +
Sbjct: 639 KAADRINADGIHILVNMNGYTKGARNEIFALRPAPVQVMWLGYPGTSGASFMDYLITDEV 698
Query: 315 ADPPETKQKHVEELIRLPECFL 336
P E ++ E+L +P +
Sbjct: 699 TSPLELANQYSEKLAYMPHTYF 720
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P L +WA IL VPNS L + P + +T +QLGL
Sbjct: 855 VVYCNFNQLYKIDPLTLHMWAHILKHVPNSVLWLLRFPAVGEP---NLQATAQQLGLAPG 911
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ L + +H++ L D+ LDT G TT+ + L+ G P VT+ G A V
Sbjct: 912 RI-LFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 970
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G LIA+ EY +A++L +D L R + S+SP+ + + +A+G+E
Sbjct: 971 SQLNTLGCPELIARTRQEYQDIAIRLGTDREYLKATRAKVWKARSESPLFNCKLYAVGME 1030
Query: 538 STYRNMWHRYCKGDVP 553
Y+ MW R+ +G+ P
Sbjct: 1031 MLYKKMWERFARGEKP 1046
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K LD+A CY A+ +P+F
Sbjct: 153 VAAGDM---EQAVQAYVTALQYNPDLYCVRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+A +P + +AY NLG + ++A A+ AY +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLR 269
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ NA + LA Y +G D + +R
Sbjct: 270 ALNLSPN--NAVVHGNLACVYYEQGLIDLAIDTYR 302
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 215 NLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLS 274
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G + A D
Sbjct: 275 PNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDC 334
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y L++ P DS N N YI E
Sbjct: 335 YNTALRLCPSHADSLNNLANIKREQGYIEEA 365
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ + +A +CY AL +
Sbjct: 283 NLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLC 342
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + SLNNL + QG ++ A + KA+ P +A A++NL + + G ++ A+
Sbjct: 343 PSHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMH 402
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 403 YKEAIRIQPTFADAYSN 419
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E + A Y A P A++ NNL I +++ +++A Y AL +
Sbjct: 317 NLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATRLYLKALEVF 376
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK++ A ++AI PT+A+AY+N+G ++ I A+
Sbjct: 377 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQC 436
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + ++I+P +A N LA + + G+ + +++R
Sbjct: 437 YTRAIQINPAFADAHSN--LASIHKDSGNIPEAIQSYR 472
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 249 NLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 308
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G++ A + A+ P++A++ NNL + R+ G I A
Sbjct: 309 PNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATRL 368
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 369 YLKALEVFPEFAAAHSN 385
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + + + LA NP AEA +NLG +YK+R L +A+E Y+ A+ +KP+F NL
Sbjct: 89 RLEKSAHYSSLAIKQNPLLAEAYSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINL 148
Query: 73 GVVYTVQGKMDAA----------------------------AEMIE------KAIAANPT 98
G M+ A A + E KAI P
Sbjct: 149 AAALVAAGDMEQAVQAYVTALQYNPDLYCVRSDLGNLLKALARLDEAKACYLKAIETRPD 208
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 209 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDA---------YINLGN 252
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 30 HCAE----ACNNLGV------IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
HC + NN GV I+ L+K+ +A+ P +++ +NLG VY +
Sbjct: 62 HCMQLWRQETNNTGVLLLLSSIHFQCRRLEKSAHYSSLAIKQNPLLAEAYSNLGNVYKER 121
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G++ A E A+ P + + Y NL AG + A+ AY L+ +PD
Sbjct: 122 GQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYVTALQYNPD 174
>gi|384418009|ref|YP_005627369.1| hypothetical protein XOC_0996 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353460923|gb|AEQ95202.1| tetratricopeptide repeat domain protein [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 568
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 167/369 (45%), Gaps = 20/369 (5%)
Query: 186 LVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYK---VVVYSAVVKADAKTIRFREKVMKKG 242
L +G+VS + H V+ Q + V A D IR R + +G
Sbjct: 206 LQLGFVSNGFGAHPTGLLTVG--VFEALQRRQPDMQVHLFATSHDDGSEIRAR---LAQG 260
Query: 243 GIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG 302
D+ + A +R+ ID+L +L G + + A +PAP+Q+ W+ YP T+G
Sbjct: 261 TRVHDVTALGHLATAQHIRDQGIDLLFDLRGWGGGGRPEVFALRPAPIQINWLAYPGTSG 320
Query: 303 LPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN-GFITFG 361
P +DY + D++A PP + + E+++RLP F PS + V P+ G G
Sbjct: 321 APWMDYVLGDAVALPPSLEPFYSEQVLRLPRVF---QPSDTSRIVAEPPSRAECGLPELG 377
Query: 362 S----FNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ FNN K+ P+ + +L AVP L + P D+ F T G++
Sbjct: 378 AVLCCFNNSYKLNPRSMARMLAVLRAVPGCVLWLLSGPGEADARLRAFAQT---QGVDPQ 434
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ +P L + ++ Y ++ LDT PY TT ++L+ G P +T G A V
Sbjct: 435 RLVFMP-KLPHPRYLARYRHANLFLDTHPYNAHTTASDALWAGCPVLTTPGETFAARVAG 493
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
SL +GL + ++ +V A+ LASD AL +R L + +S V D FA L
Sbjct: 494 SLNQHLGLDEMNVVDDAAFVAKAIALASDSNALRGVRARLAEQRLRSGVFDMDGFADDLA 553
Query: 538 STYRNMWHR 546
+ R + R
Sbjct: 554 ALLRGVARR 562
>gi|449267896|gb|EMC78787.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit, partial [Columba livia]
Length = 1036
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 323 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 382
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 383 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 442
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 443 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 493
Query: 172 ---------------------------------------QYTSWDNTKDPERPLVIGYVS 192
Y + K E L IGYVS
Sbjct: 494 PSVHPHHSMLYPLSHSFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKASEGRLRIGYVS 553
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ ++V Y+ + D T FR KVM + + D+ I
Sbjct: 554 SDFGNHPTSHLMQSIPGMHNSDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIP 610
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I IL+ + G+T + + A +PAP+Q W+GYP T+G +DY IT
Sbjct: 611 CNGKAADRIHQDGIHILINMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIIT 670
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 671 DKETSPVEVAEQYSEKLAYMPNTFF 695
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P LQ+WA IL VPNS L + P + ++ + LGL
Sbjct: 832 VVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNLGLSQN 888
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 889 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 947
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + LE
Sbjct: 948 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTTDLE 1007
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1008 RLYLQMWDHYAAGNKP 1023
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A ECY AL +
Sbjct: 255 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVEAEECYNTALRLC 314
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 315 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 374
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 375 YKEAIRISPTFADAYSN 391
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 125 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 181
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 182 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 241
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 242 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 274
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A++ NNL I +++ N+++AV Y+ AL + P F+ + +NL V QG
Sbjct: 307 YNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 366
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
K+ A ++AI +PT+A+AY+N+G ++ + A+ Y + ++I+P +A N
Sbjct: 367 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 425
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 61 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 120
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 121 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 180
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 181 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 224
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 187 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 246
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS+ A +
Sbjct: 247 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVEAEEC 306
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 307 YNTALRLCPTHADSLNN 323
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 221 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 280
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 281 PHFPDAYCNLANALKEKGSVVEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 340
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 341 YRKALEVFPEFAAAHSN 357
>gi|395546237|ref|XP_003774996.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit
[Sarcophilus harrisii]
Length = 1075
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 362 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 421
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 422 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 481
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRL------LAM 144
Y LK+ PD +A +NRL +M
Sbjct: 482 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 541
Query: 145 NY-INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
Y ++ G + E H + + + + Y + K E L +GYVS D+ H S
Sbjct: 542 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKVSEGRLRVGYVSSDFGNHPTS 601
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 602 HLMQSIPGMHNSDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 658
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 659 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 718
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 719 AEQYSEKLAYMPNTFF 734
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 871 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 927
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 928 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 986
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAKN EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 987 SQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1046
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1047 RLYLQMWDHYAAGNKP 1062
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 294 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 353
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 354 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 413
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 414 YKEAIRISPTFADAYSN 430
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 226 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 285
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 286 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 345
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 346 YNTALRLCPTHADSLNN 362
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 164 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 220
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 221 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 280
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 281 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 313
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A++ NNL I +++ N+++AV Y+ AL + P F+ + +NL V QG
Sbjct: 346 YNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 405
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
K+ A ++AI +PT+A+AY+N+G ++ + A+ Y + ++I+P +A N
Sbjct: 406 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 464
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 100 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 159
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 160 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 219
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 220 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 263
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 260 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 319
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 320 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 379
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 380 YRKALEVFPEFAAAHSN 396
>gi|340715916|ref|XP_003396453.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Bombus terrestris]
Length = 1065
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 170/382 (44%), Gaps = 60/382 (15%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A Y A P A A +NL + + + L++A+ Y+ A+ I+
Sbjct: 351 NLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ 410
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 411 PTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQS 470
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT-SWDNTKD 181
Y LK+ PD +A Y N H ++ D+ R +L S D +
Sbjct: 471 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYEARMKKLVSIVAEQLDKNRL 521
Query: 182 P------------------------------------ERP----------LVIGYVSPDY 195
P ++P L IGYVS D+
Sbjct: 522 PSVHPHHSMLYPLSHEFRKAIAARHANLCIEKIHVLHKQPYKYPREIGARLKIGYVSSDF 581
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EK 254
H S+ +++ H+ QN ++ Y+ + AD T FR K+ ++ + D+ I
Sbjct: 582 GNHPTSHLMQSIPGLHERQNVEIFCYA--LSADDGTT-FRAKIAREAEHFVDLSQIPCNG 638
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
K A + D I ILV + G+T + + A +PAPVQV W+GYP T+G +DY ITD +
Sbjct: 639 KAADRINADGIHILVNMNGYTKGARNEIFALRPAPVQVMWLGYPGTSGASFMDYLITDEV 698
Query: 315 ADPPETKQKHVEELIRLPECFL 336
P E ++ E+L +P +
Sbjct: 699 TSPLELANQYSEKLAYMPHTYF 720
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P L +WA IL VPNS L + P + +T +QLGL
Sbjct: 855 VVYCNFNQLYKIDPLTLHMWAHILKHVPNSVLWLLRFPAVGEP---NLQATAQQLGLAPG 911
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ L + +H++ L D+ LDT G TT+ + L+ G P VT+ G A V
Sbjct: 912 RI-LFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 970
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G LIA+ EY +A++L +D L R + S+SP+ + + +A+G+E
Sbjct: 971 SQLNTLGCPELIARTRQEYQDIAIRLGTDREYLKATRAKVWKARSESPLFNCKLYAVGME 1030
Query: 538 STYRNMWHRYCKGDVP 553
Y+ MW R+ +G+ P
Sbjct: 1031 MLYKKMWERFARGEKP 1046
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K LD+A CY A+ +P+F
Sbjct: 153 VAAGDM---EQAVQAYVTALQYNPDLYCVRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+A +P + +AY NLG + ++A A+ AY +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLR 269
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ NA + LA Y +G D + +R
Sbjct: 270 ALNLSPN--NAVVHGNLACVYYEQGLIDLAIDTYR 302
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 215 NLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLS 274
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G + A D
Sbjct: 275 PNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDC 334
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y L++ P DS N N YI E
Sbjct: 335 YNTALRLCPSHADSLNNLANIKREQGYIEEA 365
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ + +A +CY AL +
Sbjct: 283 NLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLC 342
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + SLNNL + QG ++ A + KA+ P +A A++NL + + G ++ A+
Sbjct: 343 PSHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMH 402
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 403 YKEAIRIQPTFADAYSN 419
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E + A Y A P A++ NNL I +++ +++A Y AL +
Sbjct: 317 NLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATRLYLKALEVF 376
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK++ A ++AI PT+A+AY+N+G ++ I A+
Sbjct: 377 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQC 436
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + ++I+P +A N LA + + G+ + +++R
Sbjct: 437 YTRAIQINPAFADAHSN--LASIHKDSGNIPEAIQSYR 472
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 249 NLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 308
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G++ A + A+ P++A++ NNL + R+ G I A
Sbjct: 309 PNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATRL 368
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 369 YLKALEVFPEFAAAHSN 385
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + + + LA NP AEA +NLG +YK+R L +A+E Y+ A+ +KP+F NL
Sbjct: 89 RLEKSAHYSSLAIKQNPLLAEAYSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINL 148
Query: 73 GVVYTVQGKMDAA----------------------------AEMIE------KAIAANPT 98
G M+ A A + E KAI P
Sbjct: 149 AAALVAAGDMEQAVQAYVTALQYNPDLYCVRSDLGNLLKALARLDEAKACYLKAIETRPD 208
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 209 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDA---------YINLGN 252
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 30 HCAE----ACNNLGV------IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
HC + NN GV I+ L+K+ +A+ P +++ +NLG VY +
Sbjct: 62 HCMQLWRQETNNTGVLLLLSSIHFQCRRLEKSAHYSSLAIKQNPLLAEAYSNLGNVYKER 121
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G++ A E A+ P + + Y NL AG + A+ AY L+ +PD
Sbjct: 122 GQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYVTALQYNPD 174
>gi|386717186|ref|YP_006183512.1| glycosyl transferases group 1:TPR repeat [Stenotrophomonas
maltophilia D457]
gi|384076748|emb|CCH11333.1| Glycosyl transferases group 1:TPR repeat [Stenotrophomonas
maltophilia D457]
Length = 568
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 164/364 (45%), Gaps = 15/364 (4%)
Query: 185 PLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGI 244
PL +G++S + H A L + + + A+ +AD IR R + +
Sbjct: 203 PLRVGFLSNGFGAHPTGLLTVALLEHLRHDPALQLHLFALNRADGSGIRERLQSATR--- 259
Query: 245 WRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
++ + +AA +R ID+L +L G ++A +PAP+Q+ W+ YP T+G
Sbjct: 260 LHEVAALRHADIAARIRAQGIDLLFDLRGWGGGGTPEVLAMRPAPLQLNWLAYPGTSGAR 319
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPA-----LTNGFIT 359
+D + D P + E ++RLP F PS + P+P+ L +
Sbjct: 320 WLDAVVADEFVLPAALEPHFSERVLRLPRAF---QPSDNTRTLEPSPSRAECGLPEHGVV 376
Query: 360 FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRV 419
F FNN K+ P+ + +L AVP S L + P D+ R + + GL+ R+
Sbjct: 377 FCCFNNSYKLNPRSMGRAFAVLQAVPGSLLWLLSGPGQADA---RLRTAAQAAGLDPARL 433
Query: 420 DLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479
+ L + ++ Y L D+ LDT PY TT ++L+ G P +T G A V SL
Sbjct: 434 VFM-AKLPHPRYLARYPLADLFLDTHPYNAHTTASDALWAGCPVLTCPGDTFAARVAGSL 492
Query: 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST 539
+GL + ++ ++ A L +D ALA+LR L +S + D FA L +
Sbjct: 493 NHHLGLARMNVADDAAFIATASALGNDPAALASLRAELAQARERSGLFDMAGFARDLSAL 552
Query: 540 YRNM 543
+ +
Sbjct: 553 LQRL 556
>gi|118089398|ref|XP_001232519.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Gallus gallus]
Length = 1035
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 322 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 381
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 382 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 441
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 442 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 492
Query: 172 ---------------------------------------QYTSWDNTKDPERPLVIGYVS 192
Y + K E L IGYVS
Sbjct: 493 PSVHPHHSMLYPLSHSFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKASEGRLRIGYVS 552
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ ++V Y+ + D T FR KVM + + D+ I
Sbjct: 553 SDFGNHPTSHLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFVDLSQIP 609
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I IL+ + G+T + + A +PAP+Q W+GYP T+G +DY IT
Sbjct: 610 CNGKAADRIHQDGIHILINMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIIT 669
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 670 DKETSPVEVAEQYSEKLAYMPNTFF 694
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P LQ+WA IL VPNS L + P + ++ + LGL
Sbjct: 831 VVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNLGLSQN 887
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 888 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 946
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 947 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMDLE 1006
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1007 RLYLQMWDHYAAGNKP 1022
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A ECY AL +
Sbjct: 254 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLC 313
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 314 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 373
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 374 YKEAIRISPTFADAYSN 390
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 124 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 240
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 241 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 273
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 288 NLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 347
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 348 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 407
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 408 YTRAIQINPAFADAHSN 424
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 186 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 245
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A +
Sbjct: 246 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEEC 305
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 306 YNTALRLCPTHADSLNN 322
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 60 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 119
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 120 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 179
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 180 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 223
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 220 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 279
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 280 PHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 339
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 340 YRKALEVFPEFAAAHSN 356
>gi|363732735|ref|XP_003641145.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Gallus gallus]
Length = 1045
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 452 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 502
Query: 172 ---------------------------------------QYTSWDNTKDPERPLVIGYVS 192
Y + K E L IGYVS
Sbjct: 503 PSVHPHHSMLYPLSHSFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKASEGRLRIGYVS 562
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ ++V Y+ + D T FR KVM + + D+ I
Sbjct: 563 SDFGNHPTSHLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFVDLSQIP 619
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I IL+ + G+T + + A +PAP+Q W+GYP T+G +DY IT
Sbjct: 620 CNGKAADRIHQDGIHILINMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIIT 679
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 680 DKETSPVEVAEQYSEKLAYMPNTFF 704
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P LQ+WA IL VPNS L + P + ++ + LGL
Sbjct: 841 VVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNLGLSQN 897
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 898 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 956
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 957 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMDLE 1016
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1017 RLYLQMWDHYAAGNKP 1032
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A ECY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 298 NLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A +
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEEC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|358341529|dbj|GAA37010.2| polypeptide N-acetylglucosaminyltransferase [Clonorchis sinensis]
Length = 1056
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 169/375 (45%), Gaps = 44/375 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E K + AI Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 324 NLANIKREQGKAEEAIRLYARALEIYPEFAVAHSNLASMLQLQGKLQEALLHYREAIRIS 383
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + ++AI NP +A+A++NL + +D+G+++ AI +
Sbjct: 384 PTFADAYSNMGNTLKELQDVQGAMQCYQRAIQINPAFADAHSNLASILKDSGNLTEAITS 443
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHD-----DKLFEAHRDW--GKRFMRLYSQYTS 175
Y+ LK+ P+ +A N + + + D KL +D R ++ ++
Sbjct: 444 YKTALKLKPNFPDAFCNLAHCLQIVCDWSDYKHRMKKLVSMVQDQLDSNRLPSVHPHHSM 503
Query: 176 -WDNTKDPERP--------------------------------LVIGYVSPDYFTHSVSY 202
+ T D R L IGYVS D+ H S+
Sbjct: 504 LYPLTHDQRRKIAGKHASLCLEKVSLLHHLPFRFPKKLQPGLRLRIGYVSSDFCNHPTSH 563
Query: 203 FIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMVR 261
+++ +HD +V YS A FR KV + + D+ GI + A +
Sbjct: 564 LMQSIPGFHDRTKVEVFCYSL---APDDGTNFRAKVANEAEHFVDLSGIQCHGRAADKIA 620
Query: 262 EDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETK 321
D I IL+ + G+T + + A +PAP+Q W+GYP T+G +DY ITDS+ P
Sbjct: 621 SDGIHILLNMNGYTKGARNEIFALKPAPIQAMWLGYPGTSGSTFMDYIITDSVTSPMHLA 680
Query: 322 QKHVEELIRLPECFL 336
Q++ E+L +P F
Sbjct: 681 QQYSEKLAYMPRTFF 695
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E K A +Y A P A++ NNL I +++ ++A+ Y AL I
Sbjct: 290 NLANALKEKGKVSEAEDYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYARALEIY 349
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL + +QGK+ A +AI +PT+A+AY+N+G ++ + A+
Sbjct: 350 PEFAVAHSNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQC 409
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I+P +A N
Sbjct: 410 YQRAIQINPAFADAHSN 426
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y +++ +D A++ Y+ A+ ++
Sbjct: 222 NLGNVLKEARIFDRAVAAYLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQ 281
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +GK+ A + A+ PT+A++ NNL + R+ G AI
Sbjct: 282 PNFPDAYCNLANALKEKGKVSEAEDYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRL 341
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L+I P+ A N
Sbjct: 342 YARALEIYPEFAVAHSN 358
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 34/153 (22%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + + F +LA NP AEA +NLG ++K+R L +A++ Y+ ALSIKP+F NL
Sbjct: 62 RMERSAYFSQLAIKQNPLMAEAYSNLGNVFKERGQLKEAIDNYRHALSIKPDFIDGYINL 121
Query: 73 GV------------------------VYTVQ----------GKMDAAAEMIEKAIAANPT 98
+Y V+ G++D A KAI PT
Sbjct: 122 AAALVAAGDMESAVNAYATALQYNPDLYCVRSDLGNLLKALGRLDEAKSCYLKAIETCPT 181
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+A A++NLG ++ I LAI +E+ + +DP
Sbjct: 182 FAVAWSNLGCVFNAQNEIWLAIHHFEKAVTLDP 214
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K LD+A CY A+ P F
Sbjct: 126 VAAGDM---ESAVNAYATALQYNPDLYCVRSDLGNLLKALGRLDEAKSCYLKAIETCPTF 182
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ Q ++ A EKA+ +P++ +AY NLG + ++A A+ AY +
Sbjct: 183 AVAWSNLGCVFNAQNEIWLAIHHFEKAVTLDPSFLDAYVNLGNVLKEARIFDRAVAAYLR 242
Query: 126 CLKIDPDS 133
L + P++
Sbjct: 243 ALTLSPNN 250
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ F +FN L KI P +++W IL VPNS L + P ++ LS ++GL+ +
Sbjct: 838 VVFCNFNQLYKIDPSTMRMWVEILKNVPNSVLWLLRFPAAGEA---GALSAATEMGLQQV 894
Query: 418 -RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476
R + + +H++ + D+ LDT G TT + L+ G P VT+ A V
Sbjct: 895 QRRIIFSNVAPKEEHVRRGQVADVCLDTPLCNGHTTGMDVLWAGCPVVTLPLETLASRVA 954
Query: 477 VSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALA--------------NLRMSLRDLMS 522
S L +G L+A +++YV++A +L ++ L LR+S +DL
Sbjct: 955 ASQLHALGCPELVANTQEDYVRIASKLGNNREYLQAMRAKPLTHRDINHQLRLSAKDLAV 1014
Query: 523 KSPVCDGQN 531
+ GQN
Sbjct: 1015 RLLTLIGQN 1023
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P +A NLG + K+ D+AV Y AL++
Sbjct: 188 NLGCVFNAQNEIWLAIHHFEKAVTLDPSFLDAYVNLGNVLKEARIFDRAVAAYLRALTLS 247
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY Q +D A + ++AI P + +AY NL ++ G +S A D
Sbjct: 248 PNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFPDAYCNLANALKEKGKVSEAEDY 307
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 308 YNTALRLCPTHADSLNN 324
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y+ A P+ +A NL K++ + +A + Y AL +
Sbjct: 256 NLACVYYEQNLIDLAIDTYKRAIELQPNFPDAYCNLANALKEKGKVSEAEDYYNTALRLC 315
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QGK + A + +A+ P +A A++NL + + G + A+
Sbjct: 316 PTHADSLNNLANIKREQGKAEEAIRLYARALEIYPEFAVAHSNLASMLQLQGKLQEALLH 375
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I P +A N
Sbjct: 376 YREAIRISPTFADAYSN 392
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +L L ++ +M+ +A + AI NP AEAY+NLG ++++ G + AID
Sbjct: 44 PENTSTLLLLSSIHFQCRRMERSAYFSQLAIKQNPLMAEAYSNLGNVFKERGQLKEAIDN 103
Query: 123 YEQCLKIDPD 132
Y L I PD
Sbjct: 104 YRHALSIKPD 113
>gi|326918804|ref|XP_003205676.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like,
partial [Meleagris gallopavo]
Length = 1038
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 325 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 384
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 385 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 444
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 445 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 495
Query: 172 ---------------------------------------QYTSWDNTKDPERPLVIGYVS 192
Y + K E L IGYVS
Sbjct: 496 PSVHPHHSMLYPLSHSFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKASEGRLRIGYVS 555
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ ++V Y+ + D T FR KVM + + D+ I
Sbjct: 556 SDFGNHPTSHLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFVDLSQIP 612
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I IL+ + G+T + + A +PAP+Q W+GYP T+G +DY IT
Sbjct: 613 CNGKAADRIHQDGIHILINMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIIT 672
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 673 DKETSPVEVAEQYSEKLAYMPNTFF 697
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P LQ+WA IL VPNS L + P + ++ + LGL
Sbjct: 834 VVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNLGLSQN 890
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 891 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 949
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 950 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMDLE 1009
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1010 RLYLQMWDHYAAGNKP 1025
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A ECY AL +
Sbjct: 257 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLC 316
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 317 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 376
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 377 YKEAIRISPTFADAYSN 393
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 127 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 183
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 184 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 243
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 244 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 276
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 291 NLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 350
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 351 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 410
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 411 YTRAIQINPAFADAHSN 427
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 189 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 248
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A +
Sbjct: 249 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEEC 308
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 309 YNTALRLCPTHADSLNN 325
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 63 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 122
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 123 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 182
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 183 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 226
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 223 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 282
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 283 PHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 342
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 343 YRKALEVFPEFAAAHSN 359
>gi|47222947|emb|CAF99103.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1037
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 169/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + AI Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 323 NLANIKREQGNIEEAIQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 382
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 383 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 442
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT-SWDNTKD 181
Y LK+ PD +A Y N H ++ D+ +R +L + D +
Sbjct: 443 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVTIVADQLDKNRL 493
Query: 182 P----------------------------------------ERP---------LVIGYVS 192
P E P L +GYVS
Sbjct: 494 PSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINALHKPPYEHPKDLKASGGRLRVGYVS 553
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KV+ + + D+ I
Sbjct: 554 SDFGNHPTSHLMQSIPGMHNPEKFEVFCYA--LSPDDST-NFRVKVVAEAHHFVDLSQIS 610
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D + ILV + G+T + + A +PAPVQ W+GYP T+G P +DY I+
Sbjct: 611 CNGKAADRIHQDGVHILVNMNGYTKGARNELFALRPAPVQAMWLGYPGTSGAPFMDYIIS 670
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 671 DKETSPIEVAEQYSEKLAYMPHTFF 695
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 133/280 (47%), Gaps = 30/280 (10%)
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCP 349
+QVT G+ + GL T +IT+ A EE++R + T + G
Sbjct: 786 IQVTINGFTVSNGLATT--QITNKAATG--------EEVLRT----VVVTTRSQYG---- 827
Query: 350 TPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
L I + +FN L KI P LQ+WA IL VPNS L + P + ++
Sbjct: 828 ---LPEDAIVYCNFNQLYKIDPPTLQMWANILTRVPNSVLWLLRFPAVGEPNIQQYA--- 881
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
+++GL + R+ P + +H++ L D+ LDT G TT + L+ G P VTM G
Sbjct: 882 QKVGLPASRIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGE 940
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
A V S L+ +G LIA++ +EY +A++L SD+ L +R + SP+ +
Sbjct: 941 TLASRVATSQLSCLGCPELIAQSHEEYEDIAVKLGSDMEYLKMVRARVWKQRICSPLFNT 1000
Query: 530 QNFALGLESTYRNMWHRYCKGDVPSLKRMEMLQQQVVSEE 569
+ + + LE Y MW Y KG+ P E L Q V + E
Sbjct: 1001 KQYTMDLEKLYLRMWEHYSKGNKP-----EHLVQTVEASE 1035
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 255 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 314
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 315 PTHADSLNNLANIKREQGNIEEAIQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 374
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 375 YKEAIRISPTFADAYSN 391
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++A++ Y+ AL +
Sbjct: 289 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAIQLYRKALEVF 348
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 349 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 408
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 409 YTRAIQINPAFADAHSN 425
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 221 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 280
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I AI
Sbjct: 281 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAIQL 340
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 341 YRKALEVFPEFAAAHSN 357
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 187 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 246
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 247 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 306
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 307 YNTALRLCPTHADSLNN 323
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 56/179 (31%)
Query: 20 FYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
FY LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 55 FYTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAA 114
Query: 80 GKMDAAAEM---------------------------IE--------------------KA 92
G M+ A + +E KA
Sbjct: 115 GDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKPAAATSLTKSKNMACYLKA 174
Query: 93 IAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
I P +A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 175 IETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 224
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKA-------------V 52
VA G+M + A+ Y A +NP ++LG + K L++A +
Sbjct: 112 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKPAAATSLTKSKNM 168
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
CY A+ +PNF+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++
Sbjct: 169 ACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKE 228
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
A A+ Y + L + P+ N LA Y +G D + +R
Sbjct: 229 ARIFDRAVAGYLRALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 274
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P+ A A +NLG ++ + + A+ ++ A+++ PNF + NLG V
Sbjct: 171 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 230
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
D A +A++ +P +A + NL +Y + G I LAID Y + +++ P
Sbjct: 231 IFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQP 281
>gi|86607970|ref|YP_476732.1| FkbM family methyltransferase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556512|gb|ABD01469.1| methyltransferase, FkbM family [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 1211
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 148/289 (51%), Gaps = 6/289 (2%)
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
+VAA RED+IDI+V + T+++ + A + AP+Q+ W+G + GLP DY D
Sbjct: 442 QVAAQAREDRIDIMVFMDSLTSHDASIVAALRAAPIQIGWLG-GDAVGLPEFDYFFADPY 500
Query: 315 ADPPETKQKHVEELIRLPE-CFLCYTPSPEAGPVCPTPALTNG--FITFGSFNNLAKITP 371
P + + + E++IRLP C + Y A V L G I F + + K TP
Sbjct: 501 ILPEDAQADYHEKIIRLPSYCAVEYLDITPADEVNFKNKLRIGPQDIVFLTAASAYKRTP 560
Query: 372 KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431
+ + +IL AVP L+VK +R R+ ++L + RV L +H
Sbjct: 561 ECIDAHLQILKAVPKGILIVKGSGEIATVIR-RYQERAKELDVLD-RVRFLAKTGTVEEH 618
Query: 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK 491
+L+D+ LDTFPY G T T E+LYMGVP +T+ G + + SLL VGL+ I
Sbjct: 619 RGQLALVDLVLDTFPYTGATHTMEALYMGVPVLTLVGRHYYGRMSYSLLKNVGLEDCITW 678
Query: 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540
+ +E++Q +QL +D + ++ ++D S + D + A +E+ +
Sbjct: 679 SVEEFIQRGIQLGNDPEWINRIKRQIKDSRRWSVIWDPREHARSMEAAF 727
>gi|449499306|ref|XP_002189786.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit, partial
[Taeniopygia guttata]
Length = 1038
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 325 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 384
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 385 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 444
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 445 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 495
Query: 172 ---------------------------------------QYTSWDNTKDPERPLVIGYVS 192
Y + K E L IGYVS
Sbjct: 496 PSVHPHHSMLYPLSHSFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKASEGRLRIGYVS 555
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ ++V Y+ + D T FR KVM + + D+ I
Sbjct: 556 SDFGNHPTSHLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIP 612
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I IL+ + G+T + + A +PAP+Q W+GYP T+G +DY IT
Sbjct: 613 CNGKAADRIHQDGIHILINMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIIT 672
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 673 DKETSPVEVAEQYSEKLAYMPNTFF 697
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P LQ+WA IL VPNS L + P + ++ + LGL
Sbjct: 834 VVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNLGLAQN 890
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 891 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 949
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 950 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMDLE 1009
Query: 538 STYRNMWHRYCKGDVP 553
Y MW G+ P
Sbjct: 1010 RLYLQMWDHCAAGNKP 1025
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A ECY AL +
Sbjct: 257 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVEAEECYNTALRLC 316
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 317 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 376
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 377 YKEAIRISPTFADAYSN 393
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 127 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 183
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 184 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 243
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 244 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 276
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A++ NNL I +++ N+++AV Y+ AL + P F+ + +NL V QG
Sbjct: 309 YNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 368
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
K+ A ++AI +PT+A+AY+N+G ++ + A+ Y + ++I+P +A N
Sbjct: 369 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 427
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 63 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 122
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 123 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 182
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 183 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 226
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 189 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 248
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS+ A +
Sbjct: 249 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVEAEEC 308
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 309 YNTALRLCPTHADSLNN 325
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 223 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 282
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 283 PHFPDAYCNLANALKEKGSVVEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 342
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 343 YRKALEVFPEFAAAHSN 359
>gi|380019749|ref|XP_003693765.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Apis florea]
Length = 1065
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 170/382 (44%), Gaps = 60/382 (15%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A Y A P A A +NL + + + L++A+ Y+ A+ I+
Sbjct: 351 NLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ 410
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 411 PTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQS 470
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT-SWDNTKD 181
Y LK+ PD +A Y N H ++ D+ R +L S D +
Sbjct: 471 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYEARMKKLVSIVAEQLDKNRL 521
Query: 182 P------------------------------------ERP----------LVIGYVSPDY 195
P ++P L IGYVS D+
Sbjct: 522 PSVHPHHSMLYPLSHEFRKAIAARHANLCIEKIHVLHKQPYKYPREIGGRLRIGYVSSDF 581
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EK 254
H S+ +++ H+ QN ++ Y+ + AD T FR K+ ++ + D+ I
Sbjct: 582 GNHPTSHLMQSIPGLHERQNVEIFCYA--LSADDGTT-FRAKIARETEHFVDLSQIPCNG 638
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
K A + D I ILV + G+T + + A +PAPVQV W+GYP T+G +DY ITD +
Sbjct: 639 KAADRINADGIHILVNMNGYTKGARNEIFALRPAPVQVMWLGYPGTSGASFMDYLITDEV 698
Query: 315 ADPPETKQKHVEELIRLPECFL 336
P E ++ E+L +P +
Sbjct: 699 TSPLELASQYSEKLAYMPHTYF 720
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P L +WA IL VPNS L + P + +T +QLGL
Sbjct: 855 VVYCNFNQLYKIDPLTLHMWAHILKHVPNSVLWLLRFPAVGEP---NLQATAQQLGLAPG 911
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ L + +H++ L D+ LDT G TT+ + L+ G P VT+ G A V
Sbjct: 912 RI-LFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 970
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G LIA+ EY +A++L +D L R + S+SP+ + + +A+G+E
Sbjct: 971 SQLNTLGCPELIARTRQEYQDIAIRLGTDREYLKATRAKVWKARSESPLFNCKLYAMGME 1030
Query: 538 STYRNMWHRYCKGDVP 553
Y+ MW RY +G+ P
Sbjct: 1031 MLYKKMWERYARGEKP 1046
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K LD+A CY A+ +P+F
Sbjct: 153 VAAGDM---EQAVQAYVTALQYNPDLYCVRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+A +P + +AY NLG + ++A A+ AY +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLR 269
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ NA + LA Y +G D + +R
Sbjct: 270 ALNLSPN--NAVVHGNLACVYYEQGLIDLAIDTYR 302
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 215 NLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLS 274
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G + A D
Sbjct: 275 PNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDC 334
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y L++ P DS N N YI E
Sbjct: 335 YNTALRLCPSHADSLNNLANIKREQGYIEEA 365
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ + +A +CY AL +
Sbjct: 283 NLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLC 342
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + SLNNL + QG ++ A + KA+ P +A A++NL + + G ++ A+
Sbjct: 343 PSHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMH 402
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 403 YKEAIRIQPTFADAYSN 419
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E + A Y A P A++ NNL I +++ +++A Y AL +
Sbjct: 317 NLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATRLYLKALEVF 376
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK++ A ++AI PT+A+AY+N+G ++ I A+
Sbjct: 377 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQC 436
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + ++I+P +A N LA + + G+ + +++R
Sbjct: 437 YTRAIQINPAFADAHSN--LASIHKDSGNIPEAIQSYR 472
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 249 NLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 308
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G++ A + A+ P++A++ NNL + R+ G I A
Sbjct: 309 PNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATRL 368
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 369 YLKALEVFPEFAAAHSN 385
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + + + LA NP AEA +NLG ++K+R L +A+E Y+ A+ +KP+F NL
Sbjct: 89 RLEKSAHYSSLAIKQNPLLAEAYSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINL 148
Query: 73 GVVYTVQGKMDAA----------------------------AEMIE------KAIAANPT 98
G M+ A A + E KAI P
Sbjct: 149 AAALVAAGDMEQAVQAYVTALQYNPDLYCVRSDLGNLLKALARLDEAKACYLKAIETRPD 208
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 209 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDA---------YINLGN 252
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 30 HCAE----ACNNLGV------IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
HC + NN GV I+ L+K+ +A+ P +++ +NLG V+ +
Sbjct: 62 HCMQLWRQETNNTGVLLLLSSIHFQCRRLEKSAHYSSLAIKQNPLLAEAYSNLGNVFKER 121
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G++ A E A+ P + + Y NL AG + A+ AY L+ +PD
Sbjct: 122 GQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYVTALQYNPD 174
>gi|341897224|gb|EGT53159.1| CBN-OGT-1 protein [Caenorhabditis brenneri]
Length = 1171
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 172/380 (45%), Gaps = 50/380 (13%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E K + A Y A P A A +NL I + + L +A+ Y+ A+ I
Sbjct: 452 NLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLSEAILHYKEAIRIA 511
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G G +AA +AI NP +A+A++NL +++DAG+++ AI +
Sbjct: 512 PTFADAYSNMGNTLKEMGDSNAAIACYNRAIQINPAFADAHSNLASIHKDAGNMAEAIQS 571
Query: 123 YEQCLKIDPDSRNAGQN----------------RLLAMNYINE----------------- 149
Y LK+ PD +A N R+ + I E
Sbjct: 572 YNTALKLKPDFPDAFCNLAHCLQIICDWTGYDKRIRKLVQIVEEQLTKKRLPSVHPHHSM 631
Query: 150 ----GHDDKLFEAHRDWGKRFMRLYSQ--------YTSWDNTKDPERPLVIGYVSPDYFT 197
H ++ A + F +++ Q + + ++ +R L IGYVS D+
Sbjct: 632 LYPLSHATRIAIAAKHASLCFDKVHVQMLGKTPLIHADRFSVQNGQR-LRIGYVSSDFGN 690
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKV 256
H S+ +++ H+ +V Y+ V FR K+M + + D+ I K
Sbjct: 691 HPTSHLMQSIPGMHNRDRVEVFCYALSVN---DGTNFRSKLMAESEHFFDLSTIPCNGKA 747
Query: 257 AAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLAD 316
A + +D I IL+ + G+T + + A +PAP+QV W+GYP+T+G +DY ITD++
Sbjct: 748 AEKIAQDGIHILINMNGYTKGARNEIFALRPAPIQVMWLGYPSTSGATFMDYIITDAVTT 807
Query: 317 PPETKQKHVEELIRLPECFL 336
P + E+L +P F
Sbjct: 808 PLQLACAFTEKLAYMPHTFF 827
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 4/195 (2%)
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL 412
L + I F +FN L KI P L +W +IL VP S L + P+ + ++ +
Sbjct: 959 LPDDAIVFCNFNQLYKIDPATLDMWIKILENVPKSILWLLRFPYQGEEHIRKYCV---ER 1015
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
G+E R+ + + +H++ L D+ LDT G TT + L+ G P VTM A
Sbjct: 1016 GIEQSRI-VFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTGMDILWTGTPMVTMPLDSLA 1074
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
V S L +G+ L+AK EY+++A +L +D LA++R + + S + + + +
Sbjct: 1075 SRVATSQLYALGVPELVAKTRQEYIRIATRLGNDADHLASMRAKVWMARTTSTLFNVKQY 1134
Query: 533 ALGLESTYRNMWHRY 547
+E MW RY
Sbjct: 1135 CHDMEDLLEQMWKRY 1149
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 43/163 (26%)
Query: 23 LAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF----------------- 65
+A NP+CAEA +NLG YK++ +L +A+E Y+ A+ +KP F
Sbjct: 200 MAIKVNPNCAEAYSNLGNYYKEKGHLAEALEHYRTAVKLKPEFIDAYINLAAALVSGGDL 259
Query: 66 SQSLN-----------------NLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
Q++N +LG + GK++ A KAI P +A A++NLG
Sbjct: 260 EQAVNAYFNALAINPDLYCVRSDLGNLLKAMGKLEEAKVCYLKAIETQPQFAVAWSNLGC 319
Query: 109 LYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 320 VFNSQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 353
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 316 NLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVSAYLRALNLH 375
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
N + NL VY QG +D A + +KAI P + +AY NL ++ G I A +A
Sbjct: 376 GNHAVVHGNLACVYYEQGLIDLAIDTYKKAIELQPIFPDAYCNLANALKEKGCIQEAEEA 435
Query: 123 YEQCLKIDP---DSRN 135
Y + L++ P DS+N
Sbjct: 436 YLKALELCPTHADSQN 451
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y+ A P +A NL K++ + +A E Y AL +
Sbjct: 384 NLACVYYEQGLIDLAIDTYKKAIELQPIFPDAYCNLANALKEKGCIQEAEEAYLKALELC 443
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + S NNL + QGK++ A + KA+ P +A A++NL + + G +S AI
Sbjct: 444 PTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLSEAILH 503
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 504 YKEAIRIAPTFADAYSN 520
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ ++ A Y AL I
Sbjct: 418 NLANALKEKGCIQEAEEAYLKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIY 477
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL + QGK+ A ++AI PT+A+AY+N+G ++ G + AI
Sbjct: 478 PEFAAAHSNLASILQQQGKLSEAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSNAAIAC 537
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 538 YNRAIQINPAFADAHSN 554
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + + + A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 350 NLGNVLKEARIFDRAVSAYLRALNLHGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIELQ 409
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F + NL +G + A E KA+ PT+A++ NNL + R+ G I A
Sbjct: 410 PIFPDAYCNLANALKEKGCIQEAEEAYLKALELCPTHADSQNNLANIKREQGKIEDATRL 469
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L+I P+ A N
Sbjct: 470 YLKALEIYPEFAAAHSN 486
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A + A+ Y A NP ++LG + K L++A CY A+ +
Sbjct: 248 NLAAALVSGGDLEQAVNAYFNALAINPDLYCVRSDLGNLLKAMGKLEEAKVCYLKAIETQ 307
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ A
Sbjct: 308 PQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVSA 367
Query: 123 YEQCLKI 129
Y + L +
Sbjct: 368 YLRALNL 374
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
+LG M K + A V Y A P A A +NLG ++ + + A+ ++ A+++
Sbjct: 282 DLGNLLKAMGKLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLD 341
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NLG V D A +A+ + +A + NL +Y + G I LAID
Sbjct: 342 PNFLDAYINLGNVLKEARIFDRAVSAYLRALNLHGNHAVVHGNLACVYYEQGLIDLAIDT 401
Query: 123 YEQCLKIDP 131
Y++ +++ P
Sbjct: 402 YKKAIELQP 410
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 38 LGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP 97
L I NL+K++ MA+ + PN +++ +NLG Y +G + A E A+ P
Sbjct: 181 LSAINFQTKNLEKSMHYSLMAIKVNPNCAEAYSNLGNYYKEKGHLAEALEHYRTAVKLKP 240
Query: 98 TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD---SRNAGQNRLLAMNYINEG 150
+ +AY NL G + A++AY L I+PD R+ N L AM + E
Sbjct: 241 EFIDAYINLAAALVSGGDLEQAVNAYFNALAINPDLYCVRSDLGNLLKAMGKLEEA 296
>gi|423066382|ref|ZP_17055172.1| TPR repeat-containing protein [Arthrospira platensis C1]
gi|406712134|gb|EKD07324.1| TPR repeat-containing protein [Arthrospira platensis C1]
Length = 728
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 138/612 (22%), Positives = 268/612 (43%), Gaps = 81/612 (13%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACN--NLGVIYKDRDNLDKAVECYQMALS 60
NL A +M + A++ + A + + + N G ++ L++A+ ++ A+
Sbjct: 124 NLARALRQMGRESEALIVEQKANQIHSLTGGSVHLYNQGNQLFNQGKLEEAIALWKQAIV 183
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
PN +++ LG+V+ QG+ A +EKAI P A+ N+ +YRD+ ++ A
Sbjct: 184 ADPNLAEAYCQLGIVHRHQGQPQEAIPFLEKAIELKPNLVAAHQNICGIYRDSSDLAAAR 243
Query: 121 DAYEQCLK----IDP---------------------------DSRNAG------------ 137
+A ++ LK IDP +S+ G
Sbjct: 244 NAVDRYLKNCSSIDPIMTAIYAVSICQVSGLNAVALPRFLQLESQLPGLLAHTKPVEIKS 303
Query: 138 --QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTS---------WDNTKDPERPL 186
N L A+ Y+ + + K ++ R G R++ L S ++ + N P + +
Sbjct: 304 LYANLLFALPYLRDDLE-KNYKLQRLIGDRYVSLISPTSTPPRIQTTKGFGNIPSP-KTV 361
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY-SAVVKADAKTIRFREKVMKKGGIW 245
IG +S ++ HSV + + N ++ +Y S D +T F + K
Sbjct: 362 KIGILSKNFCRHSVGWCSADVIKELAALNTEIYLYWSDRPIRDKQTPVFEQVAHKVFAPQ 421
Query: 246 RDIYGI-DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
G+ + +++ +R+D+IDIL++L + ++A +PA ++W+G+ ++ +
Sbjct: 422 NFPQGLPNPQEIVNAIRQDQIDILLDLDSLSVQINTEVLAQKPARFCISWLGF-DSPQIA 480
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP----SPEAGPVCPTPALTNGFITF 360
+ +Y I D PP + + E+LIR+P+ F+ + S + + ++ + +
Sbjct: 481 SDNYFIGDHYTHPPGRESYYTEKLIRMPQTFMAVSGFQRVSADPNTLRQAYRISRDQVVY 540
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS--VRHRFLSTLEQLGLESLR 418
K P +++ IL VP+S LV K D+ +R + + + +G+ R
Sbjct: 541 LCVAPGRKFNPDLVKAQVNILKQVPDSILVHKA---LGDTQIIRETYAAACKAIGVGQHR 597
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ + +H + Y L D+ LD++PY G T + E+L+ P VT GS +G S
Sbjct: 598 IKQISRFATEEEHRKIYMLADVLLDSYPYNGGTHSLEALWFNTPLVTRRGSQFLSRMGYS 657
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS-------PVCDGQN 531
L VG++ IA + +EY ++L + LR S+R + S P+ + +
Sbjct: 658 FLKGVGVEMGIADSWEEYQNWGIRLGIE----PELRQSIRQQLMASKKSENLAPLWNPKA 713
Query: 532 FALGLESTYRNM 543
A L S ++ +
Sbjct: 714 LAKNLYSQFQQL 725
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 39/175 (22%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M N+ G++ + AI Y A F+P+ +A NLG ++ + L+ A++ YQ A++
Sbjct: 57 MGNVSQGRGQI---EEAIRCYAKALEFDPNLPQAHANLGSMFYKQGKLESAIDSYQKAIA 113
Query: 61 IKP-------NFSQSLNNLG-------------VVYTV----------------QGKMDA 84
+KP N +++L +G ++++ QGK++
Sbjct: 114 LKPDLTAVYVNLARALRQMGRESEALIVEQKANQIHSLTGGSVHLYNQGNQLFNQGKLEE 173
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A + ++AI A+P AEAY LG+++R G AI E+ +++ P+ A QN
Sbjct: 174 AIALWKQAIVADPNLAEAYCQLGIVHRHQGQPQEAIPFLEKAIELKPNLVAAHQN 228
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
++D AI + A P+ +G + + R +++A+ CY AL PN Q+ NL
Sbjct: 32 EYDQAIAACQRALELKPNWPPVYVTMGNVSQGRGQIEEAIRCYAKALEFDPNLPQAHANL 91
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
G ++ QGK+++A + +KAIA P Y NL R G S A+
Sbjct: 92 GSMFYKQGKLESAIDSYQKAIALKPDLTAVYVNLARALRQMGRESEAL 139
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 49 DKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
D+A+ Q AL +KPN+ +G V +G+++ A KA+ +P +A+ NLG
Sbjct: 34 DQAIAACQRALELKPNWPPVYVTMGNVSQGRGQIEEAIRCYAKALEFDPNLPQAHANLGS 93
Query: 109 LYRDAGSISLAIDAYEQCLKIDPD 132
++ G + AID+Y++ + + PD
Sbjct: 94 MFYKQGKLESAIDSYQKAIALKPD 117
>gi|328777929|ref|XP_003249419.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Apis mellifera]
Length = 1065
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 170/382 (44%), Gaps = 60/382 (15%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A Y A P A A +NL + + + L++A+ Y+ A+ I+
Sbjct: 351 NLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ 410
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 411 PTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQS 470
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYT-SWDNTKD 181
Y LK+ PD +A Y N H ++ D+ R +L S D +
Sbjct: 471 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYEARMKKLVSIVAEQLDKNRL 521
Query: 182 P------------------------------------ERP----------LVIGYVSPDY 195
P ++P L IGYVS D+
Sbjct: 522 PSVHPHHSMLYPLSHEFRKAIAARHANLCIEKIHVLHKQPYKYPREIGGRLRIGYVSSDF 581
Query: 196 FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EK 254
H S+ +++ H+ QN ++ Y+ + AD T FR K+ ++ + D+ I
Sbjct: 582 GNHPTSHLMQSIPGLHERQNVEIFCYA--LSADDGTT-FRAKIARETEHFVDLSQIPCNG 638
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
K A + D I ILV + G+T + + A +PAPVQV W+GYP T+G +DY ITD +
Sbjct: 639 KAADRINADGIHILVNMNGYTKGARNEIFALRPAPVQVMWLGYPGTSGASFMDYLITDEV 698
Query: 315 ADPPETKQKHVEELIRLPECFL 336
P E ++ E+L +P +
Sbjct: 699 TSPLELASQYSEKLAYMPHTYF 720
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P L +WA IL VPNS L + P + +T +QLGL
Sbjct: 855 VVYCNFNQLYKIDPLTLHMWAHILKHVPNSVLWLLRFPAVGEP---NLQATAQQLGLAPG 911
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ L + +H++ L D+ LDT G TT+ + L+ G P VT+ G A V
Sbjct: 912 RI-LFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 970
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G LIA+ EY +A++L +D L R + S+SP+ + + +A+G+E
Sbjct: 971 SQLNTLGCPELIARTRQEYQDIAIRLGTDREYLKATRAKVWKARSESPLFNCKLYAMGME 1030
Query: 538 STYRNMWHRYCKGDVP 553
Y+ MW RY +G+ P
Sbjct: 1031 MLYKKMWERYARGEKP 1046
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K LD+A CY A+ +P+F
Sbjct: 153 VAAGDM---EQAVQAYVTALQYNPDLYCVRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+A +P + +AY NLG + ++A A+ AY +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLR 269
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ NA + LA Y +G D + +R
Sbjct: 270 ALNLSPN--NAVVHGNLACVYYEQGLIDLAIDTYR 302
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 215 NLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLS 274
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G + A D
Sbjct: 275 PNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDC 334
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y L++ P DS N N YI E
Sbjct: 335 YNTALRLCPSHADSLNNLANIKREQGYIEEA 365
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ + +A +CY AL +
Sbjct: 283 NLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLC 342
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+ + SLNNL + QG ++ A + KA+ P +A A++NL + + G ++ A+
Sbjct: 343 PSHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMH 402
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 403 YKEAIRIQPTFADAYSN 419
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E + A Y A P A++ NNL I +++ +++A Y AL +
Sbjct: 317 NLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATRLYLKALEVF 376
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK++ A ++AI PT+A+AY+N+G ++ I A+
Sbjct: 377 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQC 436
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + ++I+P +A N LA + + G+ + +++R
Sbjct: 437 YTRAIQINPAFADAHSN--LASIHKDSGNIPEAIQSYR 472
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 249 NLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 308
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G++ A + A+ P++A++ NNL + R+ G I A
Sbjct: 309 PNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATRL 368
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 369 YLKALEVFPEFAAAHSN 385
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + + + LA NP AEA +NLG ++K+R L +A+E Y+ A+ +KP+F NL
Sbjct: 89 RLEKSAHYSSLAIKQNPLLAEAYSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINL 148
Query: 73 GVVYTVQGKMDAA----------------------------AEMIE------KAIAANPT 98
G M+ A A + E KAI P
Sbjct: 149 AAALVAAGDMEQAVQAYVTALQYNPDLYCVRSDLGNLLKALARLDEAKACYLKAIETRPD 208
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 209 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDA---------YINLGN 252
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 30 HCAE----ACNNLGV------IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
HC + NN GV I+ L+K+ +A+ P +++ +NLG V+ +
Sbjct: 62 HCMQLWRQETNNTGVLLLLSSIHFQCRRLEKSAHYSSLAIKQNPLLAEAYSNLGNVFKER 121
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G++ A E A+ P + + Y NL AG + A+ AY L+ +PD
Sbjct: 122 GQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYVTALQYNPD 174
>gi|351700623|gb|EHB03542.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Heterocephalus glaber]
Length = 1046
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 173/376 (46%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L + + Y+ A+ I
Sbjct: 332 NLANLKREQGNIEEAVRLYRKALEGFPDFAAAHSNLASVLQQQGKLQETLMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + + A + +AI NPT+A+A++NL ++ D+G+I AI +
Sbjct: 392 PTFADAYSNMGNILKEMQDVQGALQCYTRAIQINPTFADAHSNLASIHMDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRL------LAM 144
Y LK+ PD +A +NRL +M
Sbjct: 452 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLDKNRLPSVHPHHSM 511
Query: 145 NY-INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
Y ++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 512 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 571
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 572 HLMQSIPGMHNSDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADCI 628
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G+ +DY ITD A P E
Sbjct: 629 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGVLFMDYIITDQEASPAEV 688
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 689 AEQYSEKLAYMPYTFF 704
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
L + I + +FN L KI P LQ+WA IL VPNS L + P + ++ +
Sbjct: 836 GLPDDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QN 892
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
+GL R+ P + +H++ L D+ LDT G TT + L+ G P VTM G
Sbjct: 893 MGLPQNRIIFSP-VAPKEEHVRRGQLADVCLDTLLCNGHTTGMDVLWAGTPMVTMPGETL 951
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A V S LT +G LIAKN EY +A++L +D+ L +R + SP+ + +
Sbjct: 952 ASRVATSQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQ 1011
Query: 532 FALGLESTYRNMWHRYCKGDVPS--LKRMEMLQ 562
+ + LE Y MW Y G+ P +K +E+ Q
Sbjct: 1012 YTMELERLYLQMWEHYAAGNKPDHMIKPVEVTQ 1044
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A +NP C++LG + K L++A CY A+ ++PNF+ + NNLG V+ QG++
Sbjct: 149 ALQYNPDLYCVCSDLGNLLKAVGRLEEAKACYLKAIEVQPNFAVAWNNLGCVFNAQGEIW 208
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
A EKA+ +P + +AY NLG + ++A A+ AY + L + P+
Sbjct: 209 LAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRVLSLSPN 257
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D ++ F LA NP AEA NLG +YK+R L +AVE Y+ AL +KP+F NL
Sbjct: 70 RLDRSVHFSTLAIKQNPLLAEAYLNLGNVYKERGQLQEAVEHYRHALRLKPDFIDGYMNL 129
Query: 73 GVVYTVQGKMDAAAEMIE----------------------------------KAIAANPT 98
G M+ A + KAI P
Sbjct: 130 AAALRAAGDMEGAVQACVSALQYNPDLYCVCSDLGNLLKAVGRLEEAKACYLKAIEVQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A+NNLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWNNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E ++AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 264 NLACVFYEQGLIELAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALQLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + +
Sbjct: 324 PTHADSLNNLANLKREQGNIEEAVRLYRKALEGFPDFAAAHSNLASVLQQQGKLQETLMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A++ NNL + +++ N+++AV Y+ AL P+F+ + +NL V QG
Sbjct: 316 YNTALQLCPTHADSLNNLANLKREQGNIEEAVRLYRKALEGFPDFAAAHSNLASVLQQQG 375
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140
K+ ++AI +PT+A+AY+N+G + ++ + A+ Y + ++I+P +A N
Sbjct: 376 KLQETLMHYKEAIRISPTFADAYSNMGNILKEMQDVQGALQCYTRAIQINPTFADAHSN- 434
Query: 141 LLAMNYINEGHDDKLFEAHR 160
LA +++ G+ + ++R
Sbjct: 435 -LASIHMDSGNIPEAIASYR 453
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y LS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRVLSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL V+ QG ++ A + +AI P + +AY NL ++ GS++ A D
Sbjct: 256 PNHALVQCNLACVFYEQGLIELAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALQLCPTHADSLNN 332
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y +P+ A NL ++ ++ ++ A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRVLSLSPNHALVQCNLACVFYEQGLIELAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL L R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALQLCPTHADSLNNLANLKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L+ PD A N
Sbjct: 350 YRKALEGFPDFAAAHSN 366
>gi|222423063|dbj|BAH19513.1| AT3G04240 [Arabidopsis thaliana]
Length = 750
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 165/381 (43%), Gaps = 48/381 (12%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M NLG Y E A ++ + NNL +IYK + N A+ CY L
Sbjct: 362 MANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISCYNEVLR 421
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
I P + +L N G Y G++ A + AI PT AEA+ NL Y+D+G + AI
Sbjct: 422 IDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLASAYKDSGHVEAAI 481
Query: 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD-DKLFEAHRDWGKR--FMRLYSQYTSWD 177
+Y+Q L + PD A N L + + D K+F +R M + +
Sbjct: 482 TSYKQALLLRPDFPEATCNLLHTLQCVCCWEDRSKMFAEVESIIRRQINMSVLPSVQPFH 541
Query: 178 NTKDPERPLVIGYVSPDY---------------FTHSV-------------------SYF 203
P P++ +S Y FTH S F
Sbjct: 542 AIAYPIDPILALEISRKYAAHCSIIASRFGLPPFTHPAGLPVKREGGFKRLRIGYVSSDF 601
Query: 204 IEAPLVY--------HDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKK 255
PL + H+ +N +V Y+ + A+ T +R+++ + + D+ +
Sbjct: 602 GNHPLSHLMGSVFGMHNRENVEVFCYA--LSANDNT-EWRQRIQSEAEHFLDVSAMSSDA 658
Query: 256 VAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLA 315
+A ++ +DKI IL+ L G+T + + A QPAP+QV+++G+P TTG IDY +TD
Sbjct: 659 IAKIINQDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFV 718
Query: 316 DPPETKQKHVEELIRLPECFL 336
P + + E+L+ LP C+
Sbjct: 719 SPLQYAHIYSEKLVHLPHCYF 739
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 76/138 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ Y E + D+AI Y+ A +P EA NNLG KD +D+AV CY L+++
Sbjct: 296 NIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQ 355
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN Q++ NLG +Y M A+ + + +A + +NNL ++Y+ G+ S AI
Sbjct: 356 PNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISC 415
Query: 123 YEQCLKIDPDSRNAGQNR 140
Y + L+IDP + +A NR
Sbjct: 416 YNEVLRIDPLAADALVNR 433
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL + E + A+ +Y+ A P +A NLG +YK +A+ CYQ AL ++
Sbjct: 228 NLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMR 287
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + + N+ +Y QG++D A ++A++ +P + EAYNNLG +D G + A+
Sbjct: 288 PNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRC 347
Query: 123 YEQCLKIDPDSRNAGQN 139
Y QCL + P+ A N
Sbjct: 348 YNQCLALQPNHPQAMAN 364
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 72/128 (56%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
+G Y ++ ++DM I E A P AE N+ +K++ + D+A+ Y +A+ ++P
Sbjct: 93 IGAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRP 152
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
NF+ + +NL Y +G++ A + ++A++ NP +A++NLG L + G I A Y
Sbjct: 153 NFADAWSNLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCY 212
Query: 124 EQCLKIDP 131
+ ++I P
Sbjct: 213 LEAVRIQP 220
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 71/129 (55%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
N+ A+ E D AI +Y +A P+ A+A +NL Y + L +A +C Q ALS+
Sbjct: 126 NMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALSLN 185
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + +NLG + QG + A +A+ PT+A A++NL L+ ++G ++ A+
Sbjct: 186 PLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQY 245
Query: 123 YEQCLKIDP 131
Y++ +K+ P
Sbjct: 246 YKEAVKLKP 254
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL AY + A + A NP +A +NLG + K + + +A CY A+ I+
Sbjct: 160 NLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQ 219
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL ++ G ++ A + ++A+ P + +AY NLG +Y+ G + AI
Sbjct: 220 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMC 279
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNT-KD 181
Y+ L++ P+S A N +A Y +G D ++ R R Y + N KD
Sbjct: 280 YQHALQMRPNSAMAFGN--IASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKD 337
Query: 182 PER 184
R
Sbjct: 338 IGR 340
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
F A+ + + NP + +G IY D + + AL I+P F++ N+
Sbjct: 69 FKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMA 128
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP-- 131
+ +G D A AI P +A+A++NL Y G +S A +Q L ++P
Sbjct: 129 NAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALSLNPLL 188
Query: 132 -DSRNAGQNRLLAMNYINEGH 151
D+ + N + A I+E +
Sbjct: 189 VDAHSNLGNLMKAQGLIHEAY 209
>gi|86606504|ref|YP_475267.1| hypothetical protein CYA_1854 [Synechococcus sp. JA-3-3Ab]
gi|86555046|gb|ABD00004.1| TPR repeat protein [Synechococcus sp. JA-3-3Ab]
Length = 749
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 145/577 (25%), Positives = 241/577 (41%), Gaps = 93/577 (16%)
Query: 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87
NPH A +NLGV+Y+ L+KA+ C++ +LS+ P S G + G+ + A
Sbjct: 163 NPHVALYHHNLGVVYESLGQLEKALSCHRQSLSLNPKAYLSAFQAGKILVNLGRHEEAIS 222
Query: 88 MIEKAIAANPT------YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRL 141
++ ++ NP +AE + LG+ +R+ G S A+D E+ +DP N Q R
Sbjct: 223 LL-GSLLENPDPLAGIPWAEVHFCLGIAHREQGEHSAALDHLEKAWTLDP---NLVQARW 278
Query: 142 LAMNYI-------NEGHDDKL-FEAHRD----------------------WG-------- 163
L Y+ E H +L F H D WG
Sbjct: 279 LYHLYLPAIYQDEQELHRFRLRFVEHLDRLIQETPLDTPEQRRLAFLGSSWGTPHLLQYQ 338
Query: 164 --------KRFMRLYSQ-----YTSWD---NTKDPERPLVIGYVSPDYFTHSVSYFIEAP 207
K++ +L + Y W+ P P+ +G+VS S S
Sbjct: 339 GYDDLELQKKYAQLVQRIVKASYPDWEYLPRQARPGDPIRVGFVSASMRACSYSRLSLGW 398
Query: 208 LVYHDYQN---YKVVVYSAVVKADAKTIRFREKVMKKGGIWRDI-YGIDEKKVAAMVRED 263
+ Y + ++V Y + D T ++R+ ++R I G +E A + +D
Sbjct: 399 VKYLKASSKWPFQVFAYHLDPRVDFLTEQYRQH----ADVFRHIPTGFEE--AARQILQD 452
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
++D+LV L + L + + + APVQ + +P T+GL TIDY ++ L +P +
Sbjct: 453 QLDVLVYLEIGLSPLMLQLASLRLAPVQCSTWAHPVTSGLSTIDYFLSSDLMEPENGQAH 512
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTP-------ALTNGFITFGSFNNLAKITPKVLQV 376
+ E L+RLP C+ PV P L + + + L K P+ +
Sbjct: 513 YSETLVRLPHLGTCFEK-----PVLPPQRRYRQDFGLPQEAVVYLTCQYLGKYLPQYDYL 567
Query: 377 WARILCAVPNSRLVVKCKPFCCDSVR--HRFLSTLEQLGLE-SLRVDLLPLILLNHDHMQ 433
+ I VP ++ V P R R S GL +LP L + D++
Sbjct: 568 FPAIARQVPRAQFVFLALPNAAIGQRFWQRLASIFSSYGLAVEDHCRILP-ALDHQDYLD 626
Query: 434 AYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNE 493
D+ LD++ ++G TT E++ G+P VT G ++L ++GL+ LIA +
Sbjct: 627 LNRCADVMLDSYGWSGGITTLEAIAAGLPVVTCPGRFLRGRHTYAILKRMGLELLIAPDL 686
Query: 494 DEYVQLALQLASD---VTALANLRMSLRDLMSKSPVC 527
Y +LA+QL +D +A RDL+ + C
Sbjct: 687 QRYEELAVQLGTDPQFRQQIAQQIQERRDLLLEDQDC 723
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98
G+ + +L A Y L+ P+ +L+ LG V +G+ + AA +I +AI NP
Sbjct: 106 GIQAQQAGDLRTAEAIYSQILAEFPDQPDALHLLGTVAQAKGEGEWAAALIAEAIELNPH 165
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133
A ++NLGV+Y G + A+ + Q L ++P +
Sbjct: 166 VALYHHNLGVVYESLGQLEKALSCHRQSLSLNPKA 200
>gi|424667172|ref|ZP_18104197.1| hypothetical protein A1OC_00730 [Stenotrophomonas maltophilia
Ab55555]
gi|401069841|gb|EJP78362.1| hypothetical protein A1OC_00730 [Stenotrophomonas maltophilia
Ab55555]
Length = 570
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 214/525 (40%), Gaps = 44/525 (8%)
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
+ + AL ++PN ++L LG V + G AA+++ +A A P + LG D
Sbjct: 42 QAARRALQLRPNHPEALARLGRVAWMAGAHGDAAKLLGQASALAPQHPGIALWLGHALED 101
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH--------RDWGK 164
A A AY + + P RL + + D A + +
Sbjct: 102 ADDAEGASAAYRRAHGLMPAEPYIAAQRLAWQRRLCDWQDLDTLAAQVRAAVASGQGVVE 161
Query: 165 RFMRLYSQYTSWDN---------------------TKDPERPLVIGYVSPDYFTHSVSYF 203
F L ++ + T P PL +G++S + H
Sbjct: 162 PFAFLSEDASAAEQLACAHTRALAVAASVRPLPPATVRPHGPLRVGFLSNGFGAHPTGLL 221
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
A + A+ + D IR R ++ D+ G+ AA +R
Sbjct: 222 TVALFEQLRRDPALQLHLFALNRDDGSRIRQR---LQAAAQLHDVTGLRHTDTAARIRAQ 278
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
ID+L +L G ++A +PAP+Q+ W+ YP T+G P +D + D+ A PP +
Sbjct: 279 GIDLLFDLRGWGGGGTPEVLAMRPAPLQLNWLAYPGTSGAPWMDAVVGDAFALPPALEPC 338
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTPALTN-GF----ITFGSFNNLAKITPKVLQVWA 378
+ E ++RLP F PS + P P N G + F FNN K+ P+ +
Sbjct: 339 YSERVLRLPRAF---QPSDNTRVLEPAPTRANCGLPAQGVVFCCFNNSYKLNPRSMGRAF 395
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
+L AVP S L + P D+ R + + GL+ R+ + L + ++ Y L
Sbjct: 396 AVLQAVPGSVLWLLSGPGQADA---RLRTAAQAAGLDPARLVFM-AKLPHPQYLARYQLA 451
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D+ LDT PY TT ++L+ G P +T G A V SL +G+ + ++ ++
Sbjct: 452 DLFLDTHPYNAHTTASDALWAGCPVLTCPGDTFAARVAGSLNHHLGMARMNVADDAAFIT 511
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
A L +D ALA LR L +S + D FA L + + +
Sbjct: 512 TASALGNDPAALAALRAELAQARERSGLFDMGGFARDLSALVQQL 556
>gi|66347873|ref|NP_001018115.1| O-linked N-acetylglucosamine transferase isoform 2 [Danio rerio]
gi|56967374|gb|AAW31871.1| O-GlcNAc transferase variant 2 [Danio rerio]
Length = 1052
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 322 NLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 381
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 382 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 441
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 442 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 492
Query: 172 ---------------------------------------QYTSWDNTKDPERPLVIGYVS 192
Y + K L +GY+S
Sbjct: 493 PSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASSGRLRVGYIS 552
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KVM + + D+ I
Sbjct: 553 SDFGNHPTSHLMQSIPGMHNSEKFEVFCYA--LSPDDGT-NFRVKVMAEAHHFIDLSQIP 609
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I ILV + G+T + + A +PAP+Q W+ YP T+G P +DY ++
Sbjct: 610 CNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLAYPGTSGAPFMDYIVS 669
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 670 DKATSPIEVAEQYSEKLAYMPNTFF 694
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS + + P + ++ + LGL +
Sbjct: 846 IVYCNFNQLYKIDPPTLQMWANILKRVPNSVIWLLRFPAVGEPNIQQYA---QNLGLPAS 902
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 903 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 961
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIA++ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 962 SQLTCLGCPELIAQSRQEYEDVAVKLGTDMEFLKKVRARVWKQRICSPLFNTKQYTMDLE 1021
Query: 538 STYRNMWHRYCKGDVPS-LKRMEMLQ 562
Y MW + G P L +M+ L+
Sbjct: 1022 KLYLQMWENHASGGKPDHLVKMQSLE 1047
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 254 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 313
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 314 PTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 373
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 374 YKEAIRISPTFADAYSN 390
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV+ Y+ AL +
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVF 347
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 348 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 407
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 408 YTRAIQINPAFADAHSN 424
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 60 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 119
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 120 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 179
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 180 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 223
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 124 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ Y +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLR 240
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 241 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 273
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 186 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 245
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 246 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 305
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 306 YNTALRLCPTHADSLNN 322
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 220 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 279
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 280 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQL 339
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 340 YRKALEVFPEFAAAHSN 356
>gi|428179456|gb|EKX48327.1| hypothetical protein GUITHDRAFT_105934 [Guillardia theta CCMP2712]
Length = 813
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 127/526 (24%), Positives = 229/526 (43%), Gaps = 72/526 (13%)
Query: 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEK 91
+E NLG++ D + AV ++ ++ + P +++ LG Y + D A +M +K
Sbjct: 296 SEGQANLGIVLSDLGDYKAAVVAFKESMKLNPLLAEAPKCLGDTYKHLNRWDEAIKMYKK 355
Query: 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN-AGQNRLLAMNYINEG 150
A++ PTY EA N+L + A + K D S A + LA + G
Sbjct: 356 ALSIRPTYWEALNDL-------------VHALQHTCKWDEWSTQFAKLQKQLARELESGG 402
Query: 151 HD---------------DKLFEAHRDWGKRFMRLYSQY------TSWDNTKDPERPLVIG 189
D++ R + R +RL T+ T ++ L +G
Sbjct: 403 QPLFVKPFHALVYPLSVDQMLLVARSYAARAIRLTRSLLPKPMKTTIALTS--KKKLRVG 460
Query: 190 YVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIY 249
+VS + HS+S+ + + H Q + V++ D IWR+
Sbjct: 461 WVSSNIGDHSLSHLMSSVFSSHG-QKIEAFVFALNGDNDPGD-----------PIWRNKS 508
Query: 250 GIDEKKVAAMVREDKIDILVELTGHTANNKLG--MMACQPAPVQVTWIGYPNTTGLPTID 307
G+ KV V + KI +L++L G+T + + A +P+ +Q +++G+ +TG P +
Sbjct: 509 GVQGAKV---VNKKKIHVLIDLVGYTGGGERANEVFASKPSELQTSYMGFCASTGAPYMQ 565
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLC--YTPSPEAGPVCPTPALTNGF-------I 358
+ I D + PP+ + E+L+ LP + C + P + + F I
Sbjct: 566 HMIADRVVAPPDFQSHFSEKLLLLPHSYFCNDHRQQPSWADIPSSRVSRKNFAELPAHGI 625
Query: 359 TFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESL 417
FN L KI P V Q W +IL P++ L +++ P +++R ++ G+ S
Sbjct: 626 LLACFNQLYKIDPLVFQTWMKILKQHPHALLWLLEFPPVAVENIRKEAIAR----GVSSD 681
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ + L ++++ +L D+ LDT T+ + L+ GVP +T++ V
Sbjct: 682 RL-VFGKTLPKREYLERGALADLFLDTPLVNAHTSATDILWAGVPMLTLSRESMISRVAA 740
Query: 478 SLLTKVGLKHLIAKNEDEYVQLA---LQLASDVTALANLRMSLRDL 520
SL G ++A N +EY Q+A +LA V+ L + + +R L
Sbjct: 741 SLCLAAGRPEMVAINLEEYEQVASALTELARQVSPLFDTNLWVRHL 786
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG+ ++ + A+V ++ + NP AEA LG YK + D+A++ Y+ ALSI+
Sbjct: 301 NLGIVLSDLGDYKAAVVAFKESMKLNPLLAEAPKCLGDTYKHLNRWDEAIKMYKKALSIR 360
Query: 63 PNFSQSLNNL 72
P + ++LN+L
Sbjct: 361 PTYWEALNDL 370
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
A+ +++ NP A N LG Y ++KA + Y+M + + P+ + NL +
Sbjct: 142 AVQELQISVKLNPTFVAAYNQLGNAYSGLQKINKAEDAYKMVVKLSPSAPEGHANLARML 201
Query: 77 TVQGKMDAAAEMIEKAIAANPTYAEA-YNNLGVLYRDAGSISLAIDAYEQCL 127
+G + + I+KAI+++P + Y+ L Y+++G+I +A A L
Sbjct: 202 QARGDTSSGVKAIQKAISSSPVQNPSLYHELANAYKNSGNIKMAQRAIRVLL 253
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY--TV 78
Y A P + A N G+ ++ D+A+ ++ A+ + P +S++ +G +
Sbjct: 73 YMRAIELYPDSSLALYNYGLTQMNQHRHDEALRFFKDAIKLVPTYSEAYFGVGSTLYDSA 132
Query: 79 QGKMDAAAEMIEK---AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN 135
+G A+ +++ ++ NPT+ AYN LG Y I+ A DAY+ +K+ P +
Sbjct: 133 KGNKKVLADAVQELQISVKLNPTFVAAYNQLGNAYSGLQKINKAEDAYKMVVKLSPSAPE 192
Query: 136 AGQN 139
N
Sbjct: 193 GHAN 196
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG-VLYRD 112
CY A+ + P+ S +L N G+ Q + D A + AI PTY+EAY +G LY
Sbjct: 72 CYMRAIELYPDSSLALYNYGLTQMNQHRHDEALRFFKDAIKLVPTYSEAYFGVGSTLYDS 131
Query: 113 A-GSISLAIDAYEQ---CLKIDPD---SRNAGQNRLLAMNYINEGHD 152
A G+ + DA ++ +K++P + N N + IN+ D
Sbjct: 132 AKGNKKVLADAVQELQISVKLNPTFVAAYNQLGNAYSGLQKINKAED 178
>gi|209526542|ref|ZP_03275068.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|209493048|gb|EDZ93377.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
Length = 728
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 138/612 (22%), Positives = 268/612 (43%), Gaps = 81/612 (13%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACN--NLGVIYKDRDNLDKAVECYQMALS 60
NL A +M + A++ + A + + + N G ++ L++A+ ++ A+
Sbjct: 124 NLARALRQMGRESEALIVEQKANQIHSLTGGSVHLYNQGNQLFNQGKLEEAIALWKQAIV 183
Query: 61 IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
PN +++ LG+V+ QG+ A +EKAI P A+ N+ +YRD+ ++ A
Sbjct: 184 ADPNLAEAYCQLGIVHRHQGQPQEAIPFLEKAIELKPNLVAAHQNICGIYRDSSDLAAAR 243
Query: 121 DAYEQCLK----IDP---------------------------DSRNAG------------ 137
+A ++ LK IDP +S+ G
Sbjct: 244 NAVDRYLKNCSSIDPIMTAIYAVSICQVSGLNAVALPRFLQLESQLPGLLAHTKPVEIKS 303
Query: 138 --QNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTS---------WDNTKDPERPL 186
N L A+ Y+ + + K ++ R G R++ L S ++ + N P + +
Sbjct: 304 LYANLLFALPYLRDDLE-KNYKLQRLIGDRYVSLISPTSTPPRIQTTKGFGNIPSP-KTV 361
Query: 187 VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVY-SAVVKADAKTIRFREKVMKKGGIW 245
IG +S ++ HSV + + N ++ +Y S D +T F + K
Sbjct: 362 KIGILSKNFCRHSVGWCSADVIKELAALNTEIYLYWSDRPIRDKQTPVFEQVAHKVFAPQ 421
Query: 246 RDIYGI-DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLP 304
G+ + +++ +R+D+IDIL++L + ++A +PA ++W+G+ ++ +
Sbjct: 422 NFPQGLPNPQEIVNAIRQDQIDILLDLDSLSVQINTEVLAQKPARFCISWLGF-DSPQIA 480
Query: 305 TIDYRITDSLADPPETKQKHVEELIRLPECFLCYTP----SPEAGPVCPTPALTNGFITF 360
+ +Y I D PP + + E+LIR+P+ F+ + S + + ++ + +
Sbjct: 481 SDNYFIGDHYTHPPGRESYYTEKLIRMPQTFMAVSGFQRVSADPNTLRQAYRISRDQVVY 540
Query: 361 GSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDS--VRHRFLSTLEQLGLESLR 418
K P +++ IL VP+S LV K D+ +R + + + +G+ R
Sbjct: 541 LCVAPGRKFNPDLVKAQVNILKQVPDSILVHKA---LGDTQIIRETYAAACKAIGVGQHR 597
Query: 419 VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVS 478
+ + +H + Y L D+ LD++PY G T + E+L+ P VT GS +G S
Sbjct: 598 IKQISRFATEEEHRKIYMLADVLLDSYPYNGGTHSLEALWFNTPLVTRRGSQFLSRMGYS 657
Query: 479 LLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKS-------PVCDGQN 531
L VG++ IA + +EY ++L + LR S+R + S P+ + +
Sbjct: 658 FLKGVGVEMGIADSWEEYQNCGIRLGIE----PELRQSIRQQLMASKKSENLAPLWNPKA 713
Query: 532 FALGLESTYRNM 543
A L S ++ +
Sbjct: 714 LAKNLYSQFQQL 725
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 39/175 (22%)
Query: 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60
M N+ G++ + AI Y A F+P+ +A NLG ++ + L+ A++ YQ A++
Sbjct: 57 MGNVSQGRGQI---EEAIRCYAKALEFDPNLPQAHANLGSMFYKQGKLESAIDSYQKAIA 113
Query: 61 IKP-------NFSQSLNNLG-------------VVYTV----------------QGKMDA 84
+KP N +++L +G ++++ QGK++
Sbjct: 114 LKPDLTAVYVNLARALRQMGRESEALIVEQKANQIHSLTGGSVHLYNQGNQLFNQGKLEE 173
Query: 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A + ++AI A+P AEAY LG+++R G AI E+ +++ P+ A QN
Sbjct: 174 AIALWKQAIVADPNLAEAYCQLGIVHRHQGQPQEAIPFLEKAIELKPNLVAAHQN 228
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
++D AI + A P+ +G + + R +++A+ CY AL PN Q+ NL
Sbjct: 32 EYDQAIAACQRALELKPNWPPVYVTMGNVSQGRGQIEEAIRCYAKALEFDPNLPQAHANL 91
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
G ++ QGK+++A + +KAIA P Y NL R G S A+
Sbjct: 92 GSMFYKQGKLESAIDSYQKAIALKPDLTAVYVNLARALRQMGRESEAL 139
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 49 DKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108
D+A+ Q AL +KPN+ +G V +G+++ A KA+ +P +A+ NLG
Sbjct: 34 DQAIAACQRALELKPNWPPVYVTMGNVSQGRGQIEEAIRCYAKALEFDPNLPQAHANLGS 93
Query: 109 LYRDAGSISLAIDAYEQCLKIDPD 132
++ G + AID+Y++ + + PD
Sbjct: 94 MFYKQGKLESAIDSYQKAIALKPD 117
>gi|66347871|ref|NP_001018116.1| O-linked N-acetylglucosamine transferase isoform 3 [Danio rerio]
gi|56967376|gb|AAW31872.1| O-GlcNAc transferase variant 3 [Danio rerio]
Length = 1046
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 452 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 502
Query: 172 ---------------------------------------QYTSWDNTKDPERPLVIGYVS 192
Y + K L +GY+S
Sbjct: 503 PSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASSGRLRVGYIS 562
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KVM + + D+ I
Sbjct: 563 SDFGNHPTSHLMQSIPGMHNSEKFEVFCYA--LSPDDGT-NFRVKVMAEAHHFIDLSQIP 619
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I ILV + G+T + + A +PAP+Q W+ YP T+G P +DY ++
Sbjct: 620 CNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLAYPGTSGAPFMDYIVS 679
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 680 DKATSPIEVAEQYSEKLAYMPNTFF 704
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS + + P + ++ + LGL +
Sbjct: 840 IVYCNFNQLYKIDPPTLQMWANILKRVPNSVIWLLRFPAVGEPNIQQYA---QNLGLPAS 896
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 897 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 955
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIA++ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 956 SQLTCLGCPELIAQSRQEYEDVAVKLGTDMEFLKKVRARVWKQRICSPLFNTKQYTMDLE 1015
Query: 538 STYRNMWHRYCKGDVPS-LKRMEMLQ 562
Y MW + G P L +M+ L+
Sbjct: 1016 KLYLQMWENHASGGKPDHLVKMQSLE 1041
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV+ Y+ AL +
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ Y +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|62821820|ref|NP_001017359.1| O-linked N-acetylglucosamine transferase isoform 1 [Danio rerio]
gi|56967372|gb|AAW31870.1| O-GlcNAc transferase variant 1 [Danio rerio]
Length = 1062
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 452 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 502
Query: 172 ---------------------------------------QYTSWDNTKDPERPLVIGYVS 192
Y + K L +GY+S
Sbjct: 503 PSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASSGRLRVGYIS 562
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KVM + + D+ I
Sbjct: 563 SDFGNHPTSHLMQSIPGMHNSEKFEVFCYA--LSPDDGT-NFRVKVMAEAHHFIDLSQIP 619
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I ILV + G+T + + A +PAP+Q W+ YP T+G P +DY ++
Sbjct: 620 CNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLAYPGTSGAPFMDYIVS 679
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 680 DKATSPIEVAEQYSEKLAYMPNTFF 704
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS + + P + ++ + LGL +
Sbjct: 856 IVYCNFNQLYKIDPPTLQMWANILKRVPNSVIWLLRFPAVGEPNIQQYA---QNLGLPAS 912
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 913 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 971
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIA++ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 972 SQLTCLGCPELIAQSRQEYEDVAVKLGTDMEFLKKVRARVWKQRICSPLFNTKQYTMDLE 1031
Query: 538 STYRNMWHRYCKGDVPS-LKRMEMLQ 562
Y MW + G P L +M+ L+
Sbjct: 1032 KLYLQMWENHASGGKPDHLVKMQSLE 1057
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV+ Y+ AL +
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ Y +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|381159646|ref|ZP_09868878.1| hypothetical protein Thi970DRAFT_03404, partial [Thiorhodovibrio
sp. 970]
gi|380877710|gb|EIC19802.1| hypothetical protein Thi970DRAFT_03404, partial [Thiorhodovibrio
sp. 970]
Length = 211
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFL 406
+ P PA NG+ITFGSFNN AK +V +WAR+L AVP SRL++K + F +++
Sbjct: 9 LSPPPAERNGWITFGSFNNTAKYHAEVFALWARVLNAVPGSRLILKWRTFNDAALKAVVR 68
Query: 407 STLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466
+ G+ + R++L + + +Q Y+ +DI+LD FP+ G T+CE+L+MGVP +T
Sbjct: 69 EVFQGQGIAAERIELRG-PSFHKEVLQQYADIDIALDPFPFTGGLTSCEALWMGVPVITW 127
Query: 467 AGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPV 526
S +LL ++GL K+ D +V+LA LA+D L LR LR M S +
Sbjct: 128 PQSRVVSRQTHALLHQIGLPECSVKDPDAFVRLAGDLAADPARLHELRQGLRARMQGSTL 187
Query: 527 CDGQNFALGLE 537
D F GLE
Sbjct: 188 MDAVGFTRGLE 198
>gi|428178657|gb|EKX47531.1| hypothetical protein GUITHDRAFT_69463, partial [Guillardia theta
CCMP2712]
Length = 676
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 233/549 (42%), Gaps = 51/549 (9%)
Query: 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76
AI Y H P A+ +G + D+A E Y A +I PN + NN+G +
Sbjct: 145 AIAEYMKCIHREPLHADCYCGMGNAFVRIGKYDEAQEAYTAAANINPNEAGYSNNIGNLL 204
Query: 77 TVQGKMDAAAEMI-----EKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
+ + A+ + + +++ + TYA+ Y NLG Y A E + I P
Sbjct: 205 VRHHRFNHTAQQLAIKYLKNSVSLDGTYADGYFNLGEAYSAVSQYDFASRRREYDVTICP 264
Query: 132 DSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNTKDPERPL----- 186
+ + L ++N + + EAH + F+R + ++ P PL
Sbjct: 265 NPLESLSYEL-SLNVLRH-----IAEAHGQEARTFVRNFQRF--------PLNPLPMTDG 310
Query: 187 --VIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYS-------AVVKADAKTIRFREK 237
+GYVS + V + HD ++ +S V + + + K
Sbjct: 311 VLRVGYVSIELRDRPVGKDMVYAFRAHDPSKVSLICFSLNPNPREGVDSEETLSWHRKMK 370
Query: 238 VMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLG-MMACQPAPVQVTWIG 296
KGG + D+ + A+ + ++ +L+ L G T+ + + PAP+Q+++ G
Sbjct: 371 AECKGG-YLDLSSTAFYETASAINREQPHVLINLDGWTSAPLINEIFILSPAPIQLSFKG 429
Query: 297 YPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECF----------LCYTPSPEAGP 346
+P TTG+ + D PPE + +VE L+ +P + P + P
Sbjct: 430 FPGTTGIAEHHGIVADRKVIPPEFSEFYVERLVYMPHSYHYNGHDSLYAHLAELDPSSWP 489
Query: 347 VCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFL 406
PA +FN KITPKV Q+W +L VP+S+L + ++ + L
Sbjct: 490 SQFFPADAIDSFILCNFNQFYKITPKVWQLWMHLLGQVPDSKLWLLS---WNEAGKQSLL 546
Query: 407 STLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466
+Q G+ S ++ + H+ + + D+ +DT PYA T ++L+ G+P ++
Sbjct: 547 RYAKQSGIPSDKL-IFTTFFEEKWHVASKANCDLFVDTRPYAAHGTAADALFAGLPIISA 605
Query: 467 AGSVHAHNVGVSLLTKVGLKHL-IAKNEDEYVQLALQLA-SDVTALANLRMSLRDLMSKS 524
G A V +SL G+ L IA+N+ +YV+LA A L +L+ +++ KS
Sbjct: 606 PGESMASRVSLSLSLASGIGDLFIARNDQDYVRLAQHFALKGRKTLRSLKQAMQRSAIKS 665
Query: 525 PVCDGQNFA 533
D +A
Sbjct: 666 AAFDSARWA 674
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61
Y+ G+A+ + + D A +E + A NL ++ + N+ KA E L +
Sbjct: 62 YHAGMAHLQAGRLDDAKFRWEKCLELQQDHSVAMFNLATLFAETGNVVKATEMMHKVLQL 121
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P + L ++ Q K A K I P +A+ Y +G + G A +
Sbjct: 122 QPEDPDNYKTLAILLFKQDKNQEAIAEYMKCIHREPLHADCYCGMGNAFVRIGKYDEAQE 181
Query: 122 AYEQCLKIDPDSRNAGQN 139
AY I+P+ N
Sbjct: 182 AYTAAANINPNEAGYSNN 199
>gi|151554489|gb|AAI49783.1| OGT protein [Bos taurus]
Length = 908
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 194 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 253
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 254 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 313
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 314 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 373
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 374 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 433
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 434 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 490
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 491 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 550
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 551 AEQYSEKLAYMPHTFF 566
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 704 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 760
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 761 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 819
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAKN EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 820 SQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 879
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 880 RLYLQMWEHYAAGNKP 895
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 126 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 185
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 186 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 245
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 246 YKEAIRISPTFADAYSN 262
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 58 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 117
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 118 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 177
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 178 YNTALRLCPTHADSLNN 194
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A++ NNL I +++ N+++AV Y+ AL + P F+ + +NL V QG
Sbjct: 178 YNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 237
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
K+ A ++AI +PT+A+AY+N+G ++ + A+ Y + ++I+P +A N
Sbjct: 238 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 296
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 92 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 151
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 152 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 211
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 212 YRKALEVFPEFAAAHSN 228
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
CY A+ +PNF+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A
Sbjct: 41 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEA 100
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
A+ AY + L + P+ N LA Y +G D + +R
Sbjct: 101 RIFDRAVAAYLRALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 145
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P+ A A +NLG ++ + + A+ ++ A+++ PNF + NLG V
Sbjct: 42 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 101
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
D A +A++ +P +A + NL +Y + G I LAID Y + +++ P
Sbjct: 102 IFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQP 152
>gi|319443727|pdb|3PE3|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
gi|319443728|pdb|3PE3|B Chain B, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
gi|319443729|pdb|3PE3|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
gi|319443730|pdb|3PE3|D Chain D, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
gi|319443731|pdb|3PE4|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
gi|319443733|pdb|3PE4|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
gi|357380651|pdb|3TAX|A Chain A, A Neutral Diphosphate Mimic Crosslinks The Active Site Of
Human O- Glcnac Transferase
gi|357380653|pdb|3TAX|C Chain C, A Neutral Diphosphate Mimic Crosslinks The Active Site Of
Human O- Glcnac Transferase
gi|409973752|pdb|4AY5|A Chain A, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
gi|409973753|pdb|4AY5|B Chain B, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
gi|409973754|pdb|4AY5|C Chain C, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
gi|409973755|pdb|4AY5|D Chain D, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
gi|409973760|pdb|4AY6|A Chain A, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
gi|409973761|pdb|4AY6|B Chain B, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
gi|409973762|pdb|4AY6|C Chain C, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
gi|409973763|pdb|4AY6|D Chain D, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
gi|410563064|pdb|4GYW|A Chain A, Crystal Structure Of Human O-Glcnac Transferase In Complex
With Udp And A Glycopeptide
gi|410563066|pdb|4GYW|C Chain C, Crystal Structure Of Human O-Glcnac Transferase In Complex
With Udp And A Glycopeptide
gi|410563068|pdb|4GYY|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac And A Peptide Substrate
gi|410563070|pdb|4GYY|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac And A Peptide Substrate
gi|410563101|pdb|4GZ3|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With Udp
And A Thioglycopeptide
gi|410563103|pdb|4GZ3|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With Udp
And A Thioglycopeptide
gi|410563105|pdb|4GZ5|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
gi|410563106|pdb|4GZ5|B Chain B, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
gi|410563107|pdb|4GZ5|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
gi|410563108|pdb|4GZ5|D Chain D, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
gi|410563109|pdb|4GZ6|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
gi|410563110|pdb|4GZ6|B Chain B, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
gi|410563111|pdb|4GZ6|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
gi|410563112|pdb|4GZ6|D Chain D, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
Length = 723
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 14 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 73
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 74 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 133
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 134 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 193
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 194 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 253
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 254 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 310
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 311 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 370
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 371 AEQYSEKLAYMPHTFF 386
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 524 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 580
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 581 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 639
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAKN EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 640 SQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELE 699
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 700 RLYLQMWEHYAAGNKP 715
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 66/111 (59%)
Query: 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88
P A++ NNL I +++ N+++AV Y+ AL + P F+ + +NL V QGK+ A
Sbjct: 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 65
Query: 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
++AI +PT+A+AY+N+G ++ + A+ Y + ++I+P +A N
Sbjct: 66 YKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 116
>gi|2266994|gb|AAB63466.1| O-linked GlcNAc transferase [Homo sapiens]
gi|6911265|gb|AAF31458.1| HRNT1 [Homo sapiens]
gi|18250916|emb|CAC86129.1| UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl
transferase [Homo sapiens]
gi|119625690|gb|EAX05285.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_a [Homo
sapiens]
Length = 920
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 206 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 265
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 266 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 325
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 326 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 385
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 386 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 445
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 446 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 502
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 503 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 562
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 563 AEQYSEKLAYMPHTFF 578
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 716 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 772
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 773 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 831
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAKN EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 832 SQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELE 891
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 892 RLYLQMWEHYAAGNKP 907
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 138 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 197
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 198 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 257
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 258 YKEAIRISPTFADAYSN 274
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 70 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 129
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 130 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 189
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 190 YNTALRLCPTHADSLNN 206
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A++ NNL I +++ N+++AV Y+ AL + P F+ + +NL V QG
Sbjct: 190 YNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 249
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
K+ A ++AI +PT+A+AY+N+G ++ + A+ Y + ++I+P +A N
Sbjct: 250 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 308
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 104 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 163
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 164 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 223
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 224 YRKALEVFPEFAAAHSN 240
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
CY A+ +PNF+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A
Sbjct: 53 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEA 112
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
A+ AY + L + P+ N LA Y +G D + +R
Sbjct: 113 RIFDRAVAAYLRALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 157
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P+ A A +NLG ++ + + A+ ++ A+++ PNF + NLG V
Sbjct: 54 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 113
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
D A +A++ +P +A + NL +Y + G I LAID Y + +++ P
Sbjct: 114 IFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQP 164
>gi|66347879|ref|NP_001018117.1| O-linked N-acetylglucosamine transferase isoform 4 [Danio rerio]
gi|56967378|gb|AAW31873.1| O-GlcNAc transferase variant 4 [Danio rerio]
Length = 1036
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 322 NLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 381
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 382 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 441
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L S
Sbjct: 442 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRL 492
Query: 172 ---------------------------------------QYTSWDNTKDPERPLVIGYVS 192
Y + K L +GY+S
Sbjct: 493 PSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASSGRLRVGYIS 552
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KVM + + D+ I
Sbjct: 553 SDFGNHPTSHLMQSIPGMHNSEKFEVFCYA--LSPDDGT-NFRVKVMAEAHHFIDLSQIP 609
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D I ILV + G+T + + A +PAP+Q W+ YP T+G P +DY ++
Sbjct: 610 CNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLAYPGTSGAPFMDYIVS 669
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 670 DKATSPIEVAEQYSEKLAYMPNTFF 694
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS + + P + ++ + LGL +
Sbjct: 830 IVYCNFNQLYKIDPPTLQMWANILKRVPNSVIWLLRFPAVGEPNIQQYA---QNLGLPAS 886
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 887 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 945
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIA++ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 946 SQLTCLGCPELIAQSRQEYEDVAVKLGTDMEFLKKVRARVWKQRICSPLFNTKQYTMDLE 1005
Query: 538 STYRNMWHRYCKGDVPS-LKRMEMLQ 562
Y MW + G P L +M+ L+
Sbjct: 1006 KLYLQMWENHASGGKPDHLVKMQSLE 1031
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 254 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 313
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 314 PTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 373
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 374 YKEAIRISPTFADAYSN 390
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV+ Y+ AL +
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVF 347
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 348 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 407
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 408 YTRAIQINPAFADAHSN 424
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 60 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 119
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 120 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 179
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 180 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 223
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 124 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ Y +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLR 240
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 241 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 273
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 186 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 245
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 246 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 305
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 306 YNTALRLCPTHADSLNN 322
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 220 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 279
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 280 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQL 339
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 340 YRKALEVFPEFAAAHSN 356
>gi|218248286|ref|YP_002373657.1| hypothetical protein PCC8801_3536 [Cyanothece sp. PCC 8801]
gi|218168764|gb|ACK67501.1| conserved hypothetical protein [Cyanothece sp. PCC 8801]
Length = 731
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 169/364 (46%), Gaps = 12/364 (3%)
Query: 189 GYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKVMKKGGIWRD 247
GY++ +SV + YH+ + +++ +Y D T FR KV RD
Sbjct: 371 GYIASTLRKNSVGWLSRWLFHYHNREQFQIGLYLMNQPEDELTQNWFRNKVDYTYNFGRD 430
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
I +++ ++ D +DILV+L T N ++ +PA +QV+W+GY +++GL T+D
Sbjct: 431 I-----QEILQQIQADDLDILVDLDSLTNNVTCQVLVFKPAKIQVSWLGY-DSSGLSTLD 484
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN---GFITFGSFN 364
Y I+D P + + E + RLP+ +L E G T N I + +
Sbjct: 485 YFISDPYVLPENAQDYYQENIWRLPQTYLA-VDGFEIGEQTLTREQLNIPEDAIIYWTGQ 543
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
N K P ++ +IL VPNS L++K + ++ F + + + R LP+
Sbjct: 544 NGFKRHPDMINCQMQILQEVPNSYLLIKGIG-NDEKIQQLFKTIALKYQVSPDRFRFLPI 602
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
+ H + DI LDT+PY G TTT E L+MG+P VT G A + +T VG
Sbjct: 603 VADELTHRANLQIADIVLDTYPYNGATTTLEVLWMGIPLVTRVGEQFAARNSYTFMTNVG 662
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
L IA +EY+ +QL + +R L+ SPV + + F +E Y+ M
Sbjct: 663 LTEGIAWTNEEYIDWGIQLGKNEALRQQVREKLQQSRQTSPVWNAKIFTQEMEKAYQQMV 722
Query: 545 HRYC 548
Y
Sbjct: 723 KNYL 726
>gi|190572912|ref|YP_001970757.1| TPR domain-containing protein [Stenotrophomonas maltophilia K279a]
gi|190010834|emb|CAQ44443.1| putative TPR domain protein [Stenotrophomonas maltophilia K279a]
Length = 570
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 213/525 (40%), Gaps = 44/525 (8%)
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
+ + AL ++PN ++L LG V + G AA+++ +A A P + LG D
Sbjct: 42 QAARRALQLRPNHPEALARLGRVAWMAGAHGDAAKLLGQASALAPQHPGIALWLGHALED 101
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH--------RDWGK 164
A A AY + + P RL + + D A + +
Sbjct: 102 ADDAEGASAAYRRAHGLMPAEPYIAAQRLAWQRRLCDWQDLDTLAAQVRAAVASGQGVVE 161
Query: 165 RFMRLYSQYTSWDN---------------------TKDPERPLVIGYVSPDYFTHSVSYF 203
F L ++ + T P PL +G++S + H
Sbjct: 162 PFAFLSEDASAAEQLACAHTRALAVAASVRPLPPATVRPHGPLRVGFLSNGFGAHPTGLL 221
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
A + A+ + D IR R ++ D+ G+ AA +R
Sbjct: 222 TVALFEQLRRDPALQLHLFALNRDDGSRIRQR---LQAAAQLHDVAGLRHADTAARIRAQ 278
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
ID+L +L G ++A +PAP+Q+ W+ YP T+G P +D + D+ A PP +
Sbjct: 279 GIDLLFDLRGWGGGGTPEVLAMRPAPLQLNWLAYPGTSGAPWMDAVVGDAFALPPALEPC 338
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITFGSFNNLAKITPKVLQVWA 378
+ E ++RLP F PS + P P L + F FNN K+ P+ +
Sbjct: 339 YSERVLRLPRAF---QPSDNTRVLEPAPTRADCGLPAQGVVFCCFNNSYKLNPRSMGRAF 395
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
+L AVP S L + P D+ R + + GL+ R+ + L + ++ Y L
Sbjct: 396 AVLQAVPGSVLWLLSGPGQADA---RLRTAAQAAGLDPARLVFM-AKLPHPQYLARYPLA 451
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D+ LDT PY TT ++L+ G P +T G A V SL +GL + ++ ++
Sbjct: 452 DLFLDTHPYNAHTTASDALWAGCPVLTCPGDTFAARVAGSLNHHLGLARMNVADDAAFIT 511
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
A L +D ALA LR L +S + D FA L + + +
Sbjct: 512 TASALGNDPAALAALRAELAQARERSRLFDMDGFARDLSTLVQQL 556
>gi|410914070|ref|XP_003970511.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Takifugu rubripes]
Length = 1036
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 171/385 (44%), Gaps = 63/385 (16%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + AI Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 322 NLANIKREQGNIEEAIQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 381
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 382 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 441
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRLYS----------- 171
Y LK+ PD +A Y N H ++ D+ +R +L +
Sbjct: 442 YRTALKLKPDFPDA---------YCNLAHCLQIVCDWTDYDERMKKLVTIVADQLDKNRL 492
Query: 172 ------------------------------------QYTSWDNTKDPERP---LVIGYVS 192
++++ KD + L +GYVS
Sbjct: 493 PSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINALHKPAYEHPKDLKASGGRLRVGYVS 552
Query: 193 PDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID 252
D+ H S+ +++ H+ + ++V Y+ + D T FR KV+ + + D+ I
Sbjct: 553 SDFGNHPTSHLMQSIPGMHNPEKFEVFCYA--LSPDDST-NFRVKVVAEAHHFVDLSQIP 609
Query: 253 -EKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRIT 311
K A + +D + ILV + G+T + + A +PAPVQ W+GYP T+G P +DY I+
Sbjct: 610 CNGKAADRIHQDGVHILVNMNGYTKGARNELFALRPAPVQSMWLGYPGTSGAPFMDYIIS 669
Query: 312 DSLADPPETKQKHVEELIRLPECFL 336
D P E +++ E+L +P F
Sbjct: 670 DKETSPIEVAEQYSEKLAYMPHTFF 694
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%)
Query: 290 VQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCP 349
+QVT G+ + GL T +I++ A EE++R + T + G
Sbjct: 785 IQVTXNGFTVSNGLATT--QISNKAATG--------EEVLRT----IVVTTRSQYG---- 826
Query: 350 TPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTL 409
L I + +FN L KI P LQ+WA IL VPNS L + P + ++
Sbjct: 827 ---LPEDSIVYCNFNQLYKIDPPTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA--- 880
Query: 410 EQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS 469
+ +GL + RV P + +H++ L D+ LDT G TT + L+ G P VTM G
Sbjct: 881 QNMGLPASRVIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGE 939
Query: 470 VHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDG 529
A V S L +G L+A++ EY +A++L SD+ L +R + SP+ +
Sbjct: 940 TLASRVATSQLNCLGCPELVAQSRQEYEDIAVKLGSDMEYLKMVRARVWRQRICSPLFNT 999
Query: 530 QNFALGLESTYRNMWHRYCKGDVP 553
+ + + LE Y MW + G+ P
Sbjct: 1000 KQYTMELEKLYLRMWEHHSNGNKP 1023
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ N+ +A ECY AL +
Sbjct: 254 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC 313
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A ++ KA+ P +A A++NL + + G + A+
Sbjct: 314 PTHADSLNNLANIKREQGNIEEAIQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 373
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 374 YKEAIRISPTFADAYSN 390
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 74/137 (54%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++A++ Y+ AL +
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAIQLYRKALEVF 347
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 348 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 407
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 408 YTRAIQINPAFADAHSN 424
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 60 RLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 119
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 120 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 179
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 180 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 223
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 124 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ Y +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLR 240
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 241 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 273
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 220 NLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 279
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I AI
Sbjct: 280 PHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAIQL 339
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 340 YRKALEVFPEFAAAHSN 356
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 186 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLS 245
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G++S A +
Sbjct: 246 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEEC 305
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 306 YNTALRLCPTHADSLNN 322
>gi|13775066|gb|AAK39123.1|AF363030_1 UDP-N-acetylglucosaminyltransferase [Mus musculus]
Length = 1046
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 452 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHHSM 511
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 512 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 571
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 572 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 628
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 629 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 688
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 689 AEQYSEKLAYMPHTFF 704
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 842 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 898
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 899 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 957
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 958 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKRIRGKVWKQRISSPLFNTKQYTMELE 1017
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1018 RLYLQMWEHYAAGNKP 1033
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|257060387|ref|YP_003138275.1| O-linked N-acetylglucosamine transferase [Cyanothece sp. PCC 8802]
gi|256590553|gb|ACV01440.1| O-linked N-acetylglucosamine transferase SPINDLY family-like
protein [Cyanothece sp. PCC 8802]
Length = 731
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 170/364 (46%), Gaps = 12/364 (3%)
Query: 189 GYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIR-FREKVMKKGGIWRD 247
GY++ +SV + YH+ + +++ +Y D T FR KV RD
Sbjct: 371 GYIASTLRKNSVGWLSRWLFHYHNREQFQIGLYLMNQPEDELTQNWFRNKVDYTYNFGRD 430
Query: 248 IYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTID 307
I +++ ++ D +DILV+L T N ++ +PA +QV+W+GY +++GL T+D
Sbjct: 431 I-----QEILQQIQADDLDILVDLDSLTNNVTCQVLVFKPAKIQVSWLGY-DSSGLSTLD 484
Query: 308 YRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAGPVCPTPALTN---GFITFGSFN 364
Y I+D P + + E + RLP+ +L E G T N I + +
Sbjct: 485 YFISDPYVLPENAQDYYQENIWRLPQTYLA-VDGFEIGEQTLTREQLNIPEDAIIYWTGQ 543
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
N K P ++ +IL VPNS L++K + ++ F + + + R+ LP+
Sbjct: 544 NGFKRHPDMINCQMQILQDVPNSYLLIKGIG-NDEKIQQLFKTIALKYQVSPDRLRFLPI 602
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
+ H + DI LDT+PY G TTT E L+MG+P VT G A + +T VG
Sbjct: 603 VADELTHRANLQIADIVLDTYPYNGATTTLEVLWMGIPLVTRVGEQFAARNSYTFMTNVG 662
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544
L IA +EY+ +QL + +R L+ SPV + + F +E Y+ M
Sbjct: 663 LTEGIAWTNEEYIDWGIQLGKNEALRQQVREKLQQSRQTSPVWNAKIFTQEMEKAYQKMV 722
Query: 545 HRYC 548
Y
Sbjct: 723 KNYL 726
>gi|444707375|gb|ELW48655.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Tupaia chinensis]
Length = 1007
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 293 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 352
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 353 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 412
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 413 YRTALKLKPDFPDAYCNLAHCLQIVCNWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 472
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 473 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 532
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 533 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 589
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 590 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 649
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 650 AEQYSEKLAYMPHTFF 665
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 803 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 859
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 860 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 918
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAKN EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 919 SQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 978
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 979 RLYLQMWEHYAAGNKP 994
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 225 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 284
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 285 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 344
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 345 YKEAIRISPTFADAYSN 361
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 259 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 318
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 319 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 378
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 379 YTRAIQINPAFADAHSN 395
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 191 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 250
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 251 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 310
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 311 YRKALEVFPEFAAAHSN 327
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 31/177 (17%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEMI-----------------------------EKAIAANPTYAEAY 103
G M+ A + KA+ +P + +AY
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAVTLDPNFLDAY 189
Query: 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
NLG + ++A A+ AY + L + P+ N LA Y +G D + +R
Sbjct: 190 INLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 244
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A +P+ +A NLG + K+ D+AV Y ALS+ PN + NL VY QG +D
Sbjct: 178 AVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLID 237
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A + +AI P + +AY NL ++ GS++ A D Y L++ P ++ N
Sbjct: 238 LAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNN 293
>gi|417412996|gb|JAA52852.1| Putative o-linked n-acetylglucosamine transferase ogt, partial
[Desmodus rotundus]
Length = 874
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 160 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 219
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 220 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 279
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 280 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 339
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 340 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 399
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 400 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 456
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 457 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 516
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 517 AEQYSEKLAYMPHTFF 532
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 670 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 726
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 727 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 785
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 786 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 845
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 846 RLYLQMWEHYAAGNKP 861
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 92 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 151
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 152 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 211
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 212 YKEAIRISPTFADAYSN 228
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 24 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 83
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 84 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 143
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 144 YNTALRLCPTHADSLNN 160
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 126 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 185
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 186 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 245
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 246 YTRAIQINPAFADAHSN 262
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 58 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 117
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 118 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 177
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 178 YRKALEVFPEFAAAHSN 194
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 54 CYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113
CY A+ +PNF+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A
Sbjct: 7 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEA 66
Query: 114 GSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
A+ AY + L + P+ N LA Y +G D + +R
Sbjct: 67 RIFDRAVAAYLRALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 111
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P+ A A +NLG ++ + + A+ ++ A+++ PNF + NLG V
Sbjct: 8 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 67
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131
D A +A++ +P +A + NL +Y + G I LAID Y + +++ P
Sbjct: 68 IFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQP 118
>gi|301791309|ref|XP_002930623.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Ailuropoda melanoleuca]
gi|410988810|ref|XP_004000670.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Felis catus]
gi|355708635|gb|AES03331.1| O-linked N-acetylglucosamine transferase [Mustela putorius furo]
Length = 1046
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRL------LAM 144
Y LK+ PD +A +NRL +M
Sbjct: 452 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 511
Query: 145 NY-INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
Y ++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 512 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 571
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 572 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 628
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 629 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 688
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 689 AEQYSEKLAYMPHTFF 704
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 842 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 898
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 899 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 957
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAKN EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 958 SQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1017
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1018 RLYLQMWEHYAAGNKP 1033
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|74007670|ref|XP_849392.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Canis lupus familiaris]
Length = 1046
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 452 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 511
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 512 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 571
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 572 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 628
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 629 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 688
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 689 AEQYSEKLAYMPHTFF 704
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 842 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 898
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 899 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 957
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAKN +Y +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 958 SQLTCLGCLELIAKNRQDYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1017
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1018 RLYLQMWEHYAAGNKP 1033
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|327287036|ref|XP_003228235.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Anolis carolinensis]
Length = 1066
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 452 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 511
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K E L +GYVS D+ H S
Sbjct: 512 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKASEGRLRVGYVSSDFGNHPTS 571
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ + K A +
Sbjct: 572 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEAKHFVDLSQVPCNGKAADRI 628
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 629 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDKETSPFEV 688
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 689 AEQYSEKLAYMPNTFF 704
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 841 VVYCNFNQLYKIDPATLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQS 897
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG-----SVH- 471
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G SV+
Sbjct: 898 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGEALRGSVYL 956
Query: 472 --------------AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSL 517
A V S LT +G LIAK+ EY +A++L +D+ L +R +
Sbjct: 957 FANDPFLPLPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKV 1016
Query: 518 RDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVP 553
SP+ + + + + LE Y MW R+ G+ P
Sbjct: 1017 WKQRISSPLFNTKQYTMELERLYLQMWERFSGGNKP 1052
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y+ A PH +A NL K++ ++ +A ECY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 298 NLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + ++AI P + +AY NL ++ GS++ A +
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEEC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 250
Query: 126 CLKIDPD 132
L + P+
Sbjct: 251 ALSLSPN 257
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYKRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A E A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|3914191|sp|P56558.1|OGT1_RAT RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|1931579|gb|AAC53121.1| O-GlcNAc transferase, p110 subunit [Rattus norvegicus]
Length = 1036
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 322 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 381
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 382 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 441
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 442 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHHSM 501
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 502 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 561
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 562 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 618
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 619 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 678
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 679 AEQYSEKLAYMPHTFF 694
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+ A IL VPNS L + P + ++ + +GL
Sbjct: 832 IVYCNFNQLYKIDPSTLQMGANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 888
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 889 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 947
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 948 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1007
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1008 RLYLQMWEHYAAGNKP 1023
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 254 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 313
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 314 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 373
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 374 YKEAIRISPTFADAYSN 390
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 186 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 245
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 246 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 305
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 306 YNTALRLCPTHADSLNN 322
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 124 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 240
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 241 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 273
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 288 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 347
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 348 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 407
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 408 YTRAIQINPAFADAHSN 424
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 60 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 119
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 120 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 179
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 180 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 223
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 220 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 279
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 280 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 339
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 340 YRKALEVFPEFAAAHSN 356
>gi|157106778|ref|XP_001649477.1| o-linked n-acetylglucosamine transferase, ogt [Aedes aegypti]
gi|108868774|gb|EAT32999.1| AAEL014746-PA [Aedes aegypti]
Length = 793
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 171/377 (45%), Gaps = 50/377 (13%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A Y A P A A +NL + + + L++A+ Y+ A+ I+
Sbjct: 92 NLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQ 151
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 152 PTFADAYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPDAIQS 211
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNYINEG 150
Y LK+ PD +A +NRL +++
Sbjct: 212 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYEARMKKLVAIVADQLEKNRLPSVH----P 267
Query: 151 HDDKLFEAHRDWGKRFMRLYSQYT----------SWDNTKDPERPLVIGYVSPDYFTHSV 200
H L+ D+ K ++ + ++D + L IGYVS D+ H
Sbjct: 268 HHSMLYPLSHDFRKAIAARHANLCLEKIHILHKPPYKFSRDMSQRLRIGYVSSDFGNHPT 327
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAM 259
S+ +++ HD +V Y A+ D T FR K+ ++ + ++ I K A
Sbjct: 328 SHLMQSIPGMHDRSRVEVFCY-ALSPDDGTT--FRSKISREAEHFIELSQIPCNGKAADR 384
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE 319
+ D I ILV + G+T + + A +PAP+QV W+GYP T+G +DY ITD++ P E
Sbjct: 385 IHADGIHILVNMNGYTKGARNEIFALRPAPIQVMWLGYPGTSGASFMDYIITDTVTSPME 444
Query: 320 TKQKHVEELIRLPECFL 336
++ E+L +P +
Sbjct: 445 LADQYSEKLAYMPHTYF 461
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
L + + + +FN L KI P L W IL VPNS L + P ++ + +Q
Sbjct: 586 GLPDDAVVYCNFNQLYKIDPHTLASWVNILKHVPNSVLWLLRFPAVGET---NIQAAAQQ 642
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
LGL R+ + + +H++ L D+ LDT G TT+ + L+ G P VT+
Sbjct: 643 LGLSPGRI-IFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPAETL 701
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A V S L +G LIA++ EY +A++L +D L +R + +SP+ D +
Sbjct: 702 ASRVAASQLATLGCPELIARSRQEYQDIAIKLGTDKEYLKAIRAKVWLARCESPLFDCKQ 761
Query: 532 FALGLESTYRNMWHRYCKGDVP 553
+A G+E+ + MW R+ +G+ P
Sbjct: 762 YAQGMEALFYKMWERFARGEKP 783
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ + +A +CY AL +
Sbjct: 24 NLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVQEAEDCYNTALRLC 83
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + SLNNL + QG ++ A + KA+ P +A A++NL + + G ++ A+
Sbjct: 84 PNHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLH 143
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 144 YKEAIRIQPTFADAYSN 160
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E + A Y A P+ A++ NNL I +++ +++A Y AL +
Sbjct: 58 NLANALKEKGQVQEAEDCYNTALRLCPNHADSLNNLANIKREQGYIEEATRLYLKALEVF 117
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK++ A ++AI PT+A+AY+N+G ++ ++ A+
Sbjct: 118 PEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQC 177
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + ++I+P +A N LA + + G+ +++R
Sbjct: 178 YTRAIQINPAFADAHSN--LASIHKDSGNIPDAIQSYR 213
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 50 KAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109
KAV Y AL++ P + NL VY QG +D A + +AI P + +AY NL
Sbjct: 3 KAVAAYLRALNLSPYNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANA 62
Query: 110 YRDAGSISLAIDAYEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
++ G + A D Y L++ P DS N N YI E
Sbjct: 63 LKEKGQVQEAEDCYNTALRLCPNHADSLNNLANIKREQGYIEEA 106
>gi|46909607|ref|NP_631883.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Mus musculus]
gi|146325019|sp|Q8CGY8.2|OGT1_MOUSE RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|34785719|gb|AAH57319.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Mus musculus]
gi|148682191|gb|EDL14138.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Mus
musculus]
Length = 1046
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 452 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHHSM 511
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 512 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 571
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 572 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 628
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 629 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 688
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 689 AEQYSEKLAYMPHTFF 704
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 842 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 898
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 899 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 957
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 958 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1017
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1018 RLYLQMWEHYAAGNKP 1033
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|351710822|gb|EHB13741.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Heterocephalus glaber]
Length = 1270
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 283 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 342
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 343 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 402
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 403 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 462
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 463 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 522
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 523 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 579
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 580 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 639
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 640 AEQYSEKLAYMPHTFF 655
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Query: 352 ALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQ 411
L + I + +FN L KI P LQ+WA IL VPNS L + P + ++ +
Sbjct: 1060 GLPDDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QN 1116
Query: 412 LGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 471
+GL R+ P + +H++ L D+ LDT G TT + L+ G P VTM G
Sbjct: 1117 MGLPQNRIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETL 1175
Query: 472 AHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQN 531
A V S LT +G LIAKN EY +A++L +D+ L +R + SP+ + +
Sbjct: 1176 ASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQ 1235
Query: 532 FALGLESTYRNMWHRYCKGDVP 553
+ + LE Y MW Y G+ P
Sbjct: 1236 YTMELERLYLQMWEHYAAGNKP 1257
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 215 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 274
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 275 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 334
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 335 YKEAIRISPTFADAYSN 351
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A++ NNL I +++ N+++AV Y+ AL + P F+ + +NL V QG
Sbjct: 267 YNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 326
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
K+ A ++AI +PT+A+AY+N+G ++ + A+ Y + ++I+P +A N
Sbjct: 327 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 385
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 181 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 240
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 241 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 300
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 301 YRKALEVFPEFAAAHSN 317
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 24 AFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83
A +P+ +A NLG + K+ D+AV Y ALS+ PN + NL VY QG +D
Sbjct: 168 AVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLID 227
Query: 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
A + +AI P + +AY NL ++ GS++ A D Y L++ P ++ N
Sbjct: 228 LAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNN 283
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 793 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQY---AQNMGLPQN 849
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 850 RIIFSP-VAPKEEHVRRGQLADVCLDTLLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 908
Query: 478 S 478
S
Sbjct: 909 S 909
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 31/177 (17%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA + +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 60 RLDRSAHFSTLAIKQNPLLAEAYSFGENVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 119
Query: 73 GVVYTVQGKMDAAAEMI-----------------------------EKAIAANPTYAEAY 103
G M+ A + KA+ +P + +AY
Sbjct: 120 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAVTLDPNFLDAY 179
Query: 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
NLG + ++A A+ AY + L + P+ N LA Y +G D + +R
Sbjct: 180 INLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 234
>gi|354502726|ref|XP_003513433.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit
[Cricetulus griseus]
Length = 1046
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PKFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 452 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHHSM 511
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 512 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 571
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 572 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 628
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 629 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 688
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 689 AEQYSEKLAYMPHTFF 704
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 842 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 898
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 899 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 957
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 958 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1017
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1018 RLYLQMWEHYAAGNKP 1033
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPKFADAYSN 400
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +P +A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPKFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|229577290|ref|NP_001153341.1| O-glycosyltransferase [Nasonia vitripennis]
Length = 1061
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 169/377 (44%), Gaps = 50/377 (13%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A Y A P A A +NL + + + L++A+ Y+ A+ I+
Sbjct: 346 NLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ 405
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 406 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQS 465
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNYINEG 150
Y LK+ PD +A +NRL +++
Sbjct: 466 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYEARMKKLVSIVAEQLDKNRLPSVH----P 521
Query: 151 HDDKLFEAHRDWGKRFMRLYSQY----------TSWDNTKDPERPLVIGYVSPDYFTHSV 200
H L+ D+ K ++ + ++ L IGYVS D+ H
Sbjct: 522 HHSMLYPLSHDFRKAIAARHANLCIEKIHVLHKQPFKYPREAGMRLKIGYVSSDFGNHPT 581
Query: 201 SYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAM 259
S+ +++ HD N ++ Y A+ D T FR K+ ++ + D+ + K A
Sbjct: 582 SHLMQSIPGLHDRNNVEIFCY-ALSSDDGTT--FRGKIARESEHFVDLSQVPCNGKAADR 638
Query: 260 VREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPE 319
+ D I ILV + G+T + + A +PAP+QV W+GYP T+G +DY ITD + P E
Sbjct: 639 INSDGIHILVNMNGYTKGARNEIFALRPAPIQVMWLGYPGTSGASFMDYLITDEVTSPLE 698
Query: 320 TKQKHVEELIRLPECFL 336
++ E+L +P +
Sbjct: 699 LASQYSEKLAYMPHTYF 715
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
+ + +FN L KI P L +WA IL VPNS L + P + +T +QLGL
Sbjct: 852 VVYCNFNQLYKIDPLTLHMWAYILKNVPNSVLWLLRFPAVGE---QNLQTTAQQLGLAPG 908
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ L + +H++ L D+ LDT G TT+ + L+ G P VT+ G A V
Sbjct: 909 RI-LFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA 967
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S L +G L+A+ EY ++A++L +D L +R + + S SP+ + + +A G+E
Sbjct: 968 SQLNTLGCPELVARTRQEYQEIAVRLGTDREFLKAIRAKVWEARSNSPLFNCKMYAAGME 1027
Query: 538 STYRNMWHRYCKGDVP 553
Y+ MW RY +G+ P
Sbjct: 1028 MLYKKMWERYARGEKP 1043
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K LD+A CY A+ +P+F
Sbjct: 148 VAAGDM---EQAVQAYVTALQYNPDLYCVRSDLGNLLKALARLDEAKACYLKAIETRPDF 204
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+A +P + +AY NLG + ++A A+ AY +
Sbjct: 205 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLR 264
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ NA + LA Y +G D + +R
Sbjct: 265 ALNLSPN--NAVVHGNLACVYYEQGLIDLAIDTYR 297
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A P+ +A NL K++ + +A ECY AL +
Sbjct: 278 NLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLC 337
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G ++ A+
Sbjct: 338 PTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMH 397
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 398 YKEAIRIQPTFADAYSN 414
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 210 NLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLS 269
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ G + A +
Sbjct: 270 PNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEEC 329
Query: 123 YEQCLKIDP---DSRNAGQNRLLAMNYINEG 150
Y L++ P DS N N YI E
Sbjct: 330 YNTALRLCPTHADSLNNLANIKREQGYIEEA 360
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 244 NLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 303
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PNF + NL +G++ A E A+ PT+A++ NNL + R+ G I A
Sbjct: 304 PNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRL 363
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 364 YLKALEVFPEFAAAHSN 380
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E + A Y A P A++ NNL I +++ +++A Y AL +
Sbjct: 312 NLANALKEKGQVVEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVF 371
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK++ A ++AI PT+A+AY+N+G ++ + A+
Sbjct: 372 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQC 431
Query: 123 YEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
Y + ++I+P +A N LA + + G+ + +++R
Sbjct: 432 YTRAIQINPAFADAHSN--LASIHKDSGNIPEAIQSYR 467
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ + + + LA NP AEA +NLG +YK+R L +A+E Y+ A+ +KP+F NL
Sbjct: 84 RLEKSAHYSTLAIKQNPLLAEAYSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINL 143
Query: 73 GVVYTVQGKMDAA----------------------------AEMIE------KAIAANPT 98
G M+ A A + E KAI P
Sbjct: 144 AAALVAAGDMEQAVQAYVTALQYNPDLYCVRSDLGNLLKALARLDEAKACYLKAIETRPD 203
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 204 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDA---------YINLGN 247
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 30 HCAE----ACNNLGV------IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79
HC + NN GV I+ L+K+ +A+ P +++ +NLG VY +
Sbjct: 57 HCMQLWRQETNNTGVLLLLSSIHFQCRRLEKSAHYSTLAIKQNPLLAEAYSNLGNVYKER 116
Query: 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
G++ A E A+ P + + Y NL AG + A+ AY L+ +PD
Sbjct: 117 GQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYVTALQYNPD 169
>gi|409993375|ref|ZP_11276518.1| hypothetical protein APPUASWS_19737 [Arthrospira platensis str.
Paraca]
gi|291568213|dbj|BAI90485.1| TPR domain protein [Arthrospira platensis NIES-39]
gi|409935756|gb|EKN77277.1| hypothetical protein APPUASWS_19737 [Arthrospira platensis str.
Paraca]
Length = 1104
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 147/608 (24%), Positives = 253/608 (41%), Gaps = 91/608 (14%)
Query: 8 YGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQ 67
+ +M + AI Y+ P+ +A NL + L +A+ YQ L +KP +++
Sbjct: 515 FTKMRRHQDAINHYQKVIELKPNFPDAYANLANMQATIGQLPEAIANYQKTLQLKPEWAE 574
Query: 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYN----------NLG---------- 107
L + + +A A + EKA+ P +AEAY NLG
Sbjct: 575 VYCRLAHIQKQKEPKEAVANL-EKALELKPDFAEAYQQLCDLLSHSTNLGKARKVADRYW 633
Query: 108 --------VL--------YRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY----- 146
VL Y +G+ A+ E+ +KI +S + + Y
Sbjct: 634 ENCGKTLPVLCAIAYIFSYTQSGACEQALAKLEELIKICNNSIETLTQIEIRLIYEIILF 693
Query: 147 -INEGHDDKLFEAHRDWGKRFMRLYSQY-------TSWDNTKDPERPLVIGYVSPDYFTH 198
+ D+ AH F RL QY T +P PL IG++S + H
Sbjct: 694 TVPHLRDNLEGNAH------FYRLICQYYYQEPIATPPSIYAEPRSPLKIGFLSKHFRRH 747
Query: 199 SVSYFIEAPLVYHDYQNYKVVVY-SAVVKADAKTIRFREKVMKKGGIWRDIYG---IDEK 254
SV + E + + +Y S ++ D T R+ + V K W Y +
Sbjct: 748 SVGWCAEGVIKEMSAITPHINLYISGILHPDEVTARYEQTVAK--CYWPKSYPNGFASPE 805
Query: 255 KVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314
+++ +R D+ID+LV+L T + ++ PAPV VTW+G+ + L Y I D
Sbjct: 806 ELSQQIRSDRIDVLVDLDSVTIPVNVQVLHKSPAPVCVTWLGF-DAPYLTRNHYLICDQH 864
Query: 315 ADPPETKQKHVEELIRLPECFLCYTPSPEAGPV----------CPTPALTNGFITFGSFN 364
+ PP ++ ++E L+RLP+ + P PV P A+ + G
Sbjct: 865 SHPPGIEKHYLERLVRLPDTAVAIAGLP-TRPVDRNMVRQQLNIPPNAVAYLCVAPGRKT 923
Query: 365 NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424
N I +V IL +VPNS L+ K + +R + +++G++ R+ L L
Sbjct: 924 NGEMIKAQV-----NILRSVPNSVLIRKGQG-DAQLLREMYNQACQEVGVDLNRLIFLGL 977
Query: 425 ILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG 484
+H Y + D+ LD++PY G T E+L+ +P VT +G + +G + L V
Sbjct: 978 TQTEEEHRAIYKVADVMLDSYPYNGGTHNLEALWSELPVVTRSGRQYLSRMGYAFLKAVN 1037
Query: 485 LKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSK-------SPVCDGQNFALGLE 537
L +A + +EY QL ++ + A LR + +++ +P+ + + A +
Sbjct: 1038 LDIGVAWSWEEYTQLGIEFGHN----APLRQQISSHLARVKQPDTLAPLWNPKQLAAQMY 1093
Query: 538 STYRNMWH 545
T+ + H
Sbjct: 1094 RTFEQLRH 1101
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Query: 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNL--GVIYKDRDNLDKAVECYQMAL 59
+NLG Y ++ + AI +++A P EA N G I R ++A+ YQ A+
Sbjct: 405 WNLGRVYQQLGNTEAAINSWKIALELKPDLVEAEFNFEFGNILARRGEYEQAIASYQRAI 464
Query: 60 SIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA 119
S KPN+++ N+G + Q +++ A E ++KAI+ NP E Y + ++ A
Sbjct: 465 SRKPNWAEPYANIGCLRVQQDRLEEALEQLQKAISLNPKMPEMYLHTARIFTKMRRHQDA 524
Query: 120 IDAYEQCLKIDPDSRNAGQNRLLAMNYINE-----GHDDKLFEAHRDWGKRFMRL 169
I+ Y++ +++ P+ +A N I + + K + +W + + RL
Sbjct: 525 INHYQKVIELKPNFPDAYANLANMQATIGQLPEAIANYQKTLQLKPEWAEVYCRL 579
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y + + + AI Y+ + P A NLG +Y+ N + A+ +++AL +K
Sbjct: 372 NLATMYLQNGQVNEAIAAYQKSIEIKPDLAAVHWNLGRVYQQLGNTEAAINSWKIALELK 431
Query: 63 PNFSQSLNN--LGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120
P+ ++ N G + +G+ + A ++AI+ P +AE Y N+G L + A+
Sbjct: 432 PDLVEAEFNFEFGNILARRGEYEQAIASYQRAISRKPNWAEPYANIGCLRVQQDRLEEAL 491
Query: 121 DAYEQCLKIDP 131
+ ++ + ++P
Sbjct: 492 EQLQKAISLNP 502
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
LG A K AI Y A NP+ AE NL +Y +++A+ YQ ++ IKP
Sbjct: 339 LGNALHFQGKISSAIRAYNQALEINPNFAEVHANLATMYLQNGQVNEAIAAYQKSIEIKP 398
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN--LGVLYRDAGSISLAID 121
+ + NLG VY G +AA + A+ P EA N G + G AI
Sbjct: 399 DLAAVHWNLGRVYQQLGNTEAAINSWKIALELKPDLVEAEFNFEFGNILARRGEYEQAIA 458
Query: 122 AYEQCLKIDPD 132
+Y++ + P+
Sbjct: 459 SYQRAISRKPN 469
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 3 NLGVAYGEMLK-------FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECY 55
+L AYG + D+AI Y P+ + A +NL IY ++ ++A+ CY
Sbjct: 72 DLATAYGRVGNALQRCNFLDLAIWAYTQGLEIEPNYSIAYSNLAGIYYQQERWNEAINCY 131
Query: 56 QMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115
Q L I PN + LG G + A ++AI P E Y LG
Sbjct: 132 QKCLEIAPNLAIVHWMLGNALIKSGDISGAITCYQRAINLQPNRPEFYLKLGEALAKNRQ 191
Query: 116 ISLAIDAYEQCLKIDPDSRN 135
I+ AI Y+ LK+D ++ +
Sbjct: 192 INEAIANYQTALKLDANNSD 211
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%)
Query: 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100
+Y + L++ V Q L + PNF LG QGK+ +A +A+ NP +A
Sbjct: 308 LYLSQGKLEETVATCQEILKLDPNFLLVYVVLGNALHFQGKISSAIRAYNQALEINPNFA 367
Query: 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
E + NL +Y G ++ AI AY++ ++I PD
Sbjct: 368 EVHANLATMYLQNGQVNEAIAAYQKSIEIKPD 399
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63
L AY + D AI E A P A A +G + + LD A+ Y L I+P
Sbjct: 46 LAEAYIYNQEIDPAISALEKALELQPDLATAYGRVGNALQRCNFLDLAIWAYTQGLEIEP 105
Query: 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAY 123
N+S + +NL +Y Q + + A +K + P A + LG +G IS AI Y
Sbjct: 106 NYSIAYSNLAGIYYQQERWNEAINCYQKCLEIAPNLAIVHWMLGNALIKSGDISGAITCY 165
Query: 124 EQCLKIDPD 132
++ + + P+
Sbjct: 166 QRAINLQPN 174
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG 73
+ +I Y A + + AE L Y +D A+ + AL ++P+ + + +G
Sbjct: 22 YPASIDAYMKALELDLNNAEVYILLAEAYIYNQEIDPAISALEKALELQPDLATAYGRVG 81
Query: 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132
+D A + + P Y+ AY+NL +Y + AI+ Y++CL+I P+
Sbjct: 82 NALQRCNFLDLAIWAYTQGLEIEPNYSIAYSNLAGIYYQQERWNEAINCYQKCLEIAPN 140
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCL 127
SL +Y QGK++ ++ + +P + Y LG G IS AI AY Q L
Sbjct: 301 SLQKQAELYLSQGKLEETVATCQEILKLDPNFLLVYVVLGNALHFQGKISSAIRAYNQAL 360
Query: 128 KIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
+I+P+ N LA Y+ G ++ A++
Sbjct: 361 EINPNFAEVHAN--LATMYLQNGQVNEAIAAYQ 391
>gi|432118087|gb|ELK37988.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Myotis davidii]
Length = 1046
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRL------LAM 144
Y LK+ PD +A +NRL +M
Sbjct: 452 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 511
Query: 145 NY-INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
Y ++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 512 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 571
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 572 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 628
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 629 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 688
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 689 AEQYSEKLAYMPHTFF 704
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 842 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 898
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 899 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 957
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAKN EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 958 SQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1017
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1018 RLYLQMWEHYAAGNKP 1033
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|344282022|ref|XP_003412774.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Loxodonta africana]
Length = 1046
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRL------LAM 144
Y LK+ PD +A +NRL +M
Sbjct: 452 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 511
Query: 145 NY-INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
Y ++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 512 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 571
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 572 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 628
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 629 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 688
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 689 AEQYSEKLAYMPHTFF 704
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 842 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 898
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 899 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 957
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAKN EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 958 SQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1017
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1018 RLYLQMWEHYAAGNKP 1033
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 21 YELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80
Y A P A++ NNL I +++ N+++AV Y+ AL + P F+ + +NL V QG
Sbjct: 316 YNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
Query: 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139
K+ A ++AI +PT+A+AY+N+G ++ + A+ Y + ++I+P +A N
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 434
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
>gi|198434517|ref|XP_002131769.1| PREDICTED: similar to O-linked N-acetylglucosamine transferase
[Ciona intestinalis]
Length = 1042
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 169/380 (44%), Gaps = 53/380 (13%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + AI Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 338 NLANIKREQGLIEEAIALYSKALEVFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRIS 397
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+GSI AI +
Sbjct: 398 PTFADAYSNMGNTLKEMQDVQGAIQCYTRAIQINPAFADAHSNLASVHKDSGSIPAAIQS 457
Query: 123 YEQCLKIDPD--------------------------------SRNAGQNRLLAMNYINEG 150
Y LK+ PD S +NRL +++
Sbjct: 458 YRTALKLKPDFPDAYCNLAHCLQIICDWSDYDERMKKLVSIVSDQLSKNRLPSVH----P 513
Query: 151 HDDKLFEAHRDWGKRFMRLYS----------QYTSWDNTKD---PERPLVIGYVSPDYFT 197
H L+ D+ K + ++D+ + L IGYVS D+
Sbjct: 514 HHSMLYPLTHDFRKAIAARHGALCLDKINILHKPAYDHPRSLAPTNGKLRIGYVSSDFGN 573
Query: 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKV 256
H S+ +++ HD KV V+ + D T FR+KV + + D+ I K
Sbjct: 574 HPTSHLMQSIPGVHDLS--KVEVFCYALSPDDNT-NFRKKVSNEVANFVDLSQIQCNGKA 630
Query: 257 AAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLAD 316
A + +D I IL+ + G+T + + + +PAP+Q W+GYP T+G +DY I+D++
Sbjct: 631 ADRIHQDGIHILLNMNGYTKGARNELFSLRPAPIQAMWLGYPGTSGATFMDYIISDAVTS 690
Query: 317 PPETKQKHVEELIRLPECFL 336
P E + ++ E+L +P F
Sbjct: 691 PLELRDQYSEKLAYMPNTFF 710
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
Query: 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQL 412
L N I F +FN L KI P L +W IL VPNS L + P ++ +F +
Sbjct: 840 LPNNAIVFCNFNQLYKIDPSTLIMWCNILKRVPNSVLWLLRFPAVGEANVKKF--ARQTC 897
Query: 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHA 472
G+ + R+ P + +H++ L DI LDT G TT + L+ G P VT+ A
Sbjct: 898 GINANRIIFSP-VAPKEEHVRRGQLADICLDTPLCNGHTTAMDVLWAGCPMVTLPKETLA 956
Query: 473 HNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNF 532
V S L +G LIA+N +Y +A++L +D+ L ++R + S SP+ + + +
Sbjct: 957 SRVASSQLACLGCPELIAENSQQYEDIAVRLGTDMDYLKSVRAKVWHRRSTSPLFNVKRY 1016
Query: 533 ALGLESTYRNMWHRYCKGDVPS 554
LE MW +Y G+ P+
Sbjct: 1017 VSDLEKLLFKMWRKYENGEDPN 1038
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y+ A PH +A NL K++ + A ECY AL +
Sbjct: 270 NLACVYYEQGLVDLAIDTYKRAIELQPHFPDAYCNLANALKEKGKVGDAEECYNKALRLC 329
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 330 PTHADSLNNLANIKREQGLIEEAIALYSKALEVFPEFAAAHSNLASVLQQQGKLQEALLH 389
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 390 YKEAIRISPTFADAYSN 406
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A + +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 236 NLGNVLKEARIFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQGLVDLAIDTYKRAIELQ 295
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +GK+ A E KA+ PT+A++ NNL + R+ G I AI
Sbjct: 296 PHFPDAYCNLANALKEKGKVGDAEECYNKALRLCPTHADSLNNLANIKREQGLIEEAIAL 355
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 356 YSKALEVFPEFAAAHSN 372
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E K A Y A P A++ NNL I +++ +++A+ Y AL +
Sbjct: 304 NLANALKEKGKVGDAEECYNKALRLCPTHADSLNNLANIKREQGLIEEAIALYSKALEVF 363
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + AI
Sbjct: 364 PEFAAAHSNLASVLQQQGKLQEALLHYKEAIRISPTFADAYSNMGNTLKEMQDVQGAIQC 423
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 424 YTRAIQINPAFADAHSN 440
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y AL++
Sbjct: 202 NLGCVFNSQGEIWLAIHHFEKAVKLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLS 261
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + ++AI P + +AY NL ++ G + A +
Sbjct: 262 PNHAVVHGNLACVYYEQGLVDLAIDTYKRAIELQPHFPDAYCNLANALKEKGKVGDAEEC 321
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P ++ N
Sbjct: 322 YNKALRLCPTHADSLNN 338
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F + A NP AEA +NLG +YK+R L +A++ Y+ A+ +KP+F NL
Sbjct: 76 RLDKSAYFSKHAIKTNPMLAEAYSNLGNVYKERGQLQEALDHYRHAVRLKPDFIDGYINL 135
Query: 73 GVVYTVQGKMDAAAEMIEKAIAANP----------------------------------T 98
G ++ A A+ NP
Sbjct: 136 AAALVTAGDLEGAVHAYFSALQINPELYCVRSDLGNLLKALGRLEEAKACYLKAIETQTN 195
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ +K+DP+ +A YIN G+
Sbjct: 196 FAVAWSNLGCVFNSQGEIWLAIHHFEKAVKLDPNFLDA---------YINLGN 239
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A + A+ Y A NP ++LG + K L++A CY A+ +
Sbjct: 134 NLAAALVTAGDLEGAVHAYFSALQINPELYCVRSDLGNLLKALGRLEEAKACYLKAIETQ 193
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
NF+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ A
Sbjct: 194 TNFAVAWSNLGCVFNSQGEIWLAIHHFEKAVKLDPNFLDAYINLGNVLKEARIFDRAVAA 253
Query: 123 YEQCLKIDPD 132
Y + L + P+
Sbjct: 254 YLRALNLSPN 263
>gi|148682190|gb|EDL14137.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_a [Mus
musculus]
Length = 1036
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 322 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 381
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 382 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 441
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 442 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHHSM 501
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 502 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 561
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 562 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 618
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 619 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 678
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 679 AEQYSEKLAYMPHTFF 694
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 832 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 888
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 889 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 947
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 948 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1007
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1008 RLYLQMWEHYAAGNKP 1023
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 254 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 313
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 314 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 373
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 374 YKEAIRISPTFADAYSN 390
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 186 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 245
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 246 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 305
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 306 YNTALRLCPTHADSLNN 322
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 124 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 240
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 241 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 273
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 288 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 347
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 348 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 407
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 408 YTRAIQINPAFADAHSN 424
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 60 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 119
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 120 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 179
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 180 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 223
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 220 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 279
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 280 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 339
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 340 YRKALEVFPEFAAAHSN 356
>gi|440901878|gb|ELR52744.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit, partial [Bos grunniens mutus]
Length = 1037
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 323 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 382
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 383 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 442
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 443 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSM 502
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 503 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 562
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 563 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 619
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 620 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 679
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 680 AEQYSEKLAYMPHTFF 695
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 833 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 889
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 890 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 948
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAKN EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 949 SQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1008
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1009 RLYLQMWEHYAAGNKP 1024
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 255 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 314
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 315 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 374
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 375 YKEAIRISPTFADAYSN 391
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 187 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 246
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 247 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 306
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 307 YNTALRLCPTHADSLNN 323
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 125 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 181
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 182 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 241
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 242 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 274
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 289 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 348
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 349 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 408
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 409 YTRAIQINPAFADAHSN 425
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 61 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 120
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 121 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 180
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 181 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 224
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 221 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 280
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 281 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 340
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 341 YRKALEVFPEFAAAHSN 357
>gi|139948535|ref|NP_058803.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Rattus norvegicus]
gi|149042180|gb|EDL95887.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Rattus
norvegicus]
gi|149042181|gb|EDL95888.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Rattus
norvegicus]
Length = 1036
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 322 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 381
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 382 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 441
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 442 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHHSM 501
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 502 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 561
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 562 HLMQSIPGMHNPDKFEVFCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 618
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 619 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 678
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 679 AEQYSEKLAYMPHTFF 694
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 832 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 888
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 889 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 947
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + + LE
Sbjct: 948 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELE 1007
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1008 RLYLQMWEHYAAGNKP 1023
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 254 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 313
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 314 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 373
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 374 YKEAIRISPTFADAYSN 390
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 186 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 245
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 246 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 305
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 306 YNTALRLCPTHADSLNN 322
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 124 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 240
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 241 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 273
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 288 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 347
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 348 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 407
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 408 YTRAIQINPAFADAHSN 424
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 60 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 119
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 120 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 179
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 180 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 223
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 220 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 279
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 280 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 339
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 340 YRKALEVFPEFAAAHSN 356
>gi|456738066|gb|EMF62743.1| TPR domain protein, putative component of TonB system
[Stenotrophomonas maltophilia EPM1]
Length = 570
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 212/525 (40%), Gaps = 44/525 (8%)
Query: 53 ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112
+ + AL ++PN ++L LG V + G AA+++ +A A P + LG D
Sbjct: 42 QAARRALQLRPNHPEALARLGRVAWMAGAHGDAAKLLGQASALAPQHPGIALWLGHALED 101
Query: 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWG--------K 164
A A AY + + P RL + + D A +
Sbjct: 102 ADDAEGASAAYRRAHGLMPAEPYIAAQRLAWQRRLCDWQDLDTLAAQVRAAVASSQGVVE 161
Query: 165 RFMRLYSQYTSWDN---------------------TKDPERPLVIGYVSPDYFTHSVSYF 203
F L ++ + T P PL +G++S + H
Sbjct: 162 PFAFLSEDASAAEQLACAHTRALAVAASVRPLPPATVRPHGPLRVGFLSNGFGAHPTGLL 221
Query: 204 IEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVRED 263
A + A+ + D IR R ++ D+ G+ AA +R
Sbjct: 222 TVALFEQLRRDPALQLHLFALNRDDGSRIRQR---LQAAAQLHDVAGLRHTDTAARIRAQ 278
Query: 264 KIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQK 323
ID+L +L G ++A +PAP+Q+ W+ YP T+G P +D + D+ A PP +
Sbjct: 279 GIDLLFDLRGWGGGGTPEVLAMRPAPLQLNWLAYPGTSGAPWMDAVVGDAFALPPALEPC 338
Query: 324 HVEELIRLPECFLCYTPSPEAGPVCPTP-----ALTNGFITFGSFNNLAKITPKVLQVWA 378
+ E ++RLP F PS + P P L + F FNN K+ P+ +
Sbjct: 339 YSERVLRLPRAF---QPSDNTRVLEPAPTRADCGLPAQGVVFCCFNNSYKLNPRSMGRAF 395
Query: 379 RILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLM 438
+L AVP S L + P D+ R + + GL+ R+ + L + ++ Y L
Sbjct: 396 AVLQAVPGSVLWLLSGPGQADA---RLRTAAQAAGLDPARLVFM-AKLPHPQYLARYPLA 451
Query: 439 DISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQ 498
D+ LDT PY TT ++L+ G P +T G A V SL +G+ + ++ ++
Sbjct: 452 DLFLDTHPYNAHTTASDALWAGCPVLTYPGDTFAARVAGSLNHHLGMARMNVADDAAFIT 511
Query: 499 LALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543
A L +D ALA LR L +S + D FA L + + +
Sbjct: 512 TASALGNDPAALAALRAELAQARERSGLFDMDGFAHDLSTLVQQL 556
>gi|27499606|gb|AAO17363.1| O-linked GlcNAc transferase [Mus musculus]
Length = 1046
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 45/376 (11%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL E + A+ Y A P A A +NL + + + L +A+ Y+ A+ I
Sbjct: 332 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 391
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +N+G + A + +AI NP +A+A++NL +++D+G+I AI +
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS 451
Query: 123 YEQCLKIDPDSRNA--------------------------------GQNRLLAMNY---- 146
Y LK+ PD +A +NRL +++
Sbjct: 452 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHHSM 511
Query: 147 ---INEGHDDKLFEAHRDWGKRFMRLYSQ--YTSWDNTKDPERPLVIGYVSPDYFTHSVS 201
++ G + E H + + + + Y + K + L +GYVS D+ H S
Sbjct: 512 LYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTS 571
Query: 202 YFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID-EKKVAAMV 260
+ +++ H+ ++V Y+ + D T FR KVM + + D+ I K A +
Sbjct: 572 HLMQSIPGMHNPDKFEVXCYA--LSPDDGT-NFRVKVMAEANHFIDLSQIPCNGKAADRI 628
Query: 261 REDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET 320
+D I ILV + G+T + + A +PAP+Q W+GYP T+G +DY ITD P E
Sbjct: 629 HQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEV 688
Query: 321 KQKHVEELIRLPECFL 336
+++ E+L +P F
Sbjct: 689 AEQYSEKLAYMPHTFF 704
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 358 ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL 417
I + +FN L KI P LQ+WA IL VPNS L + P + ++ + +GL
Sbjct: 842 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYA---QNMGLPQN 898
Query: 418 RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477
R+ P + +H++ L D+ LDT G TT + L+ G P VTM G A V
Sbjct: 899 RIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAA 957
Query: 478 SLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLE 537
S LT +G LIAK+ EY +A++L +D+ L +R + SP+ + + + LE
Sbjct: 958 SQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNXXQYTMELE 1017
Query: 538 STYRNMWHRYCKGDVP 553
Y MW Y G+ P
Sbjct: 1018 RLYLQMWEHYAAGNKP 1033
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL Y E D+AI Y A PH +A NL K++ ++ +A +CY AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P + SLNNL + QG ++ A + KA+ P +A A++NL + + G + A+
Sbjct: 324 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 383
Query: 123 YEQCLKIDPDSRNAGQN 139
Y++ ++I P +A N
Sbjct: 384 YKEAIRISPTFADAYSN 400
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG + + +AI +E A +P+ +A NLG + K+ D+AV Y ALS+
Sbjct: 196 NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 255
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
PN + NL VY QG +D A + +AI P + +AY NL ++ GS++ A D
Sbjct: 256 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 315
Query: 123 YEQCLKIDPDSRNAGQN 139
Y L++ P ++ N
Sbjct: 316 YNTALRLCPTHADSLNN 332
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65
VA G+M + A+ Y A +NP ++LG + K L++A CY A+ +PNF
Sbjct: 134 VAAGDM---EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125
+ + +NLG V+ QG++ A EKA+ +P + +AY NLG + ++A A+ AY +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 250
Query: 126 CLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160
L + P+ N LA Y +G D + +R
Sbjct: 251 ALSLSPNHAVVHGN--LACVYYEQGLIDLAIDTYR 283
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NL A E A Y A P A++ NNL I +++ N+++AV Y+ AL +
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 357
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P F+ + +NL V QGK+ A ++AI +PT+A+AY+N+G ++ + A+
Sbjct: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 417
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + ++I+P +A N
Sbjct: 418 YTRAIQINPAFADAHSN 434
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL 72
+ D + F LA NP AEA +NLG +YK+R L +A+E Y+ AL +KP+F NL
Sbjct: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
Query: 73 GVVYTVQGKMDAAAEM---------------------------IE-------KAIAANPT 98
G M+ A + +E KAI P
Sbjct: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 189
Query: 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151
+A A++NLG ++ G I LAI +E+ + +DP+ +A YIN G+
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA---------YINLGN 233
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK 62
NLG E FD A+ Y A +P+ A NL +Y ++ +D A++ Y+ A+ ++
Sbjct: 230 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 289
Query: 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA 122
P+F + NL +G + A + A+ PT+A++ NNL + R+ G+I A+
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 123 YEQCLKIDPDSRNAGQN 139
Y + L++ P+ A N
Sbjct: 350 YRKALEVFPEFAAAHSN 366
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121
+P+ + +L L ++ ++D +A AI NP AEAY+NLG +Y++ G + AI+
Sbjct: 51 EPDNTGALLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIE 110
Query: 122 AYEQCLKIDPD 132
Y L++ PD
Sbjct: 111 HYRHALRLKPD 121
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,923,614,285
Number of Sequences: 23463169
Number of extensions: 426031843
Number of successful extensions: 1162204
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13807
Number of HSP's successfully gapped in prelim test: 7464
Number of HSP's that attempted gapping in prelim test: 1028742
Number of HSP's gapped (non-prelim): 101304
length of query: 619
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 470
effective length of database: 8,863,183,186
effective search space: 4165696097420
effective search space used: 4165696097420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)