STRING 9.05 
  AT4G30310 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT4G30310
ribitol kinase, putative; ribitol kinase, putative; FUNCTIONS IN- carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN- carbohydrate metabolic process; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Carbohydrate kinase, FGGY (InterPro-IPR000577), Carbohydrate kinase, FGGY, C-terminal (InterPro-IPR018485), Carbohydrate kinase, FGGY, N-terminal (InterPro-IPR018484), Carbohydrate kinase, FGGY-related (InterPro-IPR006003); Has 9520 Blast hits to 8571 proteins in 1304 sp [...] (579 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
ASD2
ASD2 (ALPHA-L-ARABINOFURANOSIDASE 2); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosy [...] (674 aa)
       0.827
BXL3
BXL3 (beta-xylosidase 3); hydrolase, hydrolyzing O-glycosyl compounds; encodes a protein simila [...] (773 aa)
       0.782
AT5G57655
xylose isomerase family protein; xylose isomerase family protein; FUNCTIONS IN- xylose isomeras [...] (477 aa)
     0.747
ASD1
ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosy [...] (678 aa)
       0.716
AT5G67540
glycosyl hydrolase family protein 43; glycosyl hydrolase family protein 43; FUNCTIONS IN- hydro [...] (471 aa)
       0.643
POLD2
POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT); DNA binding / DNA-directed DNA polymerase; DNA POLY [...] (441 aa)
      0.629
BGLU45
BGLU45 (BETA-GLUCOSIDASE 45); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl com [...] (520 aa)
       0.502
FT1
FT1 (FUCOSYLTRANSFERASE 1); fucosyltransferase/ transferase, transferring glycosyl groups; memb [...] (558 aa)
       0.462
AT5G49650
xylulose kinase, putative; xylulose kinase, putative; FUNCTIONS IN- xylulokinase activity, phos [...] (558 aa)
      0.456
AT2G45290
transketolase, putative; transketolase, putative; FUNCTIONS IN- catalytic activity, transketola [...] (741 aa)
      0.439
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: very high (>100%)
Permalink