Query 007075
Match_columns 619
No_of_seqs 601 out of 4296
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 16:30:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007075.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007075hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gyw_A UDP-N-acetylglucosamine 100.0 6E-110 2E-114 949.4 64.9 546 1-556 12-718 (723)
2 3q3e_A HMW1C-like glycosyltran 100.0 9.7E-75 3.3E-79 628.7 31.7 350 181-549 271-629 (631)
3 2vsy_A XCC0866; transferase, g 100.0 3.4E-63 1.2E-67 555.1 65.8 526 2-549 27-565 (568)
4 3vtx_A MAMA; tetratricopeptide 99.9 6.5E-20 2.2E-24 172.3 24.1 162 1-164 8-169 (184)
5 2pl2_A Hypothetical conserved 99.8 7.4E-20 2.5E-24 177.8 22.3 162 1-165 8-180 (217)
6 2pl2_A Hypothetical conserved 99.8 9.5E-20 3.3E-24 177.0 19.8 158 1-161 42-210 (217)
7 4ga2_A E3 SUMO-protein ligase 99.8 4.5E-20 1.5E-24 168.6 11.3 147 3-151 2-149 (150)
8 2x6q_A Trehalose-synthase TRET 99.8 3.1E-18 1.1E-22 183.0 26.0 342 184-544 39-415 (416)
9 4i17_A Hypothetical protein; T 99.8 4.2E-18 1.4E-22 165.8 20.2 150 1-152 10-169 (228)
10 2h6f_A Protein farnesyltransfe 99.8 2.7E-18 9.3E-23 181.4 20.0 153 1-155 100-254 (382)
11 3oy2_A Glycosyltransferase B73 99.8 2.8E-18 9.5E-23 183.2 18.9 336 187-546 2-393 (413)
12 3okp_A GDP-mannose-dependent a 99.8 2.9E-18 1E-22 181.3 17.3 338 185-546 4-382 (394)
13 2h6f_A Protein farnesyltransfe 99.8 8.7E-18 3E-22 177.5 18.2 159 1-161 134-301 (382)
14 4gco_A Protein STI-1; structur 99.8 1.5E-17 5.1E-22 147.1 15.6 118 23-140 4-121 (126)
15 3as5_A MAMA; tetratricopeptide 99.8 8.7E-17 3E-21 149.3 21.4 163 1-165 11-173 (186)
16 2q7f_A YRRB protein; TPR, prot 99.7 2.4E-16 8.3E-21 153.7 23.8 161 2-164 61-221 (243)
17 3vtx_A MAMA; tetratricopeptide 99.7 9.7E-17 3.3E-21 150.5 18.5 134 1-134 42-175 (184)
18 4abn_A Tetratricopeptide repea 99.7 3.4E-17 1.2E-21 178.4 17.6 161 1-164 105-286 (474)
19 4eqf_A PEX5-related protein; a 99.7 2.3E-16 7.7E-21 164.6 23.2 160 2-163 103-308 (365)
20 2vq2_A PILW, putative fimbrial 99.7 3.3E-16 1.1E-20 150.5 22.5 163 1-165 11-176 (225)
21 3gyz_A Chaperone protein IPGC; 99.7 5.8E-18 2E-22 154.7 9.4 126 9-134 13-138 (151)
22 2jjm_A Glycosyl transferase, g 99.7 6.4E-18 2.2E-22 179.3 11.1 278 254-550 89-392 (394)
23 2gek_A Phosphatidylinositol ma 99.7 4.2E-17 1.5E-21 173.1 17.2 331 182-545 17-385 (406)
24 3uq3_A Heat shock protein STI1 99.7 2E-16 6.7E-21 155.5 20.4 164 1-166 41-237 (258)
25 4gco_A Protein STI-1; structur 99.7 8.6E-17 2.9E-21 142.2 15.9 109 2-110 17-125 (126)
26 2q7f_A YRRB protein; TPR, prot 99.7 2E-16 6.7E-21 154.3 20.0 162 1-164 26-187 (243)
27 4eqf_A PEX5-related protein; a 99.7 3.7E-16 1.3E-20 162.9 22.7 162 1-164 68-275 (365)
28 3qky_A Outer membrane assembly 99.7 1.4E-16 4.7E-21 158.7 18.3 163 1-165 18-224 (261)
29 2ho1_A Type 4 fimbrial biogene 99.7 3.3E-16 1.1E-20 154.2 20.5 160 1-162 40-201 (252)
30 1w3b_A UDP-N-acetylglucosamine 99.7 3E-16 1E-20 165.2 21.3 159 2-162 173-331 (388)
31 2iuy_A Avigt4, glycosyltransfe 99.7 4E-16 1.4E-20 162.0 21.7 288 198-546 30-338 (342)
32 2ho1_A Type 4 fimbrial biogene 99.7 9.2E-16 3.2E-20 150.9 23.2 163 1-165 74-238 (252)
33 1w3b_A UDP-N-acetylglucosamine 99.7 3.7E-16 1.3E-20 164.6 21.6 161 2-164 139-299 (388)
34 3urz_A Uncharacterized protein 99.7 1.4E-16 5E-21 153.4 16.2 158 2-162 8-183 (208)
35 3c48_A Predicted glycosyltrans 99.7 1.7E-16 5.9E-21 170.5 18.2 211 325-546 207-428 (438)
36 4gyw_A UDP-N-acetylglucosamine 99.7 8.8E-17 3E-21 182.9 16.3 133 1-133 46-178 (723)
37 4i17_A Hypothetical protein; T 99.7 2.7E-16 9.2E-21 153.0 17.3 139 1-139 45-219 (228)
38 2r5s_A Uncharacterized protein 99.7 1.4E-16 4.7E-21 149.1 14.4 160 2-164 10-172 (176)
39 4abn_A Tetratricopeptide repea 99.7 1E-16 3.5E-21 174.6 15.6 156 1-159 140-315 (474)
40 3uq3_A Heat shock protein STI1 99.7 6.1E-16 2.1E-20 151.9 19.3 161 1-164 8-201 (258)
41 2pzi_A Probable serine/threoni 99.7 8.4E-17 2.9E-21 183.2 14.6 148 1-151 436-583 (681)
42 3fro_A GLGA glycogen synthase; 99.7 2.9E-16 1E-20 168.2 17.8 205 324-545 210-432 (439)
43 3qou_A Protein YBBN; thioredox 99.7 5.2E-16 1.8E-20 157.4 18.3 161 2-164 121-283 (287)
44 2vq2_A PILW, putative fimbrial 99.7 3E-15 1E-19 143.7 22.6 160 1-162 45-208 (225)
45 1fch_A Peroxisomal targeting s 99.7 3.2E-15 1.1E-19 155.4 24.6 95 66-162 217-311 (368)
46 2vgx_A Chaperone SYCD; alterna 99.7 1.7E-16 5.8E-21 144.4 13.0 122 16-137 5-126 (148)
47 2yhc_A BAMD, UPF0169 lipoprote 99.7 1E-15 3.4E-20 149.2 19.2 162 1-162 7-210 (225)
48 3hym_B Cell division cycle pro 99.7 1.3E-15 4.4E-20 155.4 20.2 160 2-163 94-263 (330)
49 1fch_A Peroxisomal targeting s 99.7 4.2E-15 1.5E-19 154.5 24.2 162 1-164 67-279 (368)
50 3hym_B Cell division cycle pro 99.7 3.4E-15 1.2E-19 152.2 22.0 163 2-166 60-223 (330)
51 4ga2_A E3 SUMO-protein ligase 99.7 6.1E-16 2.1E-20 141.0 14.4 115 1-115 34-149 (150)
52 3u4t_A TPR repeat-containing p 99.7 1E-15 3.4E-20 152.3 17.2 160 2-165 7-171 (272)
53 2fo7_A Synthetic consensus TPR 99.7 3.3E-15 1.1E-19 130.5 18.4 133 1-133 4-136 (136)
54 3ieg_A DNAJ homolog subfamily 99.7 3.1E-15 1E-19 154.1 21.2 160 1-162 6-180 (359)
55 3ieg_A DNAJ homolog subfamily 99.7 5.2E-15 1.8E-19 152.4 22.3 162 1-164 40-216 (359)
56 2vsy_A XCC0866; transferase, g 99.6 3.4E-15 1.1E-19 166.2 20.2 153 11-165 2-157 (568)
57 2xcb_A PCRH, regulatory protei 99.6 1E-15 3.4E-20 137.8 12.8 120 19-138 5-124 (142)
58 2r60_A Glycosyl transferase, g 99.6 2.8E-15 9.6E-20 164.1 18.9 184 353-546 258-462 (499)
59 2iw1_A Lipopolysaccharide core 99.6 5.3E-16 1.8E-20 162.7 12.4 200 325-542 159-370 (374)
60 3u4t_A TPR repeat-containing p 99.6 4E-15 1.4E-19 147.9 17.5 162 1-165 40-208 (272)
61 1hh8_A P67PHOX, NCF-2, neutrop 99.6 5.8E-15 2E-19 141.5 17.8 131 1-134 9-155 (213)
62 2pzi_A Probable serine/threoni 99.6 1.3E-15 4.3E-20 173.4 15.4 150 9-161 402-559 (681)
63 3as5_A MAMA; tetratricopeptide 99.6 9E-15 3.1E-19 135.5 18.3 134 2-135 46-179 (186)
64 3mkr_A Coatomer subunit epsilo 99.6 1.6E-14 5.6E-19 146.7 21.6 147 2-155 105-253 (291)
65 3s28_A Sucrose synthase 1; gly 99.6 4.2E-15 1.5E-19 169.4 18.9 181 354-543 569-769 (816)
66 2y4t_A DNAJ homolog subfamily 99.6 1.6E-14 5.5E-19 154.6 22.2 163 1-165 29-206 (450)
67 1xnf_A Lipoprotein NLPI; TPR, 99.6 2.8E-14 9.7E-19 141.7 22.5 133 2-135 47-179 (275)
68 2y4t_A DNAJ homolog subfamily 99.6 1.6E-14 5.3E-19 154.7 21.6 162 1-164 63-239 (450)
69 3cv0_A Peroxisome targeting si 99.6 6.2E-14 2.1E-18 142.6 24.5 161 2-164 59-268 (327)
70 1p5q_A FKBP52, FK506-binding p 99.6 1.1E-15 3.7E-20 158.8 11.0 154 11-166 126-295 (336)
71 1a17_A Serine/threonine protei 99.6 2.2E-14 7.5E-19 131.1 17.9 135 32-166 13-147 (166)
72 3cv0_A Peroxisome targeting si 99.6 9.6E-14 3.3E-18 141.2 24.4 162 1-164 24-234 (327)
73 2e2e_A Formate-dependent nitri 99.6 4.2E-15 1.4E-19 138.5 12.7 129 8-136 20-151 (177)
74 1qqe_A Vesicular transport pro 99.6 6.7E-15 2.3E-19 149.5 15.0 161 2-162 41-225 (292)
75 2xpi_A Anaphase-promoting comp 99.6 3.8E-14 1.3E-18 157.7 22.4 159 2-162 377-542 (597)
76 3fp2_A TPR repeat-containing p 99.6 2.8E-14 9.7E-19 156.2 20.9 162 2-166 247-408 (537)
77 3gyz_A Chaperone protein IPGC; 99.6 1.3E-14 4.4E-19 132.4 15.1 100 1-100 39-138 (151)
78 2qzs_A Glycogen synthase; glyc 99.6 7E-15 2.4E-19 160.3 15.7 171 356-546 291-479 (485)
79 3upv_A Heat shock protein STI1 99.6 2.5E-14 8.5E-19 125.3 15.9 111 29-139 1-117 (126)
80 3sz7_A HSC70 cochaperone (SGT) 99.6 1.4E-14 4.8E-19 133.4 15.0 117 28-144 7-123 (164)
81 3qhp_A Type 1 capsular polysac 99.6 4.6E-15 1.6E-19 137.2 11.5 159 357-534 2-165 (166)
82 1xnf_A Lipoprotein NLPI; TPR, 99.6 2.8E-14 9.6E-19 141.7 17.9 153 9-164 16-172 (275)
83 1p5q_A FKBP52, FK506-binding p 99.6 2.1E-14 7.3E-19 149.0 17.7 128 1-128 150-293 (336)
84 3upv_A Heat shock protein STI1 99.6 2.7E-14 9.1E-19 125.2 15.6 112 1-112 7-124 (126)
85 3edt_B KLC 2, kinesin light ch 99.6 1.4E-14 4.7E-19 143.9 14.9 162 1-162 46-278 (283)
86 3qky_A Outer membrane assembly 99.6 2.5E-14 8.5E-19 142.2 16.4 138 1-138 55-233 (261)
87 2xpi_A Anaphase-promoting comp 99.6 1.1E-13 3.8E-18 153.9 23.1 161 3-165 344-504 (597)
88 1qqe_A Vesicular transport pro 99.6 2.1E-14 7E-19 145.9 15.1 137 1-137 80-236 (292)
89 2ond_A Cleavage stimulation fa 99.6 9.8E-14 3.3E-18 141.8 19.7 161 1-163 53-230 (308)
90 1a17_A Serine/threonine protei 99.6 1.9E-13 6.5E-18 124.8 19.6 129 1-129 16-146 (166)
91 3mkr_A Coatomer subunit epsilo 99.6 9.1E-14 3.1E-18 141.2 19.3 136 2-137 134-272 (291)
92 2bfw_A GLGA glycogen synthase; 99.6 4.7E-14 1.6E-18 134.5 15.6 156 352-522 32-197 (200)
93 2gw1_A Mitochondrial precursor 99.6 3.9E-14 1.3E-18 153.9 16.4 161 2-164 308-477 (514)
94 1ouv_A Conserved hypothetical 99.6 5.2E-13 1.8E-17 133.3 23.3 153 1-163 9-177 (273)
95 1rzu_A Glycogen synthase 1; gl 99.5 4.8E-14 1.6E-18 153.6 16.9 168 357-544 291-476 (485)
96 2vyi_A SGTA protein; chaperone 99.5 1.2E-13 4.1E-18 120.1 16.2 122 28-151 8-129 (131)
97 3sz7_A HSC70 cochaperone (SGT) 99.5 5.1E-14 1.8E-18 129.6 14.5 110 1-110 14-123 (164)
98 2lni_A Stress-induced-phosphop 99.5 5.4E-14 1.9E-18 123.2 14.0 121 28-150 12-132 (133)
99 3fp2_A TPR repeat-containing p 99.5 6.1E-14 2.1E-18 153.6 17.4 130 2-131 280-409 (537)
100 2gw1_A Mitochondrial precursor 99.5 5.8E-14 2E-18 152.6 16.7 161 2-165 241-401 (514)
101 2vgx_A Chaperone SYCD; alterna 99.5 4.5E-14 1.6E-18 128.2 12.9 104 1-104 24-127 (148)
102 2xcb_A PCRH, regulatory protei 99.5 5.3E-14 1.8E-18 126.4 13.1 110 1-110 21-130 (142)
103 2ond_A Cleavage stimulation fa 99.5 2.4E-13 8.1E-18 139.0 19.4 163 1-165 102-270 (308)
104 3nf1_A KLC 1, kinesin light ch 99.5 6.9E-14 2.3E-18 141.2 14.9 164 1-166 30-225 (311)
105 2lni_A Stress-induced-phosphop 99.5 1.6E-13 5.5E-18 120.1 15.4 115 1-115 19-133 (133)
106 4gcn_A Protein STI-1; structur 99.5 9.4E-14 3.2E-18 122.6 13.8 102 31-132 7-115 (127)
107 2f9f_A First mannosyl transfer 99.5 2.3E-14 7.9E-19 134.3 10.2 150 351-516 17-173 (177)
108 3nf1_A KLC 1, kinesin light ch 99.5 6.5E-14 2.2E-18 141.4 14.4 164 2-165 73-307 (311)
109 3urz_A Uncharacterized protein 99.5 1.5E-13 5.1E-18 132.1 15.8 118 31-150 3-136 (208)
110 2hr2_A Hypothetical protein; a 99.5 5.8E-14 2E-18 127.5 12.1 105 32-136 11-138 (159)
111 4gcn_A Protein STI-1; structur 99.5 1.3E-13 4.6E-18 121.6 14.2 104 2-106 12-122 (127)
112 1hxi_A PEX5, peroxisome target 99.5 9.3E-14 3.2E-18 121.5 13.0 101 34-134 19-119 (121)
113 2fbn_A 70 kDa peptidylprolyl i 99.5 2.6E-14 8.9E-19 136.0 9.7 143 4-148 10-168 (198)
114 2vyi_A SGTA protein; chaperone 99.5 3.1E-13 1.1E-17 117.4 15.9 116 1-116 15-130 (131)
115 1ouv_A Conserved hypothetical 99.5 1.6E-12 5.6E-17 129.7 23.2 153 1-163 41-213 (273)
116 2fbn_A 70 kDa peptidylprolyl i 99.5 1.4E-13 4.9E-18 130.8 14.6 126 2-127 42-184 (198)
117 3ulq_A Response regulator aspa 99.5 1.2E-13 4.1E-18 145.4 15.5 162 2-165 107-293 (383)
118 1hxi_A PEX5, peroxisome target 99.5 8E-14 2.7E-18 122.0 11.6 100 2-101 21-120 (121)
119 2yhc_A BAMD, UPF0169 lipoprote 99.5 2.4E-13 8.1E-18 132.3 16.2 134 1-134 44-218 (225)
120 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 1.4E-14 4.9E-19 156.9 8.0 143 11-155 247-404 (457)
121 4g1t_A Interferon-induced prot 99.5 5.2E-13 1.8E-17 144.0 20.1 160 2-161 55-238 (472)
122 2hr2_A Hypothetical protein; a 99.5 7.9E-14 2.7E-18 126.6 11.2 108 1-108 14-144 (159)
123 1na0_A Designed protein CTPR3; 99.5 7.8E-13 2.7E-17 113.8 17.1 118 28-147 4-122 (125)
124 3q49_B STIP1 homology and U bo 99.5 4.6E-13 1.6E-17 118.5 15.9 107 26-132 3-109 (137)
125 3rkv_A Putative peptidylprolyl 99.5 1.2E-13 3.9E-18 127.0 12.0 73 62-134 59-131 (162)
126 1f0k_A MURG, UDP-N-acetylgluco 99.5 3.7E-13 1.3E-17 140.7 17.2 259 254-547 86-361 (364)
127 3rjv_A Putative SEL1 repeat pr 99.5 4.8E-13 1.6E-17 129.0 16.4 156 1-164 21-196 (212)
128 1wao_1 Serine/threonine protei 99.5 1.6E-14 5.4E-19 157.3 6.5 133 2-134 10-155 (477)
129 1na0_A Designed protein CTPR3; 99.5 1.8E-12 6.1E-17 111.5 18.2 114 1-114 12-125 (125)
130 2c2l_A CHIP, carboxy terminus 99.5 1.1E-13 3.9E-18 139.7 11.9 135 1-137 7-172 (281)
131 1elw_A TPR1-domain of HOP; HOP 99.5 9.2E-13 3.1E-17 112.3 15.9 109 31-139 3-111 (118)
132 2fo7_A Synthetic consensus TPR 99.5 2.7E-12 9.1E-17 111.7 19.2 130 33-164 2-131 (136)
133 3q49_B STIP1 homology and U bo 99.5 3.5E-13 1.2E-17 119.2 13.2 114 1-114 12-130 (137)
134 2ifu_A Gamma-SNAP; membrane fu 99.5 1.9E-13 6.7E-18 139.7 12.7 160 2-162 40-221 (307)
135 1elw_A TPR1-domain of HOP; HOP 99.5 2.2E-12 7.6E-17 109.9 17.4 110 1-110 7-116 (118)
136 3edt_B KLC 2, kinesin light ch 99.5 2.8E-13 9.5E-18 134.4 12.8 157 9-167 12-200 (283)
137 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 3.8E-13 1.3E-17 145.6 14.8 127 1-127 271-413 (457)
138 3rkv_A Putative peptidylprolyl 99.5 9.1E-13 3.1E-17 120.9 15.2 115 2-116 15-148 (162)
139 2xev_A YBGF; tetratricopeptide 99.4 2.2E-12 7.7E-17 112.7 16.4 104 34-137 4-113 (129)
140 2kck_A TPR repeat; tetratricop 99.4 4.6E-13 1.6E-17 113.2 11.3 108 27-134 1-111 (112)
141 2qfc_A PLCR protein; TPR, HTH, 99.4 6.7E-12 2.3E-16 127.1 21.9 161 2-162 79-263 (293)
142 4g1t_A Interferon-induced prot 99.4 2.1E-12 7E-17 139.3 19.2 162 1-164 97-275 (472)
143 4a1s_A PINS, partner of inscut 99.4 9.9E-13 3.4E-17 138.9 16.4 165 2-166 52-253 (411)
144 2dba_A Smooth muscle cell asso 99.4 3.2E-12 1.1E-16 114.1 17.2 113 27-139 23-138 (148)
145 2if4_A ATFKBP42; FKBP-like, al 99.4 6.3E-14 2.2E-18 145.6 6.9 135 1-135 182-334 (338)
146 3ulq_A Response regulator aspa 99.4 7.3E-13 2.5E-17 139.3 14.8 152 1-152 146-319 (383)
147 2r5s_A Uncharacterized protein 99.4 4.4E-13 1.5E-17 125.0 11.4 127 1-128 43-172 (176)
148 3vue_A GBSS-I, granule-bound s 99.4 5.3E-13 1.8E-17 146.9 13.3 171 354-544 324-512 (536)
149 3q15_A PSP28, response regulat 99.4 8.2E-13 2.8E-17 138.9 14.1 162 2-165 105-290 (378)
150 2dba_A Smooth muscle cell asso 99.4 1.9E-12 6.6E-17 115.5 14.3 112 1-112 31-145 (148)
151 1ihg_A Cyclophilin 40; ppiase 99.4 1.2E-12 3.9E-17 137.7 14.4 120 2-121 227-362 (370)
152 4a1s_A PINS, partner of inscut 99.4 5.2E-13 1.8E-17 141.1 11.3 166 1-166 89-293 (411)
153 3sf4_A G-protein-signaling mod 99.4 1.7E-12 5.7E-17 136.2 14.6 165 2-166 13-217 (406)
154 2xev_A YBGF; tetratricopeptide 99.4 6.7E-12 2.3E-16 109.6 15.9 115 1-115 5-125 (129)
155 3ro2_A PINS homolog, G-protein 99.4 2E-12 6.8E-17 131.2 14.3 165 2-166 9-213 (338)
156 2xci_A KDO-transferase, 3-deox 99.4 7.3E-13 2.5E-17 139.5 11.2 246 252-522 99-361 (374)
157 3sf4_A G-protein-signaling mod 99.4 8.3E-13 2.8E-17 138.6 11.7 165 2-166 131-337 (406)
158 1zu2_A Mitochondrial import re 99.4 9.2E-13 3.1E-17 119.4 10.2 106 10-139 14-130 (158)
159 1zu2_A Mitochondrial import re 99.4 1E-12 3.4E-17 119.1 10.4 84 78-163 14-118 (158)
160 1elr_A TPR2A-domain of HOP; HO 99.4 3.1E-12 1.1E-16 111.2 12.8 108 31-139 3-117 (131)
161 3u3w_A Transcriptional activat 99.4 6.2E-12 2.1E-16 127.3 16.6 164 3-166 80-267 (293)
162 1hh8_A P67PHOX, NCF-2, neutrop 99.4 1.1E-11 3.7E-16 118.4 17.2 127 32-163 6-148 (213)
163 3k9i_A BH0479 protein; putativ 99.4 7.3E-13 2.5E-17 114.6 8.1 92 11-102 3-97 (117)
164 1elr_A TPR2A-domain of HOP; HO 99.4 1E-11 3.5E-16 107.8 15.3 113 1-114 7-126 (131)
165 3qou_A Protein YBBN; thioredox 99.4 7.4E-12 2.5E-16 126.7 16.2 137 27-165 112-248 (287)
166 3ro3_A PINS homolog, G-protein 99.4 3E-12 1E-16 115.3 11.9 131 2-132 13-161 (164)
167 3gw4_A Uncharacterized protein 99.4 1.4E-11 4.9E-16 116.3 17.0 159 8-166 2-177 (203)
168 2ifu_A Gamma-SNAP; membrane fu 99.4 4.1E-12 1.4E-16 129.7 14.2 134 1-136 79-230 (307)
169 3q15_A PSP28, response regulat 99.4 6.1E-12 2.1E-16 132.1 15.4 151 1-151 144-315 (378)
170 3ro2_A PINS homolog, G-protein 99.3 1.8E-12 6E-17 131.6 10.0 163 2-164 127-331 (338)
171 3k9i_A BH0479 protein; putativ 99.3 2.6E-12 8.9E-17 111.1 9.4 96 44-139 2-100 (117)
172 2qfc_A PLCR protein; TPR, HTH, 99.3 1.2E-11 4.2E-16 125.1 15.5 128 2-129 119-266 (293)
173 1wao_1 Serine/threonine protei 99.3 5.8E-13 2E-17 144.9 5.8 129 32-160 6-134 (477)
174 2kck_A TPR repeat; tetratricop 99.3 7.6E-12 2.6E-16 105.6 11.5 99 1-99 9-110 (112)
175 3dra_A Protein farnesyltransfe 99.3 1.3E-10 4.6E-15 118.1 22.4 142 6-147 40-193 (306)
176 3dra_A Protein farnesyltransfe 99.3 4E-11 1.4E-15 122.0 18.4 144 1-144 70-230 (306)
177 2ooe_A Cleavage stimulation fa 99.3 3.1E-11 1.1E-15 132.8 19.1 160 1-162 275-451 (530)
178 3u3w_A Transcriptional activat 99.3 6E-12 2E-16 127.5 12.1 127 3-129 120-266 (293)
179 1ihg_A Cyclophilin 40; ppiase 99.3 1.2E-11 4.1E-16 130.0 14.5 117 32-150 223-355 (370)
180 1uqt_A Alpha, alpha-trehalose- 99.3 1.7E-11 5.7E-16 132.9 15.9 175 356-543 254-454 (482)
181 2x0d_A WSAF; GT4 family, trans 99.3 8.8E-13 3E-17 140.7 5.7 158 360-544 244-410 (413)
182 2e2e_A Formate-dependent nitri 99.3 1.4E-11 4.9E-16 114.3 13.1 121 42-164 20-143 (177)
183 2c2l_A CHIP, carboxy terminus 99.3 1.1E-11 3.7E-16 125.1 13.1 106 29-134 1-106 (281)
184 3gw4_A Uncharacterized protein 99.3 9E-12 3.1E-16 117.7 11.4 130 1-130 29-177 (203)
185 1vgv_A UDP-N-acetylglucosamine 99.3 3.3E-12 1.1E-16 134.5 9.0 170 355-545 204-378 (384)
186 1dce_A Protein (RAB geranylger 99.3 3E-11 1E-15 133.9 16.4 140 1-140 66-232 (567)
187 3beo_A UDP-N-acetylglucosamine 99.3 8.4E-12 2.9E-16 130.8 11.0 166 354-541 203-374 (375)
188 2ooe_A Cleavage stimulation fa 99.3 8.6E-11 2.9E-15 129.3 19.5 165 1-167 324-494 (530)
189 2hy7_A Glucuronosyltransferase 99.3 6E-12 2E-16 134.0 9.1 167 327-543 198-379 (406)
190 4f3v_A ESX-1 secretion system 99.3 2.2E-11 7.5E-16 121.5 12.6 134 3-138 107-245 (282)
191 1hz4_A MALT regulatory protein 99.3 1.2E-10 4E-15 121.6 17.8 163 2-164 18-202 (373)
192 1dce_A Protein (RAB geranylger 99.2 1.5E-10 5.3E-15 128.2 19.3 141 7-147 37-191 (567)
193 3dss_A Geranylgeranyl transfer 99.2 3E-10 1E-14 116.3 19.6 139 2-140 68-233 (331)
194 4f3v_A ESX-1 secretion system 99.2 6.1E-11 2.1E-15 118.3 14.0 160 2-165 11-237 (282)
195 3rjv_A Putative SEL1 repeat pr 99.2 6.3E-11 2.2E-15 114.1 13.3 126 2-131 54-199 (212)
196 1hz4_A MALT regulatory protein 99.2 1.9E-10 6.6E-15 120.0 17.5 160 2-161 57-240 (373)
197 2if4_A ATFKBP42; FKBP-like, al 99.2 7.8E-12 2.7E-16 129.7 6.6 111 29-139 176-303 (338)
198 3e4b_A ALGK; tetratricopeptide 99.2 1.6E-10 5.6E-15 124.7 16.8 150 2-162 180-348 (452)
199 3otg_A CALG1; calicheamicin, T 99.2 4.1E-10 1.4E-14 119.6 19.6 167 354-542 240-409 (412)
200 3q7a_A Farnesyltransferase alp 99.2 4E-10 1.4E-14 116.0 18.6 139 8-146 64-213 (349)
201 3q7a_A Farnesyltransferase alp 99.2 2.4E-10 8.3E-15 117.6 16.9 141 1-141 91-249 (349)
202 2xm6_A Protein corresponding t 99.2 1.2E-09 4.1E-14 118.9 23.2 152 2-163 43-214 (490)
203 2kat_A Uncharacterized protein 99.2 9.4E-11 3.2E-15 100.6 11.1 82 16-97 3-84 (115)
204 2xm6_A Protein corresponding t 99.2 1.1E-09 3.9E-14 119.0 22.4 152 2-163 259-430 (490)
205 3dss_A Geranylgeranyl transfer 99.2 2.1E-09 7.3E-14 110.0 22.8 140 8-147 39-192 (331)
206 2l6j_A TPR repeat-containing p 99.2 2.5E-11 8.6E-16 102.7 5.7 95 31-125 3-103 (111)
207 1na3_A Designed protein CTPR2; 99.1 4.5E-10 1.5E-14 91.2 12.4 85 30-114 7-91 (91)
208 2kat_A Uncharacterized protein 99.1 1.9E-10 6.5E-15 98.7 9.9 85 49-133 2-86 (115)
209 3ro3_A PINS homolog, G-protein 99.1 5.3E-10 1.8E-14 100.3 13.2 134 32-165 9-158 (164)
210 1v4v_A UDP-N-acetylglucosamine 99.1 6E-10 2E-14 116.8 15.4 165 355-543 197-364 (376)
211 3tsa_A SPNG, NDP-rhamnosyltran 99.1 5.9E-09 2E-13 109.8 22.9 165 354-541 216-388 (391)
212 3t5t_A Putative glycosyltransf 99.1 9E-10 3.1E-14 118.3 15.7 176 356-546 280-476 (496)
213 2l6j_A TPR repeat-containing p 99.1 5.2E-11 1.8E-15 100.8 4.8 91 1-91 7-103 (111)
214 1na3_A Designed protein CTPR2; 99.0 1.9E-09 6.5E-14 87.4 11.5 80 1-80 12-91 (91)
215 3n71_A Histone lysine methyltr 99.0 8.4E-10 2.9E-14 119.7 12.1 123 6-128 317-463 (490)
216 3s2u_A UDP-N-acetylglucosamine 99.0 8.7E-10 3E-14 115.5 11.7 127 403-541 224-356 (365)
217 3e4b_A ALGK; tetratricopeptide 99.0 3.8E-09 1.3E-13 113.9 16.4 149 2-161 145-312 (452)
218 2kc7_A BFR218_protein; tetratr 99.0 5.9E-10 2E-14 92.6 7.6 89 37-133 5-94 (99)
219 1klx_A Cysteine rich protein B 99.0 6E-09 2E-13 93.0 14.7 117 12-138 9-133 (138)
220 3ma5_A Tetratricopeptide repea 99.0 1E-09 3.4E-14 92.0 8.7 70 62-131 3-72 (100)
221 2kc7_A BFR218_protein; tetratr 99.0 6.9E-10 2.3E-14 92.2 7.5 90 2-99 4-94 (99)
222 3mv2_B Coatomer subunit epsilo 99.0 1E-08 3.5E-13 103.5 16.7 136 2-140 104-261 (310)
223 3ma5_A Tetratricopeptide repea 99.0 2.7E-09 9.3E-14 89.3 10.5 86 27-112 2-89 (100)
224 3nb0_A Glycogen [starch] synth 99.0 5.8E-09 2E-13 114.4 15.8 135 404-546 474-636 (725)
225 3ly7_A Transcriptional activat 98.9 1.6E-08 5.6E-13 103.8 15.6 133 2-135 200-345 (372)
226 4b4t_Q 26S proteasome regulato 98.9 2.4E-08 8.4E-13 105.9 16.6 165 2-166 59-246 (434)
227 3ia7_A CALG4; glycosysltransfe 98.9 8.7E-08 3E-12 101.0 20.3 169 353-542 228-399 (402)
228 3rsc_A CALG2; TDP, enediyne, s 98.9 3.1E-07 1.1E-11 97.4 23.9 167 353-542 244-414 (415)
229 4b4t_Q 26S proteasome regulato 98.8 5.9E-08 2E-12 102.9 18.0 162 3-164 9-203 (434)
230 1xi4_A Clathrin heavy chain; a 98.8 3.8E-08 1.3E-12 115.2 17.0 113 1-126 1108-1247(1630)
231 2iyf_A OLED, oleandomycin glyc 98.8 1.9E-08 6.5E-13 107.4 12.5 169 354-544 230-402 (430)
232 3dzc_A UDP-N-acetylglucosamine 98.8 3.4E-08 1.2E-12 104.4 14.0 147 354-516 228-377 (396)
233 3oti_A CALG3; calicheamicin, T 98.8 2.6E-07 9E-12 97.5 19.9 160 354-540 230-396 (398)
234 3ot5_A UDP-N-acetylglucosamine 98.8 4E-08 1.4E-12 104.2 13.1 146 354-515 222-370 (403)
235 3n71_A Histone lysine methyltr 98.8 6.9E-08 2.4E-12 104.6 15.0 129 37-165 314-464 (490)
236 2o6l_A UDP-glucuronosyltransfe 98.7 2E-07 6.9E-12 86.0 15.3 137 355-512 20-160 (170)
237 1b89_A Protein (clathrin heavy 98.7 5.7E-08 1.9E-12 102.4 11.7 142 1-162 125-266 (449)
238 4fzr_A SSFS6; structural genom 98.7 8.9E-08 3E-12 101.1 11.9 162 354-538 225-397 (398)
239 1xi4_A Clathrin heavy chain; a 98.7 5.1E-07 1.8E-11 105.9 18.7 143 4-161 1055-1246(1630)
240 3mv2_B Coatomer subunit epsilo 98.6 3.3E-07 1.1E-11 92.5 14.8 147 17-166 85-241 (310)
241 1klx_A Cysteine rich protein B 98.6 4.3E-07 1.5E-11 80.7 12.8 99 4-108 31-137 (138)
242 1pc2_A Mitochondria fission pr 98.6 5.2E-07 1.8E-11 80.7 12.3 93 47-139 13-110 (152)
243 3bee_A Putative YFRE protein; 98.6 3.3E-07 1.1E-11 75.5 10.1 72 62-133 2-76 (93)
244 2p6p_A Glycosyl transferase; X 98.6 8.8E-07 3E-11 92.8 15.9 163 355-541 209-379 (384)
245 3qwp_A SET and MYND domain-con 98.5 2.8E-07 9.6E-12 98.3 10.4 95 42-136 297-412 (429)
246 3bee_A Putative YFRE protein; 98.5 5.2E-07 1.8E-11 74.3 9.6 73 28-100 2-77 (93)
247 1pc2_A Mitochondria fission pr 98.5 1E-06 3.5E-11 78.8 12.0 96 13-108 13-113 (152)
248 3qww_A SET and MYND domain-con 98.5 6.6E-07 2.3E-11 95.3 12.3 93 44-136 310-423 (433)
249 4amg_A Snogd; transferase, pol 98.5 3.4E-06 1.2E-10 88.7 17.2 163 353-539 234-398 (400)
250 3qww_A SET and MYND domain-con 98.4 3.4E-07 1.2E-11 97.5 9.2 94 10-103 310-424 (433)
251 2iya_A OLEI, oleandomycin glyc 98.4 4.5E-06 1.5E-10 88.7 17.8 165 354-541 253-421 (424)
252 1b89_A Protein (clathrin heavy 98.4 7.6E-07 2.6E-11 93.9 10.4 147 1-158 151-304 (449)
253 3u64_A Protein TP_0956; tetrat 98.4 1.2E-06 4E-11 86.6 11.0 107 27-133 147-273 (301)
254 2v5f_A Prolyl 4-hydroxylase su 98.4 2.8E-06 9.7E-11 71.4 12.0 75 33-107 6-87 (104)
255 2v5f_A Prolyl 4-hydroxylase su 98.4 2.9E-06 1E-10 71.3 12.1 77 65-141 4-87 (104)
256 4hwg_A UDP-N-acetylglucosamine 98.4 3.2E-07 1.1E-11 96.5 6.8 260 254-540 84-374 (385)
257 4e6h_A MRNA 3'-END-processing 98.3 6.8E-06 2.3E-10 92.4 16.6 149 15-165 326-499 (679)
258 2yjn_A ERYCIII, glycosyltransf 98.3 4.3E-06 1.5E-10 89.4 14.4 160 355-541 266-435 (441)
259 3qwp_A SET and MYND domain-con 98.3 1.9E-06 6.7E-11 91.7 11.2 99 6-104 295-414 (429)
260 1iir_A Glycosyltransferase GTF 98.2 1.4E-05 4.8E-10 84.7 15.8 157 357-539 239-398 (415)
261 4e6h_A MRNA 3'-END-processing 98.2 1.4E-05 4.9E-10 89.8 16.3 162 2-165 382-570 (679)
262 3rhz_A GTF3, nucleotide sugar 98.2 3.9E-06 1.3E-10 86.4 10.0 133 355-520 176-316 (339)
263 3ly7_A Transcriptional activat 98.2 2.8E-05 9.5E-10 79.9 15.4 138 23-163 185-337 (372)
264 3u64_A Protein TP_0956; tetrat 98.1 9.3E-06 3.2E-10 80.1 9.9 87 13-99 178-273 (301)
265 1rrv_A Glycosyltransferase GTF 98.0 3.8E-05 1.3E-09 81.4 14.1 137 357-515 238-378 (416)
266 3h4t_A Glycosyltransferase GTF 98.0 0.00012 4.2E-09 77.1 15.9 159 355-540 220-381 (404)
267 1nzn_A CGI-135 protein, fissio 97.9 8.9E-05 3E-09 63.8 11.4 94 46-139 15-113 (126)
268 2pq6_A UDP-glucuronosyl/UDP-gl 97.9 0.0002 7E-09 77.4 15.8 150 355-519 294-451 (482)
269 3hbf_A Flavonoid 3-O-glucosylt 97.8 0.00024 8.3E-09 75.9 15.9 148 354-517 271-424 (454)
270 2c1x_A UDP-glucose flavonoid 3 97.8 0.00013 4.3E-09 78.4 13.7 149 354-518 269-423 (456)
271 1nzn_A CGI-135 protein, fissio 97.8 0.00026 9E-09 60.8 11.7 98 12-109 15-117 (126)
272 4g26_A Pentatricopeptide repea 97.7 0.002 7E-08 69.8 20.9 156 6-164 34-203 (501)
273 2acv_A Triterpene UDP-glucosyl 97.7 0.00078 2.7E-08 72.3 17.3 145 355-511 275-431 (463)
274 2uy1_A Cleavage stimulation fa 97.6 0.0017 5.7E-08 70.3 18.6 138 14-155 195-373 (493)
275 4h7y_A Dual specificity protei 97.5 0.0015 5.2E-08 57.4 13.1 109 27-136 8-130 (161)
276 2uy1_A Cleavage stimulation fa 97.4 0.0052 1.8E-07 66.5 19.3 155 2-164 217-412 (493)
277 2vch_A Hydroquinone glucosyltr 97.4 0.0019 6.6E-08 69.6 15.5 143 355-511 267-437 (480)
278 3ffl_A Anaphase-promoting comp 97.4 0.00071 2.4E-08 60.8 9.4 127 5-146 27-165 (167)
279 3ffl_A Anaphase-promoting comp 97.2 0.0016 5.4E-08 58.5 10.1 115 33-161 21-147 (167)
280 1y8m_A FIS1; mitochondria, unk 97.1 0.014 4.9E-07 50.9 14.3 77 63-139 36-116 (144)
281 3o48_A Mitochondria fission 1 97.0 0.0075 2.6E-07 52.0 11.8 75 65-139 39-117 (134)
282 1y8m_A FIS1; mitochondria, unk 96.8 0.03 1E-06 48.9 14.0 80 29-108 36-119 (144)
283 4g26_A Pentatricopeptide repea 96.8 0.04 1.4E-06 59.6 18.5 120 13-132 85-209 (501)
284 1psw_A ADP-heptose LPS heptosy 96.7 0.012 4.2E-07 60.1 12.8 99 367-476 194-296 (348)
285 3o48_A Mitochondria fission 1 96.5 0.024 8.2E-07 48.8 11.0 79 31-109 39-121 (134)
286 4h7y_A Dual specificity protei 96.5 0.032 1.1E-06 49.1 11.7 97 5-102 20-130 (161)
287 4gns_B Protein CSD3, chitin bi 96.3 0.025 8.6E-07 63.6 12.7 115 11-126 261-397 (754)
288 3mkq_B Coatomer subunit alpha; 95.2 0.43 1.5E-05 43.4 14.1 102 7-126 14-115 (177)
289 1zbp_A Hypothetical protein VP 95.2 0.37 1.3E-05 46.7 14.3 59 8-66 7-65 (273)
290 3hbm_A UDP-sugar hydrolase; PS 95.1 0.05 1.7E-06 53.9 8.3 210 247-487 52-270 (282)
291 2ff4_A Probable regulatory pro 95.1 0.21 7.3E-06 51.8 13.4 107 9-128 126-233 (388)
292 3kae_A CDC27, possible protein 95.0 1.8 6.2E-05 38.7 18.7 92 4-100 39-148 (242)
293 2ff4_A Probable regulatory pro 95.0 0.26 9E-06 51.2 13.8 113 42-169 125-238 (388)
294 2gj4_A Glycogen phosphorylase, 94.8 0.37 1.3E-05 54.2 14.9 115 353-469 546-684 (824)
295 2jzc_A UDP-N-acetylglucosamine 94.8 0.045 1.5E-06 52.2 6.5 63 418-486 115-181 (224)
296 1ya0_A SMG-7 transcript varian 94.7 0.14 4.9E-06 54.8 11.1 73 68-140 154-226 (497)
297 3mkq_A Coatomer beta'-subunit; 94.5 0.43 1.5E-05 54.1 15.2 77 42-123 662-746 (814)
298 3kae_A CDC27, possible protein 94.5 0.5 1.7E-05 42.2 11.9 118 11-136 15-150 (242)
299 1ya0_A SMG-7 transcript varian 94.2 0.17 5.9E-06 54.2 10.4 81 33-113 153-233 (497)
300 3mkq_A Coatomer beta'-subunit; 94.1 0.84 2.9E-05 51.6 16.5 43 78-125 664-706 (814)
301 3txn_A 26S proteasome regulato 93.9 0.67 2.3E-05 48.0 13.8 161 2-162 23-207 (394)
302 1l5w_A Maltodextrin phosphoryl 93.7 1.5 5.1E-05 49.2 16.7 137 353-497 522-684 (796)
303 2c4m_A Glycogen phosphorylase; 93.6 0.57 2E-05 52.4 13.2 113 354-468 513-649 (796)
304 3tov_A Glycosyl transferase fa 93.1 0.29 1E-05 50.0 9.5 97 367-475 198-295 (349)
305 4gns_B Protein CSD3, chitin bi 91.9 0.78 2.7E-05 51.6 11.4 112 45-159 261-394 (754)
306 4b4t_S RPN3, 26S proteasome re 91.0 0.37 1.3E-05 51.3 7.3 125 8-134 146-304 (523)
307 3mkq_B Coatomer subunit alpha; 90.9 5.5 0.00019 36.0 14.0 81 30-126 6-86 (177)
308 3txn_A 26S proteasome regulato 90.8 3.2 0.00011 42.9 14.0 94 36-129 103-210 (394)
309 4fhn_B Nucleoporin NUP120; pro 90.7 3 0.0001 49.6 15.7 116 6-125 820-963 (1139)
310 3spa_A Mtrpol, DNA-directed RN 90.2 5.2 0.00018 46.3 16.0 97 33-129 128-230 (1134)
311 1zbp_A Hypothetical protein VP 89.5 9.6 0.00033 36.8 15.1 115 41-162 6-126 (273)
312 4b4t_R RPN7, 26S proteasome re 89.5 1.4 4.7E-05 46.3 10.3 98 32-129 131-237 (429)
313 4fhn_B Nucleoporin NUP120; pro 89.4 2.8 9.5E-05 49.9 13.8 163 2-166 846-1050(1139)
314 2gt1_A Lipopolysaccharide hept 88.9 1.6 5.6E-05 43.6 9.9 79 385-475 209-287 (326)
315 4b4t_R RPN7, 26S proteasome re 88.1 2.1 7.1E-05 44.9 10.4 96 2-97 135-239 (429)
316 4b4t_P 26S proteasome regulato 87.4 8.6 0.00029 40.4 14.7 17 254-270 378-394 (445)
317 3spa_A Mtrpol, DNA-directed RN 86.8 6 0.00021 45.7 13.5 94 3-96 132-231 (1134)
318 4b4t_P 26S proteasome regulato 85.8 9.7 0.00033 40.0 14.0 97 33-129 138-247 (445)
319 4b4t_S RPN3, 26S proteasome re 85.4 8.1 0.00028 41.1 13.0 66 32-99 231-303 (523)
320 1qsa_A Protein (soluble lytic 82.1 8.4 0.00029 42.3 12.0 120 8-128 224-347 (618)
321 2l2q_A PTS system, cellobiose- 76.9 6.2 0.00021 32.5 6.8 77 387-468 5-84 (109)
322 2wpv_A GET4, UPF0363 protein Y 76.6 62 0.0021 32.0 15.3 158 9-167 24-219 (312)
323 3nbm_A PTS system, lactose-spe 72.6 2.1 7.1E-05 35.5 2.7 81 386-471 6-89 (108)
324 1wy6_A Hypothetical protein ST 70.0 45 0.0015 28.8 10.3 119 6-129 15-154 (172)
325 1qsa_A Protein (soluble lytic 68.0 90 0.0031 34.0 15.4 115 14-129 268-410 (618)
326 1e2b_A Enzyme IIB-cellobiose; 68.0 5 0.00017 32.9 4.1 72 388-464 6-79 (106)
327 4gq2_M Nucleoporin NUP120; bet 66.9 39 0.0014 39.1 13.0 93 39-135 817-933 (950)
328 1ygp_A Yeast glycogen phosphor 66.2 37 0.0013 38.2 11.7 112 355-468 598-742 (879)
329 2f62_A Nucleoside 2-deoxyribos 59.5 31 0.0011 30.5 8.0 78 388-469 11-107 (161)
330 1wy6_A Hypothetical protein ST 57.4 40 0.0014 29.1 7.7 82 11-97 74-156 (172)
331 1tvm_A PTS system, galactitol- 56.8 16 0.00055 30.2 5.3 64 389-465 25-90 (113)
332 2w2u_A Hypothetical P60 katani 56.6 19 0.00065 28.0 5.3 16 77-92 30-45 (83)
333 2v6y_A AAA family ATPase, P60 54.9 21 0.00071 27.7 5.3 16 77-92 22-37 (83)
334 4ady_A RPN2, 26S proteasome re 54.5 90 0.0031 35.8 12.5 146 3-153 418-577 (963)
335 2hqs_H Peptidoglycan-associate 53.3 42 0.0014 27.7 7.4 74 372-445 23-113 (118)
336 4gq2_M Nucleoporin NUP120; bet 52.6 70 0.0024 36.9 11.7 33 26-58 834-866 (950)
337 2w2u_A Hypothetical P60 katani 52.4 17 0.00056 28.3 4.3 19 42-60 29-47 (83)
338 3mm4_A Histidine kinase homolo 52.4 1.1E+02 0.0037 27.5 11.1 109 387-505 62-195 (206)
339 2wpv_A GET4, UPF0363 protein Y 51.6 1.9E+02 0.0063 28.5 13.6 65 64-128 132-216 (312)
340 2v6y_A AAA family ATPase, P60 51.6 17 0.00059 28.2 4.3 31 15-60 9-39 (83)
341 1wfd_A Hypothetical protein 15 51.0 74 0.0025 25.1 8.1 13 79-91 28-40 (93)
342 3td3_A Outer membrane protein 50.6 33 0.0011 28.5 6.4 53 372-424 31-94 (123)
343 4fyk_A Deoxyribonucleoside 5'- 49.2 57 0.0019 28.5 7.8 73 431-504 62-140 (152)
344 2ijq_A Hypothetical protein; s 48.1 71 0.0024 28.1 8.3 55 41-95 41-104 (161)
345 3lpz_A GET4 (YOR164C homolog); 47.8 2.2E+02 0.0076 28.2 14.0 90 34-123 57-159 (336)
346 3esl_A Checkpoint serine/threo 47.5 1E+02 0.0036 28.2 9.5 70 62-132 76-147 (202)
347 3j20_B 30S ribosomal protein S 47.2 26 0.00088 32.3 5.5 88 378-469 56-143 (202)
348 3t5v_B Nuclear mRNA export pro 46.7 41 0.0014 35.2 7.6 87 47-133 141-254 (455)
349 2aiz_P Outer membrane protein 46.5 33 0.0011 29.2 5.8 53 372-424 47-109 (134)
350 2crb_A Nuclear receptor bindin 45.4 33 0.0011 27.1 4.9 25 68-92 17-41 (97)
351 2pln_A HP1043, response regula 45.4 1.2E+02 0.0042 24.6 11.5 106 386-504 18-131 (137)
352 3ax2_A Mitochondrial import re 45.1 46 0.0016 25.1 5.6 35 36-70 21-55 (73)
353 3ax2_A Mitochondrial import re 44.9 50 0.0017 24.9 5.8 34 70-103 21-54 (73)
354 2kgw_A Outer membrane protein 44.2 36 0.0012 28.6 5.7 53 372-424 41-103 (129)
355 2iz6_A Molybdenum cofactor car 44.2 29 0.001 31.2 5.3 65 436-505 106-173 (176)
356 3re2_A Predicted protein; meni 44.1 88 0.003 31.4 8.9 65 64-128 253-324 (472)
357 3en0_A Cyanophycinase; serine 43.2 43 0.0015 32.8 6.7 91 354-452 25-121 (291)
358 3esl_A Checkpoint serine/threo 43.1 2E+02 0.0067 26.3 11.4 74 87-161 58-140 (202)
359 1wfd_A Hypothetical protein 15 42.6 40 0.0014 26.7 5.3 13 83-95 13-25 (93)
360 3lpz_A GET4 (YOR164C homolog); 41.7 2.7E+02 0.0093 27.6 19.2 86 64-168 134-219 (336)
361 3oon_A Outer membrane protein 40.9 49 0.0017 27.4 6.0 54 371-424 33-97 (123)
362 3t5v_B Nuclear mRNA export pro 40.3 1.7E+02 0.0058 30.4 11.2 86 14-99 142-254 (455)
363 3sho_A Transcriptional regulat 40.2 1.5E+02 0.0051 26.1 9.7 95 369-469 24-123 (187)
364 2k1s_A Inner membrane lipoprot 39.2 53 0.0018 28.4 6.1 53 372-424 51-113 (149)
365 2cpt_A SKD1 protein, vacuolar 38.9 43 0.0015 27.9 5.1 15 77-91 29-43 (117)
366 2v6x_A Vacuolar protein sortin 38.2 53 0.0018 25.4 5.3 16 77-92 24-39 (85)
367 3u84_A Menin; MLL, JUND, ledgf 38.0 1.2E+02 0.004 31.1 8.8 64 65-128 276-346 (550)
368 2ixa_A Alpha-N-acetylgalactosa 37.0 88 0.003 32.4 8.5 82 378-465 36-120 (444)
369 4fb5_A Probable oxidoreductase 37.0 26 0.00088 35.4 4.3 95 358-465 26-123 (393)
370 4a5x_A MITD1, MIT domain-conta 36.6 52 0.0018 25.6 5.0 16 77-92 27-42 (86)
371 1vi6_A 30S ribosomal protein S 35.7 43 0.0015 30.9 5.1 93 373-469 55-147 (208)
372 2ijq_A Hypothetical protein; s 35.4 1.5E+02 0.0051 26.0 8.3 60 70-129 36-104 (161)
373 2cpt_A SKD1 protein, vacuolar 34.7 36 0.0012 28.3 4.0 32 14-60 15-46 (117)
374 3re2_A Predicted protein; meni 34.6 1E+02 0.0034 31.0 7.6 66 30-95 253-325 (472)
375 2v6x_A Vacuolar protein sortin 34.2 46 0.0016 25.7 4.3 32 14-60 10-41 (85)
376 4f3y_A DHPR, dihydrodipicolina 34.1 26 0.00089 34.0 3.5 36 430-465 66-102 (272)
377 3heb_A Response regulator rece 33.8 2E+02 0.0069 23.7 11.5 76 387-469 5-98 (152)
378 4gq4_A Menin; tumor suppressor 32.9 1.8E+02 0.0063 29.7 9.4 64 65-128 261-331 (489)
379 2crb_A Nuclear receptor bindin 32.8 65 0.0022 25.4 4.8 29 32-60 15-43 (97)
380 3uuw_A Putative oxidoreductase 32.7 48 0.0017 32.3 5.4 73 377-465 22-95 (308)
381 3t5x_A PCI domain-containing p 32.6 87 0.003 28.7 6.7 16 256-271 168-183 (203)
382 4had_A Probable oxidoreductase 32.2 99 0.0034 30.6 7.7 75 378-465 40-115 (350)
383 3db2_A Putative NADPH-dependen 32.1 88 0.003 31.1 7.3 76 376-465 19-95 (354)
384 3ldt_A Outer membrane protein, 31.9 87 0.003 27.7 6.4 53 372-424 71-133 (169)
385 3v5n_A Oxidoreductase; structu 31.6 77 0.0026 32.6 6.9 78 378-465 56-139 (417)
386 3cyp_B Chemotaxis protein MOTB 31.2 78 0.0027 26.8 5.8 53 372-424 21-88 (138)
387 3t5x_A PCI domain-containing p 30.2 95 0.0032 28.4 6.5 34 33-66 15-48 (203)
388 2czc_A Glyceraldehyde-3-phosph 30.0 42 0.0014 33.4 4.4 84 376-465 16-108 (334)
389 1hym_A CMTI-V, hydrolyzed cucu 29.5 19 0.00065 24.4 1.1 27 243-269 8-34 (45)
390 3l7i_A Teichoic acid biosynthe 29.5 1.8E+02 0.0062 32.2 10.0 116 417-543 598-718 (729)
391 2rpa_A Katanin P60 ATPase-cont 28.5 44 0.0015 25.6 3.2 24 3-26 17-40 (78)
392 3mz0_A Inositol 2-dehydrogenas 28.1 97 0.0033 30.7 6.8 77 377-465 17-95 (344)
393 4ady_A RPN2, 26S proteasome re 28.0 2.7E+02 0.0091 32.0 10.8 144 3-151 460-609 (963)
394 4gq4_A Menin; tumor suppressor 27.6 3.4E+02 0.012 27.8 10.2 67 29-95 259-332 (489)
395 1om2_A Protein (mitochondrial 27.5 71 0.0024 25.4 4.3 34 36-69 24-57 (95)
396 2rpa_A Katanin P60 ATPase-cont 26.8 60 0.0021 24.8 3.7 27 103-129 15-41 (78)
397 1k68_A Phytochrome response re 26.8 2.4E+02 0.0082 22.4 11.5 104 387-499 3-124 (140)
398 3kht_A Response regulator; PSI 26.7 2.6E+02 0.0087 22.7 10.8 77 386-469 5-90 (144)
399 1r1m_A Outer membrane protein 26.7 81 0.0028 27.8 5.2 53 372-424 32-94 (164)
400 3ic5_A Putative saccharopine d 26.7 2.3E+02 0.0078 22.1 8.2 45 424-468 56-101 (118)
401 3u84_A Menin; MLL, JUND, ledgf 26.5 1.6E+02 0.0054 30.2 7.5 65 30-94 275-346 (550)
402 1rcu_A Conserved hypothetical 26.5 49 0.0017 30.2 3.7 37 434-471 115-153 (195)
403 1s2d_A Purine trans deoxyribos 26.5 50 0.0017 29.3 3.7 36 432-467 76-116 (167)
404 2hlv_A Odorant-binding protein 26.5 81 0.0028 27.2 5.2 38 387-424 114-152 (160)
405 1f8y_A Nucleoside 2-deoxyribos 26.4 1.1E+02 0.0037 26.8 5.9 84 385-469 2-115 (157)
406 2fp4_B Succinyl-COA ligase [GD 26.4 2.3E+02 0.0078 28.8 9.2 47 459-506 348-394 (395)
407 3dty_A Oxidoreductase, GFO/IDH 26.3 68 0.0023 32.6 5.3 77 379-465 32-114 (398)
408 2hqr_A Putative transcriptiona 25.8 3.5E+02 0.012 24.0 10.1 98 398-505 9-114 (223)
409 1g60_A Adenine-specific methyl 25.6 39 0.0013 32.3 3.1 30 436-466 211-240 (260)
410 3u5c_A 40S ribosomal protein S 25.3 1E+02 0.0036 29.2 5.8 78 387-468 71-148 (252)
411 1e5p_A Aphrodisin; lipocalin, 25.1 87 0.003 26.6 5.1 38 387-424 107-145 (151)
412 4erh_A Outer membrane protein 25.1 55 0.0019 28.1 3.7 58 367-424 31-103 (148)
413 1ydw_A AX110P-like protein; st 24.9 1.3E+02 0.0044 30.0 7.0 76 378-465 22-100 (362)
414 1h6d_A Precursor form of gluco 24.4 70 0.0024 33.1 5.0 78 377-465 99-179 (433)
415 1om2_A Protein (mitochondrial 24.4 1.9E+02 0.0065 22.9 6.3 27 72-98 26-52 (95)
416 4hkt_A Inositol 2-dehydrogenas 24.3 1E+02 0.0035 30.2 6.1 75 376-465 17-92 (331)
417 3iz6_A 40S ribosomal protein S 23.9 98 0.0034 30.1 5.4 79 385-468 75-153 (305)
418 2khz_A C-MYC-responsive protei 23.8 1.2E+02 0.004 26.7 5.7 38 432-469 72-112 (165)
419 3ijp_A DHPR, dihydrodipicolina 23.6 94 0.0032 30.2 5.4 36 430-465 81-117 (288)
420 3e9m_A Oxidoreductase, GFO/IDH 23.5 1.3E+02 0.0044 29.6 6.6 74 377-465 20-96 (330)
421 3moi_A Probable dehydrogenase; 23.3 92 0.0031 31.5 5.6 74 378-465 19-93 (387)
422 2xzm_B RPS0E; ribosome, transl 23.2 1.2E+02 0.0043 28.5 5.9 88 378-469 57-146 (241)
423 2cfu_A SDSA1; SDS-hydrolase, l 23.1 1.3E+02 0.0044 33.1 7.1 46 69-114 452-497 (658)
424 2cwy_A Hypothetical protein TT 22.9 2.1E+02 0.0072 22.5 6.4 25 4-28 7-31 (94)
425 3euw_A MYO-inositol dehydrogen 22.9 1.2E+02 0.004 30.0 6.3 74 376-465 18-94 (344)
426 3lzd_A DPH2; diphthamide biosy 22.9 1.8E+02 0.0063 29.4 7.5 84 375-465 253-340 (378)
427 4a5x_A MITD1, MIT domain-conta 22.6 72 0.0025 24.8 3.5 33 14-61 13-45 (86)
428 1bj7_A D 2; allergen, lipocali 22.4 98 0.0034 26.5 4.9 38 387-424 112-150 (156)
429 1dzk_A PIG OBP, odorant-bindin 21.9 1E+02 0.0034 26.4 4.9 38 387-424 113-151 (157)
430 3bch_A 40S ribosomal protein S 20.9 81 0.0028 30.0 4.1 79 387-469 105-183 (253)
431 3p9z_A Uroporphyrinogen III co 20.8 55 0.0019 30.5 3.0 98 402-506 122-227 (229)
432 1boo_A Protein (N-4 cytosine-s 20.6 50 0.0017 32.7 2.8 30 436-466 251-280 (323)
433 3rc1_A Sugar 3-ketoreductase; 20.3 1.1E+02 0.0036 30.6 5.3 75 377-465 43-118 (350)
434 2cwy_A Hypothetical protein TT 20.1 2.6E+02 0.009 21.9 6.5 54 73-128 8-67 (94)
No 1
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=100.00 E-value=5.6e-110 Score=949.39 Aligned_cols=546 Identities=29% Similarity=0.436 Sum_probs=496.8
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
|++||.++.++|++++|+.+|+++++++|++..+++++|.+|.++|++++|+++|+++++++|+++.+++++|.++..+|
T Consensus 12 l~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g 91 (723)
T 4gyw_A 12 LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 91 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~ 160 (619)
++++|+++|+++++++|++..+++++|.+|..+|++++|+++|+++++++|++..++.+ ++..+...|+++++.+.++
T Consensus 92 ~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~--L~~~l~~~g~~~~A~~~~~ 169 (723)
T 4gyw_A 92 DVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCN--LAHCLQIVCDWTDYDERMK 169 (723)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHH--HHHHHHHTTCCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhh--hhhHHHhcccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988 7777888888887776665
Q ss_pred HHHHHHHhhc-------------------------------------------cCCCCCCCCCCCCCCccccccCCCCcc
Q 007075 161 DWGKRFMRLY-------------------------------------------SQYTSWDNTKDPERPLVIGYVSPDYFT 197 (619)
Q Consensus 161 ~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~LrIgyvs~~~~~ 197 (619)
+..+...... ++.......+.++++|||||+|++|++
T Consensus 170 kal~l~~~~~~~~~l~~~~~~~~l~~~~~~~~~~aia~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~klrIGyvS~df~~ 249 (723)
T 4gyw_A 170 KLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDFGN 249 (723)
T ss_dssp HHHHHHHHHHHTTCCCSSCTTGGGGSCCCHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCSSTTTTTCEEEEEEESCSSS
T ss_pred HHHHhChhHHhhccCcccchhhhhhhhcCHHHHHHHHHHHHHhhhhhhhcccCccccCccccccccccceeeeechhhcc
Confidence 5443321100 001111223456789999999999999
Q ss_pred ChHHHhhHhHhhhhcCCceEEEEEecCcC-CChhhHHHHHHHhhhCCeEEEcccC-CHHHHHHHhHhCCccEEEeCCCCC
Q 007075 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVK-ADAKTIRFREKVMKKGGIWRDIYGI-DEKKVAAMVREDKIDILVELTGHT 275 (619)
Q Consensus 198 h~v~~~~~~~l~~~d~~~fev~~ys~~~~-~D~~t~~~r~~~~~~~~~~~~~~~~-~~~~~~~~i~~d~~Dilvdl~g~t 275 (619)
|++++++..++.+||+.+||+++|+.++. .+..+.+++.. .+.|+++.++ ++.+++++||+|+|||||||+|||
T Consensus 250 H~v~~~~~~~~~~~d~~~fei~~y~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~~~a~~i~~d~iDIlidl~g~t 325 (723)
T 4gyw_A 250 HPTSHLMQSIPGMHNPDKFEVFCYALSPDDGTNFRVKVMAE----ANHFIDLSQIPCNGKAADRIHQDGIHILVNMNGYT 325 (723)
T ss_dssp SHHHHHHTTHHHHSCTTTEEEEEEESSCCCSCHHHHHHHHH----SSEEEEGGGCCCHHHHHHHHHHTTCSEEEESCSSB
T ss_pred CcHHHHHHHHHHHhccCceeEEEEEcCCCCccHHHHHHHHh----hccccccccCCcHHHHHHHHHhccceeEEeccCCC
Confidence 99999999999999999999999998754 35555555553 4899999998 689999999999999999999999
Q ss_pred CCCcchhhccCCcceeEecccCCCCCCCCCccEEEecCCCCCCCccCCCccceEEcCCCccccCCCCCCC----------
Q 007075 276 ANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFLCYTPSPEAG---------- 345 (619)
Q Consensus 276 ~~~r~~~~a~r~Apvq~~~~G~p~ttg~~~~Dy~i~d~~~~p~~~~~~~~E~l~~lp~~~~~~~p~~~~~---------- 345 (619)
.++|+.+|++|||||||+|||||+|||+++|||+|+|.+++|++.+.+|+||++|||++|+|++|....+
T Consensus 326 ~~~r~~i~a~r~APvQv~~lG~p~TtG~~~iDY~i~D~~~~P~~~~~~ysEklirLP~~~~~~d~~~~~p~~~~~~~~~~ 405 (723)
T 4gyw_A 326 KGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMPHTFFIGDHANMFPHLKKKAVIDF 405 (723)
T ss_dssp TTCCTHHHHTCCSSEEEECSSCSSCCCCTTCCEEEECTTTSCGGGGGGCSSEEEECSSCSCCCCHHHHCGGGSSCEEECC
T ss_pred CCCcchhhhcCCCCceeeeccCCCCCCCCcCCEEEeCCCCCCchhhhcceeeeeeCCCccccCCcccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999986321000
Q ss_pred --------------------------------------------------------------------------------
Q 007075 346 -------------------------------------------------------------------------------- 345 (619)
Q Consensus 346 -------------------------------------------------------------------------------- 345 (619)
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~g~~ 485 (723)
T 4gyw_A 406 KSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNADSSNTALNMPVIPMNTIAEAVIEMINRGQIQITINGFS 485 (723)
T ss_dssp C---CCCSSSEEEECTTHHHHHHTSSSCEEEC-----------------CEEEECSSHHHHHHHHHHHHTCCEEEETTEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence
Q ss_pred --------------------------CCCCCCCCCCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCH
Q 007075 346 --------------------------PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCD 399 (619)
Q Consensus 346 --------------------------~~~~~~~l~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~ 399 (619)
..+..++|+++.|||||||+++|++|+++++|++||+++|+|+|||+..+ .
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~R~~~gLp~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~---~ 562 (723)
T 4gyw_A 486 ISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFP---A 562 (723)
T ss_dssp EEETTCHHHHCHHHHHTSSCCCSEEEEEGGGGTCCTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETT---G
T ss_pred cccccccccccccccccccccccccccchhhcCCCCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCc---H
Confidence 01223579999999999999999999999999999999999999998654 2
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHH
Q 007075 400 SVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL 479 (619)
Q Consensus 400 ~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~ 479 (619)
..+.++++.+++.||+++||+|.|..+ ..+|++.|+.+||+|||||||||||++|||||||||||+.|++|+||+|+|+
T Consensus 563 ~~~~~l~~~~~~~gi~~~r~~f~~~~~-~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~ 641 (723)
T 4gyw_A 563 VGEPNIQQYAQNMGLPQNRIIFSPVAP-KEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQ 641 (723)
T ss_dssp GGHHHHHHHHHHTTCCGGGEEEEECCC-HHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHH
T ss_pred HHHHHHHHHHHhcCCCcCeEEECCCCC-HHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHH
Confidence 456889999999999999999999987 7999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCccccCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHhcCCCCCch
Q 007075 480 LTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCKGDVPSLK 556 (619)
Q Consensus 480 l~~~gl~~~v~~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~~~~~g~~p~~~ 556 (619)
|.++|++|||+.|+++|+++|++|++|++.++++|+++|+++..+++||.++|++.||++|++||++||+|++|+..
T Consensus 642 l~~~gl~e~ia~~~~~Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~~~G~~p~~~ 718 (723)
T 4gyw_A 642 LTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHYAAGNKPDHM 718 (723)
T ss_dssp HHHHTCGGGBCSSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHHHTTCCCCCB
T ss_pred HHHcCCcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999853
No 2
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=100.00 E-value=9.7e-75 Score=628.74 Aligned_cols=350 Identities=17% Similarity=0.203 Sum_probs=314.9
Q ss_pred CCCCCccccccCCCCccChHHHhhHhHhhhhcCCceEEEEEecCcCCChhhHHHHHHHhhhCCeEEEcccCC----HHHH
Q 007075 181 DPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGID----EKKV 256 (619)
Q Consensus 181 ~~~~~LrIgyvs~~~~~h~v~~~~~~~l~~~d~~~fev~~ys~~~~~D~~t~~~r~~~~~~~~~~~~~~~~~----~~~~ 256 (619)
.+++++++||+|.++++|++.++....+.+ |+.+|||+||+ ++..|+.+ ++ ..+.|+++.+++ ++++
T Consensus 271 ~~~K~l~ig~ls~f~~~HsV~r~~~~~l~~-dR~~FEV~~Ys-~~~~D~~t---r~----~~d~f~~l~~~s~~~~~~~i 341 (631)
T 3q3e_A 271 RNNKPVMVVLLEHFHSAHSIYRTHSTSMIA-AREHFYLIGLG-SPSVDQAG---QE----VFDEFHLVAGDNMKQKLEFI 341 (631)
T ss_dssp ETTEEEEEEECSSCCTTSHHHHHHHHHHHH-HTTTSEEEEEE-CTTSCHHH---HT----TSSEEEECCCSSHHHHHHHH
T ss_pred CCCCeEEEEEeCcccCCCcHHHHHHHHHHh-hhhcEEEEEEe-CCCCCHHH---Hh----cCcEEEECCCCCccccHHHH
Confidence 457889999999999999999888888876 89999999999 76778765 22 358999999998 7899
Q ss_pred HHHhHhCCccEEEeCCCCCCCCcchhhccCCcceeEecccCCCCCCCCCccEEEecCCCCCCCccCCCccceEEcCCCcc
Q 007075 257 AAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELIRLPECFL 336 (619)
Q Consensus 257 ~~~i~~d~~Dilvdl~g~t~~~r~~~~a~r~Apvq~~~~G~p~ttg~~~~Dy~i~d~~~~p~~~~~~~~E~l~~lp~~~~ 336 (619)
+++|++|+|||||||+|||.+.++.++++|||||||+|||||+|||+++|||+|+|..+.| .+.+|+|+++|||++++
T Consensus 342 a~~Ir~d~IDILVdL~g~t~~~~i~~aa~RpAPVQvs~lGyp~TTGl~~iDY~i~D~~~~~--~~~~ysEklirLP~~~~ 419 (631)
T 3q3e_A 342 RSVCESNGAAIFYMPSIGMDMTTIFASNTRLAPIQAIALGHPATTHSDFIEYVIVEDDYVG--SEECFSETLLRLPKDAL 419 (631)
T ss_dssp HHHHHHHTCSEEEESCCSSSHHHHHHTTSCCSSEEEEECSSCSCCCCTTCCEEEEEGGGCC--CGGGCSSEEEEECTTSS
T ss_pred HHHHHhcCCCEEEECCCCCCchhHHHHhCCCchheEeccCCCcccCcccCCEEEeCCCCCC--cccCceeeEEECCCCcc
Confidence 9999999999999999999766666677999999999999999999999999999997665 58899999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCC--CCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEe--ccCCCCHHHHHHHHHHHHHc
Q 007075 337 CYTPSPEAGPVCPTPALTN--GFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVK--CKPFCCDSVRHRFLSTLEQL 412 (619)
Q Consensus 337 ~~~p~~~~~~~~~~~~l~~--~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~--g~~~~~~~~~~~l~~~~~~~ 412 (619)
||+|+...|.+.+ +++++ |.|||||||++.|++|+++++|++||+++|+++||+. |.+ +.....+.+++.++
T Consensus 420 ~~~p~~~~p~r~~-~~lp~~~G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~---~g~~~~~~~~~~~~ 495 (631)
T 3q3e_A 420 PYVPSALAPEKVD-YLLRENPEVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS---NGITHPYVERFIKS 495 (631)
T ss_dssp CCCCCTTCCSSCC-CCCCSCCSEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC---CGGGHHHHHHHHHH
T ss_pred ccCCcccCCcccc-ccCCcCCCeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC---chhhHHHHHHHHHc
Confidence 9999877655444 34443 6999999999999999999999999999999999754 421 13345555677889
Q ss_pred CCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCcc-ccC
Q 007075 413 GLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL-IAK 491 (619)
Q Consensus 413 Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~-v~~ 491 (619)
||+ +||+|.|.++ ..+|++.|+.+|||||||||+||+|++|||||||||||+.|+.+++|+|+++|..+|++|| |+.
T Consensus 496 GI~-~Rv~F~g~~p-~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~ 573 (631)
T 3q3e_A 496 YLG-DSATAHPHSP-YHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN 573 (631)
T ss_dssp HHG-GGEEEECCCC-HHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES
T ss_pred CCC-ccEEEcCCCC-HHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC
Confidence 998 8999999998 7999999999999999999999999999999999999999999999999999999999995 999
Q ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHhc
Q 007075 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYCK 549 (619)
Q Consensus 492 ~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~~~~~ 549 (619)
|+++|+++|++|++|+++++++|+++|+++..+++|| ++++++|+.|+++|++|.+
T Consensus 574 d~eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~~w~~ 629 (631)
T 3q3e_A 574 TVDEYVERAVRLAENHQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLNAFLK 629 (631)
T ss_dssp SHHHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999998899999 8899999999999999975
No 3
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=100.00 E-value=3.4e-63 Score=555.09 Aligned_cols=526 Identities=22% Similarity=0.283 Sum_probs=431.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+++|.++...|++++|+.+|+++++.+|++..++.++|.++..+|++++|+++|+++++++|++..++.++|.++..+|+
T Consensus 27 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 106 (568)
T 2vsy_A 27 LMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQ 106 (568)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Confidence 56777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA---GSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA 158 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~---g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~ 158 (619)
+++|+++|+++++++|++..++.++|.++..+ |++++|++.|+++++.+|++...+.. ++ ..+.+.....
T Consensus 107 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~--l~-----~~~~~~~~~~ 179 (568)
T 2vsy_A 107 AEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVEPFAF--LS-----EDASAAEQLA 179 (568)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSCHHHH--TT-----SCCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccChHHH--hC-----CCCHHHHHHH
Confidence 77777777777777777777777777777777 77777777777777777776655443 21 3333333333
Q ss_pred HHHHHHH-HHhhccCCCCCCCCCCCCCCccccccCCCCccChHHHhhHhHhhh--hcCCceEEEEEecCcC-CChhhHHH
Q 007075 159 HRDWGKR-FMRLYSQYTSWDNTKDPERPLVIGYVSPDYFTHSVSYFIEAPLVY--HDYQNYKVVVYSAVVK-ADAKTIRF 234 (619)
Q Consensus 159 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~LrIgyvs~~~~~h~v~~~~~~~l~~--~d~~~fev~~ys~~~~-~D~~t~~~ 234 (619)
.+.|..+ +.....+ ..+.+..+.+++||++++.++..|++..++..++.. +++.+||+++|+..+. .+....++
T Consensus 180 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~ 257 (568)
T 2vsy_A 180 CARTRAQAIAASVRP--LAPTRVRSKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRL 257 (568)
T ss_dssp HHHHHHHHHHTTCCC--CCCCCCCSSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHH
T ss_pred HHHHHHhccCcccCC--CCCCCCCCCCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHH
Confidence 3444332 2221111 112233457889999999999999999999999988 8999999999997643 34444444
Q ss_pred HHHHhhhCCeEEEcccCCHHHHHHHhHhCCccEEEeCCCCCCCCcchhhccCCcceeEecccCCCCCCCCCccEEEecCC
Q 007075 235 REKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSL 314 (619)
Q Consensus 235 r~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~Dilvdl~g~t~~~r~~~~a~r~Apvq~~~~G~p~ttg~~~~Dy~i~d~~ 314 (619)
+. .+ .|+.+..++..++.+.|+++++||++++++|+.++++++++.|++|+|++|+|||.++|++.+||+++|.+
T Consensus 258 ~~----~~-~~~~~~~~~~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 332 (568)
T 2vsy_A 258 AQ----AS-TLHDVTALGHLATAKHIRHHGIDLLFDLRGWGGGGRPEVFALRPAPVQVNWLAYPGTSGAPWMDYVLGDAF 332 (568)
T ss_dssp HH----TS-EEEECTTCCHHHHHHHHHHTTCSEEEECSSCTTCSSCHHHHTCCSSEEEEESSSSSCCCCTTCCEEEECTT
T ss_pred Hh----cC-eEEECCCCCHHHHHHHHHhCCCCEEEECCCCCCcchHHHHhcCCCceeEeeecCCcccCCCCceEEEECCC
Confidence 33 23 67788777889999999999999999999999988999999999999999999999999999999999999
Q ss_pred CCCCCccCCCccceEEcCCCccccCCCCCCC-----CCCCCCCCCCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceE
Q 007075 315 ADPPETKQKHVEELIRLPECFLCYTPSPEAG-----PVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL 389 (619)
Q Consensus 315 ~~p~~~~~~~~E~l~~lp~~~~~~~p~~~~~-----~~~~~~~l~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l 389 (619)
+.+++....|.|++..+|+ +|.|....+ +.+...+++++.++|++.+...|+.+.++++|.+|+++.|+++|
T Consensus 333 i~~s~~~~~~~~~i~~ipn---~~~~~~~~~~~~~~~~r~~~~~~~~~~v~~~g~~~~K~~~~li~a~~~l~~~~~~~~l 409 (568)
T 2vsy_A 333 ALPPALEPFYSEHVLRLQG---AFQPSDTSRVVAEPPSRTQCGLPEQGVVLCCFNNSYKLNPQSMARMLAVLREVPDSVL 409 (568)
T ss_dssp TSCTTTGGGCSSEEEECSS---CSCCCCTTCCCCCCCCTGGGTCCTTSCEEEECCCGGGCCHHHHHHHHHHHHHCTTCEE
T ss_pred cCCcccccCCcceeEcCCC---cCCCCCCCCCCCCCCCccccCCCCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCcEE
Confidence 9999888889999999998 355543221 22333457788888877665579999999999999999999999
Q ss_pred EEec-cCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccC
Q 007075 390 VVKC-KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG 468 (619)
Q Consensus 390 ~l~g-~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g 468 (619)
+|+| .| +.++.+++.++++|++++||+|+|.++ ..++..+|+.+||||+|+++++|+|++|||+||+|||++.|
T Consensus 410 ~i~G~~g----~~~~~l~~~~~~~~l~~~~v~~~g~~~-~~~~~~~~~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g 484 (568)
T 2vsy_A 410 WLLSGPG----EADARLRAFAHAQGVDAQRLVFMPKLP-HPQYLARYRHADLFLDTHPYNAHTTASDALWTGCPVLTTPG 484 (568)
T ss_dssp EEECCST----THHHHHHHHHHHTTCCGGGEEEECCCC-HHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCC
T ss_pred EEecCCH----HHHHHHHHHHHHcCCChhHEEeeCCCC-HHHHHHHHhcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccC
Confidence 9999 54 678999999999999878999999987 57999999999999999999889999999999999999999
Q ss_pred CccccchhHHHHHhcCCCccccCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHh
Q 007075 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRYC 548 (619)
Q Consensus 469 ~~~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~~~~ 548 (619)
..+.++++++++...|++++|.+|+++|++.+.+|+.|++.++++++..+++......|+++.++++++++|+++|++||
T Consensus 485 ~~~~s~~~~~~l~~~g~~e~v~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~ 564 (568)
T 2vsy_A 485 ETFAARVAGSLNHHLGLDEMNVADDAAFVAKAVALASDPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHG 564 (568)
T ss_dssp SSGGGSHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred CCchHHHHHHHHHHCCChhhhcCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999886445779999999999999999999998
Q ss_pred c
Q 007075 549 K 549 (619)
Q Consensus 549 ~ 549 (619)
+
T Consensus 565 ~ 565 (568)
T 2vsy_A 565 W 565 (568)
T ss_dssp C
T ss_pred h
Confidence 6
No 4
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.86 E-value=6.5e-20 Score=172.33 Aligned_cols=162 Identities=26% Similarity=0.374 Sum_probs=156.1
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
|+++|.++...|++++|+.+|+++++++|+++.++.++|.++...|++++|+..+++++...|++..++..+|.++...+
T Consensus 8 y~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (184)
T 3vtx_A 8 YMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMID 87 (184)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~ 160 (619)
++++|+..++++++.+|++..++..+|.++..+|++++|++.|+++++++|++..++.+ ++.+|...|++++|.+.++
T Consensus 88 ~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~--lg~~~~~~g~~~~A~~~~~ 165 (184)
T 3vtx_A 88 EKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQS--IGLAYEGKGLRDEAVKYFK 165 (184)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHH--HHHHHHHCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998887 7888999999999998887
Q ss_pred HHHH
Q 007075 161 DWGK 164 (619)
Q Consensus 161 ~~~~ 164 (619)
+..+
T Consensus 166 ~al~ 169 (184)
T 3vtx_A 166 KALE 169 (184)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7644
No 5
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.85 E-value=7.4e-20 Score=177.82 Aligned_cols=162 Identities=22% Similarity=0.273 Sum_probs=154.4
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ- 79 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~- 79 (619)
++++|.++...|++++|+..|+++++.+|+++.+++++|.++...|++++|+..|+++++++|++..++.++|.++..+
T Consensus 8 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~ 87 (217)
T 2pl2_A 8 PLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALY 87 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhh
Confidence 3689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 007075 80 ----------GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149 (619)
Q Consensus 80 ----------g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~ 149 (619)
|++++|+..|+++++++|+++.++.++|.++..+|++++|+..|+++++++ +++.++.+ ++..+...
T Consensus 88 ~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~--la~~~~~~ 164 (217)
T 2pl2_A 88 RQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSA--LAELYLSM 164 (217)
T ss_dssp HTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHH--HHHHHHHH
T ss_pred hhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHH--HHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999 88888777 78889999
Q ss_pred CCcHHHHHHHHHHHHH
Q 007075 150 GHDDKLFEAHRDWGKR 165 (619)
Q Consensus 150 g~~~~a~~~~~~~~~~ 165 (619)
|+++++.+.+++..+.
T Consensus 165 g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 165 GRLDEALAQYAKALEQ 180 (217)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999998888776543
No 6
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.84 E-value=9.5e-20 Score=177.03 Aligned_cols=158 Identities=19% Similarity=0.235 Sum_probs=141.0
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhhCCCCHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDR-----------DNLDKAVECYQMALSIKPNFSQSL 69 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~-----------g~~~~A~~~~~~al~l~p~~~~~~ 69 (619)
++++|.++...|++++|+..|+++++++|++..+++++|.++... |++++|+..|+++++++|++..++
T Consensus 42 ~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 121 (217)
T 2pl2_A 42 LYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLH 121 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHH
Confidence 468999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE 149 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~ 149 (619)
.++|.++..+|++++|+..|+++++++ +++.+++++|.+|..+|++++|+..|+++++++|++..++.+ ++..+...
T Consensus 122 ~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~--la~~~~~~ 198 (217)
T 2pl2_A 122 LQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVR--YASALLLK 198 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHH--HHHHHTC-
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHH--HHHHHHHc
Confidence 999999999999999999999999999 999999999999999999999999999999999999988877 78888999
Q ss_pred CCcHHHHHHHHH
Q 007075 150 GHDDKLFEAHRD 161 (619)
Q Consensus 150 g~~~~a~~~~~~ 161 (619)
|+++++.+.+++
T Consensus 199 g~~~~A~~~~~~ 210 (217)
T 2pl2_A 199 GKAEEAARAAAL 210 (217)
T ss_dssp ------------
T ss_pred cCHHHHHHHHHH
Confidence 999888776654
No 7
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.82 E-value=4.5e-20 Score=168.57 Aligned_cols=147 Identities=15% Similarity=0.109 Sum_probs=132.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 007075 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKM 82 (619)
Q Consensus 3 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~ 82 (619)
.||.++...|++++|+..+++++..+|+++.+++++|.+|...|++++|+++|+++++++|+++.++.++|.++...|++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHHHhhcCC
Q 007075 83 DAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA-YEQCLKIDPDSRNAGQNRLLAMNYINEGH 151 (619)
Q Consensus 83 ~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~-~~~al~~~P~~~~a~~~~~la~~~~~~g~ 151 (619)
++|+.+|+++++++|+++.+++++|.+|..+|++++|... ++++++++|+++.++.. .+.++...|+
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l--~~~ll~~~G~ 149 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKL--KEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHH--HHHHHHTCCC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHH--HHHHHHHhCc
Confidence 9999999999999999999999999999999999887765 59999999999987654 5555555554
No 8
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.81 E-value=3.1e-18 Score=183.04 Aligned_cols=342 Identities=11% Similarity=0.065 Sum_probs=220.2
Q ss_pred CCccccccCCCCccChHHHhhHhHhhhhcCCceEEEEEecCcCCChh--hHHHHHHHhhhCCeEEEcccCCH--------
Q 007075 184 RPLVIGYVSPDYFTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAK--TIRFREKVMKKGGIWRDIYGIDE-------- 253 (619)
Q Consensus 184 ~~LrIgyvs~~~~~h~v~~~~~~~l~~~d~~~fev~~ys~~~~~D~~--t~~~r~~~~~~~~~~~~~~~~~~-------- 253 (619)
++.+|.+++..+....+......+...+...++++.+++.....+.. ...+..... +.. ...+..
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~ 113 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQ--GNE---SLKLTEEMKELYLN 113 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHT--TCC---SCCCCHHHHHHHHH
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccceeec--ccc---cccccHHHHHHHHH
Confidence 34688888777655666666655655555556787766554321110 011111110 000 111111
Q ss_pred --HHHHHHhHhCCccEEEeCCCCCCCCcchhhccCCcceeEecccCCCCCC----------CCCccEEEecCCCCCCCcc
Q 007075 254 --KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTG----------LPTIDYRITDSLADPPETK 321 (619)
Q Consensus 254 --~~~~~~i~~d~~Dilvdl~g~t~~~r~~~~a~r~Apvq~~~~G~p~ttg----------~~~~Dy~i~d~~~~p~~~~ 321 (619)
..+.+.|+..++||++--+.+.. .+..++.+..|+-++..+...... +...|.++.. ......
T Consensus 114 ~~~~~~~~l~~~~~Dvv~~~~~~~~--~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~i~~---~s~~~~ 188 (416)
T 2x6q_A 114 VNRENSKFIDLSSFDYVLVHDPQPA--ALIEFYEKKSPWLWRCHIDLSSPNREFWEFLRRFVEKYDRYIFH---LPEYVQ 188 (416)
T ss_dssp HHHHHHHSSCGGGSSEEEEESSTTG--GGGGGSCCCSCEEEECCSCCSSCCHHHHHHHHHHHTTSSEEEES---SGGGSC
T ss_pred HHHHHHHHHhhcCCCEEEEeccchh--hHHHHHHhcCCEEEEEccccCCccHHHHHHHHHHHHhCCEEEEe---chHHHH
Confidence 23556677789999986543332 222223333676665544322111 2334555421 111222
Q ss_pred CCCc-cceEEcCCCccccCCCCCCCC------CCCCCCCCCCCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEe
Q 007075 322 QKHV-EELIRLPECFLCYTPSPEAGP------VCPTPALTNGFITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVK 392 (619)
Q Consensus 322 ~~~~-E~l~~lp~~~~~~~p~~~~~~------~~~~~~l~~~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~ 392 (619)
..+. +++..+|++.......+...+ .+...+++++.+++++++++ .|..+.++++|..+.++.|+.+|+++
T Consensus 189 ~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~ 268 (416)
T 2x6q_A 189 PELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLV 268 (416)
T ss_dssp TTSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred hhCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 2333 788889875321110000000 01123456677789999988 69999999999999999999999999
Q ss_pred ccCCCC-HHHHHHHHHHHHHcCCCCCcEEEcCCccC--cHHHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccC
Q 007075 393 CKPFCC-DSVRHRFLSTLEQLGLESLRVDLLPLILL--NHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAG 468 (619)
Q Consensus 393 g~~~~~-~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~--~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g 468 (619)
|.+... +...+.+++..++.|+. ++|+|+|+++. ..+...+|+.+|+++.|+.+ ++|++++|||++|+|||+...
T Consensus 269 G~g~~~~~~~~~~l~~~~~~~~~~-~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~ 347 (416)
T 2x6q_A 269 GVMAHDDPEGWIYFEKTLRKIGED-YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV 347 (416)
T ss_dssp ECCCTTCHHHHHHHHHHHHHHTTC-TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC
T ss_pred ecCcccchhHHHHHHHHHHHhCCC-CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC
Confidence 977422 34567788888999997 89999997642 35788999999999999977 779999999999999998543
Q ss_pred CccccchhHHHHHhcCCCccccCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHH
Q 007075 469 SVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544 (619)
Q Consensus 469 ~~~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~ 544 (619)
. |..-+-.-|..+++..|.+++++...+++.|++.+++++++.++.... .|+++.++++++++|+++.
T Consensus 348 ~------g~~e~i~~~~~g~l~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~--~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 348 G------GIKFQIVDGETGFLVRDANEAVEVVLYLLKHPEVSKEMGAKAKERVRK--NFIITKHMERYLDILNSLG 415 (416)
T ss_dssp H------HHHHHCCBTTTEEEESSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH--HTBHHHHHHHHHHHHHTC-
T ss_pred C------CChhheecCCCeEEECCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHhh
Confidence 1 222222235566777799999999999999999999999998887643 3899999999999998753
No 9
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.79 E-value=4.2e-18 Score=165.81 Aligned_cols=150 Identities=18% Similarity=0.247 Sum_probs=140.3
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNP-HCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p-~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 79 (619)
++++|.++...|++++|+.+|+++++.+| .+..+++++|.++...|++++|+++|+++++++|++..++.++|.++..+
T Consensus 10 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 89 (228)
T 4i17_A 10 LKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDM 89 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHhhcC
Q 007075 80 GKMDAAAEMIEKAIAANPTYA-------EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD--SRNAGQNRLLAMNYINEG 150 (619)
Q Consensus 80 g~~~eA~~~~~~al~~~p~~~-------~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~--~~~a~~~~~la~~~~~~g 150 (619)
|++++|+..++++++++|+++ .++.++|.++..+|++++|+..|+++++++|+ +..++.+ ++.+|...|
T Consensus 90 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~--l~~~~~~~~ 167 (228)
T 4i17_A 90 KNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYS--LGVLFYNNG 167 (228)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHH--HHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHH--HHHHHHHHH
Confidence 999999999999999999998 67999999999999999999999999999999 8787777 566666555
Q ss_pred Cc
Q 007075 151 HD 152 (619)
Q Consensus 151 ~~ 152 (619)
..
T Consensus 168 ~~ 169 (228)
T 4i17_A 168 AD 169 (228)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 10
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.79 E-value=2.7e-18 Score=181.37 Aligned_cols=153 Identities=12% Similarity=0.075 Sum_probs=144.1
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN-LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~-~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 79 (619)
|+++|.++...|++++|+..|+++++++|++..+|+++|.++..+|+ +++|+.+|+++++++|++..+|+++|.++..+
T Consensus 100 ~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~ 179 (382)
T 2h6f_A 100 YDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL 179 (382)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh-cCCcHHH
Q 007075 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN-EGHDDKL 155 (619)
Q Consensus 80 g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~-~g~~~~a 155 (619)
|++++|+.+|+++++++|++..+|+++|.++..+|++++|+.+|+++++++|++..++.+ ++.++.. .+..+++
T Consensus 180 g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~--lg~~l~~l~~~~~eA 254 (382)
T 2h6f_A 180 RDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQ--RYFVISNTTGYNDRA 254 (382)
T ss_dssp TCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCSCSHH
T ss_pred cCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHhcCcchHH
Confidence 999999999999999999999999999999999999999999999999999999999998 5555666 4553555
No 11
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.78 E-value=2.8e-18 Score=183.15 Aligned_cols=336 Identities=11% Similarity=0.054 Sum_probs=211.9
Q ss_pred cccccCCCC-ccChHHHhhHhHhhhhcCCceEEEEEecCcCCCh-----h--hHHHHHHHhhhCCeEEEcccCCHHHHHH
Q 007075 187 VIGYVSPDY-FTHSVSYFIEAPLVYHDYQNYKVVVYSAVVKADA-----K--TIRFREKVMKKGGIWRDIYGIDEKKVAA 258 (619)
Q Consensus 187 rIgyvs~~~-~~h~v~~~~~~~l~~~d~~~fev~~ys~~~~~D~-----~--t~~~r~~~~~~~~~~~~~~~~~~~~~~~ 258 (619)
+|.+++..+ ....+..+...+...+... .++.+++....+.. . ........ . +..........+.+
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~l~~ 75 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHV----R-GLNEQGFYYSGLSE 75 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHH----T-TCCSTTCCHHHHHH
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccc----c-ccccccchHHHHHH
Confidence 455555432 2344555555565555555 77776654322100 0 11111111 1 11111345667899
Q ss_pred HhHhCCccEEEeCCCCCCCCcchhh----ccCCccee-EecccCCCC-------CCCCC--ccEEEecCCCCCCCccCC-
Q 007075 259 MVREDKIDILVELTGHTANNKLGMM----ACQPAPVQ-VTWIGYPNT-------TGLPT--IDYRITDSLADPPETKQK- 323 (619)
Q Consensus 259 ~i~~d~~Dilvdl~g~t~~~r~~~~----a~r~Apvq-~~~~G~p~t-------tg~~~--~Dy~i~d~~~~p~~~~~~- 323 (619)
.|+..++||++-.. ....+..+ ...|-... +.++..... .-+.. +|.+++-.-..-.....+
T Consensus 76 ~l~~~~~Div~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~S~~~~~~~~~~~ 152 (413)
T 3oy2_A 76 FIDVHKPDIVMIYN---DPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDICNYG 152 (413)
T ss_dssp HHHHHCCSEEEEEE---CHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCCGGGGGGGGCTTEEEEEESSTHHHHHHHHTT
T ss_pred HHHhcCCCEEEEcc---hHHHHHHHHHHhccCCCCCceeeeccccchhhHHHHHHHHhccCCceEEEcCHHHHHHHHHcC
Confidence 99999999997541 11111111 11111112 112211111 11223 337665321110001122
Q ss_pred CccceEEcCCCccccCCCCCCCCCCCCCCCCC--CCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEeccCCCC-
Q 007075 324 HVEELIRLPECFLCYTPSPEAGPVCPTPALTN--GFITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVKCKPFCC- 398 (619)
Q Consensus 324 ~~E~l~~lp~~~~~~~p~~~~~~~~~~~~l~~--~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~- 398 (619)
..+++..+|++. ++... ...+...++++ +.++|++++++ .|..+.++++|.++.++.|+.+|+++|.+...
T Consensus 153 ~~~~~~vi~ngv---d~~~~-~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~ 228 (413)
T 3oy2_A 153 CKVPINIVSHFV---DTKTI-YDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHES 228 (413)
T ss_dssp CCSCEEECCCCC---CCCCC-TTHHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTC
T ss_pred CCCceEEeCCCC---CHHHH-HHHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccc
Confidence 257888888753 11111 11222334555 77899999998 79999999999999999999999999977321
Q ss_pred -HHHHHHHHHHHHHcCCCCCc-------EEEcCCccCcHHHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCC
Q 007075 399 -DSVRHRFLSTLEQLGLESLR-------VDLLPLILLNHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGS 469 (619)
Q Consensus 399 -~~~~~~l~~~~~~~Gi~~~r-------v~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~ 469 (619)
..+.+.+++.+++.|++ ++ |.|.|.++ .++...+|+.+|+++.|+.+ ++|++++|||++|+|||+....
T Consensus 229 ~~~l~~~~~~~~~~~~l~-~~v~~l~~vv~~~g~~~-~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~ 306 (413)
T 3oy2_A 229 KFDLHSIALRELVASGVD-NVFTHLNKIMINRTVLT-DERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG 306 (413)
T ss_dssp SCCHHHHHHHHHHHHTCS-CHHHHHTTEEEECSCCC-HHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH
T ss_pred hhhHHHHHHHHHHHcCcc-cccccccceeeccCcCC-HHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC
Confidence 12568889999999998 87 88889988 68999999999999999977 7799999999999999985432
Q ss_pred ccccchhHHHHHhc------------------CCCcccc-CCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChH
Q 007075 470 VHAHNVGVSLLTKV------------------GLKHLIA-KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQ 530 (619)
Q Consensus 470 ~~~~r~~~~~l~~~------------------gl~~~v~-~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~ 530 (619)
|..-+..- |+.+++. .|++++++.. +++.|++.++++++..++... ..|+++
T Consensus 307 ------g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~--~~fs~~ 377 (413)
T 3oy2_A 307 ------GADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVK--TKPTWD 377 (413)
T ss_dssp ------HHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHT--TSCCHH
T ss_pred ------ChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHH--HhCCHH
Confidence 21112111 2222343 6999999999 999999999999999988754 359999
Q ss_pred HHHHHHHHHHHHHHHH
Q 007075 531 NFALGLESTYRNMWHR 546 (619)
Q Consensus 531 ~~~~~le~~y~~~~~~ 546 (619)
.++++++++|+++.++
T Consensus 378 ~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 378 DISSDIIDFFNSLLRV 393 (413)
T ss_dssp HHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998754
No 12
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.77 E-value=2.9e-18 Score=181.25 Aligned_cols=338 Identities=13% Similarity=0.084 Sum_probs=217.2
Q ss_pred CccccccCCCCc--cChHHHhhHhHhhhhcCCceEEEEEecCcCCChhhHHHHHHHhhhCCeEEEcccC-------CHHH
Q 007075 185 PLVIGYVSPDYF--THSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGI-------DEKK 255 (619)
Q Consensus 185 ~LrIgyvs~~~~--~h~v~~~~~~~l~~~d~~~fev~~ys~~~~~D~~t~~~r~~~~~~~~~~~~~~~~-------~~~~ 255 (619)
+.+|.+++..+. ...+......+...+ ...++.+++....... ...+.. ..+-....+... ....
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 77 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEE-AHAYDK---TLDYEVIRWPRSVMLPTPTTAHA 77 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHH-HHHHHT---TCSSEEEEESSSSCCSCHHHHHH
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccc-hhhhcc---ccceEEEEccccccccchhhHHH
Confidence 467888887655 455666666666666 3556666665432211 111211 112222332221 1357
Q ss_pred HHHHhHhCCccEEEeCCCCCCCCcchhhcc-CCcc-eeEecccCCCCCC------------CCCccEEEecCCCCCCCcc
Q 007075 256 VAAMVREDKIDILVELTGHTANNKLGMMAC-QPAP-VQVTWIGYPNTTG------------LPTIDYRITDSLADPPETK 321 (619)
Q Consensus 256 ~~~~i~~d~~Dilvdl~g~t~~~r~~~~a~-r~Ap-vq~~~~G~p~ttg------------~~~~Dy~i~d~~~~p~~~~ 321 (619)
+.+.|++.++||++.-..... ..+..++. ...| +-.++.|+..... +...|.+++-.-..-....
T Consensus 78 l~~~~~~~~~Dvv~~~~~~~~-~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 156 (394)
T 3okp_A 78 MAEIIREREIDNVWFGAAAPL-ALMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFK 156 (394)
T ss_dssp HHHHHHHTTCSEEEESSCTTG-GGGHHHHHHTTCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCcchH-HHHHHHHHhcCCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHH
Confidence 899999999999974322111 12222221 2233 4445555321000 1335666652200000001
Q ss_pred CC--CccceEEcCCCccc--cCCCCCC--CCCCCCCCCCCCCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEec
Q 007075 322 QK--HVEELIRLPECFLC--YTPSPEA--GPVCPTPALTNGFITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVKC 393 (619)
Q Consensus 322 ~~--~~E~l~~lp~~~~~--~~p~~~~--~~~~~~~~l~~~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~g 393 (619)
.. ..+++..+|++... |.|.... ...+...+++++.++|+.++++ .|..+.+++++..+.++.|+.+|+++|
T Consensus 157 ~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G 236 (394)
T 3okp_A 157 SAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVG 236 (394)
T ss_dssp HHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred HhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEc
Confidence 11 24688888874321 1110000 0011223566777789999988 799999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCC--------CCchhHHHhhhcCCcEEe
Q 007075 394 KPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY--------AGTTTTCESLYMGVPCVT 465 (619)
Q Consensus 394 ~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~--------~g~~t~~eAl~~GvPvVt 465 (619)
.+ +..+.+++.+ .|+. ++|+|.|.++ .++...+|+.+|++|.|+.+ ++|++++|||++|+|||+
T Consensus 237 ~g----~~~~~l~~~~--~~~~-~~v~~~g~~~-~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~ 308 (394)
T 3okp_A 237 SG----RYESTLRRLA--TDVS-QNVKFLGRLE-YQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIA 308 (394)
T ss_dssp CC----TTHHHHHHHT--GGGG-GGEEEEESCC-HHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEE
T ss_pred Cc----hHHHHHHHHH--hccc-CeEEEcCCCC-HHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEE
Confidence 76 4556666666 6776 8999999987 68999999999999999975 668999999999999998
Q ss_pred ccCCccccchhHHHHHhcCCCccccC--CHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Q 007075 466 MAGSVHAHNVGVSLLTKVGLKHLIAK--NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543 (619)
Q Consensus 466 ~~g~~~~~r~~~~~l~~~gl~~~v~~--~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~ 543 (619)
........ +..-| .+++.. |++++++.+.+++.|++.++++++..++.... .|+++.++++++++|+++
T Consensus 309 ~~~~~~~e------~i~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 309 GTSGGAPE------TVTPA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEA--EWSWEIMGERLTNILQSE 379 (394)
T ss_dssp CSSTTGGG------GCCTT-TEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH--HTBHHHHHHHHHHHHHSC
T ss_pred eCCCChHH------HHhcC-CceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHh
Confidence 65432222 11224 555554 99999999999999999999999999887654 389999999999999987
Q ss_pred HHH
Q 007075 544 WHR 546 (619)
Q Consensus 544 ~~~ 546 (619)
.+.
T Consensus 380 ~r~ 382 (394)
T 3okp_A 380 PRK 382 (394)
T ss_dssp CC-
T ss_pred ccC
Confidence 543
No 13
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.76 E-value=8.7e-18 Score=177.50 Aligned_cols=159 Identities=11% Similarity=0.077 Sum_probs=145.4
Q ss_pred CHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 007075 1 MYNLGVAYGEMLK-FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79 (619)
Q Consensus 1 ~~~lg~~~~~~g~-~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 79 (619)
|+++|.++...|+ +++|+.+|+++++++|++..+|+++|.++..+|++++|+.+|+++++++|++..+|+++|.++..+
T Consensus 134 ~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~ 213 (382)
T 2h6f_A 134 WHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEF 213 (382)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHc
Confidence 4789999999997 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHH-----HHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC--C
Q 007075 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-AGSISLA-----IDAYEQCLKIDPDSRNAGQNRLLAMNYINEG--H 151 (619)
Q Consensus 80 g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~-~g~~~eA-----~~~~~~al~~~P~~~~a~~~~~la~~~~~~g--~ 151 (619)
|++++|+.+|+++++++|++..+|+++|.++.. .|..++| +.+|+++++++|++..++.+ ++.++...| +
T Consensus 214 g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~~~--l~~ll~~~g~~~ 291 (382)
T 2h6f_A 214 KLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNY--LKGILQDRGLSK 291 (382)
T ss_dssp TCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHHH--HHHHHTTTCGGG
T ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHHHH--HHHHHHccCccc
Confidence 999999999999999999999999999999999 5665888 59999999999999999988 555556666 5
Q ss_pred cHHHHHHHHH
Q 007075 152 DDKLFEAHRD 161 (619)
Q Consensus 152 ~~~a~~~~~~ 161 (619)
++++.+.+++
T Consensus 292 ~~~a~~~~~~ 301 (382)
T 2h6f_A 292 YPNLLNQLLD 301 (382)
T ss_dssp CHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 6776655443
No 14
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.75 E-value=1.5e-17 Score=147.08 Aligned_cols=118 Identities=20% Similarity=0.244 Sum_probs=111.3
Q ss_pred HHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 007075 23 LAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA 102 (619)
Q Consensus 23 ~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a 102 (619)
++..++|+.++++.++|..++..|++++|+++|+++++++|+++.++.++|.++..+|++++|+..++++++++|+++.+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 007075 103 YNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140 (619)
Q Consensus 103 ~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~ 140 (619)
++++|.++..+|++++|+..|+++++++|++..++.++
T Consensus 84 ~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l 121 (126)
T 4gco_A 84 YIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGV 121 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHH
Confidence 99999999999999999999999999999999887763
No 15
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.75 E-value=8.7e-17 Score=149.28 Aligned_cols=163 Identities=20% Similarity=0.349 Sum_probs=154.2
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+..|+++++.+|.+..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 90 (186)
T 3as5_A 11 YRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQ 90 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~ 160 (619)
++++|+.+++++++.+|++..++..+|.++...|++++|+.+++++++..|++..++.. ++..+...|+++++.+.++
T Consensus 91 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~--la~~~~~~~~~~~A~~~~~ 168 (186)
T 3as5_A 91 KYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRA--IAFSYEQMGRHEEALPHFK 168 (186)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHH--HHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999877766 7888899999999988887
Q ss_pred HHHHH
Q 007075 161 DWGKR 165 (619)
Q Consensus 161 ~~~~~ 165 (619)
+..+.
T Consensus 169 ~~~~~ 173 (186)
T 3as5_A 169 KANEL 173 (186)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 76554
No 16
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.74 E-value=2.4e-16 Score=153.67 Aligned_cols=161 Identities=19% Similarity=0.268 Sum_probs=117.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+.+|.++...|++++|+.+|+++++.+|.+..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|+
T Consensus 61 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 140 (243)
T 2q7f_A 61 INFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQ 140 (243)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcc
Confidence 45677777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~ 161 (619)
+++|+.+++++++..|++..++..+|.++...|++++|+..++++++.+|++..++.. ++..|...|+.+++.+.+++
T Consensus 141 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~--la~~~~~~~~~~~A~~~~~~ 218 (243)
T 2q7f_A 141 PKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYN--AGVTYAYKENREKALEMLDK 218 (243)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHH--HHHHHHHccCHHHHHHHHHH
Confidence 7777777777777777777777777777777777777777777777777776665544 66666777777777666655
Q ss_pred HHH
Q 007075 162 WGK 164 (619)
Q Consensus 162 ~~~ 164 (619)
..+
T Consensus 219 ~~~ 221 (243)
T 2q7f_A 219 AID 221 (243)
T ss_dssp HHH
T ss_pred HHc
Confidence 433
No 17
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.73 E-value=9.7e-17 Score=150.47 Aligned_cols=134 Identities=25% Similarity=0.376 Sum_probs=130.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++++|.++...|++++|+..+++++...|++..++..+|.++...+++++|.+.++++++++|++..++..+|.++..+|
T Consensus 42 ~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g 121 (184)
T 3vtx_A 42 LLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMG 121 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~ 134 (619)
++++|+..|+++++++|+++.+++++|.+|..+|++++|+.+|+++++++|+++
T Consensus 122 ~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 122 EHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred CchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCH
Confidence 999999999999999999999999999999999999999999999999999753
No 18
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.73 E-value=3.4e-17 Score=178.39 Aligned_cols=161 Identities=22% Similarity=0.241 Sum_probs=152.0
Q ss_pred CHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 007075 1 MYNLGVAYGEMLKF-DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79 (619)
Q Consensus 1 ~~~lg~~~~~~g~~-~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 79 (619)
++.+|.++...|++ ++|+.+|+++++++|++..+++++|.+|...|++++|+++|+++++++|+ ..++.++|.++...
T Consensus 105 ~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~~ 183 (474)
T 4abn_A 105 LMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQL 183 (474)
T ss_dssp HHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHh
Confidence 46789999999999 99999999999999999999999999999999999999999999999999 79999999999999
Q ss_pred ---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHhCC---CCHHHHHH
Q 007075 80 ---------GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA--------GSISLAIDAYEQCLKIDP---DSRNAGQN 139 (619)
Q Consensus 80 ---------g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~--------g~~~eA~~~~~~al~~~P---~~~~a~~~ 139 (619)
|++++|+.+|+++++++|++..+|+++|.+|..+ |++++|+.+|+++++++| ++..++.+
T Consensus 184 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 263 (474)
T 4abn_A 184 QTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLN 263 (474)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHH
T ss_pred ccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999999 88888887
Q ss_pred HHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 140 RLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 140 ~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
++..|...|++++|.+.+++..+
T Consensus 264 --lg~~~~~~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 264 --RATLHKYEESYGEALEGFSQAAA 286 (474)
T ss_dssp --HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --HHHHHHHcCCHHHHHHHHHHHHH
Confidence 78888999999999888776544
No 19
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.73 E-value=2.3e-16 Score=164.61 Aligned_cols=160 Identities=22% Similarity=0.312 Sum_probs=83.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC------------------
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP------------------ 63 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p------------------ 63 (619)
+.+|.++...|++++|+.+|+++++.+|++..++.++|.+|...|++++|+++|+++++++|
T Consensus 103 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~ 182 (365)
T 4eqf_A 103 QFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRR 182 (365)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHH
Confidence 34455555555555555555555555555555555555555555555544444444443322
Q ss_pred --------------------------C--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 007075 64 --------------------------N--FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115 (619)
Q Consensus 64 --------------------------~--~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~ 115 (619)
+ ++.++.++|.++...|++++|+.+|+++++.+|+++.++.++|.+|..+|+
T Consensus 183 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 262 (365)
T 4eqf_A 183 MSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDR 262 (365)
T ss_dssp ------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 2 444455555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 007075 116 ISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWG 163 (619)
Q Consensus 116 ~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~ 163 (619)
+++|+.+|+++++++|++..++.+ ++.+|...|+++++.+.+++..
T Consensus 263 ~~~A~~~~~~al~~~p~~~~~~~~--l~~~~~~~g~~~~A~~~~~~al 308 (365)
T 4eqf_A 263 SEEAVEAYTRALEIQPGFIRSRYN--LGISCINLGAYREAVSNFLTAL 308 (365)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchHHHHH--HHHHHHHCCCHHHHHHHHHHHH
Confidence 555555555555555555444444 4445555555555555544443
No 20
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.73 E-value=3.3e-16 Score=150.47 Aligned_cols=163 Identities=25% Similarity=0.220 Sum_probs=152.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ- 79 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~- 79 (619)
++.+|..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+++++++++.+|++..++..+|.++...
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 90 (225)
T 2vq2_A 11 KTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRL 90 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhc
Confidence 3678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHH
Q 007075 80 GKMDAAAEMIEKAIA--ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFE 157 (619)
Q Consensus 80 g~~~eA~~~~~~al~--~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~ 157 (619)
|++++|+.+++++++ ..|....++.++|.++...|++++|+.+++++++..|++..++.. ++..+...|+++++.+
T Consensus 91 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~--la~~~~~~~~~~~A~~ 168 (225)
T 2vq2_A 91 NRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKE--LARTKMLAGQLGDADY 168 (225)
T ss_dssp CCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH--HHHHHHHHTCHHHHHH
T ss_pred CcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHH--HHHHHHHcCCHHHHHH
Confidence 999999999999999 677778999999999999999999999999999999999887766 7888899999999988
Q ss_pred HHHHHHHH
Q 007075 158 AHRDWGKR 165 (619)
Q Consensus 158 ~~~~~~~~ 165 (619)
.+++..+.
T Consensus 169 ~~~~~~~~ 176 (225)
T 2vq2_A 169 YFKKYQSR 176 (225)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88776543
No 21
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.73 E-value=5.8e-18 Score=154.75 Aligned_cols=126 Identities=9% Similarity=0.061 Sum_probs=117.4
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 007075 9 GEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEM 88 (619)
Q Consensus 9 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~ 88 (619)
...+++-.+-..++++++++|++..+++++|.++...|++++|+.+|+++++++|+++.+|.++|.++..+|++++|+.+
T Consensus 13 ~~l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~ 92 (151)
T 3gyz_A 13 TAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADL 92 (151)
T ss_dssp HHHHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHH
Confidence 33444555556677888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 007075 89 IEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134 (619)
Q Consensus 89 ~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~ 134 (619)
|+++++++|+++.+++++|.+|..+|++++|+.+|++++++.|+..
T Consensus 93 ~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 93 YAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999999999864
No 22
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.73 E-value=6.4e-18 Score=179.27 Aligned_cols=278 Identities=16% Similarity=0.143 Sum_probs=183.6
Q ss_pred HHHHHHhHhCCccEEEeCCCCCCCCcchhhccC----CcceeEecccCC----CCCC---------CCCccEEEecCCCC
Q 007075 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQ----PAPVQVTWIGYP----NTTG---------LPTIDYRITDSLAD 316 (619)
Q Consensus 254 ~~~~~~i~~d~~Dilvdl~g~t~~~r~~~~a~r----~Apvq~~~~G~p----~ttg---------~~~~Dy~i~d~~~~ 316 (619)
..+.+.|++.++||++....+.. .....++.+ -.|+-++..|.. .... +...|.+++-.-..
T Consensus 89 ~~l~~~l~~~~~Dvv~~~~~~~~-~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~ 167 (394)
T 2jjm_A 89 SKMAEVAQRENLDILHVHYAIPH-AICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSL 167 (394)
T ss_dssp HHHHHHHHHHTCSEEEECSSTTH-HHHHHHHHHHTTTCSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHH
T ss_pred HHHHHHHHHcCCCEEEEcchhHH-HHHHHHHHHhhcCCCCEEEEEecCcccccCCCHHHHHHHHHHHhhCCEEEECCHHH
Confidence 35778899999999976433321 112223322 367766655521 1111 12346666522000
Q ss_pred CCCccCCC--ccceEEcCCCccc--cCCCCCCCCCCCCCCCCCCCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEE
Q 007075 317 PPETKQKH--VEELIRLPECFLC--YTPSPEAGPVCPTPALTNGFITFGSFNNL--AKITPKVLQVWARILCAVPNSRLV 390 (619)
Q Consensus 317 p~~~~~~~--~E~l~~lp~~~~~--~~p~~~~~~~~~~~~l~~~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~ 390 (619)
-......+ .+++..+|++... |.|.. ....+...+++++.+++++++++ .|..+.++++|..+.++ ++.+|+
T Consensus 168 ~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~ 245 (394)
T 2jjm_A 168 INETHELVKPNKDIQTVYNFIDERVYFKRD-MTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLL 245 (394)
T ss_dssp HHHHHHHTCCSSCEEECCCCCCTTTCCCCC-CHHHHHHTTCC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEE
T ss_pred HHHHHHhhCCcccEEEecCCccHHhcCCcc-hHHHHHHcCCCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEE
Confidence 00001111 4688888875321 11110 00011123454666788899987 69999999999998776 679999
Q ss_pred EeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCC
Q 007075 391 VKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGS 469 (619)
Q Consensus 391 l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~ 469 (619)
++|.+ +..+.+++.++++|+. ++|.|.|. ..+...+|+.+|+++.|+.+ ++|++++|||++|+|||+....
T Consensus 246 i~G~g----~~~~~l~~~~~~~~l~-~~v~~~g~---~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~ 317 (394)
T 2jjm_A 246 LVGDG----PEFCTILQLVKNLHIE-DRVLFLGK---QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVG 317 (394)
T ss_dssp EECCC----TTHHHHHHHHHTTTCG-GGBCCCBS---CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCT
T ss_pred EECCc----hHHHHHHHHHHHcCCC-CeEEEeCc---hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCC
Confidence 99976 4568889999999998 89999997 45788899999999999976 7799999999999999986543
Q ss_pred ccccchhHHHHHhcCCCcccc--CCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHH
Q 007075 470 VHAHNVGVSLLTKVGLKHLIA--KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547 (619)
Q Consensus 470 ~~~~r~~~~~l~~~gl~~~v~--~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~~~ 547 (619)
....- + .-|..+++. .|.+++++.+.+++.|++.++++++..++.... .|+++.++++++++|+++..+.
T Consensus 318 ~~~e~-----v-~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 318 GIPEV-----I-QHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYE--QFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp TSTTT-----C-CBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH--HSCHHHHHHHHHHHHHHTC---
T ss_pred ChHHH-----h-hcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHhhh
Confidence 22111 1 113344454 389999999999999999999999998887643 3999999999999999988765
Q ss_pred hcC
Q 007075 548 CKG 550 (619)
Q Consensus 548 ~~g 550 (619)
..|
T Consensus 390 ~~~ 392 (394)
T 2jjm_A 390 KNG 392 (394)
T ss_dssp ---
T ss_pred hcc
Confidence 443
No 23
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.73 E-value=4.2e-17 Score=173.13 Aligned_cols=331 Identities=13% Similarity=0.090 Sum_probs=214.1
Q ss_pred CCCCccccccCCCCcc--ChHHHhhHhHhhhhcCCceEEEEEecCcCCChhh---------HHHHHHHhhhCCeEEEccc
Q 007075 182 PERPLVIGYVSPDYFT--HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKT---------IRFREKVMKKGGIWRDIYG 250 (619)
Q Consensus 182 ~~~~LrIgyvs~~~~~--h~v~~~~~~~l~~~d~~~fev~~ys~~~~~D~~t---------~~~r~~~~~~~~~~~~~~~ 250 (619)
...+.+|.+++..+.. ..+......+...+....+++.+++......... ..+... ..+.. ..
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~ 90 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYN-----GSVAR-LR 90 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEecccc-----CCccc-cc
Confidence 3466789998865432 4455555555555555578888877654322000 000000 00000 11
Q ss_pred CC---HHHHHHHhHhCCccEEEeCCCCCCCCcchhhccC--CcceeEecccCCCCC------------CCCCccEEEecC
Q 007075 251 ID---EKKVAAMVREDKIDILVELTGHTANNKLGMMACQ--PAPVQVTWIGYPNTT------------GLPTIDYRITDS 313 (619)
Q Consensus 251 ~~---~~~~~~~i~~d~~Dilvdl~g~t~~~r~~~~a~r--~Apvq~~~~G~p~tt------------g~~~~Dy~i~d~ 313 (619)
.. ...+.+.|++.++||++........ +..++.+ ..|+-+...+..... .+...|.+++-.
T Consensus 91 ~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~--~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 168 (406)
T 2gek_A 91 FGPATHRKVKKWIAEGDFDVLHIHEPNAPS--LSMLALQAAEGPIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVS 168 (406)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCCSSS--HHHHHHHHEESSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESS
T ss_pred ccHHHHHHHHHHHHhcCCCEEEECCccchH--HHHHHHHhcCCCEEEEEcCcchhhhhHHHHHHHHHHHHhhCCEEEECC
Confidence 12 2568888999999999875544432 1222222 356666555532221 125567776532
Q ss_pred CCCCCCccCCC-ccceEEcCCCccc--cCCCCCCCCCCCCCCCCCCCeEEEecCCC---CcCCHHHHHHHHHHHHHCCCc
Q 007075 314 LADPPETKQKH-VEELIRLPECFLC--YTPSPEAGPVCPTPALTNGFITFGSFNNL---AKITPKVLQVWARILCAVPNS 387 (619)
Q Consensus 314 ~~~p~~~~~~~-~E~l~~lp~~~~~--~~p~~~~~~~~~~~~l~~~~~~f~~~~~~---~K~~~~~~~~~~~il~~~P~a 387 (619)
-..-......+ .+++ .+|++... |.+.. ....++++.+++++++++ .|..+.+++++.++.++.|+.
T Consensus 169 ~~~~~~~~~~~~~~~~-vi~~~v~~~~~~~~~------~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~ 241 (406)
T 2gek_A 169 DLARRWQMEALGSDAV-EIPNGVDVASFADAP------LLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDV 241 (406)
T ss_dssp HHHHHHHHHHHSSCEE-ECCCCBCHHHHHTCC------CCTTCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTC
T ss_pred HHHHHHHHHhcCCCcE-EecCCCChhhcCCCc------hhhhccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCe
Confidence 00000001112 3566 88875321 22221 112233355678888888 699999999999999999999
Q ss_pred eEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCC-C-CCchhHHHhhhcCCcEEe
Q 007075 388 RLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFP-Y-AGTTTTCESLYMGVPCVT 465 (619)
Q Consensus 388 ~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~-~-~g~~t~~eAl~~GvPvVt 465 (619)
+|+++|.+ +. +.+++.++++ .++|.|.|.++ ..+...+|+.+|++|.|+. + +.|++++|||++|+|||+
T Consensus 242 ~l~i~G~~----~~-~~l~~~~~~~---~~~v~~~g~~~-~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~ 312 (406)
T 2gek_A 242 EILIVGRG----DE-DELREQAGDL---AGHLRFLGQVD-DATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVA 312 (406)
T ss_dssp EEEEESCS----CH-HHHHHHTGGG---GGGEEECCSCC-HHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEE
T ss_pred EEEEEcCC----cH-HHHHHHHHhc---cCcEEEEecCC-HHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEE
Confidence 99999976 33 6777777666 48999999998 5788999999999999973 4 779999999999999998
Q ss_pred ccCCccccchhHHHHHhcCCCcccc--CCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Q 007075 466 MAGSVHAHNVGVSLLTKVGLKHLIA--KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543 (619)
Q Consensus 466 ~~g~~~~~r~~~~~l~~~gl~~~v~--~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~ 543 (619)
.... +..-+..-|..+++. .|.+++++.+.+++.|++.++++++..++... .|+++.+++.++++|+++
T Consensus 313 ~~~~------~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~---~~s~~~~~~~~~~~~~~~ 383 (406)
T 2gek_A 313 SDLD------AFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVH---RYDWSVVSAQIMRVYETV 383 (406)
T ss_dssp CCCH------HHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG---GGBHHHHHHHHHHHHHHH
T ss_pred ecCC------cHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHHHH
Confidence 5532 222222335556665 79999999999999999999999999888654 499999999999999988
Q ss_pred HH
Q 007075 544 WH 545 (619)
Q Consensus 544 ~~ 545 (619)
+.
T Consensus 384 ~~ 385 (406)
T 2gek_A 384 SG 385 (406)
T ss_dssp CC
T ss_pred Hh
Confidence 64
No 24
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.72 E-value=2e-16 Score=155.47 Aligned_cols=164 Identities=20% Similarity=0.196 Sum_probs=152.3
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh-------------
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHC-------AEACNNLGVIYKDRDNLDKAVECYQMALS------------- 60 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-------~~a~~~la~~~~~~g~~~~A~~~~~~al~------------- 60 (619)
++.+|.++...|++++|+.+|+++++.+|++ ..++..+|.++...|++++|+++|+++++
T Consensus 41 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 120 (258)
T 3uq3_A 41 LNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRN 120 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhH
Confidence 3678999999999999999999999998876 79999999999999999999999999999
Q ss_pred -------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 007075 61 -------------IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCL 127 (619)
Q Consensus 61 -------------l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al 127 (619)
.+|.+..++..+|.++...|++++|+.+++++++.+|+++.++.++|.++...|++++|+.+|++++
T Consensus 121 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 200 (258)
T 3uq3_A 121 AEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAI 200 (258)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 6677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 128 KIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 128 ~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
+.+|++..++.. ++..+...|+.+++.+.+++..+..
T Consensus 201 ~~~~~~~~~~~~--l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 201 EKDPNFVRAYIR--KATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHH--HHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 999999888776 7888999999999988887766553
No 25
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.72 E-value=8.6e-17 Score=142.16 Aligned_cols=109 Identities=16% Similarity=0.188 Sum_probs=106.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
.++|..+++.|+|++|+.+|+++++++|.++.+++++|.++..+|++++|++.|+++++++|++..+++++|.++..+|+
T Consensus 17 ~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 96 (126)
T 4gco_A 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMRE 96 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLY 110 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~ 110 (619)
+++|+..|+++++++|++.+++.+|+.++
T Consensus 97 ~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 97 WSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999999999999999875
No 26
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.72 E-value=2e-16 Score=154.34 Aligned_cols=162 Identities=19% Similarity=0.225 Sum_probs=139.3
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|
T Consensus 26 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 105 (243)
T 2q7f_A 26 GGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKE 105 (243)
T ss_dssp ----------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~ 160 (619)
++++|+..++++++.+|++..++..+|.++...|++++|+..++++++..|++..++.. ++..+...|+++++...++
T Consensus 106 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~A~~~~~ 183 (243)
T 2q7f_A 106 MYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQ--FGMCLANEGMLDEALSQFA 183 (243)
T ss_dssp CHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHHTCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHH--HHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887766 7888899999999988877
Q ss_pred HHHH
Q 007075 161 DWGK 164 (619)
Q Consensus 161 ~~~~ 164 (619)
+..+
T Consensus 184 ~~~~ 187 (243)
T 2q7f_A 184 AVTE 187 (243)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 27
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.72 E-value=3.7e-16 Score=162.93 Aligned_cols=162 Identities=26% Similarity=0.356 Sum_probs=146.4
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|+++++.+|++..+++++|.++...|++++|+++|+++++++|++..++.++|.++...|
T Consensus 68 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 147 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTS 147 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccc
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCC----------------------------------------------CHHHHHHHHHHHHHcC
Q 007075 81 KMDAAAEMIEKAIAANPT----------------------------------------------YAEAYNNLGVLYRDAG 114 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~----------------------------------------------~~~a~~~Lg~~~~~~g 114 (619)
++++|+.+|+++++++|+ ++.++.++|.++..+|
T Consensus 148 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g 227 (365)
T 4eqf_A 148 HQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSG 227 (365)
T ss_dssp CHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCC
Confidence 999998888888776553 6788889999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 115 ~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
++++|+..|+++++++|++..++.+ ++..+...|+++++.+.+++..+
T Consensus 228 ~~~~A~~~~~~al~~~p~~~~~~~~--l~~~~~~~g~~~~A~~~~~~al~ 275 (365)
T 4eqf_A 228 EFNRAIDAFNAALTVRPEDYSLWNR--LGATLANGDRSEEAVEAYTRALE 275 (365)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHcCCHHHHHHHHHHHHh
Confidence 9999999999999999998887766 77788888998888887776544
No 28
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.72 E-value=1.4e-16 Score=158.69 Aligned_cols=163 Identities=18% Similarity=0.161 Sum_probs=143.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHC---AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF---SQSLNNLGV 74 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~---~~~~~~lg~ 74 (619)
++.+|..++..|++++|+..|+++++.+|++ ..+++.+|.++...|++++|+..|++++++.|++ ..+++.+|.
T Consensus 18 ~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~ 97 (261)
T 3qky_A 18 AFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAM 97 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHH
Confidence 3789999999999999999999999999999 9999999999999999999999999999998854 678999999
Q ss_pred HHHH--------cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 75 VYTV--------QGKMDAAAEMIEKAIAANPTYAEAY-----------------NNLGVLYRDAGSISLAIDAYEQCLKI 129 (619)
Q Consensus 75 ~~~~--------~g~~~eA~~~~~~al~~~p~~~~a~-----------------~~Lg~~~~~~g~~~eA~~~~~~al~~ 129 (619)
++.. .|++++|+..|+++++.+|++..+. +.+|.+|...|++++|+..|+++++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 177 (261)
T 3qky_A 98 CYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDA 177 (261)
T ss_dssp HHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 9999 9999999999999999999986655 88999999999999999999999999
Q ss_pred CCCCH---HHHHHHHHHHHHhhc----------CCcHHHHHHHHHHHHH
Q 007075 130 DPDSR---NAGQNRLLAMNYINE----------GHDDKLFEAHRDWGKR 165 (619)
Q Consensus 130 ~P~~~---~a~~~~~la~~~~~~----------g~~~~a~~~~~~~~~~ 165 (619)
.|++. .++.. ++.+|... |+++++...+++..+.
T Consensus 178 ~p~~~~~~~a~~~--l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~ 224 (261)
T 3qky_A 178 YPDTPWADDALVG--AMRAYIAYAEQSVRARQPERYRRAVELYERLLQI 224 (261)
T ss_dssp CTTSTTHHHHHHH--HHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHH--HHHHHHHhcccchhhcccchHHHHHHHHHHHHHH
Confidence 99854 45544 66666655 6667777776665443
No 29
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.72 E-value=3.3e-16 Score=154.16 Aligned_cols=160 Identities=20% Similarity=0.230 Sum_probs=149.4
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|.++...|++++|+.+|+++++.+|.+..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|
T Consensus 40 ~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g 119 (252)
T 2ho1_A 40 YIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQK 119 (252)
T ss_dssp HHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHH
Q 007075 81 KMDAAAEMIEKAIA--ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA 158 (619)
Q Consensus 81 ~~~eA~~~~~~al~--~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~ 158 (619)
++++|+.+++++++ ..|.+..++..+|.++...|++++|+.+|+++++.+|++..++.. ++..+...|+++++.+.
T Consensus 120 ~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~--la~~~~~~g~~~~A~~~ 197 (252)
T 2ho1_A 120 RYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALE--MADLLYKEREYVPARQY 197 (252)
T ss_dssp CHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHH--HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHH--HHHHHHHcCCHHHHHHH
Confidence 99999999999999 888899999999999999999999999999999999998877665 78888999999988887
Q ss_pred HHHH
Q 007075 159 HRDW 162 (619)
Q Consensus 159 ~~~~ 162 (619)
+++.
T Consensus 198 ~~~~ 201 (252)
T 2ho1_A 198 YDLF 201 (252)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 30
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.71 E-value=3e-16 Score=165.19 Aligned_cols=159 Identities=31% Similarity=0.454 Sum_probs=128.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+++|.++...|++++|+..|+++++.+|++..++.++|.++...|++++|+..|+++++++|++..++.++|.++...|+
T Consensus 173 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 252 (388)
T 1w3b_A 173 SNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGL 252 (388)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCC
Confidence 56788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~ 161 (619)
+++|+..|+++++.+|+++.++.++|.++...|++++|+..|+++++++|++..++.+ ++..+...|+.+++.+.+++
T Consensus 253 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~--l~~~~~~~g~~~~A~~~~~~ 330 (388)
T 1w3b_A 253 IDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNN--LANIKREQGNIEEAVRLYRK 330 (388)
T ss_dssp HHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHH--HHHHHHHcCCHHHHHHHHHH
Confidence 8888888888888888888888888888888888888888888888888887777665 66677777777777766655
Q ss_pred H
Q 007075 162 W 162 (619)
Q Consensus 162 ~ 162 (619)
.
T Consensus 331 a 331 (388)
T 1w3b_A 331 A 331 (388)
T ss_dssp H
T ss_pred H
Confidence 4
No 31
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.71 E-value=4e-16 Score=162.04 Aligned_cols=288 Identities=10% Similarity=0.036 Sum_probs=183.6
Q ss_pred ChHHHhhHhHhhhhcCCceEEEEEecCcCCChhhHHHHHHHhhhCCeEEEcccCCHHHHHHHhHhCCccEEEeCCCCCCC
Q 007075 198 HSVSYFIEAPLVYHDYQNYKVVVYSAVVKADAKTIRFREKVMKKGGIWRDIYGIDEKKVAAMVREDKIDILVELTGHTAN 277 (619)
Q Consensus 198 h~v~~~~~~~l~~~d~~~fev~~ys~~~~~D~~t~~~r~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~Dilvdl~g~t~~ 277 (619)
..+..+...+...+....+++.+++........ +....+.......+.+.|++.++||++....+...
T Consensus 30 gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~------------~~~~~~~~~~~~~l~~~l~~~~~Dvi~~~~~~~~~ 97 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR------------PGLTVVPAGEPEEIERWLRTADVDVVHDHSGGVIG 97 (342)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS------------TTEEECSCCSHHHHHHHHHHCCCSEEEECSSSSSC
T ss_pred ChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC------------CcceeccCCcHHHHHHHHHhcCCCEEEECCchhhH
Confidence 445555555655665567888888765433210 01112222234588999999999999865443321
Q ss_pred CcchhhccCCcceeEecccCCCCCCCCCccEEEecCCCCCCCc-cCCC--ccceEEcCCCccc--cCCCCCCCCCCCCCC
Q 007075 278 NKLGMMACQPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPET-KQKH--VEELIRLPECFLC--YTPSPEAGPVCPTPA 352 (619)
Q Consensus 278 ~r~~~~a~r~Apvq~~~~G~p~ttg~~~~Dy~i~d~~~~p~~~-~~~~--~E~l~~lp~~~~~--~~p~~~~~~~~~~~~ 352 (619)
+ .....-.| -++..+..... ...|.+++ +... ...+ .+++..+|++... |.|... .
T Consensus 98 --~-~~~~~~~p-v~~~h~~~~~~--~~~d~ii~-----~S~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~--------~ 158 (342)
T 2iuy_A 98 --P-AGLPPGTA-FISSHHFTTRP--VNPVGCTY-----SSRAQRAHCGGGDDAPVIPIPVDPARYRSAAD--------Q 158 (342)
T ss_dssp --S-TTCCTTCE-EEEEECSSSBC--SCCTTEEE-----SCHHHHHHTTCCTTSCBCCCCBCGGGSCCSTT--------C
T ss_pred --H-HHhhcCCC-EEEecCCCCCc--ccceEEEE-----cCHHHHHHHhcCCceEEEcCCCChhhcCcccc--------c
Confidence 1 11122335 33444432211 12455544 2221 1111 4677778874321 112110 1
Q ss_pred CCCCCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHH
Q 007075 353 LTNGFITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430 (619)
Q Consensus 353 l~~~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~ 430 (619)
.++ ..+|++++++ .|..+.+++++.++ +.+|+++|.+ +.++.+++..+++| ++|+|.|+++ ..+
T Consensus 159 ~~~-~~~i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G~g----~~~~~l~~~~~~~~---~~v~~~g~~~-~~~ 224 (342)
T 2iuy_A 159 VAK-EDFLLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAGPA----WEPEYFDEITRRYG---STVEPIGEVG-GER 224 (342)
T ss_dssp CCC-CSCEEEESCCCGGGTHHHHHHHHHHH-----TCCEEEESCC----CCHHHHHHHHHHHT---TTEEECCCCC-HHH
T ss_pred CCC-CCEEEEEeccccccCHHHHHHHHHhc-----CcEEEEEeCc----ccHHHHHHHHHHhC---CCEEEeccCC-HHH
Confidence 122 2357777877 69999999998876 7899999977 34567777777776 7999999998 578
Q ss_pred HHHhcccCcEeecCCC----------C-CCchhHHHhhhcCCcEEeccCCccccchhHHHHHhc--CCCccccC-CHHHH
Q 007075 431 HMQAYSLMDISLDTFP----------Y-AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV--GLKHLIAK-NEDEY 496 (619)
Q Consensus 431 ~~~~~~~~Dv~Ldt~~----------~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~--gl~~~v~~-~~~~y 496 (619)
...+|+.+|+++.|+. + ++|++++|||++|+|||+.... +..-+..- |..+++.+ |.+++
T Consensus 225 l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~------~~~e~~~~~~~~~g~~~~~d~~~l 298 (342)
T 2iuy_A 225 RLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG------CLAEIVPSVGEVVGYGTDFAPDEA 298 (342)
T ss_dssp HHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT------THHHHGGGGEEECCSSSCCCHHHH
T ss_pred HHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC------ChHHHhcccCCCceEEcCCCHHHH
Confidence 8999999999999988 4 7799999999999999986542 22222222 44556665 99999
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHH
Q 007075 497 VQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546 (619)
Q Consensus 497 ~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~~ 546 (619)
++.+.++.. ++..++... ..|+++.++++++++|++++++
T Consensus 299 ~~~i~~l~~--------~~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 299 RRTLAGLPA--------SDEVRRAAV--RLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp HHHHHTSCC--------HHHHHHHHH--HHHBHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH--------HHHHHHHHH--HhcCHHHHHHHHHHHHHHHHcc
Confidence 999999887 223333322 2389999999999999998753
No 32
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.71 E-value=9.2e-16 Score=150.88 Aligned_cols=163 Identities=17% Similarity=0.072 Sum_probs=152.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS--IKPNFSQSLNNLGVVYTV 78 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~--l~p~~~~~~~~lg~~~~~ 78 (619)
++.+|.++...|++++|+.+|+++++.+|.+..++..+|.++...|++++|+++++++++ ..|.+..++..+|.++..
T Consensus 74 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 153 (252)
T 2ho1_A 74 HAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ 153 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999 889999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHH
Q 007075 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEA 158 (619)
Q Consensus 79 ~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~ 158 (619)
.|++++|+.+++++++..|.+..++..+|.++..+|++++|+..++++++..|++..++.. ++..+...|+.+++.+.
T Consensus 154 ~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~A~~~ 231 (252)
T 2ho1_A 154 MKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLL--GIRLAKVFEDRDTAASY 231 (252)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHH--HHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHH--HHHHHHHccCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998877655 77888889999998887
Q ss_pred HHHHHHH
Q 007075 159 HRDWGKR 165 (619)
Q Consensus 159 ~~~~~~~ 165 (619)
+++..+.
T Consensus 232 ~~~~~~~ 238 (252)
T 2ho1_A 232 GLQLKRL 238 (252)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766543
No 33
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.71 E-value=3.7e-16 Score=164.58 Aligned_cols=161 Identities=25% Similarity=0.366 Sum_probs=153.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
.++|.++...|++++|+..|+++++.+|++..++.++|.++...|++++|++.|+++++++|++..++.++|.++...|+
T Consensus 139 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~ 218 (388)
T 1w3b_A 139 SDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARI 218 (388)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~ 161 (619)
+++|+..|+++++.+|++..++.++|.++...|++++|+..|+++++++|+++.++.+ ++..+...|+.+++.+.+++
T Consensus 219 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~--l~~~~~~~g~~~~A~~~~~~ 296 (388)
T 1w3b_A 219 FDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCN--LANALKEKGSVAEAEDCYNT 296 (388)
T ss_dssp TTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHH--HHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHH--HHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988776 78888999999999888776
Q ss_pred HHH
Q 007075 162 WGK 164 (619)
Q Consensus 162 ~~~ 164 (619)
..+
T Consensus 297 al~ 299 (388)
T 1w3b_A 297 ALR 299 (388)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 34
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.71 E-value=1.4e-16 Score=153.37 Aligned_cols=158 Identities=18% Similarity=0.124 Sum_probs=135.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH----------------HHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNN----------------LGVIYKDRDNLDKAVECYQMALSIKPNF 65 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~----------------la~~~~~~g~~~~A~~~~~~al~l~p~~ 65 (619)
+..|..+...|++++|+.+|+++++.+|+++.+++. +|.++...|++++|+..|+++++++|++
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 8 LQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 568999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 007075 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS--ISLAIDAYEQCLKIDPDSRNAGQNRLLA 143 (619)
Q Consensus 66 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~--~~eA~~~~~~al~~~P~~~~a~~~~~la 143 (619)
..++.++|.++...|++++|+.+|+++++++|+++.+++++|.+|...|+ .+++...|++++...|. ..++++ .+
T Consensus 88 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~--~g 164 (208)
T 3urz_A 88 VDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKM-QYARYR--DG 164 (208)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHH-HHHHHH--HH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCch-hHHHHH--HH
Confidence 99999999999999999999999999999999999999999999987764 45667777777643322 123333 56
Q ss_pred HHHhhcCCcHHHHHHHHHH
Q 007075 144 MNYINEGHDDKLFEAHRDW 162 (619)
Q Consensus 144 ~~~~~~g~~~~a~~~~~~~ 162 (619)
..+...|++++|...+++.
T Consensus 165 ~~~~~~~~~~~A~~~~~~a 183 (208)
T 3urz_A 165 LSKLFTTRYEKARNSLQKV 183 (208)
T ss_dssp HHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHH
Confidence 6667778888877776654
No 35
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.70 E-value=1.7e-16 Score=170.47 Aligned_cols=211 Identities=14% Similarity=0.130 Sum_probs=160.1
Q ss_pred ccceEEcCCCccc--cCCCCCCCC--CCCCCCCCCCCeEEEecCCC--CcCCHHHHHHHHHHHHHCC--CceEEEeccCC
Q 007075 325 VEELIRLPECFLC--YTPSPEAGP--VCPTPALTNGFITFGSFNNL--AKITPKVLQVWARILCAVP--NSRLVVKCKPF 396 (619)
Q Consensus 325 ~E~l~~lp~~~~~--~~p~~~~~~--~~~~~~l~~~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P--~a~l~l~g~~~ 396 (619)
.+++..+|++... |.|...... .+...+++++.++|++++++ .|..+.++++|..+.++.| +.+|+++|...
T Consensus 207 ~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~ 286 (438)
T 3c48_A 207 PDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS 286 (438)
T ss_dssp GGGEEECCCCCCTTTSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC
T ss_pred hhheEEecCCccccccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCC
Confidence 5778889875321 222110000 11123455677889999987 6999999999999999988 79999999732
Q ss_pred CCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCCccccch
Q 007075 397 CCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHNV 475 (619)
Q Consensus 397 ~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~ 475 (619)
..++..+.+++.++++|+. ++|+|+|.++ ..+...+|+.+|++|.|+.+ ++|++++|||++|+|||+....
T Consensus 287 ~~g~~~~~l~~~~~~~~l~-~~v~~~g~~~-~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~------ 358 (438)
T 3c48_A 287 GPNATPDTYRHMAEELGVE-KRIRFLDPRP-PSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG------ 358 (438)
T ss_dssp ------CHHHHHHHHTTCT-TTEEEECCCC-HHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCT------
T ss_pred CCCcHHHHHHHHHHHcCCC-CcEEEcCCCC-hHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCC------
Confidence 2236678899999999998 8999999987 68899999999999999976 7799999999999999986532
Q ss_pred hHHHHHhcCCCcccc--CCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHH
Q 007075 476 GVSLLTKVGLKHLIA--KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546 (619)
Q Consensus 476 ~~~~l~~~gl~~~v~--~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~~ 546 (619)
+..-+..-|..+++. .|++++++.+.+++.|++.+.++++..++.... |+++.++++++++|+++..+
T Consensus 359 ~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 359 GLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHART---FSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp THHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHT
T ss_pred ChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHhhh
Confidence 111122224445554 489999999999999999999999998887543 89999999999999999875
No 36
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.70 E-value=8.8e-17 Score=182.88 Aligned_cols=133 Identities=23% Similarity=0.381 Sum_probs=129.5
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
+++||.+|.++|++++|+.+|+++++++|+++.+++++|.++..+|++++|+++|+++++++|++..++.++|.+|..+|
T Consensus 46 ~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g 125 (723)
T 4gyw_A 46 HSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSG 125 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~ 133 (619)
++++|+++|+++++++|+++.++.+||.+|..+|++++|++.|++++++.|+.
T Consensus 126 ~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 126 NIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhH
Confidence 99999999999999999999999999999999999999999999999986653
No 37
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.70 E-value=2.7e-16 Score=152.95 Aligned_cols=139 Identities=21% Similarity=0.321 Sum_probs=132.7
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-------HHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS-------QSLNNLG 73 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~-------~~~~~lg 73 (619)
++++|.++...|++++|+.+|+++++.+|++..++.++|.++..+|++++|+++|+++++++|++. .++.++|
T Consensus 45 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g 124 (228)
T 4i17_A 45 AYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEG 124 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHh
Confidence 367999999999999999999999999999999999999999999999999999999999999999 6699999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCH---------------------------HHHHHHHH
Q 007075 74 VVYTVQGKMDAAAEMIEKAIAANPT--YAEAYNNLGVLYRDAGSI---------------------------SLAIDAYE 124 (619)
Q Consensus 74 ~~~~~~g~~~eA~~~~~~al~~~p~--~~~a~~~Lg~~~~~~g~~---------------------------~eA~~~~~ 124 (619)
.++...|++++|+..|+++++++|+ ++.+++++|.+|..+|+. ++|+.+|+
T Consensus 125 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 204 (228)
T 4i17_A 125 QKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLG 204 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999999999998 99999999
Q ss_pred HHHHhCCCCHHHHHH
Q 007075 125 QCLKIDPDSRNAGQN 139 (619)
Q Consensus 125 ~al~~~P~~~~a~~~ 139 (619)
++++++|++..+...
T Consensus 205 ~a~~l~p~~~~~~~~ 219 (228)
T 4i17_A 205 EAVTLSPNRTEIKQM 219 (228)
T ss_dssp HHHHHCTTCHHHHHH
T ss_pred HHhhcCCCCHHHHHH
Confidence 999999999876554
No 38
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.70 E-value=1.4e-16 Score=149.07 Aligned_cols=160 Identities=12% Similarity=0.007 Sum_probs=141.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYT-VQG 80 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~-~~g 80 (619)
+.+|..+...|++++|+..|+++++.+|++..+++++|.++...|++++|+..++++++.+| ++..+..++.+.. ..+
T Consensus 10 ~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~ 88 (176)
T 2r5s_A 10 LKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQA 88 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhc
Confidence 57899999999999999999999999999999999999999999999999999999999999 8877766665533 334
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHHHhhcCCcHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN--AGQNRLLAMNYINEGHDDKLFEA 158 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~--a~~~~~la~~~~~~g~~~~a~~~ 158 (619)
+..+|+..++++++.+|+++.+++++|.++...|++++|+..|+++++.+|+... ++.+ ++.++...|+.+++...
T Consensus 89 ~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~--l~~~~~~~g~~~~A~~~ 166 (176)
T 2r5s_A 89 AESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKT--FMDILSALGQGNAIASK 166 (176)
T ss_dssp TSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHH--HHHHHHHHCSSCHHHHH
T ss_pred ccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHH--HHHHHHHhCCCCcHHHH
Confidence 4456899999999999999999999999999999999999999999999998644 5555 78888899999998888
Q ss_pred HHHHHH
Q 007075 159 HRDWGK 164 (619)
Q Consensus 159 ~~~~~~ 164 (619)
+++...
T Consensus 167 y~~al~ 172 (176)
T 2r5s_A 167 YRRQLY 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776543
No 39
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.70 E-value=1e-16 Score=174.63 Aligned_cols=156 Identities=16% Similarity=0.118 Sum_probs=146.3
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHhhCCCCHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDR---------DNLDKAVECYQMALSIKPNFSQSLNN 71 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~---------g~~~~A~~~~~~al~l~p~~~~~~~~ 71 (619)
|+++|.+|...|++++|+.+|+++++++|+ ..++.++|.++... |++++|+++|+++++++|++..++++
T Consensus 140 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 218 (474)
T 4abn_A 140 WNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYI 218 (474)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 468999999999999999999999999999 79999999999999 99999999999999999999999999
Q ss_pred HHHHHHHc--------CCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 007075 72 LGVVYTVQ--------GKMDAAAEMIEKAIAANP---TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140 (619)
Q Consensus 72 lg~~~~~~--------g~~~eA~~~~~~al~~~p---~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~ 140 (619)
+|.+|... |++++|+.+|+++++++| +++.+++++|.+|..+|++++|+++|+++++++|++..++.+
T Consensus 219 lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~- 297 (474)
T 4abn_A 219 LGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQR- 297 (474)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH-
T ss_pred HHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH-
Confidence 99999999 999999999999999999 999999999999999999999999999999999999988877
Q ss_pred HHHHHHhhcCCcHHHHHHH
Q 007075 141 LLAMNYINEGHDDKLFEAH 159 (619)
Q Consensus 141 ~la~~~~~~g~~~~a~~~~ 159 (619)
++..+...|+.+++.+.+
T Consensus 298 -l~~~~~~lg~~~eAi~~~ 315 (474)
T 4abn_A 298 -EQQLLEFLSRLTSLLESK 315 (474)
T ss_dssp -HHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHHHh
Confidence 566666777777776644
No 40
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.69 E-value=6.1e-16 Score=151.91 Aligned_cols=161 Identities=19% Similarity=0.209 Sum_probs=149.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF-------SQSLNNLG 73 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~-------~~~~~~lg 73 (619)
++.+|.++...|++++|+.+|+++++.+ .+..++..+|.++...|++++|+++++++++++|++ ..++..+|
T Consensus 8 ~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~ 86 (258)
T 3uq3_A 8 EKAEGNKFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIG 86 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHH
Confidence 4679999999999999999999999999 999999999999999999999999999999998876 78999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHH--------------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 007075 74 VVYTVQGKMDAAAEMIEKAIA--------------------------ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCL 127 (619)
Q Consensus 74 ~~~~~~g~~~eA~~~~~~al~--------------------------~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al 127 (619)
.++...|++++|+.+++++++ .+|.+..++..+|.++...|++++|+..|++++
T Consensus 87 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 166 (258)
T 3uq3_A 87 NAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMI 166 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999999999999 666778899999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 128 KIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 128 ~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
+.+|++..++.+ ++..+...|+++++.+.+++..+
T Consensus 167 ~~~~~~~~~~~~--l~~~~~~~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 167 KRAPEDARGYSN--RAAALAKLMSFPEAIADCNKAIE 201 (258)
T ss_dssp HHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcCcccHHHHHH--HHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999887776 78888999999998888776544
No 41
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.69 E-value=8.4e-17 Score=183.16 Aligned_cols=148 Identities=11% Similarity=-0.035 Sum_probs=138.7
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++++|.++...|++++|+..|+++++.+|++..+++++|.++..+|++++|++.|+++++++|++..+++++|.++..+|
T Consensus 436 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g 515 (681)
T 2pzi_A 436 PLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAG 515 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCC
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~ 151 (619)
++++ +.+|+++++++|++..+++++|.++..+|++++|++.|+++++++|++..++.+ ++.+++..+.
T Consensus 516 ~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~--~~~~~~~~~~ 583 (681)
T 2pzi_A 516 NTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLT--SAVTLLSGRS 583 (681)
T ss_dssp CCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHH--HHHHTC----
T ss_pred ChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHH--HHHHHHccCC
Confidence 9999 999999999999999999999999999999999999999999999999998887 5666665554
No 42
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.69 E-value=2.9e-16 Score=168.22 Aligned_cols=205 Identities=13% Similarity=0.104 Sum_probs=157.7
Q ss_pred CccceEEcCCCccc--cCCCCCCC-------CCCCCCCCCCCCeEEEecCCCC---cCCHHHHHHHHHHHHHC--CCceE
Q 007075 324 HVEELIRLPECFLC--YTPSPEAG-------PVCPTPALTNGFITFGSFNNLA---KITPKVLQVWARILCAV--PNSRL 389 (619)
Q Consensus 324 ~~E~l~~lp~~~~~--~~p~~~~~-------~~~~~~~l~~~~~~f~~~~~~~---K~~~~~~~~~~~il~~~--P~a~l 389 (619)
..+++..+|++... |.|....+ ..+...+++++ ++|++++++. |..+.+++++.++..+. |+.+|
T Consensus 210 ~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l 288 (439)
T 3fro_A 210 FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF 288 (439)
T ss_dssp GTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEE
T ss_pred cCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEE
Confidence 46789999985321 22221000 00112345666 7899999864 89999999999998877 99999
Q ss_pred EEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccC
Q 007075 390 VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAG 468 (619)
Q Consensus 390 ~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g 468 (619)
+++|.+ .....+.+++..++.| +.+.|.|.++ .++...+|+.+|++|-|+.+ +.|++++|||+||+|||+...
T Consensus 289 ~i~G~g--~~~~~~~l~~~~~~~~---~~~~~~g~~~-~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~ 362 (439)
T 3fro_A 289 IIIGKG--DPELEGWARSLEEKHG---NVKVITEMLS-REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV 362 (439)
T ss_dssp EEECCC--CHHHHHHHHHHHHHCT---TEEEECSCCC-HHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESS
T ss_pred EEEcCC--ChhHHHHHHHHHhhcC---CEEEEcCCCC-HHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCC
Confidence 999976 3445588899898988 6888999887 68899999999999999977 779999999999999998543
Q ss_pred CccccchhHHHHHhcCCCcccc--CCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHH
Q 007075 469 SVHAHNVGVSLLTKVGLKHLIA--KNEDEYVQLALQLAS-DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545 (619)
Q Consensus 469 ~~~~~r~~~~~l~~~gl~~~v~--~~~~~y~~~a~~L~~-d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~ 545 (619)
. +..-+..-| .+++. .|++++++...+++. |++.++++++..++.. .. |+++.++++++++|+++.+
T Consensus 363 ~------~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~~--~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 363 G------GLRDIITNE-TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA-MS--FSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp T------HHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH-HT--SCHHHHHHHHHHHHHTCSC
T ss_pred C------CcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-hh--CcHHHHHHHHHHHHHHHHH
Confidence 2 222222224 55554 499999999999999 9999999999998876 33 9999999999999998764
No 43
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.69 E-value=5.2e-16 Score=157.43 Aligned_cols=161 Identities=12% Similarity=0.038 Sum_probs=149.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+.+|..+...|++++|+..|+++++.+|++..+++++|.++...|++++|+..++++++.+|+........+..+...++
T Consensus 121 ~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~ 200 (287)
T 3qou_A 121 AQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAA 200 (287)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcc
Confidence 57899999999999999999999999999999999999999999999999999999999999888788888888999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHhhcCCcHHHHHHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS--RNAGQNRLLAMNYINEGHDDKLFEAH 159 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~--~~a~~~~~la~~~~~~g~~~~a~~~~ 159 (619)
.++|+..|+++++.+|+++.+++++|.+|...|++++|+..|+++++.+|++ ..++.+ ++..+...|+.+++...+
T Consensus 201 ~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~--l~~~~~~~g~~~~a~~~~ 278 (287)
T 3qou_A 201 DTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXT--FQEILAALGTGDALASXY 278 (287)
T ss_dssp SCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHH--HHHHHHHHCTTCHHHHHH
T ss_pred cCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHH--HHHHHHHcCCCCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 555555 788888889988888877
Q ss_pred HHHHH
Q 007075 160 RDWGK 164 (619)
Q Consensus 160 ~~~~~ 164 (619)
++...
T Consensus 279 r~al~ 283 (287)
T 3qou_A 279 RRQLY 283 (287)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76544
No 44
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.69 E-value=3e-15 Score=143.71 Aligned_cols=160 Identities=18% Similarity=0.154 Sum_probs=146.9
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-CCHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDR-DNLDKAVECYQMALS--IKPNFSQSLNNLGVVYT 77 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~-g~~~~A~~~~~~al~--l~p~~~~~~~~lg~~~~ 77 (619)
++.+|.++...|++++|+.+|+++++.+|.+..++..+|.++... |++++|+.+++++++ ..|.+..++.++|.++.
T Consensus 45 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (225)
T 2vq2_A 45 WLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSA 124 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999 999999999999999 67778899999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhhcCCcHHHH
Q 007075 78 VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP-DSRNAGQNRLLAMNYINEGHDDKLF 156 (619)
Q Consensus 78 ~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P-~~~~a~~~~~la~~~~~~g~~~~a~ 156 (619)
..|++++|+.+++++++..|++..++..+|.++...|++++|+..++++++..| ++...+.. ++..+...|+.+++.
T Consensus 125 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~ 202 (225)
T 2vq2_A 125 KQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLL--GWKIAKALGNAQAAY 202 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHH--HHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHH--HHHHHHhcCcHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 88877643 666777788887766
Q ss_pred HHHHHH
Q 007075 157 EAHRDW 162 (619)
Q Consensus 157 ~~~~~~ 162 (619)
...+..
T Consensus 203 ~~~~~~ 208 (225)
T 2vq2_A 203 EYEAQL 208 (225)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655544
No 45
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.69 E-value=3.2e-15 Score=155.45 Aligned_cols=95 Identities=23% Similarity=0.388 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 007075 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145 (619)
Q Consensus 66 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~ 145 (619)
..++.++|.++...|++++|+.+|+++++.+|+++.++.++|.++...|++++|+..|+++++++|++..++.+ ++..
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~--l~~~ 294 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYN--LGIS 294 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH--HHHH
Confidence 34444445555555555555555555555555555555555555555555555555555555555544444433 4444
Q ss_pred HhhcCCcHHHHHHHHHH
Q 007075 146 YINEGHDDKLFEAHRDW 162 (619)
Q Consensus 146 ~~~~g~~~~a~~~~~~~ 162 (619)
|...|+++++.+.+++.
T Consensus 295 ~~~~g~~~~A~~~~~~a 311 (368)
T 1fch_A 295 CINLGAHREAVEHFLEA 311 (368)
T ss_dssp HHHHTCHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHH
Confidence 45555555554444443
No 46
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.69 E-value=1.7e-16 Score=144.41 Aligned_cols=122 Identities=10% Similarity=-0.020 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 16 MAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95 (619)
Q Consensus 16 ~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~ 95 (619)
.+...|++++.++|++..+++++|.++...|++++|+..|+++++++|+++.++.++|.++...|++++|+.+|++++++
T Consensus 5 ~~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 5 SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp -CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 33456889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 007075 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137 (619)
Q Consensus 96 ~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~ 137 (619)
+|+++.+++++|.+|..+|++++|+.+|+++++++|+++...
T Consensus 85 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 126 (148)
T 2vgx_A 85 DIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFX 126 (148)
T ss_dssp STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGH
T ss_pred CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcch
Confidence 999999999999999999999999999999999999887653
No 47
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.68 E-value=1e-15 Score=149.21 Aligned_cols=162 Identities=14% Similarity=0.126 Sum_probs=143.5
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH---HHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHC---AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQ---SLNNLGV 74 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~---~~~~lg~ 74 (619)
++++|..++..|++++|+..|+++++.+|.+ ..+++.+|.++...|++++|++.|+++++.+|++.. +++.+|.
T Consensus 7 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~ 86 (225)
T 2yhc_A 7 IYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGL 86 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHH
Confidence 4789999999999999999999999998876 479999999999999999999999999999999864 7899999
Q ss_pred HHHH------------------cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCHHHH
Q 007075 75 VYTV------------------QGKMDAAAEMIEKAIAANPTYAEAY-----------------NNLGVLYRDAGSISLA 119 (619)
Q Consensus 75 ~~~~------------------~g~~~eA~~~~~~al~~~p~~~~a~-----------------~~Lg~~~~~~g~~~eA 119 (619)
++.. .|++++|+..|+++++.+|++..++ ..+|.+|...|++++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A 166 (225)
T 2yhc_A 87 TNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAV 166 (225)
T ss_dssp HHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 9876 5789999999999999999987554 5789999999999999
Q ss_pred HHHHHHHHHhCCCCHHH-HHHHHHHHHHhhcCCcHHHHHHHHHH
Q 007075 120 IDAYEQCLKIDPDSRNA-GQNRLLAMNYINEGHDDKLFEAHRDW 162 (619)
Q Consensus 120 ~~~~~~al~~~P~~~~a-~~~~~la~~~~~~g~~~~a~~~~~~~ 162 (619)
+..|+++++..|+++.. .....++.+|...|+.+++.+.++..
T Consensus 167 ~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l 210 (225)
T 2yhc_A 167 VNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKII 210 (225)
T ss_dssp HHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 99999999999998642 22334889999999999988777654
No 48
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.68 E-value=1.3e-15 Score=155.41 Aligned_cols=160 Identities=16% Similarity=0.145 Sum_probs=116.9
Q ss_pred HHHHHHHHHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 2 YNLGVAYGEML-KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 2 ~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
+.+|.++...| ++++|+.+|+++++.+|++..++..+|.++...|++++|+++|++++++.|++..++..+|.++...|
T Consensus 94 ~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 173 (330)
T 3hym_B 94 FAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTN 173 (330)
T ss_dssp HHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHh
Confidence 56777777777 77777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------CCCHHHHHHHHHHHHHhhcCC
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID---------PDSRNAGQNRLLAMNYINEGH 151 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~---------P~~~~a~~~~~la~~~~~~g~ 151 (619)
++++|+.+++++++.+|+++.++..+|.++...|++++|+..++++++.. |....++.+ ++..+...|+
T Consensus 174 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--la~~~~~~g~ 251 (330)
T 3hym_B 174 NSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNN--LGHVCRKLKK 251 (330)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHH--HHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHH--HHHHHHHhcC
Confidence 77777777777777777777777777777777777777777777777765 444444444 6666677777
Q ss_pred cHHHHHHHHHHH
Q 007075 152 DDKLFEAHRDWG 163 (619)
Q Consensus 152 ~~~a~~~~~~~~ 163 (619)
++++.+.+++..
T Consensus 252 ~~~A~~~~~~a~ 263 (330)
T 3hym_B 252 YAEALDYHRQAL 263 (330)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777766665543
No 49
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.68 E-value=4.2e-15 Score=154.50 Aligned_cols=162 Identities=21% Similarity=0.302 Sum_probs=144.8
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++++|..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+++|+++++++|++..++..+|.++...|
T Consensus 67 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g 146 (368)
T 1fch_A 67 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNES 146 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCC-------------------------------------------------C--CHHHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANP-------------------------------------------------T--YAEAYNNLGVL 109 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p-------------------------------------------------~--~~~a~~~Lg~~ 109 (619)
++++|+..++++++..| + .+.++.++|.+
T Consensus 147 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~ 226 (368)
T 1fch_A 147 LQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVL 226 (368)
T ss_dssp CHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHH
Confidence 99888888777666554 4 67888999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 110 YRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 110 ~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
+...|++++|+..|+++++++|++..++.+ ++..+...|+++++.+.+++..+
T Consensus 227 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~--l~~~~~~~g~~~~A~~~~~~al~ 279 (368)
T 1fch_A 227 FNLSGEYDKAVDCFTAALSVRPNDYLLWNK--LGATLANGNQSEEAVAAYRRALE 279 (368)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCcCCHHHHHH--HHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999998887766 77888889999988887776544
No 50
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.67 E-value=3.4e-15 Score=152.22 Aligned_cols=163 Identities=13% Similarity=0.077 Sum_probs=142.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRD-NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g-~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
..++.++...|++++|+..++++++.+|+++.++..+|.++...| ++++|+++|+++++++|++..++..+|.++...|
T Consensus 60 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 139 (330)
T 3hym_B 60 PVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVES 139 (330)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcc
Confidence 357788888899999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~ 160 (619)
++++|+..++++++..|++..++..+|.++...|++++|+..|+++++.+|++..++.. ++..+...|+++++...++
T Consensus 140 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~--l~~~~~~~~~~~~A~~~~~ 217 (330)
T 3hym_B 140 EHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHE--VGVVAFQNGEWKTAEKWFL 217 (330)
T ss_dssp CHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHH--HHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHH--HHHHHHHcccHHHHHHHHH
Confidence 99999999999999999988889999999999999999999999999999988877666 7778888899888888877
Q ss_pred HHHHHH
Q 007075 161 DWGKRF 166 (619)
Q Consensus 161 ~~~~~~ 166 (619)
+..+..
T Consensus 218 ~a~~~~ 223 (330)
T 3hym_B 218 DALEKI 223 (330)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 765543
No 51
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.67 E-value=6.1e-16 Score=140.96 Aligned_cols=115 Identities=22% Similarity=0.334 Sum_probs=110.0
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++++|.+|++.|++++|+.+|+++++++|+++.+|+++|.++...|++++|+.+|+++++++|+++.++.++|.++...|
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~ 113 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKND 113 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 007075 81 KMDAAAEM-IEKAIAANPTYAEAYNNLGVLYRDAGS 115 (619)
Q Consensus 81 ~~~eA~~~-~~~al~~~p~~~~a~~~Lg~~~~~~g~ 115 (619)
++++|... ++++++++|+++.++..++.++..+|+
T Consensus 114 ~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 114 VTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp SSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred ChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 99887766 599999999999999999999988875
No 52
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.67 E-value=1e-15 Score=152.32 Aligned_cols=160 Identities=16% Similarity=0.145 Sum_probs=143.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC----HHHHHHHHHHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF----SQSLNNLGVVYT 77 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~----~~~~~~lg~~~~ 77 (619)
+.+|..+...|++++|+..|+++++.+|++..++..+|.++...|++++|+++++++++ .|.+ ..++.++|.++.
T Consensus 7 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~ 85 (272)
T 3u4t_A 7 FRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILM 85 (272)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999 4433 446999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHhhcCCcHHHH
Q 007075 78 VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA-MNYINEGHDDKLF 156 (619)
Q Consensus 78 ~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la-~~~~~~g~~~~a~ 156 (619)
..|++++|+.+|+++++.+|++..++.++|.++..+|++++|+.+|+++++++|++..++.+ ++ ..|. .++++++.
T Consensus 86 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~--l~~~~~~-~~~~~~A~ 162 (272)
T 3u4t_A 86 KKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYE--LGQAYYY-NKEYVKAD 162 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHH--HHHHHHH-TTCHHHHH
T ss_pred HcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHH--HHHHHHH-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988877 55 4444 44888888
Q ss_pred HHHHHHHHH
Q 007075 157 EAHRDWGKR 165 (619)
Q Consensus 157 ~~~~~~~~~ 165 (619)
+.+++..+.
T Consensus 163 ~~~~~a~~~ 171 (272)
T 3u4t_A 163 SSFVKVLEL 171 (272)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777665443
No 53
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.67 E-value=3.3e-15 Score=130.54 Aligned_cols=133 Identities=41% Similarity=0.642 Sum_probs=128.5
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+..|+++++.+|.+..++..+|.++...|++++|+.+++++++..|.+...+..+|.++...|
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG 83 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~ 133 (619)
++++|+..++++++..|.+..++..+|.++...|++++|+..++++++.+|++
T Consensus 84 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 84 DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999999999999999999999999998863
No 54
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.67 E-value=3.1e-15 Score=154.13 Aligned_cols=160 Identities=19% Similarity=0.186 Sum_probs=146.8
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|+++++.+|+++.+++.+|.++...|++++|+..++++++++|++..++..+|.++...|
T Consensus 6 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 85 (359)
T 3ieg_A 6 HLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQG 85 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCC---CCHHHHHHH------------HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANP---TYAEAYNNL------------GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p---~~~~a~~~L------------g~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~ 145 (619)
++++|+..|+++++.+| ++..++..+ |.++...|++++|+..++++++.+|++..++.. ++..
T Consensus 86 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~--~~~~ 163 (359)
T 3ieg_A 86 KLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELREL--RAEC 163 (359)
T ss_dssp CHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHH
T ss_pred ChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHH--HHHH
Confidence 99999999999999999 888888777 789999999999999999999999999877666 7888
Q ss_pred HhhcCCcHHHHHHHHHH
Q 007075 146 YINEGHDDKLFEAHRDW 162 (619)
Q Consensus 146 ~~~~g~~~~a~~~~~~~ 162 (619)
+...|+++++.+.+++.
T Consensus 164 ~~~~~~~~~A~~~~~~~ 180 (359)
T 3ieg_A 164 FIKEGEPRKAISDLKAA 180 (359)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHH
Confidence 88899998888776654
No 55
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.66 E-value=5.2e-15 Score=152.41 Aligned_cols=162 Identities=17% Similarity=0.143 Sum_probs=152.1
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CCHHHHHHH-----
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP---NFSQSLNNL----- 72 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p---~~~~~~~~l----- 72 (619)
++.+|.++...|++++|+..|+++++.+|++..++..+|.++...|++++|+..|+++++++| ++..++..+
T Consensus 40 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 119 (359)
T 3ieg_A 40 YYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADE 119 (359)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999999999999999999999999999999 888888777
Q ss_pred -------HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 007075 73 -------GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145 (619)
Q Consensus 73 -------g~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~ 145 (619)
|.++...|++++|+.+++++++.+|+++.++..+|.++...|++++|+..++++++.+|++..++.. ++..
T Consensus 120 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~--la~~ 197 (359)
T 3ieg_A 120 MQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYK--ISTL 197 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHH--HHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999988776 7888
Q ss_pred HhhcCCcHHHHHHHHHHHH
Q 007075 146 YINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 146 ~~~~g~~~~a~~~~~~~~~ 164 (619)
+...|+++++.+.+++..+
T Consensus 198 ~~~~~~~~~A~~~~~~a~~ 216 (359)
T 3ieg_A 198 YYQLGDHELSLSEVRECLK 216 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHh
Confidence 8999999998887776543
No 56
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.65 E-value=3.4e-15 Score=166.22 Aligned_cols=153 Identities=19% Similarity=0.110 Sum_probs=126.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 007075 11 MLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIE 90 (619)
Q Consensus 11 ~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~ 90 (619)
.|++++|+.+|+++++.+|++..+++++|.++...|++++|+++|+++++++|++..++.++|.++..+|++++|+.+|+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc---CCcHHHHHHHHHHHHH
Q 007075 91 KAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINE---GHDDKLFEAHRDWGKR 165 (619)
Q Consensus 91 ~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~---g~~~~a~~~~~~~~~~ 165 (619)
++++++|++..+++++|.+|..+|++++|+++|+++++++|++..++.+ ++..+... |+.+++.+.+++..+.
T Consensus 82 ~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~--l~~~~~~~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 82 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQ--LLNWRRRLCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHhhccccHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999988877 67777888 8888888877765443
No 57
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.64 E-value=1e-15 Score=137.85 Aligned_cols=120 Identities=10% Similarity=0.007 Sum_probs=112.1
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 007075 19 VFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT 98 (619)
Q Consensus 19 ~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~ 98 (619)
..|++++..+|++..+++.+|.++...|++++|+..|+++++++|+++.++.++|.++...|++++|+.+|+++++++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 007075 99 YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138 (619)
Q Consensus 99 ~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~ 138 (619)
++.+++++|.+|..+|++++|+.+|+++++++|+++....
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 124 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEA 124 (142)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHH
Confidence 9999999999999999999999999999999998876543
No 58
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.64 E-value=2.8e-15 Score=164.14 Aligned_cols=184 Identities=10% Similarity=0.073 Sum_probs=149.7
Q ss_pred CCCCCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCc-eEEEeccCCCC--------HHH---HHHHHHHHHHcCCCCCc
Q 007075 353 LTNGFITFGSFNNL--AKITPKVLQVWARILCAVPNS-RLVVKCKPFCC--------DSV---RHRFLSTLEQLGLESLR 418 (619)
Q Consensus 353 l~~~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a-~l~l~g~~~~~--------~~~---~~~l~~~~~~~Gi~~~r 418 (619)
++++.++|++++++ .|..+.++++|..+.++.|+. +|+++|.+.+. .+. .+.+++.++++|+. ++
T Consensus 258 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~-~~ 336 (499)
T 2r60_A 258 ERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCR-GK 336 (499)
T ss_dssp GGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-TT
T ss_pred cCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCC-ce
Confidence 45566789999988 699999999999998877776 78888862111 112 78999999999998 99
Q ss_pred EEEcCCccCcHHHHHhcccC----cEeecCCCC-CCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCcccc--C
Q 007075 419 VDLLPLILLNHDHMQAYSLM----DISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA--K 491 (619)
Q Consensus 419 v~f~g~~~~~~~~~~~~~~~----Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~--~ 491 (619)
|+|+|.++ ..+...+|+.+ ||++.|+.+ ++|++++|||++|+|||+.... |..-+..-|..+++. .
T Consensus 337 V~~~G~v~-~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~------g~~e~v~~~~~g~l~~~~ 409 (499)
T 2r60_A 337 VSMFPLNS-QQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNG------GPAEILDGGKYGVLVDPE 409 (499)
T ss_dssp EEEEECCS-HHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSB------HHHHHTGGGTSSEEECTT
T ss_pred EEECCCCC-HHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCC------CHHHHhcCCceEEEeCCC
Confidence 99999997 68999999999 999999977 7799999999999999985532 222222224444444 5
Q ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHH
Q 007075 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546 (619)
Q Consensus 492 ~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~~ 546 (619)
|++++++.+.+++.|++.++++++..++.... .|+++.++++++++|+++..+
T Consensus 410 d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~--~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 410 DPEDIARGLLKAFESEETWSAYQEKGKQRVEE--RYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH--HSBHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHhh
Confidence 89999999999999999999999998887654 399999999999999999864
No 59
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.64 E-value=5.3e-16 Score=162.71 Aligned_cols=200 Identities=12% Similarity=0.051 Sum_probs=148.9
Q ss_pred ccceEEcCCCccc--cCCCCCCC---CCCCCCCCCCCCeEEEecCCC--CcCCHHHHHHHHHHHHH-CCCceEEEeccCC
Q 007075 325 VEELIRLPECFLC--YTPSPEAG---PVCPTPALTNGFITFGSFNNL--AKITPKVLQVWARILCA-VPNSRLVVKCKPF 396 (619)
Q Consensus 325 ~E~l~~lp~~~~~--~~p~~~~~---~~~~~~~l~~~~~~f~~~~~~--~K~~~~~~~~~~~il~~-~P~a~l~l~g~~~ 396 (619)
.+++..+|++... |.|..... ..+...+++++.+++++++++ .|..+.+++++..+.++ .|+.+|+++|.+.
T Consensus 159 ~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~ 238 (374)
T 2iw1_A 159 PERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDK 238 (374)
T ss_dssp GGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC
T ss_pred hhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCC
Confidence 5788889875321 22211100 011223456777889999987 68999999999988777 6899999999762
Q ss_pred CCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCCccccch
Q 007075 397 CCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHNV 475 (619)
Q Consensus 397 ~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~ 475 (619)
.+.+++.++++|+. ++|+|+|. ..+...+|+.+|+++.|+.+ ++|++++|||++|+|||+......
T Consensus 239 -----~~~~~~~~~~~~~~-~~v~~~g~---~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~---- 305 (374)
T 2iw1_A 239 -----PRKFEALAEKLGVR-SNVHFFSG---RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGY---- 305 (374)
T ss_dssp -----CHHHHHHHHHHTCG-GGEEEESC---CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTT----
T ss_pred -----HHHHHHHHHHcCCC-CcEEECCC---cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCc----
Confidence 25678888899998 89999997 35788999999999999876 779999999999999998654321
Q ss_pred hHHHHHhcCCCcccc---CCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHH
Q 007075 476 GVSLLTKVGLKHLIA---KNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542 (619)
Q Consensus 476 ~~~~l~~~gl~~~v~---~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~ 542 (619)
..++.. |..+++. .|.+++++.+.+++.|++.++++++..++.... +++..+++.+++.++.
T Consensus 306 -~e~i~~-~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 306 -AHYIAD-ANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADT---QDLYSLPEKAADIITG 370 (374)
T ss_dssp -THHHHH-HTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH---SCCSCHHHHHHHHHHC
T ss_pred -hhhhcc-CCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHH
Confidence 223333 3334443 389999999999999999999999999887653 4677777777777654
No 60
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.64 E-value=4e-15 Score=147.94 Aligned_cols=162 Identities=17% Similarity=0.166 Sum_probs=142.9
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHC----AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~----~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 76 (619)
++.+|.++...|++++|+.+|+++++ .|.+ ..++.++|.++...|++++|+++|+++++++|++..++.++|.++
T Consensus 40 ~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 118 (272)
T 3u4t_A 40 YNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYF 118 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 36789999999999999999999999 3333 556999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCC---cH
Q 007075 77 TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH---DD 153 (619)
Q Consensus 77 ~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~---~~ 153 (619)
...|++++|+.+++++++.+|.++.++.++|......+++++|+..|+++++++|++..++.. ++..+...++ .+
T Consensus 119 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~--~~~~~~~~~~~~~~~ 196 (272)
T 3u4t_A 119 YNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLW--RARANAAQDPDTKQG 196 (272)
T ss_dssp HHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH--HHHHHHHHSTTCSSC
T ss_pred HHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHH--HHHHHHHcCcchhhH
Confidence 999999999999999999999999999999955556679999999999999999999887776 5666666666 66
Q ss_pred HHHHHHHHHHHH
Q 007075 154 KLFEAHRDWGKR 165 (619)
Q Consensus 154 ~a~~~~~~~~~~ 165 (619)
++...+++..+.
T Consensus 197 ~A~~~~~~a~~~ 208 (272)
T 3u4t_A 197 LAKPYYEKLIEV 208 (272)
T ss_dssp TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 677766665544
No 61
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.63 E-value=5.8e-15 Score=141.45 Aligned_cols=131 Identities=17% Similarity=0.298 Sum_probs=124.3
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++++|..+...|++++|+..|++++ +| ++.+++++|.++...|++++|+++|+++++++|++..+++++|.++...|
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~ 85 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTE 85 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcc
Confidence 4789999999999999999999995 34 78899999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 007075 81 KMDAAAEMIEKAIAANPTYA----------------EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~----------------~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~ 134 (619)
++++|+.+|+++++..|++. .+++++|.++..+|++++|+.+|+++++++|++.
T Consensus 86 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 86 KYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp CHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 99999999999999888766 9999999999999999999999999999999864
No 62
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.63 E-value=1.3e-15 Score=173.45 Aligned_cols=150 Identities=13% Similarity=-0.045 Sum_probs=143.1
Q ss_pred HHcCCHHHHHHHHHHHH--------HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 9 GEMLKFDMAIVFYELAF--------HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 9 ~~~g~~~~A~~~~~~al--------~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
...|++++|++.|++++ +.+|++..+++.+|.++..+|++++|++.|+++++++|++..+++++|.++..+|
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g 481 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTG 481 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHT
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcC
Confidence 56899999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~ 160 (619)
++++|+..|+++++++|+++.+++++|.++..+|++++ +++|+++++++|++..++++ ++.++...|++++|.+.++
T Consensus 482 ~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~--lg~~~~~~g~~~~A~~~~~ 558 (681)
T 2pzi_A 482 DYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFG--LARARSAEGDRVGAVRTLD 558 (681)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHH--HHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999888 7888899999999887765
Q ss_pred H
Q 007075 161 D 161 (619)
Q Consensus 161 ~ 161 (619)
+
T Consensus 559 ~ 559 (681)
T 2pzi_A 559 E 559 (681)
T ss_dssp T
T ss_pred h
Confidence 4
No 63
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.63 E-value=9e-15 Score=135.52 Aligned_cols=134 Identities=19% Similarity=0.266 Sum_probs=130.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+.+|.++...|++++|+.+++++++.+|.+..++..+|.++...|++++|+++++++++.+|.+..++..+|.++...|+
T Consensus 46 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 125 (186)
T 3as5_A 46 LHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGR 125 (186)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN 135 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~ 135 (619)
+++|+.+++++++..|++..++..+|.++...|++++|+.+++++++.+|++..
T Consensus 126 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 179 (186)
T 3as5_A 126 FDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGASV 179 (186)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchh
Confidence 999999999999999999999999999999999999999999999999887653
No 64
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.63 E-value=1.6e-14 Score=146.74 Aligned_cols=147 Identities=13% Similarity=-0.006 Sum_probs=129.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH--HHHHHc
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLG--VVYTVQ 79 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg--~~~~~~ 79 (619)
+.+|.++...|++++|+..|++ |.+..++..+|.++..+|++++|++.|+++++.+|++.......+ .++...
T Consensus 105 ~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~ 179 (291)
T 3mkr_A 105 LMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGG 179 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCc
Confidence 5788999999999999999987 889999999999999999999999999999999999865444333 333445
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHH
Q 007075 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155 (619)
Q Consensus 80 g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a 155 (619)
|++++|+..|+++++.+|+++.+++++|.++..+|++++|+..|+++++++|+++.++.+ ++..+...|+.+++
T Consensus 180 ~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~--l~~~~~~~g~~~ea 253 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLIN--LVVLSQHLGKPPEV 253 (291)
T ss_dssp THHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCCHHH
T ss_pred hHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHcCCCHHH
Confidence 899999999999999999999999999999999999999999999999999999999888 56677778888654
No 65
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.63 E-value=4.2e-15 Score=169.44 Aligned_cols=181 Identities=11% Similarity=0.034 Sum_probs=145.8
Q ss_pred CCCCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEeccCCC-------CHHHHHHHHHHHHHcCCCCCcEEEcCC
Q 007075 354 TNGFITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVKCKPFC-------CDSVRHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 354 ~~~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~-------~~~~~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
+.+.++|++++|+ .|..+.+++++.++.+..|+.+|+|+|.+.+ .....+.+++.+++.|+. ++|.|+|.
T Consensus 569 ~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~-~~V~flG~ 647 (816)
T 3s28_A 569 DKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLN-GQFRWISS 647 (816)
T ss_dssp CTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCB-BBEEEECC
T ss_pred CCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCC-CcEEEccC
Confidence 5567789999988 7999999999999988889999999998731 012678899999999998 99999996
Q ss_pred ccC---cHHHHHhcc-cCcEeecCCCC-CCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCcccc--CCHHHHH
Q 007075 425 ILL---NHDHMQAYS-LMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA--KNEDEYV 497 (619)
Q Consensus 425 ~~~---~~~~~~~~~-~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~--~~~~~y~ 497 (619)
+++ ..+...+|. .+|||+.|+.+ ++|++++|||+||+|||+.... |..-+..-|..+++. .|+++++
T Consensus 648 ~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~G------G~~EiV~dg~~Gllv~p~D~e~LA 721 (816)
T 3s28_A 648 QMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG------GPAEIIVHGKSGFHIDPYHGDQAA 721 (816)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSB------THHHHCCBTTTBEEECTTSHHHHH
T ss_pred ccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCC------ChHHHHccCCcEEEeCCCCHHHHH
Confidence 543 366777776 68999999977 7799999999999999985432 222222235555554 4899999
Q ss_pred HHHHHhh----cCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Q 007075 498 QLALQLA----SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543 (619)
Q Consensus 498 ~~a~~L~----~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~ 543 (619)
+.+.+++ .|++.+++++++.+++... .|+++.++++++++|+..
T Consensus 722 ~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~--~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 722 DTLADFFTKCKEDPSHWDEISKGGLQRIEE--KYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp HHHHHHHHHHHHCTHHHHHHHHHHHHHHHH--SCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHH
Confidence 9987666 8999999999999987654 399999999999999985
No 66
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.63 E-value=1.6e-14 Score=154.63 Aligned_cols=163 Identities=19% Similarity=0.195 Sum_probs=150.7
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|+++++.+|++..+++.+|.++...|++++|+.+|+++++++|++..++..+|.+|...|
T Consensus 29 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 108 (450)
T 2y4t_A 29 HLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQG 108 (450)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCH---HHHHHH------------HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYA---EAYNNL------------GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~---~a~~~L------------g~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~ 145 (619)
++++|+..|+++++.+|++. .++..+ |.++...|++++|+..|+++++..|++..++.. ++..
T Consensus 109 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~--l~~~ 186 (450)
T 2y4t_A 109 KLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELREL--RAEC 186 (450)
T ss_dssp CHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHH
T ss_pred CHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHH--HHHH
Confidence 99999999999999999988 776655 667999999999999999999999999887766 7888
Q ss_pred HhhcCCcHHHHHHHHHHHHH
Q 007075 146 YINEGHDDKLFEAHRDWGKR 165 (619)
Q Consensus 146 ~~~~g~~~~a~~~~~~~~~~ 165 (619)
|...|+++++.+.+++..+.
T Consensus 187 ~~~~g~~~~A~~~~~~~~~~ 206 (450)
T 2y4t_A 187 FIKEGEPRKAISDLKAASKL 206 (450)
T ss_dssp HHHTTCGGGGHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHh
Confidence 89999999998887766543
No 67
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.63 E-value=2.8e-14 Score=141.65 Aligned_cols=133 Identities=19% Similarity=0.222 Sum_probs=108.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+.+|.++...|++++|+.+|+++++.+|++..++.++|.++...|++++|+++|+++++++|++..++.++|.++...|+
T Consensus 47 ~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~ 126 (275)
T 1xnf_A 47 YERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGR 126 (275)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhcc
Confidence 56788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN 135 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~ 135 (619)
+++|+.+++++++.+|++......++.+ ...|++++|+..+++++...|++..
T Consensus 127 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~ 179 (275)
T 1xnf_A 127 DKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEVLKQHFEKSDKEQW 179 (275)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHSCCCST
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHHHHHHHhcCCcchH
Confidence 8888888888888888887666655544 5568888888888888887776643
No 68
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.62 E-value=1.6e-14 Score=154.73 Aligned_cols=162 Identities=17% Similarity=0.164 Sum_probs=150.8
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---HHHHHH-----
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS---QSLNNL----- 72 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~---~~~~~l----- 72 (619)
++.+|.++...|++++|+..|+++++.+|++..++..+|.+|..+|++++|+++|+++++++|++. .++..+
T Consensus 63 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 142 (450)
T 2y4t_A 63 YYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDE 142 (450)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999999999999999999999999999999988 776555
Q ss_pred -------HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 007075 73 -------GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145 (619)
Q Consensus 73 -------g~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~ 145 (619)
|.++...|++++|+.+|+++++..|.+..++..+|.+|...|++++|+..|+++++.+|++..++.. ++..
T Consensus 143 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~--l~~~ 220 (450)
T 2y4t_A 143 MQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYK--ISTL 220 (450)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHH--HHHH
Confidence 6679999999999999999999999999999999999999999999999999999999999888776 7888
Q ss_pred HhhcCCcHHHHHHHHHHHH
Q 007075 146 YINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 146 ~~~~g~~~~a~~~~~~~~~ 164 (619)
|...|+.+++.+.+++..+
T Consensus 221 ~~~~g~~~~A~~~~~~~~~ 239 (450)
T 2y4t_A 221 YYQLGDHELSLSEVRECLK 239 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 8999999999888776543
No 69
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.62 E-value=6.2e-14 Score=142.63 Aligned_cols=161 Identities=25% Similarity=0.317 Sum_probs=108.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---------------------
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS--------------------- 60 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~--------------------- 60 (619)
+.+|.++...|++++|+.+|+++++.+|++..++..+|.++...|++++|+++++++++
T Consensus 59 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (327)
T 3cv0_A 59 RSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDD 138 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC-------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHH
Confidence 45666667777777777777777777777777777777766666666666555554443
Q ss_pred ----------------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 007075 61 ----------------------------IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112 (619)
Q Consensus 61 ----------------------------l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~ 112 (619)
.+|++..++..+|.++...|++++|+.+++++++.+|++..++..+|.++..
T Consensus 139 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 218 (327)
T 3cv0_A 139 LNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN 218 (327)
T ss_dssp -------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 2344455666667777777777777777777777777777777777777777
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 113 ~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
.|++++|+..|+++++.+|++..++.+ ++..+...|+++++.+.+++..+
T Consensus 219 ~~~~~~A~~~~~~a~~~~~~~~~~~~~--l~~~~~~~g~~~~A~~~~~~a~~ 268 (327)
T 3cv0_A 219 GNRPQEALDAYNRALDINPGYVRVMYN--MAVSYSNMSQYDLAAKQLVRAIY 268 (327)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCHHHHHH--HHHHHHHhccHHHHHHHHHHHHH
Confidence 777777777777777777776666554 56666677777776666655443
No 70
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.61 E-value=1.1e-15 Score=158.82 Aligned_cols=154 Identities=16% Similarity=0.137 Sum_probs=136.3
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHH
Q 007075 11 MLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF---------------SQSLNNLGVV 75 (619)
Q Consensus 11 ~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~---------------~~~~~~lg~~ 75 (619)
++++++|+..|+++++.+|+.+.++.++|.++...|++++|+.+|+++++++|++ ..++.++|.+
T Consensus 126 L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 205 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMC 205 (336)
T ss_dssp EEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888899999999999999999999999999999999999999999998 6899999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHH
Q 007075 76 YTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155 (619)
Q Consensus 76 ~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a 155 (619)
+..+|++++|+.+|+++++++|+++.+++++|.+|..+|++++|+..|+++++++|++..++.+ ++.++...++.+++
T Consensus 206 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~--l~~~~~~~~~~~~a 283 (336)
T 1p5q_A 206 HLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQ--LAVCQQRIRRQLAR 283 (336)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHH--HHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH--HHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988777 66677777777665
Q ss_pred H-HHHHHHHHHH
Q 007075 156 F-EAHRDWGKRF 166 (619)
Q Consensus 156 ~-~~~~~~~~~~ 166 (619)
. ..++....++
T Consensus 284 ~~~~~~~~~~~~ 295 (336)
T 1p5q_A 284 EKKLYANMFERL 295 (336)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 3 3344443333
No 71
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.61 E-value=2.2e-14 Score=131.07 Aligned_cols=135 Identities=16% Similarity=0.218 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 007075 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYR 111 (619)
Q Consensus 32 ~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~ 111 (619)
+..+..+|.++...|++++|+.+|+++++.+|++..++.++|.++...|++++|+.+++++++.+|+++.+++++|.++.
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 56788888999999999999999999999999888899999999999999999999999999999998889999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 112 DAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 112 ~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
.+|++++|+.+|+++++++|++..++..+..+..+...|+++++.+.+......+
T Consensus 93 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 93 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHh
Confidence 9999999999999999999988887766666666777888888887777655544
No 72
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.61 E-value=9.6e-14 Score=141.22 Aligned_cols=162 Identities=19% Similarity=0.214 Sum_probs=142.0
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|+++++++++++|++..++..+|.++...|
T Consensus 24 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~ 103 (327)
T 3cv0_A 24 PMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 103 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHh-------------------------------------------------CCCCHHHHHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAA-------------------------------------------------NPTYAEAYNNLGVLYR 111 (619)
Q Consensus 81 ~~~eA~~~~~~al~~-------------------------------------------------~p~~~~a~~~Lg~~~~ 111 (619)
++++|+..++++++. +|++..++..+|.++.
T Consensus 104 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 183 (327)
T 3cv0_A 104 NANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYN 183 (327)
T ss_dssp CHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 888887776666544 4556777888888999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 112 DAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 112 ~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
..|++++|+..++++++.+|++..++.. ++..+...|+++++.+.+++..+
T Consensus 184 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~A~~~~~~a~~ 234 (327)
T 3cv0_A 184 LSNNYDSAAANLRRAVELRPDDAQLWNK--LGATLANGNRPQEALDAYNRALD 234 (327)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCcHHHHHH--HHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999988777665 77778888888888877766544
No 73
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.60 E-value=4.2e-15 Score=138.52 Aligned_cols=129 Identities=17% Similarity=0.224 Sum_probs=119.7
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH-HHHcCCH--HH
Q 007075 8 YGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVV-YTVQGKM--DA 84 (619)
Q Consensus 8 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~-~~~~g~~--~e 84 (619)
+...|++++|+..|+++++.+|++..+++.+|.++...|++++|+.+|+++++++|++..++.++|.+ +...|++ ++
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~ 99 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQ 99 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999 8899999 99
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 007075 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136 (619)
Q Consensus 85 A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a 136 (619)
|+.+++++++.+|++..++.++|.++...|++++|+.+|+++++++|++...
T Consensus 100 A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 100 TRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINR 151 (177)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccH
Confidence 9999999999999999999999999999999999999999999999987543
No 74
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.60 E-value=6.7e-15 Score=149.47 Aligned_cols=161 Identities=13% Similarity=0.033 Sum_probs=138.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPH------CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF------SQSL 69 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~ 69 (619)
...|.+|...|++++|+.+|++++++.+. .+.++.++|.+|..+|++++|+.+|++++++.+.. ..++
T Consensus 41 ~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~ 120 (292)
T 1qqe_A 41 VQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 (292)
T ss_dssp HHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34578899999999999999999997432 26789999999999999999999999999987643 4589
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH-----
Q 007075 70 NNLGVVYTVQ-GKMDAAAEMIEKAIAANPTY------AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG----- 137 (619)
Q Consensus 70 ~~lg~~~~~~-g~~~eA~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~----- 137 (619)
.++|.+|... |++++|+.+|++++++.|.. ..++.++|.++..+|++++|+.+|++++++.|++....
T Consensus 121 ~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 200 (292)
T 1qqe_A 121 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKD 200 (292)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHH
Confidence 9999999996 99999999999999998864 56799999999999999999999999999998875421
Q ss_pred HHHHHHHHHhhcCCcHHHHHHHHHH
Q 007075 138 QNRLLAMNYINEGHDDKLFEAHRDW 162 (619)
Q Consensus 138 ~~~~la~~~~~~g~~~~a~~~~~~~ 162 (619)
....++.++...|++++|...+++.
T Consensus 201 ~~~~lg~~~~~~g~~~~A~~~~~~a 225 (292)
T 1qqe_A 201 YFLKKGLCQLAATDAVAAARTLQEG 225 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHGG
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 2334778888999999888876654
No 75
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.60 E-value=3.8e-14 Score=157.65 Aligned_cols=159 Identities=18% Similarity=0.195 Sum_probs=97.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+.+|..|.+.|++++|+.+|+++++.+|.+..++..++.+|...|++++|+++|+++++..|++..++..+|.+|...|+
T Consensus 377 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 456 (597)
T 2xpi_A 377 LAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGN 456 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCC
Confidence 45566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCC-HHHHHHHHHHHHHhhcCCcHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI------DPDS-RNAGQNRLLAMNYINEGHDDK 154 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~------~P~~-~~a~~~~~la~~~~~~g~~~~ 154 (619)
+++|+++|+++++.+|+++.++..+|.+|...|++++|++.|+++++. +|++ ..++.. ++..+...|+.++
T Consensus 457 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~--l~~~~~~~g~~~~ 534 (597)
T 2xpi_A 457 ILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWAN--LGHAYRKLKMYDA 534 (597)
T ss_dssp HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHH--HHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHH--HHHHHHHhcCHHH
Confidence 666666666666666666666666666666666666666666666655 3332 223222 5555555566655
Q ss_pred HHHHHHHH
Q 007075 155 LFEAHRDW 162 (619)
Q Consensus 155 a~~~~~~~ 162 (619)
+.+.+++.
T Consensus 535 A~~~~~~~ 542 (597)
T 2xpi_A 535 AIDALNQG 542 (597)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 76
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.60 E-value=2.8e-14 Score=156.23 Aligned_cols=162 Identities=16% Similarity=0.171 Sum_probs=153.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+.+|..+...|++++|+.+|+++++.+|+ ..++..+|.++...|++++|+++|+++++.+|+++.++..+|.++...|+
T Consensus 247 ~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 325 (537)
T 3fp2_A 247 CYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQD 325 (537)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCC
Confidence 56789999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~ 161 (619)
+++|+..++++++.+|++..++.++|.++...|++++|+..|+++++.+|++..++.+ ++..+...|+++++.+.+++
T Consensus 326 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~--l~~~~~~~g~~~~A~~~~~~ 403 (537)
T 3fp2_A 326 YKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTF--FAEILTDRGDFDTAIKQYDI 403 (537)
T ss_dssp HHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHH--HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHH--HHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999888776 78888999999999988877
Q ss_pred HHHHH
Q 007075 162 WGKRF 166 (619)
Q Consensus 162 ~~~~~ 166 (619)
..+..
T Consensus 404 a~~~~ 408 (537)
T 3fp2_A 404 AKRLE 408 (537)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 65543
No 77
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.60 E-value=1.3e-14 Score=132.42 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=97.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++++|.++.+.|++++|+.+|++++.++|+++.+|+++|.++..+|++++|+++|+++++++|+++.+++++|.+|..+|
T Consensus 39 ~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg 118 (151)
T 3gyz_A 39 IYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLK 118 (151)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCH
Q 007075 81 KMDAAAEMIEKAIAANPTYA 100 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~ 100 (619)
++++|+.+|++++++.|+..
T Consensus 119 ~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 119 APLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp CHHHHHHHHHHHHHHCCCHH
T ss_pred CHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999865
No 78
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.60 E-value=7e-15 Score=160.31 Aligned_cols=171 Identities=12% Similarity=0.003 Sum_probs=135.4
Q ss_pred CCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEE-EcCCccCcHHHH
Q 007075 356 GFITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD-LLPLILLNHDHM 432 (619)
Q Consensus 356 ~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~-f~g~~~~~~~~~ 432 (619)
+.++|++++|+ .|..+.++++|..+.+ ++.+|+|+|.+ .+..++.+++.++++| ++|+ |.|. + .++..
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g--~~~~~~~l~~~~~~~~---~~v~~~~g~-~-~~~~~ 361 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAG--DPVLQEGFLAAAAEYP---GQVGVQIGY-H-EAFSH 361 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEE--CHHHHHHHHHHHHHST---TTEEEEESC-C-HHHHH
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCC--chHHHHHHHHHHHhCC---CcEEEeCCC-C-HHHHH
Confidence 66788888877 7999999999999876 58999999976 3457888888888875 6886 8887 3 45567
Q ss_pred HhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcC---------CCcccc--CCHHHHHHHH
Q 007075 433 QAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG---------LKHLIA--KNEDEYVQLA 500 (619)
Q Consensus 433 ~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~g---------l~~~v~--~~~~~y~~~a 500 (619)
.+|+.+||+|-|+.+ ++|++++|||+||+|||+.... |..-+..-| ..+++. .|++++++.+
T Consensus 362 ~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~g------g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i 435 (485)
T 2qzs_A 362 RIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTG------GLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAI 435 (485)
T ss_dssp HHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH------HHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHH
T ss_pred HHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCC------CccceeccCccccccccccceEEECCCCHHHHHHHH
Confidence 899999999999976 7799999999999999985431 222222223 455554 4899999999
Q ss_pred HHhh---cCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHH
Q 007075 501 LQLA---SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546 (619)
Q Consensus 501 ~~L~---~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~~ 546 (619)
.+++ .|++.+++++++.++ ..|+++.++++++++|+++...
T Consensus 436 ~~ll~~~~~~~~~~~~~~~~~~-----~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 436 RRAFVLWSRPSLWRFVQRQAMA-----MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHcCCHHHHHHHHHHHHh-----hcCCHHHHHHHHHHHHHHhhhh
Confidence 9998 799999888877653 4599999999999999998643
No 79
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.59 E-value=2.5e-14 Score=125.35 Aligned_cols=111 Identities=18% Similarity=0.202 Sum_probs=93.9
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 007075 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108 (619)
Q Consensus 29 p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~ 108 (619)
|..+..+..+|..+...|++++|+.+|+++++++|+++.++.++|.++..+|++++|+..++++++++|+++.+++++|.
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34567788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHH
Q 007075 109 LYRDAGSISLAIDAYEQCLKID------PDSRNAGQN 139 (619)
Q Consensus 109 ~~~~~g~~~eA~~~~~~al~~~------P~~~~a~~~ 139 (619)
++..+|++++|+..|+++++++ |++..+...
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~ 117 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQL 117 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHH
Confidence 8888888888888888888888 776655544
No 80
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.59 E-value=1.4e-14 Score=133.42 Aligned_cols=117 Identities=26% Similarity=0.362 Sum_probs=110.3
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 007075 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107 (619)
Q Consensus 28 ~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg 107 (619)
++..+..++.+|.++...|++++|+++|+++++++|++..+++++|.+|...|++++|+.+|+++++++|++..+++++|
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 45568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 007075 108 VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144 (619)
Q Consensus 108 ~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~ 144 (619)
.+|..+|++++|+.+|+++++++|++..++.+..+..
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~ 123 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLET 123 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 9999999999999999999999999988777754444
No 81
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.59 E-value=4.6e-15 Score=137.16 Aligned_cols=159 Identities=8% Similarity=0.069 Sum_probs=121.6
Q ss_pred CeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHh
Q 007075 357 FITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQA 434 (619)
Q Consensus 357 ~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~ 434 (619)
.++|+.++++ .|..+.++++|..+ ++.|+.+|+++|.+ +..+.+++.+++.|+ +|.| |.++ ..+...+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~~~l~i~G~g----~~~~~~~~~~~~~~~---~v~~-g~~~-~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQDIVLLLKGKG----PDEKKIKLLAQKLGV---KAEF-GFVN-SNELLEI 71 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGGEEEEEECCS----TTHHHHHHHHHHHTC---EEEC-CCCC-HHHHHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCCeEEEEEeCC----ccHHHHHHHHHHcCC---eEEE-eecC-HHHHHHH
Confidence 3578888887 69999999999886 55699999999976 456888889999988 7888 9998 7899999
Q ss_pred cccCcEeecCCCC-CCchhHHHhhhcCC-cEEecc-CCccccchhHHHHHhcCCCccccCCHHHHHHHHHHhhcCHHHHH
Q 007075 435 YSLMDISLDTFPY-AGTTTTCESLYMGV-PCVTMA-GSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALA 511 (619)
Q Consensus 435 ~~~~Dv~Ldt~~~-~g~~t~~eAl~~Gv-PvVt~~-g~~~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d~~~~~ 511 (619)
|+.+|+++.|+.+ ++|++++|||++|+ |||+.. +..... ++..-+ .-+...|++++++...++..|++.++
T Consensus 72 ~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~-----~~~~~~-~~~~~~~~~~l~~~i~~l~~~~~~~~ 145 (166)
T 3qhp_A 72 LKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQ-----FALDER-SLFEPNNAKDLSAKIDWWLENKLERE 145 (166)
T ss_dssp HTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGG-----GCSSGG-GEECTTCHHHHHHHHHHHHHCHHHHH
T ss_pred HHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhh-----hccCCc-eEEcCCCHHHHHHHHHHHHhCHHHHH
Confidence 9999999999976 77999999999996 999833 221111 111111 12334799999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCChHHHHH
Q 007075 512 NLRMSLRDLMSKSPVCDGQNFAL 534 (619)
Q Consensus 512 ~lr~~~r~~~~~~~~~~~~~~~~ 534 (619)
++++..++.. . .|+++.+++
T Consensus 146 ~~~~~~~~~~-~--~~s~~~~~~ 165 (166)
T 3qhp_A 146 RMQNEYAKSA-L--NYTLENSVI 165 (166)
T ss_dssp HHHHHHHHHH-H--HHC------
T ss_pred HHHHHHHHHH-H--HCChhhhhc
Confidence 9999988764 2 378877664
No 82
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.59 E-value=2.8e-14 Score=141.70 Aligned_cols=153 Identities=22% Similarity=0.222 Sum_probs=136.0
Q ss_pred HHcCCHHHHHHHHHHHHHhC----CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q 007075 9 GEMLKFDMAIVFYELAFHFN----PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA 84 (619)
Q Consensus 9 ~~~g~~~~A~~~~~~al~~~----p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~e 84 (619)
...|++++|+..|+++++.. |.++.+++.+|.++...|++++|+.+|+++++++|++..++.++|.++...|++++
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~ 95 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDA 95 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHH
T ss_pred CccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHH
Confidence 34578999999999999973 56788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 85 A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
|+.+|+++++.+|++..++.++|.++...|++++|+..|+++++++|++....... . .....|+.+++...+++...
T Consensus 96 A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~--~-~~~~~~~~~~A~~~~~~~~~ 172 (275)
T 1xnf_A 96 AYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWL--Y-LAEQKLDEKQAKEVLKQHFE 172 (275)
T ss_dssp HHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH--H-HHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHH--H-HHHHhcCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998654432 2 22455788888777765443
No 83
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.59 E-value=2.1e-14 Score=148.98 Aligned_cols=128 Identities=16% Similarity=0.167 Sum_probs=122.0
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHC---------------AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~ 65 (619)
++++|.+++..|++++|+.+|+++++++|++ ..+++++|.++..+|++++|+.+|+++++++|++
T Consensus 150 ~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 229 (336)
T 1p5q_A 150 VKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNN 229 (336)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 3689999999999999999999999999998 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH-HHHHHHHHH
Q 007075 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLA-IDAYEQCLK 128 (619)
Q Consensus 66 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA-~~~~~~al~ 128 (619)
..+++++|.+|..+|++++|+.+|+++++++|++..++.+++.++..+|++++| ...|++++.
T Consensus 230 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 230 EKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 556777664
No 84
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.59 E-value=2.7e-14 Score=125.16 Aligned_cols=112 Identities=14% Similarity=0.088 Sum_probs=107.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++++|..++..|++++|+.+|+++++.+|+++.++.++|.++..+|++++|+..|+++++++|++..+++++|.++..+|
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~ 86 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVK 86 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAAN------PTYAEAYNNLGVLYRD 112 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~------p~~~~a~~~Lg~~~~~ 112 (619)
++++|+..|+++++++ |++..++..++.+...
T Consensus 87 ~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 87 EYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 9999999999999999 9999999988887654
No 85
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.58 E-value=1.4e-14 Score=143.88 Aligned_cols=162 Identities=25% Similarity=0.334 Sum_probs=140.3
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHF--------NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI--------KPN 64 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l--------~p~ 64 (619)
++++|.++...|++++|+.+|+++++. .|....++.++|.++...|++++|+++|++++++ +|.
T Consensus 46 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 125 (283)
T 3edt_B 46 LNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD 125 (283)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 367999999999999999999999987 3666789999999999999999999999999998 467
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----
Q 007075 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA--------NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD---- 132 (619)
Q Consensus 65 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~---- 132 (619)
...++.++|.++...|++++|+.+++++++. .|....++.++|.++..+|++++|+.++++++++.+.
T Consensus 126 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~ 205 (283)
T 3edt_B 126 VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFG 205 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 7789999999999999999999999999999 7777889999999999999999999999999987221
Q ss_pred ------------------------------------------CH-HHHHHHHHHHHHhhcCCcHHHHHHHHHH
Q 007075 133 ------------------------------------------SR-NAGQNRLLAMNYINEGHDDKLFEAHRDW 162 (619)
Q Consensus 133 ------------------------------------------~~-~a~~~~~la~~~~~~g~~~~a~~~~~~~ 162 (619)
.+ .......++..|...|++++|.+.+++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 278 (283)
T 3edt_B 206 SVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCA 278 (283)
T ss_dssp SCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 11 1223344788888899998888877654
No 86
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.58 E-value=2.5e-14 Score=142.22 Aligned_cols=138 Identities=22% Similarity=0.232 Sum_probs=127.1
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHhhCCCCHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPH---CAEACNNLGVIYKD--------RDNLDKAVECYQMALSIKPNFSQSL 69 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~a~~~la~~~~~--------~g~~~~A~~~~~~al~l~p~~~~~~ 69 (619)
++.+|.++...|++++|+..|+++++.+|+ ...+++.+|.++.. .|++++|+..|+++++.+|++..+.
T Consensus 55 ~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 55 QFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 368999999999999999999999999875 47899999999999 9999999999999999999987655
Q ss_pred -----------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHc----------CCHHHH
Q 007075 70 -----------------NNLGVVYTVQGKMDAAAEMIEKAIAANPT---YAEAYNNLGVLYRDA----------GSISLA 119 (619)
Q Consensus 70 -----------------~~lg~~~~~~g~~~eA~~~~~~al~~~p~---~~~a~~~Lg~~~~~~----------g~~~eA 119 (619)
+++|.+|...|++++|+..|+++++.+|+ ...+++.+|.+|..+ |++++|
T Consensus 135 ~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A 214 (261)
T 3qky_A 135 DATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRA 214 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHH
Confidence 88999999999999999999999999998 567999999999987 999999
Q ss_pred HHHHHHHHHhCCCCHHHHH
Q 007075 120 IDAYEQCLKIDPDSRNAGQ 138 (619)
Q Consensus 120 ~~~~~~al~~~P~~~~a~~ 138 (619)
+..|+++++..|+++.+..
T Consensus 215 ~~~~~~~~~~~p~~~~~~~ 233 (261)
T 3qky_A 215 VELYERLLQIFPDSPLLRT 233 (261)
T ss_dssp HHHHHHHHHHCTTCTHHHH
T ss_pred HHHHHHHHHHCCCChHHHH
Confidence 9999999999999875443
No 87
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.57 E-value=1.1e-13 Score=153.88 Aligned_cols=161 Identities=13% Similarity=0.090 Sum_probs=130.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 007075 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKM 82 (619)
Q Consensus 3 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~ 82 (619)
.++.++...|++++|+..++++++..|++..++..+|.+|...|++++|+++|+++++++|++..++..+|.+|...|++
T Consensus 344 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 423 (597)
T 2xpi_A 344 LHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEH 423 (597)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 45555666666666666666666667777888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHH
Q 007075 83 DAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDW 162 (619)
Q Consensus 83 ~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~ 162 (619)
++|++.|+++++..|++..++..+|.+|...|++++|++.|+++++..|++..++.. ++..+...|+.+++.+.+++.
T Consensus 424 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~--l~~~~~~~g~~~~A~~~~~~~ 501 (597)
T 2xpi_A 424 DQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNE--LGVVAFNKSDMQTAINHFQNA 501 (597)
T ss_dssp HHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHH--HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHH--HHHHHHHhCCHHHHHHHHHHH
Confidence 888888888888888888888888888888888888888888888888888777665 677778888888888877766
Q ss_pred HHH
Q 007075 163 GKR 165 (619)
Q Consensus 163 ~~~ 165 (619)
.+.
T Consensus 502 ~~~ 504 (597)
T 2xpi_A 502 LLL 504 (597)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 88
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.57 E-value=2.1e-14 Score=145.86 Aligned_cols=137 Identities=16% Similarity=0.136 Sum_probs=118.0
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC------HH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHC------AEACNNLGVIYKDR-DNLDKAVECYQMALSIKPNF------SQ 67 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~la~~~~~~-g~~~~A~~~~~~al~l~p~~------~~ 67 (619)
|.++|.+|...|++++|+.+|++++++.+.. ..++.++|.+|... |++++|+.+|++++++.|.. ..
T Consensus 80 ~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~ 159 (292)
T 1qqe_A 80 YVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNK 159 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHH
Confidence 3689999999999999999999999987643 56899999999996 99999999999999998754 56
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 007075 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAE-------AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137 (619)
Q Consensus 68 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~-------a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~ 137 (619)
++.++|.++..+|++++|+.+|++++++.|++.. ++.++|.++..+|++++|+.+|+++++++|+.....
T Consensus 160 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 236 (292)
T 1qqe_A 160 CFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSR 236 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC--------
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcH
Confidence 7899999999999999999999999999987643 689999999999999999999999999999876644
No 89
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.56 E-value=9.8e-14 Score=141.85 Aligned_cols=161 Identities=14% Similarity=0.013 Sum_probs=142.5
Q ss_pred CHHHHHHHH-------HcCCH-------HHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 007075 1 MYNLGVAYG-------EMLKF-------DMAIVFYELAFH-FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65 (619)
Q Consensus 1 ~~~lg~~~~-------~~g~~-------~~A~~~~~~al~-~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~ 65 (619)
|+++|..+. ..|++ ++|+..|+++++ ++|++..+|.++|.++...|++++|.+.|+++++++|.+
T Consensus 53 w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (308)
T 2ond_A 53 WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDID 132 (308)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSC
T ss_pred HHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccC
Confidence 345666665 35886 999999999999 799999999999999999999999999999999999999
Q ss_pred HH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 007075 66 SQ-SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD-AGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143 (619)
Q Consensus 66 ~~-~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~-~g~~~eA~~~~~~al~~~P~~~~a~~~~~la 143 (619)
.. +|.++|.++...|++++|+..|+++++..|....++...+.+... .|++++|+..|+++++.+|++..++.+ ++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--~~ 210 (308)
T 2ond_A 133 PTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLA--YI 210 (308)
T ss_dssp THHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHH--HH
T ss_pred ccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH--HH
Confidence 87 999999999999999999999999999999998888877766544 799999999999999999999888876 66
Q ss_pred HHHhhcCCcHHHHHHHHHHH
Q 007075 144 MNYINEGHDDKLFEAHRDWG 163 (619)
Q Consensus 144 ~~~~~~g~~~~a~~~~~~~~ 163 (619)
..+...|+.+++...+++..
T Consensus 211 ~~~~~~g~~~~A~~~~~~al 230 (308)
T 2ond_A 211 DYLSHLNEDNNTRVLFERVL 230 (308)
T ss_dssp HHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHH
Confidence 77788899998888777553
No 90
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.56 E-value=1.9e-13 Score=124.76 Aligned_cols=129 Identities=18% Similarity=0.181 Sum_probs=121.0
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|+++++.+|.+..++.++|.++...|++++|+.+++++++++|++..++.++|.++...|
T Consensus 16 ~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~ 95 (166)
T 1a17_A 16 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALG 95 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHcCCHHHHHHHHHHHHHh
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVL--YRDAGSISLAIDAYEQCLKI 129 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~--~~~~g~~~eA~~~~~~al~~ 129 (619)
++++|+.+++++++.+|++..++..++.+ +...|++++|+..++++..+
T Consensus 96 ~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 96 KFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 99999999999999999999988555554 88899999999999887654
No 91
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.56 E-value=9.1e-14 Score=141.18 Aligned_cols=136 Identities=14% Similarity=0.028 Sum_probs=123.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH--HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLG--VIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la--~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 79 (619)
..+|.++..+|++++|+..|+++++.+|++.......+ .++...|++++|+.+|+++++.+|+++.+++++|.++..+
T Consensus 134 ~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~ 213 (291)
T 3mkr_A 134 AMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQ 213 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999865444333 3344568999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHhCCCCHHHH
Q 007075 80 GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISL-AIDAYEQCLKIDPDSRNAG 137 (619)
Q Consensus 80 g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~e-A~~~~~~al~~~P~~~~a~ 137 (619)
|++++|+..|+++++++|+++.++.++|.++..+|+.++ +.++++++++++|+++.+.
T Consensus 214 g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~ 272 (291)
T 3mkr_A 214 GRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIK 272 (291)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999999999999999999999986 5689999999999998654
No 92
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.56 E-value=4.7e-14 Score=134.50 Aligned_cols=156 Identities=13% Similarity=0.124 Sum_probs=126.0
Q ss_pred CCCCCCeEEEecCCC---CcCCHHHHHHHHHHH--HHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEE-cCCc
Q 007075 352 ALTNGFITFGSFNNL---AKITPKVLQVWARIL--CAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDL-LPLI 425 (619)
Q Consensus 352 ~l~~~~~~f~~~~~~---~K~~~~~~~~~~~il--~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f-~g~~ 425 (619)
+++++. +|++++++ .|..+.++++|..+. ++.|+.+|+++|.+ .+...+.+++.+++.| +|+| .|.+
T Consensus 32 ~~~~~~-~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~--~~~~~~~l~~~~~~~~----~v~~~~g~~ 104 (200)
T 2bfw_A 32 GMDEGV-TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG--DPELEGWARSLEEKHG----NVKVITEML 104 (200)
T ss_dssp TCCSCE-EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCB--CHHHHHHHHHHHHHCT----TEEEECSCC
T ss_pred CCCCCC-EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCC--ChHHHHHHHHHHHhcC----CEEEEeccC
Confidence 444444 67777775 599999999999998 88899999999976 2237788888888887 8999 9999
Q ss_pred cCcHHHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccC--CHHHHHHHHHH
Q 007075 426 LLNHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK--NEDEYVQLALQ 502 (619)
Q Consensus 426 ~~~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~--~~~~y~~~a~~ 502 (619)
+ ..++..+|+.+|++|.|+.+ ++|++++|||++|+|||+..... ...++ -|-.+++.. |.+++++...+
T Consensus 105 ~-~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~-----~~e~~--~~~~g~~~~~~~~~~l~~~i~~ 176 (200)
T 2bfw_A 105 S-REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG-----LRDII--TNETGILVKAGDPGELANAILK 176 (200)
T ss_dssp C-HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH-----HHHHC--CTTTCEEECTTCHHHHHHHHHH
T ss_pred C-HHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCC-----hHHHc--CCCceEEecCCCHHHHHHHHHH
Confidence 7 68999999999999999977 66999999999999999854320 11222 355556654 99999999999
Q ss_pred hhc-CHHHHHHHHHHHHHHhh
Q 007075 503 LAS-DVTALANLRMSLRDLMS 522 (619)
Q Consensus 503 L~~-d~~~~~~lr~~~r~~~~ 522 (619)
++. |++.++++++..++...
T Consensus 177 l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 177 ALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp HHHCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHH
Confidence 999 99999999998887653
No 93
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.55 E-value=3.9e-14 Score=153.94 Aligned_cols=161 Identities=17% Similarity=0.159 Sum_probs=121.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+.+|.++...|++++|+..|+++++.+|.+..++..+|.++...|++++|+.+++++++.+|++..++.++|.++...|+
T Consensus 308 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 387 (514)
T 2gw1_A 308 YHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKND 387 (514)
T ss_dssp HHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCC
Confidence 45677777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCc
Q 007075 82 MDAAAEMIEKAIAANPTYAE------AYNNLGVLYRD---AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHD 152 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~------a~~~Lg~~~~~---~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~ 152 (619)
+++|+.+++++++..|++.. ++.++|.++.. .|++++|+..|+++++.+|++..++.. ++..+...|++
T Consensus 388 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~--la~~~~~~g~~ 465 (514)
T 2gw1_A 388 FDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIG--LAQMKLQQEDI 465 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHH--HHHHHHHhcCH
Confidence 77777777777777777644 77777777777 777777777777777777777766555 66677777777
Q ss_pred HHHHHHHHHHHH
Q 007075 153 DKLFEAHRDWGK 164 (619)
Q Consensus 153 ~~a~~~~~~~~~ 164 (619)
+++.+.+++..+
T Consensus 466 ~~A~~~~~~a~~ 477 (514)
T 2gw1_A 466 DEAITLFEESAD 477 (514)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777766655433
No 94
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.55 E-value=5.2e-13 Score=133.31 Aligned_cols=153 Identities=24% Similarity=0.338 Sum_probs=137.1
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD----RDNLDKAVECYQMALSIKPNFSQSLNNLGVVY 76 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~----~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 76 (619)
++.+|..+...|++++|+.+|+++++ +++..+++++|.++.. .+++++|+++|+++++.+ ++.+++++|.+|
T Consensus 9 ~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~ 84 (273)
T 1ouv_A 9 LVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLY 84 (273)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH
Confidence 36799999999999999999999998 7888999999999999 999999999999999985 889999999999
Q ss_pred HH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 007075 77 TV----QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD----AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYIN 148 (619)
Q Consensus 77 ~~----~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~----~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~ 148 (619)
.. .+++++|+.+|+++++.+ ++.+++++|.+|.. .+++++|+.+|+++++.+ +..+..+ ++..|..
T Consensus 85 ~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~--lg~~~~~ 158 (273)
T 1ouv_A 85 YSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTI--LGSLYDA 158 (273)
T ss_dssp HHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHH--HHHHHHH
T ss_pred hCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHH--HHHHHHc
Confidence 99 999999999999999984 89999999999999 999999999999999976 4566555 6777776
Q ss_pred ----cCCcHHHHHHHHHHH
Q 007075 149 ----EGHDDKLFEAHRDWG 163 (619)
Q Consensus 149 ----~g~~~~a~~~~~~~~ 163 (619)
.++++++.+.+++..
T Consensus 159 ~~~~~~~~~~A~~~~~~a~ 177 (273)
T 1ouv_A 159 GRGTPKDLKKALASYDKAC 177 (273)
T ss_dssp TSSSCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHH
Confidence 788888888776644
No 95
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.55 E-value=4.8e-14 Score=153.65 Aligned_cols=168 Identities=13% Similarity=-0.023 Sum_probs=134.0
Q ss_pred CeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEE-EcCCccCcHHHHH
Q 007075 357 FITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVD-LLPLILLNHDHMQ 433 (619)
Q Consensus 357 ~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~-f~g~~~~~~~~~~ 433 (619)
.++|++++|+ .|..+.++++|..+.+ ++.+|+|+|.+ .+..++.+++.++++| ++|+ |.|. + .++...
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g--~~~~~~~l~~~~~~~~---~~v~~~~g~-~-~~~~~~ 361 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAG--DVALEGALLAAASRHH---GRVGVAIGY-N-EPLSHL 361 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECB--CHHHHHHHHHHHHHTT---TTEEEEESC-C-HHHHHH
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHh--cCceEEEEeCC--chHHHHHHHHHHHhCC---CcEEEecCC-C-HHHHHH
Confidence 5588899988 6999999999999876 59999999976 4457888888888875 6887 7887 3 455578
Q ss_pred hcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcC---------CCcccc--CCHHHHHHHHH
Q 007075 434 AYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVG---------LKHLIA--KNEDEYVQLAL 501 (619)
Q Consensus 434 ~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~g---------l~~~v~--~~~~~y~~~a~ 501 (619)
+|+.+|+++-|+.+ ++|++++|||+||+|||+.... |..-+..-| ..+++. .|++++++...
T Consensus 362 ~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~g------g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~ 435 (485)
T 1rzu_A 362 MQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG------GLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIR 435 (485)
T ss_dssp HHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH------HHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHH
T ss_pred HHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCC------ChhheecccccccccccCCcceEeCCCCHHHHHHHHH
Confidence 99999999999976 7799999999999999985431 222222223 455554 48999999999
Q ss_pred Hhh---cCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHH
Q 007075 502 QLA---SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544 (619)
Q Consensus 502 ~L~---~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~ 544 (619)
+++ .|++.+++++++.++ ..|+++.++++++++|+++.
T Consensus 436 ~ll~~~~~~~~~~~~~~~~~~-----~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 436 RTVRYYHDPKLWTQMQKLGMK-----SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp HHHHHHTCHHHHHHHHHHHHT-----CCCBHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCHHHHHHHHHHHHH-----HhCChHHHHHHHHHHHHHhh
Confidence 998 899998888877652 46999999999999999875
No 96
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.55 E-value=1.2e-13 Score=120.12 Aligned_cols=122 Identities=24% Similarity=0.381 Sum_probs=92.4
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 007075 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107 (619)
Q Consensus 28 ~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg 107 (619)
+|.+..++..+|.++...|++++|+.+|+++++.+|++..++..+|.++...|++++|+.+++++++.+|++..++..+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 44556677777888888888888888888888877777777788888888888888888888888888887777788888
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCC
Q 007075 108 VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151 (619)
Q Consensus 108 ~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~ 151 (619)
.++...|++++|+.+|+++++++|++..++.. ++.++...|+
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~--l~~~~~~~~~ 129 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDNETYKSN--LKIAELKLRE 129 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH--HHHHHHHHTT
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccchHHHHH--HHHHHHHHhc
Confidence 88888888888888888888887777766655 4555555544
No 97
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.55 E-value=5.1e-14 Score=129.61 Aligned_cols=110 Identities=22% Similarity=0.237 Sum_probs=105.1
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|.+++..|++++|+.+|+++++++|++..+++++|.+|..+|++++|+.+|+++++++|++..+++++|.++..+|
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 93 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMA 93 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~ 110 (619)
++++|+.+|+++++++|++..++++++...
T Consensus 94 ~~~~A~~~~~~al~~~p~~~~~~~~~~l~~ 123 (164)
T 3sz7_A 94 DYKGAKEAYEKGIEAEGNGGSDAMKRGLET 123 (164)
T ss_dssp CHHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 999999999999999999998887776553
No 98
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.55 E-value=5.4e-14 Score=123.16 Aligned_cols=121 Identities=20% Similarity=0.296 Sum_probs=99.6
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 007075 28 NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLG 107 (619)
Q Consensus 28 ~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg 107 (619)
.|....+++.+|.++...|++++|+++|+++++.+|++..++.++|.++...|++++|+.+++++++.+|++..+++++|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 45667888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 007075 108 VLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150 (619)
Q Consensus 108 ~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g 150 (619)
.++..+|++++|+.+|+++++++|++..++.. ++..+...|
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~--l~~~~~~~~ 132 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALDLDSSCKEAADG--YQRCMMAQY 132 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHH--HHHHHHHHT
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCchHHHHH--HHHHHHHhc
Confidence 88888888888888888888888887776665 455554443
No 99
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.55 E-value=6.1e-14 Score=153.57 Aligned_cols=130 Identities=19% Similarity=0.278 Sum_probs=76.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+.+|.++...|++++|+.+|+++++.+|+++.++..+|.++...|++++|++.|+++++++|++..++.++|.++...|+
T Consensus 280 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~ 359 (537)
T 3fp2_A 280 IFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGK 359 (537)
T ss_dssp HHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 34555555556666666666666666666566666666666666666666666666666666555556666666666666
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P 131 (619)
+++|+.+++++++.+|+++.++.++|.++...|++++|+..|+++++..|
T Consensus 360 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 409 (537)
T 3fp2_A 360 FTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEE 409 (537)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCC
Confidence 66666666666666665555555555555555555555555555555444
No 100
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.54 E-value=5.8e-14 Score=152.56 Aligned_cols=161 Identities=15% Similarity=0.083 Sum_probs=153.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+.+|.++...|++++|+.+|+++++.+|. ..++..+|.++...|++++|+..++++++.+|++..++..+|.++...|+
T Consensus 241 ~~~~~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 319 (514)
T 2gw1_A 241 EHTGIFKFLKNDPLGAHEDIKKAIELFPR-VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQN 319 (514)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcc-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCC
Confidence 57899999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~ 161 (619)
+++|+..++++++.+|++..++..+|.++...|++++|+..|+++++..|++..++.+ ++..+...|+++++.+.+++
T Consensus 320 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~--la~~~~~~~~~~~A~~~~~~ 397 (514)
T 2gw1_A 320 YDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNF--FAEILTDKNDFDKALKQYDL 397 (514)
T ss_dssp TTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHH--HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHH--HHHHHHHCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999887776 78888999999999888877
Q ss_pred HHHH
Q 007075 162 WGKR 165 (619)
Q Consensus 162 ~~~~ 165 (619)
..+.
T Consensus 398 a~~~ 401 (514)
T 2gw1_A 398 AIEL 401 (514)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6554
No 101
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.54 E-value=4.5e-14 Score=128.22 Aligned_cols=104 Identities=12% Similarity=0.068 Sum_probs=99.4
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++++|..+...|++++|+..|++++..+|+++.+++++|.++...|++++|+++|+++++++|+++.+++++|.++..+|
T Consensus 24 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 103 (148)
T 2vgx_A 24 LYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXG 103 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYN 104 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~ 104 (619)
++++|+.+|+++++++|+++....
T Consensus 104 ~~~~A~~~~~~al~~~p~~~~~~~ 127 (148)
T 2vgx_A 104 ELAEAESGLFLAQELIANXPEFXE 127 (148)
T ss_dssp CHHHHHHHHHHHHHHHTTCGGGHH
T ss_pred CHHHHHHHHHHHHHHCcCCCcchH
Confidence 999999999999999998776543
No 102
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.54 E-value=5.3e-14 Score=126.41 Aligned_cols=110 Identities=15% Similarity=0.067 Sum_probs=102.8
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+..|++++..+|+++.+|+++|.++...|++++|+.+|+++++++|+++.+++++|.++..+|
T Consensus 21 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 100 (142)
T 2xcb_A 21 LYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLG 100 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~ 110 (619)
++++|+.+|+++++++|+++........+.
T Consensus 101 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 130 (142)
T 2xcb_A 101 DLDGAESGFYSARALAAAQPAHEALAARAG 130 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTCGGGHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 999999999999999998876655544443
No 103
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.53 E-value=2.4e-13 Score=138.97 Aligned_cols=163 Identities=7% Similarity=-0.008 Sum_probs=142.2
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAE-ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV- 78 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~- 78 (619)
|+++|..+...|++++|...|+++++.+|.+.. +|.++|.++...|++++|...|+++++.+|.....+...+.+...
T Consensus 102 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~ 181 (308)
T 2ond_A 102 YFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYC 181 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999887 999999999999999999999999999999998888877766544
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCC-CHHHHHHHHHHHHHhhcCCcHH
Q 007075 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI---DPD-SRNAGQNRLLAMNYINEGHDDK 154 (619)
Q Consensus 79 ~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~---~P~-~~~a~~~~~la~~~~~~g~~~~ 154 (619)
.|++++|+.+|+++++.+|+++.+|.++|.++..+|++++|+..|+++++. .|+ ....+.. ++..+...|+.++
T Consensus 182 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~--~~~~~~~~g~~~~ 259 (308)
T 2ond_A 182 SKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWAR--FLAFESNIGDLAS 259 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHH--HHHHHHHHSCHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHH--HHHHHHHcCCHHH
Confidence 799999999999999999999999999999999999999999999999996 453 5555554 4555667888888
Q ss_pred HHHHHHHHHHH
Q 007075 155 LFEAHRDWGKR 165 (619)
Q Consensus 155 a~~~~~~~~~~ 165 (619)
+...+++..+.
T Consensus 260 a~~~~~~a~~~ 270 (308)
T 2ond_A 260 ILKVEKRRFTA 270 (308)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 87766655444
No 104
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.53 E-value=6.9e-14 Score=141.21 Aligned_cols=164 Identities=26% Similarity=0.432 Sum_probs=143.7
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHF--------NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI--------KPN 64 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l--------~p~ 64 (619)
++.+|.++...|++++|+.+|++++++ .|....++..+|.++...|++++|+.++++++++ .|.
T Consensus 30 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 109 (311)
T 3nf1_A 30 LHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA 109 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH
Confidence 367899999999999999999999995 6777889999999999999999999999999987 356
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------
Q 007075 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN--------PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI------- 129 (619)
Q Consensus 65 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--------p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~------- 129 (619)
...++.++|.++...|++++|+.++++++++. |....++.++|.++...|++++|+.+|++++++
T Consensus 110 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 189 (311)
T 3nf1_A 110 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGP 189 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCC
Confidence 67789999999999999999999999999884 556778999999999999999999999999998
Q ss_pred -CCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 130 -DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 130 -~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
.|....++ ..++..|...|+++++.+.+++..+..
T Consensus 190 ~~~~~~~~~--~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 190 DDPNVAKTK--NNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp TCHHHHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 44333333 448889999999999998888776554
No 105
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.53 E-value=1.6e-13 Score=120.09 Aligned_cols=115 Identities=16% Similarity=0.176 Sum_probs=111.4
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|+++++.+|++..+++++|.++...|++++|+++++++++++|++..++.++|.++...|
T Consensus 19 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~ 98 (133)
T 2lni_A 19 VKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMK 98 (133)
T ss_dssp HHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~ 115 (619)
++++|+.+++++++.+|++..++..++.++..+|+
T Consensus 99 ~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 99 DYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp CHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999988774
No 106
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.53 E-value=9.4e-14 Score=122.57 Aligned_cols=102 Identities=25% Similarity=0.328 Sum_probs=91.0
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHH
Q 007075 31 CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY-------AEAY 103 (619)
Q Consensus 31 ~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~-------~~a~ 103 (619)
.+.++.++|..++..|++++|+++|+++++++|+++.++.++|.+|..+|++++|+..++++++++|++ ..++
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 356788899999999999999999999999999999999999999999999999999999999988765 3578
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 007075 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPD 132 (619)
Q Consensus 104 ~~Lg~~~~~~g~~~eA~~~~~~al~~~P~ 132 (619)
.++|.++..+|++++|+++|+++++..|+
T Consensus 87 ~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 88999999999999999999999998886
No 107
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.53 E-value=2.3e-14 Score=134.33 Aligned_cols=150 Identities=12% Similarity=0.003 Sum_probs=113.3
Q ss_pred CCCCCCCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHH--HcCCCCCcEEEcCCcc
Q 007075 351 PALTNGFITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLE--QLGLESLRVDLLPLIL 426 (619)
Q Consensus 351 ~~l~~~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~--~~Gi~~~rv~f~g~~~ 426 (619)
..++++..+|++++++ .|..+.+++++.++ |+.+|+++|.+.. .+.+++.+. ..|+. ++|+|.|.++
T Consensus 17 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~----~~~l~~~~~~~~~~l~-~~v~~~g~~~ 87 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSK----GDHAERYARKIMKIAP-DNVKFLGSVS 87 (177)
T ss_dssp CCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCT----TSTHHHHHHHHHHHSC-TTEEEEESCC
T ss_pred cccCCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCcc----HHHHHHHHHhhhcccC-CcEEEeCCCC
Confidence 3456666778888887 68888888877664 8999999997632 246666777 77887 8999999998
Q ss_pred CcHHHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccc-cCCHHHHHHHHHHhh
Q 007075 427 LNHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLI-AKNEDEYVQLALQLA 504 (619)
Q Consensus 427 ~~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v-~~~~~~y~~~a~~L~ 504 (619)
..+...+|+.+|+++.|+.. ++|++++|||++|+|||+.... +..-+..-|..+++ ..|.+++++.+.+++
T Consensus 88 -~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~------~~~e~i~~~~~g~~~~~d~~~l~~~i~~l~ 160 (177)
T 2f9f_A 88 -EEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEG------GFKETVINEKTGYLVNADVNEIIDAMKKVS 160 (177)
T ss_dssp -HHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSH------HHHHHCCBTTTEEEECSCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCC------CHHHHhcCCCccEEeCCCHHHHHHHHHHHH
Confidence 57899999999999997755 7799999999999999985432 11112122444444 589999999999999
Q ss_pred cCHHH-HHHHHHH
Q 007075 505 SDVTA-LANLRMS 516 (619)
Q Consensus 505 ~d~~~-~~~lr~~ 516 (619)
.|++. ++++|+.
T Consensus 161 ~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 161 KNPDKFKKDCFRR 173 (177)
T ss_dssp HCTTTTHHHHHHH
T ss_pred hCHHHHHHHHHHH
Confidence 99875 4444443
No 108
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.53 E-value=6.5e-14 Score=141.36 Aligned_cols=164 Identities=24% Similarity=0.328 Sum_probs=140.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHF--------NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK--------PNF 65 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~--------p~~ 65 (619)
+.+|.++...|++++|+.+|++++.. .|....++.++|.++...|++++|++++++++++. |..
T Consensus 73 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 152 (311)
T 3nf1_A 73 NILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDV 152 (311)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHH
Confidence 57899999999999999999999987 35667899999999999999999999999999884 556
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----
Q 007075 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAA--------NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD----- 132 (619)
Q Consensus 66 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~----- 132 (619)
..++.++|.++...|++++|+.+++++++. .|....++.++|.+|..+|++++|+.+|+++++..|.
T Consensus 153 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 232 (311)
T 3nf1_A 153 AKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGS 232 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 678999999999999999999999999998 6777889999999999999999999999999985321
Q ss_pred ------------------------------------------CHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 007075 133 ------------------------------------------SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165 (619)
Q Consensus 133 ------------------------------------------~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~ 165 (619)
.........++..|...|++++|.+.+++..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l 307 (311)
T 3nf1_A 233 VDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRS 307 (311)
T ss_dssp -----CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 111222334788889999999998887765443
No 109
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.52 E-value=1.5e-13 Score=132.12 Aligned_cols=118 Identities=14% Similarity=0.164 Sum_probs=110.3
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHH----------------HHHHHHHcCCHHHHHHHHHHHHH
Q 007075 31 CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNN----------------LGVVYTVQGKMDAAAEMIEKAIA 94 (619)
Q Consensus 31 ~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~----------------lg~~~~~~g~~~eA~~~~~~al~ 94 (619)
+.+.++..|..+...|++++|+.+|+++++++|+++.+++. +|.++...|++++|+..|+++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 56778899999999999999999999999999999999999 99999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 007075 95 ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150 (619)
Q Consensus 95 ~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g 150 (619)
++|+++.+++++|.++..+|++++|+..|+++++++|++..++.+ ++..|...+
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~--lg~~~~~~~ 136 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIF--LGNYYYLTA 136 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHH--HHHHHHHHh
Confidence 999999999999999999999999999999999999999999888 555554433
No 110
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.52 E-value=5.8e-14 Score=127.51 Aligned_cols=105 Identities=12% Similarity=0.079 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHHh----
Q 007075 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPN-------FSQ-----SLNNLGVVYTVQGKMDAAAEMIEKAIAA---- 95 (619)
Q Consensus 32 ~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~-------~~~-----~~~~lg~~~~~~g~~~eA~~~~~~al~~---- 95 (619)
+..+.++|..++..|++++|+.+|+++++++|+ +.. +|.++|.++..+|++++|+.+|++++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 456788888888999999999999999999888 443 8999999999999999999999999999
Q ss_pred ---CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 007075 96 ---NPTYAEAY----NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136 (619)
Q Consensus 96 ---~p~~~~a~----~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a 136 (619)
+|++..+| +++|.++..+|++++|+..|+++++++|++...
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~ 138 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGE 138 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSC
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHH
Confidence 99999999 999999999999999999999999999987543
No 111
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.52 E-value=1.3e-13 Score=121.55 Aligned_cols=104 Identities=17% Similarity=0.311 Sum_probs=95.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHHHHHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF-------SQSLNNLGV 74 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~-------~~~~~~lg~ 74 (619)
.++|..+++.|+|++|+.+|+++++++|+++.++.++|.+|..+|++++|++.++++++++|++ ..++.++|.
T Consensus 12 ~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~ 91 (127)
T 4gcn_A 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGN 91 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999998765 358899999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 007075 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106 (619)
Q Consensus 75 ~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~L 106 (619)
++..+|++++|+.+|+++++..|+ ++....+
T Consensus 92 ~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l 122 (127)
T 4gcn_A 92 AFQKQNDLSLAVQWFHRSLSEFRD-PELVKKV 122 (127)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHH
Confidence 999999999999999999999886 5544433
No 112
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.52 E-value=9.3e-14 Score=121.51 Aligned_cols=101 Identities=16% Similarity=0.155 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 007075 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA 113 (619)
Q Consensus 34 a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~ 113 (619)
.++.+|..+...|++++|+..|+++++++|+++.+++++|.++...|++++|+.+|+++++++|+++.+++++|.++..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCH
Q 007075 114 GSISLAIDAYEQCLKIDPDSR 134 (619)
Q Consensus 114 g~~~eA~~~~~~al~~~P~~~ 134 (619)
|++++|+..|+++++++|++.
T Consensus 99 g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHHHHhCcCCC
Confidence 999999999999999999764
No 113
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.51 E-value=2.6e-14 Score=135.96 Aligned_cols=143 Identities=13% Similarity=0.134 Sum_probs=118.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH----------------H
Q 007075 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS----------------Q 67 (619)
Q Consensus 4 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~----------------~ 67 (619)
.+......|++++|.+.++......+.....+..+|..+...|++++|+.+|++++++.|.++ .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 89 (198)
T 2fbn_A 10 HSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEIS 89 (198)
T ss_dssp ------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHH
Confidence 345566678888888888777776777788999999999999999999999999999999887 8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 007075 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147 (619)
Q Consensus 68 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~ 147 (619)
++.++|.++...|++++|+.+++++++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++.. ++.++.
T Consensus 90 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--l~~~~~ 167 (198)
T 2fbn_A 90 CNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNS--YELCVN 167 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHH--HHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999888776 444443
Q ss_pred h
Q 007075 148 N 148 (619)
Q Consensus 148 ~ 148 (619)
.
T Consensus 168 ~ 168 (198)
T 2fbn_A 168 K 168 (198)
T ss_dssp H
T ss_pred H
Confidence 3
No 114
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.51 E-value=3.1e-13 Score=117.44 Aligned_cols=116 Identities=22% Similarity=0.291 Sum_probs=112.5
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|++++..+|++..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|
T Consensus 15 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (131)
T 2vyi_A 15 LKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 94 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSI 116 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~ 116 (619)
++++|+.+++++++.+|++..++..+|.++..+|++
T Consensus 95 ~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 95 KHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999875
No 115
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.51 E-value=1.6e-12 Score=129.69 Aligned_cols=153 Identities=23% Similarity=0.367 Sum_probs=137.4
Q ss_pred CHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 007075 1 MYNLGVAYGE----MLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD----RDNLDKAVECYQMALSIKPNFSQSLNNL 72 (619)
Q Consensus 1 ~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~----~g~~~~A~~~~~~al~l~p~~~~~~~~l 72 (619)
++++|.++.. .+++++|+.+|+++++.+ ++.+++++|.+|.. .+++++|+++|+++++. +++.++.++
T Consensus 41 ~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~l 116 (273)
T 1ouv_A 41 CFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KYAEGCASL 116 (273)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CCccHHHHH
Confidence 3689999999 999999999999999885 79999999999999 99999999999999997 488999999
Q ss_pred HHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 007075 73 GVVYTV----QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD----AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAM 144 (619)
Q Consensus 73 g~~~~~----~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~----~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~ 144 (619)
|.+|.. .+++++|+.+|+++++.+ +..+++++|.+|.. .+++++|+.+|+++++.. +..+..+ ++.
T Consensus 117 g~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~--lg~ 190 (273)
T 1ouv_A 117 GGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK--DSPGCFN--AGN 190 (273)
T ss_dssp HHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH--HHH
T ss_pred HHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHHHH--HHH
Confidence 999999 999999999999999976 68899999999999 999999999999999874 4566555 778
Q ss_pred HHhh----cCCcHHHHHHHHHHH
Q 007075 145 NYIN----EGHDDKLFEAHRDWG 163 (619)
Q Consensus 145 ~~~~----~g~~~~a~~~~~~~~ 163 (619)
.|.. .++++++.+.+++..
T Consensus 191 ~~~~g~~~~~~~~~A~~~~~~a~ 213 (273)
T 1ouv_A 191 MYHHGEGATKNFKEALARYSKAC 213 (273)
T ss_dssp HHHHTCSSCCCHHHHHHHHHHHH
T ss_pred HHHcCCCCCccHHHHHHHHHHHH
Confidence 8888 889988888776543
No 116
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.51 E-value=1.4e-13 Score=130.77 Aligned_cols=126 Identities=22% Similarity=0.237 Sum_probs=113.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCA----------------EACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~----------------~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~ 65 (619)
+.+|..++..|+|++|+.+|++++++.|.++ .++.++|.++...|++++|+.+++++++++|++
T Consensus 42 ~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 121 (198)
T 2fbn_A 42 KEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN 121 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc
Confidence 5789999999999999999999999998887 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHH
Q 007075 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI-DAYEQCL 127 (619)
Q Consensus 66 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~-~~~~~al 127 (619)
..+++++|.++..+|++++|+.+|+++++++|++..++..++.++..+++..++. ..|.+.+
T Consensus 122 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 122 VKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMF 184 (198)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC----------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998888877 4444444
No 117
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.51 E-value=1.2e-13 Score=145.35 Aligned_cols=162 Identities=15% Similarity=0.079 Sum_probs=138.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh---CCC---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-------CHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHF---NPH---CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN-------FSQS 68 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~---~p~---~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~-------~~~~ 68 (619)
+.+|..+...|++++|+.+|++++++ .++ .+.+++++|.++...|++++|+.++++|+++.+. ...+
T Consensus 107 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 186 (383)
T 3ulq_A 107 FFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQC 186 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 45899999999999999999999987 233 5689999999999999999999999999998443 3458
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----C-CCCHHH
Q 007075 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTY------AEAYNNLGVLYRDAGSISLAIDAYEQCLKI-----D-PDSRNA 136 (619)
Q Consensus 69 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-----~-P~~~~a 136 (619)
+.++|.++..+|++++|+.++++++++.+.. ..++.++|.+|..+|++++|+.+|++++++ + |....+
T Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 266 (383)
T 3ulq_A 187 HSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQA 266 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHH
Confidence 9999999999999999999999999886543 358999999999999999999999999994 4 554444
Q ss_pred HHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 007075 137 GQNRLLAMNYINEGHDDKLFEAHRDWGKR 165 (619)
Q Consensus 137 ~~~~~la~~~~~~g~~~~a~~~~~~~~~~ 165 (619)
+.+ ++.+|...|++++|.+.+++..+.
T Consensus 267 ~~~--l~~~~~~~g~~~~A~~~~~~al~~ 293 (383)
T 3ulq_A 267 YFL--ITQIHYKLGKIDKAHEYHSKGMAY 293 (383)
T ss_dssp HHH--HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHH--HHHHHHHCCCHHHHHHHHHHHHHH
Confidence 444 889999999999998888776554
No 118
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.51 E-value=8e-14 Score=121.96 Aligned_cols=100 Identities=18% Similarity=0.227 Sum_probs=91.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+.+|..+...|++++|+..|+++++.+|+++.+++.+|.++...|++++|+.+|+++++++|++..++.++|.++...|+
T Consensus 21 ~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~ 100 (121)
T 1hxi_A 21 MEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHN 100 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHH
Q 007075 82 MDAAAEMIEKAIAANPTYAE 101 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~ 101 (619)
+++|+..|+++++++|++..
T Consensus 101 ~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 101 ANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999998653
No 119
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.51 E-value=2.4e-13 Score=132.31 Aligned_cols=134 Identities=15% Similarity=0.114 Sum_probs=122.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH---HHHHHHHHHHH------------------cCCHHHHHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAE---ACNNLGVIYKD------------------RDNLDKAVECYQMAL 59 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~---a~~~la~~~~~------------------~g~~~~A~~~~~~al 59 (619)
++.+|.++...|++++|+..|+++++.+|++.. +++.+|.++.. .|++++|+..|++++
T Consensus 44 ~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l 123 (225)
T 2yhc_A 44 QLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLV 123 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHH
Confidence 367899999999999999999999999998864 89999999876 579999999999999
Q ss_pred hhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCHHHH
Q 007075 60 SIKPNFSQSL-----------------NNLGVVYTVQGKMDAAAEMIEKAIAANPTYA---EAYNNLGVLYRDAGSISLA 119 (619)
Q Consensus 60 ~l~p~~~~~~-----------------~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~---~a~~~Lg~~~~~~g~~~eA 119 (619)
+..|++..+. ..+|.+|...|++++|+..|+++++..|+++ +++..+|.++..+|++++|
T Consensus 124 ~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A 203 (225)
T 2yhc_A 124 RGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQA 203 (225)
T ss_dssp TTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHH
Confidence 9999987544 5789999999999999999999999999986 6899999999999999999
Q ss_pred HHHHHHHHHhCCCCH
Q 007075 120 IDAYEQCLKIDPDSR 134 (619)
Q Consensus 120 ~~~~~~al~~~P~~~ 134 (619)
++.++++....|++.
T Consensus 204 ~~~~~~l~~~~~~~~ 218 (225)
T 2yhc_A 204 EKVAKIIAANSSNTL 218 (225)
T ss_dssp HHHHHHHHHCCSCCC
T ss_pred HHHHHHHHhhCCCch
Confidence 999999999888764
No 120
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.51 E-value=1.4e-14 Score=156.86 Aligned_cols=143 Identities=17% Similarity=0.180 Sum_probs=125.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHH
Q 007075 11 MLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF---------------SQSLNNLGVV 75 (619)
Q Consensus 11 ~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~---------------~~~~~~lg~~ 75 (619)
.+++++|+..|+++++..|..+.++.++|.+++..|++++|+.+|++|++++|.+ ..+++++|.+
T Consensus 247 l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 326 (457)
T 1kt0_A 247 LKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMC 326 (457)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 3456778888888888899999999999999999999999999999999999998 6899999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHH
Q 007075 76 YTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKL 155 (619)
Q Consensus 76 ~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a 155 (619)
|..+|++++|+.+|+++++++|++..+++++|.+|..+|++++|+..|+++++++|++..++.+ ++.++...++.+++
T Consensus 327 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~--l~~~~~~~~~~~~a 404 (457)
T 1kt0_A 327 YLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQ--ISMCQKKAKEHNER 404 (457)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHH--HHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988877 55555555555443
No 121
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.50 E-value=5.2e-13 Score=144.02 Aligned_cols=160 Identities=13% Similarity=0.056 Sum_probs=131.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh---------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHF---------NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI--------KPN 64 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~---------~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l--------~p~ 64 (619)
++||.++..+|++++|+++|++|+++ +|....++.++|.+|..+|++++|+.+|++++++ .+.
T Consensus 55 n~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~ 134 (472)
T 4g1t_A 55 NLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE 134 (472)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh
Confidence 57999999999999999999999986 6777889999999999999999999999999987 345
Q ss_pred CHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 007075 65 FSQSLNNLGVVYTVQ--GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYR---DAGSISLAIDAYEQCLKIDPDSRNAGQN 139 (619)
Q Consensus 65 ~~~~~~~lg~~~~~~--g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~---~~g~~~eA~~~~~~al~~~P~~~~a~~~ 139 (619)
.+.++.++|.++... +++++|+.+|+++++++|+++.++..+|.++. ..++.++|++.|+++++++|++..++.+
T Consensus 135 ~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~ 214 (472)
T 4g1t_A 135 SPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVL 214 (472)
T ss_dssp CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHH
Confidence 678899999887765 46999999999999999999999999998855 4578899999999999999999988877
Q ss_pred HHHHHH--HhhcCCcHHHHHHHHH
Q 007075 140 RLLAMN--YINEGHDDKLFEAHRD 161 (619)
Q Consensus 140 ~~la~~--~~~~g~~~~a~~~~~~ 161 (619)
+.+... +...++.+++.+.+++
T Consensus 215 l~~~~~~~~~~~~~~~~a~~~~~~ 238 (472)
T 4g1t_A 215 LALKLHKMREEGEEEGEGEKLVEE 238 (472)
T ss_dssp HHHHHHHCC------CHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHH
Confidence 433322 2233455555555444
No 122
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.50 E-value=7.9e-14 Score=126.64 Aligned_cols=108 Identities=10% Similarity=-0.016 Sum_probs=99.0
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------cHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHhh-------
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPH-------CAE-----ACNNLGVIYKDRDNLDKAVECYQMALSI------- 61 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-------~~~-----a~~~la~~~~~~g~~~~A~~~~~~al~l------- 61 (619)
+.++|+.++..|+|++|+..|+++++++|+ +.. +|.++|.++..+|++++|+.+|++++++
T Consensus 14 ~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~ 93 (159)
T 2hr2_A 14 ALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGEL 93 (159)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccC
Confidence 367899999999999999999999999999 444 9999999999999999999999999999
Q ss_pred CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 007075 62 KPNFSQSL----NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108 (619)
Q Consensus 62 ~p~~~~~~----~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~ 108 (619)
+|++..+| +++|.++..+|++++|+.+|+++++++|++......+..
T Consensus 94 ~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~ 144 (159)
T 2hr2_A 94 NQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKER 144 (159)
T ss_dssp TSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHH
T ss_pred CCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 99999999 999999999999999999999999999987655444433
No 123
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.50 E-value=7.8e-13 Score=113.84 Aligned_cols=118 Identities=40% Similarity=0.596 Sum_probs=98.6
Q ss_pred CCCc-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 007075 28 NPHC-AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106 (619)
Q Consensus 28 ~p~~-~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~L 106 (619)
+|.. ..+++.+|.++...|++++|+++|+++++.+|++..++..+|.++...|++++|+.+++++++.+|.+..++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 83 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL 83 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 4444 678888888888999999999999999988888888888899999999999999999999999888888888899
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 007075 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147 (619)
Q Consensus 107 g~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~ 147 (619)
|.++...|++++|+.+|+++++.+|++..+..+ ++..+.
T Consensus 84 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~--l~~~~~ 122 (125)
T 1na0_A 84 GNAYYKQGDYDEAIEYYQKALELDPNNAEAKQN--LGNAKQ 122 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHH--HHHHHH
Confidence 999999999999999999999988888877766 444433
No 124
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.50 E-value=4.6e-13 Score=118.47 Aligned_cols=107 Identities=17% Similarity=0.183 Sum_probs=101.7
Q ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 007075 26 HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105 (619)
Q Consensus 26 ~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~ 105 (619)
..+|.++..++.+|.++...|++++|+.+|+++++++|++..++.++|.++..+|++++|+..++++++++|+++.++++
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 007075 106 LGVLYRDAGSISLAIDAYEQCLKIDPD 132 (619)
Q Consensus 106 Lg~~~~~~g~~~eA~~~~~~al~~~P~ 132 (619)
+|.++..+|++++|+..|+++++++|+
T Consensus 83 l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 83 LGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 999999999999999999999999887
No 125
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.49 E-value=1.2e-13 Score=126.95 Aligned_cols=73 Identities=15% Similarity=0.105 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 007075 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR 134 (619)
Q Consensus 62 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~ 134 (619)
+|.+..++.++|.++..+|++++|+..++++++++|+++.+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 59 ~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 59 DRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 4444555556666666666666666666666666666666666666666666666666666666666666555
No 126
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.49 E-value=3.7e-13 Score=140.68 Aligned_cols=259 Identities=14% Similarity=0.065 Sum_probs=158.7
Q ss_pred HHHHHHhHhCCccEEEeCCCCCCCCcchhhcc--CCcceeEecccC-CCC---CCCCCccEEEecCCCCCCCccCCCccc
Q 007075 254 KKVAAMVREDKIDILVELTGHTANNKLGMMAC--QPAPVQVTWIGY-PNT---TGLPTIDYRITDSLADPPETKQKHVEE 327 (619)
Q Consensus 254 ~~~~~~i~~d~~Dilvdl~g~t~~~r~~~~a~--r~Apvq~~~~G~-p~t---tg~~~~Dy~i~d~~~~p~~~~~~~~E~ 327 (619)
.++.+.|++.++||++...... +....++. .-.|+-++..+. +.. .-....|.+++.. +. .+. +
T Consensus 86 ~~l~~~l~~~~pDvv~~~~~~~--~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~~~~~~d~v~~~~---~~----~~~-~ 155 (364)
T 1f0k_A 86 RQARAIMKAYKPDVVLGMGGYV--SGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAF---PG----AFP-N 155 (364)
T ss_dssp HHHHHHHHHHCCSEEEECSSTT--HHHHHHHHHHTTCCEEEEECSSSCCHHHHHHTTTCSEEEESS---TT----SSS-S
T ss_pred HHHHHHHHhcCCCEEEEeCCcC--chHHHHHHHHcCCCEEEEecCCCCcHHHHHHHHhCCEEEecC---hh----hcC-C
Confidence 3577888999999998753321 12222222 224555544332 110 0124567776531 11 122 4
Q ss_pred eEEcCCCccc--cCCCCCCCCCCCCCCCCCC-CeEEEecCCC--CcCCHHHHHHHHHHHHHCCCce-EEEeccCCCCHHH
Q 007075 328 LIRLPECFLC--YTPSPEAGPVCPTPALTNG-FITFGSFNNL--AKITPKVLQVWARILCAVPNSR-LVVKCKPFCCDSV 401 (619)
Q Consensus 328 l~~lp~~~~~--~~p~~~~~~~~~~~~l~~~-~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~-l~l~g~~~~~~~~ 401 (619)
+..+|+.... |.+. ..+...+++.+ .+++.+.++. .|..+.+++++.++.. +.+ ++++|.+ +
T Consensus 156 ~~~i~n~v~~~~~~~~----~~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~~~~l~i~G~~----~- 223 (364)
T 1f0k_A 156 AEVVGNPVRTDVLALP----LPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIWHQSGKG----S- 223 (364)
T ss_dssp CEECCCCCCHHHHTSC----CHHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEEEECCTT----C-
T ss_pred ceEeCCccchhhcccc----hhhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---CcEEEEEcCCc----h-
Confidence 4555553211 1111 00011123333 4456666666 4666777788877643 567 5667765 2
Q ss_pred HHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCcccc--chhHHH
Q 007075 402 RHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH--NVGVSL 479 (619)
Q Consensus 402 ~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~--r~~~~~ 479 (619)
.+.+++.+++.|++ +|+|.|++ .+...+|..+|+++.|+ ||++++|||++|+|||+.+...... ...+..
T Consensus 224 ~~~l~~~~~~~~~~--~v~~~g~~---~~~~~~~~~ad~~v~~s---g~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~ 295 (364)
T 1f0k_A 224 QQSVEQAYAEAGQP--QHKVTEFI---DDMAAAYAWADVVVCRS---GALTVSEIAAAGLPALFVPFQHKDRQQYWNALP 295 (364)
T ss_dssp HHHHHHHHHHTTCT--TSEEESCC---SCHHHHHHHCSEEEECC---CHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHH
T ss_pred HHHHHHHHhhcCCC--ceEEecch---hhHHHHHHhCCEEEECC---chHHHHHHHHhCCCEEEeeCCCCchhHHHHHHH
Confidence 36788888888884 69999996 46778888999999886 5899999999999999865321110 011334
Q ss_pred HHhcCCCcccc-CC--HHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHH
Q 007075 480 LTKVGLKHLIA-KN--EDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHRY 547 (619)
Q Consensus 480 l~~~gl~~~v~-~~--~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~~~ 547 (619)
+...|..-++. .| ++++++...++ |++.++++++..++.. ..|+++.+++.+++.|+++-..|
T Consensus 296 ~~~~g~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 296 LEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAAS---IPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp HHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC---CTTHHHHHHHHHHHHHTTC----
T ss_pred HHhCCcEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh---ccCHHHHHHHHHHHHHHHHHhhc
Confidence 55556633333 23 67888777777 9999999999887653 35999999999999999875443
No 127
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.49 E-value=4.8e-13 Score=129.04 Aligned_cols=156 Identities=13% Similarity=0.056 Sum_probs=135.4
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC----CHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRD----NLDKAVECYQMALSIKPNFSQSLNNLGVVY 76 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g----~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 76 (619)
++++|.+|...+++++|+.+|+++++. .++.++++||.+|.. + ++++|+++|+++.+ +.++.++++||.+|
T Consensus 21 ~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y 95 (212)
T 3rjv_A 21 QYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVL 95 (212)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHH
Confidence 368999999999999999999999875 689999999999998 7 99999999999965 68899999999999
Q ss_pred HH----cCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 007075 77 TV----QGKMDAAAEMIEKAIAANP--TYAEAYNNLGVLYRD----AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146 (619)
Q Consensus 77 ~~----~g~~~eA~~~~~~al~~~p--~~~~a~~~Lg~~~~~----~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~ 146 (619)
.. .+++++|+.+|+++++..+ +++.++++||.+|.. .+++++|+.+|++++++ |.+..+.++ ++..|
T Consensus 96 ~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~--Lg~~y 172 (212)
T 3rjv_A 96 VNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYW--AGMMF 172 (212)
T ss_dssp TCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHH--HHHHH
T ss_pred HcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHH--HHHHH
Confidence 88 8999999999999999988 459999999999999 89999999999999998 666677766 66666
Q ss_pred hhc-C-----CcHHHHHHHHHHHH
Q 007075 147 INE-G-----HDDKLFEAHRDWGK 164 (619)
Q Consensus 147 ~~~-g-----~~~~a~~~~~~~~~ 164 (619)
... | +.+++...++...+
T Consensus 173 ~~g~gg~~~~d~~~A~~~~~~A~~ 196 (212)
T 3rjv_A 173 QQGEKGFIEPNKQKALHWLNVSCL 196 (212)
T ss_dssp HHCBTTTBCCCHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCHHHHHHHHHHHHH
Confidence 543 2 67777776665443
No 128
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.49 E-value=1.6e-14 Score=157.31 Aligned_cols=133 Identities=18% Similarity=0.198 Sum_probs=121.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 81 (619)
+++|..+...|++++|+.+|+++++.+|++..+++++|.+|..+|++++|+++|+++++++|++..+++++|.+|..+|+
T Consensus 10 ~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 89 (477)
T 1wao_1 10 KTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGK 89 (477)
T ss_dssp SSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHHhCCCCH
Q 007075 82 MDAAAEMIEKAIAANPTYAEAYNNLGVL--YRDAGSISLAIDAYE-----------QCLKIDPDSR 134 (619)
Q Consensus 82 ~~eA~~~~~~al~~~p~~~~a~~~Lg~~--~~~~g~~~eA~~~~~-----------~al~~~P~~~ 134 (619)
+++|++.|+++++++|++..++.+++.+ +..+|++++|++.++ ++++++|+..
T Consensus 90 ~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~ 155 (477)
T 1wao_1 90 FRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYS 155 (477)
T ss_dssp HHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccc
Confidence 9999999999999999999999999999 889999999999999 8888877653
No 129
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.48 E-value=1.8e-12 Score=111.54 Aligned_cols=114 Identities=41% Similarity=0.616 Sum_probs=109.8
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|.++...|++++|+.+|++++..+|.+..++..+|.++...|++++|+.+++++++.+|.+..++.++|.++...|
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 91 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG 91 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g 114 (619)
++++|+.+++++++.+|++..++.++|.++...|
T Consensus 92 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 92 DYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999987765
No 130
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.48 E-value=1.1e-13 Score=139.69 Aligned_cols=135 Identities=16% Similarity=0.091 Sum_probs=118.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|+++++.+|++..+++++|.++..+|++++|+..|+++++++|++..+++++|.++..+|
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 86 (281)
T 2c2l_A 7 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEME 86 (281)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCH-----H--------------------------HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 81 KMDAAAEMIEKAIAANPTYA-----E--------------------------AYNNLGVLYRDAGSISLAIDAYEQCLKI 129 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~-----~--------------------------a~~~Lg~~~~~~g~~~eA~~~~~~al~~ 129 (619)
++++|+..|+++++++|++. . ....++.+ ..|++++|++.|++++++
T Consensus 87 ~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~~A~~~~~~al~~ 164 (281)
T 2c2l_A 87 SYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRL--IAAERERELEECQRNHEG 164 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--HHHHHHHHHTTTSGGGTT
T ss_pred CHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHHhhhcc
Confidence 99999999999999988642 1 11222222 367889999999999999
Q ss_pred CCCCHHHH
Q 007075 130 DPDSRNAG 137 (619)
Q Consensus 130 ~P~~~~a~ 137 (619)
+|++....
T Consensus 165 ~p~~~~~~ 172 (281)
T 2c2l_A 165 HEDDGHIR 172 (281)
T ss_dssp TSCHHHHT
T ss_pred ccchhhhh
Confidence 99765433
No 131
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.48 E-value=9.2e-13 Score=112.31 Aligned_cols=109 Identities=19% Similarity=0.286 Sum_probs=89.2
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 007075 31 CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110 (619)
Q Consensus 31 ~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~ 110 (619)
.+..++.+|.++...|++++|+.+|+++++.+|++..++.++|.++...|++++|+..++++++.+|+++.++.++|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35677788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 007075 111 RDAGSISLAIDAYEQCLKIDPDSRNAGQN 139 (619)
Q Consensus 111 ~~~g~~~eA~~~~~~al~~~P~~~~a~~~ 139 (619)
...|++++|+..|+++++.+|++..++..
T Consensus 83 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 111 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKHEANNPQLKEG 111 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 88888888888888888888887776655
No 132
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.48 E-value=2.7e-12 Score=111.75 Aligned_cols=130 Identities=37% Similarity=0.531 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 007075 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112 (619)
Q Consensus 33 ~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~ 112 (619)
.+++.+|.++...|++++|+..++++++.+|++...+..+|.++...|++++|+.+++++++..|.+..++..+|.++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 113 AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 113 ~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
.|++++|+..++++++..|++...+.. ++..+...|+.+++...+++..+
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~~~~--la~~~~~~~~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEAWYN--LGNAYYKQGDYDEAIEYYQKALE 131 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHH--HHHHHHHHccHHHHHHHHHHHHc
Confidence 999999999999999999998877665 78888999999998887766543
No 133
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.47 E-value=3.5e-13 Score=119.24 Aligned_cols=114 Identities=17% Similarity=0.094 Sum_probs=105.8
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|++++..+|++..+++++|.++..+|++++|+.+++++++++|++..+++++|.++...|
T Consensus 12 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 91 (137)
T 3q49_B 12 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEME 91 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHh
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHcC
Q 007075 81 KMDAAAEMIEKAIAANPT-----YAEAYNNLGVLYRDAG 114 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~-----~~~a~~~Lg~~~~~~g 114 (619)
++++|+.+|+++++++|+ ...+...+..+.....
T Consensus 92 ~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~ 130 (137)
T 3q49_B 92 SYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRW 130 (137)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988 6677777766655443
No 134
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.47 E-value=1.9e-13 Score=139.65 Aligned_cols=160 Identities=14% Similarity=0.109 Sum_probs=134.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------CHHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPH------CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN------FSQSL 69 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~------~~~~~ 69 (619)
...|.+|...|++++|+.+|++++++.+. ...++.++|.+|..+|++++|+.+|++++++.+. ...++
T Consensus 40 ~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~ 119 (307)
T 2ifu_A 40 AKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMAL 119 (307)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 35678899999999999999999987543 2568999999999999999999999999998432 24578
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHH
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTY------AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN----AGQN 139 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~----a~~~ 139 (619)
.++|.+|.. |++++|+.+|++++++.+.. ..++.++|.+|..+|++++|+.+|++++++.|++.. ....
T Consensus 120 ~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 198 (307)
T 2ifu_A 120 DRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKC 198 (307)
T ss_dssp HHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHH
Confidence 999999998 99999999999999997754 578999999999999999999999999998665431 2233
Q ss_pred HHHHHHHhhcCCcHHHHHHHHHH
Q 007075 140 RLLAMNYINEGHDDKLFEAHRDW 162 (619)
Q Consensus 140 ~~la~~~~~~g~~~~a~~~~~~~ 162 (619)
..++.++...|+++++...+++.
T Consensus 199 ~~~g~~~~~~g~~~~A~~~~~~a 221 (307)
T 2ifu_A 199 IAQVLVQLHRADYVAAQKCVRES 221 (307)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 44677788889999888877654
No 135
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.47 E-value=2.2e-12 Score=109.88 Aligned_cols=110 Identities=15% Similarity=0.226 Sum_probs=106.3
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++.+|..+...|++++|+.+|++++..+|++..++.++|.++...|++++|+.+++++++.+|++..++.++|.++...|
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 86 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLN 86 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLY 110 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~ 110 (619)
++++|+.+++++++.+|++..++..++.+.
T Consensus 87 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 87 RFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999999999999999998775
No 136
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.46 E-value=2.8e-13 Score=134.39 Aligned_cols=157 Identities=25% Similarity=0.400 Sum_probs=134.9
Q ss_pred HHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHHH
Q 007075 9 GEMLKFDMAIVFYELAFHF--------NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI--------KPNFSQSLNNL 72 (619)
Q Consensus 9 ~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l--------~p~~~~~~~~l 72 (619)
...|++++|+.+|+++++. .|....++..+|.++...|++++|+.+|++++++ .|....++.++
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 91 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNL 91 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 3467888999999999884 3567889999999999999999999999999988 36667799999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHH
Q 007075 73 GVVYTVQGKMDAAAEMIEKAIAA--------NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI--------DPDSRNA 136 (619)
Q Consensus 73 g~~~~~~g~~~eA~~~~~~al~~--------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~--------~P~~~~a 136 (619)
|.++...|++++|+.+++++++. +|....++.++|.++..+|++++|+.+|++++++ .|....+
T Consensus 92 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 171 (283)
T 3edt_B 92 AVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKT 171 (283)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 99999999999999999999998 4677889999999999999999999999999998 4443344
Q ss_pred HHHHHHHHHHhhcCCcHHHHHHHHHHHHHHH
Q 007075 137 GQNRLLAMNYINEGHDDKLFEAHRDWGKRFM 167 (619)
Q Consensus 137 ~~~~~la~~~~~~g~~~~a~~~~~~~~~~~~ 167 (619)
+. .++.++...|+++++.+.+++..+...
T Consensus 172 ~~--~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 172 KN--NLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp HH--HHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HH--HHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 44 488899999999999998887766543
No 137
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.46 E-value=3.8e-13 Score=145.61 Aligned_cols=127 Identities=20% Similarity=0.232 Sum_probs=114.9
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHC---------------AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~ 65 (619)
++++|..+++.|+|++|+.+|+++++++|.+ ..+++++|.+|..+|++++|+.+|+++++++|++
T Consensus 271 ~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 350 (457)
T 1kt0_A 271 VKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSAN 350 (457)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc
Confidence 3678999999999999999999999999998 7999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHH
Q 007075 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDA-YEQCL 127 (619)
Q Consensus 66 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~-~~~al 127 (619)
..+++++|.+|..+|++++|+.+|+++++++|++..++.+++.++..++++++|... |++++
T Consensus 351 ~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f 413 (457)
T 1kt0_A 351 EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMF 413 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999887753 44433
No 138
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.46 E-value=9.1e-13 Score=120.88 Aligned_cols=115 Identities=16% Similarity=0.106 Sum_probs=106.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHF------------------NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP 63 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~------------------~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p 63 (619)
.++|..++..|+|++|+.+|++++.+ +|....+++++|.++..+|++++|+..++++++++|
T Consensus 15 ~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p 94 (162)
T 3rkv_A 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREE 94 (162)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCC
Confidence 57899999999999999999999999 777789999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcCCH
Q 007075 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA-EAYNNLGVLYRDAGSI 116 (619)
Q Consensus 64 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~-~a~~~Lg~~~~~~g~~ 116 (619)
+++.+++++|.++..+|++++|+..|+++++++|++. .+...++.+....++.
T Consensus 95 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 95 TNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEK 148 (162)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 6677777776555443
No 139
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.45 E-value=2.2e-12 Score=112.69 Aligned_cols=104 Identities=21% Similarity=0.209 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHH
Q 007075 34 ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS---QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY---AEAYNNLG 107 (619)
Q Consensus 34 a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~---~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~---~~a~~~Lg 107 (619)
+++.+|.++...|++++|++.|+++++.+|++. .+++.+|.++...|++++|+..|+++++.+|++ +.+++++|
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 345566666666666666666666666666555 566666666666666666666666666666666 55666666
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 007075 108 VLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137 (619)
Q Consensus 108 ~~~~~~g~~~eA~~~~~~al~~~P~~~~a~ 137 (619)
.++..+|++++|+..|+++++..|++..+.
T Consensus 84 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 113 (129)
T 2xev_A 84 LSQYGEGKNTEAQQTLQQVATQYPGSDAAR 113 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTSHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCChHHH
Confidence 666666666666666666666666655443
No 140
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.45 E-value=4.6e-13 Score=113.21 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=102.2
Q ss_pred hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHH
Q 007075 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT--YAEAYN 104 (619)
Q Consensus 27 ~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~--~~~a~~ 104 (619)
++|++..+++.+|.++...|++++|+.+|+++++++|.+..++.++|.++...|++++|+.+++++++.+|+ +..++.
T Consensus 1 l~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 80 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWA 80 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHH
Confidence 368888899999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHc-CCHHHHHHHHHHHHHhCCCCH
Q 007075 105 NLGVLYRDA-GSISLAIDAYEQCLKIDPDSR 134 (619)
Q Consensus 105 ~Lg~~~~~~-g~~~eA~~~~~~al~~~P~~~ 134 (619)
++|.++..+ |++++|+++++++++..|.+.
T Consensus 81 ~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 81 AKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999999999 999999999999999998753
No 141
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.44 E-value=6.7e-12 Score=127.10 Aligned_cols=161 Identities=6% Similarity=-0.071 Sum_probs=133.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCA------EACNNLGVIYKDRDNLDKAVECYQMALSIKPNF------SQSL 69 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~------~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~ 69 (619)
...+..+...|++++|++.++++++..+... ..++.+|.++...|++++|+.++++++++.+.. ..++
T Consensus 79 ~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 158 (293)
T 2qfc_A 79 KDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIE 158 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 3567788999999999999999999877654 346788999999999999999999999875543 5689
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHH
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAI---AANPTYA----EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS----RNAGQ 138 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al---~~~p~~~----~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~----~~a~~ 138 (619)
.++|.+|..+|++++|+.+|++++ +..|++. .+++++|.+|..+|++++|+.++++++++.++. ..+..
T Consensus 159 ~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~ 238 (293)
T 2qfc_A 159 NAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQL 238 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 999999999999999999999999 5566643 689999999999999999999999999875421 11333
Q ss_pred HHHHHHHHhhcCCcHHH-HHHHHHH
Q 007075 139 NRLLAMNYINEGHDDKL-FEAHRDW 162 (619)
Q Consensus 139 ~~~la~~~~~~g~~~~a-~~~~~~~ 162 (619)
...++.+|...|++++| ...+++.
T Consensus 239 ~~~lg~~y~~~g~~~~Ai~~~~~~A 263 (293)
T 2qfc_A 239 YYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 44488899999999998 5545543
No 142
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.44 E-value=2.1e-12 Score=139.28 Aligned_cols=162 Identities=17% Similarity=0.128 Sum_probs=138.5
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHc--CCHHHHHHHHHHHHhhCCCCHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHF--------NPHCAEACNNLGVIYKDR--DNLDKAVECYQMALSIKPNFSQSLN 70 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~la~~~~~~--g~~~~A~~~~~~al~l~p~~~~~~~ 70 (619)
|.++|.+|..+|++++|+.+|++++++ .+..+.++.++|.++... +++++|+++|+++++++|+++.++.
T Consensus 97 ~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~ 176 (472)
T 4g1t_A 97 WGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTS 176 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHH
Confidence 368999999999999999999999986 345678899998877664 5799999999999999999999999
Q ss_pred HHHHHHH---HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 007075 71 NLGVVYT---VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA----GSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143 (619)
Q Consensus 71 ~lg~~~~---~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~----g~~~eA~~~~~~al~~~P~~~~a~~~~~la 143 (619)
.+|.++. ..+++++|++.|+++++++|++..++.++|..+... |++++|+++|+++++.+|++..++.+ ++
T Consensus 177 ~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~--lg 254 (472)
T 4g1t_A 177 GLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRS--AA 254 (472)
T ss_dssp HHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHH--HH
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHH--HH
Confidence 9998865 457788999999999999999999999998876654 67789999999999999999988877 78
Q ss_pred HHHhhcCCcHHHHHHHHHHHH
Q 007075 144 MNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 144 ~~~~~~g~~~~a~~~~~~~~~ 164 (619)
..|...|+++++.+.+++..+
T Consensus 255 ~~~~~~~~~~~A~~~~~~al~ 275 (472)
T 4g1t_A 255 KFYRRKDEPDKAIELLKKALE 275 (472)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCchHHHHHHHHHHHH
Confidence 889999999998888776544
No 143
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.44 E-value=9.9e-13 Score=138.94 Aligned_cols=165 Identities=21% Similarity=0.263 Sum_probs=142.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH----HHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCA----EACNNLGVIYKDRDNLDKAVECYQMALSI------KPNFSQSLNN 71 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~----~a~~~la~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~ 71 (619)
+.+|..+...|++++|+.+|+++++..|++. .++..+|.++...|++++|+++|++++++ .+....++.+
T Consensus 52 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 131 (411)
T 4a1s_A 52 ALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGN 131 (411)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHH
Confidence 5689999999999999999999999999986 58999999999999999999999999998 5677789999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCC-----------------HHHHHHHHHHHHH
Q 007075 72 LGVVYTVQGKMDAAAEMIEKAIAA------NPTYAEAYNNLGVLYRDAGS-----------------ISLAIDAYEQCLK 128 (619)
Q Consensus 72 lg~~~~~~g~~~eA~~~~~~al~~------~p~~~~a~~~Lg~~~~~~g~-----------------~~eA~~~~~~al~ 128 (619)
+|.++...|++++|+.++++++++ .+....++.++|.+|...|+ +++|+.+++++++
T Consensus 132 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~ 211 (411)
T 4a1s_A 132 LGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLK 211 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 56667899999999999999 9999999999987
Q ss_pred hCCC----CHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 129 IDPD----SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 129 ~~P~----~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
+.+. ...+.....++..|...|+++++.+.+++..+..
T Consensus 212 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 253 (411)
T 4a1s_A 212 LMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIA 253 (411)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 6421 1122334457888899999999888877765543
No 144
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=3.2e-12 Score=114.12 Aligned_cols=113 Identities=15% Similarity=0.153 Sum_probs=107.2
Q ss_pred hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 007075 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF---SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY 103 (619)
Q Consensus 27 ~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~---~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~ 103 (619)
.+|.....++.+|..+...|++++|+++|+++++++|++ ..++.++|.++...|++++|+.+++++++.+|++..++
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 457789999999999999999999999999999999998 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 007075 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139 (619)
Q Consensus 104 ~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~ 139 (619)
+++|.++..+|++++|+.+|+++++++|++..++..
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 138 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEA 138 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 999999999999999999999999999999877655
No 145
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.44 E-value=6.3e-14 Score=145.56 Aligned_cols=135 Identities=17% Similarity=0.146 Sum_probs=86.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCA-----------------EACNNLGVIYKDRDNLDKAVECYQMALSIKP 63 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-----------------~a~~~la~~~~~~g~~~~A~~~~~~al~l~p 63 (619)
++++|..++..|+|++|+.+|++++.+.|++. .+++++|.+|..+|++++|+.+|+++++++|
T Consensus 182 ~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 261 (338)
T 2if4_A 182 RKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEE 261 (338)
T ss_dssp HHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 36789999999999999999999999999877 4889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHH
Q 007075 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL-YRDAGSISLAIDAYEQCLKIDPDSRN 135 (619)
Q Consensus 64 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~-~~~~g~~~eA~~~~~~al~~~P~~~~ 135 (619)
++..+++++|.+|..+|++++|+.+|+++++++|++..++.+|+.+ ....+..+++...|++++...|++..
T Consensus 262 ~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 262 KNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999999999999999999999999999999999888 44556778888899999998887653
No 146
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.44 E-value=7.3e-13 Score=139.33 Aligned_cols=152 Identities=16% Similarity=0.223 Sum_probs=127.5
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPH-------CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF------SQ 67 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-------~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~------~~ 67 (619)
++++|.++...|++++|+.++++++++.+. ...++.++|.+|..+|++++|+++|++++++.+.. ..
T Consensus 146 ~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 225 (383)
T 3ulq_A 146 FFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGR 225 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 468999999999999999999999997433 35689999999999999999999999999885433 24
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHH-H
Q 007075 68 SLNNLGVVYTVQGKMDAAAEMIEKAIA-----AN-PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD--SRNAG-Q 138 (619)
Q Consensus 68 ~~~~lg~~~~~~g~~~eA~~~~~~al~-----~~-p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~--~~~a~-~ 138 (619)
++.++|.+|..+|++++|+.+++++++ .+ |....++.++|.++..+|++++|+.++++++++.+. ++... .
T Consensus 226 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 305 (383)
T 3ulq_A 226 TLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSE 305 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 899999999999999999999999999 46 788899999999999999999999999999988432 22111 1
Q ss_pred HHHHHHHHhhcCCc
Q 007075 139 NRLLAMNYINEGHD 152 (619)
Q Consensus 139 ~~~la~~~~~~g~~ 152 (619)
...++..|...|+.
T Consensus 306 ~~~l~~~~~~~~~~ 319 (383)
T 3ulq_A 306 FEFLKSLYLSGPDE 319 (383)
T ss_dssp HHHHHHHHTSSCCH
T ss_pred HHHHHHHHhCCCcH
Confidence 23366777777773
No 147
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.43 E-value=4.4e-13 Score=125.02 Aligned_cols=127 Identities=13% Similarity=0.069 Sum_probs=113.9
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK-DRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ 79 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 79 (619)
++++|.++...|++++|+..|++++..+| ++..+..++.+.. ..++..+|++.++++++++|+++.+++++|.++...
T Consensus 43 ~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~ 121 (176)
T 2r5s_A 43 KLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQV 121 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 36899999999999999999999999999 8877776665533 333445689999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 80 GKMDAAAEMIEKAIAANPTY--AEAYNNLGVLYRDAGSISLAIDAYEQCLK 128 (619)
Q Consensus 80 g~~~eA~~~~~~al~~~p~~--~~a~~~Lg~~~~~~g~~~eA~~~~~~al~ 128 (619)
|++++|+..|+++++.+|+. ..++.++|.++..+|+.++|+..|++++.
T Consensus 122 g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 122 GRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp TCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999999986 66999999999999999999999999875
No 148
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.43 E-value=5.3e-13 Score=146.88 Aligned_cols=171 Identities=9% Similarity=0.042 Sum_probs=119.4
Q ss_pred CCCCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHH
Q 007075 354 TNGFITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431 (619)
Q Consensus 354 ~~~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~ 431 (619)
.++.++|++++|+ .|..+.+++++.+++++ +.+|+|+|.| ++.....++...... . ++|.|.+..+ ..+.
T Consensus 324 d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G--~~~~~~~~~~~~~~~--~-~~v~~~~~~~-~~~~ 395 (536)
T 3vue_A 324 DRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTG--KKKFEKLLKSMEEKY--P-GKVRAVVKFN-APLA 395 (536)
T ss_dssp CTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCB--CHHHHHHHHHHHHHS--T-TTEEEECSCC-HHHH
T ss_pred CCCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEecc--CchHHHHHHHHHhhc--C-CceEEEEecc-HHHH
Confidence 3567889999999 69999999999999865 5677777766 445555665555444 3 7899998876 5677
Q ss_pred HHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCcc----------cc--CCHHHHHH
Q 007075 432 MQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL----------IA--KNEDEYVQ 498 (619)
Q Consensus 432 ~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~----------v~--~~~~~y~~ 498 (619)
..+|+.+||||-||.+ ++|++.+|||++|+|||+..-. |..-+..-|.+++ +. .|.+++++
T Consensus 396 ~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g------G~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ 469 (536)
T 3vue_A 396 HLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTG------GLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAA 469 (536)
T ss_dssp HHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCT------HHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHH
T ss_pred HHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCC------CchheeeCCCCccccccCCCceeEECCCCHHHHHH
Confidence 7889999999999987 7799999999999999974421 1111111133322 21 35666665
Q ss_pred HH---HHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHH
Q 007075 499 LA---LQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544 (619)
Q Consensus 499 ~a---~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~ 544 (619)
.. +.+..++.++ +++ |..+. ..|+|++.+++++++|+++.
T Consensus 470 ai~ral~~~~~~~~~-~~~---~~am~--~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 470 TLKRAIKVVGTPAYE-EMV---RNCMN--QDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHHHHTTSHHHH-HHH---HHHHH--SCCSSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCcHHHH-HHH---HHHHH--hcCCHHHHHHHHHHHHHHhh
Confidence 55 4444565433 332 23333 34999999999999999874
No 149
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.43 E-value=8.2e-13 Score=138.86 Aligned_cols=162 Identities=19% Similarity=0.109 Sum_probs=137.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-------CHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFN------PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN-------FSQS 68 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~------p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~-------~~~~ 68 (619)
+.+|..+...|++++|+.+|++++++. +..+.+++++|.+|...|++++|+.++++++++.+. ...+
T Consensus 105 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 184 (378)
T 3q15_A 105 FFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQS 184 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHH
Confidence 568999999999999999999999863 234678999999999999999999999999987442 2457
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHH
Q 007075 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPT------YAEAYNNLGVLYRDAGSISLAIDAYEQCLK-----IDPDSRNAG 137 (619)
Q Consensus 69 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~------~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~-----~~P~~~~a~ 137 (619)
+.++|.++...|++++|+.++++++++.+. ...++.++|.+|..+|++++|+.+|+++++ .+|....+.
T Consensus 185 ~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 264 (378)
T 3q15_A 185 LFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVL 264 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHH
Confidence 889999999999999999999999997432 246899999999999999999999999999 666654444
Q ss_pred HHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 007075 138 QNRLLAMNYINEGHDDKLFEAHRDWGKR 165 (619)
Q Consensus 138 ~~~~la~~~~~~g~~~~a~~~~~~~~~~ 165 (619)
. .++.++...|++++|.+.+++..+.
T Consensus 265 ~--~la~~~~~~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 265 F--GLSWTLCKAGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp H--HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred H--HHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4 4889999999999998887765443
No 150
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.9e-12 Score=115.52 Aligned_cols=112 Identities=14% Similarity=0.095 Sum_probs=106.3
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHC---AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYT 77 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 77 (619)
++.+|..+...|++++|+.+|+++++.+|++ ..++.++|.++...|++++|+.+++++++++|++..+++++|.++.
T Consensus 31 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 110 (148)
T 2dba_A 31 LRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALE 110 (148)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHH
Confidence 3678999999999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 007075 78 VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112 (619)
Q Consensus 78 ~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~ 112 (619)
..|++++|+.+|+++++++|++..++..++.+...
T Consensus 111 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 111 KLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999888877543
No 151
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.42 E-value=1.2e-12 Score=137.73 Aligned_cols=120 Identities=18% Similarity=0.183 Sum_probs=91.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH----------------hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFH----------------FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~----------------~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~ 65 (619)
+++|..++..|++++|+.+|+++++ .+|.+..++.++|.+|..+|++++|+++++++++++|++
T Consensus 227 ~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 306 (370)
T 1ihg_A 227 KNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN 306 (370)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchh
Confidence 5678888888888888888888887 566667777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 007075 66 SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAID 121 (619)
Q Consensus 66 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~ 121 (619)
+.+++++|.+|..+|++++|+..|+++++++|++..++..++.++..+++++++.+
T Consensus 307 ~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 307 TKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777777777777777777777777777777777776666654
No 152
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.41 E-value=5.2e-13 Score=141.10 Aligned_cols=166 Identities=23% Similarity=0.273 Sum_probs=142.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHF------NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI------KPNFSQS 68 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l------~p~~~~~ 68 (619)
++.+|.++...|++++|+.+|++++++ .+....++.++|.++...|++++|+.+|++++++ .+....+
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 168 (411)
T 4a1s_A 89 YSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRA 168 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHH
Confidence 367899999999999999999999987 5677889999999999999999999999999998 5666779
Q ss_pred HHHHHHHHHHcCC-----------------HHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 007075 69 LNNLGVVYTVQGK-----------------MDAAAEMIEKAIAAN------PTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125 (619)
Q Consensus 69 ~~~lg~~~~~~g~-----------------~~eA~~~~~~al~~~------p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~ 125 (619)
+.++|.++...|+ +++|+.++++++++. +....++.++|.++..+|++++|+.+|++
T Consensus 169 ~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 248 (411)
T 4a1s_A 169 LYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQE 248 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 9999999999999 999999999998874 33456899999999999999999999999
Q ss_pred HHHhCCCCHH----HHHHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 126 CLKIDPDSRN----AGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 126 al~~~P~~~~----a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
++++.+.... +.....++..|...|+++++.+.+++..+..
T Consensus 249 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 293 (411)
T 4a1s_A 249 RLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALA 293 (411)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 9998764322 2233447888999999999988887765544
No 153
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.40 E-value=1.7e-12 Score=136.22 Aligned_cols=165 Identities=21% Similarity=0.204 Sum_probs=136.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHC----AEACNNLGVIYKDRDNLDKAVECYQMALSI------KPNFSQSLNN 71 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~----~~a~~~la~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~ 71 (619)
+.+|..+...|++++|+.+|+++++..|++ ..++..+|.++...|++++|+.++++++++ .|....++.+
T Consensus 13 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 92 (406)
T 3sf4_A 13 ALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGN 92 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 578999999999999999999999999988 468899999999999999999999999887 3445678999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC--------------------HHHHHHHHHH
Q 007075 72 LGVVYTVQGKMDAAAEMIEKAIAANPTY------AEAYNNLGVLYRDAGS--------------------ISLAIDAYEQ 125 (619)
Q Consensus 72 lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~--------------------~~eA~~~~~~ 125 (619)
+|.++...|++++|+.++++++++.+.. ..++.++|.++...|+ +++|+.++++
T Consensus 93 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~ 172 (406)
T 3sf4_A 93 LGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEE 172 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999987653 4588999999999999 9999999999
Q ss_pred HHHhCCCC----HHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 126 CLKIDPDS----RNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 126 al~~~P~~----~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
++++.+.. ..+.....++..|...|+++++.+.+++..+..
T Consensus 173 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 217 (406)
T 3sf4_A 173 NLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIA 217 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 98762211 122233447788888899988888777665543
No 154
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.40 E-value=6.7e-12 Score=109.64 Aligned_cols=115 Identities=20% Similarity=0.166 Sum_probs=105.0
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCA---EACNNLGVIYKDRDNLDKAVECYQMALSIKPNF---SQSLNNLGV 74 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~---~~~~~~lg~ 74 (619)
++++|..+...|++++|+..|+++++.+|++. .+++.+|.++...|++++|+..|+++++.+|++ +.+++++|.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~ 84 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGL 84 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHH
Confidence 36899999999999999999999999999988 899999999999999999999999999999999 899999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 007075 75 VYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115 (619)
Q Consensus 75 ~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~ 115 (619)
++..+|++++|+..|+++++..|++..+...+..+-...++
T Consensus 85 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 85 SQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred HHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 99999999999999999999999998877766655544433
No 155
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.40 E-value=2e-12 Score=131.16 Aligned_cols=165 Identities=21% Similarity=0.213 Sum_probs=138.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHC----AEACNNLGVIYKDRDNLDKAVECYQMALSI------KPNFSQSLNN 71 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~----~~a~~~la~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~ 71 (619)
+..|..+...|++++|+.+|+++++..|++ ..++..+|.++...|++++|++++++++++ .+....++..
T Consensus 9 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 88 (338)
T 3ro2_A 9 ALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGN 88 (338)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 567999999999999999999999999998 468889999999999999999999999987 4455678999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC--------------------HHHHHHHHHH
Q 007075 72 LGVVYTVQGKMDAAAEMIEKAIAANPTY------AEAYNNLGVLYRDAGS--------------------ISLAIDAYEQ 125 (619)
Q Consensus 72 lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~--------------------~~eA~~~~~~ 125 (619)
+|.++...|++++|+.++++++++.+.. ..++.++|.++...|+ +++|+.++++
T Consensus 89 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~ 168 (338)
T 3ro2_A 89 LGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEE 168 (338)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999886643 4489999999999999 9999999999
Q ss_pred HHHhCCC----CHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 126 CLKIDPD----SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 126 al~~~P~----~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
++++.+. ...+.....++..+...|+++++.+.+++..+..
T Consensus 169 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 213 (338)
T 3ro2_A 169 NLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIA 213 (338)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9876221 1123334447888889999998888877665543
No 156
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.40 E-value=7.3e-13 Score=139.50 Aligned_cols=246 Identities=14% Similarity=0.048 Sum_probs=152.7
Q ss_pred CHHHHHHHhHhCCccEEEeCCCCCCCCcchhhccCCcceeEecccCCCC-----CCCCCccEEEecCCCCCCCccCC-Cc
Q 007075 252 DEKKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNT-----TGLPTIDYRITDSLADPPETKQK-HV 325 (619)
Q Consensus 252 ~~~~~~~~i~~d~~Dilvdl~g~t~~~r~~~~a~r~Apvq~~~~G~p~t-----tg~~~~Dy~i~d~~~~p~~~~~~-~~ 325 (619)
....+.+.|++.++||++-...+...+.+. .+.+ |+-+. .+.... .-+..+|.+++-.-.+-...... ..
T Consensus 99 ~~~~l~~~l~~~~pDiv~~~~~~~~~~~~~-~~~~--p~~~~-~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~~g~~ 174 (374)
T 2xci_A 99 NPFSVKRFEELSKPKALIVVEREFWPSLII-FTKV--PKILV-NAYAKGSLIEKILSKKFDLIIMRTQEDVEKFKTFGAK 174 (374)
T ss_dssp SHHHHHHHHHHHCCSEEEEESCCCCHHHHH-HCCS--CEEEE-EECCCCCHHHHHHHTTCSEEEESCHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHhCCCEEEEECccCcHHHHH-HHhC--CEEEE-EeecCchHHHHHHHHhCCEEEECCHHHHHHHHHcCCC
Confidence 346788999999999998543222222221 1223 65332 222110 01245777765220000000011 22
Q ss_pred cceEEcCCCccccCCCCCCCCCCCCCCCCCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHH-HH
Q 007075 326 EELIRLPECFLCYTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVR-HR 404 (619)
Q Consensus 326 E~l~~lp~~~~~~~p~~~~~~~~~~~~l~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~-~~ 404 (619)
++..+|+.. |.+.... .. .+.. .+ +...++..|..+.++++|.++.++.|+.+|+|+|.+ +.+ +.
T Consensus 175 -ki~vi~n~~--f~~~~~~---~~--~l~~-~v-i~~~~~~~k~~~~ll~A~~~l~~~~p~~~lvivG~g----~~~~~~ 240 (374)
T 2xci_A 175 -RVFSCGNLK--FICQKGK---GI--KLKG-EF-IVAGSIHTGEVEIILKAFKEIKKTYSSLKLILVPRH----IENAKI 240 (374)
T ss_dssp -SEEECCCGG--GCCCCCS---CC--CCSS-CE-EEEEEECGGGHHHHHHHHHHHHTTCTTCEEEEEESS----GGGHHH
T ss_pred -eEEEcCCCc--cCCCcCh---hh--hhcC-CE-EEEEeCCCchHHHHHHHHHHHHhhCCCcEEEEECCC----HHHHHH
Confidence 788888753 4332211 11 1222 23 333345678889999999999999999999999965 444 57
Q ss_pred HHHHHHHcCCCC-------CcEEEcCCccCcHHHHHhcccCcEeecCC-CC-CCchhHHHhhhcCCcEEeccC-Cccccc
Q 007075 405 FLSTLEQLGLES-------LRVDLLPLILLNHDHMQAYSLMDISLDTF-PY-AGTTTTCESLYMGVPCVTMAG-SVHAHN 474 (619)
Q Consensus 405 l~~~~~~~Gi~~-------~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~-~~-~g~~t~~eAl~~GvPvVt~~g-~~~~~r 474 (619)
+++++++.|+.. ++|.|.|. ..|...+|+.+||++-++ .. +||.+++|||+||+|||+.+. ..+..
T Consensus 241 l~~~~~~~gl~~~~~~~~~~~v~~~~~---~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e- 316 (374)
T 2xci_A 241 FEKKARDFGFKTSFFENLEGDVILVDR---FGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVND- 316 (374)
T ss_dssp HHHHHHHTTCCEEETTCCCSSEEECCS---SSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHH-
T ss_pred HHHHHHHCCCceEEecCCCCcEEEECC---HHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHH-
Confidence 888999999862 46888886 357899999999965543 33 568999999999999996321 11111
Q ss_pred hhHHHHHhcCCCccccCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhh
Q 007075 475 VGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMS 522 (619)
Q Consensus 475 ~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~ 522 (619)
....+...|. .+.+.|++++++.+.+|+.| +.+++|+++.|++..
T Consensus 317 -~~~~~~~~G~-l~~~~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~ 361 (374)
T 2xci_A 317 -LKEFLEKEGA-GFEVKNETELVTKLTELLSV-KKEIKVEEKSREIKG 361 (374)
T ss_dssp -HHHHHHHTTC-EEECCSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHH
T ss_pred -HHHHHHHCCC-EEEeCCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHH
Confidence 1111222343 23347999999999999999 999999998887654
No 157
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.40 E-value=8.3e-13 Score=138.57 Aligned_cols=165 Identities=25% Similarity=0.288 Sum_probs=141.2
Q ss_pred HHHHHHHHHcCC--------------------HHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHH
Q 007075 2 YNLGVAYGEMLK--------------------FDMAIVFYELAFHF------NPHCAEACNNLGVIYKDRDNLDKAVECY 55 (619)
Q Consensus 2 ~~lg~~~~~~g~--------------------~~~A~~~~~~al~~------~p~~~~a~~~la~~~~~~g~~~~A~~~~ 55 (619)
+++|.++...|+ +++|+.+|++++.+ .+....++.++|.++...|++++|+.++
T Consensus 131 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 210 (406)
T 3sf4_A 131 YNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAH 210 (406)
T ss_dssp HHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHH
T ss_pred HHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHH
Confidence 578999999999 99999999999986 3445678999999999999999999999
Q ss_pred HHHHhhCCCCH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHH
Q 007075 56 QMALSIKPNFS------QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY------AEAYNNLGVLYRDAGSISLAIDAY 123 (619)
Q Consensus 56 ~~al~l~p~~~------~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~ 123 (619)
++++++.+... .++.++|.++...|++++|+.++++++++.+.. ..++.++|.++...|++++|+.+|
T Consensus 211 ~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 290 (406)
T 3sf4_A 211 EQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYH 290 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 99999865443 389999999999999999999999999987765 778999999999999999999999
Q ss_pred HHHHHhCCCCH----HHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 124 EQCLKIDPDSR----NAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 124 ~~al~~~P~~~----~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
++++++.+... .......++..|...|+++++.+.+++..+..
T Consensus 291 ~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 337 (406)
T 3sf4_A 291 LKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEIS 337 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 99998855432 13334458888999999999998887765543
No 158
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.40 E-value=9.2e-13 Score=119.36 Aligned_cols=106 Identities=20% Similarity=0.260 Sum_probs=65.3
Q ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 007075 10 EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMI 89 (619)
Q Consensus 10 ~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~ 89 (619)
+.+.|++|+..|+++++++|+++++|+++|.++..+++++.+.+..+ .+++|+..|
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~------------------------~~~eAi~~l 69 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQ------------------------MIQEAITKF 69 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHH------------------------HHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHh------------------------HHHHHHHHH
Confidence 34456666666666666666666666666666666655442222110 144666666
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHH
Q 007075 90 EKAIAANPTYAEAYNNLGVLYRDA-----------GSISLAIDAYEQCLKIDPDSRNAGQN 139 (619)
Q Consensus 90 ~~al~~~p~~~~a~~~Lg~~~~~~-----------g~~~eA~~~~~~al~~~P~~~~a~~~ 139 (619)
+++++++|++..+|+++|.+|..+ |++++|+++|++|++++|++......
T Consensus 70 e~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~a 130 (158)
T 1zu2_A 70 EEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKS 130 (158)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 666666666666666666666655 36777777777777777777665554
No 159
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.39 E-value=1e-12 Score=119.11 Aligned_cols=84 Identities=19% Similarity=0.157 Sum_probs=58.5
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 007075 78 VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS----------ISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147 (619)
Q Consensus 78 ~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~----------~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~ 147 (619)
+.+++++|++.++++++++|+++++|+++|.++..+++ +++|+..|+++++++|++..++++ ++.+|.
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~--LG~ay~ 91 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWC--IGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHH--HHHHHH
Confidence 33445555555555555555555555555555555554 579999999999999999999998 556665
Q ss_pred hc-----------CCcHHHHHHHHHHH
Q 007075 148 NE-----------GHDDKLFEAHRDWG 163 (619)
Q Consensus 148 ~~-----------g~~~~a~~~~~~~~ 163 (619)
.. |++++|.+.+++..
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl 118 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAV 118 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHH
Confidence 54 47888887776544
No 160
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.39 E-value=3.1e-12 Score=111.19 Aligned_cols=108 Identities=24% Similarity=0.310 Sum_probs=82.9
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHH
Q 007075 31 CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY-------AEAY 103 (619)
Q Consensus 31 ~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~-------~~a~ 103 (619)
.+..++.+|.++...|++++|+.+|+++++.+|.+..++.++|.++...|++++|+.+++++++..|++ ..++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 356677778888888888888888888888888777778888888888888888888888888777766 7777
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 007075 104 NNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139 (619)
Q Consensus 104 ~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~ 139 (619)
+++|.++...|++++|+.+|+++++..| +......
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~ 117 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKK 117 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHH
Confidence 8888888888888888888888888777 3554444
No 161
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.38 E-value=6.2e-12 Score=127.34 Aligned_cols=164 Identities=6% Similarity=-0.063 Sum_probs=132.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHH
Q 007075 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAE------ACNNLGVIYKDRDNLDKAVECYQMALSIKPNF------SQSLN 70 (619)
Q Consensus 3 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~------a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~ 70 (619)
+.+..+...|++++|+..++++++..+.... .+..+|.++...+++++|+.+|++++++.+.. ..++.
T Consensus 80 ~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~ 159 (293)
T 3u3w_A 80 DQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIEN 159 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHH
Confidence 3466788899999999999999998776654 34468999999999999999999999975432 33789
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHH
Q 007075 71 NLGVVYTVQGKMDAAAEMIEKAIAAN-------PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS----RNAGQN 139 (619)
Q Consensus 71 ~lg~~~~~~g~~~eA~~~~~~al~~~-------p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~----~~a~~~ 139 (619)
++|.+|..+|++++|+.+|+++++.. +....+++++|.+|..+|++++|+.++++++++.+.. ..+...
T Consensus 160 ~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~ 239 (293)
T 3u3w_A 160 AIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLY 239 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 99999999999999999999999632 2234589999999999999999999999999886443 123334
Q ss_pred HHHHHHHhhcCC-cHHHHHHHHHHHHHH
Q 007075 140 RLLAMNYINEGH-DDKLFEAHRDWGKRF 166 (619)
Q Consensus 140 ~~la~~~~~~g~-~~~a~~~~~~~~~~~ 166 (619)
..++.+|...|+ +++|.+.+++....+
T Consensus 240 ~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 240 YQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 448889999995 488888887765544
No 162
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.38 E-value=1.1e-11 Score=118.41 Aligned_cols=127 Identities=24% Similarity=0.285 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 007075 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYR 111 (619)
Q Consensus 32 ~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~ 111 (619)
...++++|.++...|++++|+++|++++ +| ++.++.++|.++...|++++|+.+|+++++.+|+++.+++++|.++.
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~ 82 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY 82 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 3457899999999999999999999995 33 78899999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 007075 112 DAGSISLAIDAYEQCLKIDPDSR----------------NAGQNRLLAMNYINEGHDDKLFEAHRDWG 163 (619)
Q Consensus 112 ~~g~~~eA~~~~~~al~~~P~~~----------------~a~~~~~la~~~~~~g~~~~a~~~~~~~~ 163 (619)
.+|++++|+..|++++++.|++. .++.+ ++..+...|+++++.+.++...
T Consensus 83 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 83 QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYN--IAFMYAKKEEWKKAEEQLALAT 148 (213)
T ss_dssp HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHH--HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHH--HHHHHHHccCHHHHHHHHHHHH
Confidence 99999999999999999988876 56555 7888999999999888776643
No 163
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.38 E-value=7.3e-13 Score=114.64 Aligned_cols=92 Identities=20% Similarity=0.187 Sum_probs=46.2
Q ss_pred cCCHHHHHHHHHHHHHh---CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 007075 11 MLKFDMAIVFYELAFHF---NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87 (619)
Q Consensus 11 ~g~~~~A~~~~~~al~~---~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~ 87 (619)
.|++++|+.+|+++++. +|++..+++++|.++..+|++++|+++|+++++++|+++.++.++|.++...|++++|+.
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 82 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVE 82 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHH
Confidence 34555555555555555 344455555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhCCCCHHH
Q 007075 88 MIEKAIAANPTYAEA 102 (619)
Q Consensus 88 ~~~~al~~~p~~~~a 102 (619)
.++++++..|+++..
T Consensus 83 ~~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 83 LLLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHHCCCHHH
T ss_pred HHHHHHHhCCCcHHH
Confidence 555555555554443
No 164
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.37 E-value=1e-11 Score=107.81 Aligned_cols=113 Identities=17% Similarity=0.228 Sum_probs=105.6
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF-------SQSLNNLG 73 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~-------~~~~~~lg 73 (619)
++.+|..+...|++++|+.+|+++++.+|.+..++.++|.++...|++++|+.++++++++.|++ ..+++++|
T Consensus 7 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la 86 (131)
T 1elr_A 7 EKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIG 86 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999998877 88999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 007075 74 VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114 (619)
Q Consensus 74 ~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g 114 (619)
.++...|++++|+.+|+++++..| +...+..++.+....+
T Consensus 87 ~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 87 NSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 5888888888776544
No 165
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.37 E-value=7.4e-12 Score=126.67 Aligned_cols=137 Identities=10% Similarity=0.049 Sum_probs=128.3
Q ss_pred hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 007075 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106 (619)
Q Consensus 27 ~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~L 106 (619)
..|.+...++.+|..+...|++++|+..|+++++.+|++..+++++|.++..+|++++|+..+++++..+|+....+...
T Consensus 112 ~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~ 191 (287)
T 3qou_A 112 VLPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVA 191 (287)
T ss_dssp HSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHH
T ss_pred HcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHH
Confidence 45999999999999999999999999999999999999999999999999999999999999999999999888788888
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 007075 107 GVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165 (619)
Q Consensus 107 g~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~ 165 (619)
+..+...++.++|+..|+++++.+|++..++.+ ++..+...|++++|.+.+++..+.
T Consensus 192 ~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~--la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 192 QIELLXQAADTPEIQQLQQQVAENPEDAALATQ--LALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccCccHHHHHHHHhcCCccHHHHHH--HHHHHHHcccHHHHHHHHHHHHhc
Confidence 888999999999999999999999999999887 788899999999999988876554
No 166
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.37 E-value=3e-12 Score=115.32 Aligned_cols=131 Identities=25% Similarity=0.265 Sum_probs=110.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHC------AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF------SQSL 69 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~ 69 (619)
+.+|.++...|++++|+.+++++++..+.. ..++.++|.++...|++++|++++++++++.+.. ..++
T Consensus 13 ~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 92 (164)
T 3ro3_A 13 GNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSC 92 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence 578999999999999999999999875432 2588899999999999999999999999875442 5578
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPT------YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~------~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~ 132 (619)
.++|.++...|++++|+.+++++++..+. ...++.++|.++...|++++|++++++++++...
T Consensus 93 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 93 YSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999887432 2567888999999999999999999999887543
No 167
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.37 E-value=1.4e-11 Score=116.27 Aligned_cols=159 Identities=18% Similarity=0.117 Sum_probs=126.0
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHcCC
Q 007075 8 YGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI------KPNFSQSLNNLGVVYTVQGK 81 (619)
Q Consensus 8 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~lg~~~~~~g~ 81 (619)
++..|++++|...++......+....++..+|.++...|++++|+.++++++++ .+....++.++|.++...|+
T Consensus 2 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 81 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGN 81 (203)
T ss_dssp -----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCC
Confidence 457899999999666555544477899999999999999999999999999994 44556789999999999999
Q ss_pred HHHHHHHHHHHHHh---CCC----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHH--HHHHHHHHHHHhhcC
Q 007075 82 MDAAAEMIEKAIAA---NPT----YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP--DSRN--AGQNRLLAMNYINEG 150 (619)
Q Consensus 82 ~~eA~~~~~~al~~---~p~----~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P--~~~~--a~~~~~la~~~~~~g 150 (619)
+++|+.++++++++ .++ ...++.++|.++..+|++++|+.++++++++.+ .+.. +.....++.++...|
T Consensus 82 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 161 (203)
T 3gw4_A 82 WDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEK 161 (203)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCc
Confidence 99999999999998 443 356789999999999999999999999997633 2222 233345788899999
Q ss_pred CcHHHHHHHHHHHHHH
Q 007075 151 HDDKLFEAHRDWGKRF 166 (619)
Q Consensus 151 ~~~~a~~~~~~~~~~~ 166 (619)
+++++.+.+++..+..
T Consensus 162 ~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 162 NLLEAQQHWLRARDIF 177 (203)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999888877665543
No 168
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.36 E-value=4.1e-12 Score=129.73 Aligned_cols=134 Identities=17% Similarity=0.152 Sum_probs=117.9
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPH------CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF------SQS 68 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~------~~~ 68 (619)
|.++|.+|...|++++|+.+|++++++.+. ...++.++|.+|.. |++++|+++|++++++.+.. ..+
T Consensus 79 ~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~ 157 (307)
T 2ifu_A 79 FEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAEL 157 (307)
T ss_dssp HHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHH
Confidence 357899999999999999999999987432 25688999999999 99999999999999987643 568
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 007075 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTY------AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136 (619)
Q Consensus 69 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a 136 (619)
+.++|.+|..+|++++|+.+|++++++.|+. ..++.++|.++..+|++++|+.+|++++ ++|+....
T Consensus 158 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~ 230 (307)
T 2ifu_A 158 IGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGS 230 (307)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCC
Confidence 9999999999999999999999999986654 3478899999999999999999999999 99976543
No 169
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.36 E-value=6.1e-12 Score=132.15 Aligned_cols=151 Identities=19% Similarity=0.152 Sum_probs=125.5
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC------CCHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPH-------CAEACNNLGVIYKDRDNLDKAVECYQMALSIKP------NFSQ 67 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-------~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p------~~~~ 67 (619)
++++|.++...|++++|+.++++++++.+. ...++.++|.++..+|++++|+++|++++++.+ ....
T Consensus 144 ~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 223 (378)
T 3q15_A 144 HFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAI 223 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 368999999999999999999999987432 356889999999999999999999999998743 2245
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HH-HHHH
Q 007075 68 SLNNLGVVYTVQGKMDAAAEMIEKAIA-----ANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS--RN-AGQN 139 (619)
Q Consensus 68 ~~~~lg~~~~~~g~~~eA~~~~~~al~-----~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~--~~-a~~~ 139 (619)
++.++|.+|..+|++++|+.+++++++ .+|....++.++|.++..+|++++|+.++++++++.+.. +. ....
T Consensus 224 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 303 (378)
T 3q15_A 224 SLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELF 303 (378)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 789999999999999999999999999 788889999999999999999999999999999985431 11 1112
Q ss_pred HHHHHHHhhcCC
Q 007075 140 RLLAMNYINEGH 151 (619)
Q Consensus 140 ~~la~~~~~~g~ 151 (619)
..+...|...++
T Consensus 304 ~~l~~ly~~~~~ 315 (378)
T 3q15_A 304 LFLQAVYKETVD 315 (378)
T ss_dssp HHHHHHHSSSCC
T ss_pred HHHHHHHhCCCc
Confidence 234555555555
No 170
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.34 E-value=1.8e-12 Score=131.57 Aligned_cols=163 Identities=25% Similarity=0.296 Sum_probs=138.2
Q ss_pred HHHHHHHHHcCC--------------------HHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHH
Q 007075 2 YNLGVAYGEMLK--------------------FDMAIVFYELAFHF------NPHCAEACNNLGVIYKDRDNLDKAVECY 55 (619)
Q Consensus 2 ~~lg~~~~~~g~--------------------~~~A~~~~~~al~~------~p~~~~a~~~la~~~~~~g~~~~A~~~~ 55 (619)
+++|.++...|+ +++|+.++++++.. .+....++.++|.++...|++++|++++
T Consensus 127 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 206 (338)
T 3ro2_A 127 YNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAH 206 (338)
T ss_dssp HHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 578999999999 99999999999876 3344668999999999999999999999
Q ss_pred HHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHH
Q 007075 56 QMALSIKPNF------SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY------AEAYNNLGVLYRDAGSISLAIDAY 123 (619)
Q Consensus 56 ~~al~l~p~~------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~~~eA~~~~ 123 (619)
++++++.+.. ..++.++|.++...|++++|+.+++++++..+.. ..++..+|.++..+|++++|+.++
T Consensus 207 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 286 (338)
T 3ro2_A 207 EQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYH 286 (338)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999885543 2388999999999999999999999999987765 778999999999999999999999
Q ss_pred HHHHHhCCCCH----HHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 124 EQCLKIDPDSR----NAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 124 ~~al~~~P~~~----~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
++++++.+... .......++..|...|+++++.+.+++..+
T Consensus 287 ~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 331 (338)
T 3ro2_A 287 LKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 331 (338)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 99998755321 133344588889999999999888776544
No 171
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.34 E-value=2.6e-12 Score=111.13 Aligned_cols=96 Identities=11% Similarity=0.171 Sum_probs=86.9
Q ss_pred HcCCHHHHHHHHHHHHhh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 007075 44 DRDNLDKAVECYQMALSI---KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120 (619)
Q Consensus 44 ~~g~~~~A~~~~~~al~l---~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~ 120 (619)
.+|++++|+.+|++++++ +|++..++.++|.++..+|++++|+.+|+++++.+|+++.+++++|.++..+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 68889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHH
Q 007075 121 DAYEQCLKIDPDSRNAGQN 139 (619)
Q Consensus 121 ~~~~~al~~~P~~~~a~~~ 139 (619)
..|+++++..|+++.....
T Consensus 82 ~~~~~al~~~p~~~~~~~~ 100 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSY 100 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHT
T ss_pred HHHHHHHHhCCCcHHHHHH
Confidence 9999999999999876543
No 172
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.34 E-value=1.2e-11 Score=125.13 Aligned_cols=128 Identities=14% Similarity=0.165 Sum_probs=112.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHH---hhCCCCH----HH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHC------AEACNNLGVIYKDRDNLDKAVECYQMAL---SIKPNFS----QS 68 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~la~~~~~~g~~~~A~~~~~~al---~l~p~~~----~~ 68 (619)
+.+|..+...|++++|+.+|+++++..+.. ..+++++|.+|...|++++|+.+|++++ +..|++. .+
T Consensus 119 ~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~ 198 (293)
T 2qfc_A 119 YYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKV 198 (293)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHH
Confidence 457888899999999999999999865443 6689999999999999999999999999 4456543 58
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHh
Q 007075 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPT------YAEAYNNLGVLYRDAGSISLA-IDAYEQCLKI 129 (619)
Q Consensus 69 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~------~~~a~~~Lg~~~~~~g~~~eA-~~~~~~al~~ 129 (619)
++++|.+|..+|++++|+.++++++++.++ ...+++++|.+|..+|++++| ..+|++++.+
T Consensus 199 ~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~ 266 (293)
T 2qfc_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999988643 278899999999999999999 8889999865
No 173
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.33 E-value=5.8e-13 Score=144.89 Aligned_cols=129 Identities=16% Similarity=0.243 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 007075 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYR 111 (619)
Q Consensus 32 ~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~ 111 (619)
+.++.++|.++...|++++|+++|+++++++|++..++.++|.++..+|++++|+.+++++++++|+++.+++++|.+|.
T Consensus 6 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 85 (477)
T 1wao_1 6 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 85 (477)
T ss_dssp HTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45567888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 007075 112 DAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160 (619)
Q Consensus 112 ~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~ 160 (619)
.+|++++|++.|+++++++|++..++.++..+..+...|++++|.+.++
T Consensus 86 ~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 86 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999998888656555777676666655443
No 174
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.33 E-value=7.6e-12 Score=105.57 Aligned_cols=99 Identities=16% Similarity=0.187 Sum_probs=95.8
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN--FSQSLNNLGVVYTV 78 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~--~~~~~~~lg~~~~~ 78 (619)
++.+|.++...|++++|+.+|+++++.+|.+..+++++|.++...|++++|+++++++++++|+ +..++.++|.++..
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~ 88 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY 88 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred c-CCHHHHHHHHHHHHHhCCCC
Q 007075 79 Q-GKMDAAAEMIEKAIAANPTY 99 (619)
Q Consensus 79 ~-g~~~eA~~~~~~al~~~p~~ 99 (619)
. |++++|+++++++++..|..
T Consensus 89 ~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 89 IEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp CSSCSHHHHHHHHHHGGGCCCC
T ss_pred HhCCHHHHHHHHHHHhhcccCC
Confidence 9 99999999999999999875
No 175
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.33 E-value=1.3e-10 Score=118.12 Aligned_cols=142 Identities=11% Similarity=0.048 Sum_probs=131.1
Q ss_pred HHHHHcCCH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHH----HH
Q 007075 6 VAYGEMLKF-DMAIVFYELAFHFNPHCAEACNNLGVIYKDRD--NLDKAVECYQMALSIKPNFSQSLNNLGVVY----TV 78 (619)
Q Consensus 6 ~~~~~~g~~-~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g--~~~~A~~~~~~al~l~p~~~~~~~~lg~~~----~~ 78 (619)
.+..+.|.+ ++|+.++.+++.++|++..+|+..+.++..++ +++++++++.+++..+|++..+|+..+.++ ..
T Consensus 40 ~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~ 119 (306)
T 3dra_A 40 LALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMEL 119 (306)
T ss_dssp HHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHh
Confidence 344566665 68999999999999999999999999999999 999999999999999999999999999999 66
Q ss_pred c---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 007075 79 Q---GKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS--LAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147 (619)
Q Consensus 79 ~---g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~--eA~~~~~~al~~~P~~~~a~~~~~la~~~~ 147 (619)
. +++++++.+++++++.+|++..+|+..+.++...|+++ +++++++++++.+|.+..+|.++...+...
T Consensus 120 l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l 193 (306)
T 3dra_A 120 NNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSK 193 (306)
T ss_dssp TTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSS
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 7 78999999999999999999999999999999999998 999999999999999999999976665443
No 176
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.32 E-value=4e-11 Score=121.98 Aligned_cols=144 Identities=10% Similarity=-0.022 Sum_probs=135.2
Q ss_pred CHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCcHHHHHHHHHHH----HHc---CCHHHHHHHHHHHHhhCCCCHHHHHH
Q 007075 1 MYNLGVAYGEML--KFDMAIVFYELAFHFNPHCAEACNNLGVIY----KDR---DNLDKAVECYQMALSIKPNFSQSLNN 71 (619)
Q Consensus 1 ~~~lg~~~~~~g--~~~~A~~~~~~al~~~p~~~~a~~~la~~~----~~~---g~~~~A~~~~~~al~l~p~~~~~~~~ 71 (619)
|+..+.++...+ ++++++.++++++..+|++..+|+..+.++ ... ++++++++++.++++.+|.+..+|..
T Consensus 70 Wn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~ 149 (306)
T 3dra_A 70 WIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSY 149 (306)
T ss_dssp HHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 467788888899 999999999999999999999999999999 777 89999999999999999999999999
Q ss_pred HHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 007075 72 LGVVYTVQGKMD--AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS------ISLAIDAYEQCLKIDPDSRNAGQNRLLA 143 (619)
Q Consensus 72 lg~~~~~~g~~~--eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~------~~eA~~~~~~al~~~P~~~~a~~~~~la 143 (619)
.+.++...|+++ +++++++++++.+|.+..+|++.+.++...++ ++++++++++++..+|++..+|.++...
T Consensus 150 R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~l 229 (306)
T 3dra_A 150 RKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGI 229 (306)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHH
Confidence 999999999999 99999999999999999999999999999988 9999999999999999999999885443
Q ss_pred H
Q 007075 144 M 144 (619)
Q Consensus 144 ~ 144 (619)
+
T Consensus 230 l 230 (306)
T 3dra_A 230 H 230 (306)
T ss_dssp H
T ss_pred H
Confidence 3
No 177
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.32 E-value=3.1e-11 Score=132.82 Aligned_cols=160 Identities=14% Similarity=0.031 Sum_probs=140.8
Q ss_pred CHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 007075 1 MYNLGVAYGE-------MLKFD-------MAIVFYELAFH-FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65 (619)
Q Consensus 1 ~~~lg~~~~~-------~g~~~-------~A~~~~~~al~-~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~ 65 (619)
|+++|..+.. .|+++ +|+..|+++++ ..|++..+|..+|.++...|++++|.+.|++++++.|.+
T Consensus 275 w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 354 (530)
T 2ooe_A 275 WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDID 354 (530)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccC
Confidence 3566777665 79987 99999999997 899999999999999999999999999999999999998
Q ss_pred H-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 007075 66 S-QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL-YRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143 (619)
Q Consensus 66 ~-~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~-~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la 143 (619)
+ .+|.+++.++...|++++|+..|+++++..|.....+...+.+ +...|++++|...|+++++..|+++..+.+ ++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~--~~ 432 (530)
T 2ooe_A 355 PTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLA--YI 432 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHH--HH
T ss_pred chHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHH--HH
Confidence 5 6999999999999999999999999999999887777776665 446999999999999999999999988866 66
Q ss_pred HHHhhcCCcHHHHHHHHHH
Q 007075 144 MNYINEGHDDKLFEAHRDW 162 (619)
Q Consensus 144 ~~~~~~g~~~~a~~~~~~~ 162 (619)
..+...|+.+++...+++.
T Consensus 433 ~~~~~~g~~~~Ar~~~~~a 451 (530)
T 2ooe_A 433 DYLSHLNEDNNTRVLFERV 451 (530)
T ss_dssp HHHTTTTCHHHHHHHHHHH
T ss_pred HHHHhCCCHhhHHHHHHHH
Confidence 6777889988887776654
No 178
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.32 E-value=6e-12 Score=127.46 Aligned_cols=127 Identities=13% Similarity=0.128 Sum_probs=110.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------CCCCHHHH
Q 007075 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHC------AEACNNLGVIYKDRDNLDKAVECYQMALSI-------KPNFSQSL 69 (619)
Q Consensus 3 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~la~~~~~~g~~~~A~~~~~~al~l-------~p~~~~~~ 69 (619)
.+|..+...+++++|+.+|++++...+.. ..++.++|.+|..+|++++|+.+|+++++. .+....++
T Consensus 120 ~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 199 (293)
T 3u3w_A 120 YVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHH
Confidence 47888888899999999999999964332 447999999999999999999999999953 22334588
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHh
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTY------AEAYNNLGVLYRDAGS-ISLAIDAYEQCLKI 129 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~a~~~Lg~~~~~~g~-~~eA~~~~~~al~~ 129 (619)
+++|.+|..+|++++|+.++++++++.+.. ..+++++|.+|..+|+ +++|+++|++++.+
T Consensus 200 ~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 200 YNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999986543 7899999999999995 69999999999875
No 179
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.32 E-value=1.2e-11 Score=129.97 Aligned_cols=117 Identities=15% Similarity=0.220 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh----------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 32 AEACNNLGVIYKDRDNLDKAVECYQMALS----------------IKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95 (619)
Q Consensus 32 ~~a~~~la~~~~~~g~~~~A~~~~~~al~----------------l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~ 95 (619)
...+..+|..+...|++++|+++|+++++ ++|.+..++.++|.+|..+|++++|+.++++++++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999 77888899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcC
Q 007075 96 NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEG 150 (619)
Q Consensus 96 ~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g 150 (619)
+|+++.+++++|.+|..+|++++|+..|+++++++|++..++.. ++..+...+
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~--l~~~~~~~~ 355 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAE--LLKVKQKIK 355 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHHH
Confidence 99999999999999999999999999999999999999887766 444444333
No 180
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.31 E-value=1.7e-11 Score=132.86 Aligned_cols=175 Identities=15% Similarity=0.063 Sum_probs=129.0
Q ss_pred CCeEEEecCCC--CcCCHHHHHHHHHHHHHCCC----ceEEEeccCCC-CHH----HHHHHHHHHHHc----CCC-CCcE
Q 007075 356 GFITFGSFNNL--AKITPKVLQVWARILCAVPN----SRLVVKCKPFC-CDS----VRHRFLSTLEQL----GLE-SLRV 419 (619)
Q Consensus 356 ~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~----a~l~l~g~~~~-~~~----~~~~l~~~~~~~----Gi~-~~rv 419 (619)
+..++.+++|+ .|..+..++++.+++++.|+ .+|+++|.+.. +.+ +++++++.+.+. |.. -..|
T Consensus 254 ~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v 333 (482)
T 1uqt_A 254 NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPL 333 (482)
T ss_dssp TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSE
T ss_pred CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceE
Confidence 45678888998 69999999999999999986 67888886532 122 455555555442 322 1246
Q ss_pred E-EcCCccCcHHHHHhcccCcEeecCCCC-CCchhHHHhhhcCC-----cEEeccCCccccchhHHHHHhcCCCcccc--
Q 007075 420 D-LLPLILLNHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMGV-----PCVTMAGSVHAHNVGVSLLTKVGLKHLIA-- 490 (619)
Q Consensus 420 ~-f~g~~~~~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~Gv-----PvVt~~g~~~~~r~~~~~l~~~gl~~~v~-- 490 (619)
+ |.|.++ ..+..++|+.|||||-|+.+ +.|.+++|||+||+ |||+..... ++..+ . .+++.
T Consensus 334 ~~~~g~v~-~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G-----~~~~l---~-~g~lv~p 403 (482)
T 1uqt_A 334 YYLNQHFD-RKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG-----AANEL---T-SALIVNP 403 (482)
T ss_dssp EEECSCCC-HHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG-----GGGTC---T-TSEEECT
T ss_pred EEeCCCCC-HHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC-----CHHHh---C-CeEEECC
Confidence 6 467777 78999999999999999977 77999999999997 777533110 11122 1 33443
Q ss_pred CCHHHHHHHHHHhhcC-HHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Q 007075 491 KNEDEYVQLALQLASD-VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543 (619)
Q Consensus 491 ~~~~~y~~~a~~L~~d-~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~ 543 (619)
.|.+++++.+.+++++ ++.++++.+++++++.. ||++.+++.+.+.|+++
T Consensus 404 ~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~---~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVK---NDINHWQECFISDLKQI 454 (482)
T ss_dssp TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhc
Confidence 5899999999999984 67788888888887643 79999999999999764
No 181
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.31 E-value=8.8e-13 Score=140.67 Aligned_cols=158 Identities=9% Similarity=-0.007 Sum_probs=112.5
Q ss_pred EEecCCC---CcCCHHHHHHHHHHHHHCCC---ceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHH
Q 007075 360 FGSFNNL---AKITPKVLQVWARILCAVPN---SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQ 433 (619)
Q Consensus 360 f~~~~~~---~K~~~~~~~~~~~il~~~P~---a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~ 433 (619)
+..++|+ .|..+.+++++..+.++.|+ .+|+++|.+... .++|+. ++|+|+|.++ .++...
T Consensus 244 il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-----------~~l~~~-~~v~f~G~~~-~~~l~~ 310 (413)
T 2x0d_A 244 ILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-----------IALGKG-IHLNSLGKLT-LEDYAD 310 (413)
T ss_dssp EEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-----------EEEETT-EEEEEEESCC-HHHHHH
T ss_pred EEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-----------hhcCCc-CcEEEcCCCC-HHHHHH
Confidence 4444554 58888999999999988886 799999976321 356776 8999999997 689999
Q ss_pred hcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCcc-c-cCCHHHHHHHHHHhhcCHHHH
Q 007075 434 AYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHL-I-AKNEDEYVQLALQLASDVTAL 510 (619)
Q Consensus 434 ~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~-v-~~~~~~y~~~a~~L~~d~~~~ 510 (619)
+|+.||||+.|+.+ +.|++++|||+||+|||+..|.. . .++ .-|..++ + ..|++++++.+.+|+.|++++
T Consensus 311 ~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~~g~-~-----e~v-~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~ 383 (413)
T 2x0d_A 311 LLKRSSIGISLMISPHPSYPPLEMAHFGLRVITNKYEN-K-----DLS-NWHSNIVSLEQLNPENIAETLVELCMSFNNR 383 (413)
T ss_dssp HHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEECBTT-B-----CGG-GTBTTEEEESSCSHHHHHHHHHHHHHHTC--
T ss_pred HHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEeCCCc-c-----hhh-hcCCCEEEeCCCCHHHHHHHHHHHHcCHHHH
Confidence 99999999999975 88999999999999999844421 1 112 2244454 3 368999999999999998777
Q ss_pred HHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHH
Q 007075 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544 (619)
Q Consensus 511 ~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~ 544 (619)
++ +.++ ....|+|+..+++ .+.|++++
T Consensus 384 ~~---~~~~---~~~~~~W~~~~~~-~~~~~~l~ 410 (413)
T 2x0d_A 384 DV---DKKE---SSNMMFYINEFNE-FSFIKEIE 410 (413)
T ss_dssp --------C---CBSCGGGCCCC----TTHHHHH
T ss_pred HH---hHHH---HHHhCCHHHHHHH-HHHHHHHH
Confidence 65 2222 2235888887766 55565554
No 182
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.31 E-value=1.4e-11 Score=114.33 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=107.8
Q ss_pred HHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHcCCH--HH
Q 007075 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL-YRDAGSI--SL 118 (619)
Q Consensus 42 ~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~-~~~~g~~--~e 118 (619)
+...|++++|++.++++++.+|++..++..+|.++...|++++|+.+|+++++++|+++.++.++|.+ +...|++ ++
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~ 99 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQ 99 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHH
Confidence 34578999999999999999999999999999999999999999999999999999999999999999 8899999 99
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 119 AIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 119 A~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
|+..|+++++.+|++..++.+ ++..|...|+++++...+++..+
T Consensus 100 A~~~~~~al~~~p~~~~~~~~--la~~~~~~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 100 TRAMIDKALALDSNEITALML--LASDAFMQANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHH--HHHHHHHcccHHHHHHHHHHHHh
Confidence 999999999999999888776 78889999999998887776543
No 183
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.31 E-value=1.1e-11 Score=125.07 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=102.6
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 007075 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108 (619)
Q Consensus 29 p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~ 108 (619)
|.++.++..+|..+...|++++|+.+|+++++++|++..++.++|.++..+|++++|+..++++++++|++..+++++|.
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH
Q 007075 109 LYRDAGSISLAIDAYEQCLKIDPDSR 134 (619)
Q Consensus 109 ~~~~~g~~~eA~~~~~~al~~~P~~~ 134 (619)
+|..+|++++|+..|+++++++|++.
T Consensus 81 ~~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 81 CQLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCccch
Confidence 99999999999999999999998763
No 184
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.30 E-value=9e-12 Score=117.65 Aligned_cols=130 Identities=21% Similarity=0.241 Sum_probs=113.4
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHH------hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---CCC----CHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFH------FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI---KPN----FSQ 67 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~------~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l---~p~----~~~ 67 (619)
++.+|.++...|++++|+.+|+++++ ..+....++.++|.++...|++++|++++++++++ .++ ...
T Consensus 29 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 108 (203)
T 3gw4_A 29 RFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASA 108 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHH
Confidence 36789999999999999999999998 34456788999999999999999999999999998 443 345
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 007075 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPT--Y----AEAYNNLGVLYRDAGSISLAIDAYEQCLKID 130 (619)
Q Consensus 68 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~--~----~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~ 130 (619)
++.++|.++...|++++|+.++++++++.+. + ..++.++|.++..+|++++|+.++++++++.
T Consensus 109 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 109 NAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999976432 2 3457899999999999999999999998874
No 185
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.30 E-value=3.3e-12 Score=134.46 Aligned_cols=170 Identities=12% Similarity=0.048 Sum_probs=125.3
Q ss_pred CCCeEEEecCCCC---cCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHH
Q 007075 355 NGFITFGSFNNLA---KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431 (619)
Q Consensus 355 ~~~~~f~~~~~~~---K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~ 431 (619)
++.+++++++++. |..+.+++++.++.++.|+.+|++.+++ .+..++.+++.+ +.. ++|+|+|.++ ..+.
T Consensus 204 ~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~--~~~~~~~l~~~~---~~~-~~v~~~g~~~-~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHL--NPNVREPVNRIL---GHV-KNVILIDPQE-YLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCB--CHHHHHHHHHHH---TTC-TTEEEECCCC-HHHH
T ss_pred CCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCC--CHHHHHHHHHHh---hcC-CCEEEeCCCC-HHHH
Confidence 4556788888764 7778999999999999999999885332 223556665554 223 6899998876 5789
Q ss_pred HHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccC-CccccchhHHHHHhcCCCcc-ccCCHHHHHHHHHHhhcCHHH
Q 007075 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAG-SVHAHNVGVSLLTKVGLKHL-IAKNEDEYVQLALQLASDVTA 509 (619)
Q Consensus 432 ~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g-~~~~~r~~~~~l~~~gl~~~-v~~~~~~y~~~a~~L~~d~~~ 509 (619)
..+|..||+++-++ |+ +++|||++|+|||+... . +..-+...| .++ +..|++++++.+.+++.|++.
T Consensus 277 ~~~~~~ad~~v~~S---g~-~~lEA~a~G~PvI~~~~~~------~~~e~v~~g-~g~lv~~d~~~la~~i~~ll~d~~~ 345 (384)
T 1vgv_A 277 VWLMNHAWLILTDS---GG-IQEEAPSLGKPVLVMRDTT------ERPEAVTAG-TVRLVGTDKQRIVEEVTRLLKDENE 345 (384)
T ss_dssp HHHHHHCSEEEESS---ST-GGGTGGGGTCCEEEESSCC------SCHHHHHHT-SEEEECSSHHHHHHHHHHHHHCHHH
T ss_pred HHHHHhCcEEEECC---cc-hHHHHHHcCCCEEEccCCC------CcchhhhCC-ceEEeCCCHHHHHHHHHHHHhChHH
Confidence 99999999999887 33 48999999999997642 1 111122336 444 436999999999999999998
Q ss_pred HHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHH
Q 007075 510 LANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWH 545 (619)
Q Consensus 510 ~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~ 545 (619)
++++++..++. ...|+++++++.+++.|.+...
T Consensus 346 ~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 346 YQAMSRAHNPY---GDGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp HHHHHSSCCTT---CCSCHHHHHHHHHHHTCCCC--
T ss_pred HhhhhhccCCC---cCCCHHHHHHHHHHHHHHhhcc
Confidence 88888765432 3458899999999888776543
No 186
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.29 E-value=3e-11 Score=133.93 Aligned_cols=140 Identities=10% Similarity=0.069 Sum_probs=132.6
Q ss_pred CHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHH
Q 007075 1 MYNLGVAYGEMLK----------FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRD--NLDKAVECYQMALSIKPNFSQS 68 (619)
Q Consensus 1 ~~~lg~~~~~~g~----------~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g--~~~~A~~~~~~al~l~p~~~~~ 68 (619)
|+..+.++...++ +++++++++++++.+|++..+|+..+.++...+ ++++|++++.++++++|.+..+
T Consensus 66 W~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~a 145 (567)
T 1dce_A 66 WNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHC 145 (567)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccH
Confidence 4667888888888 999999999999999999999999999999999 7799999999999999999999
Q ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHhCCCC
Q 007075 69 LNNLGVVYTVQG-KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA--------------GSISLAIDAYEQCLKIDPDS 133 (619)
Q Consensus 69 ~~~lg~~~~~~g-~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~--------------g~~~eA~~~~~~al~~~P~~ 133 (619)
|...+.++...| .+++++++++++++.+|++..+|++++.++..+ +.+++|++++.+++.++|++
T Consensus 146 W~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~ 225 (567)
T 1dce_A 146 WDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPND 225 (567)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999 999999999999999999999999999999885 56899999999999999999
Q ss_pred HHHHHHH
Q 007075 134 RNAGQNR 140 (619)
Q Consensus 134 ~~a~~~~ 140 (619)
..+|.++
T Consensus 226 ~saW~y~ 232 (567)
T 1dce_A 226 QSAWFYH 232 (567)
T ss_dssp SHHHHHH
T ss_pred ccHHHHH
Confidence 9999884
No 187
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.28 E-value=8.4e-12 Score=130.79 Aligned_cols=166 Identities=14% Similarity=0.114 Sum_probs=121.9
Q ss_pred CCCCeEEEecCCCC---cCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHH
Q 007075 354 TNGFITFGSFNNLA---KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430 (619)
Q Consensus 354 ~~~~~~f~~~~~~~---K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~ 430 (619)
+++.++++++++.. |..+.++++|.++.++.|+.++++ +.+. ...+++.+++.+ +.. ++|+|+|.++ ..+
T Consensus 203 ~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~-~~~~~~~~~~~~---~~~-~~v~~~g~~~-~~~ 275 (375)
T 3beo_A 203 GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHM-NPVVRETANDIL---GDY-GRIHLIEPLD-VID 275 (375)
T ss_dssp TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCS-CHHHHHHHHHHH---TTC-TTEEEECCCC-HHH
T ss_pred cCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCC-CHHHHHHHHHHh---hcc-CCEEEeCCCC-HHH
Confidence 35566788888874 888999999999998899999766 3331 233344444432 333 6899999887 568
Q ss_pred HHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEecc--CCccccchhHHHHHhcCCCccc-cCCHHHHHHHHHHhhcCH
Q 007075 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMA--GSVHAHNVGVSLLTKVGLKHLI-AKNEDEYVQLALQLASDV 507 (619)
Q Consensus 431 ~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~--g~~~~~r~~~~~l~~~gl~~~v-~~~~~~y~~~a~~L~~d~ 507 (619)
...+|..+|+++-|+ |.+++|||++|+|||+.. |. . ..++ ..| .+++ ..|++++++.+.+++.|+
T Consensus 276 ~~~~~~~ad~~v~~s----g~~~lEA~a~G~Pvi~~~~~~~-~-----~e~v-~~g-~g~~v~~d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 276 FHNVAARSYLMLTDS----GGVQEEAPSLGVPVLVLRDTTE-R-----PEGI-EAG-TLKLAGTDEETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHHTCSEEEECC----HHHHHHHHHHTCCEEECSSCCS-C-----HHHH-HTT-SEEECCSCHHHHHHHHHHHHHCH
T ss_pred HHHHHHhCcEEEECC----CChHHHHHhcCCCEEEecCCCC-C-----ceee-cCC-ceEEcCCCHHHHHHHHHHHHhCh
Confidence 999999999999776 566999999999999763 22 1 1222 335 4444 379999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 007075 508 TALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541 (619)
Q Consensus 508 ~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~ 541 (619)
+.+++++++.++. ...|+++++++.+++.+.
T Consensus 344 ~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 344 EAHDKMSKASNPY---GDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHCCCCCTT---CCSCHHHHHHHHHHHHTT
T ss_pred HhHhhhhhcCCCC---CCCcHHHHHHHHHHHHhh
Confidence 9888887765443 235889999998887653
No 188
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.28 E-value=8.6e-11 Score=129.29 Aligned_cols=165 Identities=7% Similarity=-0.009 Sum_probs=140.2
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH-HHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCA-EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVV-YTV 78 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~-~~~ 78 (619)
|+.+|..+...|++++|...|+++++.+|.++ .+|.+++.++...|++++|.++|++|++..|.....+...+.+ +..
T Consensus 324 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~ 403 (530)
T 2ooe_A 324 YFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYC 403 (530)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 35788899999999999999999999999985 6999999999999999999999999999999887777776665 346
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHhhcCCcHH
Q 007075 79 QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN----AGQNRLLAMNYINEGHDDK 154 (619)
Q Consensus 79 ~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~----a~~~~~la~~~~~~g~~~~ 154 (619)
.|++++|..+|+++++..|+++.+|..++.++...|+.++|...|+++++..|.++. .+.. ........|+.+.
T Consensus 404 ~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~--~~~~e~~~G~~~~ 481 (530)
T 2ooe_A 404 SKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWAR--FLAFESNIGDLAS 481 (530)
T ss_dssp TCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHH--HHHHHHHSSCHHH
T ss_pred cCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHH--HHHHHHHcCCHHH
Confidence 999999999999999999999999999999999999999999999999999876654 4433 2333456688887
Q ss_pred HHHHHHHHHHHHH
Q 007075 155 LFEAHRDWGKRFM 167 (619)
Q Consensus 155 a~~~~~~~~~~~~ 167 (619)
+....++..+.++
T Consensus 482 ~~~~~~r~~~~~p 494 (530)
T 2ooe_A 482 ILKVEKRRFTAFR 494 (530)
T ss_dssp HHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHCc
Confidence 7766665555443
No 189
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.27 E-value=6e-12 Score=134.02 Aligned_cols=167 Identities=10% Similarity=0.014 Sum_probs=123.4
Q ss_pred ceEEcCCCccc--cCCCCCCCCCCCCCCCCCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHH
Q 007075 327 ELIRLPECFLC--YTPSPEAGPVCPTPALTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHR 404 (619)
Q Consensus 327 ~l~~lp~~~~~--~~p~~~~~~~~~~~~l~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~ 404 (619)
++..+|++... |.|.... ..++..+++.++++.+. ..+ +..+.+..|+.+|+|+|.| +
T Consensus 198 ~i~vipngvd~~~f~~~~~~--------~~~~~~~i~~vGrl~~~-Kg~---~~~l~~~~~~~~l~ivG~g----~---- 257 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS--------PYAEGIHAVAVGSMLFD-PEF---FVVASKAFPQVTFHVIGSG----M---- 257 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC--------SCCSSEEEEEECCTTBC-HHH---HHHHHHHCTTEEEEEESCS----S----
T ss_pred CEEEEcCCcChHhcCccccc--------ccCCCcEEEEEeccccc-cCH---HHHHHHhCCCeEEEEEeCc----h----
Confidence 78889975321 2221110 12333678888998432 122 6677778999999999976 2
Q ss_pred HHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCC-CCchhHHHhh-------hcCCcEEeccCCccccchh
Q 007075 405 FLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPY-AGTTTTCESL-------YMGVPCVTMAGSVHAHNVG 476 (619)
Q Consensus 405 l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl-------~~GvPvVt~~g~~~~~r~~ 476 (619)
++++|+. ++|+|+|.++ .++...+|+.+|+++-|+.+ ++|++++||| +||+|||+...
T Consensus 258 ----~~~~~l~-~~V~f~G~~~-~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~-------- 323 (406)
T 2hy7_A 258 ----GRHPGYG-DNVIVYGEMK-HAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA-------- 323 (406)
T ss_dssp ----CCCTTCC-TTEEEECCCC-HHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG--------
T ss_pred ----HHhcCCC-CCEEEcCCCC-HHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh--------
Confidence 4567887 8999999998 68899999999999999976 7799999999 99999998432
Q ss_pred HHHHHhcCCCccc---cCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHH--HHHH
Q 007075 477 VSLLTKVGLKHLI---AKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLEST--YRNM 543 (619)
Q Consensus 477 ~~~l~~~gl~~~v---~~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~--y~~~ 543 (619)
+. -|..+++ ..|++++++...+++.|++ + .....|+|+.++++++++ |+++
T Consensus 324 ---v~-~~~~G~l~v~~~d~~~la~ai~~ll~~~~---------~---~~~~~~sw~~~a~~~~~~~~y~~~ 379 (406)
T 2hy7_A 324 ---VV-GPYKSRFGYTPGNADSVIAAITQALEAPR---------V---RYRQCLNWSDTTDRVLDPRAYPET 379 (406)
T ss_dssp ---GT-CSCSSEEEECTTCHHHHHHHHHHHHHCCC---------C---CCSCCCBHHHHHHHHHCGGGSGGG
T ss_pred ---cc-cCcceEEEeCCCCHHHHHHHHHHHHhCcc---------h---hhhhcCCHHHHHHHHHHhhccccc
Confidence 11 1333444 3689999999999999886 1 224569999999999998 7654
No 190
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.27 E-value=2.2e-11 Score=121.50 Aligned_cols=134 Identities=13% Similarity=0.066 Sum_probs=119.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHHcC
Q 007075 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF--SQSLNNLGVVYTVQG 80 (619)
Q Consensus 3 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~--~~~~~~lg~~~~~~g 80 (619)
.++..+...|+|++|.+.|+..+...|++. +++.+|.++.+.+++++|+.+|+++.+..+.. ..+++++|.++..+|
T Consensus 107 ayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG 185 (282)
T 4f3v_A 107 GFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLA 185 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCC
Confidence 467889999999999999999999999988 99999999999999999999999887754222 358999999999999
Q ss_pred CHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 007075 81 KMDAAAEMIEKAIAAN--PT-YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~--p~-~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~ 138 (619)
++++|+.+|++++... |. .+++++++|.++..+|+.++|...|++++..+|+ ..+..
T Consensus 186 ~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~ 245 (282)
T 4f3v_A 186 LFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAA 245 (282)
T ss_dssp CHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHH
T ss_pred CHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHH
Confidence 9999999999998654 55 6679999999999999999999999999999999 65543
No 191
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.25 E-value=1.2e-10 Score=121.61 Aligned_cols=163 Identities=15% Similarity=0.018 Sum_probs=136.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH------HHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCA-----EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS------QSLN 70 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-----~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~------~~~~ 70 (619)
..+|.++...|++++|+.++++++...|... .++.++|.++...|++++|.+.+++++++.+... .++.
T Consensus 18 ~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 97 (373)
T 1hz4_A 18 ALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLI 97 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 3578889999999999999999999877542 3688999999999999999999999999755332 3478
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHH
Q 007075 71 NLGVVYTVQGKMDAAAEMIEKAIAAN--------PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSR---NAGQN 139 (619)
Q Consensus 71 ~lg~~~~~~g~~~eA~~~~~~al~~~--------p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~---~a~~~ 139 (619)
++|.++..+|++++|+.++++++++. |....++.++|.++...|++++|..++++++++.+... .....
T Consensus 98 ~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 177 (373)
T 1hz4_A 98 QQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCL 177 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHH
Confidence 89999999999999999999999875 33456788999999999999999999999999887532 22334
Q ss_pred HHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 140 RLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 140 ~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
..++.++...|+++++.+.+++...
T Consensus 178 ~~la~~~~~~g~~~~A~~~l~~a~~ 202 (373)
T 1hz4_A 178 AMLIQCSLARGDLDNARSQLNRLEN 202 (373)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4578888999999998887776543
No 192
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.25 E-value=1.5e-10 Score=128.19 Aligned_cols=141 Identities=7% Similarity=0.060 Sum_probs=130.8
Q ss_pred HHHHcCCH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 007075 7 AYGEMLKF-DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN----------LDKAVECYQMALSIKPNFSQSLNNLGVV 75 (619)
Q Consensus 7 ~~~~~g~~-~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~----------~~~A~~~~~~al~l~p~~~~~~~~lg~~ 75 (619)
...+.|++ ++|++.+++++..+|++..+|+..+.++...++ +++|++.++++++.+|++..+|...+.+
T Consensus 37 ~~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~ 116 (567)
T 1dce_A 37 QKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWL 116 (567)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34455654 578999999999999999999999999999988 9999999999999999999999999999
Q ss_pred HHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 007075 76 YTVQG--KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG-SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147 (619)
Q Consensus 76 ~~~~g--~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g-~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~ 147 (619)
+...+ ++++|+++++++++.+|.+..+|+..+.++...| .+++++++++++++.+|++..+|.++...+..+
T Consensus 117 l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 117 LSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 99999 7799999999999999999999999999999999 999999999999999999999999977665543
No 193
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.24 E-value=3e-10 Score=116.32 Aligned_cols=139 Identities=9% Similarity=0.061 Sum_probs=127.5
Q ss_pred HHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC--HHHHHHHHHHHHhhCCCCHHHH
Q 007075 2 YNLGVAYGEMLK----------FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDN--LDKAVECYQMALSIKPNFSQSL 69 (619)
Q Consensus 2 ~~lg~~~~~~g~----------~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~--~~~A~~~~~~al~l~p~~~~~~ 69 (619)
+..+.++...++ +++++.++++++..+|++..+|+..+.++...++ ++++++++.++++.+|.+..+|
T Consensus 68 n~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW 147 (331)
T 3dss_A 68 NCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCW 147 (331)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHH
Confidence 345555655554 7899999999999999999999999999999994 9999999999999999999999
Q ss_pred HHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHhCCCCH
Q 007075 70 NNLGVVYTVQGK-MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA--------------GSISLAIDAYEQCLKIDPDSR 134 (619)
Q Consensus 70 ~~lg~~~~~~g~-~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~--------------g~~~eA~~~~~~al~~~P~~~ 134 (619)
...+.++...|. ++++++++.++++.+|.+..+|++++.++... +.++++++++.+++..+|++.
T Consensus 148 ~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 148 DYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 999999999999 69999999999999999999999999999988 568999999999999999999
Q ss_pred HHHHHH
Q 007075 135 NAGQNR 140 (619)
Q Consensus 135 ~a~~~~ 140 (619)
.+|+++
T Consensus 228 SaW~Y~ 233 (331)
T 3dss_A 228 SAWFYH 233 (331)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999764
No 194
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.24 E-value=6.1e-11 Score=118.29 Aligned_cols=160 Identities=12% Similarity=0.064 Sum_probs=132.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH-------------------------------------------
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNL------------------------------------------- 38 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l------------------------------------------- 38 (619)
|..|.-+ ..+++.+|..+|.++++++|+..++|.++
T Consensus 11 ~~~~~~~-~~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g 89 (282)
T 4f3v_A 11 FESAVSM-LPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGG 89 (282)
T ss_dssp HHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCT
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCC
Confidence 4456665 58999999999999999999999999866
Q ss_pred -------------------HHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 007075 39 -------------------GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY 99 (619)
Q Consensus 39 -------------------a~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~ 99 (619)
+.++...|++++|.+.|+.++...|++. ..+.+|.++++.++|++|+.+|+++.+..+..
T Consensus 90 ~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~ 168 (282)
T 4f3v_A 90 LYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKF 168 (282)
T ss_dssp TTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHH
T ss_pred cccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcc
Confidence 3566778899999999999998899888 99999999999999999999999876653222
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 007075 100 --AEAYNNLGVLYRDAGSISLAIDAYEQCLKID--PD-SRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165 (619)
Q Consensus 100 --~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~--P~-~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~ 165 (619)
..+++++|.++..+|++++|+.+|++++... |. ...+.++ +++++...|+.+++.+.+++....
T Consensus 169 ~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~--~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 169 LAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWY--LAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHH--HHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHH--HHHHHHHcCCHHHHHHHHHHHHhc
Confidence 3589999999999999999999999998654 54 4456665 777888999999998888776544
No 195
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.23 E-value=6.3e-11 Score=114.08 Aligned_cols=126 Identities=13% Similarity=0.019 Sum_probs=114.8
Q ss_pred HHHHHHHHHcC----CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCC--CCHHHHHH
Q 007075 2 YNLGVAYGEML----KFDMAIVFYELAFHFNPHCAEACNNLGVIYKD----RDNLDKAVECYQMALSIKP--NFSQSLNN 71 (619)
Q Consensus 2 ~~lg~~~~~~g----~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~----~g~~~~A~~~~~~al~l~p--~~~~~~~~ 71 (619)
++||.+|.. + ++++|+.+|+++.+ +.++.++++||.+|.. .+++++|+++|+++++..+ +++.++++
T Consensus 54 ~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~ 130 (212)
T 3rjv_A 54 ALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQML 130 (212)
T ss_dssp HHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHH
T ss_pred HHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHH
Confidence 678999887 7 89999999999965 5789999999999998 8999999999999999988 46899999
Q ss_pred HHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-C-----CHHHHHHHHHHHHHhCC
Q 007075 72 LGVVYTV----QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDA-G-----SISLAIDAYEQCLKIDP 131 (619)
Q Consensus 72 lg~~~~~----~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~-g-----~~~eA~~~~~~al~~~P 131 (619)
||.+|.. .+++++|+.+|+++++. +.++.++++||.+|... | ++++|+.+|+++++...
T Consensus 131 Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 131 LGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp HHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999 89999999999999999 77788999999999875 3 89999999999998843
No 196
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.22 E-value=1.9e-10 Score=119.96 Aligned_cols=160 Identities=11% Similarity=0.015 Sum_probs=129.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CCCHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHC------AEACNNLGVIYKDRDNLDKAVECYQMALSIK--------PNFSQ 67 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~la~~~~~~g~~~~A~~~~~~al~l~--------p~~~~ 67 (619)
+++|.++...|++++|+..+++++...+.. ..++.++|.++...|++++|++++++++++. |....
T Consensus 57 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 136 (373)
T 1hz4_A 57 SVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEF 136 (373)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHH
Confidence 568899999999999999999999875432 3457899999999999999999999999874 33456
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHH-H
Q 007075 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPT-----YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD--SRNAGQ-N 139 (619)
Q Consensus 68 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~-----~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~--~~~a~~-~ 139 (619)
++.++|.++...|++++|..+++++++..+. ...++.++|.++...|++++|..++++++++.+. ....+. .
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~ 216 (373)
T 1hz4_A 137 LVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISN 216 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHH
Confidence 7889999999999999999999999999875 3568899999999999999999999999987432 221111 1
Q ss_pred --HHHHHHHhhcCCcHHHHHHHHH
Q 007075 140 --RLLAMNYINEGHDDKLFEAHRD 161 (619)
Q Consensus 140 --~~la~~~~~~g~~~~a~~~~~~ 161 (619)
...+..+...|+.+++.+.+++
T Consensus 217 ~~~~~~~~~~~~g~~~~A~~~~~~ 240 (373)
T 1hz4_A 217 ANKVRVIYWQMTGDKAAAANWLRH 240 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHh
Confidence 1334457788998877765543
No 197
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.22 E-value=7.8e-12 Score=129.70 Aligned_cols=111 Identities=16% Similarity=0.186 Sum_probs=95.6
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHH
Q 007075 29 PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS-----------------QSLNNLGVVYTVQGKMDAAAEMIEK 91 (619)
Q Consensus 29 p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~-----------------~~~~~lg~~~~~~g~~~eA~~~~~~ 91 (619)
+..+..+..+|..++..|++++|+.+|++++++.|++. .+++++|.+|..+|++++|+.++++
T Consensus 176 ~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~ 255 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNI 255 (338)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 44567899999999999999999999999999999887 4899999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 007075 92 AIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139 (619)
Q Consensus 92 al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~ 139 (619)
+++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++.+
T Consensus 256 al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~ 303 (338)
T 2if4_A 256 VLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRE 303 (338)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999887766
No 198
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.21 E-value=1.6e-10 Score=124.68 Aligned_cols=150 Identities=17% Similarity=0.174 Sum_probs=127.4
Q ss_pred HHHHHHHHHcC---CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc----CCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 007075 2 YNLGVAYGEML---KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDR----DNLDKAVECYQMALSIKPNFSQSLNNLGV 74 (619)
Q Consensus 2 ~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~----g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 74 (619)
++||.+|...| ++++|+.+|+++.+..+..+..++++|.+|... +++++|+++|+++. |+++.++++||.
T Consensus 180 ~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~ 256 (452)
T 3e4b_A 180 VELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQ 256 (452)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHH
T ss_pred HHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHH
Confidence 67899999999 999999999999999999999999999999765 79999999999988 899999999999
Q ss_pred H-H--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 007075 75 V-Y--TVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG-----SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146 (619)
Q Consensus 75 ~-~--~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g-----~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~ 146 (619)
+ + ...+++++|+.+|+++.+. +++.++++||.+|. .| ++++|+.+|+++. ++++.+.++ ++..|
T Consensus 257 ~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~--Lg~~y 328 (452)
T 3e4b_A 257 LLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYY--LGQIY 328 (452)
T ss_dssp HHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHH--HHHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHH--HHHHH
Confidence 8 4 4688999999999999865 48999999999998 66 9999999999998 888888887 56666
Q ss_pred hh----cCCcHHHHHHHHHH
Q 007075 147 IN----EGHDDKLFEAHRDW 162 (619)
Q Consensus 147 ~~----~g~~~~a~~~~~~~ 162 (619)
.. ..+.++++..+++.
T Consensus 329 ~~G~g~~~d~~~A~~~~~~A 348 (452)
T 3e4b_A 329 RRGYLGKVYPQKALDHLLTA 348 (452)
T ss_dssp HTTTTSSCCHHHHHHHHHHH
T ss_pred HCCCCCCcCHHHHHHHHHHH
Confidence 54 23666666655543
No 199
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.21 E-value=4.1e-10 Score=119.56 Aligned_cols=167 Identities=14% Similarity=0.095 Sum_probs=117.7
Q ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHH
Q 007075 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQ 433 (619)
Q Consensus 354 ~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~ 433 (619)
+++.+++.++++..+.....+....+.+++.+...+++.|.+. .++.+. ++. ++|.|.|+++ +..
T Consensus 240 ~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~----~~~~l~------~~~-~~v~~~~~~~----~~~ 304 (412)
T 3otg_A 240 TARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSL----DVSGLG------EVP-ANVRLESWVP----QAA 304 (412)
T ss_dssp TTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSC----CCTTCC------CCC-TTEEEESCCC----HHH
T ss_pred CCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCC----Chhhhc------cCC-CcEEEeCCCC----HHH
Confidence 5667788888988666667777777777766544444444431 111111 243 8999999963 567
Q ss_pred hcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccC---CHHHHHHHHHHhhcCHHHH
Q 007075 434 AYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK---NEDEYVQLALQLASDVTAL 510 (619)
Q Consensus 434 ~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~---~~~~y~~~a~~L~~d~~~~ 510 (619)
+|..||+|+.. +|++|++|||++|+|+|+.+-.. -....+..+...|..-++.. |.+++.+.+.+|+.|++.+
T Consensus 305 ~l~~ad~~v~~---~g~~t~~Ea~a~G~P~v~~p~~~-~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~ 380 (412)
T 3otg_A 305 LLPHVDLVVHH---GGSGTTLGALGAGVPQLSFPWAG-DSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYR 380 (412)
T ss_dssp HGGGCSEEEES---CCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHH
T ss_pred HHhcCcEEEEC---CchHHHHHHHHhCCCEEecCCch-hHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHH
Confidence 78889999933 45689999999999999875431 12223556666777666653 8899999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCChHHHHHHHHHHHHH
Q 007075 511 ANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542 (619)
Q Consensus 511 ~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~ 542 (619)
+++++..++... . ++.+++++.+++.+.+
T Consensus 381 ~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 381 AGARAVAAEIAA-M--PGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHH-S--CCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHhc-C--CCHHHHHHHHHHHhcc
Confidence 988887766433 2 5899999999988754
No 200
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.21 E-value=4e-10 Score=115.96 Aligned_cols=139 Identities=13% Similarity=0.090 Sum_probs=128.6
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-C-CHHH
Q 007075 8 YGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRD-NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQ-G-KMDA 84 (619)
Q Consensus 8 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g-~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~-g-~~~e 84 (619)
....+..++|+.++++++.++|++..+|+..+.++..++ .++++++.+.+++..+|++..+|...+.++... + ++++
T Consensus 64 ~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~ 143 (349)
T 3q7a_A 64 AAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVS 143 (349)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHH
T ss_pred HHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHH
Confidence 334455678999999999999999999999999999999 599999999999999999999999999999988 8 9999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 007075 85 AAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS--------LAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146 (619)
Q Consensus 85 A~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~--------eA~~~~~~al~~~P~~~~a~~~~~la~~~ 146 (619)
++++++++++.+|++..+|...+.++...|+++ +++++++++++.+|.+..+|.++...+..
T Consensus 144 EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~ 213 (349)
T 3q7a_A 144 EIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVS 213 (349)
T ss_dssp HHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999888 99999999999999999999997655533
No 201
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.21 E-value=2.4e-10 Score=117.58 Aligned_cols=141 Identities=7% Similarity=-0.028 Sum_probs=132.8
Q ss_pred CHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 007075 1 MYNLGVAYGEML-KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDR-D-NLDKAVECYQMALSIKPNFSQSLNNLGVVYT 77 (619)
Q Consensus 1 ~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~-g-~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 77 (619)
|+..+.++...+ .+++++.++++++..+|++..+|+..+.++... + +++++++++.++++.+|.+..+|...+.++.
T Consensus 91 Wn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~ 170 (349)
T 3q7a_A 91 WQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYS 170 (349)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 356788888899 599999999999999999999999999999988 7 9999999999999999999999999999999
Q ss_pred HcCCHH--------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHhCCCCHHHHHHHH
Q 007075 78 VQGKMD--------AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS-------ISLAIDAYEQCLKIDPDSRNAGQNRL 141 (619)
Q Consensus 78 ~~g~~~--------eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~-------~~eA~~~~~~al~~~P~~~~a~~~~~ 141 (619)
..|+++ +++++++++++.+|.+..+|++.+.++..+++ ++++++++++++.++|++..++.++.
T Consensus 171 ~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr 249 (349)
T 3q7a_A 171 HFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLR 249 (349)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 988888 99999999999999999999999999999987 79999999999999999999998743
No 202
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.20 E-value=1.2e-09 Score=118.90 Aligned_cols=152 Identities=19% Similarity=0.211 Sum_probs=134.1
Q ss_pred HHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 007075 2 YNLGVAYGE----MLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD----RDNLDKAVECYQMALSIKPNFSQSLNNLG 73 (619)
Q Consensus 2 ~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~----~g~~~~A~~~~~~al~l~p~~~~~~~~lg 73 (619)
+.+|..|.. .+++++|+.+|+++++. +++.+++.||.+|.. .+++++|+++|+++.+. +++.++++||
T Consensus 43 ~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg 118 (490)
T 2xm6_A 43 LELGYRYFQGNETTKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLPQAQQNLG 118 (490)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHH
Confidence 678999998 89999999999999876 678999999999999 99999999999999875 5889999999
Q ss_pred HHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 007075 74 VVYTV----QGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD----AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145 (619)
Q Consensus 74 ~~~~~----~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~----~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~ 145 (619)
.+|.. .+++++|+.+|+++.+. +++.++++||.+|.. .+++++|+++|+++++. ++..+..+ ++..
T Consensus 119 ~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~~~--Lg~~ 192 (490)
T 2xm6_A 119 VMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSCNQ--LGYM 192 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHH--HHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHH--HHHH
Confidence 99999 89999999999999876 579999999999998 89999999999999986 46666666 6777
Q ss_pred Hhh----cCCcHHHHHHHHHHH
Q 007075 146 YIN----EGHDDKLFEAHRDWG 163 (619)
Q Consensus 146 ~~~----~g~~~~a~~~~~~~~ 163 (619)
|.. .++.+++.+.+++..
T Consensus 193 y~~g~g~~~~~~~A~~~~~~a~ 214 (490)
T 2xm6_A 193 YSRGLGVERNDAISAQWYRKSA 214 (490)
T ss_dssp HHHTSSSCCCHHHHHHHHHHHH
T ss_pred HhcCCCCCcCHHHHHHHHHHHH
Confidence 776 778888887776543
No 203
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.19 E-value=9.4e-11 Score=100.61 Aligned_cols=82 Identities=22% Similarity=0.249 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 16 MAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95 (619)
Q Consensus 16 ~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~ 95 (619)
+|+..|+++++.+|+++.+++++|.++...|++++|+.+|+++++++|++..+++++|.++...|++++|+..|++++++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 35556666666666666666666666666666666666666666666666666666666666666666666666666655
Q ss_pred CC
Q 007075 96 NP 97 (619)
Q Consensus 96 ~p 97 (619)
.|
T Consensus 83 ~~ 84 (115)
T 2kat_A 83 AQ 84 (115)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 204
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.19 E-value=1.1e-09 Score=119.03 Aligned_cols=152 Identities=18% Similarity=0.143 Sum_probs=89.9
Q ss_pred HHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 007075 2 YNLGVAYGE----MLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDR-----DNLDKAVECYQMALSIKPNFSQSLNNL 72 (619)
Q Consensus 2 ~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~-----g~~~~A~~~~~~al~l~p~~~~~~~~l 72 (619)
+++|.++.. .+++++|+.+|+++.+. .++.+++++|.+|... +++++|+.+|+++++. +++.+++++
T Consensus 259 ~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~l 334 (490)
T 2xm6_A 259 FRLGYILEQGLAGAKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ--GDATAQANL 334 (490)
T ss_dssp HHHHHHHHHTTTSSCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc--CCHHHHHHH
Confidence 345555555 56666666666666543 4455666666666665 5666666666666654 345566666
Q ss_pred HHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 007075 73 GVVYTVQG---KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD----AGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMN 145 (619)
Q Consensus 73 g~~~~~~g---~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~----~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~ 145 (619)
|.+|...| ++++|+.+|+++++. +++.++++||.+|.. .+++++|+.+|+++++.. ++.++.+ ++..
T Consensus 335 g~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~--Lg~~ 408 (490)
T 2xm6_A 335 GAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQ--LGEI 408 (490)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH--HHHH
T ss_pred HHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHH--HHHH
Confidence 66666544 566666666666655 456666666666666 666666666666666542 3445444 4555
Q ss_pred Hhh----cCCcHHHHHHHHHHH
Q 007075 146 YIN----EGHDDKLFEAHRDWG 163 (619)
Q Consensus 146 ~~~----~g~~~~a~~~~~~~~ 163 (619)
|.. .++.+++.+.+++..
T Consensus 409 y~~g~g~~~d~~~A~~~~~~A~ 430 (490)
T 2xm6_A 409 YYYGLGVERDYVQAWAWFDTAS 430 (490)
T ss_dssp HHHTSSSCCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHHH
Confidence 554 455565555555443
No 205
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.19 E-value=2.1e-09 Score=109.98 Aligned_cols=140 Identities=8% Similarity=0.062 Sum_probs=129.0
Q ss_pred HHHcCCHH-HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 007075 8 YGEMLKFD-MAIVFYELAFHFNPHCAEACNNLGVIYKDRDN----------LDKAVECYQMALSIKPNFSQSLNNLGVVY 76 (619)
Q Consensus 8 ~~~~g~~~-~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~----------~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 76 (619)
..+.|+++ +|+.++.+++..+|++..+|+..+.++..+++ +++++.++..++..+|.+..+|...+.++
T Consensus 39 ~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL 118 (331)
T 3dss_A 39 KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 118 (331)
T ss_dssp HHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34567766 79999999999999999999999999988776 78999999999999999999999999999
Q ss_pred HHcCC--HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 007075 77 TVQGK--MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS-ISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147 (619)
Q Consensus 77 ~~~g~--~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~-~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~ 147 (619)
...++ +++++.++.++++.+|.+..+|...+.++...|. ++++++++.++++.+|.+..+|.++...+..+
T Consensus 119 ~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 119 SRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred hccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 99994 9999999999999999999999999999999999 69999999999999999999999977665544
No 206
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.16 E-value=2.5e-11 Score=102.75 Aligned_cols=95 Identities=16% Similarity=0.236 Sum_probs=79.8
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Q 007075 31 CAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY------AEAYN 104 (619)
Q Consensus 31 ~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~a~~ 104 (619)
++.+++++|.++...|++++|++.|+++++++|+++.++.++|.++..+|++++|+..++++++++|++ ..++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 456788888888888888888888888888888888888888888888888888888888888888888 78888
Q ss_pred HHHHHHHHcCCHHHHHHHHHH
Q 007075 105 NLGVLYRDAGSISLAIDAYEQ 125 (619)
Q Consensus 105 ~Lg~~~~~~g~~~eA~~~~~~ 125 (619)
.+|.++..+|++++|+..+++
T Consensus 83 ~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 83 RLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHhHhhhHhHHHH
Confidence 888888888887777665543
No 207
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.14 E-value=4.5e-10 Score=91.24 Aligned_cols=85 Identities=41% Similarity=0.587 Sum_probs=73.6
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 007075 30 HCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109 (619)
Q Consensus 30 ~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~ 109 (619)
.+..+++.+|.++...|++++|+.+|+++++++|++..++.++|.++...|++++|+.+++++++++|++..++.++|.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 45678888888888889999999999999988888888888889888888999999999999988888888888888888
Q ss_pred HHHcC
Q 007075 110 YRDAG 114 (619)
Q Consensus 110 ~~~~g 114 (619)
+..+|
T Consensus 87 ~~~~g 91 (91)
T 1na3_A 87 KQKQG 91 (91)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 87654
No 208
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.13 E-value=1.9e-10 Score=98.69 Aligned_cols=85 Identities=24% Similarity=0.271 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 49 DKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128 (619)
Q Consensus 49 ~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~ 128 (619)
++|++.|+++++.+|+++.+++++|.++...|++++|+.+|+++++.+|++..+++++|.+|..+|++++|+..|+++++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCC
Q 007075 129 IDPDS 133 (619)
Q Consensus 129 ~~P~~ 133 (619)
+.|+.
T Consensus 82 ~~~~~ 86 (115)
T 2kat_A 82 AAQSR 86 (115)
T ss_dssp HHHHH
T ss_pred hcccc
Confidence 87753
No 209
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.12 E-value=5.3e-10 Score=100.32 Aligned_cols=134 Identities=23% Similarity=0.238 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------
Q 007075 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS------QSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY------ 99 (619)
Q Consensus 32 ~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~------~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~------ 99 (619)
..++..+|.++...|++++|+.++++++++.+... .++.++|.++...|++++|+.+++++++..+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 56789999999999999999999999999865322 478999999999999999999999999986543
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 007075 100 AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS----RNAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165 (619)
Q Consensus 100 ~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~----~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~ 165 (619)
..++.++|.++...|++++|+.++++++++.+.. ..+.....++..+...|+++++.+.+++..+.
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 158 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 158 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999874322 22334445788899999999998887776544
No 210
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.12 E-value=6e-10 Score=116.82 Aligned_cols=165 Identities=15% Similarity=0.113 Sum_probs=114.2
Q ss_pred CCCeEEEecCCC--CcCCHHHHHHHHHHHHHCCCceEEEe-ccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHH
Q 007075 355 NGFITFGSFNNL--AKITPKVLQVWARILCAVPNSRLVVK-CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431 (619)
Q Consensus 355 ~~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~a~l~l~-g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~ 431 (619)
++.+++++++|. .|..+.+++++.++.++.|+.++++. |.+ +..++.+++.+. .. ++|+|+|.++ ..+.
T Consensus 197 ~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~---~~~~~~l~~~~~---~~-~~v~~~g~~g-~~~~ 268 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLN---PVVREAVFPVLK---GV-RNFVLLDPLE-YGSM 268 (376)
T ss_dssp SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSC---HHHHHHHHHHHT---TC-TTEEEECCCC-HHHH
T ss_pred CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCC---HHHHHHHHHHhc---cC-CCEEEECCCC-HHHH
Confidence 456677888876 45778899999999888999998886 543 235666666542 23 6899998876 4588
Q ss_pred HHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccCCHHHHHHHHHHhhcCHHHHH
Q 007075 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALA 511 (619)
Q Consensus 432 ~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d~~~~~ 511 (619)
..+|+.||+|+-++ ||. ++|||++|+|||+..... +. ..++ ..|..-++..|++++++.+.+++.|++.++
T Consensus 269 ~~~~~~ad~~v~~S---~g~-~lEA~a~G~PvI~~~~~~--~~--~~~~-~~g~g~lv~~d~~~la~~i~~ll~d~~~~~ 339 (376)
T 1v4v_A 269 AALMRASLLLVTDS---GGL-QEEGAALGVPVVVLRNVT--ER--PEGL-KAGILKLAGTDPEGVYRVVKGLLENPEELS 339 (376)
T ss_dssp HHHHHTEEEEEESC---HHH-HHHHHHTTCCEEECSSSC--SC--HHHH-HHTSEEECCSCHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHhCcEEEECC---cCH-HHHHHHcCCCEEeccCCC--cc--hhhh-cCCceEECCCCHHHHHHHHHHHHhChHhhh
Confidence 99999999999776 444 889999999999753110 10 1122 234333343799999999999999998887
Q ss_pred HHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Q 007075 512 NLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543 (619)
Q Consensus 512 ~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~ 543 (619)
++++. ...|.....++++.+.+.++
T Consensus 340 ~~~~~-------~~~~~~~~~~~~i~~~i~~~ 364 (376)
T 1v4v_A 340 RMRKA-------KNPYGDGKAGLMVARGVAWR 364 (376)
T ss_dssp HHHHS-------CCSSCCSCHHHHHHHHHHHH
T ss_pred hhccc-------CCCCCCChHHHHHHHHHHHH
Confidence 77642 12234444455555555544
No 211
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.11 E-value=5.9e-09 Score=109.83 Aligned_cols=165 Identities=12% Similarity=0.108 Sum_probs=117.2
Q ss_pred CCCCeEEEecCCC--CcCC-HHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHH
Q 007075 354 TNGFITFGSFNNL--AKIT-PKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430 (619)
Q Consensus 354 ~~~~~~f~~~~~~--~K~~-~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~ 430 (619)
++..+++.++++. .|.. ..+++.+.+. .+.|+.++++.+++ ..++.+. ++. ++|+|.|+++ ..
T Consensus 216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~----~~~~~l~------~~~-~~v~~~~~~~-~~- 281 (391)
T 3tsa_A 216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPP----EHRALLT------DLP-DNARIAESVP-LN- 281 (391)
T ss_dssp CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCG----GGGGGCT------TCC-TTEEECCSCC-GG-
T ss_pred CCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECC----cchhhcc------cCC-CCEEEeccCC-HH-
Confidence 4556778888887 3444 7889998888 88999999988755 2122221 343 7899999976 33
Q ss_pred HHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccC-----CHHHHHHHHHHhhc
Q 007075 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK-----NEDEYVQLALQLAS 505 (619)
Q Consensus 431 ~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~-----~~~~y~~~a~~L~~ 505 (619)
.++..||+++. .+|++|++|||++|+|+|+++-. .-....+..+...|...++.. |.+++.+.+.+++.
T Consensus 282 --~ll~~ad~~v~---~~G~~t~~Ea~~~G~P~v~~p~~-~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 282 --LFLRTCELVIC---AGGSGTAFTATRLGIPQLVLPQY-FDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLG 355 (391)
T ss_dssp --GTGGGCSEEEE---CCCHHHHHHHHHTTCCEEECCCS-TTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHT
T ss_pred --HHHhhCCEEEe---CCCHHHHHHHHHhCCCEEecCCc-ccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHc
Confidence 45588999992 35667999999999999987541 112223556677777666654 78999999999999
Q ss_pred CHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 007075 506 DVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541 (619)
Q Consensus 506 d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~ 541 (619)
|++.++++++..++. .. ....++.++.+|+...
T Consensus 356 ~~~~~~~~~~~~~~~-~~--~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 356 DTGFAAAAIKLSDEI-TA--MPHPAALVRTLENTAA 388 (391)
T ss_dssp CTHHHHHHHHHHHHH-HT--SCCHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHH-Hc--CCCHHHHHHHHHHHHh
Confidence 999998887765553 22 2467888888876543
No 212
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.10 E-value=9e-10 Score=118.28 Aligned_cols=176 Identities=10% Similarity=0.020 Sum_probs=127.5
Q ss_pred CCeEEEecCCC--CcCCHHHHHHHHHHHHHCCC---ceEEEeccCC-CCH----HHHHHHHHHHHHc----CCCCCcEEE
Q 007075 356 GFITFGSFNNL--AKITPKVLQVWARILCAVPN---SRLVVKCKPF-CCD----SVRHRFLSTLEQL----GLESLRVDL 421 (619)
Q Consensus 356 ~~~~f~~~~~~--~K~~~~~~~~~~~il~~~P~---a~l~l~g~~~-~~~----~~~~~l~~~~~~~----Gi~~~rv~f 421 (619)
+..++.+++|+ .|..+..++++ +++++.|+ .+|+++|.+. .+. .+++.+++.+.+. |.. +|+|
T Consensus 280 ~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~--~V~f 356 (496)
T 3t5t_A 280 GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD--TVRI 356 (496)
T ss_dssp TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT--SEEE
T ss_pred CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc--CEEE
Confidence 45567778988 69999999999 99999997 4588777543 222 3344555554443 443 7999
Q ss_pred cCCccCcHHHHHhcccCcEeecCCCC-CCchhHHHhhhcC---CcEEeccCCccccchhHHHHHhcCCCccc--cCCHHH
Q 007075 422 LPLILLNHDHMQAYSLMDISLDTFPY-AGTTTTCESLYMG---VPCVTMAGSVHAHNVGVSLLTKVGLKHLI--AKNEDE 495 (619)
Q Consensus 422 ~g~~~~~~~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~G---vPvVt~~g~~~~~r~~~~~l~~~gl~~~v--~~~~~~ 495 (619)
+|.++ ..+..++|+.|||||-|+.+ +.|.+++|||+|| .|+|...-. + ++..|.. ..++ ..|.++
T Consensus 357 ~g~v~-~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a---G--a~~~l~~---~allVnP~D~~~ 427 (496)
T 3t5t_A 357 DNDND-VNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETC---G--AAEVLGE---YCRSVNPFDLVE 427 (496)
T ss_dssp EECCC-HHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB---T--THHHHGG---GSEEECTTBHHH
T ss_pred eCCCC-HHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCC---C--CHHHhCC---CEEEECCCCHHH
Confidence 99887 78999999999999999987 7799999999995 565542211 0 2233321 2333 368999
Q ss_pred HHHHHHHhhcCH-HHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHH
Q 007075 496 YVQLALQLASDV-TALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMWHR 546 (619)
Q Consensus 496 y~~~a~~L~~d~-~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~~~ 546 (619)
+++.+.++++++ +.++++.+++++++.. +|...|++.+.+.++....+
T Consensus 428 lA~AI~~aL~m~~~er~~r~~~~~~~V~~---~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 428 QAEAISAALAAGPRQRAEAAARRRDAARP---WTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTT---CBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHhhcccc
Confidence 999998888764 6677777777776543 79999999999888887543
No 213
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.09 E-value=5.2e-11 Score=100.75 Aligned_cols=91 Identities=12% Similarity=0.119 Sum_probs=85.2
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHH
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF------SQSLNNLGV 74 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~lg~ 74 (619)
++++|.++...|++++|+..|+++++.+|+++.+++++|.++..+|++++|++.|+++++++|++ ..++.++|.
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~ 86 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLEL 86 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999 889999999
Q ss_pred HHHHcCCHHHHHHHHHH
Q 007075 75 VYTVQGKMDAAAEMIEK 91 (619)
Q Consensus 75 ~~~~~g~~~eA~~~~~~ 91 (619)
++...|++++|+..+++
T Consensus 87 ~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 87 AQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHCCCCCSSSSSS
T ss_pred HHHHHHhHhhhHhHHHH
Confidence 99999988887766554
No 214
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.03 E-value=1.9e-09 Score=87.43 Aligned_cols=80 Identities=41% Similarity=0.633 Sum_probs=76.4
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
++++|.++...|++++|+.+|+++++.+|++..+++++|.++...|++++|+.+++++++++|++..++.++|.++..+|
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999988764
No 215
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.03 E-value=8.4e-10 Score=119.65 Aligned_cols=123 Identities=9% Similarity=-0.027 Sum_probs=77.7
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCH---HHH
Q 007075 6 VAYGEMLKFDMAIVFYELAFHF-----NPHC---AEACNNLGVIYKDRDNLDKAVECYQMALSI-----KPNFS---QSL 69 (619)
Q Consensus 6 ~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~la~~~~~~g~~~~A~~~~~~al~l-----~p~~~---~~~ 69 (619)
..+..+|+|++|+..|+++++. .+++ ...+.+||.+|..+|+|++|+.++++++++ -|+++ ..+
T Consensus 317 ~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l 396 (490)
T 3n71_A 317 DKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAV 396 (490)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3455667777777777777664 2333 445667777777777777777777777654 23333 356
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAIAA-----NPTY---AEAYNNLGVLYRDAGSISLAIDAYEQCLK 128 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~a~~~Lg~~~~~~g~~~eA~~~~~~al~ 128 (619)
++||.+|..+|++++|+.+|++|+++ .|++ .+...+++.++.+++.+++|...|+++.+
T Consensus 397 ~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 397 MRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777777777777777777654 3443 33456666677777777777776666643
No 216
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.03 E-value=8.7e-10 Score=115.48 Aligned_cols=127 Identities=17% Similarity=0.205 Sum_probs=87.5
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCcc---ccchhHHH
Q 007075 403 HRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH---AHNVGVSL 479 (619)
Q Consensus 403 ~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~---~~r~~~~~ 479 (619)
+.+.+...+.++. +.+.|+++ +...+|..||+++.. +|++|+.|+|++|+|+|..+-... -....+..
T Consensus 224 ~~~~~~~~~~~~~---~~v~~f~~---dm~~~l~~aDlvI~r---aG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~ 294 (365)
T 3s2u_A 224 EITAERYRTVAVE---ADVAPFIS---DMAAAYAWADLVICR---AGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEF 294 (365)
T ss_dssp HHHHHHHHHTTCC---CEEESCCS---CHHHHHHHCSEEEEC---CCHHHHHHHHHHTCCEEECC-----CCHHHHHHHH
T ss_pred ccccceecccccc---cccccchh---hhhhhhccceEEEec---CCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHH
Confidence 4556666777664 55678754 566777889999932 578999999999999886542211 12234667
Q ss_pred HHhcCCCccccC---CHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 007075 480 LTKVGLKHLIAK---NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541 (619)
Q Consensus 480 l~~~gl~~~v~~---~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~ 541 (619)
+...|...+|.. |.++..+.+.+|+.|++.+++|++++|+.. .....+++++.++++-+
T Consensus 295 l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~---~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 295 LVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLA---KPEATRTVVDACLEVAR 356 (365)
T ss_dssp HHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTC---CTTHHHHHHHHHHHHC-
T ss_pred HHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcC---CccHHHHHHHHHHHHHc
Confidence 778888766653 578899999999999999999999988642 12234555555555433
No 217
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.01 E-value=3.8e-09 Score=113.90 Aligned_cols=149 Identities=15% Similarity=0.206 Sum_probs=122.2
Q ss_pred HHHHHHHHHcCCHHHH----HHHHHHHHHhCCCcHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 007075 2 YNLGVAYGEMLKFDMA----IVFYELAFHFNPHCAEACNNLGVIYKDRD---NLDKAVECYQMALSIKPNFSQSLNNLGV 74 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A----~~~~~~al~~~p~~~~a~~~la~~~~~~g---~~~~A~~~~~~al~l~p~~~~~~~~lg~ 74 (619)
++||..|...+.++++ ..+++.+...+| .++++||.+|...| ++++|++.|+++.+..+..+..++++|.
T Consensus 145 ~~Lg~~y~~~~~~~~~~~~a~~~~~~a~~~~~---~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~ 221 (452)
T 3e4b_A 145 LAQVLLYRTQGTYDQHLDDVERICKAALNTTD---ICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVAR 221 (452)
T ss_dssp HHHHHHHHHHTCGGGGHHHHHHHHHHHTTTCT---THHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCHHHHHHHHHHHHcCCH---HHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 5788888888855444 444555544444 49999999999999 9999999999999999999999999999
Q ss_pred HHHHc----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-H--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 007075 75 VYTVQ----GKMDAAAEMIEKAIAANPTYAEAYNNLGVL-Y--RDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYI 147 (619)
Q Consensus 75 ~~~~~----g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~-~--~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~ 147 (619)
+|... +++++|+.+|+++. |+++.++++||.+ + ...+++++|+.+|+++.+. +++.+.++ ++..|.
T Consensus 222 ~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~--Lg~~y~ 294 (452)
T 3e4b_A 222 VLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELL--LGKLYY 294 (452)
T ss_dssp HHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHH--HHHHHH
T ss_pred HHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHH--HHHHHH
Confidence 99765 79999999999998 9999999999999 4 5789999999999999865 47778777 666665
Q ss_pred hcC-----CcHHHHHHHHH
Q 007075 148 NEG-----HDDKLFEAHRD 161 (619)
Q Consensus 148 ~~g-----~~~~a~~~~~~ 161 (619)
.| +.+++++.+++
T Consensus 295 -~G~g~~~d~~~A~~~~~~ 312 (452)
T 3e4b_A 295 -EGKWVPADAKAAEAHFEK 312 (452)
T ss_dssp -HCSSSCCCHHHHHHHHHT
T ss_pred -cCCCCCCCHHHHHHHHHH
Confidence 44 67777666554
No 218
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.01 E-value=5.9e-10 Score=92.59 Aligned_cols=89 Identities=13% Similarity=0.158 Sum_probs=47.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 007075 37 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQ-SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGS 115 (619)
Q Consensus 37 ~la~~~~~~g~~~~A~~~~~~al~l~p~~~~-~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~ 115 (619)
++|.++...|++++|++.|+++++.+|++.. ++.++|.++...|++++|+.+|+++++++|++..++.+ +.
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~ 76 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KM 76 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HH
Confidence 4455555555555555555555555555555 55555555555555555555555555555555555433 33
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 007075 116 ISLAIDAYEQCLKIDPDS 133 (619)
Q Consensus 116 ~~eA~~~~~~al~~~P~~ 133 (619)
+.+++..|++++..+|++
T Consensus 77 ~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 77 VMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHhccCccc
Confidence 444555555555554443
No 219
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.01 E-value=6e-09 Score=92.98 Aligned_cols=117 Identities=21% Similarity=0.255 Sum_probs=104.3
Q ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHH
Q 007075 12 LKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV----QGKMDAAAE 87 (619)
Q Consensus 12 g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~----~g~~~eA~~ 87 (619)
+++++|+.+|+++.+..... +. +|.+|...+..++|+++|+++.+. .++.++++||.+|.. .+++++|+.
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~ 82 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMF--GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQ 82 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTT--HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHh--hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 47899999999999887444 44 999999999999999999999986 789999999999999 899999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHH
Q 007075 88 MIEKAIAANPTYAEAYNNLGVLYRD----AGSISLAIDAYEQCLKIDPDSRNAGQ 138 (619)
Q Consensus 88 ~~~~al~~~p~~~~a~~~Lg~~~~~----~g~~~eA~~~~~~al~~~P~~~~a~~ 138 (619)
+|+++.+. .++.++++||.+|.. .+++++|+.+|+++.+. .+..+..
T Consensus 83 ~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~ 133 (138)
T 1klx_A 83 YYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL--GSEDACG 133 (138)
T ss_dssp HHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC--CCHHHHH
Confidence 99999987 789999999999999 99999999999999987 3444443
No 220
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.00 E-value=1e-09 Score=92.01 Aligned_cols=70 Identities=23% Similarity=0.363 Sum_probs=46.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 007075 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP 131 (619)
Q Consensus 62 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P 131 (619)
+|+++.+++++|.++...|++++|+.+|+++++++|+++.+++++|.+|..+|++++|+..|++++++.|
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 5666666666666666666666666666666666666666666666666666666666666666666544
No 221
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.99 E-value=6.9e-10 Score=92.17 Aligned_cols=90 Identities=14% Similarity=0.124 Sum_probs=65.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAE-ACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
+++|..+...|++++|+..|+++++.+|++.. +++++|.++...|++++|+++|+++++++|++..++.+ +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 56677777777777777777777777777777 77777777777777777777777777777777766543 4
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q 007075 81 KMDAAAEMIEKAIAANPTY 99 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~ 99 (619)
.+.+++..|++++..+|++
T Consensus 76 ~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHHhccCccc
Confidence 5566677777666666554
No 222
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.98 E-value=1e-08 Score=103.53 Aligned_cols=136 Identities=14% Similarity=-0.018 Sum_probs=113.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC----CHHHHHHHH--
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNP--HCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPN----FSQSLNNLG-- 73 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p--~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~----~~~~~~~lg-- 73 (619)
+.+|.++...|++++|+..+.+.+..+| ++.+++..++.++...|+.+.|.+.++++.+.+|+ +.....+++
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea 183 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAES 183 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHH
Confidence 4688999999999999999999999887 88999999999999999999999999999999983 233444444
Q ss_pred HHHHHcC--CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------CCCCHHHHHH
Q 007075 74 VVYTVQG--KMDAAAEMIEKAIAANPT--YAEAYNNLGVLYRDAGSISLAIDAYEQCLKI----------DPDSRNAGQN 139 (619)
Q Consensus 74 ~~~~~~g--~~~eA~~~~~~al~~~p~--~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~----------~P~~~~a~~~ 139 (619)
.+....| ++++|...|+++.+..|+ ....+++ ++..+|++++|.+.++++++. +|+++.+..|
T Consensus 184 ~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN 260 (310)
T 3mv2_B 184 YIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLAN 260 (310)
T ss_dssp HHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHH
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHH
Confidence 4466666 999999999999888887 3334444 899999999999999988776 4888888877
Q ss_pred H
Q 007075 140 R 140 (619)
Q Consensus 140 ~ 140 (619)
.
T Consensus 261 ~ 261 (310)
T 3mv2_B 261 Q 261 (310)
T ss_dssp H
T ss_pred H
Confidence 4
No 223
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.97 E-value=2.7e-09 Score=89.31 Aligned_cols=86 Identities=15% Similarity=0.200 Sum_probs=72.6
Q ss_pred hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHH
Q 007075 27 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT--YAEAYN 104 (619)
Q Consensus 27 ~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~--~~~a~~ 104 (619)
.+|+++.+++++|.++...|++++|+++|+++++++|++..+++++|.+|...|++++|+..|++++++.|. +.....
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~ 81 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLS 81 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999998664 334444
Q ss_pred HHHHHHHH
Q 007075 105 NLGVLYRD 112 (619)
Q Consensus 105 ~Lg~~~~~ 112 (619)
.+..++..
T Consensus 82 ~l~~~l~~ 89 (100)
T 3ma5_A 82 ELQDAKLK 89 (100)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 224
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=98.97 E-value=5.8e-09 Score=114.36 Aligned_cols=135 Identities=20% Similarity=0.127 Sum_probs=90.6
Q ss_pred HHHHHHHHcCCCCCc------EEEcCCccCcH------HHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEeccCCc
Q 007075 404 RFLSTLEQLGLESLR------VDLLPLILLNH------DHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVTMAGSV 470 (619)
Q Consensus 404 ~l~~~~~~~Gi~~~r------v~f~g~~~~~~------~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt~~g~~ 470 (619)
.+...+++.|+. ++ |+|.|...... ++..+|+.||+|+-|+.+ ++|.|.+|||+||+||||..-..
T Consensus 474 ~Il~~~r~l~L~-N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 474 LILNKIRQVQLF-NSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp HHHHHHHHHTCC-CCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred HHHHHHHhcCCC-CCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 344555667776 43 77886644333 588899999999999987 88999999999999999855321
Q ss_pred cccchhHHHHHhcC-----CCc-ccc----CCHHHHHHHHHHhh-----cCHHHHHHHHHHHHHHhhcCCCCChHHHHHH
Q 007075 471 HAHNVGVSLLTKVG-----LKH-LIA----KNEDEYVQLALQLA-----SDVTALANLRMSLRDLMSKSPVCDGQNFALG 535 (619)
Q Consensus 471 ~~~r~~~~~l~~~g-----l~~-~v~----~~~~~y~~~a~~L~-----~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~ 535 (619)
+ +..+....+ -.+ +|. .+.++.++...+.+ .|+..+..+|++.++.. ..|+|+++++.
T Consensus 553 ~----~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A---~~FSWe~iA~~ 625 (725)
T 3nb0_A 553 F----GSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALS---DLLDWKRMGLE 625 (725)
T ss_dssp H----HHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGG---GGGBHHHHHHH
T ss_pred h----hhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH---HhCCHHHHHHH
Confidence 1 011111111 123 342 34555544443333 37778888888766532 36999999999
Q ss_pred HHHHHHHHHHH
Q 007075 536 LESTYRNMWHR 546 (619)
Q Consensus 536 le~~y~~~~~~ 546 (619)
++++|+++..+
T Consensus 626 Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 626 YVKARQLALRR 636 (725)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999999864
No 225
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.91 E-value=1.6e-08 Score=103.79 Aligned_cols=133 Identities=20% Similarity=0.152 Sum_probs=107.5
Q ss_pred HHHHHHHHHcCC---HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH-------HHHH-HHHHH--HHhhCCCCHHH
Q 007075 2 YNLGVAYGEMLK---FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNL-------DKAV-ECYQM--ALSIKPNFSQS 68 (619)
Q Consensus 2 ~~lg~~~~~~g~---~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~-------~~A~-~~~~~--al~l~p~~~~~ 68 (619)
|..|..+...++ +.+|+.+|++|++++|+++.++..++.+|.....+ .+++ ..++. ++..+|.++.+
T Consensus 200 ~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~ 279 (372)
T 3ly7_A 200 FYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSII 279 (372)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHH
Confidence 445666666544 58999999999999999999999999888532111 1111 12222 23567999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 007075 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRN 135 (619)
Q Consensus 69 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~ 135 (619)
+..++..+...|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|++|+.++|..+.
T Consensus 280 ~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 280 YQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 999999999999999999999999999975 778899999999999999999999999999998753
No 226
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.89 E-value=2.4e-08 Score=105.88 Aligned_cols=165 Identities=9% Similarity=0.030 Sum_probs=133.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------CCCHHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHC------AEACNNLGVIYKDRDNLDKAVECYQMALSIK------PNFSQSL 69 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~la~~~~~~g~~~~A~~~~~~al~l~------p~~~~~~ 69 (619)
.++|.+|...|++++|++++++++...+.. ..+..+++.++...|++++|++++++++... +....++
T Consensus 59 ~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 138 (434)
T 4b4t_Q 59 LELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLS 138 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHH
Confidence 578999999999999999999999875443 2356678888889999999999999998763 3346688
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CCH--HHHH
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAIAA------NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDP---DSR--NAGQ 138 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al~~------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P---~~~--~a~~ 138 (619)
.++|.++...|+|++|+..+++++.. .+...+++.++|.+|..+|++++|..+|++++...+ +.. .+..
T Consensus 139 ~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 218 (434)
T 4b4t_Q 139 IKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAEL 218 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHH
Confidence 99999999999999999999999876 334467899999999999999999999999998743 222 2344
Q ss_pred HHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 139 NRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 139 ~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
...++..+...++++++...+.+..+.+
T Consensus 219 ~~~~g~~~~~~~~y~~A~~~~~~a~~~~ 246 (434)
T 4b4t_Q 219 DLMSGILHCEDKDYKTAFSYFFESFESY 246 (434)
T ss_dssp HHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 4456777888899998887776655443
No 227
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.88 E-value=8.7e-08 Score=100.99 Aligned_cols=169 Identities=15% Similarity=0.117 Sum_probs=117.6
Q ss_pred CCCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHH
Q 007075 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432 (619)
Q Consensus 353 l~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~ 432 (619)
.++..+++.++++..+...+.+....+.++..|--.+++.|.+.. ++.+. .+ +++|++.++++ ..
T Consensus 228 ~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~------~~-~~~v~~~~~~~-~~--- 292 (402)
T 3ia7_A 228 RPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLD----PAVLG------PL-PPNVEAHQWIP-FH--- 292 (402)
T ss_dssp STTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSC----GGGGC------SC-CTTEEEESCCC-HH---
T ss_pred CCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCC----hhhhC------CC-CCcEEEecCCC-HH---
Confidence 356678888999987777778888888888777444444554311 11111 13 47999999976 22
Q ss_pred HhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccC---CHHHHHHHHHHhhcCHHH
Q 007075 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK---NEDEYVQLALQLASDVTA 509 (619)
Q Consensus 433 ~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~---~~~~y~~~a~~L~~d~~~ 509 (619)
.++..||+++. .+|++|++|||++|+|+|.++-...-....+..+...|..-.+.. |.+++.+.+.+|+.|++.
T Consensus 293 ~ll~~ad~~v~---~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~ 369 (402)
T 3ia7_A 293 SVLAHARACLT---HGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAV 369 (402)
T ss_dssp HHHTTEEEEEE---CCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHH
T ss_pred HHHhhCCEEEE---CCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHH
Confidence 77788999983 255689999999999999875411122234667777787655543 789999999999999988
Q ss_pred HHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHH
Q 007075 510 LANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542 (619)
Q Consensus 510 ~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~ 542 (619)
++++++..++. .. ....++.++.+++.+++
T Consensus 370 ~~~~~~~~~~~-~~--~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 370 RERVRRMQRDI-LS--SGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHHHHHHHHHH-HT--SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hh--CChHHHHHHHHHHHHhh
Confidence 88877665543 22 25678888888887653
No 228
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=98.85 E-value=3.1e-07 Score=97.36 Aligned_cols=167 Identities=16% Similarity=0.148 Sum_probs=116.8
Q ss_pred CCCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEE-eccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHH
Q 007075 353 LTNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVV-KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431 (619)
Q Consensus 353 l~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l-~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~ 431 (619)
.++..+++.++++..+...+.+....+.+++.| .++++ .|.+.. .+.+. .+ +++|.+.++++ ..
T Consensus 244 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~g~~~~----~~~l~------~~-~~~v~~~~~~~-~~-- 308 (415)
T 3rsc_A 244 ADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP-WHVVMTLGGQVD----PAALG------DL-PPNVEAHRWVP-HV-- 308 (415)
T ss_dssp SSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSS-CEEEEECTTTSC----GGGGC------CC-CTTEEEESCCC-HH--
T ss_pred CCCCCEEEEECCCCCCChHHHHHHHHHHHhcCC-cEEEEEeCCCCC----hHHhc------CC-CCcEEEEecCC-HH--
Confidence 356678899999987777778888888888888 55555 454311 11111 23 37899999976 23
Q ss_pred HHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccC---CHHHHHHHHHHhhcCHH
Q 007075 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK---NEDEYVQLALQLASDVT 508 (619)
Q Consensus 432 ~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~---~~~~y~~~a~~L~~d~~ 508 (619)
.++..||+++. .+|..|++|||++|+|+|.++-. .-....+..+...|....+.. +.+++.+.+.+++.|++
T Consensus 309 -~ll~~ad~~v~---~~G~~t~~Ea~~~G~P~v~~p~~-~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~ 383 (415)
T 3rsc_A 309 -KVLEQATVCVT---HGGMGTLMEALYWGRPLVVVPQS-FDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPA 383 (415)
T ss_dssp -HHHHHEEEEEE---SCCHHHHHHHHHTTCCEEECCCS-GGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHH
T ss_pred -HHHhhCCEEEE---CCcHHHHHHHHHhCCCEEEeCCc-chHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHH
Confidence 56666999983 25567999999999999987641 112234566777787755543 78999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHH
Q 007075 509 ALANLRMSLRDLMSKSPVCDGQNFALGLESTYRN 542 (619)
Q Consensus 509 ~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~ 542 (619)
.++++++..++. ... ...++.++.+|+.+++
T Consensus 384 ~~~~~~~~~~~~-~~~--~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 384 LLARVEAMRGHV-RRA--GGAARAADAVEAYLAR 414 (415)
T ss_dssp HHHHHHHHHHHH-HHS--CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-Hhc--CHHHHHHHHHHHHhhc
Confidence 888876655543 222 4677888888877653
No 229
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.85 E-value=5.9e-08 Score=102.88 Aligned_cols=162 Identities=12% Similarity=-0.002 Sum_probs=132.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 007075 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHC-----------------AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF 65 (619)
Q Consensus 3 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----------------~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~ 65 (619)
..|..+.+.|+|++|++.|.++++..+.. ..++.++|.+|...|++++|.+++++++...+..
T Consensus 9 ~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~ 88 (434)
T 4b4t_Q 9 EEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQF 88 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTS
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 45778899999999999999999987764 2468999999999999999999999999876543
Q ss_pred H------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---
Q 007075 66 S------QSLNNLGVVYTVQGKMDAAAEMIEKAIAANP------TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKID--- 130 (619)
Q Consensus 66 ~------~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p------~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~--- 130 (619)
. .+..+++.++...|++++|+.++++++...+ ....++.++|.+|...|++++|+..+++++...
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~ 168 (434)
T 4b4t_Q 89 AKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKL 168 (434)
T ss_dssp CHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred cchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhc
Confidence 3 2456788888889999999999999988643 236789999999999999999999999998752
Q ss_pred -CCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 131 -PDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 131 -P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
.....+.....++..|...|+++++...+++...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 203 (434)
T 4b4t_Q 169 DDKPSLVDVHLLESKVYHKLRNLAKSKASLTAART 203 (434)
T ss_dssp SCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 2223344455578889999999998887766544
No 230
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.84 E-value=3.8e-08 Score=115.25 Aligned_cols=113 Identities=17% Similarity=0.099 Sum_probs=83.4
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------------
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF--------------- 65 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~--------------- 65 (619)
|+++|.++...|++++|+.+|.++ +++..|..+|.++.+.|++++|+++|++|.+..++.
T Consensus 1108 WsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~r 1182 (1630)
T 1xi4_A 1108 WSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNR 1182 (1630)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcC
Confidence 578999999999999999999886 788899999999999999999999998887655331
Q ss_pred ------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007075 66 ------------SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQC 126 (619)
Q Consensus 66 ------------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~a 126 (619)
...+.++|..+...|+|++|+.+|.++ ..|..+|.+|.++|++++|++.++++
T Consensus 1183 leele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA 1247 (1630)
T 1xi4_A 1183 LAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA 1247 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 123456677777777777777777664 24555555555555555555555555
No 231
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=98.81 E-value=1.9e-08 Score=107.40 Aligned_cols=169 Identities=15% Similarity=0.157 Sum_probs=114.1
Q ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceE-EEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHH
Q 007075 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432 (619)
Q Consensus 354 ~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l-~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~ 432 (619)
+++.++|.++++..+...+.+....+.++..|+.++ +++|.+.. .+.+ + .+. ++|.|.|+++ ..
T Consensus 230 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~----~~~l----~--~~~-~~v~~~~~~~-~~--- 294 (430)
T 2iyf_A 230 GAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVT----PAEL----G--ELP-DNVEVHDWVP-QL--- 294 (430)
T ss_dssp TCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---C----GGGG----C--SCC-TTEEEESSCC-HH---
T ss_pred CCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC----hHHh----c--cCC-CCeEEEecCC-HH---
Confidence 356678999999876566777777777776677777 45665421 1122 1 243 7899999986 22
Q ss_pred HhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccC---CHHHHHHHHHHhhcCHHH
Q 007075 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK---NEDEYVQLALQLASDVTA 509 (619)
Q Consensus 433 ~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~---~~~~y~~~a~~L~~d~~~ 509 (619)
.+|..+|+|+. .+|++|++|||++|+|+|+.+-... ....+..+...|..-++.. |.+++.+.+.+++.|++.
T Consensus 295 ~~l~~ad~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~~-q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 370 (430)
T 2iyf_A 295 AILRQADLFVT---HAGAGGSQEGLATATPMIAVPQAVD-QFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEV 370 (430)
T ss_dssp HHHTTCSEEEE---CCCHHHHHHHHHTTCCEEECCCSHH-HHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHH
T ss_pred HHhhccCEEEE---CCCccHHHHHHHhCCCEEECCCccc-hHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHH
Confidence 67888999985 3566899999999999998764210 1122445556666544432 789999999999999998
Q ss_pred HHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHH
Q 007075 510 LANLRMSLRDLMSKSPVCDGQNFALGLESTYRNMW 544 (619)
Q Consensus 510 ~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~~ 544 (619)
++++++..++.... ++.+..++.+++.+++..
T Consensus 371 ~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 371 ARRLRRIQAEMAQE---GGTRRAADLIEAELPARH 402 (430)
T ss_dssp HHHHHHHHHHHHHH---CHHHHHHHHHHTTSCC--
T ss_pred HHHHHHHHHHHHhc---CcHHHHHHHHHHHhhccc
Confidence 88877776654322 467788888887776554
No 232
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.80 E-value=3.4e-08 Score=104.43 Aligned_cols=147 Identities=13% Similarity=0.084 Sum_probs=103.3
Q ss_pred CCCCeEEEecCCC---CcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHH
Q 007075 354 TNGFITFGSFNNL---AKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430 (619)
Q Consensus 354 ~~~~~~f~~~~~~---~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~ 430 (619)
+++.+++.+.+|. .|..+.+++++.++.++.|+.++++...+ ++..++.+++. .+.. ++|+|.+.+. ..+
T Consensus 228 ~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~--~~~~~~~l~~~---~~~~-~~v~~~~~lg-~~~ 300 (396)
T 3dzc_A 228 ASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHL--NPNVREPVNKL---LKGV-SNIVLIEPQQ-YLP 300 (396)
T ss_dssp TTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCB--CHHHHHHHHHH---TTTC-TTEEEECCCC-HHH
T ss_pred CCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCC--ChHHHHHHHHH---HcCC-CCEEEeCCCC-HHH
Confidence 3455556666543 35567899999999988999998885322 13455555543 2444 6899998876 578
Q ss_pred HHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccCCHHHHHHHHHHhhcCHHHH
Q 007075 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510 (619)
Q Consensus 431 ~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d~~~~ 510 (619)
+..+|+.||+++-++ ||.+ +||+++|+|||+..... +|. . +...|..-+|..|.++.++.+.+|..|++.+
T Consensus 301 ~~~l~~~ad~vv~~S---Gg~~-~EA~a~G~PvV~~~~~~--~~~--e-~v~~G~~~lv~~d~~~l~~ai~~ll~d~~~~ 371 (396)
T 3dzc_A 301 FVYLMDRAHIILTDS---GGIQ-EEAPSLGKPVLVMRETT--ERP--E-AVAAGTVKLVGTNQQQICDALSLLLTDPQAY 371 (396)
T ss_dssp HHHHHHHCSEEEESC---SGGG-TTGGGGTCCEEECCSSC--SCH--H-HHHHTSEEECTTCHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHhcCEEEECC---ccHH-HHHHHcCCCEEEccCCC--cch--H-HHHcCceEEcCCCHHHHHHHHHHHHcCHHHH
Confidence 999999999998665 4444 99999999999864221 221 1 2233654455568999999999999999887
Q ss_pred HHHHHH
Q 007075 511 ANLRMS 516 (619)
Q Consensus 511 ~~lr~~ 516 (619)
+++++.
T Consensus 372 ~~m~~~ 377 (396)
T 3dzc_A 372 QAMSQA 377 (396)
T ss_dssp HHHHTS
T ss_pred HHHhhc
Confidence 766654
No 233
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.78 E-value=2.6e-07 Score=97.51 Aligned_cols=160 Identities=8% Similarity=0.016 Sum_probs=103.4
Q ss_pred CCCCeEEEecCCCCc--CCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHH
Q 007075 354 TNGFITFGSFNNLAK--ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431 (619)
Q Consensus 354 ~~~~~~f~~~~~~~K--~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~ 431 (619)
++..+++.++++... ....++....+.+++. +.++++++++.. ++.+. ++ +++|.|.|+++ .
T Consensus 230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~-~~~~v~~~g~~~----~~~l~------~~-~~~v~~~~~~~-~--- 293 (398)
T 3oti_A 230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGEV-DADFVLALGDLD----ISPLG------TL-PRNVRAVGWTP-L--- 293 (398)
T ss_dssp CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS-SSEEEEECTTSC----CGGGC------SC-CTTEEEESSCC-H---
T ss_pred CCCCEEEEEcCCCccccCcHHHHHHHHHHHHcC-CCEEEEEECCcC----hhhhc------cC-CCcEEEEccCC-H---
Confidence 456788999998832 1334455555556555 577777765422 11111 34 37899999974 3
Q ss_pred HHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhH--HHHHhcCCCccccC---CHHHHHHHHHHhhcC
Q 007075 432 MQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV--SLLTKVGLKHLIAK---NEDEYVQLALQLASD 506 (619)
Q Consensus 432 ~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~--~~l~~~gl~~~v~~---~~~~y~~~a~~L~~d 506 (619)
..++..||+|+. .+|++|++|||++|+|+|+++-..- ....+ ..+...|..-.+.. +.+... +++.|
T Consensus 294 ~~ll~~ad~~v~---~~G~~t~~Eal~~G~P~v~~p~~~d-q~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~ 365 (398)
T 3oti_A 294 HTLLRTCTAVVH---HGGGGTVMTAIDAGIPQLLAPDPRD-QFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGD 365 (398)
T ss_dssp HHHHTTCSEEEE---CCCHHHHHHHHHHTCCEEECCCTTC-CSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHC
T ss_pred HHHHhhCCEEEE---CCCHHHHHHHHHhCCCEEEcCCCch-hHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcC
Confidence 445566999992 3667899999999999998753111 11234 56666777655543 333333 88899
Q ss_pred HHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHH
Q 007075 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540 (619)
Q Consensus 507 ~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y 540 (619)
++.++++++..++.. . ...+++.+..+|+..
T Consensus 366 ~~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 366 ESLRTAAREVREEMV-A--LPTPAETVRRIVERI 396 (398)
T ss_dssp HHHHHHHHHHHHHHH-T--SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-h--CCCHHHHHHHHHHHh
Confidence 999998877766532 2 257888888888764
No 234
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.76 E-value=4e-08 Score=104.17 Aligned_cols=146 Identities=16% Similarity=0.200 Sum_probs=104.0
Q ss_pred CCCCeEEEecCCC---CcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHH
Q 007075 354 TNGFITFGSFNNL---AKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430 (619)
Q Consensus 354 ~~~~~~f~~~~~~---~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~ 430 (619)
+++.+++.+++|. .|..+.+++++.++.++.|+.++++.+.+ .+..++.+++. .+.. ++|+|++.+. +.+
T Consensus 222 ~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~--~~~~~~~l~~~---~~~~-~~v~l~~~l~-~~~ 294 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHL--NPAVREKAMAI---LGGH-ERIHLIEPLD-AID 294 (403)
T ss_dssp TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCS--CHHHHHHHHHH---HTTC-TTEEEECCCC-HHH
T ss_pred cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCC--CHHHHHHHHHH---hCCC-CCEEEeCCCC-HHH
Confidence 4556677788874 35457899999999999999988886432 22344444443 3444 6899999976 579
Q ss_pred HHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccCCHHHHHHHHHHhhcCHHHH
Q 007075 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510 (619)
Q Consensus 431 ~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d~~~~ 510 (619)
+..+|+.||+++-.+ ||.+ +||+++|+|||+.+.. .+|.- .+ ..|-.-+|..|.++.++.+.+++.|++.+
T Consensus 295 ~~~l~~~ad~vv~~S---Gg~~-~EA~a~g~PvV~~~~~--~~~~e--~v-~~g~~~lv~~d~~~l~~ai~~ll~~~~~~ 365 (403)
T 3ot5_A 295 FHNFLRKSYLVFTDS---GGVQ-EEAPGMGVPVLVLRDT--TERPE--GI-EAGTLKLIGTNKENLIKEALDLLDNKESH 365 (403)
T ss_dssp HHHHHHHEEEEEECC---HHHH-HHGGGTTCCEEECCSS--CSCHH--HH-HHTSEEECCSCHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHhcCEEEECC---ccHH-HHHHHhCCCEEEecCC--Ccchh--he-eCCcEEEcCCCHHHHHHHHHHHHcCHHHH
Confidence 999999999998554 4444 9999999999987421 12211 12 34644445569999999999999999888
Q ss_pred HHHHH
Q 007075 511 ANLRM 515 (619)
Q Consensus 511 ~~lr~ 515 (619)
+++++
T Consensus 366 ~~m~~ 370 (403)
T 3ot5_A 366 DKMAQ 370 (403)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77654
No 235
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.76 E-value=6.9e-08 Score=104.58 Aligned_cols=129 Identities=9% Similarity=-0.006 Sum_probs=102.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---H
Q 007075 37 NLGVIYKDRDNLDKAVECYQMALSI-----KPNFS---QSLNNLGVVYTVQGKMDAAAEMIEKAIAA-----NPTY---A 100 (619)
Q Consensus 37 ~la~~~~~~g~~~~A~~~~~~al~l-----~p~~~---~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~p~~---~ 100 (619)
..+..+..+|+|++|+..|++++++ .|+++ .++.+||.+|..+|+|++|+.++++++++ .|++ .
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 3445577899999999999999986 34554 57899999999999999999999999987 3444 4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHH-HHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 007075 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKI-----DPDSRNAGQ-NRLLAMNYINEGHDDKLFEAHRDWGKR 165 (619)
Q Consensus 101 ~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-----~P~~~~a~~-~~~la~~~~~~g~~~~a~~~~~~~~~~ 165 (619)
..+++||.+|..+|++++|+.+|++|+++ .|+++.... ..+++..+...+.++++...++...++
T Consensus 394 ~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999975 677765432 234666777777777776666655443
No 236
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.73 E-value=2e-07 Score=85.97 Aligned_cols=137 Identities=15% Similarity=0.173 Sum_probs=93.0
Q ss_pred CCCeEEEecCCCC-cCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHH
Q 007075 355 NGFITFGSFNNLA-KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQ 433 (619)
Q Consensus 355 ~~~~~f~~~~~~~-K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~ 433 (619)
+..++|.++|+.. ......+....+.+.+.+ .++++++++... .++. ++|+|.|+++ ..+.+.
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~-~~~~~~~g~~~~-------------~~~~-~~v~~~~~~~-~~~~l~ 83 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQIP-QKVLWRFDGNKP-------------DTLG-LNTRLYKWIP-QNDLLG 83 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSS-SEEEEECCSSCC-------------TTCC-TTEEEESSCC-HHHHHT
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhCC-CeEEEEECCcCc-------------ccCC-CcEEEecCCC-HHHHhc
Confidence 3457788888874 445566666666676666 455555433111 1343 7899999987 455553
Q ss_pred hcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccC---CHHHHHHHHHHhhcCHHHH
Q 007075 434 AYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK---NEDEYVQLALQLASDVTAL 510 (619)
Q Consensus 434 ~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~---~~~~y~~~a~~L~~d~~~~ 510 (619)
+..||+++. .+|++|++|||++|+|+|..+-... ....+..+...|..-++.. +.+++.+...++..|++.+
T Consensus 84 -~~~ad~~I~---~~G~~t~~Ea~~~G~P~i~~p~~~~-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~ 158 (170)
T 2o6l_A 84 -HPKTRAFIT---HGGANGIYEAIYHGIPMVGIPLFAD-QPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPSYK 158 (170)
T ss_dssp -STTEEEEEE---CCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHH
T ss_pred -CCCcCEEEE---cCCccHHHHHHHcCCCEEeccchhh-HHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHHHH
Confidence 388999994 3788999999999999998764211 1223556666676544432 7889999999999998644
Q ss_pred HH
Q 007075 511 AN 512 (619)
Q Consensus 511 ~~ 512 (619)
++
T Consensus 159 ~~ 160 (170)
T 2o6l_A 159 EN 160 (170)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 237
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.70 E-value=5.7e-08 Score=102.41 Aligned_cols=142 Identities=15% Similarity=0.139 Sum_probs=101.1
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
|.++|..+...|+|++|..+|.++ ..|..+|.++..+|++++|+++|+++ +++..|...+.++...|
T Consensus 125 ~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ 191 (449)
T 1b89_A 125 IQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGK 191 (449)
T ss_dssp ------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcC
Confidence 467888899999999999999876 46788999999999999999999988 46788888889999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHR 160 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~ 160 (619)
+++.|..+..+ +..+| +-...+..+|.+.|++++|+.++++++.+++.+...+..+ +..|.+- +.++..+..+
T Consensus 192 ef~lA~~~~l~-L~~~a---d~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel--~il~~ky-~p~k~~ehl~ 264 (449)
T 1b89_A 192 EFRLAQMCGLH-IVVHA---DELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL--AILYSKF-KPQKMREHLE 264 (449)
T ss_dssp CHHHHHHTTTT-TTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHH--HHHHHTT-CHHHHHHHHH
T ss_pred cHHHHHHHHHH-HHhCH---hhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHH--HHHHHhc-CHHHHHHHHH
Confidence 99999877765 33444 4455688899999999999999999999999998888774 4444322 3344444444
Q ss_pred HH
Q 007075 161 DW 162 (619)
Q Consensus 161 ~~ 162 (619)
.+
T Consensus 265 ~~ 266 (449)
T 1b89_A 265 LF 266 (449)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 238
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.66 E-value=8.9e-08 Score=101.11 Aligned_cols=162 Identities=15% Similarity=0.080 Sum_probs=100.7
Q ss_pred CCCCeEEEecCCCC--cC------CHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCc
Q 007075 354 TNGFITFGSFNNLA--KI------TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI 425 (619)
Q Consensus 354 ~~~~~~f~~~~~~~--K~------~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~ 425 (619)
++..+++.++++.. |. ....++...+.+.+. +.++++++++ ..++.+. .+ +++|+|.|++
T Consensus 225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~v~~~~~----~~~~~l~------~~-~~~v~~~~~~ 292 (398)
T 4fzr_A 225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-GFEVVVAVSD----KLAQTLQ------PL-PEGVLAAGQF 292 (398)
T ss_dssp CSSCEEECC----------------CCSHHHHHHHGGGG-TCEEEECCCC------------------C-CTTEEEESCC
T ss_pred CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-CCEEEEEeCC----cchhhhc------cC-CCcEEEeCcC
Confidence 35567788888874 32 234455555555555 5677776654 2223332 23 4899999997
Q ss_pred cCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccC---CHHHHHHHHHH
Q 007075 426 LLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK---NEDEYVQLALQ 502 (619)
Q Consensus 426 ~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~---~~~~y~~~a~~ 502 (619)
+ +..++..||+|+ ..+|++|++|||++|+|+|+++-.. -....+..+...|..-++.. |.+++.+.+.+
T Consensus 293 ~----~~~ll~~ad~~v---~~gG~~t~~Ea~~~G~P~v~~p~~~-~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ 364 (398)
T 4fzr_A 293 P----LSAIMPACDVVV---HHGGHGTTLTCLSEGVPQVSVPVIA-EVWDSARLLHAAGAGVEVPWEQAGVESVLAACAR 364 (398)
T ss_dssp C----HHHHGGGCSEEE---ECCCHHHHHHHHHTTCCEEECCCSG-GGHHHHHHHHHTTSEEECC-------CHHHHHHH
T ss_pred C----HHHHHhhCCEEE---ecCCHHHHHHHHHhCCCEEecCCch-hHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHH
Confidence 4 455666799999 2466789999999999999976421 12223556667777665543 67889999999
Q ss_pred hhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 007075 503 LASDVTALANLRMSLRDLMSKSPVCDGQNFALGLES 538 (619)
Q Consensus 503 L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~ 538 (619)
++.|++.++++++..++.. ....++++++.+|+
T Consensus 365 ll~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 365 IRDDSSYVGNARRLAAEMA---TLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHCTHHHHHHHHHHHHHT---TSCCHHHHHHHHTC
T ss_pred HHhCHHHHHHHHHHHHHHH---cCCCHHHHHHHHhc
Confidence 9999999998877766532 23578888887764
No 239
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.65 E-value=5.1e-07 Score=105.86 Aligned_cols=143 Identities=12% Similarity=0.066 Sum_probs=97.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh----------------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 007075 4 LGVAYGEMLKFDMAIVFYELAFHF----------------------NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61 (619)
Q Consensus 4 lg~~~~~~g~~~~A~~~~~~al~~----------------------~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l 61 (619)
+|.++...|.+++|..+|+++-.. ..+.+.+|+++|.++...|++++|+++|.++
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 466677777777777766654211 1345677888888888888888888888765
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------------------------CHHHHHHHHHHHHHcC
Q 007075 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPT---------------------------YAEAYNNLGVLYRDAG 114 (619)
Q Consensus 62 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~---------------------------~~~a~~~Lg~~~~~~g 114 (619)
+++..+.++|.++.+.|++++|+++|+.+.+..++ +...+.++|..+...|
T Consensus 1132 --dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg 1209 (1630)
T 1xi4_A 1132 --DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEK 1209 (1630)
T ss_pred --CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcC
Confidence 77788888888888888888888888777765532 1224556677777777
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 007075 115 SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161 (619)
Q Consensus 115 ~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~ 161 (619)
++++|+.+|.++ ..+.. ++..+...|++++|.+.+++
T Consensus 1210 ~YeeA~~~Y~kA--------~ny~r--LA~tLvkLge~q~AIEaarK 1246 (1630)
T 1xi4_A 1210 MYDAAKLLYNNV--------SNFGR--LASTLVHLGEYQAAVDGARK 1246 (1630)
T ss_pred CHHHHHHHHHhh--------hHHHH--HHHHHHHhCCHHHHHHHHHH
Confidence 777777777765 12222 55666666777777666543
No 240
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.64 E-value=3.3e-07 Score=92.49 Aligned_cols=147 Identities=14% Similarity=0.019 Sum_probs=118.0
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 17 AIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKP--NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIA 94 (619)
Q Consensus 17 A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p--~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~ 94 (619)
|+..+++.+...+....++..+|.++...|++++|++.+.+.+..+| ++.+++..++.++..+|+.+.|.+.+++..+
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~ 164 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTN 164 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 67777777776666677788999999999999999999999999987 8899999999999999999999999999999
Q ss_pred hCCC----CHHHHHHH--HHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 95 ANPT----YAEAYNNL--GVLYRDAG--SISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 95 ~~p~----~~~a~~~L--g~~~~~~g--~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
.+|+ +-....+| +.+....| ++.+|...|+++.+..|+... ...++. +++..|++++|.+.++.+.+..
T Consensus 165 ~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~--~~lLln-~~~~~g~~~eAe~~L~~l~~~~ 241 (310)
T 3mv2_B 165 AIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKT--QLGLLN-LHLQQRNIAEAQGIVELLLSDY 241 (310)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHH--HHHHHH-HHHHHTCHHHHHHHHHHHHSHH
T ss_pred cCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCccc--HHHHHH-HHHHcCCHHHHHHHHHHHHHhc
Confidence 9993 23344444 44466666 999999999999888776211 112233 7889999999988887665543
No 241
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.60 E-value=4.3e-07 Score=80.74 Aligned_cols=99 Identities=20% Similarity=0.250 Sum_probs=87.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-
Q 007075 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKD----RDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTV- 78 (619)
Q Consensus 4 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~----~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~- 78 (619)
+|.+|...+..++|+.+|+++.+. .++.++++||.+|.. .+++++|+++|+++.+. .++.++++||.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G 106 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAG 106 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCC
Confidence 678888888899999999999886 689999999999999 89999999999999986 789999999999999
Q ss_pred ---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 007075 79 ---QGKMDAAAEMIEKAIAANPTYAEAYNNLGV 108 (619)
Q Consensus 79 ---~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~ 108 (619)
.+++++|+.+|+++.+. .++.+..+|+.
T Consensus 107 ~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l~~ 137 (138)
T 1klx_A 107 KGVVKNEKQAVKTFEKACRL--GSEDACGILNN 137 (138)
T ss_dssp SSSCCCHHHHHHHHHHHHHT--TCHHHHHHC--
T ss_pred CCCCcCHHHHHHHHHHHHHC--CCHHHHHHHhh
Confidence 99999999999999988 45666666553
No 242
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.57 E-value=5.2e-07 Score=80.69 Aligned_cols=93 Identities=11% Similarity=0.036 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCCHHHHHH
Q 007075 47 NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG---KMDAAAEMIEKAIAAN-P-TYAEAYNNLGVLYRDAGSISLAID 121 (619)
Q Consensus 47 ~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g---~~~eA~~~~~~al~~~-p-~~~~a~~~Lg~~~~~~g~~~eA~~ 121 (619)
....+.+.|++.++.++.+.++.+++|.++.+.+ +.++++..+++.++.+ | +..+++++||..++++|+|++|++
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 3567788888888888999999999999999988 6779999999999998 7 568999999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHH
Q 007075 122 AYEQCLKIDPDSRNAGQN 139 (619)
Q Consensus 122 ~~~~al~~~P~~~~a~~~ 139 (619)
+++++++++|++..+..-
T Consensus 93 y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 93 YVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp HHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHH
Confidence 999999999999876543
No 243
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.56 E-value=3.3e-07 Score=75.53 Aligned_cols=72 Identities=15% Similarity=0.080 Sum_probs=55.6
Q ss_pred CCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 007075 62 KPNFSQSLNNLGVVYTVQGK---MDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133 (619)
Q Consensus 62 ~p~~~~~~~~lg~~~~~~g~---~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~ 133 (619)
+|++++.+..+|.+++..++ .++|...++++++++|+++.+++.+|..++..|+|++|+.+|+++++.+|..
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 56777777777777766555 6788888888888888888888888888888888888888888888777763
No 244
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.56 E-value=8.8e-07 Score=92.85 Aligned_cols=163 Identities=13% Similarity=0.067 Sum_probs=104.4
Q ss_pred CCCeEEEecCCCCcC-----CHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcH
Q 007075 355 NGFITFGSFNNLAKI-----TPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNH 429 (619)
Q Consensus 355 ~~~~~f~~~~~~~K~-----~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~ 429 (619)
+..+++.++++..+. ..+.+....+.+.+. +.++++++++ +..+.+. . + +++|.+ |+++ .
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~g~----~~~~~l~----~--~-~~~v~~-~~~~-~- 273 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-DVELIVAAPD----TVAEALR----A--E-VPQARV-GWTP-L- 273 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-TCEEEEECCH----HHHHHHH----H--H-CTTSEE-ECCC-H-
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC-CcEEEEEeCC----CCHHhhC----C--C-CCceEE-cCCC-H-
Confidence 446788899987542 234444444445444 5677665432 2233332 2 3 378999 9975 3
Q ss_pred HHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccC---CHHHHHHHHHHhhcC
Q 007075 430 DHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK---NEDEYVQLALQLASD 506 (619)
Q Consensus 430 ~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~---~~~~y~~~a~~L~~d 506 (619)
..++..||+|+.. +|++|++|||++|+|+|+.+-..- ....+..+...|..-.+.. +.++..+.+.+++.|
T Consensus 274 --~~~l~~~d~~v~~---~G~~t~~Ea~~~G~P~v~~p~~~d-q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 347 (384)
T 2p6p_A 274 --DVVAPTCDLLVHH---AGGVSTLTGLSAGVPQLLIPKGSV-LEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAK 347 (384)
T ss_dssp --HHHGGGCSEEEEC---SCTTHHHHHHHTTCCEEECCCSHH-HHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHC
T ss_pred --HHHHhhCCEEEeC---CcHHHHHHHHHhCCCEEEccCccc-chHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcC
Confidence 3456889999953 566799999999999998864210 1123445566676544442 788999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 007075 507 VTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541 (619)
Q Consensus 507 ~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~ 541 (619)
++.++++++..+.. ...+ ..++.+..++....
T Consensus 348 ~~~~~~~~~~~~~~-~~~~--~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 348 DTYARRAQDLSREI-SGMP--LPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHHHHHH-HTSC--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCC--CHHHHHHHHHHHhh
Confidence 99888777665543 3232 56677776666543
No 245
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.50 E-value=2.8e-07 Score=98.29 Aligned_cols=95 Identities=12% Similarity=0.048 Sum_probs=67.5
Q ss_pred HHHcCCHHHHHHHHHHHHhh-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHH
Q 007075 42 YKDRDNLDKAVECYQMALSI-----KPNFS---QSLNNLGVVYTVQGKMDAAAEMIEKAIAA-----NPTY---AEAYNN 105 (619)
Q Consensus 42 ~~~~g~~~~A~~~~~~al~l-----~p~~~---~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~a~~~ 105 (619)
+..+|++++|++.+++++++ .|+++ .++.++|.+|..+|+|++|+.++++++++ .|++ ...+++
T Consensus 297 ~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~n 376 (429)
T 3qwp_A 297 LKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMK 376 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHH
Confidence 44567888888888888764 34443 46777888888888888888888888765 2333 346778
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Q 007075 106 LGVLYRDAGSISLAIDAYEQCLKI-----DPDSRNA 136 (619)
Q Consensus 106 Lg~~~~~~g~~~eA~~~~~~al~~-----~P~~~~a 136 (619)
||.+|..+|++++|+.+|++|+++ .|+++..
T Consensus 377 La~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 412 (429)
T 3qwp_A 377 VGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLI 412 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHH
Confidence 888888888888888888888764 5666543
No 246
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.50 E-value=5.2e-07 Score=74.34 Aligned_cols=73 Identities=12% Similarity=0.040 Sum_probs=68.0
Q ss_pred CCCcHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 007075 28 NPHCAEACNNLGVIYKDRDN---LDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100 (619)
Q Consensus 28 ~p~~~~a~~~la~~~~~~g~---~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~ 100 (619)
+|++++.+..+|.+++..++ .++|...++++++++|+++.++..+|..++..|+|++|+.+++++++.+|..+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 68899999999999987666 79999999999999999999999999999999999999999999999999843
No 247
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.49 E-value=1e-06 Score=78.78 Aligned_cols=96 Identities=7% Similarity=-0.039 Sum_probs=86.0
Q ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHHHH
Q 007075 13 KFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRD---NLDKAVECYQMALSIK-P-NFSQSLNNLGVVYTVQGKMDAAAE 87 (619)
Q Consensus 13 ~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g---~~~~A~~~~~~al~l~-p-~~~~~~~~lg~~~~~~g~~~eA~~ 87 (619)
....+.+.|.+.++.++.+.++.+++|.++...+ +.++++.+++..++.+ | ++.+++++||..++++|+|++|..
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 3567788888888888999999999999999988 6779999999999998 7 678999999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHH
Q 007075 88 MIEKAIAANPTYAEAYNNLGV 108 (619)
Q Consensus 88 ~~~~al~~~p~~~~a~~~Lg~ 108 (619)
+++++++.+|++..+....-.
T Consensus 93 y~~~lL~ieP~n~QA~~Lk~~ 113 (152)
T 1pc2_A 93 YVRGLLQTEPQNNQAKELERL 113 (152)
T ss_dssp HHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHH
Confidence 999999999999887665443
No 248
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.47 E-value=6.6e-07 Score=95.30 Aligned_cols=93 Identities=14% Similarity=0.096 Sum_probs=74.6
Q ss_pred HcCCHHHHHHHHHHHHhh-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHH
Q 007075 44 DRDNLDKAVECYQMALSI-----KPNFS---QSLNNLGVVYTVQGKMDAAAEMIEKAIAA-----NPTY---AEAYNNLG 107 (619)
Q Consensus 44 ~~g~~~~A~~~~~~al~l-----~p~~~---~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~p~~---~~a~~~Lg 107 (619)
..|+|++|+..|++++++ .|+++ .++.+||.+|..+|+|++|+.++++++++ .|++ ...+++||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 357889999999999875 45554 46788999999999999999999999876 3444 45688999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Q 007075 108 VLYRDAGSISLAIDAYEQCLKI-----DPDSRNA 136 (619)
Q Consensus 108 ~~~~~~g~~~eA~~~~~~al~~-----~P~~~~a 136 (619)
.+|..+|++++|+.+|++|+++ .|+++..
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 9999999999999999999875 5777654
No 249
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.45 E-value=3.4e-06 Score=88.65 Aligned_cols=163 Identities=15% Similarity=0.051 Sum_probs=103.7
Q ss_pred CCCCCeEEEecCCCC--cCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHH
Q 007075 353 LTNGFITFGSFNNLA--KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHD 430 (619)
Q Consensus 353 l~~~~~~f~~~~~~~--K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~ 430 (619)
.++..++|.+|++.. +.....+..+.+.+.+.+.-.+|..+..... ..+--+++|.+.+++| ..
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~------------~~~~~~~~v~~~~~~p-~~- 299 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA------------LLGELPANVRVVEWIP-LG- 299 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC------------CCCCCCTTEEEECCCC-HH-
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc------------ccccCCCCEEEEeecC-HH-
Confidence 356678898999873 3334566666777777766666655433111 1122248999999986 34
Q ss_pred HHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccCCHHHHHHHHHHhhcCHHHH
Q 007075 431 HMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTAL 510 (619)
Q Consensus 431 ~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d~~~~ 510 (619)
.++..+|+|+ ..+|.+|++|||++|||+|+++-.. -....+..+...|..-.+ ++.+.-.+...+++.|++.+
T Consensus 300 --~lL~~~~~~v---~h~G~~s~~Eal~~GvP~v~~P~~~-dQ~~na~~v~~~G~g~~l-~~~~~~~~al~~lL~d~~~r 372 (400)
T 4amg_A 300 --ALLETCDAII---HHGGSGTLLTALAAGVPQCVIPHGS-YQDTNRDVLTGLGIGFDA-EAGSLGAEQCRRLLDDAGLR 372 (400)
T ss_dssp --HHHTTCSEEE---ECCCHHHHHHHHHHTCCEEECCC----CHHHHHHHHHHTSEEEC-CTTTCSHHHHHHHHHCHHHH
T ss_pred --HHhhhhhhee---ccCCccHHHHHHHhCCCEEEecCcc-cHHHHHHHHHHCCCEEEc-CCCCchHHHHHHHHcCHHHH
Confidence 4556799988 2477889999999999999876421 112234556666775333 33333456677889999887
Q ss_pred HHHHHHHHHHhhcCCCCChHHHHHHHHHH
Q 007075 511 ANLRMSLRDLMSKSPVCDGQNFALGLEST 539 (619)
Q Consensus 511 ~~lr~~~r~~~~~~~~~~~~~~~~~le~~ 539 (619)
++.++ +++++...+ .....++.+|++
T Consensus 373 ~~a~~-l~~~~~~~~--~~~~~a~~le~l 398 (400)
T 4amg_A 373 EAALR-VRQEMSEMP--PPAETAAXLVAL 398 (400)
T ss_dssp HHHHH-HHHHHHTSC--CHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHcCC--CHHHHHHHHHHh
Confidence 76544 444454443 577888888764
No 250
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.45 E-value=3.4e-07 Score=97.53 Aligned_cols=94 Identities=13% Similarity=-0.017 Sum_probs=77.2
Q ss_pred HcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCH---HHHHHHH
Q 007075 10 EMLKFDMAIVFYELAFHF-----NPHC---AEACNNLGVIYKDRDNLDKAVECYQMALSI-----KPNFS---QSLNNLG 73 (619)
Q Consensus 10 ~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~la~~~~~~g~~~~A~~~~~~al~l-----~p~~~---~~~~~lg 73 (619)
..|+|++|+..|++++++ .|++ ...+.+||.+|..+|+|++|+.++++++++ -|+++ ..+++||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 457899999999999985 4444 457889999999999999999999999975 34444 4789999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHH
Q 007075 74 VVYTVQGKMDAAAEMIEKAIAA-----NPTYAEAY 103 (619)
Q Consensus 74 ~~~~~~g~~~eA~~~~~~al~~-----~p~~~~a~ 103 (619)
.+|..+|++++|+.+|++|+++ .|+++...
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 9999999999999999999988 46666543
No 251
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=98.44 E-value=4.5e-06 Score=88.72 Aligned_cols=165 Identities=12% Similarity=0.085 Sum_probs=109.0
Q ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceE-EEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHH
Q 007075 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRL-VVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHM 432 (619)
Q Consensus 354 ~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l-~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~ 432 (619)
+++.+++.++|+..+...+.+....+.++. ++.++ +.+|.+... +.+ ..+ +++|.+.++++ ..
T Consensus 253 ~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~-~~~~~~~~~g~~~~~----~~~------~~~-~~~v~~~~~~~-~~--- 316 (424)
T 2iya_A 253 DGRPVLLIALGSAFTDHLDFYRTCLSAVDG-LDWHVVLSVGRFVDP----ADL------GEV-PPNVEVHQWVP-QL--- 316 (424)
T ss_dssp SSCCEEEEECCSSSCCCHHHHHHHHHHHTT-CSSEEEEECCTTSCG----GGG------CSC-CTTEEEESSCC-HH---
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHHHhc-CCcEEEEEECCcCCh----HHh------ccC-CCCeEEecCCC-HH---
Confidence 345688889998875556666666666655 45566 445644211 111 123 47899999986 22
Q ss_pred HhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCcccc---CCHHHHHHHHHHhhcCHHH
Q 007075 433 QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA---KNEDEYVQLALQLASDVTA 509 (619)
Q Consensus 433 ~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~---~~~~~y~~~a~~L~~d~~~ 509 (619)
.++..+|+|+. .+|.+|++|||++|+|+|+.+-..- ....+..+...|..-.+. -+.++..+.+.++..|++.
T Consensus 317 ~~l~~~d~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 392 (424)
T 2iya_A 317 DILTKASAFIT---HAGMGSTMEALSNAVPMVAVPQIAE-QTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGV 392 (424)
T ss_dssp HHHTTCSEEEE---CCCHHHHHHHHHTTCCEEECCCSHH-HHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred HHHhhCCEEEE---CCchhHHHHHHHcCCCEEEecCccc-hHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHH
Confidence 57788999984 3667899999999999998875311 122345566667654443 2789999999999999988
Q ss_pred HHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 007075 510 LANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541 (619)
Q Consensus 510 ~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~ 541 (619)
++++++..+.. .. ....++.++.+|+..+
T Consensus 393 ~~~~~~~~~~~-~~--~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 393 AERLAAVRQEI-RE--AGGARAAADILEGILA 421 (424)
T ss_dssp HHHHHHHHHHH-HT--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-Hh--cCcHHHHHHHHHHHHh
Confidence 77766554442 22 2346667777776543
No 252
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.41 E-value=7.6e-07 Score=93.86 Aligned_cols=147 Identities=14% Similarity=0.173 Sum_probs=121.1
Q ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 1 MYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 1 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
|..+|.++.++|+|++|++.|+++ +++.+|.....++...|+++.|..+... +..+|++ ...+...|.+.|
T Consensus 151 ~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G 221 (449)
T 1b89_A 151 FGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQDRG 221 (449)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHHHCC
Confidence 357899999999999999999999 4789999999999999999999888775 3345544 456888999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHHHhhcCCcH
Q 007075 81 KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD--AGSISLAIDAYEQCLKIDP-----DSRNAGQNRLLAMNYINEGHDD 153 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~--~g~~~eA~~~~~~al~~~P-----~~~~a~~~~~la~~~~~~g~~~ 153 (619)
++++|+.++++++.+++.+...+..||.+|.+ .++..+.++.|...+.+.| .+...|.. +...|...++++
T Consensus 222 ~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e--~~~ly~~~~e~d 299 (449)
T 1b89_A 222 YFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAE--LVFLYDKYEEYD 299 (449)
T ss_dssp CHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHH--HHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH--HHHHHHhhchHH
Confidence 99999999999999999999999999998865 4577788888877777766 55555554 666777778887
Q ss_pred HHHHH
Q 007075 154 KLFEA 158 (619)
Q Consensus 154 ~a~~~ 158 (619)
.|...
T Consensus 300 ~A~~t 304 (449)
T 1b89_A 300 NAIIT 304 (449)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76553
No 253
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.40 E-value=1.2e-06 Score=86.57 Aligned_cols=107 Identities=18% Similarity=0.103 Sum_probs=92.6
Q ss_pred hCCCcHHHHHHHHHHHHH---c--C------CHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHc-----CCHHHHHHH
Q 007075 27 FNPHCAEACNNLGVIYKD---R--D------NLDKAVECYQMALSIKPN--FSQSLNNLGVVYTVQ-----GKMDAAAEM 88 (619)
Q Consensus 27 ~~p~~~~a~~~la~~~~~---~--g------~~~~A~~~~~~al~l~p~--~~~~~~~lg~~~~~~-----g~~~eA~~~ 88 (619)
.+|+++++++..|.+... . + ...+|...++++++++|+ +..+|..+|.+|... |+.++|..+
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 356678888888877643 1 2 367899999999999999 566999999999995 999999999
Q ss_pred HHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCC
Q 007075 89 IEKAIAANPTY-AEAYNNLGVLYRD-AGSISLAIDAYEQCLKIDPDS 133 (619)
Q Consensus 89 ~~~al~~~p~~-~~a~~~Lg~~~~~-~g~~~eA~~~~~~al~~~P~~ 133 (619)
|++|++++|+. ..+++.+|..+.. .|++++|.++++++++.+|..
T Consensus 227 ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 99999999975 9999999999988 499999999999999988773
No 254
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.40 E-value=2.8e-06 Score=71.38 Aligned_cols=75 Identities=23% Similarity=0.243 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 007075 33 EACNNLGVIYKDRDNLDKAVECYQMALSIK-------PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNN 105 (619)
Q Consensus 33 ~a~~~la~~~~~~g~~~~A~~~~~~al~l~-------p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~ 105 (619)
.-++.+|..++..++|+.|+..|++|++.. +.....+.+||.+++++|++++|+.+++++++++|++..+..+
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n 85 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGN 85 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhh
Confidence 344555555555555555555555555431 1233444444555555555555555555555555554444444
Q ss_pred HH
Q 007075 106 LG 107 (619)
Q Consensus 106 Lg 107 (619)
++
T Consensus 86 ~~ 87 (104)
T 2v5f_A 86 LK 87 (104)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 255
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.40 E-value=2.9e-06 Score=71.27 Aligned_cols=77 Identities=17% Similarity=0.176 Sum_probs=68.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 007075 65 FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN-------PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAG 137 (619)
Q Consensus 65 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~-------p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~ 137 (619)
.+.-.+.+|..++..|+|..|+.+|++|++.. +....++.+||.++.++|++++|+.+++++++++|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 34567889999999999999999999999974 34578999999999999999999999999999999999887
Q ss_pred HHHH
Q 007075 138 QNRL 141 (619)
Q Consensus 138 ~~~~ 141 (619)
.|+.
T Consensus 84 ~n~~ 87 (104)
T 2v5f_A 84 GNLK 87 (104)
T ss_dssp HHHH
T ss_pred hhHH
Confidence 7743
No 256
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.38 E-value=3.2e-07 Score=96.45 Aligned_cols=260 Identities=13% Similarity=0.068 Sum_probs=147.1
Q ss_pred HHHHHHhHhCCccEEEeCCCCCCCCcchhhccCCcceeEecccCCCCCCCCCccE------------EEecCCCCCCCcc
Q 007075 254 KKVAAMVREDKIDILVELTGHTANNKLGMMACQPAPVQVTWIGYPNTTGLPTIDY------------RITDSLADPPETK 321 (619)
Q Consensus 254 ~~~~~~i~~d~~Dilvdl~g~t~~~r~~~~a~r~Apvq~~~~G~p~ttg~~~~Dy------------~i~d~~~~p~~~~ 321 (619)
.++.+.+++.++|+++-..+-+. .-. .++++-..|-+...-. |+.+.|- .++|-++.|.+..
T Consensus 84 ~~l~~~l~~~kPD~Vlv~gd~~~-~~a-alaA~~~~IPv~h~ea----glrs~~~~~pee~nR~~~~~~a~~~~~~te~~ 157 (385)
T 4hwg_A 84 EKVDEVLEKEKPDAVLFYGDTNS-CLS-AIAAKRRKIPIFHMEA----GNRCFDQRVPEEINRKIIDHISDVNITLTEHA 157 (385)
T ss_dssp HHHHHHHHHHCCSEEEEESCSGG-GGG-HHHHHHTTCCEEEESC----CCCCSCTTSTHHHHHHHHHHHCSEEEESSHHH
T ss_pred HHHHHHHHhcCCcEEEEECCchH-HHH-HHHHHHhCCCEEEEeC----CCccccccCcHHHHHHHHHhhhceeecCCHHH
Confidence 36788899999999986543322 222 3333223222322111 2222220 1122233343321
Q ss_pred -------CCCccceEEcCCCccc---cC-CCCCCCCCCCCCCCCCCCeEEEecCCCC-----cCCHHHHHHHHHHHHHCC
Q 007075 322 -------QKHVEELIRLPECFLC---YT-PSPEAGPVCPTPALTNGFITFGSFNNLA-----KITPKVLQVWARILCAVP 385 (619)
Q Consensus 322 -------~~~~E~l~~lp~~~~~---~~-p~~~~~~~~~~~~l~~~~~~f~~~~~~~-----K~~~~~~~~~~~il~~~P 385 (619)
+.-.|++....+..+. +. +.......+...+++++.+++.+.+|.. |..+.+++++.++.++.
T Consensus 158 ~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~- 236 (385)
T 4hwg_A 158 RRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEY- 236 (385)
T ss_dssp HHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-
Confidence 2234677777664322 11 0001111122234555667777887753 44567888888887766
Q ss_pred CceEEEeccCCCCHHHHHHHHHHHHHc-C-CC-CCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCc
Q 007075 386 NSRLVVKCKPFCCDSVRHRFLSTLEQL-G-LE-SLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVP 462 (619)
Q Consensus 386 ~a~l~l~g~~~~~~~~~~~l~~~~~~~-G-i~-~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvP 462 (619)
+..+++... +. +++.+++. | +. .++|.|.+.+. ..++..+++.||+++..+ || .+.||+++|+|
T Consensus 237 ~~~vv~p~~----p~----~~~~l~~~~~~~~~~~~v~l~~~lg-~~~~~~l~~~adlvvt~S---Gg-v~~EA~alG~P 303 (385)
T 4hwg_A 237 NFLIIFSTH----PR----TKKRLEDLEGFKELGDKIRFLPAFS-FTDYVKLQMNAFCILSDS---GT-ITEEASILNLP 303 (385)
T ss_dssp CCEEEEEEC----HH----HHHHHHTSGGGGGTGGGEEECCCCC-HHHHHHHHHHCSEEEECC---TT-HHHHHHHTTCC
T ss_pred CeEEEEECC----hH----HHHHHHHHHHHhcCCCCEEEEcCCC-HHHHHHHHHhCcEEEECC---cc-HHHHHHHcCCC
Confidence 666666432 23 44555555 5 32 36899988876 578999999999999433 44 56999999999
Q ss_pred EEeccCCccccchhHHHHHhcCCCccccCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHH
Q 007075 463 CVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTY 540 (619)
Q Consensus 463 vVt~~g~~~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y 540 (619)
||++...+ .|.- .+ ..|-.-+|..|.++.++.+.+|..|+..++++++...... ..-...+++++.++..+
T Consensus 304 vv~~~~~t--er~e--~v-~~G~~~lv~~d~~~i~~ai~~ll~d~~~~~~m~~~~~~~~--g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 304 ALNIREAH--ERPE--GM-DAGTLIMSGFKAERVLQAVKTITEEHDNNKRTQGLVPDYN--EAGLVSKKILRIVLSYV 374 (385)
T ss_dssp EEECSSSC--SCTH--HH-HHTCCEECCSSHHHHHHHHHHHHTTCBTTBCCSCCCHHHH--TCCCHHHHHHHHHHHHH
T ss_pred EEEcCCCc--cchh--hh-hcCceEEcCCCHHHHHHHHHHHHhChHHHHHhhccCCCCC--CCChHHHHHHHHHHHHh
Confidence 99976532 1211 12 2365545557999999999999999876655444332210 12234566666666544
No 257
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.33 E-value=6.8e-06 Score=92.42 Aligned_cols=149 Identities=11% Similarity=0.063 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHH-HHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 007075 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAV-ECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93 (619)
Q Consensus 15 ~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~-~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al 93 (619)
+.....|++++...|.++..|+..+..+...|+.++|. +.|++|+..+|.+...|..++......|++++|.+.|++++
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l 405 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCI 405 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 34566788888888888888888888777777777776 88888888888777777777877777888888888888777
Q ss_pred Hh-----------CCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHhhc-
Q 007075 94 AA-----------NPT-----------YAEAYNNLGVLYRDAGSISLAIDAYEQCLKI-DPDSRNAGQNRLLAMNYINE- 149 (619)
Q Consensus 94 ~~-----------~p~-----------~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-~P~~~~a~~~~~la~~~~~~- 149 (619)
+. .|. ...+|..++.+....|+.+.|...|.+|++. .+.....+.. .+......
T Consensus 406 ~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~--~A~lE~~~~ 483 (679)
T 4e6h_A 406 DRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLE--NAYIEYHIS 483 (679)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHH--HHHHHHTTT
T ss_pred HHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHH--HHHHHHHhC
Confidence 64 242 3446777777777777788888888888776 3233333332 23222222
Q ss_pred CCcHHHHHHHHHHHHH
Q 007075 150 GHDDKLFEAHRDWGKR 165 (619)
Q Consensus 150 g~~~~a~~~~~~~~~~ 165 (619)
++.+.+...++...+.
T Consensus 484 ~d~e~Ar~ife~~Lk~ 499 (679)
T 4e6h_A 484 KDTKTACKVLELGLKY 499 (679)
T ss_dssp SCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 3356665555554444
No 258
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.33 E-value=4.3e-06 Score=89.45 Aligned_cols=160 Identities=10% Similarity=0.027 Sum_probs=103.3
Q ss_pred CCCeEEEecCCCC-------cCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccC
Q 007075 355 NGFITFGSFNNLA-------KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILL 427 (619)
Q Consensus 355 ~~~~~f~~~~~~~-------K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~ 427 (619)
+..+++.++++.. |....+++++. +. +.++++.+++.. .+.+ . ++ +++|.+.++++
T Consensus 266 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~----~~-~~~~v~~~g~~~----~~~l----~--~~-~~~v~~~~~~~- 328 (441)
T 2yjn_A 266 ERRRVCLTLGISSRENSIGQVSIEELLGAVG----DV-DAEIIATFDAQQ----LEGV----A--NI-PDNVRTVGFVP- 328 (441)
T ss_dssp SSCEEEEEC----------CCSTTTTHHHHH----TS-SSEEEECCCTTT----TSSC----S--SC-CSSEEECCSCC-
T ss_pred CCCEEEEECCCCcccccChHHHHHHHHHHHH----cC-CCEEEEEECCcc----hhhh----c--cC-CCCEEEecCCC-
Confidence 4466788888763 44455555543 33 567776554311 1111 1 34 37899999986
Q ss_pred cHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccC---CHHHHHHHHHHhh
Q 007075 428 NHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK---NEDEYVQLALQLA 504 (619)
Q Consensus 428 ~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~---~~~~y~~~a~~L~ 504 (619)
.. .++..||+|+. .+|.+|++|||++|+|+|..+-... ....+..+...|..-.+.. +.++..+.+.+++
T Consensus 329 ~~---~ll~~ad~~V~---~~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll 401 (441)
T 2yjn_A 329 MH---ALLPTCAATVH---HGGPGSWHTAAIHGVPQVILPDGWD-TGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVL 401 (441)
T ss_dssp HH---HHGGGCSEEEE---CCCHHHHHHHHHTTCCEEECCCSHH-HHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHH
T ss_pred HH---HHHhhCCEEEE---CCCHHHHHHHHHhCCCEEEeCCccc-HHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHh
Confidence 33 45788999994 3677899999999999998865211 1123455666676655542 7889999999999
Q ss_pred cCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 007075 505 SDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYR 541 (619)
Q Consensus 505 ~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~ 541 (619)
.|++.++++++..++. .. ....++.++.+|+.+.
T Consensus 402 ~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 402 DDPAHRAGAARMRDDM-LA--EPSPAEVVGICEELAA 435 (441)
T ss_dssp HCHHHHHHHHHHHHHH-HT--SCCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH-Hc--CCCHHHHHHHHHHHHH
Confidence 9999888877665543 22 2467888888877654
No 259
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.32 E-value=1.9e-06 Score=91.75 Aligned_cols=99 Identities=8% Similarity=-0.010 Sum_probs=77.1
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCH---HHH
Q 007075 6 VAYGEMLKFDMAIVFYELAFHF-----NPHC---AEACNNLGVIYKDRDNLDKAVECYQMALSI-----KPNFS---QSL 69 (619)
Q Consensus 6 ~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~la~~~~~~g~~~~A~~~~~~al~l-----~p~~~---~~~ 69 (619)
..+..+|+|++|+..|+++++. .|++ ...+.++|.+|..+|+|++|+.++++++++ -|+++ ..+
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l 374 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQV 374 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHH
Confidence 3456788899999999999874 3444 457888999999999999999999999875 34444 468
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHH
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAIAA-----NPTYAEAYN 104 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al~~-----~p~~~~a~~ 104 (619)
++||.+|..+|++++|+.+|++|+++ .|+++....
T Consensus 375 ~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 414 (429)
T 3qwp_A 375 MKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIED 414 (429)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 88999999999999999999999888 466665443
No 260
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.24 E-value=1.4e-05 Score=84.71 Aligned_cols=157 Identities=9% Similarity=-0.006 Sum_probs=98.4
Q ss_pred CeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcc
Q 007075 357 FITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS 436 (619)
Q Consensus 357 ~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~ 436 (619)
.++|.++|+.. .....++...+.+++.+.-.+|+.|.+.. . ..++ +++|.+.++++ .. .++.
T Consensus 239 ~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~--~----------~~~~-~~~v~~~~~~~-~~---~~l~ 300 (415)
T 1iir_A 239 PPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADL--V----------LPDD-GADCFAIGEVN-HQ---VLFG 300 (415)
T ss_dssp CCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTC--C----------CSSC-GGGEEECSSCC-HH---HHGG
T ss_pred CeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCcc--c----------ccCC-CCCEEEeCcCC-hH---HHHh
Confidence 56788888875 44666776666777766444444464311 0 0233 37899999987 33 3468
Q ss_pred cCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCcccc---CCHHHHHHHHHHhhcCHHHHHHH
Q 007075 437 LMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA---KNEDEYVQLALQLASDVTALANL 513 (619)
Q Consensus 437 ~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~---~~~~~y~~~a~~L~~d~~~~~~l 513 (619)
.||+|+. .+|.+|++|||++|+|+|+.+-.. -....+..+...|..-.+. -+.++..+.+.++ .|++.++++
T Consensus 301 ~~d~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~-dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~ 375 (415)
T 1iir_A 301 RVAAVIH---HGGAGTTHVAARAGAPQILLPQMA-DQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPETHARA 375 (415)
T ss_dssp GSSEEEE---CCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHH
T ss_pred hCCEEEe---CCChhHHHHHHHcCCCEEECCCCC-ccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHH
Confidence 9999994 366789999999999999876421 1112345566667655454 2788999999999 998877766
Q ss_pred HHHHHHHhhcCCCCChHHHHHHHHHH
Q 007075 514 RMSLRDLMSKSPVCDGQNFALGLEST 539 (619)
Q Consensus 514 r~~~r~~~~~~~~~~~~~~~~~le~~ 539 (619)
++..++. . ..-..++.++.+|+.
T Consensus 376 ~~~~~~~-~--~~~~~~~~~~~i~~~ 398 (415)
T 1iir_A 376 TAVAGTI-R--TDGAAVAARLLLDAV 398 (415)
T ss_dssp HHHHHHS-C--SCHHHHHHHHHHHHH
T ss_pred HHHHHHH-h--hcChHHHHHHHHHHH
Confidence 6554432 1 122344445545443
No 261
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.23 E-value=1.4e-05 Score=89.81 Aligned_cols=162 Identities=10% Similarity=-0.019 Sum_probs=128.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----------CCC-----------cHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHF-----------NPH-----------CAEACNNLGVIYKDRDNLDKAVECYQMAL 59 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~-----------~p~-----------~~~a~~~la~~~~~~g~~~~A~~~~~~al 59 (619)
+..+......|++++|...|++++.. .|. ...+|..++....+.|+.+.|...|.+|+
T Consensus 382 l~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~ 461 (679)
T 4e6h_A 382 FSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCR 461 (679)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35667778899999999999999975 253 35578888888889999999999999999
Q ss_pred hh-CCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CH-
Q 007075 60 SI-KPNFSQSLNNLGVVYTVQG-KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD--SR- 134 (619)
Q Consensus 60 ~l-~p~~~~~~~~lg~~~~~~g-~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~--~~- 134 (619)
+. .+.....+...+.+....+ +++.|...|+++++..|+++..+..++......|+.+.|...|++++...|+ ..
T Consensus 462 ~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~ 541 (679)
T 4e6h_A 462 RLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLK 541 (679)
T ss_dssp HTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHH
T ss_pred HhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHH
Confidence 88 4445677777787777765 4999999999999999999999999999999999999999999999999884 22
Q ss_pred HHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 007075 135 NAGQNRLLAMNYINEGHDDKLFEAHRDWGKR 165 (619)
Q Consensus 135 ~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~ 165 (619)
..+.. ....-...|+.+.+....++..+.
T Consensus 542 ~lw~~--~~~fE~~~G~~~~~~~v~~R~~~~ 570 (679)
T 4e6h_A 542 MIFQK--VIFFESKVGSLNSVRTLEKRFFEK 570 (679)
T ss_dssp HHHHH--HHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHHcCCHHHHHHHHHHHHHh
Confidence 22222 333334568887766665555444
No 262
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=98.20 E-value=3.9e-06 Score=86.37 Aligned_cols=133 Identities=14% Similarity=0.089 Sum_probs=94.0
Q ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHh
Q 007075 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQA 434 (619)
Q Consensus 355 ~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~ 434 (619)
.+..+++-.|++.|. ..+..+ .|+.+|+|+|+|... .+ .+|+|+|+++ .++....
T Consensus 176 ~~~~~i~yaG~l~k~--~~L~~l------~~~~~f~ivG~G~~~--------------~l--~nV~f~G~~~-~~el~~~ 230 (339)
T 3rhz_A 176 GLKREIHFPGNPERF--SFVKEW------KYDIPLKVYTWQNVE--------------LP--QNVHKINYRP-DEQLLME 230 (339)
T ss_dssp EEEEEEEECSCTTTC--GGGGGC------CCSSCEEEEESCCCC--------------CC--TTEEEEECCC-HHHHHHH
T ss_pred CCCcEEEEeCCcchh--hHHHhC------CCCCeEEEEeCCccc--------------Cc--CCEEEeCCCC-HHHHHHH
Confidence 344677888888872 222222 489999999987321 23 3899999998 7889989
Q ss_pred cccCcEeecCCC--------CCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCccccCCHHHHHHHHHHhhcC
Q 007075 435 YSLMDISLDTFP--------YAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506 (619)
Q Consensus 435 ~~~~Dv~Ldt~~--------~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d 506 (619)
++.+|+.|-... ++.+.-+.|+|++|+|||+..... .+.++...++ ++++++.+++++....+ +
T Consensus 231 l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~-----~~~~v~~~~~-G~~~~~~~e~~~~i~~l--~ 302 (339)
T 3rhz_A 231 MSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIA-----NQELIENNGL-GWIVKDVEEAIMKVKNV--N 302 (339)
T ss_dssp HHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCT-----TTHHHHHHTC-EEEESSHHHHHHHHHHC--C
T ss_pred HHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChh-----HHHHHHhCCe-EEEeCCHHHHHHHHHHh--C
Confidence 977777665411 344678999999999999865432 2344554444 56677889998888876 4
Q ss_pred HHHHHHHHHHHHHH
Q 007075 507 VTALANLRMSLRDL 520 (619)
Q Consensus 507 ~~~~~~lr~~~r~~ 520 (619)
++.+++|++..++.
T Consensus 303 ~~~~~~m~~na~~~ 316 (339)
T 3rhz_A 303 EDEYIELVKNVRSF 316 (339)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67788898888764
No 263
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.17 E-value=2.8e-05 Score=79.89 Aligned_cols=138 Identities=16% Similarity=0.078 Sum_probs=100.9
Q ss_pred HHHHhCCCcHHHH--HHHHHHHHHcC---CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH-------HHHHH-HH
Q 007075 23 LAFHFNPHCAEAC--NNLGVIYKDRD---NLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKM-------DAAAE-MI 89 (619)
Q Consensus 23 ~al~~~p~~~~a~--~~la~~~~~~g---~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~-------~eA~~-~~ 89 (619)
++....|.+..+| +..|..+...+ +..+|+.+|++|++++|+++.++..++.+|.....+ .+++. .+
T Consensus 185 r~~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~ 264 (372)
T 3ly7_A 185 TLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEI 264 (372)
T ss_dssp HHHHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHhccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHH
Confidence 3444566665544 45566555544 458999999999999999999999888887532111 11111 22
Q ss_pred H--HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 007075 90 E--KAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWG 163 (619)
Q Consensus 90 ~--~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~ 163 (619)
+ .++..+|..+.++..++..+...|++++|+..+++++.++|+ .. ...+++..+...|+.+++.+.+.+..
T Consensus 265 ~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~--a~~llG~~~~~~G~~~eA~e~~~~Al 337 (372)
T 3ly7_A 265 DNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WL--NYVLLGKVYEMKGMNREAADAYLTAF 337 (372)
T ss_dssp HHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HH--HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HH--HHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 2 123557999999999999999999999999999999999975 33 33457888899999999988876543
No 264
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.10 E-value=9.3e-06 Score=80.14 Aligned_cols=87 Identities=15% Similarity=0.203 Sum_probs=80.0
Q ss_pred CHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHH-cCCHH
Q 007075 13 KFDMAIVFYELAFHFNPH--CAEACNNLGVIYKDR-----DNLDKAVECYQMALSIKPNF-SQSLNNLGVVYTV-QGKMD 83 (619)
Q Consensus 13 ~~~~A~~~~~~al~~~p~--~~~a~~~la~~~~~~-----g~~~~A~~~~~~al~l~p~~-~~~~~~lg~~~~~-~g~~~ 83 (619)
...+|...++++++++|+ +..+|..+|.+|... |+.++|.++|++|++++|+. ...++.+|..+.. +|+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 367899999999999999 677999999999995 99999999999999999975 9999999999987 59999
Q ss_pred HHHHHHHHHHHhCCCC
Q 007075 84 AAAEMIEKAIAANPTY 99 (619)
Q Consensus 84 eA~~~~~~al~~~p~~ 99 (619)
+|..+++++++..|..
T Consensus 258 ~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 258 GFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999998873
No 265
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.04 E-value=3.8e-05 Score=81.35 Aligned_cols=137 Identities=7% Similarity=-0.057 Sum_probs=89.1
Q ss_pred CeEEEecCCCCc-CCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhc
Q 007075 357 FITFGSFNNLAK-ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435 (619)
Q Consensus 357 ~~~f~~~~~~~K-~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~ 435 (619)
.++|.++++... .....++...+.+++.+--.+|..|.+. . . . ..+ +++|.+.++++ .. .++
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~-~-~----~------~~~-~~~v~~~~~~~-~~---~ll 300 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTE-L-V----L------PDD-RDDCFAIDEVN-FQ---ALF 300 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTT-C-C----C------SCC-CTTEEEESSCC-HH---HHG
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcc-c-c----c------cCC-CCCEEEeccCC-hH---HHh
Confidence 567888888743 3345555556666666533334445431 1 0 0 134 37899999986 33 456
Q ss_pred ccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCcccc---CCHHHHHHHHHHhhcCHHHHHH
Q 007075 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA---KNEDEYVQLALQLASDVTALAN 512 (619)
Q Consensus 436 ~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~---~~~~~y~~~a~~L~~d~~~~~~ 512 (619)
..||+|+. .+|.+|++||+++|+|+|+.+-..- ....+..+...|..-.+. .+.++..+.+.++ .|++.+++
T Consensus 301 ~~~d~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~ 375 (416)
T 1rrv_A 301 RRVAAVIH---HGSAGTEHVATRAGVPQLVIPRNTD-QPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPETRAR 375 (416)
T ss_dssp GGSSEEEE---CCCHHHHHHHHHHTCCEEECCCSBT-HHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHH
T ss_pred ccCCEEEe---cCChhHHHHHHHcCCCEEEccCCCC-cHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHH
Confidence 88999994 4677899999999999998874211 122344566667665553 3788899989999 99876665
Q ss_pred HHH
Q 007075 513 LRM 515 (619)
Q Consensus 513 lr~ 515 (619)
+++
T Consensus 376 ~~~ 378 (416)
T 1rrv_A 376 AEA 378 (416)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 266
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=97.95 E-value=0.00012 Score=77.14 Aligned_cols=159 Identities=8% Similarity=-0.032 Sum_probs=98.6
Q ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHh
Q 007075 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQA 434 (619)
Q Consensus 355 ~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~ 434 (619)
+..+++.++++... ..++++...+.+.+.+--.+|..|.+ ..+ ..+. +++|.+.++++ . ..+
T Consensus 220 ~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~-~~~-----------~~~~-~~~v~~~~~~~-~---~~l 281 (404)
T 3h4t_A 220 GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWA-GLG-----------RIDE-GDDCLVVGEVN-H---QVL 281 (404)
T ss_dssp SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTT-TCC-----------CSSC-CTTEEEESSCC-H---HHH
T ss_pred CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCc-ccc-----------cccC-CCCEEEecCCC-H---HHH
Confidence 44667888888865 55667777777777654334433422 110 1133 47899999976 3 345
Q ss_pred cccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCcccc---CCHHHHHHHHHHhhcCHHHHH
Q 007075 435 YSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA---KNEDEYVQLALQLASDVTALA 511 (619)
Q Consensus 435 ~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~---~~~~~y~~~a~~L~~d~~~~~ 511 (619)
+..+|+++ ..+|..|+.||+++|+|+|.++-.. -....+..+...|....+. .+.+++.+.+.++.+ ++.++
T Consensus 282 l~~~d~~v---~~gG~~t~~Eal~~GvP~v~~p~~~-dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~ 356 (404)
T 3h4t_A 282 FGRVAAVV---HHGGAGTTTAVTRAGAPQVVVPQKA-DQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT-PGIRA 356 (404)
T ss_dssp GGGSSEEE---ECCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHH
T ss_pred HhhCcEEE---ECCcHHHHHHHHHcCCCEEEcCCcc-cHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHH
Confidence 56799999 2355689999999999999876321 1223345566677765543 278899999999988 76655
Q ss_pred HHHHHHHHHhhcCCCCChHHHHHHHHHHH
Q 007075 512 NLRMSLRDLMSKSPVCDGQNFALGLESTY 540 (619)
Q Consensus 512 ~lr~~~r~~~~~~~~~~~~~~~~~le~~y 540 (619)
++++..+. +. . -..++.++.+|..+
T Consensus 357 ~~~~~~~~-~~--~-~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 357 RAAAVAGT-IR--T-DGTTVAAKLLLEAI 381 (404)
T ss_dssp HHHHHHTT-CC--C-CHHHHHHHHHHHHH
T ss_pred HHHHHHHH-Hh--h-hHHHHHHHHHHHHH
Confidence 54443321 11 1 23445555555543
No 267
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.92 E-value=8.9e-05 Score=63.80 Aligned_cols=94 Identities=12% Similarity=0.037 Sum_probs=76.4
Q ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCCHHHHH
Q 007075 46 DNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDA---AAEMIEKAIAAN-P-TYAEAYNNLGVLYRDAGSISLAI 120 (619)
Q Consensus 46 g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~e---A~~~~~~al~~~-p-~~~~a~~~Lg~~~~~~g~~~eA~ 120 (619)
.....+.+.|.+.+..++...++.+++|.++....+..+ ++..++..++.+ | ..-++++.||..++++|+|++|.
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 345667777888887778888888888888888777655 888888888876 4 45678899999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHH
Q 007075 121 DAYEQCLKIDPDSRNAGQN 139 (619)
Q Consensus 121 ~~~~~al~~~P~~~~a~~~ 139 (619)
.+++.+|+++|++..+..-
T Consensus 95 ~~~~~lL~~eP~n~QA~~L 113 (126)
T 1nzn_A 95 KYVRGLLQTEPQNNQAKEL 113 (126)
T ss_dssp HHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHH
Confidence 9999999999998877554
No 268
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=97.85 E-value=0.0002 Score=77.38 Aligned_cols=150 Identities=15% Similarity=0.150 Sum_probs=97.4
Q ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCC-C-H-HHHHHHHHHHHHcCCCCCcEEEcCCccCcHHH
Q 007075 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC-C-D-SVRHRFLSTLEQLGLESLRVDLLPLILLNHDH 431 (619)
Q Consensus 355 ~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~-~-~-~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~ 431 (619)
+..++|.|||+........+...+..|...+.-.+|.++.... + . .+.+.+.+. + ++++.+.+++| +.
T Consensus 294 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-----~-~~~~~v~~~~p-q~-- 364 (482)
T 2pq6_A 294 PGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNE-----I-ADRGLIASWCP-QD-- 364 (482)
T ss_dssp TTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHH-----H-TTTEEEESCCC-HH--
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHh-----c-CCCEEEEeecC-HH--
Confidence 4568899999987666776777777788777666777664310 0 0 011233222 2 37888999987 33
Q ss_pred HHhccc--CcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHH-hcCCCcccc--CCHHHHHHHHHHhhcC
Q 007075 432 MQAYSL--MDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLT-KVGLKHLIA--KNEDEYVQLALQLASD 506 (619)
Q Consensus 432 ~~~~~~--~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~-~~gl~~~v~--~~~~~y~~~a~~L~~d 506 (619)
.++.. +|+|+ ..+|.+|++||+++|||+|+++-..- ....+..+. ..|..-.+. -+.++..+.+.++..|
T Consensus 365 -~~L~h~~~~~~v---th~G~~s~~Eal~~GvP~i~~P~~~d-Q~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~ 439 (482)
T 2pq6_A 365 -KVLNHPSIGGFL---THCGWNSTTESICAGVPMLCWPFFAD-QPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAG 439 (482)
T ss_dssp -HHHTSTTEEEEE---ECCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTS
T ss_pred -HHhcCCCCCEEE---ecCCcchHHHHHHcCCCEEecCcccc-hHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcC
Confidence 35544 55577 24788899999999999999875211 223345454 577765454 3788888888899999
Q ss_pred HHHHHHHHHHHHH
Q 007075 507 VTALANLRMSLRD 519 (619)
Q Consensus 507 ~~~~~~lr~~~r~ 519 (619)
++ .+.+|+++++
T Consensus 440 ~~-~~~~r~~a~~ 451 (482)
T 2pq6_A 440 DK-GKKMKQKAME 451 (482)
T ss_dssp HH-HHHHHHHHHH
T ss_pred Cc-HHHHHHHHHH
Confidence 85 3445555443
No 269
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=97.84 E-value=0.00024 Score=75.86 Aligned_cols=148 Identities=11% Similarity=0.063 Sum_probs=97.0
Q ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHH
Q 007075 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQ 433 (619)
Q Consensus 354 ~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~ 433 (619)
+++.++|.|||+.....++.+...+..|++.+--.||.++.. . .+.+-+.+.+. + ++|+.+.+++| +. .
T Consensus 271 ~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~----~-~~~lp~~~~~~-~-~~~~~vv~w~P-q~---~ 339 (454)
T 3hbf_A 271 ENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD----P-KEKLPKGFLER-T-KTKGKIVAWAP-QV---E 339 (454)
T ss_dssp CTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC----H-HHHSCTTHHHH-T-TTTEEEESSCC-HH---H
T ss_pred CCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc----c-hhcCCHhHHhh-c-CCceEEEeeCC-HH---H
Confidence 456789999999988888888888888888777777877643 1 11121112111 2 37888889987 33 4
Q ss_pred hcccCc--EeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHh-cCCCcccc---CCHHHHHHHHHHhhcCH
Q 007075 434 AYSLMD--ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTK-VGLKHLIA---KNEDEYVQLALQLASDV 507 (619)
Q Consensus 434 ~~~~~D--v~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~-~gl~~~v~---~~~~~y~~~a~~L~~d~ 507 (619)
++..+| +|+ ..+|.+|++||+++|||+|+++--. -....+..+.. .|..-.+. -+.++..+...++..|+
T Consensus 340 vL~h~~v~~fv---tH~G~~S~~Eal~~GvP~i~~P~~~-DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~ 415 (454)
T 3hbf_A 340 ILKHSSVGVFL---THSGWNSVLECIVGGVPMISRPFFG-DQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSE 415 (454)
T ss_dssp HHHSTTEEEEE---ECCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSH
T ss_pred HHhhcCcCeEE---ecCCcchHHHHHHcCCCEecCcccc-cHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCC
Confidence 445566 777 2477789999999999999987421 12233455555 47654443 36788888888888874
Q ss_pred HHHHHHHHHH
Q 007075 508 TALANLRMSL 517 (619)
Q Consensus 508 ~~~~~lr~~~ 517 (619)
..+.+|+++
T Consensus 416 -~~~~~r~~a 424 (454)
T 3hbf_A 416 -KGGIMRQKI 424 (454)
T ss_dssp -HHHHHHHHH
T ss_pred -hHHHHHHHH
Confidence 223344443
No 270
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=97.84 E-value=0.00013 Score=78.41 Aligned_cols=149 Identities=15% Similarity=0.076 Sum_probs=97.4
Q ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHH
Q 007075 354 TNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQ 433 (619)
Q Consensus 354 ~~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~ 433 (619)
+++.++|.|||+.....++.+......++..+--.+|..|... .+.+.+.+.+. + ++++.+.+++| +. .
T Consensus 269 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~-~~~l~~~~~~~-----~-~~~~~v~~w~p-q~---~ 337 (456)
T 2c1x_A 269 KPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA-RVHLPEGFLEK-----T-RGYGMVVPWAP-QA---E 337 (456)
T ss_dssp CTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG-GGGSCTTHHHH-----H-TTTEEEESCCC-HH---H
T ss_pred CCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc-hhhCCHHHHhh-----c-CCceEEecCCC-HH---H
Confidence 3567899999998777777777777777666655677766431 00111122221 1 36888889987 33 3
Q ss_pred hcc--cCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHHHhc-CCCcccc---CCHHHHHHHHHHhhcCH
Q 007075 434 AYS--LMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKV-GLKHLIA---KNEDEYVQLALQLASDV 507 (619)
Q Consensus 434 ~~~--~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~-gl~~~v~---~~~~~y~~~a~~L~~d~ 507 (619)
.+. .+|+|+ ..+|.+|++||+++|||+|+++--. -....+..+... |..-.+. -+.++..+...++..|+
T Consensus 338 vL~h~~~~~fv---th~G~~S~~Eal~~GvP~i~~P~~~-dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~ 413 (456)
T 2c1x_A 338 VLAHEAVGAFV---THCGWNSLWESVAGGVPLICRPFFG-DQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQE 413 (456)
T ss_dssp HHTSTTEEEEE---ECCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSH
T ss_pred HhcCCcCCEEE---ecCCcchHHHHHHhCceEEecCChh-hHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCC
Confidence 444 688988 2588899999999999999987521 122345566665 7765453 36788888888888887
Q ss_pred HHHHHHHHHHH
Q 007075 508 TALANLRMSLR 518 (619)
Q Consensus 508 ~~~~~lr~~~r 518 (619)
+ .+.+|++++
T Consensus 414 ~-~~~~r~~a~ 423 (456)
T 2c1x_A 414 K-GKKLRENLR 423 (456)
T ss_dssp H-HHHHHHHHH
T ss_pred c-HHHHHHHHH
Confidence 4 344555444
No 271
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.76 E-value=0.00026 Score=60.84 Aligned_cols=98 Identities=7% Similarity=-0.065 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHH---HHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHHH
Q 007075 12 LKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDK---AVECYQMALSIK-P-NFSQSLNNLGVVYTVQGKMDAAA 86 (619)
Q Consensus 12 g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~---A~~~~~~al~l~-p-~~~~~~~~lg~~~~~~g~~~eA~ 86 (619)
.....+...|.+.+..++....+.+++|.++....+... ++.+++..+..+ | ..-+.++.||..+++.|+|++|.
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 345667788888888888999999999999999887766 999999999876 5 56679999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHH
Q 007075 87 EMIEKAIAANPTYAEAYNNLGVL 109 (619)
Q Consensus 87 ~~~~~al~~~p~~~~a~~~Lg~~ 109 (619)
.+++..++..|++..+......+
T Consensus 95 ~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 95 KYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999998887655443
No 272
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.71 E-value=0.002 Score=69.78 Aligned_cols=156 Identities=12% Similarity=0.088 Sum_probs=121.3
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHhhC-CCCHHHHHHHHH
Q 007075 6 VAYGEMLKFDMAIVFYELAFHFN-PHCAEACNNLGVIYKDRD---------NLDKAVECYQMALSIK-PNFSQSLNNLGV 74 (619)
Q Consensus 6 ~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~la~~~~~~g---------~~~~A~~~~~~al~l~-p~~~~~~~~lg~ 74 (619)
..+.+.|+.++|++.|++..+.. .-+...|..+-.++...+ +.++|.+.|++..+.. .-+...+..+-.
T Consensus 34 d~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~ 113 (501)
T 4g26_A 34 DMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGAR 113 (501)
T ss_dssp HHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 45667899999999999988753 224566776666665444 3788999999887653 235678888999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhhcCC
Q 007075 75 VYTVQGKMDAAAEMIEKAIAAN-PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI--DPDSRNAGQNRLLAMNYINEGH 151 (619)
Q Consensus 75 ~~~~~g~~~eA~~~~~~al~~~-p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~--~P~~~~a~~~~~la~~~~~~g~ 151 (619)
.|.+.|++++|...+++..+.. .-+...|+.+-..|.+.|+.++|.+.|++..+. .|+. .....+...+...|+
T Consensus 114 ~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~---~ty~~Li~~~~~~g~ 190 (501)
T 4g26_A 114 LAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEE---PELAALLKVSMDTKN 190 (501)
T ss_dssp HHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCH---HHHHHHHHHHHHTTC
T ss_pred HHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHhhCCC
Confidence 9999999999999999988763 235778999999999999999999999999875 3442 222346678889999
Q ss_pred cHHHHHHHHHHHH
Q 007075 152 DDKLFEAHRDWGK 164 (619)
Q Consensus 152 ~~~a~~~~~~~~~ 164 (619)
.+++.+.+++..+
T Consensus 191 ~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 191 ADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999988877643
No 273
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=97.70 E-value=0.00078 Score=72.33 Aligned_cols=145 Identities=14% Similarity=0.089 Sum_probs=91.5
Q ss_pred CCCeEEEecCCCC-cCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHH
Q 007075 355 NGFITFGSFNNLA-KITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQ 433 (619)
Q Consensus 355 ~~~~~f~~~~~~~-K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~ 433 (619)
++.++|.|||+.. .++.+.+...+..|+..+--.+|..|.+ .+.+.+.+.+.... ++++.+.+++| +.+.+
T Consensus 275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~--~~~l~~~~~~~~~~----~~~~~v~~w~p-q~~vL- 346 (463)
T 2acv_A 275 DKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE--KKVFPEGFLEWMEL----EGKGMICGWAP-QVEVL- 346 (463)
T ss_dssp TTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC--GGGSCTTHHHHHHH----HCSEEEESSCC-HHHHH-
T ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC--cccCChhHHHhhcc----CCCEEEEccCC-HHHHh-
Confidence 5678999999988 7777777777777877666666666642 00111122222110 25788888887 33322
Q ss_pred hcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHH-HHhcCCCcccc---------CCHHHHHHHHHHh
Q 007075 434 AYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSL-LTKVGLKHLIA---------KNEDEYVQLALQL 503 (619)
Q Consensus 434 ~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~-l~~~gl~~~v~---------~~~~~y~~~a~~L 503 (619)
....+|+|+ ..+|.+|++||+++|||+|+++-..-. ...+.. +...|..-.+. -+.++..+...++
T Consensus 347 ~h~~~~~fv---th~G~~s~~Eal~~GvP~i~~P~~~dQ-~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~l 422 (463)
T 2acv_A 347 AHKAIGGFV---SHCGWNSILESMWFGVPILTWPIYAEQ-QLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDL 422 (463)
T ss_dssp HSTTEEEEE---ECCCHHHHHHHHHTTCCEEECCCSTTH-HHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHH
T ss_pred CCCccCeEE---ecCCchhHHHHHHcCCCeeeccchhhh-HHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHH
Confidence 224688888 248889999999999999998752211 233444 46777765551 2567777777777
Q ss_pred hc-CHHHHH
Q 007075 504 AS-DVTALA 511 (619)
Q Consensus 504 ~~-d~~~~~ 511 (619)
.. +++.++
T Consensus 423 l~~~~~~r~ 431 (463)
T 2acv_A 423 MDKDSIVHK 431 (463)
T ss_dssp TCTTCTHHH
T ss_pred HhccHHHHH
Confidence 76 344443
No 274
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.63 E-value=0.0017 Score=70.35 Aligned_cols=138 Identities=9% Similarity=0.005 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH------------------
Q 007075 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVV------------------ 75 (619)
Q Consensus 14 ~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~------------------ 75 (619)
.+.....|++++...|..+..|...+..+...|+.++|...|++|+.. |.+...+...+..
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~ 273 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGE 273 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhc
Confidence 345678999999999999999999999999999999999999999999 9876555443332
Q ss_pred ----------------------HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCC
Q 007075 76 ----------------------YTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG-SISLAIDAYEQCLKIDPD 132 (619)
Q Consensus 76 ----------------------~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g-~~~eA~~~~~~al~~~P~ 132 (619)
+.+.+..+.|...|++| +..+.....|...+.+....+ +.+.|...|+++++..|+
T Consensus 274 ~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~ 352 (493)
T 2uy1_A 274 AESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD 352 (493)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT
T ss_pred cchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC
Confidence 22345566677777777 322224455555555555544 477777777777777776
Q ss_pred CHHHHHHHHHHHHHhhcCCcHHH
Q 007075 133 SRNAGQNRLLAMNYINEGHDDKL 155 (619)
Q Consensus 133 ~~~a~~~~~la~~~~~~g~~~~a 155 (619)
.+..+.. .+......|+.+.+
T Consensus 353 ~~~~~~~--yid~e~~~~~~~~a 373 (493)
T 2uy1_A 353 STLLKEE--FFLFLLRIGDEENA 373 (493)
T ss_dssp CHHHHHH--HHHHHHHHTCHHHH
T ss_pred CHHHHHH--HHHHHHHcCCHHHH
Confidence 6554333 22223344544443
No 275
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.53 E-value=0.0015 Score=57.43 Aligned_cols=109 Identities=11% Similarity=0.076 Sum_probs=94.4
Q ss_pred hCCCcHHHHHHHHHHHHHcCCH------HHHHHHHHHHHhhCCCC--------HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007075 27 FNPHCAEACNNLGVIYKDRDNL------DKAVECYQMALSIKPNF--------SQSLNNLGVVYTVQGKMDAAAEMIEKA 92 (619)
Q Consensus 27 ~~p~~~~a~~~la~~~~~~g~~------~~A~~~~~~al~l~p~~--------~~~~~~lg~~~~~~g~~~eA~~~~~~a 92 (619)
..|++++.|..........|+. ++-++.|++|+..-|-. ...|.+.+.. ...++.++|.+.|+.+
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a 86 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMA 86 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 5799999999999999999999 89999999999876642 3366777755 5669999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 007075 93 IAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136 (619)
Q Consensus 93 l~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a 136 (619)
+.++...+..|...|..-..+|+...|.+.+.+++.+.|.....
T Consensus 87 ~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 87 RANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 99999999999999999999999999999999999999986543
No 276
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.44 E-value=0.0052 Score=66.46 Aligned_cols=155 Identities=6% Similarity=-0.063 Sum_probs=113.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH----------------------------------------H
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGV----------------------------------------I 41 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~----------------------------------------~ 41 (619)
+..+..+...|+.++|...|++|+.. |.+...+...+. .
T Consensus 217 ~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~ 295 (493)
T 2uy1_A 217 FFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNY 295 (493)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHH
Confidence 45667778889999999999999999 987554443333 2
Q ss_pred HHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 007075 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG-KMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120 (619)
Q Consensus 42 ~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g-~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~ 120 (619)
..+.++.+.|...|++| +..+.....+...+.+....+ +.+.|...|+++++..|+.+..+...+......|+.+.|.
T Consensus 296 ~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR 374 (493)
T 2uy1_A 296 VLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENAR 374 (493)
T ss_dssp HHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 23456789999999999 443345667777777766666 6999999999999999999998888899899999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 007075 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGK 164 (619)
Q Consensus 121 ~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~ 164 (619)
..|+++. .....+.. ....-...|+.+.+...+++..+
T Consensus 375 ~l~er~~----k~~~lw~~--~~~fE~~~G~~~~~r~v~~~~~~ 412 (493)
T 2uy1_A 375 ALFKRLE----KTSRMWDS--MIEYEFMVGSMELFRELVDQKMD 412 (493)
T ss_dssp HHHHHSC----CBHHHHHH--HHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHH----HHHHHHHH--HHHHHHHCCCHHHHHHHHHHHHH
Confidence 9999982 33333333 22222345776665555554433
No 277
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=97.42 E-value=0.0019 Score=69.59 Aligned_cols=143 Identities=17% Similarity=0.095 Sum_probs=90.1
Q ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHHHHCCCceEEEeccCCC------------C---HHHHHHHHHHHHHcCCCCCc-
Q 007075 355 NGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFC------------C---DSVRHRFLSTLEQLGLESLR- 418 (619)
Q Consensus 355 ~~~~~f~~~~~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~------------~---~~~~~~l~~~~~~~Gi~~~r- 418 (619)
++.++|.|||+.....++.+...+..|+..+.-.+|.++.+.. . +.+-+.+.++ +. +|
T Consensus 267 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-----~~-~~g 340 (480)
T 2vch_A 267 LGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLER-----TK-KRG 340 (480)
T ss_dssp TTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHH-----TT-TTE
T ss_pred CCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHH-----hC-CCe
Confidence 4678999999998778888888888888887777777764321 0 0111222222 12 33
Q ss_pred EEEcCCccCcHHHHHhcccCc--EeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhHHHH-HhcCCCcccc-----
Q 007075 419 VDLLPLILLNHDHMQAYSLMD--ISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLL-TKVGLKHLIA----- 490 (619)
Q Consensus 419 v~f~g~~~~~~~~~~~~~~~D--v~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l-~~~gl~~~v~----- 490 (619)
++..+++| +. .++..+| +|+ ..+|.+|++||+++|||+|+++--. -....+..+ ...|..-.+.
T Consensus 341 ~~v~~w~P-q~---~vL~h~~v~~fv---tHgG~~S~~Eal~~GvP~i~~P~~~-DQ~~na~~l~~~~G~g~~l~~~~~~ 412 (480)
T 2vch_A 341 FVIPFWAP-QA---QVLAHPSTGGFL---THCGWNSTLESVVSGIPLIAWPLYA-EQKMNAVLLSEDIRAALRPRAGDDG 412 (480)
T ss_dssp EEEESCCC-HH---HHHHSTTEEEEE---ECCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHTTCCEECCCCCTTS
T ss_pred EEEeCccC-HH---HHhCCCCcCeEE---ecccchhHHHHHHcCCCEEeccccc-cchHHHHHHHHHhCeEEEeecccCC
Confidence 34445876 33 5555566 566 3577889999999999999988521 122334444 5667654442
Q ss_pred -CCHHHHHHHHHHhhc---CHHHHH
Q 007075 491 -KNEDEYVQLALQLAS---DVTALA 511 (619)
Q Consensus 491 -~~~~~y~~~a~~L~~---d~~~~~ 511 (619)
-+.++..+.+.++.. +++.++
T Consensus 413 ~~~~~~l~~av~~vl~~~~~~~~r~ 437 (480)
T 2vch_A 413 LVRREEVARVVKGLMEGEEGKGVRN 437 (480)
T ss_dssp CCCHHHHHHHHHHHHTSTHHHHHHH
T ss_pred ccCHHHHHHHHHHHhcCcchHHHHH
Confidence 356777777778877 444443
No 278
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.38 E-value=0.00071 Score=60.80 Aligned_cols=127 Identities=18% Similarity=0.090 Sum_probs=73.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhC---CCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CCHHHHHHH
Q 007075 5 GVAYGEMLKFDMAIVFYELAFHFN---PHC------AEACNNLGVIYKDRDNLDKAVECYQMALSIKP---NFSQSLNNL 72 (619)
Q Consensus 5 g~~~~~~g~~~~A~~~~~~al~~~---p~~------~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p---~~~~~~~~l 72 (619)
...+...+.|+.|+.....++... |+. ..++..+|..++..++|.+|...|++|+++.. ........+
T Consensus 27 ik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~ 106 (167)
T 3ffl_A 27 VRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPST 106 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 445677788888888888766543 321 34677888888888888888888888876522 111110000
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 007075 73 GVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNY 146 (619)
Q Consensus 73 g~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~ 146 (619)
+. ...+. .... .+.+.+..+.++.||.++|++++|+..++.. -+.......|++++..|
T Consensus 107 ~~----~ss~p-------~s~~-~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I---p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 107 GN----SASTP-------QSQC-LPSEIEVKYKLAECYTVLKQDKDAIAILDGI---PSRQRTPKINMLLANLY 165 (167)
T ss_dssp ---------------------C-CCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS---CGGGCCHHHHHHHHHHC
T ss_pred cc----cCCCc-------cccc-ccchHHHHHHHHHHHHHHCCHHHHHHHHhcC---CchhcCHHHHHHHHHHh
Confidence 00 00000 0011 1334578888999999999999998887643 12223344566666554
No 279
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.24 E-value=0.0016 Score=58.52 Aligned_cols=115 Identities=12% Similarity=0.009 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---CCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CCH
Q 007075 33 EACNNLGVIYKDRDNLDKAVECYQMALSIK---PNF------SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANP---TYA 100 (619)
Q Consensus 33 ~a~~~la~~~~~~g~~~~A~~~~~~al~l~---p~~------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p---~~~ 100 (619)
.+++.-...+...+.|+.|+-....++.+. |+. .+++..+|.+++..++|..|...|+++++... ...
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 455666667778889999998888877663 331 23778889999999999999999999877632 222
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 007075 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRD 161 (619)
Q Consensus 101 ~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~ 161 (619)
.....++. ... +.....+ +. ++...+.++.+|+..++.++|+..++.
T Consensus 101 s~~~~~~~----~ss-------~p~s~~~-~~--e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 101 KVRPSTGN----SAS-------TPQSQCL-PS--EIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ---------------------------CC-CC--HHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred Cccccccc----cCC-------Ccccccc-cc--hHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 21111110 000 0001111 22 334445589999999999999988764
No 280
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.10 E-value=0.014 Score=50.87 Aligned_cols=77 Identities=12% Similarity=0.075 Sum_probs=66.7
Q ss_pred CCCHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 007075 63 PNFSQSLNNLGVVYTVQGKM---DAAAEMIEKAIAANPT-YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQ 138 (619)
Q Consensus 63 p~~~~~~~~lg~~~~~~g~~---~eA~~~~~~al~~~p~-~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~ 138 (619)
.-..++.+++|.++....+. .+++..++..++..|. .-++++.||..++++|+|++|..+.+.+|+.+|++..+..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 45778899999999887764 5789999999998884 5689999999999999999999999999999999987654
Q ss_pred H
Q 007075 139 N 139 (619)
Q Consensus 139 ~ 139 (619)
-
T Consensus 116 L 116 (144)
T 1y8m_A 116 L 116 (144)
T ss_dssp H
T ss_pred H
Confidence 3
No 281
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.04 E-value=0.0075 Score=51.97 Aligned_cols=75 Identities=12% Similarity=0.078 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 007075 65 FSQSLNNLGVVYTVQGKM---DAAAEMIEKAIAANPT-YAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN 139 (619)
Q Consensus 65 ~~~~~~~lg~~~~~~g~~---~eA~~~~~~al~~~p~-~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~ 139 (619)
.+++.+++|.++....+. .+++..++..++.+|. .-++++.||..+.++|+|++|..+.+.++++.|++..+..-
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 567888888888887654 5789999999988884 57889999999999999999999999999999999877554
No 282
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.83 E-value=0.03 Score=48.88 Aligned_cols=80 Identities=8% Similarity=-0.024 Sum_probs=69.6
Q ss_pred CCcHHHHHHHHHHHHHcCCH---HHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 007075 29 PHCAEACNNLGVIYKDRDNL---DKAVECYQMALSIKP-NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYN 104 (619)
Q Consensus 29 p~~~~a~~~la~~~~~~g~~---~~A~~~~~~al~l~p-~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~ 104 (619)
.-...+.+++|.++....+. .+++.+++..+...| ..-+.++.||..+++.|+|++|..+.+..++..|++..+..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 55788999999999988764 479999999999888 46679999999999999999999999999999999988765
Q ss_pred HHHH
Q 007075 105 NLGV 108 (619)
Q Consensus 105 ~Lg~ 108 (619)
....
T Consensus 116 Lk~~ 119 (144)
T 1y8m_A 116 LKSM 119 (144)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 283
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.82 E-value=0.04 Score=59.57 Aligned_cols=120 Identities=8% Similarity=0.021 Sum_probs=99.9
Q ss_pred CHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 007075 13 KFDMAIVFYELAFHFN-PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK-PNFSQSLNNLGVVYTVQGKMDAAAEMIE 90 (619)
Q Consensus 13 ~~~~A~~~~~~al~~~-p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg~~~~~~g~~~eA~~~~~ 90 (619)
+.++|.+.|++..... .-+...|..+...|...|++++|.+++++..+.. .-+...+..+-..|.+.|+.++|.+.++
T Consensus 85 ~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~ 164 (501)
T 4g26_A 85 GLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDA 164 (501)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHH
Confidence 4788999999887653 2257789999999999999999999999988752 3356778888889999999999999999
Q ss_pred HHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCC
Q 007075 91 KAIAANP-TYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI--DPD 132 (619)
Q Consensus 91 ~al~~~p-~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~--~P~ 132 (619)
+..+..- -+...|..|-.+|.+.|+.++|.+.+++.-+. .|+
T Consensus 165 ~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 165 HMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBC
T ss_pred HHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcC
Confidence 9887642 24678999999999999999999999998764 454
No 284
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.70 E-value=0.012 Score=60.05 Aligned_cols=99 Identities=10% Similarity=0.001 Sum_probs=59.1
Q ss_pred CcCCH--HHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcC--CCCCcEEEcCCccCcHHHHHhcccCcEee
Q 007075 367 AKITP--KVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLG--LESLRVDLLPLILLNHDHMQAYSLMDISL 442 (619)
Q Consensus 367 ~K~~~--~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~G--i~~~rv~f~g~~~~~~~~~~~~~~~Dv~L 442 (619)
.|.-| .+.++...+.+ . +.++++.|.+ ..++...+..+..+ ....-+.+.|..+ -.+..++++.||+++
T Consensus 194 ~k~wp~~~~~~l~~~L~~-~-~~~vvl~g~~----~e~~~~~~i~~~~~~~~~~~~~~l~g~~s-l~e~~ali~~a~l~I 266 (348)
T 1psw_A 194 AKRWPHYHYAELAKQLID-E-GYQVVLFGSA----KDHEAGNEILAALNTEQQAWCRNLAGETQ-LDQAVILIAACKAIV 266 (348)
T ss_dssp GGSCCHHHHHHHHHHHHH-T-TCEEEECCCG----GGHHHHHHHHTTSCHHHHTTEEECTTTSC-HHHHHHHHHTSSEEE
T ss_pred cCCCCHHHHHHHHHHHHH-C-CCeEEEEeCh----hhHHHHHHHHHhhhhccccceEeccCcCC-HHHHHHHHHhCCEEE
Confidence 46555 44444444433 3 7888888755 22222222222211 0112346778765 589999999999998
Q ss_pred cCCCCCCchhHHHhhhcCCcEEeccCCccccchh
Q 007075 443 DTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVG 476 (619)
Q Consensus 443 dt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~ 476 (619)
-.- .|+.-+ |.++|+|+|++-|.+...+.+
T Consensus 267 ~~D---sg~~Hl-Aaa~g~P~v~lfg~t~~~~~~ 296 (348)
T 1psw_A 267 TND---SGLMHV-AAALNRPLVALYGPSSPDFTP 296 (348)
T ss_dssp EES---SHHHHH-HHHTTCCEEEEESSSCTTSSC
T ss_pred ecC---CHHHHH-HHHcCCCEEEEECCCCccccC
Confidence 422 344444 889999999998876555543
No 285
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.50 E-value=0.024 Score=48.80 Aligned_cols=79 Identities=8% Similarity=-0.011 Sum_probs=68.7
Q ss_pred cHHHHHHHHHHHHHcCCH---HHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 007075 31 CAEACNNLGVIYKDRDNL---DKAVECYQMALSIKPN-FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNL 106 (619)
Q Consensus 31 ~~~a~~~la~~~~~~g~~---~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~L 106 (619)
.+.+.+++|.++....+. .+++.+++..++.+|. ..+.++.||..+++.|+|++|..+.+.+++..|++..+....
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 578999999999988764 4799999999998884 578999999999999999999999999999999998876655
Q ss_pred HHH
Q 007075 107 GVL 109 (619)
Q Consensus 107 g~~ 109 (619)
..+
T Consensus 119 ~~I 121 (134)
T 3o48_A 119 SMV 121 (134)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 286
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.47 E-value=0.032 Score=49.08 Aligned_cols=97 Identities=18% Similarity=0.124 Sum_probs=80.9
Q ss_pred HHHHHHcCCH------HHHHHHHHHHHHhCCCc--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q 007075 5 GVAYGEMLKF------DMAIVFYELAFHFNPHC--------AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLN 70 (619)
Q Consensus 5 g~~~~~~g~~------~~A~~~~~~al~~~p~~--------~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~ 70 (619)
.....+.|+. ++-.+.|++|+..-|-. ...|...|.. ...++.++|.+.|+.+++++..++..|.
T Consensus 20 l~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi 98 (161)
T 4h7y_A 20 LLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHI 98 (161)
T ss_dssp HHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHH
T ss_pred HHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3444555877 88889999999876542 4456667754 5679999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 007075 71 NLGVVYTVQGKMDAAAEMIEKAIAANPTYAEA 102 (619)
Q Consensus 71 ~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a 102 (619)
..|..-.++|+...|.+.+.+|+.+.|...+.
T Consensus 99 ~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 99 SFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 99999999999999999999999999986553
No 287
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.28 E-value=0.025 Score=63.61 Aligned_cols=115 Identities=13% Similarity=0.035 Sum_probs=83.7
Q ss_pred cCC-HHHHHHHHHHHHHhCCCcHHHHHHHHHHHH--H-cCCHHHHHHHHHHHHhh--------CCCCH----------HH
Q 007075 11 MLK-FDMAIVFYELAFHFNPHCAEACNNLGVIYK--D-RDNLDKAVECYQMALSI--------KPNFS----------QS 68 (619)
Q Consensus 11 ~g~-~~~A~~~~~~al~~~p~~~~a~~~la~~~~--~-~g~~~~A~~~~~~al~l--------~p~~~----------~~ 68 (619)
.++ ++.|+.++++....+|.....+ ..+.+.. . ..+--+|+....++++. .+.+. ..
T Consensus 261 t~~~~~~a~~~le~L~~~~p~~~~~~-~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~L 339 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKKDPIHDIYY-KTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDL 339 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHCGGGHHHH-HHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhCCchhHHH-HHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHH
Confidence 344 5789999999999998764332 2222221 1 23445677777777642 23332 24
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007075 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQC 126 (619)
Q Consensus 69 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~a 126 (619)
+..-+..+..+|+++-|+++.++|+...|.....|+.|+.+|..+|+++.|+-.+..+
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4445677778999999999999999999999999999999999999999998766544
No 288
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=95.24 E-value=0.43 Score=43.36 Aligned_cols=102 Identities=16% Similarity=0.073 Sum_probs=71.8
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 007075 7 AYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAA 86 (619)
Q Consensus 7 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~ 86 (619)
...+.|+++.|.+..++. ++...|..||......|+++-|+.+|+++-. +..+..+|...|+.+.-.
T Consensus 14 LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D--------~~~L~~Ly~~tg~~e~L~ 80 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHS--------FDKLSFLYLVTGDVNKLS 80 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC--------HHHHHHHHHHHTCHHHHH
T ss_pred HHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC--------HHHHHHHHHHhCCHHHHH
Confidence 345788899988887664 5677899999999999999999999887654 233455566677776655
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007075 87 EMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQC 126 (619)
Q Consensus 87 ~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~a 126 (619)
+..+.+..... ++....++..+|+++++++.|.+.
T Consensus 81 kla~iA~~~g~-----~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 81 KMQNIAQTRED-----FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHTTC-----HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHCcc-----HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 55555443332 222345677889999999888655
No 289
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.20 E-value=0.37 Score=46.75 Aligned_cols=59 Identities=12% Similarity=0.081 Sum_probs=35.8
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 007075 8 YGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS 66 (619)
Q Consensus 8 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~ 66 (619)
+.+.|+.++|++..+..++.+|.++.....|-.+++-.|++++|.+.++.+.+++|...
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 34455666666666666666666666666666666666666666666666666666544
No 290
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=95.14 E-value=0.05 Score=53.94 Aligned_cols=210 Identities=8% Similarity=0.005 Sum_probs=103.9
Q ss_pred EcccCCHHHHHHHhHhCCccEEEeCCCCCCCCcchhhccCC-cceeEecccCCCCCCCCCccEEEecCCCCCCCccCCCc
Q 007075 247 DIYGIDEKKVAAMVREDKIDILVELTGHTANNKLGMMACQP-APVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHV 325 (619)
Q Consensus 247 ~~~~~~~~~~~~~i~~d~~Dilvdl~g~t~~~r~~~~a~r~-Apvq~~~~G~p~ttg~~~~Dy~i~d~~~~p~~~~~~~~ 325 (619)
.+..-+..++.+.|++.++|++|--...+...-.. ..|. +...+..+--.+. . -..|++|--.+.. ....|.
T Consensus 52 ~l~~~d~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~--~lk~~~~~~i~~iDD~~~-~-~~~Dllin~~~~~---~~~~Y~ 124 (282)
T 3hbm_A 52 ELSSESIYELINLIKEEKFELLIIDHYGISVDDEK--LIKLETGVKILSFDDEIK-P-HHCDILLNVNAYA---KASDYE 124 (282)
T ss_dssp ECSSSCHHHHHHHHHHHTCSEEEEECTTCCHHHHH--HHHHHHCCEEEEECSSCC-C-CCCSEEEECSTTC---CGGGGT
T ss_pred EcCccCHHHHHHHHHhCCCCEEEEECCCCCHHHHH--HHHHhcCcEEEEEecCCC-c-ccCCEEEeCCccc---chhhcc
Confidence 33334567788888888899888544444432222 2232 1334444443221 1 2367776532211 122332
Q ss_pred cc-----eEEcCCCccccCCCCCC-CCCCCCCCCCCCCeEEEecCCCC--cCCHHHHHHHHHHHHHCCCceEEEeccCCC
Q 007075 326 EE-----LIRLPECFLCYTPSPEA-GPVCPTPALTNGFITFGSFNNLA--KITPKVLQVWARILCAVPNSRLVVKCKPFC 397 (619)
Q Consensus 326 E~-----l~~lp~~~~~~~p~~~~-~~~~~~~~l~~~~~~f~~~~~~~--K~~~~~~~~~~~il~~~P~a~l~l~g~~~~ 397 (619)
+. .+.+ + ..|.|-... ....+. ..++..-++.++|-.. .++..+++ .|...++ ..++.|.+.
T Consensus 125 ~~~p~~~~~l~-G--~~Y~~lR~eF~~~~~~-~r~~~~~ILv~~GG~d~~~l~~~vl~----~L~~~~~-i~vv~G~~~- 194 (282)
T 3hbm_A 125 GLVPFKCEVRC-G--FSYALIREEFYQEAKE-NRKKKYDFFICMGGTDIKNLSLQIAS----ELPKTKI-ISIATSSSN- 194 (282)
T ss_dssp TTCC-CCEEEE-S--GGGCCCCHHHHHHTTC-CCCCCEEEEEECCSCCTTCHHHHHHH----HSCTTSC-EEEEECTTC-
T ss_pred ccCCCCCeEee-C--CcccccCHHHHHhhhh-ccccCCeEEEEECCCchhhHHHHHHH----HhhcCCC-EEEEECCCc-
Confidence 21 1112 1 123332110 000000 0011223444555432 22233333 3333333 444556552
Q ss_pred CHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCCccccchhH
Q 007075 398 CDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGV 477 (619)
Q Consensus 398 ~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~~~ 477 (619)
+..+++++...+. .++.+.+.++ +...+|..||+++. .||+|+.|++++|+|+|..+-... .+..+
T Consensus 195 --~~~~~l~~~~~~~----~~v~v~~~~~---~m~~~m~~aDlvI~----~gG~T~~E~~~~g~P~i~ip~~~~-Q~~nA 260 (282)
T 3hbm_A 195 --PNLKKLQKFAKLH----NNIRLFIDHE---NIAKLMNESNKLII----SASSLVNEALLLKANFKAICYVKN-QESTA 260 (282)
T ss_dssp --TTHHHHHHHHHTC----SSEEEEESCS---CHHHHHHTEEEEEE----ESSHHHHHHHHTTCCEEEECCSGG-GHHHH
T ss_pred --hHHHHHHHHHhhC----CCEEEEeCHH---HHHHHHHHCCEEEE----CCcHHHHHHHHcCCCEEEEeCCCC-HHHHH
Confidence 2456666655442 3688888854 57778888999996 356899999999999887653222 22345
Q ss_pred HHHHhcCCCc
Q 007075 478 SLLTKVGLKH 487 (619)
Q Consensus 478 ~~l~~~gl~~ 487 (619)
..+...|...
T Consensus 261 ~~l~~~G~~~ 270 (282)
T 3hbm_A 261 TWLAKKGYEV 270 (282)
T ss_dssp HHHHHTTCEE
T ss_pred HHHHHCCCEE
Confidence 5566666543
No 291
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.08 E-value=0.21 Score=51.84 Aligned_cols=107 Identities=13% Similarity=0.033 Sum_probs=73.7
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH-HHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 007075 9 GEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKA-VECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAE 87 (619)
Q Consensus 9 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A-~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~ 87 (619)
...|+.++|...+++|+.+.....-. ... ...+-.+ ...++... ..+...++..+...|++++|+.
T Consensus 126 ~~~~~~~~a~~~l~~Al~L~rG~~L~--~~~-----~~~w~~~~r~~l~~~~------~~a~~~~~~~~l~~g~~~~a~~ 192 (388)
T 2ff4_A 126 AAAGRFEQASRHLSAALREWRGPVLD--DLR-----DFQFVEPFATALVEDK------VLAHTAKAEAEIACGRASAVIA 192 (388)
T ss_dssp HHTTCHHHHHHHHHHHHTTCCSSTTG--GGT-----TSTTHHHHHHHHHHHH------HHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHhcCCCCCC--CCC-----chhHHHHHHHHHHHHH------HHHHHHHHHHHHHCCCHHHHHH
Confidence 34577778888888888765332110 000 0111111 11111111 1244567788889999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 88 MIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128 (619)
Q Consensus 88 ~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~ 128 (619)
.+++++..+|-+..+|..+-.+|...|+..+|++.|+++-+
T Consensus 193 ~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 193 ELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998754
No 292
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.05 E-value=1.8 Score=38.68 Aligned_cols=92 Identities=12% Similarity=0.183 Sum_probs=66.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--h---------------CCCCH
Q 007075 4 LGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS--I---------------KPNFS 66 (619)
Q Consensus 4 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~--l---------------~p~~~ 66 (619)
++..++-.|+|..++-.+. .-+...+.+-.+.||..+++|.+|+.+++..++ . +|.+.
T Consensus 39 ~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~Dk 113 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDE 113 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCH
T ss_pred hhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchH
Confidence 4566777777777766543 334566677778888888888888888888883 1 34444
Q ss_pred H-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 007075 67 Q-SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYA 100 (619)
Q Consensus 67 ~-~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~ 100 (619)
+ .+..+|.++.+.|+-+||+.++.......|-.+
T Consensus 114 EfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~ 148 (242)
T 3kae_A 114 EFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFS 148 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccc
Confidence 4 345678888888888888888888887766533
No 293
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.98 E-value=0.26 Score=51.15 Aligned_cols=113 Identities=13% Similarity=-0.002 Sum_probs=77.2
Q ss_pred HHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 007075 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAA-AEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120 (619)
Q Consensus 42 ~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA-~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~ 120 (619)
....|+.++|.+.+++|+.+-....-. .. ....+-.+ ...+++. ...+...++..+...|++++|+
T Consensus 125 ~~~~~~~~~a~~~l~~Al~L~rG~~L~--~~-----~~~~w~~~~r~~l~~~------~~~a~~~~~~~~l~~g~~~~a~ 191 (388)
T 2ff4_A 125 AAAAGRFEQASRHLSAALREWRGPVLD--DL-----RDFQFVEPFATALVED------KVLAHTAKAEAEIACGRASAVI 191 (388)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCCSSTTG--GG-----TTSTTHHHHHHHHHHH------HHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhcCCCCCC--CC-----CchhHHHHHHHHHHHH------HHHHHHHHHHHHHHCCCHHHHH
Confidence 345678888888888888874332100 00 00111111 1112111 1235566788899999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHhh
Q 007075 121 DAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFMRL 169 (619)
Q Consensus 121 ~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~~~~ 169 (619)
..+++++..+|-+..++.. +...+...|+..+|.+.++.+.+.+...
T Consensus 192 ~~l~~~~~~~P~~E~~~~~--lm~al~~~Gr~~~Al~~y~~~r~~L~~e 238 (388)
T 2ff4_A 192 AELEALTFEHPYREPLWTQ--LITAYYLSDRQSDALGAYRRVKTTLADD 238 (388)
T ss_dssp HHHHHHHHHSTTCHHHHHH--HHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHH--HHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887766 5666788999999999999988877654
No 294
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=94.78 E-value=0.37 Score=54.16 Aligned_cols=115 Identities=14% Similarity=0.029 Sum_probs=76.7
Q ss_pred CCCCCeEEEecCCC--CcCCHHH-HHHHHHHH--HHCC-----CceEEEeccCCCCHHHHHHHHHHHHHc--------CC
Q 007075 353 LTNGFITFGSFNNL--AKITPKV-LQVWARIL--CAVP-----NSRLVVKCKPFCCDSVRHRFLSTLEQL--------GL 414 (619)
Q Consensus 353 l~~~~~~f~~~~~~--~K~~~~~-~~~~~~il--~~~P-----~a~l~l~g~~~~~~~~~~~l~~~~~~~--------Gi 414 (619)
+..+.+++|-+-|+ +|...-. +....+++ ...| ...+++.|++.........+.+.+.+. .+
T Consensus 546 vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v 625 (824)
T 2gj4_A 546 INPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVV 625 (824)
T ss_dssp CCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTT
T ss_pred cCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCccc
Confidence 34577888888888 7877664 55555553 2455 468888887754333344444444332 12
Q ss_pred CCC--cEEEcCCccCcHHHHHhcccCcEeecCCC--C-CCchhHHHhhhcCCcEE-eccCC
Q 007075 415 ESL--RVDLLPLILLNHDHMQAYSLMDISLDTFP--Y-AGTTTTCESLYMGVPCV-TMAGS 469 (619)
Q Consensus 415 ~~~--rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~--~-~g~~t~~eAl~~GvPvV-t~~g~ 469 (619)
. + +|+|++.-. ..--..++..|||++-++. + ..||+-+=||..|++.| |+.|-
T Consensus 626 ~-~~lKVvFl~nYd-vslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGa 684 (824)
T 2gj4_A 626 G-DRLRVIFLENYR-VSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGA 684 (824)
T ss_dssp G-GGEEEEEETTCC-HHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTT
T ss_pred C-CceEEEEECCCC-HHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCc
Confidence 3 6 899988743 2333347899999999986 6 77999999999988755 66663
No 295
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=94.76 E-value=0.045 Score=52.20 Aligned_cols=63 Identities=14% Similarity=0.153 Sum_probs=43.2
Q ss_pred cEEEcCCccCcHHHHHhcc-cCcEeecCCCCCCchhHHHhhhcCCcEEeccCCcccc---chhHHHHHhcCCC
Q 007075 418 RVDLLPLILLNHDHMQAYS-LMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAH---NVGVSLLTKVGLK 486 (619)
Q Consensus 418 rv~f~g~~~~~~~~~~~~~-~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~~~~~---r~~~~~l~~~gl~ 486 (619)
++...++++ ++..+|. .||+++. .+|.+|++|++++|+|.|..+...... ...+..+...|..
T Consensus 115 ~v~v~~f~~---~m~~~l~~~AdlvIs---haGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~ 181 (224)
T 2jzc_A 115 KVIGFDFST---KMQSIIRDYSDLVIS---HAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYV 181 (224)
T ss_dssp EEEECCSSS---SHHHHHHHHCSCEEE---SSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCC
T ss_pred eEEEeeccc---hHHHHHHhcCCEEEE---CCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCE
Confidence 566667754 5666777 8999982 378889999999999999877642211 1224556666664
No 296
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.72 E-value=0.14 Score=54.82 Aligned_cols=73 Identities=21% Similarity=0.247 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 007075 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNR 140 (619)
Q Consensus 68 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~ 140 (619)
.+..||.+......+..|..+|.+|..+.|++...++.||.+....|+.-+|+-+|-+++......+.+..|+
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL 226 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNL 226 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHH
Confidence 4455566666666666666666666666666666666666666666666666666666665544455555553
No 297
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.47 E-value=0.43 Score=54.09 Aligned_cols=77 Identities=18% Similarity=0.144 Sum_probs=42.6
Q ss_pred HHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH--------HHhCCCCHHHHHHHHHHHHHc
Q 007075 42 YKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKA--------IAANPTYAEAYNNLGVLYRDA 113 (619)
Q Consensus 42 ~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~a--------l~~~p~~~~a~~~Lg~~~~~~ 113 (619)
....|++++|.++.+ .-++...|.++|..+.+.++++.|+.+|.++ +....++.+.+..++......
T Consensus 662 ~l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~ 736 (814)
T 3mkq_A 662 ALKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETT 736 (814)
T ss_dssp HHHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hhhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHc
Confidence 345677777766542 2345667777777777777777777777664 111233344444444444444
Q ss_pred CCHHHHHHHH
Q 007075 114 GSISLAIDAY 123 (619)
Q Consensus 114 g~~~eA~~~~ 123 (619)
|+++.|...|
T Consensus 737 ~~~~~A~~~~ 746 (814)
T 3mkq_A 737 GKFNLAFNAY 746 (814)
T ss_dssp TCHHHHHHHH
T ss_pred CchHHHHHHH
Confidence 4444444433
No 298
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.47 E-value=0.5 Score=42.21 Aligned_cols=118 Identities=16% Similarity=0.106 Sum_probs=87.1
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 007075 11 MLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIE 90 (619)
Q Consensus 11 ~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~ 90 (619)
-.+|+.++-.-.- +.|..++.-..++..+.-.|+|..|+-.+ .+-+...+.+.-+.||...++|..|+.+++
T Consensus 15 Y~dYdt~~fLsa~---L~~~~~eY~lL~~I~LyyngEY~R~Lf~L-----~~lNT~Ts~YYk~LCy~klKdYkkA~~~le 86 (242)
T 3kae_A 15 YRDYETAIFLAAC---LLPCKPEYRMLMSIVLYLNGEYTRALFHL-----HKLNTCTSKYYESLCYKKKKDYKKAIKSLE 86 (242)
T ss_dssp TTCHHHHHHHHHH---HC----CTHHHHHHHHHHTTCHHHHHHHH-----HTCCBHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccccHHHHHHHH---HccCChHHHhhhhhhhhhcchHhHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566655432221 34555566778899999999999988765 344567788888999999999999999999
Q ss_pred HHHHh-----------------CCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 007075 91 KAIAA-----------------NPTYAE-AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNA 136 (619)
Q Consensus 91 ~al~~-----------------~p~~~~-a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a 136 (619)
+.++- +|.+.+ .+..+|.++...|+.+||+.+|.......|-....
T Consensus 87 ~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 87 SILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp HHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchH
Confidence 99832 344444 45668999999999999999999999988865443
No 299
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.25 E-value=0.17 Score=54.17 Aligned_cols=81 Identities=22% Similarity=0.266 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 007075 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRD 112 (619)
Q Consensus 33 ~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~ 112 (619)
..+..||.+......+..|..+|.+|..+.|++...++.||.+....|+.-+|+-+|-+++......+.+..||...+.+
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999888899999999988876
Q ss_pred c
Q 007075 113 A 113 (619)
Q Consensus 113 ~ 113 (619)
.
T Consensus 233 ~ 233 (497)
T 1ya0_A 233 A 233 (497)
T ss_dssp H
T ss_pred H
Confidence 4
No 300
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.07 E-value=0.84 Score=51.63 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=19.9
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 007075 78 VQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQ 125 (619)
Q Consensus 78 ~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~ 125 (619)
..|++++|.+..+. .++...|..+|..+.+.|+++.|+++|.+
T Consensus 664 ~~~~~~~A~~~~~~-----~~~~~~W~~la~~al~~~~~~~A~~~y~~ 706 (814)
T 3mkq_A 664 KVGQLTLARDLLTD-----ESAEMKWRALGDASLQRFNFKLAIEAFTN 706 (814)
T ss_dssp HHTCHHHHHHHHTT-----CCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHh-----hCcHhHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34455554444321 23344445555555555555555554444
No 301
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=93.94 E-value=0.67 Score=48.00 Aligned_cols=161 Identities=11% Similarity=0.011 Sum_probs=90.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH-----HHHHHHHHH-cCCHHHHHHHHHHHHhhCC----CCHH--HH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEAC-----NNLGVIYKD-RDNLDKAVECYQMALSIKP----NFSQ--SL 69 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~-----~~la~~~~~-~g~~~~A~~~~~~al~l~p----~~~~--~~ 69 (619)
+.||..|.+.|++++-.+++......-+..+.+. .++-..+.. .+..+.-++....+++-.. ..-. .-
T Consensus 23 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr~~l~ 102 (394)
T 3txn_A 23 LQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQSLE 102 (394)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688888888888888777766554433322221 222222221 2333333444444443211 1111 22
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCH--HHHH
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPT------YAEAYNNLGVLYRDAGSISLAIDAYEQCLKID---PDSR--NAGQ 138 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~------~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~---P~~~--~a~~ 138 (619)
..||..|+..|+|.+|.+.+.+.++.-.. ..+.+..-..+|..++++.++..+|.++.... +.++ .+..
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 36788888888888887777777664221 13556666777778888888888887776542 1222 2333
Q ss_pred HHHHHHHHh-hcCCcHHHHHHHHHH
Q 007075 139 NRLLAMNYI-NEGHDDKLFEAHRDW 162 (619)
Q Consensus 139 ~~~la~~~~-~~g~~~~a~~~~~~~ 162 (619)
...-+..++ ..+++.+|...+-+.
T Consensus 183 ~~~~Gi~~l~~~rdyk~A~~~F~ea 207 (394)
T 3txn_A 183 DLQSGILHAADERDFKTAFSYFYEA 207 (394)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHhhHHHHHhccCHHHHHHHHHHH
Confidence 334566677 677777766554443
No 302
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=93.68 E-value=1.5 Score=49.17 Aligned_cols=137 Identities=18% Similarity=0.104 Sum_probs=88.7
Q ss_pred CCCCCeEEEecCCC--CcCCHH-HHHHHHHHHH--HCC-----CceEEEeccCCCCHHHHHHHHHHHHHc--------CC
Q 007075 353 LTNGFITFGSFNNL--AKITPK-VLQVWARILC--AVP-----NSRLVVKCKPFCCDSVRHRFLSTLEQL--------GL 414 (619)
Q Consensus 353 l~~~~~~f~~~~~~--~K~~~~-~~~~~~~il~--~~P-----~a~l~l~g~~~~~~~~~~~l~~~~~~~--------Gi 414 (619)
+..+.+++|-+-|+ +|...- ++....++++ ..| ...+++.|.+.........+.+.+.+. -+
T Consensus 522 vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~ 601 (796)
T 1l5w_A 522 INPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLV 601 (796)
T ss_dssp CCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTT
T ss_pred cCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhcccccc
Confidence 34567888888888 787776 6666655543 233 478888887754434444454444443 24
Q ss_pred CCC--cEEEcCCccCcHHHHHhcccCcEeecCCC--C-CCchhHHHhhhcCCcEE-eccCCccccchhHHHHHhcCC-Cc
Q 007075 415 ESL--RVDLLPLILLNHDHMQAYSLMDISLDTFP--Y-AGTTTTCESLYMGVPCV-TMAGSVHAHNVGVSLLTKVGL-KH 487 (619)
Q Consensus 415 ~~~--rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~--~-~g~~t~~eAl~~GvPvV-t~~g~~~~~r~~~~~l~~~gl-~~ 487 (619)
. + +|+|++.-. ..--..++..|||++-++. + ..||+-+=+|..|++.| |+.|. -..+...+|- +.
T Consensus 602 ~-~~lKVvfl~nY~-vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGa------nvEi~e~vG~~Ng 673 (796)
T 1l5w_A 602 G-DKLKVVFLPDYC-VSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGA------NVEIAEKVGEENI 673 (796)
T ss_dssp G-GGEEEEECSSCC-HHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTT------HHHHHHHHCGGGS
T ss_pred C-CceEEEEECCCC-HHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCe------eeehhhccCCCcE
Confidence 3 7 899988743 2333347899999999986 6 77999999999999988 55564 2233344454 33
Q ss_pred ccc-CCHHHHH
Q 007075 488 LIA-KNEDEYV 497 (619)
Q Consensus 488 ~v~-~~~~~y~ 497 (619)
++- .+.++..
T Consensus 674 F~FG~~~~ev~ 684 (796)
T 1l5w_A 674 FIFGHTVEQVK 684 (796)
T ss_dssp EECSCCHHHHH
T ss_pred EEecCCHHHHH
Confidence 442 4555554
No 303
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=93.62 E-value=0.57 Score=52.44 Aligned_cols=113 Identities=13% Similarity=0.024 Sum_probs=79.7
Q ss_pred CCCCeEEEecCCC--CcCCHH-HHHHHHHHHH--HCC-----CceEEEeccCCCCHHHHHHHHHHHHHc--------CCC
Q 007075 354 TNGFITFGSFNNL--AKITPK-VLQVWARILC--AVP-----NSRLVVKCKPFCCDSVRHRFLSTLEQL--------GLE 415 (619)
Q Consensus 354 ~~~~~~f~~~~~~--~K~~~~-~~~~~~~il~--~~P-----~a~l~l~g~~~~~~~~~~~l~~~~~~~--------Gi~ 415 (619)
..+.+++|-+-|+ +|...- ++....++++ ..| ...+++.|.+.........+.+.+.+. -+.
T Consensus 513 dpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 513 DPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp CTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccC
Confidence 4567889888898 798777 6777666653 444 478888887754434444454444443 344
Q ss_pred CC--cEEEcCCccCcHHHHHhcccCcEeecCCC--C-CCchhHHHhhhcCCcEE-eccC
Q 007075 416 SL--RVDLLPLILLNHDHMQAYSLMDISLDTFP--Y-AGTTTTCESLYMGVPCV-TMAG 468 (619)
Q Consensus 416 ~~--rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~--~-~g~~t~~eAl~~GvPvV-t~~g 468 (619)
+ +|+|++.-. ..--..++..|||++-++. + ..||+-+=+|..|++.| |+.|
T Consensus 593 -~~lKVvFl~nY~-vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDG 649 (796)
T 2c4m_A 593 -PLLKVVFVENYN-VSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDG 649 (796)
T ss_dssp -TTEEEEEETTCC-HHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESST
T ss_pred -CceEEEEECCCC-HHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCC
Confidence 7 899988743 2333347899999999986 6 77999999999999988 5666
No 304
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=93.11 E-value=0.29 Score=49.96 Aligned_cols=97 Identities=12% Similarity=0.055 Sum_probs=59.8
Q ss_pred CcCC-HHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCC
Q 007075 367 AKIT-PKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF 445 (619)
Q Consensus 367 ~K~~-~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~ 445 (619)
.|.- .+.+...++.|.+. +.++++.|.+ ..++..++..+..+ ..-+.+.|... -.+..++++.||+++..
T Consensus 198 ~k~wp~~~~~~l~~~l~~~-g~~vvl~g~~----~e~~~~~~i~~~~~--~~~~~l~g~~s-l~e~~ali~~a~~~i~~- 268 (349)
T 3tov_A 198 EKRWPAERFAHVADYFGRL-GYKTVFFGGP----MDLEMVQPVVEQME--TKPIVATGKFQ-LGPLAAAMNRCNLLITN- 268 (349)
T ss_dssp GGCCCHHHHHHHHHHHHHH-TCEEEECCCT----TTHHHHHHHHHTCS--SCCEECTTCCC-HHHHHHHHHTCSEEEEE-
T ss_pred cCCCCHHHHHHHHHHHHhC-CCeEEEEeCc----chHHHHHHHHHhcc--cccEEeeCCCC-HHHHHHHHHhCCEEEEC-
Confidence 4544 34444444444333 6677777755 22333333333333 23467778766 57899999999999832
Q ss_pred CCCCchhHHHhhhcCCcEEeccCCccccch
Q 007075 446 PYAGTTTTCESLYMGVPCVTMAGSVHAHNV 475 (619)
Q Consensus 446 ~~~g~~t~~eAl~~GvPvVt~~g~~~~~r~ 475 (619)
-.|++-+ |.++|+|+|++-|.+...+.
T Consensus 269 --DsG~~Hl-Aaa~g~P~v~lfg~t~p~~~ 295 (349)
T 3tov_A 269 --DSGPMHV-GISQGVPIVALYGPSNPFFY 295 (349)
T ss_dssp --SSHHHHH-HHTTTCCEEEECSSCCHHHH
T ss_pred --CCCHHHH-HHhcCCCEEEEECCCCcccc
Confidence 2455555 88999999999997655544
No 305
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=91.89 E-value=0.78 Score=51.58 Aligned_cols=112 Identities=14% Similarity=0.123 Sum_probs=81.6
Q ss_pred cCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHH--H-cCCHHHHHHHHHHHHHh--------CCCC----------HHH
Q 007075 45 RDN-LDKAVECYQMALSIKPNFSQSLNNLGVVYT--V-QGKMDAAAEMIEKAIAA--------NPTY----------AEA 102 (619)
Q Consensus 45 ~g~-~~~A~~~~~~al~l~p~~~~~~~~lg~~~~--~-~g~~~eA~~~~~~al~~--------~p~~----------~~a 102 (619)
.++ ++.|++++++..+.+|.....+. .+.+.. . ..+--+|+..+.++++. .+.+ ...
T Consensus 261 t~~~~~~a~~~le~L~~~~p~~~~~~~-~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~L 339 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKKDPIHDIYYK-TAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDL 339 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHCGGGHHHHH-HHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhCCchhHHHH-HHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHH
Confidence 445 68899999999999997654332 222211 1 22345677777777642 2333 224
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHHHH
Q 007075 103 YNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFEAH 159 (619)
Q Consensus 103 ~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~~~ 159 (619)
+..-+..+...|+++-|++..++|+...|.....|+. |+.+|+..|+++.|+-.+
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~--La~vYi~l~d~e~ALLtL 394 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYN--LARCHIKKEEYEKALFAI 394 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHH--HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHH--HHHHHHHhccHHHHHHHH
Confidence 5555778889999999999999999999999999988 899999999999877543
No 306
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.99 E-value=0.37 Score=51.34 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=59.3
Q ss_pred HHHcCCHHHHHHHHHHHHH-----------hCCCcHHHHHHHHHHHHHcCCHHHHH----------HHHHHHHhh-----
Q 007075 8 YGEMLKFDMAIVFYELAFH-----------FNPHCAEACNNLGVIYKDRDNLDKAV----------ECYQMALSI----- 61 (619)
Q Consensus 8 ~~~~g~~~~A~~~~~~al~-----------~~p~~~~a~~~la~~~~~~g~~~~A~----------~~~~~al~l----- 61 (619)
+...+++++|.++-...+. ++.-.+.+|+.++.++...|+..+.. ..+-.+++.
T Consensus 146 L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~ 225 (523)
T 4b4t_S 146 LWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKH 225 (523)
T ss_dssp ---------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCS
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhccc
Confidence 4556788888888766551 13345667888888887777765532 222223322
Q ss_pred CCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 007075 62 KPN-FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY-------AEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDS 133 (619)
Q Consensus 62 ~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~-------~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~ 133 (619)
++. .+..+..+-..|...+.|++|.....++. .|.. ...++.+|.++..+++|.+|.+++..|++..|.+
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 232 23466777888999999999999999984 4432 3457778999999999999999999999988865
Q ss_pred H
Q 007075 134 R 134 (619)
Q Consensus 134 ~ 134 (619)
.
T Consensus 304 ~ 304 (523)
T 4b4t_S 304 S 304 (523)
T ss_dssp S
T ss_pred h
Confidence 3
No 307
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.94 E-value=5.5 Score=36.00 Aligned_cols=81 Identities=19% Similarity=0.171 Sum_probs=57.4
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 007075 30 HCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVL 109 (619)
Q Consensus 30 ~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~ 109 (619)
.+++..+.++. +.|+++.|.+..+.. ++...|..||......|+++-|..+|+++- + +..+-.+
T Consensus 6 ~D~~~rF~LAL---~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~-----D---~~~L~~L 69 (177)
T 3mkq_B 6 QDPHIRFDLAL---EYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH-----S---FDKLSFL 69 (177)
T ss_dssp SCHHHHHHHHH---HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT-----C---HHHHHHH
T ss_pred CChHHHHHHHH---hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC-----C---HHHHHHH
Confidence 34555566554 789999999987655 678899999999999999999999998862 2 2234445
Q ss_pred HHHcCCHHHHHHHHHHH
Q 007075 110 YRDAGSISLAIDAYEQC 126 (619)
Q Consensus 110 ~~~~g~~~eA~~~~~~a 126 (619)
|...|+.++-...-+.+
T Consensus 70 y~~tg~~e~L~kla~iA 86 (177)
T 3mkq_B 70 YLVTGDVNKLSKMQNIA 86 (177)
T ss_dssp HHHHTCHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHH
Confidence 55566665544443333
No 308
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=90.84 E-value=3.2 Score=42.87 Aligned_cols=94 Identities=13% Similarity=0.055 Sum_probs=73.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCHH----H
Q 007075 36 NNLGVIYKDRDNLDKAVECYQMALSIKPN------FSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN---PTYAE----A 102 (619)
Q Consensus 36 ~~la~~~~~~g~~~~A~~~~~~al~l~p~------~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~---p~~~~----a 102 (619)
..+|.+|++.|+|.+|.+.+.+.++.... ..+.+..-..+|...+++.++...|.++.... +.++. .
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 48999999999999999999998874221 12356667888999999999999999987653 23332 3
Q ss_pred HHHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 007075 103 YNNLGVLYR-DAGSISLAIDAYEQCLKI 129 (619)
Q Consensus 103 ~~~Lg~~~~-~~g~~~eA~~~~~~al~~ 129 (619)
...-|..+. ..++|.+|..+|-++++-
T Consensus 183 ~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 183 DLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 445588888 899999999999998754
No 309
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=90.69 E-value=3 Score=49.57 Aligned_cols=116 Identities=16% Similarity=0.021 Sum_probs=78.7
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----------------------C
Q 007075 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI-----------------------K 62 (619)
Q Consensus 6 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l-----------------------~ 62 (619)
..+...+.++-+.+ .+...+.++...+.+|.++...|++++|.++|+++-.- .
T Consensus 820 ~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~ 895 (1139)
T 4fhn_B 820 EKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQ 895 (1139)
T ss_dssp HHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSC
T ss_pred HHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccccccccccc
Confidence 34455566655443 33456777777788999999999999999999887321 0
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-H----HHHHHHHHHHHHcCCHHHHHHHHHH
Q 007075 63 PNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY-A----EAYNNLGVLYRDAGSISLAIDAYEQ 125 (619)
Q Consensus 63 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~-~----~a~~~Lg~~~~~~g~~~eA~~~~~~ 125 (619)
...+..|.....++.+.+.++.+++..+.|++..+.+ . ..|.++=..+...|+|++|...+..
T Consensus 896 ~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 896 NLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp CSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 1122345666677778888888888888888775432 2 2466667777888888888766643
No 310
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=90.19 E-value=5.2 Score=46.28 Aligned_cols=97 Identities=11% Similarity=-0.087 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHH
Q 007075 33 EACNNLGVIYKDRDNLDKAVECYQMALSI----KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN-PTYAEAYNNLG 107 (619)
Q Consensus 33 ~a~~~la~~~~~~g~~~~A~~~~~~al~l----~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~-p~~~~a~~~Lg 107 (619)
..+..+-..|.+.|+.++|.+.+....+. ..-+...|+-|-..|.+.|+.++|.+.|++..+.. .-+...|+.+-
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI 207 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAAL 207 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 35778888899999999999998765432 23456788888888999999999999999887753 22466788888
Q ss_pred HHHHHcCCH-HHHHHHHHHHHHh
Q 007075 108 VLYRDAGSI-SLAIDAYEQCLKI 129 (619)
Q Consensus 108 ~~~~~~g~~-~eA~~~~~~al~~ 129 (619)
.++.+.|+. ++|.+.+++..+.
T Consensus 208 ~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 208 QCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHc
Confidence 888888874 6788888888765
No 311
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=89.52 E-value=9.6 Score=36.83 Aligned_cols=115 Identities=14% Similarity=0.083 Sum_probs=75.4
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 007075 41 IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAI 120 (619)
Q Consensus 41 ~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~ 120 (619)
.+.+.|+.++|++..+..++.+|.+......|-.++.-.|+++.|.+-++-+.+++|+....-..+-.+. .|.
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI-------~aE 78 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLV-------KAA 78 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHH-------HHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHH-------HHH
Confidence 3456788999999999999999999999999999999999999999999999999998654332221111 121
Q ss_pred HHHHHHHHh--C---CCCHHHHHH-HHHHHHHhhcCCcHHHHHHHHHH
Q 007075 121 DAYEQCLKI--D---PDSRNAGQN-RLLAMNYINEGHDDKLFEAHRDW 162 (619)
Q Consensus 121 ~~~~~al~~--~---P~~~~a~~~-~~la~~~~~~g~~~~a~~~~~~~ 162 (619)
..=.+.+.- . +..+..+.. ++-++.....|+.+++.+...+.
T Consensus 79 ~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A 126 (273)
T 1zbp_A 79 QARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQI 126 (273)
T ss_dssp HHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 222222221 1 222333433 33345556678877766655443
No 312
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.52 E-value=1.4 Score=46.31 Aligned_cols=98 Identities=16% Similarity=0.033 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHH----H
Q 007075 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKP---NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN--PTYAE----A 102 (619)
Q Consensus 32 ~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p---~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--p~~~~----a 102 (619)
..++..+|..|.+.|++++|.++|.++..... .-.+.+.....++...+++..+...++++.... ..++. .
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~l 210 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRY 210 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHH
Confidence 44666777777777777777777777766532 223456666666777777777777777765442 12222 2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 103 YNNLGVLYRDAGSISLAIDAYEQCLKI 129 (619)
Q Consensus 103 ~~~Lg~~~~~~g~~~eA~~~~~~al~~ 129 (619)
....|.++...++|.+|...|..++..
T Consensus 211 k~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 211 KTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 333466666677777777777776654
No 313
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.36 E-value=2.8 Score=49.92 Aligned_cols=163 Identities=13% Similarity=0.028 Sum_probs=102.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh---C--------------------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHF---N--------------------PHCAEACNNLGVIYKDRDNLDKAVECYQMA 58 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~---~--------------------p~~~~a~~~la~~~~~~g~~~~A~~~~~~a 58 (619)
|-+|.++...|++++|..+|+++-.- . ...+..|..+..++.+.+.++.+++..+.|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 56899999999999999999887321 0 112345677788899999999999999999
Q ss_pred HhhCC-CCHH----HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH------------HHHH
Q 007075 59 LSIKP-NFSQ----SLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSIS------------LAID 121 (619)
Q Consensus 59 l~l~p-~~~~----~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~------------eA~~ 121 (619)
++..+ ++.. .|.++=..+...|+|++|...+...-.. ...-+++..|-..+.+.|+.+ +-.+
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd~-~~r~~cLr~LV~~lce~~~~~~L~~lpf~gl~~~Vd~ 1004 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLSTT-PLKKSCLLDFVNQLTKQGKINQLLNYSMPTLRQDVDN 1004 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHHS-SSCHHHHHHHHHHHHHHCCHHHHHHHTTTSCHHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHhCCChhhhhCCCCccHHHHHHH
Confidence 98754 3332 5667777788999999998887554322 233556666666555555543 2222
Q ss_pred HHH-HHHHh-CCCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q 007075 122 AYE-QCLKI-DPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRF 166 (619)
Q Consensus 122 ~~~-~al~~-~P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~ 166 (619)
.+. +|-.. ++.+..-++. .|..-++..|++.+|.+..=+.+.++
T Consensus 1005 IL~~kAr~~~~~~~~p~Yy~-iLYs~ri~r~dyR~AA~vmYe~~~RL 1050 (1139)
T 4fhn_B 1005 LLERKAFQMINVESQPCWYN-ILFSWRYKHQNYRDAAAIIYEKLSRY 1050 (1139)
T ss_dssp HHHHHHHHHHHHCCSTHHHH-HHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCccccCCCHHH-HhHhhhhccCChHHHHHHHHHHHHHh
Confidence 222 12111 2222112232 23344556677766665554444444
No 314
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=88.89 E-value=1.6 Score=43.59 Aligned_cols=79 Identities=13% Similarity=0.170 Sum_probs=49.2
Q ss_pred CCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEE
Q 007075 385 PNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464 (619)
Q Consensus 385 P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvV 464 (619)
.+.++++.+++ +..++..++ +.+ +.. .+.+.|..+ -.+..++++.||+++.. -.|++-+ |.++|+|+|
T Consensus 209 ~~~~vvl~~g~---~~e~~~~~~-i~~-~~~--~~~l~g~~s-l~el~ali~~a~l~I~~---DSG~~Hl-Aaa~g~P~v 276 (326)
T 2gt1_A 209 SGIRIKLPWGA---PHEEERAKR-LAE-GFA--YVEVLPKMS-LEGVARVLAGAKFVVSV---DTGLSHL-TAALDRPNI 276 (326)
T ss_dssp TCCEEEECCSS---HHHHHHHHH-HHT-TCT--TEEECCCCC-HHHHHHHHHTCSEEEEE---SSHHHHH-HHHTTCCEE
T ss_pred CCCcEEEecCC---HHHHHHHHH-HHh-hCC--cccccCCCC-HHHHHHHHHhCCEEEec---CCcHHHH-HHHcCCCEE
Confidence 36777776322 122333333 322 122 356778765 58999999999999821 1455555 666999999
Q ss_pred eccCCccccch
Q 007075 465 TMAGSVHAHNV 475 (619)
Q Consensus 465 t~~g~~~~~r~ 475 (619)
++-|.+...+.
T Consensus 277 ~lfg~t~p~~~ 287 (326)
T 2gt1_A 277 TVYGPTDPGLI 287 (326)
T ss_dssp EEESSSCHHHH
T ss_pred EEECCCChhhc
Confidence 99887654444
No 315
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.06 E-value=2.1 Score=44.91 Aligned_cols=96 Identities=13% Similarity=-0.003 Sum_probs=71.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC---CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCCHH----HHHHH
Q 007075 2 YNLGVAYGEMLKFDMAIVFYELAFHFN---PHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK--PNFSQ----SLNNL 72 (619)
Q Consensus 2 ~~lg~~~~~~g~~~~A~~~~~~al~~~---p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~--p~~~~----~~~~l 72 (619)
..+|..|.+.|++++|.++|.++.... ..-.+.+.....++...+++..+..++.++..+. ..+.. .....
T Consensus 135 ~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~ 214 (429)
T 4b4t_R 135 INLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYY 214 (429)
T ss_dssp HHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHH
Confidence 468888999999999999998887642 3346788888888888899999999998887652 22222 33445
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC
Q 007075 73 GVVYTVQGKMDAAAEMIEKAIAANP 97 (619)
Q Consensus 73 g~~~~~~g~~~eA~~~~~~al~~~p 97 (619)
|.++...++|.+|...|-.++....
T Consensus 215 gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 215 GIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhChHHHHHHHHHHHhccCC
Confidence 6777788899999888888766543
No 316
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.35 E-value=8.6 Score=40.35 Aligned_cols=17 Identities=18% Similarity=0.212 Sum_probs=14.3
Q ss_pred HHHHHHhHhCCccEEEe
Q 007075 254 KKVAAMVREDKIDILVE 270 (619)
Q Consensus 254 ~~~~~~i~~d~~Dilvd 270 (619)
..++++|..-.++.-||
T Consensus 378 ~~ls~mI~~g~i~akID 394 (445)
T 4b4t_P 378 TYISDLVNQGIIYAKVN 394 (445)
T ss_dssp HHHHHHHHHTSSCCEEE
T ss_pred HHHHHHHHCCCEEEEEc
Confidence 35889999999988888
No 317
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=86.75 E-value=6 Score=45.74 Aligned_cols=94 Identities=7% Similarity=-0.081 Sum_probs=74.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh----CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHH
Q 007075 3 NLGVAYGEMLKFDMAIVFYELAFHF----NPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIK-PNFSQSLNNLGVVYT 77 (619)
Q Consensus 3 ~lg~~~~~~g~~~~A~~~~~~al~~----~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg~~~~ 77 (619)
.+=..|.+.|+.++|...|++..+. -.-+...|+.|-..|.+.|+.++|.++|++..+.. .-+...|..+-.++.
T Consensus 132 aLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glc 211 (1134)
T 3spa_A 132 AFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMG 211 (1134)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 4556889999999999999765432 23357789999999999999999999999998752 235667777777888
Q ss_pred HcCC-HHHHHHHHHHHHHhC
Q 007075 78 VQGK-MDAAAEMIEKAIAAN 96 (619)
Q Consensus 78 ~~g~-~~eA~~~~~~al~~~ 96 (619)
+.|+ .++|.+++++..+..
T Consensus 212 K~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 212 RQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHTCCHHHHHHHHHHHHHHT
T ss_pred hCCCcHHHHHHHHHHHHHcC
Confidence 8888 578889998887653
No 318
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.75 E-value=9.7 Score=39.96 Aligned_cols=97 Identities=16% Similarity=0.119 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CC-C----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCH---
Q 007075 33 EACNNLGVIYKDRDNLDKAVECYQMALSI-KP-N----FSQSLNNLGVVYTVQGKMDAAAEMIEKAIA---ANPTYA--- 100 (619)
Q Consensus 33 ~a~~~la~~~~~~g~~~~A~~~~~~al~l-~p-~----~~~~~~~lg~~~~~~g~~~eA~~~~~~al~---~~p~~~--- 100 (619)
.....|+.++...|++.+|.+.+.....- .. . -.+.+.....++...+++.+|...++++.. ..+..+
T Consensus 138 rl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk 217 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLK 217 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHH
Confidence 34568999999999999999999887642 11 1 134677778889999999999999998743 233333
Q ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 101 -EAYNNLGVLYRDAGSISLAIDAYEQCLKI 129 (619)
Q Consensus 101 -~a~~~Lg~~~~~~g~~~eA~~~~~~al~~ 129 (619)
..+...|.++...++|.+|..+|..+++.
T Consensus 218 ~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 218 LEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 35667899999999999999999999864
No 319
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.38 E-value=8.1 Score=41.13 Aligned_cols=66 Identities=20% Similarity=0.153 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 007075 32 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNF-------SQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTY 99 (619)
Q Consensus 32 ~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~-------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~ 99 (619)
+..++.+-..|...+.+++|..+..++. .|.. ...++.+|.++..+++|.+|.+++..|++..|..
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 5567778889999999999999999885 3322 3367788999999999999999999999988764
No 320
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=82.14 E-value=8.4 Score=42.28 Aligned_cols=120 Identities=9% Similarity=-0.061 Sum_probs=63.5
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHH-H---HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH
Q 007075 8 YGEMLKFDMAIVFYELAFHFNPHCAE-A---CNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMD 83 (619)
Q Consensus 8 ~~~~g~~~~A~~~~~~al~~~p~~~~-a---~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~ 83 (619)
....++.+.|...+.+......-+.. . ...++.-+...+...++...+.+......++.......+ .....|+++
T Consensus 224 rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r-~Alr~~d~~ 302 (618)
T 1qsa_A 224 SVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVR-MALGTGDRR 302 (618)
T ss_dssp HHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHH-HHHHHTCHH
T ss_pred HHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHH-HHHHCCCHH
Confidence 33444666666666655433222221 1 112222222333244555555555443333332222223 334557777
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 84 AAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128 (619)
Q Consensus 84 eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~ 128 (619)
.|..++++.-..........+-+|.++..+|+.++|...|+++.+
T Consensus 303 ~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 303 GLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 777777665443334566677777777777777777777777764
No 321
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=76.85 E-value=6.2 Score=32.47 Aligned_cols=77 Identities=8% Similarity=0.077 Sum_probs=51.7
Q ss_pred ceEEEe-ccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhh--cCCcE
Q 007075 387 SRLVVK-CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLY--MGVPC 463 (619)
Q Consensus 387 a~l~l~-g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~--~GvPv 463 (619)
-+++++ +.|.+..-+..++++.+.+.|++ -.|.-.+. .++...+..+|+++.|.+...-..-++... .|+||
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~-~~i~~~~~----~~~~~~~~~~D~Ii~t~~l~~~~~~~~~~~~~~~~pv 79 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNIN-ATIEAIAE----TRLSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGIPI 79 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCS-EEEEEECS----TTHHHHTTTCSEEEECSCCSSHHHHHHHHHHHHTCCE
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCC-eEEEEecH----HHHHhhcCCCCEEEECCccHHHHHHHHHHhcccCCCE
Confidence 344444 55655447789999999999997 33544443 344445678999999988766555555543 59999
Q ss_pred EeccC
Q 007075 464 VTMAG 468 (619)
Q Consensus 464 Vt~~g 468 (619)
+...+
T Consensus 80 ~~I~~ 84 (109)
T 2l2q_A 80 EIINT 84 (109)
T ss_dssp EECCH
T ss_pred EEECh
Confidence 87543
No 322
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=76.58 E-value=62 Score=31.96 Aligned_cols=158 Identities=10% Similarity=-0.050 Sum_probs=85.0
Q ss_pred HHcCCHHHHHHHHHHHHHhC---C---CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHHHHHHHHHH
Q 007075 9 GEMLKFDMAIVFYELAFHFN---P---HCAEACNNLGVIYKDRDNLDKAVECYQMALSI-----KPNFSQSLNNLGVVYT 77 (619)
Q Consensus 9 ~~~g~~~~A~~~~~~al~~~---p---~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l-----~p~~~~~~~~lg~~~~ 77 (619)
...|+|=+|...|+...... . +..+.++.-+..+.+.|++.-|.++....++. .+-+.....++..++.
T Consensus 24 I~~G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~ 103 (312)
T 2wpv_A 24 IKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIA 103 (312)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHT
T ss_pred hhccChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 44566666666666554431 1 12334455566666677777666654433332 2334445555665554
Q ss_pred HcCCHH-HHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhC----
Q 007075 78 VQGKMD-AAAEMIEKAIAA-------NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCL---------------KID---- 130 (619)
Q Consensus 78 ~~g~~~-eA~~~~~~al~~-------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al---------------~~~---- 130 (619)
....-+ +=....+++++- .-.+++.|..+|..|.+.|++.+|..+|-..- +..
T Consensus 104 ~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~ 183 (312)
T 2wpv_A 104 ELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIE 183 (312)
T ss_dssp TCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCC
Confidence 422111 112333333332 22578999999999999999999998874210 110
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHH
Q 007075 131 PDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGKRFM 167 (619)
Q Consensus 131 P~~~~a~~~~~la~~~~~~g~~~~a~~~~~~~~~~~~ 167 (619)
|........ -..+.|+..++...|...+..+.+++.
T Consensus 184 ~~e~dlf~~-RaVL~yL~l~n~~~A~~~~~~f~~~~~ 219 (312)
T 2wpv_A 184 DSTVAEFFS-RLVFNYLFISNISFAHESKDIFLERFI 219 (312)
T ss_dssp HHHHHHHHH-HHHHHHHHTTBHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHh
Confidence 111111111 123455666777777777776666653
No 323
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=72.58 E-value=2.1 Score=35.45 Aligned_cols=81 Identities=7% Similarity=-0.016 Sum_probs=52.9
Q ss_pred CceEEEe-ccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhc--CCc
Q 007075 386 NSRLVVK-CKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM--GVP 462 (619)
Q Consensus 386 ~a~l~l~-g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~--GvP 462 (619)
.-+++|+ +.|....-+..++++.+++.|++. .+.=.+. .++.......||+|-......-..-++..+- |+|
T Consensus 6 ~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v-~i~a~~~----~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ip 80 (108)
T 3nbm_A 6 ELKVLVLCAGSGTSAQLANAINEGANLTEVRV-IANSGAY----GAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQ 80 (108)
T ss_dssp CEEEEEEESSSSHHHHHHHHHHHHHHHHTCSE-EEEEEET----TSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCE
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCce-EEEEcch----HHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCc
Confidence 3344444 455555567899999999999972 2211222 2344455778999988777766666666654 999
Q ss_pred EEeccCCcc
Q 007075 463 CVTMAGSVH 471 (619)
Q Consensus 463 vVt~~g~~~ 471 (619)
|...+...+
T Consensus 81 V~vI~~~~Y 89 (108)
T 3nbm_A 81 IVATRGMEY 89 (108)
T ss_dssp EEECCHHHH
T ss_pred EEEeCHHHh
Confidence 998776433
No 324
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=69.98 E-value=45 Score=28.78 Aligned_cols=119 Identities=17% Similarity=0.110 Sum_probs=80.4
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH--H----------------HHHHH--HHcCCHHHHHHHHHHHHhhCCCC
Q 007075 6 VAYGEMLKFDMAIVFYELAFHFNPHCAEACN--N----------------LGVIY--KDRDNLDKAVECYQMALSIKPNF 65 (619)
Q Consensus 6 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~--~----------------la~~~--~~~g~~~~A~~~~~~al~l~p~~ 65 (619)
.-+.-.|..++..+...+...-.+-...-|+ | +|..+ ...|+...-+.+|-+.-. .
T Consensus 15 K~~ildG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~n~---~- 90 (172)
T 1wy6_A 15 KKFLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVINNT---L- 90 (172)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHTTC---C-
T ss_pred HHHHHhhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHhcc---h-
Confidence 3455678889999999888876654322221 1 11111 134566666666654322 1
Q ss_pred HHHHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 66 SQSLNNLG-VVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129 (619)
Q Consensus 66 ~~~~~~lg-~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~ 129 (619)
.+ +..+| ..+..+|+-++-.+.+...+..++-+++.+..+|.+|.+.|+..+|.+.+.+|.+.
T Consensus 91 se-~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 91 NE-HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp CH-HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HH-HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 12 23333 45678899999888888877777778999999999999999999999999999875
No 325
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=68.03 E-value=90 Score=34.04 Aligned_cols=115 Identities=6% Similarity=-0.121 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 007075 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAI 93 (619)
Q Consensus 14 ~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al 93 (619)
..++...+.+......++.......+ .....|+++.|...+++.-..........+-+|.++..+|+.++|..+|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~e~~~r-~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a 346 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQSTSLIERRVR-MALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLM 346 (618)
T ss_dssp CHHHHHHHHHHHHTCCCHHHHHHHHH-HHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCCChHHHHHHHH-HHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 34555555554443333222222222 23345667776666655444333445566666666666677766666666654
Q ss_pred HhC-----------------------CCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 94 AAN-----------------------PTY-----AEAYNNLGVLYRDAGSISLAIDAYEQCLKI 129 (619)
Q Consensus 94 ~~~-----------------------p~~-----~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~ 129 (619)
+.. +.. .......+..+...|...+|...+...++.
T Consensus 347 ~~~~fYg~lAa~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~~ 410 (618)
T 1qsa_A 347 QQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKS 410 (618)
T ss_dssp TSCSHHHHHHHHHTTCCCCCCCCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cCCChHHHHHHHHcCCCCCCCCCCCChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHHhc
Confidence 310 000 011234566778889988888888777654
No 326
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=68.01 E-value=5 Score=32.94 Aligned_cols=72 Identities=10% Similarity=0.021 Sum_probs=47.5
Q ss_pred eEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhc--CCcEE
Q 007075 388 RLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM--GVPCV 464 (619)
Q Consensus 388 ~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~--GvPvV 464 (619)
.|++.|.|....-+..++++.+++.|++ -.|.-.+.- ++......+|++|-+........-++...- ++|||
T Consensus 6 Ill~Cg~G~sTS~l~~k~~~~~~~~gi~-~~i~a~~~~----~~~~~~~~~Dvil~~pqv~~~~~~~~~~~~~~~v~vI 79 (106)
T 1e2b_A 6 IYLFSSAGMSTSLLVSKMRAQAEKYEVP-VIIEAFPET----LAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVI 79 (106)
T ss_dssp EEEECSSSTTTHHHHHHHHHHHHHSCCS-EEEEEECSS----STTHHHHHCSEEEECTTSGGGHHHHHHHSSSSCCCBC
T ss_pred EEEECCCchhHHHHHHHHHHHHHHCCCC-eEEEEecHH----HHHhhccCCCEEEEccchhhhHHHHHHHhcCCCceEE
Confidence 3455567777767788999999999998 344443332 233334668999988777766666666553 45554
No 327
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.94 E-value=39 Score=39.06 Aligned_cols=93 Identities=6% Similarity=-0.061 Sum_probs=54.2
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------------------hCC
Q 007075 39 GVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIA---------------------ANP 97 (619)
Q Consensus 39 a~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~---------------------~~p 97 (619)
...+...+.++-|. ..+...|.++..-+.+|.++...|++++|..+|++|-. ..+
T Consensus 817 ~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~ 892 (950)
T 4gq2_M 817 VEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHH 892 (950)
T ss_dssp HHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTT
T ss_pred HHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccc
Confidence 33344445444332 23344455555555555555555555555555554321 011
Q ss_pred C--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHH
Q 007075 98 T--YAEAYNNLGVLYRDAGSISLAIDAYEQCLKI-DPDSRN 135 (619)
Q Consensus 98 ~--~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-~P~~~~ 135 (619)
+ ....|.....++...+-++-+++..+.|++. .+++..
T Consensus 893 ~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 893 QNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp CSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred cchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCcc
Confidence 1 2346777888999999999999999999975 345544
No 328
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=66.17 E-value=37 Score=38.22 Aligned_cols=112 Identities=12% Similarity=0.022 Sum_probs=72.2
Q ss_pred CCCeEEEecCCC--CcCCHH-HHH---HHHHHHHH-------------CCCceEEEeccCCCCHHHHHHHHHHHHHcC--
Q 007075 355 NGFITFGSFNNL--AKITPK-VLQ---VWARILCA-------------VPNSRLVVKCKPFCCDSVRHRFLSTLEQLG-- 413 (619)
Q Consensus 355 ~~~~~f~~~~~~--~K~~~~-~~~---~~~~il~~-------------~P~a~l~l~g~~~~~~~~~~~l~~~~~~~G-- 413 (619)
.+.++.+-.-|+ +|...- ++. .+.+|+.. .....+++.|+.......-..+.+.+.+.+
T Consensus 598 p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~ 677 (879)
T 1ygp_A 598 DDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADI 677 (879)
T ss_dssp GGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHH
Confidence 355555555566 676554 333 35566655 234677777765544444555555554432
Q ss_pred ------CCCC--cEEEcCCccCcHHHHHhcccCcEeecCC--CC-CCchhHHHhhhcCCcEE-eccC
Q 007075 414 ------LESL--RVDLLPLILLNHDHMQAYSLMDISLDTF--PY-AGTTTTCESLYMGVPCV-TMAG 468 (619)
Q Consensus 414 ------i~~~--rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~--~~-~g~~t~~eAl~~GvPvV-t~~g 468 (619)
+. + +|+|++.-. ..--..++..|||.+..+ |. .+||+-+=+|.-|.+.+ |+.|
T Consensus 678 iN~Dp~v~-~~LKVVFlenY~-VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDG 742 (879)
T 1ygp_A 678 VNNDESIE-HLLKVVFVADYN-VSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDG 742 (879)
T ss_dssp HTTCGGGT-TSEEEEEETTCC-HHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCT
T ss_pred hccChhhC-CceEEEEeCCCC-HHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccc
Confidence 43 5 899998843 233334679999998777 44 77999999999999999 6666
No 329
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=59.53 E-value=31 Score=30.49 Aligned_cols=78 Identities=13% Similarity=0.123 Sum_probs=46.8
Q ss_pred eEEEeccCC---CC-HHHHHHHHHHHHHcCCCCCcEEEcCCccC-------cHHHHHhcccCcEee---cCCC--CCCch
Q 007075 388 RLVVKCKPF---CC-DSVRHRFLSTLEQLGLESLRVDLLPLILL-------NHDHMQAYSLMDISL---DTFP--YAGTT 451 (619)
Q Consensus 388 ~l~l~g~~~---~~-~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~-------~~~~~~~~~~~Dv~L---dt~~--~~g~~ 451 (619)
+.++.|.++ .. -...+++.+.+++.|+. +|.|.-.. ...-+..+..||+++ |||. ..-..
T Consensus 11 ~~~y~a~~~F~~~e~~~~~~~l~~~l~~~G~~----v~~P~~~~~~~~~~i~~~d~~~i~~aD~vVA~ldpf~g~~~D~G 86 (161)
T 2f62_A 11 KIYIAGPAVFNPDMGASYYNKVRELLKKENVM----PLIPTDNEATEALDIRQKNIQMIKDCDAVIADLSPFRGHEPDCG 86 (161)
T ss_dssp EEEEESGGGGSTTTTHHHHHHHHHHHHTTTCE----EECTTTTCCSSHHHHHHHHHHHHHHCSEEEEECCCCSSSSCCHH
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHHHHCCCE----EECCCccCcchHHHHHHHHHHHHHhCCEEEEEecCCCCCCCCCc
Confidence 345555443 23 34567888888888875 45554210 112256788999984 5542 22233
Q ss_pred hHHH---hhhcCCcEEeccCC
Q 007075 452 TTCE---SLYMGVPCVTMAGS 469 (619)
Q Consensus 452 t~~e---Al~~GvPvVt~~g~ 469 (619)
|..| |.+.|+|||.+..+
T Consensus 87 TafEiGyA~AlgKPVi~l~~d 107 (161)
T 2f62_A 87 TAFEVGCAAALNKMVLTFTSD 107 (161)
T ss_dssp HHHHHHHHHHTTCEEEEECSC
T ss_pred HHHHHHHHHHCCCEEEEEEcC
Confidence 5555 77889999987654
No 330
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=57.41 E-value=40 Score=29.07 Aligned_cols=82 Identities=13% Similarity=0.022 Sum_probs=58.1
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHH-HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 007075 11 MLKFDMAIVFYELAFHFNPHCAEACNNLGV-IYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAAEMI 89 (619)
Q Consensus 11 ~g~~~~A~~~~~~al~~~p~~~~a~~~la~-~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~ 89 (619)
.|+...-+.+|-+. +..+. +..+|. .+..+|+-++-.+.+...+.-.+-+++.+..+|.+|.+.|+..+|.+.+
T Consensus 74 C~NlKrVi~C~~~~---n~~se--~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl 148 (172)
T 1wy6_A 74 CQNLKSVVECGVIN---NTLNE--HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLL 148 (172)
T ss_dssp CSCTHHHHHHHHHT---TCCCH--HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhcHHHHHHHHHHh---cchHH--HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHH
Confidence 35566666666442 22222 334443 4567888888888888877777778999999999999999999999999
Q ss_pred HHHHHhCC
Q 007075 90 EKAIAANP 97 (619)
Q Consensus 90 ~~al~~~p 97 (619)
++|.+..-
T Consensus 149 ~~AC~kG~ 156 (172)
T 1wy6_A 149 IEACKKGE 156 (172)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhhh
Confidence 99987643
No 331
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=56.85 E-value=16 Score=30.18 Aligned_cols=64 Identities=6% Similarity=0.023 Sum_probs=41.7
Q ss_pred EEEeccCCCCHH-HHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhc-CCcEEe
Q 007075 389 LVVKCKPFCCDS-VRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM-GVPCVT 465 (619)
Q Consensus 389 l~l~g~~~~~~~-~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~-GvPvVt 465 (619)
|++.|.|.+... +..++++.+.+.|++ -.|.-.+. .++......+|+++.|.+... -. ++||+.
T Consensus 25 lvvC~sG~gTS~ll~~kl~~~~~~~gi~-~~V~~~~~----~~~~~~~~~~DlIist~~l~~--------~~~~ipvi~ 90 (113)
T 1tvm_A 25 IVACGGAVATSTMAAEEIKELCQSHNIP-VELIQCRV----NEIETYMDGVHLICTTARVDR--------SFGDIPLVH 90 (113)
T ss_dssp EEESCSCSSHHHHHHHHHHHHHHHTTCC-EEEEEECT----TTTTTSTTSCSEEEESSCCCC--------CSTTCCEEC
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHcCCe-EEEEEecH----HHHhhccCCCCEEEECCcccc--------ccCCCCEEE
Confidence 444456655444 579999999999997 34444333 223333567999999988761 12 789885
No 332
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=56.57 E-value=19 Score=27.99 Aligned_cols=16 Identities=25% Similarity=0.310 Sum_probs=8.5
Q ss_pred HHcCCHHHHHHHHHHH
Q 007075 77 TVQGKMDAAAEMIEKA 92 (619)
Q Consensus 77 ~~~g~~~eA~~~~~~a 92 (619)
-..|++++|+.+|.++
T Consensus 30 D~~g~y~eAl~lY~~a 45 (83)
T 2w2u_A 30 DKEGNAEEAITNYKKA 45 (83)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHH
Confidence 3455555555555443
No 333
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=54.88 E-value=21 Score=27.72 Aligned_cols=16 Identities=31% Similarity=0.443 Sum_probs=8.3
Q ss_pred HHcCCHHHHHHHHHHH
Q 007075 77 TVQGKMDAAAEMIEKA 92 (619)
Q Consensus 77 ~~~g~~~eA~~~~~~a 92 (619)
-..|+|++|+.+|.++
T Consensus 22 D~~g~y~eAl~lY~~a 37 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKA 37 (83)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHH
Confidence 3455555555555443
No 334
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=54.48 E-value=90 Score=35.83 Aligned_cols=146 Identities=17% Similarity=0.158 Sum_probs=84.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC---C---c----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH--HHHH
Q 007075 3 NLGVAYGEMLKFDMAIVFYELAFHFNP---H---C----AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS--QSLN 70 (619)
Q Consensus 3 ~lg~~~~~~g~~~~A~~~~~~al~~~p---~---~----~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~--~~~~ 70 (619)
.+|.++...+ ++++.++...+..+. . . ..+...||.++...++ +++.+.+...+..+.... .+-+
T Consensus 418 aLGli~ag~~--~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~GS~~-eev~e~L~~~L~dd~~~~~~~Aal 494 (963)
T 4ady_A 418 GLGLIYAGFG--RDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSAN-IEVYEALKEVLYNDSATSGEAAAL 494 (963)
T ss_dssp HHHHHTTTTT--HHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTTCCC-HHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHhcCCCc--HHHHHHHHHHHcCccccccccccHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4555554444 578888887776432 0 1 2456678887776665 456677777776443222 2445
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHhh
Q 007075 71 NLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQN--RLLAMNYIN 148 (619)
Q Consensus 71 ~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~--~~la~~~~~ 148 (619)
.+|.++.-.|+-+-....+..+.+...+...-...+|..+...|+.+.+....+.... . .++..++. +.+++.|..
T Consensus 495 ALGli~vGTgn~~ai~~LL~~~~e~~~e~vrR~aalgLGll~~g~~e~~~~li~~L~~-~-~dp~vRygaa~alglAyaG 572 (963)
T 4ady_A 495 GMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELADDLITKMLA-S-DESLLRYGGAFTIALAYAG 572 (963)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCGGGGHHHHHHHHH-C-SCHHHHHHHHHHHHHHTTT
T ss_pred HHhhhhcccCCHHHHHHHHHHHhccCcHHHHHHHHHHHHhhhCCChHHHHHHHHHHHh-C-CCHHHHHHHHHHHHHHhcC
Confidence 6777777778776655565555554333333334455555577887766655554443 2 23444333 345667777
Q ss_pred cCCcH
Q 007075 149 EGHDD 153 (619)
Q Consensus 149 ~g~~~ 153 (619)
.|+..
T Consensus 573 TGn~~ 577 (963)
T 4ady_A 573 TGNNS 577 (963)
T ss_dssp SCCHH
T ss_pred CCCHH
Confidence 77754
No 335
>2hqs_H Peptidoglycan-associated lipoprotein; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: d.79.7.1 PDB: 2w8b_C 1oap_A
Probab=53.34 E-value=42 Score=27.74 Aligned_cols=74 Identities=9% Similarity=0.053 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHCCCceEEEeccCC--CCHHH--------HHHHHHHHHHcCCCCCcEEEcCCccCc-------HHHHHh
Q 007075 372 KVLQVWARILCAVPNSRLVVKCKPF--CCDSV--------RHRFLSTLEQLGLESLRVDLLPLILLN-------HDHMQA 434 (619)
Q Consensus 372 ~~~~~~~~il~~~P~a~l~l~g~~~--~~~~~--------~~~l~~~~~~~Gi~~~rv~f~g~~~~~-------~~~~~~ 434 (619)
..++.++.+|+..|+..+.|.|-.- +.... ...+.+.+.+.||+++||...|.=... .+-.+.
T Consensus 23 ~~L~~ia~~l~~~p~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~G~~~P~~~n~t~~~r~~ 102 (118)
T 2hqs_H 23 QMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSK 102 (118)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECTTSSCSSCCSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEecCCCcCCCCcCHHHHHh
Confidence 5778888899999999999987331 12111 246777778899999999877652110 122334
Q ss_pred cccCcEeecCC
Q 007075 435 YSLMDISLDTF 445 (619)
Q Consensus 435 ~~~~Dv~Ldt~ 445 (619)
=+.++|.+.|.
T Consensus 103 NRRVei~i~~~ 113 (118)
T 2hqs_H 103 NRRAVLVYLEH 113 (118)
T ss_dssp HSEEEEECC--
T ss_pred CCcEEEEEecC
Confidence 45566666544
No 336
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=52.60 E-value=70 Score=36.94 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=18.2
Q ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007075 26 HFNPHCAEACNNLGVIYKDRDNLDKAVECYQMA 58 (619)
Q Consensus 26 ~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~a 58 (619)
..-|.++..-+.+|.+|...|++++|..+|++|
T Consensus 834 ~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kA 866 (950)
T 4gq2_M 834 GWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTT 866 (950)
T ss_dssp GGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred hhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 344445555555555555555555555555554
No 337
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=52.42 E-value=17 Score=28.34 Aligned_cols=19 Identities=21% Similarity=0.400 Sum_probs=14.3
Q ss_pred HHHcCCHHHHHHHHHHHHh
Q 007075 42 YKDRDNLDKAVECYQMALS 60 (619)
Q Consensus 42 ~~~~g~~~~A~~~~~~al~ 60 (619)
.-..|++++|+.+|..+++
T Consensus 29 ~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 29 ADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHH
Confidence 3467888888888877765
No 338
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=52.40 E-value=1.1e+02 Score=27.49 Aligned_cols=109 Identities=13% Similarity=0.215 Sum_probs=61.8
Q ss_pred ceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcc---------------cCcEee-cCC-CCCC
Q 007075 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS---------------LMDISL-DTF-PYAG 449 (619)
Q Consensus 387 a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~---------------~~Dv~L-dt~-~~~g 449 (619)
.+++|+.+ ++..+..+...+.+.|+. .|..... ..+.+..+. ..||+| |-. |-..
T Consensus 62 ~~ILiVdD---d~~~~~~l~~~L~~~g~~--~v~~a~~---~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~ 133 (206)
T 3mm4_A 62 KRVLVVDD---NFISRKVATGKLKKMGVS--EVEQCDS---GKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMD 133 (206)
T ss_dssp CEEEEECS---CHHHHHHHHHHHHHTTCS--EEEEESS---HHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSC
T ss_pred CEEEEEeC---CHHHHHHHHHHHHHcCCC--eeeeeCC---HHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCC
Confidence 45555542 346777788888887763 4554443 344554442 457664 543 4455
Q ss_pred chhHHHhhh-------cCCcEEeccCCc-cccchhHHHHHhcCCCccccCCHHHHHHHHHHhhc
Q 007075 450 TTTTCESLY-------MGVPCVTMAGSV-HAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLAS 505 (619)
Q Consensus 450 ~~t~~eAl~-------~GvPvVt~~g~~-~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~ 505 (619)
|..+++.+- ..+|||.+.+.. -.. ...-....|..+++....+++.+...++..
T Consensus 134 G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~--~~~~~~~~Ga~~~l~KP~~~L~~~i~~~l~ 195 (206)
T 3mm4_A 134 GYEATREIRKVEKSYGVRTPIIAVSGHDPGSE--EARETIQAGMDAFLDKSLNQLANVIREIES 195 (206)
T ss_dssp HHHHHHHHHHHHHTTTCCCCEEEEESSCCCHH--HHHHHHHHTCSEEEETTCTTHHHHHHHHC-
T ss_pred HHHHHHHHHhhhhhcCCCCcEEEEECCCCcHH--HHHHHHhCCCCEEEcCcHHHHHHHHHHHHh
Confidence 667776664 579999887753 111 111233458888887655555555554443
No 339
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=51.59 E-value=1.9e+02 Score=28.47 Aligned_cols=65 Identities=14% Similarity=0.028 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH----------------H---hCCCCHHHHHHHHH-HHHHcCCHHHHHHHH
Q 007075 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAI----------------A---ANPTYAEAYNNLGV-LYRDAGSISLAIDAY 123 (619)
Q Consensus 64 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al----------------~---~~p~~~~a~~~Lg~-~~~~~g~~~eA~~~~ 123 (619)
.+++.+..+|..|...|++.+|..+|-..- + -.|.....+...+. .|...|+...|...+
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~ 211 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESK 211 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 477889999999999999999988773211 1 11222333433333 456778888888887
Q ss_pred HHHHH
Q 007075 124 EQCLK 128 (619)
Q Consensus 124 ~~al~ 128 (619)
....+
T Consensus 212 ~~f~~ 216 (312)
T 2wpv_A 212 DIFLE 216 (312)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76653
No 340
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=51.59 E-value=17 Score=28.20 Aligned_cols=31 Identities=26% Similarity=0.408 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007075 15 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60 (619)
Q Consensus 15 ~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~ 60 (619)
++|+.+.++|++. -..|++++|+.+|..+++
T Consensus 9 ~~Ai~lv~~Ave~---------------D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 9 DMARKYAILAVKA---------------DKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---------------HHhccHHHHHHHHHHHHH
Confidence 4566666666553 456888888888876665
No 341
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=51.01 E-value=74 Score=25.10 Aligned_cols=13 Identities=8% Similarity=0.153 Sum_probs=5.7
Q ss_pred cCCHHHHHHHHHH
Q 007075 79 QGKMDAAAEMIEK 91 (619)
Q Consensus 79 ~g~~~eA~~~~~~ 91 (619)
.|+|++|+.+|..
T Consensus 28 ~g~y~eAl~~Y~~ 40 (93)
T 1wfd_A 28 ESRYQQALVCYQE 40 (93)
T ss_dssp TTCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHH
Confidence 3444444444433
No 342
>3td3_A Outer membrane protein OMP38; OMPA-like fold, cell-WALL attachment, peptidoglycan-binding, protein,peptide binding protein; 1.59A {Acinetobacter baumannii} PDB: 3td4_A* 3td5_A*
Probab=50.56 E-value=33 Score=28.51 Aligned_cols=53 Identities=13% Similarity=0.103 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHCCCceEEEeccCC--CCHHH--------HHHHHHHHHH-cCCCCCcEEEcCC
Q 007075 372 KVLQVWARILCAVPNSRLVVKCKPF--CCDSV--------RHRFLSTLEQ-LGLESLRVDLLPL 424 (619)
Q Consensus 372 ~~~~~~~~il~~~P~a~l~l~g~~~--~~~~~--------~~~l~~~~~~-~Gi~~~rv~f~g~ 424 (619)
..++.++.+|+..|+.++.|.|..- +.... ...+.+.+.+ .||+++||...|.
T Consensus 31 ~~L~~~a~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~aV~~~L~~~~Gi~~~ri~~~g~ 94 (123)
T 3td3_A 31 PEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGF 94 (123)
T ss_dssp HHHHHHHHHHHHSTTCEEEEEECCCSCSCHHHHHHHHHHHHHHHHHHHHHHSCCCGGGEEEEEC
T ss_pred HHHHHHHHHHHhCCCceEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCHHHEEEEEE
Confidence 5678888889999999999987432 22211 2456677776 7999999988765
No 343
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=49.24 E-value=57 Score=28.49 Aligned_cols=73 Identities=8% Similarity=0.095 Sum_probs=38.2
Q ss_pred HHHhcccCcEeecCC--CCCC-chhHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCcccc---CCHHHHHHHHHHhh
Q 007075 431 HMQAYSLMDISLDTF--PYAG-TTTTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIA---KNEDEYVQLALQLA 504 (619)
Q Consensus 431 ~~~~~~~~Dv~Ldt~--~~~g-~~t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~---~~~~~y~~~a~~L~ 504 (619)
-+..++.||+++--. |..| +.-+-=|.+.|+|||.+.-......+++.+........+.. .+ ++..++..++.
T Consensus 62 d~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~-~el~~il~~f~ 140 (152)
T 4fyk_A 62 NLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE-GEVETMLDRYF 140 (152)
T ss_dssp HHHHHHHCSEEEEECSSCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT-TCHHHHHHHHH
T ss_pred HHHHHHHCCEEEEeCCCCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH-HHHHHHHHHHH
Confidence 355678999986432 2222 22456688899999986543322333433333322222221 33 55555555544
No 344
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=48.10 E-value=71 Score=28.14 Aligned_cols=55 Identities=4% Similarity=-0.002 Sum_probs=30.9
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHH-H--HHHHHHcCCHHHHHHHHHHHHHh
Q 007075 41 IYKDRDNLDKAVECYQMALSIKPNF------SQSLNN-L--GVVYTVQGKMDAAAEMIEKAIAA 95 (619)
Q Consensus 41 ~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~-l--g~~~~~~g~~~eA~~~~~~al~~ 95 (619)
.++..|+|-+|-+.++.+....+.. .+.+.+ + |..+.+.|+...|...+++++..
T Consensus 41 ~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 41 RLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3444566666666666666554433 122333 3 23345567777777777777664
No 345
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=47.76 E-value=2.2e+02 Score=28.25 Aligned_cols=90 Identities=10% Similarity=-0.008 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHHHHHHHHHHHcCC--------HHHHHHHHHHHHHhCCCCH
Q 007075 34 ACNNLGVIYKDRDNLDKAVECYQMALSI-----KPNFSQSLNNLGVVYTVQGK--------MDAAAEMIEKAIAANPTYA 100 (619)
Q Consensus 34 a~~~la~~~~~~g~~~~A~~~~~~al~l-----~p~~~~~~~~lg~~~~~~g~--------~~eA~~~~~~al~~~p~~~ 100 (619)
.++.-+..+.+.|++.-|.++....++. -+-+.....++..++..... ..+|+++-.+.=...-.++
T Consensus 57 LL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp 136 (336)
T 3lpz_A 57 ILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDP 136 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCH
T ss_pred HHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCH
Confidence 3444455555556655555544333321 12223444444444443332 3455555544222234678
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHH
Q 007075 101 EAYNNLGVLYRDAGSISLAIDAY 123 (619)
Q Consensus 101 ~a~~~Lg~~~~~~g~~~eA~~~~ 123 (619)
+.|..+|..|.+.+++.+|..+|
T Consensus 137 ~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 137 ELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHccCCHHHHHHHH
Confidence 99999999999999999998887
No 346
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=47.47 E-value=1e+02 Score=28.17 Aligned_cols=70 Identities=10% Similarity=0.063 Sum_probs=47.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 007075 62 KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAAN--PTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPD 132 (619)
Q Consensus 62 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~ 132 (619)
||.....|..++..+ ..+...++...|.-..... -..+..|...|..+...|++.+|.+.|+.+++.+-.
T Consensus 76 D~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~ 147 (202)
T 3esl_A 76 DPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCR 147 (202)
T ss_dssp CHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 334445666666544 2344667777777666554 455677778888888888888888888888886543
No 347
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=47.21 E-value=26 Score=32.28 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=53.3
Q ss_pred HHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhh
Q 007075 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESL 457 (619)
Q Consensus 378 ~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl 457 (619)
++.+...-...++++|... ..+..+++.+++.|...-.=.|+|..-... ....+..=|+.+-+-|-.-+..+.||-
T Consensus 56 ~~~i~~~~~~~ilfV~tk~---~~~~~V~k~A~~~g~~~v~~rw~gG~lTN~-~~~~~~~Pdllvv~Dp~~d~~ai~EA~ 131 (202)
T 3j20_B 56 GKFLAKFEPQSILAVSVRL---YGQKPVKKFGEVTGARAIPGRFLPGTMTNP-AVKNFFEPDVLIVTDPRADHQAMREAV 131 (202)
T ss_dssp HHHHHHSCSSCEEEECCCT---TTHHHHHHHHHHHSCCCCCSSCCSSSSSCS-SSSSCCCCSEEEESCTTTSHHHHHHHH
T ss_pred HHHHHhhCCCeEEEEecCh---HHHHHHHHHHHHHCCceeCceecCCCcccH-hHHhccCCCeEEEeCCccchHHHHHHH
Confidence 3444444445666676442 223455555666665432223555433222 234456677777666777889999999
Q ss_pred hcCCcEEeccCC
Q 007075 458 YMGVPCVTMAGS 469 (619)
Q Consensus 458 ~~GvPvVt~~g~ 469 (619)
..|+|||++...
T Consensus 132 ~l~IP~Ial~DT 143 (202)
T 3j20_B 132 EIGIPIVALVDT 143 (202)
T ss_dssp HHTCCEEEEECT
T ss_pred HcCCCEEEEEcC
Confidence 999999987653
No 348
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=46.68 E-value=41 Score=35.22 Aligned_cols=87 Identities=10% Similarity=0.030 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHhhCCC--------C----HH----HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--C--------CH
Q 007075 47 NLDKAVECYQMALSIKPN--------F----SQ----SLNNLGVVYTVQGKMDAAAEMIEKAIAANP--T--------YA 100 (619)
Q Consensus 47 ~~~~A~~~~~~al~l~p~--------~----~~----~~~~lg~~~~~~g~~~eA~~~~~~al~~~p--~--------~~ 100 (619)
..+++.....++....-+ + .. ...++-.+|++.++..-+...++..-...+ . ..
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 356677777777765221 1 11 234556889999999988888865544332 1 24
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 007075 101 EAYNNLGVLYRDAGSISLAIDAYEQCLKI-DPDS 133 (619)
Q Consensus 101 ~a~~~Lg~~~~~~g~~~eA~~~~~~al~~-~P~~ 133 (619)
..++.+|..+...++|.+|.+++..|++. .|..
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 56788999999999999999999999998 7765
No 349
>2aiz_P Outer membrane protein P6; alpha-beta sandwich; HET: UDP AMU DGL 6CL DAL; NMR {Haemophilus influenzae} SCOP: d.79.7.1
Probab=46.52 E-value=33 Score=29.17 Aligned_cols=53 Identities=15% Similarity=0.216 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHCCCceEEEeccCC--CCHHH--------HHHHHHHHHHcCCCCCcEEEcCC
Q 007075 372 KVLQVWARILCAVPNSRLVVKCKPF--CCDSV--------RHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 372 ~~~~~~~~il~~~P~a~l~l~g~~~--~~~~~--------~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
..++.++.+|+..|+..+.|.|..- ..... ...+.+.+.+.||+++||...|.
T Consensus 47 ~~L~~ia~~L~~~p~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~ 109 (134)
T 2aiz_P 47 QILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSY 109 (134)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred HHHHHHHHHHHHCCCceEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE
Confidence 4677888889999999999987331 12111 24667777889999999988765
No 350
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=45.43 E-value=33 Score=27.08 Aligned_cols=25 Identities=20% Similarity=0.119 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Q 007075 68 SLNNLGVVYTVQGKMDAAAEMIEKA 92 (619)
Q Consensus 68 ~~~~lg~~~~~~g~~~eA~~~~~~a 92 (619)
.+...+..+...|+|++||++.+++
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 4455667777788888888777664
No 351
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=45.36 E-value=1.2e+02 Score=24.56 Aligned_cols=106 Identities=11% Similarity=0.041 Sum_probs=60.6
Q ss_pred CceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhc--ccCcEeecCCCCCCchhHHHhhhc---C
Q 007075 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY--SLMDISLDTFPYAGTTTTCESLYM---G 460 (619)
Q Consensus 386 ~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~--~~~Dv~Ldt~~~~g~~t~~eAl~~---G 460 (619)
+.+++|+.+ +...+..+...+.+.|.. |..... ..+.+..+ ...|+++ .|-..|..+++.+.. .
T Consensus 18 ~~~ilivdd---~~~~~~~l~~~L~~~g~~---v~~~~~---~~~al~~l~~~~~dlvi--~~~~~g~~~~~~l~~~~~~ 86 (137)
T 2pln_A 18 SMRVLLIEK---NSVLGGEIEKGLNVKGFM---ADVTES---LEDGEYLMDIRNYDLVM--VSDKNALSFVSRIKEKHSS 86 (137)
T ss_dssp CSEEEEECS---CHHHHHHHHHHHHHTTCE---EEEESC---HHHHHHHHHHSCCSEEE--ECSTTHHHHHHHHHHHSTT
T ss_pred CCeEEEEeC---CHHHHHHHHHHHHHcCcE---EEEeCC---HHHHHHHHHcCCCCEEE--EcCccHHHHHHHHHhcCCC
Confidence 345666543 346777888888887763 444333 34444443 3468888 555556666666653 8
Q ss_pred CcEEeccCCccccchhHHHHHhcCCCccccC---CHHHHHHHHHHhh
Q 007075 461 VPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK---NEDEYVQLALQLA 504 (619)
Q Consensus 461 vPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~---~~~~y~~~a~~L~ 504 (619)
+|||.+.+..-.. ...-....|..+++.. +.+++.+.+.++.
T Consensus 87 ~~ii~ls~~~~~~--~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~ 131 (137)
T 2pln_A 87 IVVLVSSDNPTSE--EEVHAFEQGADDYIAKPYRSIKALVARIEARL 131 (137)
T ss_dssp SEEEEEESSCCHH--HHHHHHHTTCSEEEESSCSCHHHHHHHHHHHT
T ss_pred ccEEEEeCCCCHH--HHHHHHHcCCceeeeCCCCCHHHHHHHHHHHH
Confidence 9999877643211 1122334577777753 5566555544443
No 352
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=45.10 E-value=46 Score=25.10 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=27.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q 007075 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLN 70 (619)
Q Consensus 36 ~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~ 70 (619)
..+|..+...|++++|..+|-+|+...|.-.+.+.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~ 55 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQ 55 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 46788888888888888888888888887766543
No 353
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=44.92 E-value=50 Score=24.90 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=27.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAY 103 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~ 103 (619)
..+|..+...|++++|..++-+|+...|+-.+.+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL 54 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLL 54 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 3478888899999999999999999988865543
No 354
>2kgw_A Outer membrane protein A; OMPA-L membrane, transmembrane; NMR {Mycobacterium tuberculosis} PDB: 2lca_A 2lbt_A
Probab=44.23 E-value=36 Score=28.61 Aligned_cols=53 Identities=17% Similarity=0.165 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHCCCceEEEeccCC--CCHH--------HHHHHHHHHHHcCCCCCcEEEcCC
Q 007075 372 KVLQVWARILCAVPNSRLVVKCKPF--CCDS--------VRHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 372 ~~~~~~~~il~~~P~a~l~l~g~~~--~~~~--------~~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
..++.++.+|+..|+..+.|.|..- +... -...+.+.+.+.||+++||...|.
T Consensus 41 ~~L~~ia~~l~~~~~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~ 103 (129)
T 2kgw_A 41 EILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGL 103 (129)
T ss_dssp HHHHHHHHHHHTCTTSCEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred HHHHHHHHHHHhCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE
Confidence 4677788889999999999987432 1111 124566777788999999988765
No 355
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=44.15 E-value=29 Score=31.17 Aligned_cols=65 Identities=12% Similarity=0.072 Sum_probs=41.3
Q ss_pred ccCcEeecCCCCCCch--hHHHhhhcCCcEEeccCCccccchhHHHHHhcCCCc-cccCCHHHHHHHHHHhhc
Q 007075 436 SLMDISLDTFPYAGTT--TTCESLYMGVPCVTMAGSVHAHNVGVSLLTKVGLKH-LIAKNEDEYVQLALQLAS 505 (619)
Q Consensus 436 ~~~Dv~Ldt~~~~g~~--t~~eAl~~GvPvVt~~g~~~~~r~~~~~l~~~gl~~-~v~~~~~~y~~~a~~L~~ 505 (619)
..+|.|+- .|=+.|| ++.||+..|.||+.+.+. .+...++..-.... .+++|+++.++.+.++..
T Consensus 106 ~~sda~Iv-lpGg~GTL~E~~~al~~~kpV~~l~~~----~~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 106 LSSNVLVA-VGMGPGTAAEVALALKAKKPVVLLGTQ----PEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp GGCSEEEE-ESCCHHHHHHHHHHHHTTCCEEEESCC----HHHHHHHHHHCTTTEEEESSHHHHHHHHHHHHH
T ss_pred HhCCEEEE-ecCCccHHHHHHHHHHhCCcEEEEcCc----ccccccCChhhcCeEEEcCCHHHHHHHHHHHHH
Confidence 34565542 2333455 789999999999999882 14445555543433 346888888877766543
No 356
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=44.08 E-value=88 Score=31.38 Aligned_cols=65 Identities=20% Similarity=0.252 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 64 NFSQSLNNLGVVYTVQG--KMDAAAEMIEKAIAA-----NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128 (619)
Q Consensus 64 ~~~~~~~~lg~~~~~~g--~~~eA~~~~~~al~~-----~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~ 128 (619)
..+.++.+||.+-...- ....++..|.+|+.. +..+..-|..+|..+++.+++.||+.++..+-.
T Consensus 253 rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 253 TYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp TCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 34455555555443321 112266666666654 234456677788888999999999988877644
No 357
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=43.21 E-value=43 Score=32.77 Aligned_cols=91 Identities=9% Similarity=-0.006 Sum_probs=53.6
Q ss_pred CCCCeEEEecCCCCcC-CHHHHHHHHHHHHHCCCceEEEeccCC-CCHHHHHHHHHHHHHcCCCCCcEEEcCC----ccC
Q 007075 354 TNGFITFGSFNNLAKI-TPKVLQVWARILCAVPNSRLVVKCKPF-CCDSVRHRFLSTLEQLGLESLRVDLLPL----ILL 427 (619)
Q Consensus 354 ~~~~~~f~~~~~~~K~-~~~~~~~~~~il~~~P~a~l~l~g~~~-~~~~~~~~l~~~~~~~Gi~~~rv~f~g~----~~~ 427 (619)
..|.+ +-.-+...|. ++.+++-+.+... -++.+++++.... ..+...+...+.|+++|+. .|..+.- ...
T Consensus 25 ~~g~l-~iiGGgedk~~~~~i~~~~v~lag-g~~~~I~~IptAs~~~~~~~~~~~~~f~~lG~~--~v~~L~i~~r~~a~ 100 (291)
T 3en0_A 25 SQPAI-LIIGGAEDKVHGREILQTFWSRSG-GNDAIIGIIPSASREPLLIGERYQTIFSDMGVK--ELKVLDIRDRAQGD 100 (291)
T ss_dssp CSCCE-EEECSSCCSSSCCHHHHHHHHHTT-GGGCEEEEECTTCSSHHHHHHHHHHHHHHHCCS--EEEECCCCSGGGGG
T ss_pred CCceE-EEEECCCCccChHHHHHHHHHHcC-CCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCC--eeEEEEecCccccC
Confidence 34554 3344555553 5566666555443 3457777764322 2235667888999999984 2333321 122
Q ss_pred cHHHHHhcccCcEeecCCCCCCchh
Q 007075 428 NHDHMQAYSLMDISLDTFPYAGTTT 452 (619)
Q Consensus 428 ~~~~~~~~~~~Dv~Ldt~~~~g~~t 452 (619)
..+....+..+|++. .+||+|
T Consensus 101 ~~~~~~~l~~ad~I~----v~GGnt 121 (291)
T 3en0_A 101 DSGYRLFVEQCTGIF----MTGGDQ 121 (291)
T ss_dssp CHHHHHHHHHCSEEE----ECCSCH
T ss_pred CHHHHHHHhcCCEEE----ECCCCH
Confidence 357788888999877 566654
No 358
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=43.11 E-value=2e+02 Score=26.32 Aligned_cols=74 Identities=5% Similarity=-0.033 Sum_probs=44.5
Q ss_pred HHHHHHHHh---------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCCcHHHHH
Q 007075 87 EMIEKAIAA---------NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDDKLFE 157 (619)
Q Consensus 87 ~~~~~al~~---------~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~~~~a~~ 157 (619)
..++++++. +|.+...|..++..+ ..++..++.+.|.......-...-+.++...|..+...|++.+|.+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 456666654 233344555555544 2344667777777777766666666666666777777777776666
Q ss_pred HHHH
Q 007075 158 AHRD 161 (619)
Q Consensus 158 ~~~~ 161 (619)
.++.
T Consensus 137 Vy~~ 140 (202)
T 3esl_A 137 LLEL 140 (202)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 359
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=42.65 E-value=40 Score=26.68 Aligned_cols=13 Identities=23% Similarity=0.450 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHh
Q 007075 83 DAAAEMIEKAIAA 95 (619)
Q Consensus 83 ~eA~~~~~~al~~ 95 (619)
+.|+....+|++.
T Consensus 13 ~~Ai~lv~~Ave~ 25 (93)
T 1wfd_A 13 TAAVAVLKRAVEL 25 (93)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3455555555544
No 360
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=41.73 E-value=2.7e+02 Score=27.58 Aligned_cols=86 Identities=12% Similarity=0.156 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 007075 64 NFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLA 143 (619)
Q Consensus 64 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la 143 (619)
.+++.+..+|..|.+.+++.+|..+|- + -..+.++.+.++-.-+...+. |........+ ..
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~i--l-g~~~s~~~~a~mL~ew~~~~~---------------~~e~dlfiaR-aV 194 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHLV--L-GTKESPEVLARMEYEWYKQDE---------------SHTAPLYCAR-AV 194 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHT--T-SCTTHHHHHHHHHHHHHHTSC---------------GGGHHHHHHH-HH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHHH--h-cCCchHHHHHHHHHHHHHhcC---------------CccHHHHHHH-HH
Confidence 566788888999999999999888872 1 111222343333222222221 2222222222 34
Q ss_pred HHHhhcCCcHHHHHHHHHHHHHHHh
Q 007075 144 MNYINEGHDDKLFEAHRDWGKRFMR 168 (619)
Q Consensus 144 ~~~~~~g~~~~a~~~~~~~~~~~~~ 168 (619)
+.|+..++...|...+..+.+.+..
T Consensus 195 L~yL~l~n~~~A~~~~~~f~~~l~~ 219 (336)
T 3lpz_A 195 LPYLLVANVRAANTAYRIFTSALVE 219 (336)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 5677778888887777777766544
No 361
>3oon_A Outer membrane protein (TPN50); protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; 1.79A {Borrelia burgdorferi}
Probab=40.88 E-value=49 Score=27.38 Aligned_cols=54 Identities=7% Similarity=0.065 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHCCCceEEEeccCC--CCHHH--------HHHHHHHHHHcCCC-CCcEEEcCC
Q 007075 371 PKVLQVWARILCAVPNSRLVVKCKPF--CCDSV--------RHRFLSTLEQLGLE-SLRVDLLPL 424 (619)
Q Consensus 371 ~~~~~~~~~il~~~P~a~l~l~g~~~--~~~~~--------~~~l~~~~~~~Gi~-~~rv~f~g~ 424 (619)
...++.++.+|+..|+.++.|.|..- +.... ...+.+.+.+.|+. ++|+...|.
T Consensus 33 ~~~L~~~a~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~aV~~~L~~~Gv~~~~ri~~~g~ 97 (123)
T 3oon_A 33 YKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGW 97 (123)
T ss_dssp HHHHHHHHHHHHHSCSCCEEEEECCCSCCCHHHHHHHHHHHHHHHHHHHHHTTSSCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHHHHHHHcCCCchHeEEEEEE
Confidence 35778888899999999999987432 12211 14667778889999 899988775
No 362
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=40.32 E-value=1.7e+02 Score=30.45 Aligned_cols=86 Identities=12% Similarity=0.026 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHhC-----CC--c------HH---HHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--C--------CHH
Q 007075 14 FDMAIVFYELAFHFN-----PH--C------AE---ACNNLGVIYKDRDNLDKAVECYQMALSIKP--N--------FSQ 67 (619)
Q Consensus 14 ~~~A~~~~~~al~~~-----p~--~------~~---a~~~la~~~~~~g~~~~A~~~~~~al~l~p--~--------~~~ 67 (619)
.+++.....++...- |+ . .. ..+++-.+|++.++..-+...++..-.... . ...
T Consensus 142 le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~ 221 (455)
T 3t5v_B 142 LSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIE 221 (455)
T ss_dssp HHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEe
Confidence 566667777777641 11 1 11 233455788999999998888865433322 1 234
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 007075 68 SLNNLGVVYTVQGKMDAAAEMIEKAIAA-NPTY 99 (619)
Q Consensus 68 ~~~~lg~~~~~~g~~~eA~~~~~~al~~-~p~~ 99 (619)
.++.+|..+...++|.+|.+++..|++. .|..
T Consensus 222 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 222 YRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 6789999999999999999999999998 7754
No 363
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=40.25 E-value=1.5e+02 Score=26.08 Aligned_cols=95 Identities=16% Similarity=0.198 Sum_probs=57.0
Q ss_pred CCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcC-CccCcHHHHHhcccCcEeecCCCC
Q 007075 369 ITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLP-LILLNHDHMQAYSLMDISLDTFPY 447 (619)
Q Consensus 369 ~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g-~~~~~~~~~~~~~~~Dv~Ldt~~~ 447 (619)
+.++.++-.++.+.+.. ++++.|.|. +......+...+...|+. +.+.. ...........+..-|+++--+..
T Consensus 24 l~~~~l~~~~~~i~~a~--~I~i~G~G~-S~~~a~~~~~~l~~~g~~---~~~~~~~~~~~~~~~~~~~~~d~~i~iS~s 97 (187)
T 3sho_A 24 TQPEAIEAAVEAICRAD--HVIVVGMGF-SAAVAVFLGHGLNSLGIR---TTVLTEGGSTLTITLANLRPTDLMIGVSVW 97 (187)
T ss_dssp CCHHHHHHHHHHHHHCS--EEEEECCGG-GHHHHHHHHHHHHHTTCC---EEEECCCTHHHHHHHHTCCTTEEEEEECCS
T ss_pred CCHHHHHHHHHHHHhCC--EEEEEecCc-hHHHHHHHHHHHHhcCCC---EEEecCCchhHHHHHhcCCCCCEEEEEeCC
Confidence 45666777777776653 778888764 345566777778787765 45444 111112234455667887754444
Q ss_pred CCchhHHHh----hhcCCcEEeccCC
Q 007075 448 AGTTTTCES----LYMGVPCVTMAGS 469 (619)
Q Consensus 448 ~g~~t~~eA----l~~GvPvVt~~g~ 469 (619)
+-...++++ -..|+|||++.+.
T Consensus 98 G~t~~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 98 RYLRDTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp SCCHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 444445444 3569999976653
No 364
>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, ME palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=39.19 E-value=53 Score=28.38 Aligned_cols=53 Identities=19% Similarity=0.136 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHCCCceEEEeccCC--CCHHH--------HHHHHHHHHHcCCCCCcEEEcCC
Q 007075 372 KVLQVWARILCAVPNSRLVVKCKPF--CCDSV--------RHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 372 ~~~~~~~~il~~~P~a~l~l~g~~~--~~~~~--------~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
..++.++.+|+..|+..+.|.|-.- +.... ...+.+.+.+.||+++||...|.
T Consensus 51 ~~L~~ia~~L~~~~~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~ 113 (149)
T 2k1s_A 51 NTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGL 113 (149)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred HHHHHHHHHHHhCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE
Confidence 4677778889999999999887432 12111 13566777788999999988765
No 365
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=38.88 E-value=43 Score=27.85 Aligned_cols=15 Identities=13% Similarity=0.341 Sum_probs=8.4
Q ss_pred HHcCCHHHHHHHHHH
Q 007075 77 TVQGKMDAAAEMIEK 91 (619)
Q Consensus 77 ~~~g~~~eA~~~~~~ 91 (619)
-..|+|++|+.+|..
T Consensus 29 D~ag~y~eAl~lY~~ 43 (117)
T 2cpt_A 29 DKAGNYEEALQLYQH 43 (117)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHH
Confidence 344666666666544
No 366
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=38.22 E-value=53 Score=25.35 Aligned_cols=16 Identities=6% Similarity=0.003 Sum_probs=8.4
Q ss_pred HHcCCHHHHHHHHHHH
Q 007075 77 TVQGKMDAAAEMIEKA 92 (619)
Q Consensus 77 ~~~g~~~eA~~~~~~a 92 (619)
-..|++++|+.+|..+
T Consensus 24 D~~g~y~eAl~~Y~~a 39 (85)
T 2v6x_A 24 DTATQYEEAYTAYYNG 39 (85)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHH
Confidence 3445555555555444
No 367
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=38.01 E-value=1.2e+02 Score=31.12 Aligned_cols=64 Identities=16% Similarity=0.169 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 65 FSQSLNNLGVVYTVQGKM--DAAAEMIEKAIAA-----NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128 (619)
Q Consensus 65 ~~~~~~~lg~~~~~~g~~--~eA~~~~~~al~~-----~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~ 128 (619)
.+.++.+||.+-...--. ..++..|.+++.. .-.+..-|..+|-.+++.+++.+|+.++..+-.
T Consensus 276 YPmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 276 YPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CchhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 444555555544322111 1356666666654 234456788899999999999999999887744
No 368
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=37.05 E-value=88 Score=32.39 Aligned_cols=82 Identities=12% Similarity=0.065 Sum_probs=51.2
Q ss_pred HHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcc--cCcEeecCCCCCCc-hhHH
Q 007075 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS--LMDISLDTFPYAGT-TTTC 454 (619)
Q Consensus 378 ~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~--~~Dv~Ldt~~~~g~-~t~~ 454 (619)
.+.+.+.|+..|+-+.+. ++.-.+.+.+.+.+.|+...+ .+.+. ..++-.++. .+|+++-+.|..-+ ..+.
T Consensus 36 ~~~l~~~~~~~lvav~d~--~~~~~~~~a~~~~~~g~~~~~-~~~~~---~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~ 109 (444)
T 2ixa_A 36 VENMARRDDVEIVAFADP--DPYMVGRAQEILKKNGKKPAK-VFGNG---NDDYKNMLKDKNIDAVFVSSPWEWHHEHGV 109 (444)
T ss_dssp HHHHHTCTTEEEEEEECS--CHHHHHHHHHHHHHTTCCCCE-EECSS---TTTHHHHTTCTTCCEEEECCCGGGHHHHHH
T ss_pred HHHHHhCCCcEEEEEEeC--CHHHHHHHHHHHHhcCCCCCc-eeccC---CCCHHHHhcCCCCCEEEEcCCcHHHHHHHH
Confidence 445667899998866543 233334455555567874122 23321 124555554 58988878776554 4788
Q ss_pred HhhhcCCcEEe
Q 007075 455 ESLYMGVPCVT 465 (619)
Q Consensus 455 eAl~~GvPvVt 465 (619)
.||..|++|++
T Consensus 110 ~al~aGkhV~~ 120 (444)
T 2ixa_A 110 AAMKAGKIVGM 120 (444)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHCCCeEEE
Confidence 89999999997
No 369
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=36.95 E-value=26 Score=35.45 Aligned_cols=95 Identities=14% Similarity=0.087 Sum_probs=58.9
Q ss_pred eEEEecC--CCCcCCHHHHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhc
Q 007075 358 ITFGSFN--NLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY 435 (619)
Q Consensus 358 ~~f~~~~--~~~K~~~~~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~ 435 (619)
+.+|.+| +.-+.|-..+.....++...|++.|+-+.+. ..++.++..++.|+. ++ + .+.++.++-
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~-----~~~~a~~~a~~~g~~--~~-y----~d~~ell~~- 92 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA-----NAGLAEARAGEFGFE--KA-T----ADWRALIAD- 92 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC-------TTHHHHHHHHTCS--EE-E----SCHHHHHHC-
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC-----CHHHHHHHHHHhCCC--ee-c----CCHHHHhcC-
Confidence 3344443 4445554555555666777899999877654 224455666778885 22 1 223444432
Q ss_pred ccCcEeecCCCCCC-chhHHHhhhcCCcEEe
Q 007075 436 SLMDISLDTFPYAG-TTTTCESLYMGVPCVT 465 (619)
Q Consensus 436 ~~~Dv~Ldt~~~~g-~~t~~eAl~~GvPvVt 465 (619)
..+|+++-+.|-.. ...+..||..|++|++
T Consensus 93 ~~iDaV~IatP~~~H~~~a~~al~aGkhVl~ 123 (393)
T 4fb5_A 93 PEVDVVSVTTPNQFHAEMAIAALEAGKHVWC 123 (393)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCCcEEEECCChHHHHHHHHHHHhcCCeEEE
Confidence 35788766666544 5589999999999997
No 370
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=36.55 E-value=52 Score=25.62 Aligned_cols=16 Identities=6% Similarity=0.081 Sum_probs=7.9
Q ss_pred HHcCCHHHHHHHHHHH
Q 007075 77 TVQGKMDAAAEMIEKA 92 (619)
Q Consensus 77 ~~~g~~~eA~~~~~~a 92 (619)
-..|+|++|+.+|..+
T Consensus 27 D~~g~y~eAl~lY~~A 42 (86)
T 4a5x_A 27 DSESRYPQALVCYQEG 42 (86)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHH
Confidence 3445555555555443
No 371
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=35.73 E-value=43 Score=30.89 Aligned_cols=93 Identities=16% Similarity=0.220 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchh
Q 007075 373 VLQVWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTT 452 (619)
Q Consensus 373 ~~~~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t 452 (619)
.++.-.+.+...-+..++++|... ..+.-+++.++..|...-.=.|+|..-.... +..+..=|+.+-+-|-.-...
T Consensus 55 ~L~~A~~~i~~i~~~~iLfVgTk~---~~~~~V~~~A~~~g~~~v~~rwlgG~LTN~~-~~~f~~PdlliV~Dp~~e~~a 130 (208)
T 1vi6_A 55 RIRVAAKFLSRYEPSKILLVAARQ---YAHKPVQMFSKVVGSDYIVGRFIPGTLTNPM-LSEYREPEVVFVNDPAIDKQA 130 (208)
T ss_dssp HHHHHHHHHTTSCGGGEEEEECSG---GGHHHHHHHHHHHCCEEEESSCCTTTTTCTT-STTCCCCSEEEESCTTTTHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCH---HHHHHHHHHHHHhCCeeecCEECCCcccChh-hHhhCCCCEEEEECCCcchhH
Confidence 333334445555456666676431 2344555666666654211135555432222 334556677766666777899
Q ss_pred HHHhhhcCCcEEeccCC
Q 007075 453 TCESLYMGVPCVTMAGS 469 (619)
Q Consensus 453 ~~eAl~~GvPvVt~~g~ 469 (619)
+.||-..|+|||++...
T Consensus 131 i~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 131 VSEATAVGIPVVALCDS 147 (208)
T ss_dssp HHHHHHTTCCEEEEECT
T ss_pred HHHHHHhCCCEEEEeCC
Confidence 99999999999987653
No 372
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=35.38 E-value=1.5e+02 Score=26.04 Aligned_cols=60 Identities=10% Similarity=-0.036 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH-H--HHHHHHcCCHHHHHHHHHHHHHh
Q 007075 70 NNLGVVYTVQGKMDAAAEMIEKAIAANPTY------AEAYNN-L--GVLYRDAGSISLAIDAYEQCLKI 129 (619)
Q Consensus 70 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~~------~~a~~~-L--g~~~~~~g~~~eA~~~~~~al~~ 129 (619)
+..+..++..|+|-+|-+.++.+-...+.. ...+.. + |..+...|+..-|...+.+++..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 445677888899999999999998887654 223333 3 34456789999999999999874
No 373
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=34.69 E-value=36 Score=28.31 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007075 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60 (619)
Q Consensus 14 ~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~ 60 (619)
.++|+.+..+|++ .-..|+|++|+.+|..+++
T Consensus 15 l~kAi~lv~~Ave---------------~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 15 LQKAIDLASKAAQ---------------EDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHH---------------HHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---------------HHHccCHHHHHHHHHHHHH
Confidence 3456666666553 3455888888888776554
No 374
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=34.65 E-value=1e+02 Score=30.98 Aligned_cols=66 Identities=20% Similarity=0.106 Sum_probs=46.8
Q ss_pred CcHHHHHHHHHHHHHcCCH--HHHHHHHHHHHhh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 30 HCAEACNNLGVIYKDRDNL--DKAVECYQMALSI-----KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95 (619)
Q Consensus 30 ~~~~a~~~la~~~~~~g~~--~~A~~~~~~al~l-----~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~ 95 (619)
..+.++-+||.+-...--. ..++.+|.+|+.. .-.+...+..+|..+++.+++.+|+..+-++-..
T Consensus 253 rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 253 TYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp TCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHH
Confidence 4566777777665433222 2277888888864 3455667888899999999999999998777543
No 375
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=34.20 E-value=46 Score=25.72 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007075 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALS 60 (619)
Q Consensus 14 ~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~ 60 (619)
.++|+.+..+|++ .-..|++++|+.+|..+++
T Consensus 10 l~~A~~l~~~Av~---------------~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 10 LTKGIELVQKAID---------------LDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHHH---------------HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---------------HHHcCCHHHHHHHHHHHHH
Confidence 3456666666553 3456888888888877765
No 376
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=34.14 E-value=26 Score=33.96 Aligned_cols=36 Identities=17% Similarity=-0.013 Sum_probs=25.3
Q ss_pred HHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEe
Q 007075 430 DHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVT 465 (619)
Q Consensus 430 ~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt 465 (619)
+.-..+..+||.+|-.+- ..-..+..++..|+|||+
T Consensus 66 dl~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVi 102 (272)
T 4f3y_A 66 DIERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVI 102 (272)
T ss_dssp CHHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEE
Confidence 344445579999986643 333456778999999997
No 377
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=33.76 E-value=2e+02 Score=23.71 Aligned_cols=76 Identities=9% Similarity=0.046 Sum_probs=48.8
Q ss_pred ceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhc-----------ccCcEee-cCC-CCCCchhH
Q 007075 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY-----------SLMDISL-DTF-PYAGTTTT 453 (619)
Q Consensus 387 a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~-----------~~~Dv~L-dt~-~~~g~~t~ 453 (619)
.+++|+.+ +...+..+...+.+.|.. .+|..... ..+.+..+ ...|+++ |-. |-..|..+
T Consensus 5 ~~ILivdd---d~~~~~~l~~~L~~~g~~-~~v~~~~~---~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~ 77 (152)
T 3heb_A 5 VTIVMIED---DLGHARLIEKNIRRAGVN-NEIIAFTD---GTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDI 77 (152)
T ss_dssp CEEEEECC---CHHHHHHHHHHHHHTTCC-CCEEEESS---HHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHH
T ss_pred ceEEEEeC---CHHHHHHHHHHHHhCCCc-ceEEEeCC---HHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHH
Confidence 35555542 457888999999999886 45665544 34555554 3467664 544 44556777
Q ss_pred HHhhhc-----CCcEEeccCC
Q 007075 454 CESLYM-----GVPCVTMAGS 469 (619)
Q Consensus 454 ~eAl~~-----GvPvVt~~g~ 469 (619)
++.+-. ++|||.+.+.
T Consensus 78 ~~~lr~~~~~~~~pii~~t~~ 98 (152)
T 3heb_A 78 LKLVKENPHTRRSPVVILTTT 98 (152)
T ss_dssp HHHHHHSTTTTTSCEEEEESC
T ss_pred HHHHHhcccccCCCEEEEecC
Confidence 777654 7899876664
No 378
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=32.94 E-value=1.8e+02 Score=29.69 Aligned_cols=64 Identities=16% Similarity=0.167 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 65 FSQSLNNLGVVYTVQG--KMDAAAEMIEKAIAA-----NPTYAEAYNNLGVLYRDAGSISLAIDAYEQCLK 128 (619)
Q Consensus 65 ~~~~~~~lg~~~~~~g--~~~eA~~~~~~al~~-----~p~~~~a~~~Lg~~~~~~g~~~eA~~~~~~al~ 128 (619)
.+.++.+||.+-...- ....++..|++|+.. .......|..+|-.+...+++.+|+.++.++-.
T Consensus 261 YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 261 YPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 4445555554443211 112356677777664 334466788889999999999999999987743
No 379
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=32.78 E-value=65 Score=25.43 Aligned_cols=29 Identities=14% Similarity=0.162 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007075 32 AEACNNLGVIYKDRDNLDKAVECYQMALS 60 (619)
Q Consensus 32 ~~a~~~la~~~~~~g~~~~A~~~~~~al~ 60 (619)
+..+-..+..+...|+|++|+++.++|..
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 34556677888889999999998877664
No 380
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=32.74 E-value=48 Score=32.30 Aligned_cols=73 Identities=11% Similarity=-0.019 Sum_probs=49.3
Q ss_pred HHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCch-hHHH
Q 007075 377 WARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTT-TTCE 455 (619)
Q Consensus 377 ~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~-t~~e 455 (619)
+.+.+.+.|+..++-+.+. + .++.++..++.|+.. + .+.++.+. .+|+++-+.|...+. .+.+
T Consensus 22 ~~~~l~~~~~~~l~av~d~--~---~~~~~~~a~~~~~~~----~----~~~~~ll~---~~D~V~i~tp~~~h~~~~~~ 85 (308)
T 3uuw_A 22 YLPILTKSERFEFVGAFTP--N---KVKREKICSDYRIMP----F----DSIESLAK---KCDCIFLHSSTETHYEIIKI 85 (308)
T ss_dssp THHHHTSCSSSEEEEEECS--C---HHHHHHHHHHHTCCB----C----SCHHHHHT---TCSEEEECCCGGGHHHHHHH
T ss_pred HHHHHHhCCCeEEEEEECC--C---HHHHHHHHHHcCCCC----c----CCHHHHHh---cCCEEEEeCCcHhHHHHHHH
Confidence 5666778899998855443 1 244555566778751 1 22345444 789998887775554 6788
Q ss_pred hhhcCCcEEe
Q 007075 456 SLYMGVPCVT 465 (619)
Q Consensus 456 Al~~GvPvVt 465 (619)
|+..|++|++
T Consensus 86 al~~gk~vl~ 95 (308)
T 3uuw_A 86 LLNLGVHVYV 95 (308)
T ss_dssp HHHTTCEEEE
T ss_pred HHHCCCcEEE
Confidence 9999999986
No 381
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=32.61 E-value=87 Score=28.66 Aligned_cols=16 Identities=6% Similarity=0.152 Sum_probs=13.0
Q ss_pred HHHHhHhCCccEEEeC
Q 007075 256 VAAMVREDKIDILVEL 271 (619)
Q Consensus 256 ~~~~i~~d~~Dilvdl 271 (619)
++.+|+.-.|+--||-
T Consensus 168 la~lI~~G~Ikg~I~~ 183 (203)
T 3t5x_A 168 LANLIYMGHVKGYISH 183 (203)
T ss_dssp HHHHHHHTSSCEEEET
T ss_pred HHHHHHcCceEEEEcc
Confidence 7888888888887774
No 382
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=32.18 E-value=99 Score=30.60 Aligned_cols=75 Identities=8% Similarity=0.061 Sum_probs=50.7
Q ss_pred HHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCc-hhHHHh
Q 007075 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT-TTTCES 456 (619)
Q Consensus 378 ~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~-~t~~eA 456 (619)
...++..|++.|+-+.+. + .++.++.+++.|+. ++ | .+.++.++- ..+|+++-+.|-..+ ..+.+|
T Consensus 40 ~~~~~~~~~~~lvav~d~--~---~~~a~~~a~~~g~~--~~-y----~d~~ell~~-~~iDaV~I~tP~~~H~~~~~~a 106 (350)
T 4had_A 40 VPAIQDAENCVVTAIASR--D---LTRAREMADRFSVP--HA-F----GSYEEMLAS-DVIDAVYIPLPTSQHIEWSIKA 106 (350)
T ss_dssp HHHHHHCSSEEEEEEECS--S---HHHHHHHHHHHTCS--EE-E----SSHHHHHHC-SSCSEEEECSCGGGHHHHHHHH
T ss_pred HHHHHhCCCeEEEEEECC--C---HHHHHHHHHHcCCC--ee-e----CCHHHHhcC-CCCCEEEEeCCCchhHHHHHHH
Confidence 456778999999876654 1 34556667788885 22 2 123444432 457888767766554 588999
Q ss_pred hhcCCcEEe
Q 007075 457 LYMGVPCVT 465 (619)
Q Consensus 457 l~~GvPvVt 465 (619)
|..|++|++
T Consensus 107 l~aGkhVl~ 115 (350)
T 4had_A 107 ADAGKHVVC 115 (350)
T ss_dssp HHTTCEEEE
T ss_pred HhcCCEEEE
Confidence 999999996
No 383
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=32.08 E-value=88 Score=31.11 Aligned_cols=76 Identities=9% Similarity=-0.032 Sum_probs=49.2
Q ss_pred HHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCc-hhHH
Q 007075 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT-TTTC 454 (619)
Q Consensus 376 ~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~-~t~~ 454 (619)
...+.+.+.|+..++-+.+. + .++.++..++.|+.. + .+.++.+. -..+|+++.+.|-..+ ..+.
T Consensus 19 ~~~~~l~~~~~~~lvav~d~--~---~~~~~~~~~~~g~~~----~----~~~~~~l~-~~~~D~V~i~tp~~~h~~~~~ 84 (354)
T 3db2_A 19 VMADAYTKSEKLKLVTCYSR--T---EDKREKFGKRYNCAG----D----ATMEALLA-REDVEMVIITVPNDKHAEVIE 84 (354)
T ss_dssp HHHHHHTTCSSEEEEEEECS--S---HHHHHHHHHHHTCCC----C----SSHHHHHH-CSSCCEEEECSCTTSHHHHHH
T ss_pred HHHHHHHhCCCcEEEEEECC--C---HHHHHHHHHHcCCCC----c----CCHHHHhc-CCCCCEEEEeCChHHHHHHHH
Confidence 45666778899988865443 1 244455556667751 1 22333332 1468998877777555 4788
Q ss_pred HhhhcCCcEEe
Q 007075 455 ESLYMGVPCVT 465 (619)
Q Consensus 455 eAl~~GvPvVt 465 (619)
.|+..|++|++
T Consensus 85 ~al~~gk~vl~ 95 (354)
T 3db2_A 85 QCARSGKHIYV 95 (354)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCEEEE
Confidence 99999999996
No 384
>3ldt_A Outer membrane protein, OMPA family protein; OMPA-like domain, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Legionella pneumophila}
Probab=31.89 E-value=87 Score=27.68 Aligned_cols=53 Identities=19% Similarity=0.106 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHCCCceEEEeccCC--CCHH-------H-HHHHHHHHHHcCCCCCcEEEcCC
Q 007075 372 KVLQVWARILCAVPNSRLVVKCKPF--CCDS-------V-RHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 372 ~~~~~~~~il~~~P~a~l~l~g~~~--~~~~-------~-~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
..++.++.+|+..|+.++.|.|..- .... . ...+.+.+.+.||+++||...|.
T Consensus 71 ~~L~~la~~l~~~~~~~i~I~GhTD~~G~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~ 133 (169)
T 3ldt_A 71 PGLNNVIRLLNFYPQSTIYVAGFTDNVGSRSHKRKLSQAQAETMMTFLWANGIAAKRLKAEGY 133 (169)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEECTTSCCC--CHHHHHHHHHHHHHHHHHTTCCTTTEEECCT
T ss_pred HHHHHHHHHHHhCCCCeEEEEeEeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE
Confidence 4677788899999999999887321 1111 1 24577888889999999998876
No 385
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=31.59 E-value=77 Score=32.55 Aligned_cols=78 Identities=14% Similarity=0.031 Sum_probs=48.8
Q ss_pred HHHHHHCCCceEEE-eccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhc----ccCcEeecCCCCCCc-h
Q 007075 378 ARILCAVPNSRLVV-KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY----SLMDISLDTFPYAGT-T 451 (619)
Q Consensus 378 ~~il~~~P~a~l~l-~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~----~~~Dv~Ldt~~~~g~-~ 451 (619)
...+...|+..++- +.+. ..++.++..++.|+...++ ..+.++.+..- ..+|+++-+.|...+ .
T Consensus 56 ~~~~~~~~~~~lva~v~d~-----~~~~a~~~a~~~g~~~~~~-----~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~ 125 (417)
T 3v5n_A 56 RIAARLDDHYELVAGALSS-----TPEKAEASGRELGLDPSRV-----YSDFKEMAIREAKLKNGIEAVAIVTPNHVHYA 125 (417)
T ss_dssp HHHHHHTSCEEEEEEECCS-----SHHHHHHHHHHHTCCGGGB-----CSCHHHHHHHHHHCTTCCSEEEECSCTTSHHH
T ss_pred HHHHhhCCCcEEEEEEeCC-----CHHHHHHHHHHcCCCcccc-----cCCHHHHHhcccccCCCCcEEEECCCcHHHHH
Confidence 34456678888773 4332 1345566677788863332 12234444431 238988777776555 4
Q ss_pred hHHHhhhcCCcEEe
Q 007075 452 TTCESLYMGVPCVT 465 (619)
Q Consensus 452 t~~eAl~~GvPvVt 465 (619)
.+..||..|++|++
T Consensus 126 ~~~~al~aGkhVl~ 139 (417)
T 3v5n_A 126 AAKEFLKRGIHVIC 139 (417)
T ss_dssp HHHHHHTTTCEEEE
T ss_pred HHHHHHhCCCeEEE
Confidence 78899999999997
No 386
>3cyp_B Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B* 3imp_B
Probab=31.20 E-value=78 Score=26.84 Aligned_cols=53 Identities=17% Similarity=0.202 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHCC-CceEEEeccCCC--C--H----HH-----H-HHHHHHHHHcCCCCCcEEEcCC
Q 007075 372 KVLQVWARILCAVP-NSRLVVKCKPFC--C--D----SV-----R-HRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 372 ~~~~~~~~il~~~P-~a~l~l~g~~~~--~--~----~~-----~-~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
..++.++.+|+..| +..+.|.|..-. . + .. | ..+.+.+.+.||+++||...|.
T Consensus 21 ~~L~~ia~~l~~~p~~~~i~I~GhtD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~ 88 (138)
T 3cyp_B 21 LYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSY 88 (138)
T ss_dssp HHHHHHHHHHTTSCTTCEEEEEEECCCCCC----CCSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred HHHHHHHHHHHhCCCCcEEEEEEecCCCCcccccchhHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE
Confidence 36677788899999 889999873211 1 1 11 1 4567778888999999988765
No 387
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=30.21 E-value=95 Score=28.38 Aligned_cols=34 Identities=15% Similarity=-0.014 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 007075 33 EACNNLGVIYKDRDNLDKAVECYQMALSIKPNFS 66 (619)
Q Consensus 33 ~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~ 66 (619)
...+.+|.++...++|.+|.+.+..|++..|...
T Consensus 15 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 15 TYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 3566777777777777777777777777766543
No 388
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=30.01 E-value=42 Score=33.45 Aligned_cols=84 Identities=14% Similarity=-0.001 Sum_probs=47.9
Q ss_pred HHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCc--------cCcHHHHHhcccCcEeecCCCC
Q 007075 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLI--------LLNHDHMQAYSLMDISLDTFPY 447 (619)
Q Consensus 376 ~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~--------~~~~~~~~~~~~~Dv~Ldt~~~ 447 (619)
.+.+++.+.|+..++.+.+.. . +.....++..|++ -.-.|.+.+ .-..++..++..+|+++++.|.
T Consensus 16 ~~~r~l~~~~~~elvav~d~~-~----~~~~~~~~~~g~~-~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDvV~~aTp~ 89 (334)
T 2czc_A 16 RVAYAVTKQDDMELIGITKTK-P----DFEAYRAKELGIP-VYAASEEFIPRFEKEGFEVAGTLNDLLEKVDIIVDATPG 89 (334)
T ss_dssp HHHHHHHTCTTEEEEEEEESS-C----SHHHHHHHHTTCC-EEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEEEECCST
T ss_pred HHHHHHhcCCCCEEEEEEcCC-H----HHHHHHHHhcCcc-ccccccccceeccCCceEEcCcHHHhccCCCEEEECCCc
Confidence 345566678999988776431 1 2333445566654 111111110 0011233334589999999887
Q ss_pred CCc-hhHHHhhhcCCcEEe
Q 007075 448 AGT-TTTCESLYMGVPCVT 465 (619)
Q Consensus 448 ~g~-~t~~eAl~~GvPvVt 465 (619)
+-+ ..+..++..|++||.
T Consensus 90 ~~h~~~a~~~l~aGk~Vi~ 108 (334)
T 2czc_A 90 GIGAKNKPLYEKAGVKAIF 108 (334)
T ss_dssp THHHHHHHHHHHHTCEEEE
T ss_pred cccHHHHHHHHHcCCceEe
Confidence 654 456678889999985
No 389
>1hym_A CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1
Probab=29.50 E-value=19 Score=24.43 Aligned_cols=27 Identities=11% Similarity=0.400 Sum_probs=24.0
Q ss_pred CeEEEcccCCHHHHHHHhHhCCccEEE
Q 007075 243 GIWRDIYGIDEKKVAAMVREDKIDILV 269 (619)
Q Consensus 243 ~~~~~~~~~~~~~~~~~i~~d~~Dilv 269 (619)
..|-++-|.+-+++++.|.+|++|+-|
T Consensus 8 ~sWPELVG~~~~~A~~~I~~e~P~v~v 34 (45)
T 1hym_A 8 SSWPHLVGVGGSVAKAIIERQNPNVKA 34 (45)
T ss_dssp SBCCCCTTSCHHHHHHHHHHHCTTCEE
T ss_pred CcChhhcCCcHHHHHHHHHHHCCCCeE
Confidence 469999999999999999999998754
No 390
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=29.48 E-value=1.8e+02 Score=32.19 Aligned_cols=116 Identities=9% Similarity=-0.031 Sum_probs=65.7
Q ss_pred CcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEeccCC--ccccc-hhHHHHHh--cCCCccccC
Q 007075 417 LRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGS--VHAHN-VGVSLLTK--VGLKHLIAK 491 (619)
Q Consensus 417 ~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~~g~--~~~~r-~~~~~l~~--~gl~~~v~~ 491 (619)
++++.... ..+...++..+|+.+ .--+.++.|.+..+.|||...-+ .+... .| +.-. --+++-++.
T Consensus 598 ~~~~~~~~---~~di~~ll~~aD~lI----TDySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg--~y~d~~~~~pg~~~~ 668 (729)
T 3l7i_A 598 NFAIDVSN---YNDVSELFLISDCLI----TDYSSVMFDYGILKRPQFFFAYDIDKYDKGLRG--FYMNYMEDLPGPIYT 668 (729)
T ss_dssp TTEEECTT---CSCHHHHHHTCSEEE----ESSCTHHHHHGGGCCCEEEECTTTTTTTSSCCS--BSSCTTSSSSSCEES
T ss_pred CcEEeCCC---CcCHHHHHHHhCEEE----eechHHHHhHHhhCCCEEEecCCHHHHhhccCC--cccChhHhCCCCeEC
Confidence 56665554 345667778899998 22346899999999999976432 22221 11 0111 135667889
Q ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Q 007075 492 NEDEYVQLALQLASDVTALANLRMSLRDLMSKSPVCDGQNFALGLESTYRNM 543 (619)
Q Consensus 492 ~~~~y~~~a~~L~~d~~~~~~lr~~~r~~~~~~~~~~~~~~~~~le~~y~~~ 543 (619)
|.++.++.......+.......++..+++.- +.-|+..--+-++.++...
T Consensus 669 ~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 669 EPYGLAKELKNLDKVQQQYQEKIDAFYDRFC--SVDNGKASQYIGDLIHKDI 718 (729)
T ss_dssp SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHS--TTCCSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhhhccchhHHHHHHHHHHHhC--CccCChHHHHHHHHHHhcC
Confidence 9999988877665443333344444444432 2234444334444444433
No 391
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=28.51 E-value=44 Score=25.59 Aligned_cols=24 Identities=25% Similarity=0.520 Sum_probs=16.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 3 NLGVAYGEMLKFDMAIVFYELAFH 26 (619)
Q Consensus 3 ~lg~~~~~~g~~~~A~~~~~~al~ 26 (619)
.+|+-+...|+|+.|+.+|+.+++
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHHH
Confidence 456666777777777777776665
No 392
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=28.12 E-value=97 Score=30.65 Aligned_cols=77 Identities=10% Similarity=0.021 Sum_probs=47.8
Q ss_pred HHHHHH-HCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCc-hhHH
Q 007075 377 WARILC-AVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT-TTTC 454 (619)
Q Consensus 377 ~~~il~-~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~-~t~~ 454 (619)
..+.+. +.|+..++-+.+. ..++.++..++.|+. .++ + .+.++.+.. ..+|+++.+.|-..+ ..+.
T Consensus 17 ~~~~l~~~~~~~~l~av~d~-----~~~~~~~~~~~~g~~-~~~-~----~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~ 84 (344)
T 3mz0_A 17 HINRITNKLSGAEIVAVTDV-----NQEAAQKVVEQYQLN-ATV-Y----PNDDSLLAD-ENVDAVLVTSWGPAHESSVL 84 (344)
T ss_dssp HHHHHHHTCSSEEEEEEECS-----SHHHHHHHHHHTTCC-CEE-E----SSHHHHHHC-TTCCEEEECSCGGGHHHHHH
T ss_pred HHHHHHhhCCCcEEEEEEcC-----CHHHHHHHHHHhCCC-Cee-e----CCHHHHhcC-CCCCEEEECCCchhHHHHHH
Confidence 344455 7899988865443 134555666777863 222 1 112333332 348988877776554 4788
Q ss_pred HhhhcCCcEEe
Q 007075 455 ESLYMGVPCVT 465 (619)
Q Consensus 455 eAl~~GvPvVt 465 (619)
+|+..|++|++
T Consensus 85 ~al~~Gk~vl~ 95 (344)
T 3mz0_A 85 KAIKAQKYVFC 95 (344)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHCCCcEEE
Confidence 99999999996
No 393
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=28.04 E-value=2.7e+02 Score=31.99 Aligned_cols=144 Identities=10% Similarity=0.127 Sum_probs=80.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 007075 3 NLGVAYGEMLKFDMAIVFYELAFHFNPHC--AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQG 80 (619)
Q Consensus 3 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~a~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 80 (619)
.||.++...++ +++.+.+...+..+... ..+-+.+|.++...|+-+....++..+.+...+...-...+|..+...|
T Consensus 460 GLGla~~GS~~-eev~e~L~~~L~dd~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e~~~e~vrR~aalgLGll~~g 538 (963)
T 4ady_A 460 GIGLAAMGSAN-IEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYG 538 (963)
T ss_dssp HHHHHSTTCCC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHhcCCCC-HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhccCcHHHHHHHHHHHHhhhCC
Confidence 46777776665 56777777777644322 2456678888888888877777777776543332222233444445667
Q ss_pred CHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcCC
Q 007075 81 KMDAAAEMIEKAIAANPTYAE----AYNNLGVLYRDAGSISLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGH 151 (619)
Q Consensus 81 ~~~eA~~~~~~al~~~p~~~~----a~~~Lg~~~~~~g~~~eA~~~~~~al~~~P~~~~a~~~~~la~~~~~~g~ 151 (619)
+.+.+-...+.... .. ++. +-+.+|.+|...|+...-.+.+..+.. +++ ......-.+++..+..|+
T Consensus 539 ~~e~~~~li~~L~~-~~-dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~-d~~-d~VRraAViaLGlI~~g~ 609 (963)
T 4ady_A 539 RQELADDLITKMLA-SD-ESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVS-DSN-DDVRRAAVIALGFVLLRD 609 (963)
T ss_dssp CGGGGHHHHHHHHH-CS-CHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHH-CSC-HHHHHHHHHHHHHHTSSS
T ss_pred ChHHHHHHHHHHHh-CC-CHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcc-CCc-HHHHHHHHHHHHhhccCC
Confidence 77666555554443 32 232 334567777788885444335555543 332 223333334444443343
No 394
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=27.55 E-value=3.4e+02 Score=27.76 Aligned_cols=67 Identities=9% Similarity=0.028 Sum_probs=48.2
Q ss_pred CCcHHHHHHHHHHHHHcCC--HHHHHHHHHHHHhh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 29 PHCAEACNNLGVIYKDRDN--LDKAVECYQMALSI-----KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIAA 95 (619)
Q Consensus 29 p~~~~a~~~la~~~~~~g~--~~~A~~~~~~al~l-----~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~ 95 (619)
...+.++.+||.+-...-. ...++++|++|+.. .-.+...+..+|-.+++.+++.+|+.++-++-..
T Consensus 259 ~~YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~V 332 (489)
T 4gq4_A 259 ERYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 332 (489)
T ss_dssp TTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhcchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhh
Confidence 3456777777776553322 22367788888874 4455667888899999999999999999887544
No 395
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=27.54 E-value=71 Score=25.43 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=24.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q 007075 36 NNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSL 69 (619)
Q Consensus 36 ~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 69 (619)
..+|..+...|+++.|+.+|-+|+...|.-.+.+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL 57 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLL 57 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 4577777777888888888888888777655543
No 396
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=26.84 E-value=60 Score=24.81 Aligned_cols=27 Identities=22% Similarity=0.187 Sum_probs=22.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007075 103 YNNLGVLYRDAGSISLAIDAYEQCLKI 129 (619)
Q Consensus 103 ~~~Lg~~~~~~g~~~eA~~~~~~al~~ 129 (619)
...+|+=|...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 456788888899999999999988764
No 397
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=26.78 E-value=2.4e+02 Score=22.42 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=59.3
Q ss_pred ceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcc---------cCcEee-cCC-CCCCchhHHH
Q 007075 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS---------LMDISL-DTF-PYAGTTTTCE 455 (619)
Q Consensus 387 a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~---------~~Dv~L-dt~-~~~g~~t~~e 455 (619)
.+++++.+ +...+..+...+.+.|.. ..|..... ..+.+..+. ..|+++ |.. |-..|..+++
T Consensus 3 ~~ilivdd---~~~~~~~l~~~L~~~~~~-~~v~~~~~---~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~ 75 (140)
T 1k68_A 3 KKIFLVED---NKADIRLIQEALANSTVP-HEVVTVRD---GMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLA 75 (140)
T ss_dssp CEEEEECC---CHHHHHHHHHHHHTCSSC-CEEEEECS---HHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHH
T ss_pred CeEEEEeC---CHHHHHHHHHHHHhcCCC-ceEEEECC---HHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHH
Confidence 35555543 457788899999988875 45665554 355565543 478775 544 3344666666
Q ss_pred hhh-----cCCcEEeccCCccccchhHHHHHhcCCCccccC--CHHHHHHH
Q 007075 456 SLY-----MGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAK--NEDEYVQL 499 (619)
Q Consensus 456 Al~-----~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~--~~~~y~~~ 499 (619)
.+. ..+|||.+.+..-.. ...-....|..+++.. +.+++.+.
T Consensus 76 ~l~~~~~~~~~pii~ls~~~~~~--~~~~~~~~g~~~~l~kP~~~~~l~~~ 124 (140)
T 1k68_A 76 EIKSDPTLKRIPVVVLSTSINED--DIFHSYDLHVNCYITKSANLSQLFQI 124 (140)
T ss_dssp HHHHSTTGGGSCEEEEESCCCHH--HHHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred HHHcCcccccccEEEEecCCcHH--HHHHHHHhchhheecCCCCHHHHHHH
Confidence 664 578999776642211 1112223466666643 44444433
No 398
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=26.67 E-value=2.6e+02 Score=22.68 Aligned_cols=77 Identities=12% Similarity=0.148 Sum_probs=48.2
Q ss_pred CceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhc--ccCcEee-cCC-CCCCchhHHHhhhc--
Q 007075 386 NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY--SLMDISL-DTF-PYAGTTTTCESLYM-- 459 (619)
Q Consensus 386 ~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~--~~~Dv~L-dt~-~~~g~~t~~eAl~~-- 459 (619)
..+++++.+ +...+..+...+.+.|.. ..|..... ..+.+..+ ...|+++ |.. |-..|..+++.+-.
T Consensus 5 ~~~ILivdd---~~~~~~~l~~~L~~~~~~-~~v~~~~~---~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~ 77 (144)
T 3kht_A 5 SKRVLVVED---NPDDIALIRRVLDRKDIH-CQLEFVDN---GAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPG 77 (144)
T ss_dssp CEEEEEECC---CHHHHHHHHHHHHHTTCC-EEEEEESS---HHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSS
T ss_pred CCEEEEEeC---CHHHHHHHHHHHHhcCCC-eeEEEECC---HHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcc
Confidence 345666643 457788899999998876 34555443 34555544 3357764 544 33456677777654
Q ss_pred ---CCcEEeccCC
Q 007075 460 ---GVPCVTMAGS 469 (619)
Q Consensus 460 ---GvPvVt~~g~ 469 (619)
++|||.+.+.
T Consensus 78 ~~~~~pii~~s~~ 90 (144)
T 3kht_A 78 ANQHTPIVILTDN 90 (144)
T ss_dssp TTTTCCEEEEETT
T ss_pred cccCCCEEEEeCC
Confidence 7899977654
No 399
>1r1m_A Outer membrane protein class 4; 1.90A {Neisseria meningitidis} SCOP: d.79.7.1
Probab=26.66 E-value=81 Score=27.78 Aligned_cols=53 Identities=19% Similarity=0.122 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHCCCceEEEeccCC--CCHHH--------HHHHHHHHHHcCCCCCcEEEcCC
Q 007075 372 KVLQVWARILCAVPNSRLVVKCKPF--CCDSV--------RHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 372 ~~~~~~~~il~~~P~a~l~l~g~~~--~~~~~--------~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
..++.++.+|+..|...+.|.|-.- +.... ...+.+.+.+.||+++||...|.
T Consensus 32 ~~L~~la~~L~~~~~~~I~I~GhTD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~G~ 94 (164)
T 1r1m_A 32 DNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSRISAVGL 94 (164)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred HHHHHHHHHHHhCCCcEEEEEEEeCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE
Confidence 4567777888888888888887321 12211 14567777889999999988765
No 400
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=26.65 E-value=2.3e+02 Score=22.10 Aligned_cols=45 Identities=11% Similarity=0.020 Sum_probs=30.1
Q ss_pred CccCcHHHHHhcccCcEeecCCCCCCch-hHHHhhhcCCcEEeccC
Q 007075 424 LILLNHDHMQAYSLMDISLDTFPYAGTT-TTCESLYMGVPCVTMAG 468 (619)
Q Consensus 424 ~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~-t~~eAl~~GvPvVt~~g 468 (619)
.+.+..+....+..+|+++++.|+.... ..-.+...|++++-+.+
T Consensus 56 d~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 56 DAKDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp CTTCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCS
T ss_pred cCCCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEecC
Confidence 3333456667778899999988775544 44445567888886544
No 401
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=26.50 E-value=1.6e+02 Score=30.19 Aligned_cols=65 Identities=9% Similarity=0.034 Sum_probs=44.1
Q ss_pred CcHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007075 30 HCAEACNNLGVIYKDRDNLD--KAVECYQMALSI-----KPNFSQSLNNLGVVYTVQGKMDAAAEMIEKAIA 94 (619)
Q Consensus 30 ~~~~a~~~la~~~~~~g~~~--~A~~~~~~al~l-----~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~ 94 (619)
..+.++-|||.+-...--.. .++.+|.+|+.. .-.+...+..+|..+++.+++.+|+..+-++-.
T Consensus 275 rYPmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 275 RYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp TCHHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 34556666666544322111 367788888764 345566788889999999999999998876643
No 402
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=26.50 E-value=49 Score=30.23 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=25.7
Q ss_pred hcccCcEeecCCCCCCch--hHHHhhhcCCcEEeccCCcc
Q 007075 434 AYSLMDISLDTFPYAGTT--TTCESLYMGVPCVTMAGSVH 471 (619)
Q Consensus 434 ~~~~~Dv~Ldt~~~~g~~--t~~eAl~~GvPvVt~~g~~~ 471 (619)
....+|.|+- .|=+.|| ++.||+..|.||+.+.+..+
T Consensus 115 m~~~sda~Iv-lpGG~GTL~E~~eal~~~kPV~lln~~g~ 153 (195)
T 1rcu_A 115 LLRNADVVVS-IGGEIGTAIEILGAYALGKPVILLRGTGG 153 (195)
T ss_dssp HHTTCSEEEE-ESCCHHHHHHHHHHHHTTCCEEEETTSCH
T ss_pred HHHhCCEEEE-ecCCCcHHHHHHHHHhcCCCEEEECCCCc
Confidence 3456776653 2333455 78999999999999977543
No 403
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=26.49 E-value=50 Score=29.33 Aligned_cols=36 Identities=11% Similarity=-0.012 Sum_probs=23.7
Q ss_pred HHhcccCcEee---cCCCCCCch--hHHHhhhcCCcEEecc
Q 007075 432 MQAYSLMDISL---DTFPYAGTT--TTCESLYMGVPCVTMA 467 (619)
Q Consensus 432 ~~~~~~~Dv~L---dt~~~~g~~--t~~eAl~~GvPvVt~~ 467 (619)
+..++.||+++ |...-.-|| -+--|.+.|+|||.+.
T Consensus 76 ~~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 76 LTGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp HHHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 34578899885 432222222 4566889999999983
No 404
>2hlv_A Odorant-binding protein; domain swapping, transport protein; HET: LIK; 1.65A {Bos taurus} PDB: 1gt1_A* 1gt3_A* 1gt4_A* 1gt5_A* 1hn2_A* 1obp_A 1g85_A 1pbo_A*
Probab=26.49 E-value=81 Score=27.18 Aligned_cols=38 Identities=16% Similarity=0.020 Sum_probs=31.0
Q ss_pred ceEEEecc-CCCCHHHHHHHHHHHHHcCCCCCcEEEcCC
Q 007075 387 SRLVVKCK-PFCCDSVRHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 387 a~l~l~g~-~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
-.+||.+. +..++...+++.+.+++.|++.++|++++.
T Consensus 114 ~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~ 152 (160)
T 2hlv_A 114 ELTELFVKGLNVEDEDLEKFWKLTEDKGIDKKNVVNFLE 152 (160)
T ss_dssp EEEEEEECSSSCCHHHHHHHHHHHHHTTCCGGGEEETTS
T ss_pred EEEEEEccCCCCCHHHHHHHHHHHHHcCCCHHHEEECCC
Confidence 36777775 334678899999999999999999998776
No 405
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=26.39 E-value=1.1e+02 Score=26.80 Aligned_cols=84 Identities=12% Similarity=0.054 Sum_probs=45.7
Q ss_pred CCceEEEeccCCCCH--HHHHHHHHHHHHcCC-CCCcEEEcCCccC----------------------cHHHHHhcccCc
Q 007075 385 PNSRLVVKCKPFCCD--SVRHRFLSTLEQLGL-ESLRVDLLPLILL----------------------NHDHMQAYSLMD 439 (619)
Q Consensus 385 P~a~l~l~g~~~~~~--~~~~~l~~~~~~~Gi-~~~rv~f~g~~~~----------------------~~~~~~~~~~~D 439 (619)
|..++.|.|+=+... ...+++++.+++.|. +... +|.|.... ...-+..++.||
T Consensus 2 ~~~kIYLAGP~F~~~q~~~~~~~~~~L~~~g~v~~~~-v~~P~~~~~~~~~~~~~~~~~~~~~~~~~I~~~D~~~i~~aD 80 (157)
T 1f8y_A 2 PKKTIYFGAGWFTDRQNKAYKEAMEALKENPTIDLEN-SYVPLDNQYKGIRVDEHPEYLHDKVWATATYNNDLNGIKTND 80 (157)
T ss_dssp CCBCEEEECCCSSHHHHHHHHHHHHHHHHCTTBCCTT-SBCGGGCSGGGCCTTTCGGGGGCHHHHHHHHHHHHHHHHTSS
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHHHCCCccccc-eECcccccccccccccccccccChHHHHHHHHHhHHHHHhCC
Confidence 455777777533332 234566667777774 1011 23333210 112234568899
Q ss_pred Ee---ecCC-CCCC-chhHHHhhhcCCcEEeccCC
Q 007075 440 IS---LDTF-PYAG-TTTTCESLYMGVPCVTMAGS 469 (619)
Q Consensus 440 v~---Ldt~-~~~g-~~t~~eAl~~GvPvVt~~g~ 469 (619)
++ ||.. +-.| +.-+--|.+.|+|||.+..+
T Consensus 81 ~vvA~ldg~~~D~GT~~EiGyA~A~gkPVv~~~~~ 115 (157)
T 1f8y_A 81 IMLGVYIPDEEDVGLGMELGYALSQGKYVLLVIPD 115 (157)
T ss_dssp EEEEECCGGGCCHHHHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEEcCCCCCCccHHHHHHHHHHCCCeEEEEEcC
Confidence 97 4422 3333 22566789999999987643
No 406
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=26.35 E-value=2.3e+02 Score=28.84 Aligned_cols=47 Identities=19% Similarity=0.232 Sum_probs=35.1
Q ss_pred cCCcEEeccCCccccchhHHHHHhcCCCccccCCHHHHHHHHHHhhcC
Q 007075 459 MGVPCVTMAGSVHAHNVGVSLLTKVGLKHLIAKNEDEYVQLALQLASD 506 (619)
Q Consensus 459 ~GvPvVt~~g~~~~~r~~~~~l~~~gl~~~v~~~~~~y~~~a~~L~~d 506 (619)
..+|||..-+.+.. .-|-.+|...|++-..++|.++-++++++++.+
T Consensus 348 ~~~Pivvrl~G~n~-~~g~~~L~~~gl~~~~~~~~~~Aa~~~v~~~~~ 394 (395)
T 2fp4_B 348 LKVPLVVRLEGTNV-HEAQNILTNSGLPITSAVDLEDAAKKAVASVTK 394 (395)
T ss_dssp CCSCEEEEEEETTH-HHHHHHHHHTCSCCEECSSHHHHHHHHHHTTC-
T ss_pred CCCeEEEEcCCCCH-HHHHHHHHHCCCceEeCCCHHHHHHHHHHHhhc
Confidence 68998865443332 237778888899877779999999999999865
No 407
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=26.26 E-value=68 Score=32.64 Aligned_cols=77 Identities=18% Similarity=0.001 Sum_probs=47.9
Q ss_pred HHHHHCCCceEEE-eccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhc----ccCcEeecCCCCCCc-hh
Q 007075 379 RILCAVPNSRLVV-KCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY----SLMDISLDTFPYAGT-TT 452 (619)
Q Consensus 379 ~il~~~P~a~l~l-~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~----~~~Dv~Ldt~~~~g~-~t 452 (619)
..+...|+..++- +.+. ..++.++..++.|+...++ ..+.++.+..- ..+|+++-+.|...+ ..
T Consensus 32 ~~~~~~~~~~lva~v~d~-----~~~~a~~~a~~~g~~~~~~-----~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~ 101 (398)
T 3dty_A 32 CAALRDNTFVLVAGAFDI-----DPIRGSAFGEQLGVDSERC-----YADYLSMFEQEARRADGIQAVSIATPNGTHYSI 101 (398)
T ss_dssp HHHHGGGSEEEEEEECCS-----SHHHHHHHHHHTTCCGGGB-----CSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHH
T ss_pred HHHhhCCCeEEEEEEeCC-----CHHHHHHHHHHhCCCccee-----eCCHHHHHhcccccCCCCCEEEECCCcHHHHHH
Confidence 3355678888774 4332 2345566677889863232 12234444431 238888777766554 58
Q ss_pred HHHhhhcCCcEEe
Q 007075 453 TCESLYMGVPCVT 465 (619)
Q Consensus 453 ~~eAl~~GvPvVt 465 (619)
+.+||..|++|++
T Consensus 102 ~~~al~aGkhVl~ 114 (398)
T 3dty_A 102 TKAALEAGLHVVC 114 (398)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHHCCCeEEE
Confidence 8999999999997
No 408
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=25.79 E-value=3.5e+02 Score=23.99 Aligned_cols=98 Identities=10% Similarity=0.023 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhc--ccCcEeecCCCCCCchhHHHhhhc---CCcEEeccCCccc
Q 007075 398 CDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAY--SLMDISLDTFPYAGTTTTCESLYM---GVPCVTMAGSVHA 472 (619)
Q Consensus 398 ~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~--~~~Dv~Ldt~~~~g~~t~~eAl~~---GvPvVt~~g~~~~ 472 (619)
+...+..+...+...|.. |..... ..+.+..+ ...|++| .|-..|..+++.+.. .+|||.+.+..-.
T Consensus 9 ~~~~~~~l~~~L~~~g~~---v~~~~~---~~~al~~l~~~~~dlvi--lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~ 80 (223)
T 2hqr_A 9 NSVLGGEIEKGLNVKGFM---ADVTES---LEDGEYLMDIRNYDLVM--VSDKNALSFVSRIKEKHSSIVVLVSSDNPTS 80 (223)
T ss_dssp CHHHHHHHHHHHGGGTCC---EEEESS---HHHHHHHHTTSCCSEEE--ECCTTHHHHHHHHHHHCTTSEEEEEESSCCH
T ss_pred CHHHHHHHHHHHHHCCcE---EEEECC---HHHHHHHHhcCCCCEEE--eCCCCHHHHHHHHHhCCCCCcEEEEECCCCH
Confidence 456788888888887774 443333 34555554 3479999 666566776666643 7999977764322
Q ss_pred cchhHHHHHhcCCCccccC---CHHHHHHHHHHhhc
Q 007075 473 HNVGVSLLTKVGLKHLIAK---NEDEYVQLALQLAS 505 (619)
Q Consensus 473 ~r~~~~~l~~~gl~~~v~~---~~~~y~~~a~~L~~ 505 (619)
.. ..-....|..+++.. +.+++.+....+..
T Consensus 81 ~~--~~~~~~~Ga~~~l~Kp~~~~~~L~~~i~~~~~ 114 (223)
T 2hqr_A 81 EE--EVHAFEQGADDYIAKPYRSIKALVARIEARLR 114 (223)
T ss_dssp HH--HHHHHHHTCSEEEETTCSCTHHHHHHHHHHTS
T ss_pred HH--HHHHHHcCCCEEEECCCCCHHHHHHHHHHHhc
Confidence 21 112234577777753 56666665555543
No 409
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=25.56 E-value=39 Score=32.26 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=24.2
Q ss_pred ccCcEeecCCCCCCchhHHHhhhcCCcEEec
Q 007075 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466 (619)
Q Consensus 436 ~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~ 466 (619)
..-|++||+| .|.|||.++|+.+|.-+|..
T Consensus 211 ~~~~~vlD~f-~GsGtt~~~a~~~gr~~ig~ 240 (260)
T 1g60_A 211 NPNDLVLDCF-MGSGTTAIVAKKLGRNFIGC 240 (260)
T ss_dssp CTTCEEEESS-CTTCHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEECC-CCCCHHHHHHHHcCCeEEEE
Confidence 4568999987 36689999999999888753
No 410
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=25.32 E-value=1e+02 Score=29.20 Aligned_cols=78 Identities=13% Similarity=0.179 Sum_probs=48.1
Q ss_pred ceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEec
Q 007075 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466 (619)
Q Consensus 387 a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~ 466 (619)
..++++|.. ...+..+.+.+++.|...-.=+|+|..-... ....+..=|+.+-+-|-.-+..+.||-..|+|||++
T Consensus 71 ~~vlfVgTk---~~~q~~V~k~A~~~g~~~v~~rwlgGtLTN~-~t~~f~~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial 146 (252)
T 3u5c_A 71 EDVVAISSR---TFGQRAVLKFAAHTGATPIAGRFTPGSFTNY-ITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIAL 146 (252)
T ss_dssp GGEEEEECS---HHHHHHHHHHHHHSSCEEEESCCCTTSSSCT-TSTTCCCCSEEEESCTTTTHHHHHHHHTTTCCEEEE
T ss_pred CEEEEEeCC---cHHHHHHHHHHHHhCCceecCcccCCcccCh-hhhhccCCceEEEeCCccchHHHHHHHHcCCCEEEE
Confidence 445556643 1334555566666664321112555433222 224566778877777778889999999999999986
Q ss_pred cC
Q 007075 467 AG 468 (619)
Q Consensus 467 ~g 468 (619)
..
T Consensus 147 ~D 148 (252)
T 3u5c_A 147 TD 148 (252)
T ss_dssp EC
T ss_pred Ec
Confidence 65
No 411
>1e5p_A Aphrodisin; lipocalin, pheromone, hamster,; HET: MSE; 1.63A {Mesocricetus auratus} SCOP: b.60.1.1
Probab=25.13 E-value=87 Score=26.62 Aligned_cols=38 Identities=8% Similarity=-0.063 Sum_probs=30.7
Q ss_pred ceEEEeccCC-CCHHHHHHHHHHHHHcCCCCCcEEEcCC
Q 007075 387 SRLVVKCKPF-CCDSVRHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 387 a~l~l~g~~~-~~~~~~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
-.+||.+... -++...+++.+.+++.|++.++|++++.
T Consensus 107 ~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~ii~~~~ 145 (151)
T 1e5p_A 107 NMIVVAGKGNALTPEENEILVQFAHEKKIPVENILNILA 145 (151)
T ss_dssp EEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEEECGG
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCc
Confidence 4667777543 4678899999999999999999998765
No 412
>4erh_A Outer membrane protein A; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.52A {Salmonella enterica subsp}
Probab=25.08 E-value=55 Score=28.10 Aligned_cols=58 Identities=16% Similarity=0.163 Sum_probs=39.1
Q ss_pred CcCCHH---HHHHHHHHHHHC--CCceEEEeccCC--CCH--------HHHHHHHHHHHHcCCCCCcEEEcCC
Q 007075 367 AKITPK---VLQVWARILCAV--PNSRLVVKCKPF--CCD--------SVRHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 367 ~K~~~~---~~~~~~~il~~~--P~a~l~l~g~~~--~~~--------~~~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
..+++. .++.++.+|+.. |+.++.|.|..- +.. .=...+.+.+.+.||+++||...|.
T Consensus 31 ~~l~~~~~~~L~~~a~~l~~~~~~~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~ 103 (148)
T 4erh_A 31 STLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGM 103 (148)
T ss_dssp CSBCHHHHHHHHHHHHHHTCCCTTTCEEEEEEECCTTCTTCSSSSHHHHHHHHHHHHHHTTTCCGGGEEEEEE
T ss_pred cccCHHHHHHHHHHHHHHHhcCCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE
Confidence 345554 566667778877 788999887321 111 1125677888889999999987764
No 413
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=24.93 E-value=1.3e+02 Score=30.00 Aligned_cols=76 Identities=8% Similarity=-0.008 Sum_probs=47.6
Q ss_pred HHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcc--cCcEeecCCCCCCc-hhHH
Q 007075 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS--LMDISLDTFPYAGT-TTTC 454 (619)
Q Consensus 378 ~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~--~~Dv~Ldt~~~~g~-~t~~ 454 (619)
.+.+.+.|+..++.+.+. + .++.++..++.|+.+. +... .++..++. .+|+++.+.|...+ ..+.
T Consensus 22 ~~~l~~~~~~~lv~v~d~--~---~~~~~~~a~~~~~~~~-~~~~------~~~~~ll~~~~~D~V~i~tp~~~h~~~~~ 89 (362)
T 1ydw_A 22 SRAIHLAPNATISGVASR--S---LEKAKAFATANNYPES-TKIH------GSYESLLEDPEIDALYVPLPTSLHVEWAI 89 (362)
T ss_dssp HHHHHHCTTEEEEEEECS--S---HHHHHHHHHHTTCCTT-CEEE------SSHHHHHHCTTCCEEEECCCGGGHHHHHH
T ss_pred HHHHhhCCCcEEEEEEcC--C---HHHHHHHHHHhCCCCC-Ceee------CCHHHHhcCCCCCEEEEcCChHHHHHHHH
Confidence 334566889888766543 1 2345556677787421 1111 22333333 58999888877554 4788
Q ss_pred HhhhcCCcEEe
Q 007075 455 ESLYMGVPCVT 465 (619)
Q Consensus 455 eAl~~GvPvVt 465 (619)
+||..|++|++
T Consensus 90 ~al~aGk~V~~ 100 (362)
T 1ydw_A 90 KAAEKGKHILL 100 (362)
T ss_dssp HHHTTTCEEEE
T ss_pred HHHHCCCeEEE
Confidence 89999999997
No 414
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=24.41 E-value=70 Score=33.08 Aligned_cols=78 Identities=8% Similarity=0.032 Sum_probs=49.1
Q ss_pred HHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcc--cCcEeecCCCCCCc-hhH
Q 007075 377 WARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS--LMDISLDTFPYAGT-TTT 453 (619)
Q Consensus 377 ~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~--~~Dv~Ldt~~~~g~-~t~ 453 (619)
..+.+.+.|+..++-+.+. + .++.++..++.|+....+... .++..++. .+|+++.+.|...+ ..+
T Consensus 99 ~~~~l~~~~~~~lvav~d~--~---~~~~~~~a~~~g~~~~~~~~~------~~~~~ll~~~~vD~V~iatp~~~h~~~~ 167 (433)
T 1h6d_A 99 ILPGFAGCQHSRIEALVSG--N---AEKAKIVAAEYGVDPRKIYDY------SNFDKIAKDPKIDAVYIILPNSLHAEFA 167 (433)
T ss_dssp HHHHTTTCSSEEEEEEECS--C---HHHHHHHHHHTTCCGGGEECS------SSGGGGGGCTTCCEEEECSCGGGHHHHH
T ss_pred HHHHHhhCCCcEEEEEEcC--C---HHHHHHHHHHhCCCccccccc------CCHHHHhcCCCCCEEEEcCCchhHHHHH
Confidence 3445566788888765543 1 234455566778752223221 22333443 68999888877554 478
Q ss_pred HHhhhcCCcEEe
Q 007075 454 CESLYMGVPCVT 465 (619)
Q Consensus 454 ~eAl~~GvPvVt 465 (619)
.+||..|++|++
T Consensus 168 ~~al~aGk~Vl~ 179 (433)
T 1h6d_A 168 IRAFKAGKHVMC 179 (433)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHHCCCcEEE
Confidence 889999999997
No 415
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=24.37 E-value=1.9e+02 Score=22.92 Aligned_cols=27 Identities=26% Similarity=0.353 Sum_probs=15.1
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 007075 72 LGVVYTVQGKMDAAAEMIEKAIAANPT 98 (619)
Q Consensus 72 lg~~~~~~g~~~eA~~~~~~al~~~p~ 98 (619)
+|..+...|+++.|+.+|-+|+...|+
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 455555555555555555555555444
No 416
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=24.29 E-value=1e+02 Score=30.24 Aligned_cols=75 Identities=15% Similarity=0.044 Sum_probs=48.0
Q ss_pred HHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCc-hhHH
Q 007075 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT-TTTC 454 (619)
Q Consensus 376 ~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~-~t~~ 454 (619)
...+.+.+.|+..++-+.+. + .++.++..++.|+. + .+.++.+.. ..+|+++.+.|-..+ ..+.
T Consensus 17 ~~~~~l~~~~~~~l~av~d~--~---~~~~~~~~~~~~~~-----~----~~~~~~l~~-~~~D~V~i~tp~~~h~~~~~ 81 (331)
T 4hkt_A 17 VHAKAVSGNADARLVAVADA--F---PAAAEAIAGAYGCE-----V----RTIDAIEAA-ADIDAVVICTPTDTHADLIE 81 (331)
T ss_dssp HHHHHHHHCTTEEEEEEECS--S---HHHHHHHHHHTTCE-----E----CCHHHHHHC-TTCCEEEECSCGGGHHHHHH
T ss_pred HHHHHHhhCCCcEEEEEECC--C---HHHHHHHHHHhCCC-----c----CCHHHHhcC-CCCCEEEEeCCchhHHHHHH
Confidence 34556677899988855443 1 23445555566653 1 223444432 368998877776554 4788
Q ss_pred HhhhcCCcEEe
Q 007075 455 ESLYMGVPCVT 465 (619)
Q Consensus 455 eAl~~GvPvVt 465 (619)
+|+..|++|++
T Consensus 82 ~al~~gk~v~~ 92 (331)
T 4hkt_A 82 RFARAGKAIFC 92 (331)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCcEEE
Confidence 99999999996
No 417
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=23.86 E-value=98 Score=30.14 Aligned_cols=79 Identities=15% Similarity=0.175 Sum_probs=47.7
Q ss_pred CCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEE
Q 007075 385 PNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCV 464 (619)
Q Consensus 385 P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvV 464 (619)
|+ .++++|.. ...+.-+++.+++.|...-.=+|+|....+ .....++.=|+.+-+-|-.-+..+.||-..|+|||
T Consensus 75 ~~-~ILfVgTk---~~aq~aV~k~A~~tG~~yV~~RWlgGtLTN-~~t~~f~ePdllvV~Dp~~d~qAI~EA~~lnIPtI 149 (305)
T 3iz6_A 75 PQ-DIIVQSAR---PYGQRAVLKFAQYTGAHAIAGRHTPGTFTN-QLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTI 149 (305)
T ss_dssp SC-CEEEECCS---HHHHHHHHHHHHHHTCEEECSCCCTTTTTT-TTTSCSSCCSEEEESCTTTTHHHHHHHHHHTCCEE
T ss_pred CC-eEEEEeCc---HHHHHHHHHHHHHhCCccccCcccCCcccC-cccccccCCceeEEeCcccchHHHHHHHHcCCCEE
Confidence 44 45556543 133445555555655432111345543322 12234566788777777888899999999999999
Q ss_pred eccC
Q 007075 465 TMAG 468 (619)
Q Consensus 465 t~~g 468 (619)
++..
T Consensus 150 ALvD 153 (305)
T 3iz6_A 150 AFCD 153 (305)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8765
No 418
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=23.78 E-value=1.2e+02 Score=26.70 Aligned_cols=38 Identities=8% Similarity=0.142 Sum_probs=25.0
Q ss_pred HHhcccCcEeecCCCCCCchh---HHHhhhcCCcEEeccCC
Q 007075 432 MQAYSLMDISLDTFPYAGTTT---TCESLYMGVPCVTMAGS 469 (619)
Q Consensus 432 ~~~~~~~Dv~Ldt~~~~g~~t---~~eAl~~GvPvVt~~g~ 469 (619)
+..++.||+++-=+.....-| +-=|.+.|+|||++..+
T Consensus 72 ~~~i~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~ 112 (165)
T 2khz_A 72 LNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRP 112 (165)
T ss_dssp HHHHHHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEECT
T ss_pred HHHHHhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEcC
Confidence 467889999853222333334 45578889999987554
No 419
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=23.59 E-value=94 Score=30.23 Aligned_cols=36 Identities=17% Similarity=-0.016 Sum_probs=25.9
Q ss_pred HHHHhcccCcEeecCCCC-CCchhHHHhhhcCCcEEe
Q 007075 430 DHMQAYSLMDISLDTFPY-AGTTTTCESLYMGVPCVT 465 (619)
Q Consensus 430 ~~~~~~~~~Dv~Ldt~~~-~g~~t~~eAl~~GvPvVt 465 (619)
+.-.++..+||.+|-++- ..-..+..++..|+|||+
T Consensus 81 dl~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vVi 117 (288)
T 3ijp_A 81 DPESAFSNTEGILDFSQPQASVLYANYAAQKSLIHII 117 (288)
T ss_dssp CHHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEE
Confidence 455566789999986643 333356778999999996
No 420
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=23.45 E-value=1.3e+02 Score=29.57 Aligned_cols=74 Identities=11% Similarity=0.038 Sum_probs=47.3
Q ss_pred HHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcc--cCcEeecCCCCCCc-hhH
Q 007075 377 WARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS--LMDISLDTFPYAGT-TTT 453 (619)
Q Consensus 377 ~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~--~~Dv~Ldt~~~~g~-~t~ 453 (619)
..+.+.+.|+..++-+.+. + .++.++..++.|+. . + ..++-.++. .+|+++.+.|-..+ ..+
T Consensus 20 ~~~~l~~~~~~~l~av~d~--~---~~~~~~~~~~~~~~-~-~--------~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 84 (330)
T 3e9m_A 20 FVAGLRESAQAEVRGIASR--R---LENAQKMAKELAIP-V-A--------YGSYEELCKDETIDIIYIPTYNQGHYSAA 84 (330)
T ss_dssp HHHHHHHSSSEEEEEEBCS--S---SHHHHHHHHHTTCC-C-C--------BSSHHHHHHCTTCSEEEECCCGGGHHHHH
T ss_pred HHHHHHhCCCcEEEEEEeC--C---HHHHHHHHHHcCCC-c-e--------eCCHHHHhcCCCCCEEEEcCCCHHHHHHH
Confidence 3455667899888855443 1 23445556667774 1 1 123334443 68988877776554 477
Q ss_pred HHhhhcCCcEEe
Q 007075 454 CESLYMGVPCVT 465 (619)
Q Consensus 454 ~eAl~~GvPvVt 465 (619)
.+|+..|++|++
T Consensus 85 ~~al~~gk~vl~ 96 (330)
T 3e9m_A 85 KLALSQGKPVLL 96 (330)
T ss_dssp HHHHHTTCCEEE
T ss_pred HHHHHCCCeEEE
Confidence 899999999996
No 421
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=23.25 E-value=92 Score=31.50 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=47.6
Q ss_pred HHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCc-hhHHHh
Q 007075 378 ARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT-TTTCES 456 (619)
Q Consensus 378 ~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~-~t~~eA 456 (619)
...+.+.|+..++-+.+. + .++.++..++.|+. .+ .+.++.+.. ..+|+++.+.|-..+ ..+..|
T Consensus 19 ~~~l~~~~~~~l~av~d~--~---~~~~~~~a~~~g~~----~~----~~~~ell~~-~~vD~V~i~tp~~~H~~~~~~a 84 (387)
T 3moi_A 19 APAMRHHPDAQIVAACDP--N---EDVRERFGKEYGIP----VF----ATLAEMMQH-VQMDAVYIASPHQFHCEHVVQA 84 (387)
T ss_dssp HHHHHHCTTEEEEEEECS--C---HHHHHHHHHHHTCC----EE----SSHHHHHHH-SCCSEEEECSCGGGHHHHHHHH
T ss_pred HHHHHhCCCeEEEEEEeC--C---HHHHHHHHHHcCCC----eE----CCHHHHHcC-CCCCEEEEcCCcHHHHHHHHHH
Confidence 445667899888866543 2 23344455566775 22 223444443 358988877776554 478899
Q ss_pred hhcCCcEEe
Q 007075 457 LYMGVPCVT 465 (619)
Q Consensus 457 l~~GvPvVt 465 (619)
|..|++|++
T Consensus 85 l~aGk~Vl~ 93 (387)
T 3moi_A 85 SEQGLHIIV 93 (387)
T ss_dssp HHTTCEEEE
T ss_pred HHCCCceee
Confidence 999999996
No 422
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=23.21 E-value=1.2e+02 Score=28.49 Aligned_cols=88 Identities=19% Similarity=0.217 Sum_probs=51.3
Q ss_pred HHHHHHCC-CceEEEeccCCCCHHHHHHHHHHHHHcCCCCC-cEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHH
Q 007075 378 ARILCAVP-NSRLVVKCKPFCCDSVRHRFLSTLEQLGLESL-RVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCE 455 (619)
Q Consensus 378 ~~il~~~P-~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~-rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~e 455 (619)
.+.+..+- +..++++|.. .....-+++.+...|...- .=.|+|..-... ....+..=|+.+-+-|-.-+..+.|
T Consensus 57 ~~~i~~i~~~~~iLfVgtk---~~~~~~V~~~A~~~g~~yv~~~RWlgG~LTN~-~t~~~~~PdlliV~Dp~~e~~ai~E 132 (241)
T 2xzm_B 57 ARVIAAVQHPEDVMVVCSR---IYGQRAAIKFAGYTHCKSTSSSRWTPGTLTNY-QTLKYEEPRVLIVTDPRSDFQAIKE 132 (241)
T ss_dssp HHHHHHCSSGGGEEEECCS---HHHHHHHHHHHHHHTCBCCCCSSCCTTTTTCT-TCTTCCCCSEEEESCTTTTHHHHHH
T ss_pred HHHHHHHhCCCeEEEEECC---HHHHHHHHHHHHHhCCEEeccccccCCcccCc-cccccCCCCEEEEECCCcchHHHHH
Confidence 34444442 3455566643 1233445555556665421 113565543222 1234566777766667778899999
Q ss_pred hhhcCCcEEeccCC
Q 007075 456 SLYMGVPCVTMAGS 469 (619)
Q Consensus 456 Al~~GvPvVt~~g~ 469 (619)
|...|+|||++...
T Consensus 133 A~~l~IPvIalvDT 146 (241)
T 2xzm_B 133 ASYVNIPVIALCDS 146 (241)
T ss_dssp HTTTTCCEEECCCS
T ss_pred HHHhCCCEEEEecC
Confidence 99999999987653
No 423
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=23.11 E-value=1.3e+02 Score=33.07 Aligned_cols=46 Identities=15% Similarity=0.154 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 007075 69 LNNLGVVYTVQGKMDAAAEMIEKAIAANPTYAEAYNNLGVLYRDAG 114 (619)
Q Consensus 69 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~a~~~Lg~~~~~~g 114 (619)
....|...+..|+|.-|.+....++..+|++.++...++.+|.++|
T Consensus 452 ~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~ 497 (658)
T 2cfu_A 452 LLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLG 497 (658)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 3445566667777777777777777777777777777777666555
No 424
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=22.92 E-value=2.1e+02 Score=22.49 Aligned_cols=25 Identities=4% Similarity=-0.213 Sum_probs=13.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC
Q 007075 4 LGVAYGEMLKFDMAIVFYELAFHFN 28 (619)
Q Consensus 4 lg~~~~~~g~~~~A~~~~~~al~~~ 28 (619)
.|..+++.|+|=+|-+.++......
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~ 31 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKA 31 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhC
Confidence 3445555555555555555555444
No 425
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=22.87 E-value=1.2e+02 Score=29.97 Aligned_cols=74 Identities=20% Similarity=0.196 Sum_probs=47.7
Q ss_pred HHHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcc--cCcEeecCCCCCCc-hh
Q 007075 376 VWARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYS--LMDISLDTFPYAGT-TT 452 (619)
Q Consensus 376 ~~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~--~~Dv~Ldt~~~~g~-~t 452 (619)
...+.+.+.|+..++-+.+. + .++.++..++.|+. + ..++-.++. .+|+++.+.|...+ ..
T Consensus 18 ~~~~~l~~~~~~~l~av~d~--~---~~~~~~~a~~~g~~---~--------~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 81 (344)
T 3euw_A 18 VHAANIAANPDLELVVIADP--F---IEGAQRLAEANGAE---A--------VASPDEVFARDDIDGIVIGSPTSTHVDL 81 (344)
T ss_dssp HHHHHHHHCTTEEEEEEECS--S---HHHHHHHHHTTTCE---E--------ESSHHHHTTCSCCCEEEECSCGGGHHHH
T ss_pred HHHHHHHhCCCcEEEEEECC--C---HHHHHHHHHHcCCc---e--------eCCHHHHhcCCCCCEEEEeCCchhhHHH
Confidence 34556677899888855433 1 23444555556632 1 124445555 78999888877554 47
Q ss_pred HHHhhhcCCcEEe
Q 007075 453 TCESLYMGVPCVT 465 (619)
Q Consensus 453 ~~eAl~~GvPvVt 465 (619)
+.+|+..|++|++
T Consensus 82 ~~~al~~gk~v~~ 94 (344)
T 3euw_A 82 ITRAVERGIPALC 94 (344)
T ss_dssp HHHHHHTTCCEEE
T ss_pred HHHHHHcCCcEEE
Confidence 8899999999996
No 426
>3lzd_A DPH2; diphthamide biosynthesis, radical SAM enzyme, gene triplicat iron-sulfur cluster, biosynthetic protein; 2.10A {Pyrococcus horikoshii} PDB: 3lzc_A
Probab=22.86 E-value=1.8e+02 Score=29.37 Aligned_cols=84 Identities=15% Similarity=0.155 Sum_probs=57.0
Q ss_pred HHHHHHHHHC-CCceEEEecc--CCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCC-CCCCc
Q 007075 375 QVWARILCAV-PNSRLVVKCK--PFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTF-PYAGT 450 (619)
Q Consensus 375 ~~~~~il~~~-P~a~l~l~g~--~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~-~~~g~ 450 (619)
+-+..|.+.. .+..=+|+|. +-....+.++|++++++.|.. ..++.+|.+. .+.++-+. +|+|+-+. | -
T Consensus 253 rR~~~I~kA~dA~~~GIIvgTLg~Q~~~~~~~~L~~ll~~~Gkk-~y~i~vg~in--p~KLanF~-iD~fV~vaCP---r 325 (378)
T 3lzd_A 253 KRWAQIAKAMDAKKFGVIVSIKKGQLRLAEAKRIVKLLKKHGRE-ARLIVMNDVN--YHKLEGFP-FEAYVVVACP---R 325 (378)
T ss_dssp HHHHHHHHHTTCCEEEEEEECSTTTCCHHHHHHHHHHHHHTTCE-EEEEEESSCC--HHHHTTSC-CSEEEECSCT---H
T ss_pred HHHHHHHHHhcCCEEEEEEeCCccCCCHHHHHHHHHHHHHcCCc-EEEEEeCCCC--HHHHhCCC-CCEEEEecCC---C
Confidence 3344554332 2333345552 223557789999999999998 7888889874 67777775 99997444 3 3
Q ss_pred hhHHHhhhcCCcEEe
Q 007075 451 TTTCESLYMGVPCVT 465 (619)
Q Consensus 451 ~t~~eAl~~GvPvVt 465 (619)
+++-+.-..-.||||
T Consensus 326 lsidd~~~F~KPvLT 340 (378)
T 3lzd_A 326 VPLDDYGAWRKPVLT 340 (378)
T ss_dssp HHHSCCSCCSSCEEC
T ss_pred ccccchhhCCCcccC
Confidence 566677788899998
No 427
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=22.57 E-value=72 Score=24.78 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 007075 14 FDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALSI 61 (619)
Q Consensus 14 ~~~A~~~~~~al~~~p~~~~a~~~la~~~~~~g~~~~A~~~~~~al~l 61 (619)
...|+.+..+|++. -..|++++|+.+|..+++.
T Consensus 13 ~~~A~~lv~~Ave~---------------D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 13 STAAATVLKRAVEL---------------DSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHcCCHHHHHHHHHHHHHH
Confidence 45677777777665 3457777777777777654
No 428
>1bj7_A D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: b.60.1.1
Probab=22.35 E-value=98 Score=26.47 Aligned_cols=38 Identities=8% Similarity=-0.046 Sum_probs=30.4
Q ss_pred ceEEEeccCC-CCHHHHHHHHHHHHHcCCCCCcEEEcCC
Q 007075 387 SRLVVKCKPF-CCDSVRHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 387 a~l~l~g~~~-~~~~~~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
-.+||.+... -++...+++.+.+++.|++.++|++++.
T Consensus 112 ~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~~ 150 (156)
T 1bj7_A 112 KMTEGLAKGTSFTPEELEKYQQLNSERGVPNENIENLIK 150 (156)
T ss_dssp EEEEEEESSSCCCHHHHHHHHHHHHHHTCCGGGEEECGG
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEecCC
Confidence 3677777543 4668899999999999999999998765
No 429
>1dzk_A PIG OBP, odorant-binding protein; lipocalin, transport, olfaction, sensory transduction; HET: PRZ; 1.48A {Sus scrofa} SCOP: b.60.1.1 PDB: 1dzj_A* 1dzm_A* 1dzp_A* 1e00_A* 1e02_A* 1e06_A* 1hqp_A* 1a3y_A
Probab=21.91 E-value=1e+02 Score=26.37 Aligned_cols=38 Identities=11% Similarity=-0.088 Sum_probs=30.5
Q ss_pred ceEEEeccC-CCCHHHHHHHHHHHHHcCCCCCcEEEcCC
Q 007075 387 SRLVVKCKP-FCCDSVRHRFLSTLEQLGLESLRVDLLPL 424 (619)
Q Consensus 387 a~l~l~g~~-~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~ 424 (619)
-.+||.+.. ..++...+++.+.++..|++.++|++++.
T Consensus 113 ~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~ 151 (157)
T 1dzk_A 113 IMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNIIE 151 (157)
T ss_dssp EEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEEESGG
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCc
Confidence 356777754 34678899999999999999999998765
No 430
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=20.86 E-value=81 Score=29.99 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=46.1
Q ss_pred ceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCchhHHHhhhcCCcEEec
Q 007075 387 SRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466 (619)
Q Consensus 387 a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~ 466 (619)
..++++|.. .....-+++.+.+.|...-.=.|+|..-... ....+..=|+.+-+-|-.-...+.||-..|+|||++
T Consensus 105 ~~iLfVgTk---~~aq~~V~~~A~~~g~~yv~~RWlgG~LTN~-~~~~f~~PdlliV~Dp~~e~~AI~EA~~lgIPvIal 180 (253)
T 3bch_A 105 ADVSVISSR---NTGQRAVLKFAAATGATPIAGRFTPGTFTNQ-IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIAL 180 (253)
T ss_dssp GGEEEEECS---HHHHHHHHHHHHHHCCEEEESCCCTTTTTCC-SCSTTCSCSEEEESCTTTTHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEeCC---HHHHHHHHHHHHHhCCeeecceecCCcccCc-cccccCCCCEEEEECCCccchHHHHHHHhCCCEEEE
Confidence 445555543 1334556666666665421113555433221 112345567766555677788999999999999987
Q ss_pred cCC
Q 007075 467 AGS 469 (619)
Q Consensus 467 ~g~ 469 (619)
...
T Consensus 181 vDT 183 (253)
T 3bch_A 181 CNT 183 (253)
T ss_dssp ECT
T ss_pred EcC
Confidence 653
No 431
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=20.81 E-value=55 Score=30.49 Aligned_cols=98 Identities=16% Similarity=0.119 Sum_probs=55.9
Q ss_pred HHHHHHHHHHcCCCCCcEEEcCCcc--CcHHHHHhc--ccCcEeecCCCCCCchhHHHhh--hcCCcEEeccCCccccch
Q 007075 402 RHRFLSTLEQLGLESLRVDLLPLIL--LNHDHMQAY--SLMDISLDTFPYAGTTTTCESL--YMGVPCVTMAGSVHAHNV 475 (619)
Q Consensus 402 ~~~l~~~~~~~Gi~~~rv~f~g~~~--~~~~~~~~~--~~~Dv~Ldt~~~~g~~t~~eAl--~~GvPvVt~~g~~~~~r~ 475 (619)
++.|.+.+++.|+..+++..--.++ ...+....+ ...|+++-|||.+-- ..++.+ ..++++++ .+..
T Consensus 122 ~~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~l~~~~~d~v~ftS~s~v~-~~~~~~~~~~~~~~~a------IG~~ 194 (229)
T 3p9z_A 122 VSSLDTILLEHGIDFKQAVVYENKLKHLTLSEQNALKPKEKSILIFTAISHAK-AFLHYFEFLENYTAIS------IGNT 194 (229)
T ss_dssp SSCHHHHHHHTTCEEEEEEEEEEEECCCCHHHHHHHSCCTTCEEEECSHHHHH-HHHHHSCCCTTCEEEE------SSHH
T ss_pred hHHHHHHHHHCCCeEEEEEEEEeeCCCccHHHHHHHhcCCCeEEEEECHHHHH-HHHHHhCcccCCEEEE------ECHH
Confidence 4566677888898866554332222 112333333 457888877664221 122222 22455554 2446
Q ss_pred hHHHHHhcCCCcccc--CCHHHHHHHHHHhhcC
Q 007075 476 GVSLLTKVGLKHLIA--KNEDEYVQLALQLASD 506 (619)
Q Consensus 476 ~~~~l~~~gl~~~v~--~~~~~y~~~a~~L~~d 506 (619)
++..+...|+.-.++ .+.++.++.+.+++.+
T Consensus 195 Ta~~l~~~G~~v~va~~~~~e~ll~~l~~l~~~ 227 (229)
T 3p9z_A 195 TALYLQEQGIPSYIAKKPSLEACLELALSLRIK 227 (229)
T ss_dssp HHHHHHHTTCCEEECSSSSHHHHHHHHHHTC--
T ss_pred HHHHHHHcCCCceeCCCCCHHHHHHHHHHHhhh
Confidence 778888889874454 5788888888877543
No 432
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=20.58 E-value=50 Score=32.70 Aligned_cols=30 Identities=17% Similarity=0.110 Sum_probs=24.5
Q ss_pred ccCcEeecCCCCCCchhHHHhhhcCCcEEec
Q 007075 436 SLMDISLDTFPYAGTTTTCESLYMGVPCVTM 466 (619)
Q Consensus 436 ~~~Dv~Ldt~~~~g~~t~~eAl~~GvPvVt~ 466 (619)
..-|++|||| .|.|||..+|+-+|.-.|..
T Consensus 251 ~~~~~VlDpF-~GsGtt~~aa~~~gr~~ig~ 280 (323)
T 1boo_A 251 EPDDLVVDIF-GGSNTTGLVAERESRKWISF 280 (323)
T ss_dssp CTTCEEEETT-CTTCHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEECC-CCCCHHHHHHHHcCCCEEEE
Confidence 4569999987 36689999999999887753
No 433
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=20.34 E-value=1.1e+02 Score=30.55 Aligned_cols=75 Identities=15% Similarity=0.016 Sum_probs=48.2
Q ss_pred HHHHHHHCCCceEEEeccCCCCHHHHHHHHHHHHHcCCCCCcEEEcCCccCcHHHHHhcccCcEeecCCCCCCc-hhHHH
Q 007075 377 WARILCAVPNSRLVVKCKPFCCDSVRHRFLSTLEQLGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGT-TTTCE 455 (619)
Q Consensus 377 ~~~il~~~P~a~l~l~g~~~~~~~~~~~l~~~~~~~Gi~~~rv~f~g~~~~~~~~~~~~~~~Dv~Ldt~~~~g~-~t~~e 455 (619)
..+.+.+.|+..++-+.+. + .++.++..++.|+. .+ .+.++.+.. ..+|+++.+.|-..+ ..+..
T Consensus 43 ~~~~l~~~~~~~l~av~d~--~---~~~~~~~a~~~g~~----~~----~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~~ 108 (350)
T 3rc1_A 43 ALPALEAEPLTEVTAIASR--R---WDRAKRFTERFGGE----PV----EGYPALLER-DDVDAVYVPLPAVLHAEWIDR 108 (350)
T ss_dssp HHHHHHHCTTEEEEEEEES--S---HHHHHHHHHHHCSE----EE----ESHHHHHTC-TTCSEEEECCCGGGHHHHHHH
T ss_pred HHHHHHhCCCeEEEEEEcC--C---HHHHHHHHHHcCCC----Cc----CCHHHHhcC-CCCCEEEECCCcHHHHHHHHH
Confidence 4455667899988755433 1 24455556667775 12 123444332 358998888877555 47889
Q ss_pred hhhcCCcEEe
Q 007075 456 SLYMGVPCVT 465 (619)
Q Consensus 456 Al~~GvPvVt 465 (619)
|+..|++|++
T Consensus 109 al~aGk~Vl~ 118 (350)
T 3rc1_A 109 ALRAGKHVLA 118 (350)
T ss_dssp HHHTTCEEEE
T ss_pred HHHCCCcEEE
Confidence 9999999986
No 434
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=20.14 E-value=2.6e+02 Score=21.89 Aligned_cols=54 Identities=11% Similarity=0.024 Sum_probs=25.6
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHH--HHHHHHcCCHHHHHHHHHHHHH
Q 007075 73 GVVYTVQGKMDAAAEMIEKAIAANPTYA----EAYNNL--GVLYRDAGSISLAIDAYEQCLK 128 (619)
Q Consensus 73 g~~~~~~g~~~eA~~~~~~al~~~p~~~----~a~~~L--g~~~~~~g~~~eA~~~~~~al~ 128 (619)
|..++..|+|-+|-+.++..-...|+.. ..+..+ |......|+. |...+.+++.
T Consensus 8 ~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 8 VLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 3344455555555555555555543311 122222 3333345555 6666666654
Done!