BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007076
(619 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GG4|A Chain A, The Crystal Structure Of Glycerol Kinase From Yersinia
Pseudotuberculosis
pdb|3GG4|B Chain B, The Crystal Structure Of Glycerol Kinase From Yersinia
Pseudotuberculosis
pdb|3L0Q|A Chain A, The Crystal Structure Of Xlylulose Kinase From Yersinia
Pseudotuberculosis
pdb|3L0Q|B Chain B, The Crystal Structure Of Xlylulose Kinase From Yersinia
Pseudotuberculosis
Length = 554
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/565 (45%), Positives = 357/565 (63%), Gaps = 27/565 (4%)
Query: 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSA 113
S F+GVDVGTGSARAG+FD G+ +G AS I +K + D +EQSS +IW A+C AV A
Sbjct: 5 SYFIGVDVGTGSARAGVFDLQGRXVGQASREITXFKPKADFVEQSSENIWQAVCNAVRDA 64
Query: 114 CSLANVDGEEVKGVGFAATCSLV--DADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKIN 171
+ A+++ +VKG+GF ATCSLV D +G+P++VS +G + +N+IVW DHRA+ QAE+IN
Sbjct: 65 VNQADINPIQVKGLGFDATCSLVVLDKEGNPLTVSPSGRNEQNVIVWXDHRAITQAERIN 124
Query: 172 SRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLC 231
+ PVL++ GG +SPE Q PKLLW+K++ +WS V DL D+L++RAT D+TRSLC
Sbjct: 125 ATKHPVLEFVGGVISPEXQTPKLLWLKQHXPNTWSNVGHLFDLPDFLTWRATKDETRSLC 184
Query: 232 TTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAFPGH 291
+TVCKWTYLGH WD +++ +GL DL+D + AKIG +V G
Sbjct: 185 STVCKWTYLGHEDR---------------WDPSYFKLVGLADLLDNNAAKIGATVKPXGA 229
Query: 292 PLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPXXXXXXXXXXXXXICHRMV 351
PLG GL+ AA E GL+PGT V S+IDAHAG +G++ + R+
Sbjct: 230 PLGHGLSQRAASEXGLIPGTAVSVSIIDAHAGTIGILGA------SGVTGENANFDRRIA 283
Query: 352 LVCGTSTCHMAVSRNKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVXXXX 411
L+ GTST H A SR+ FI G+WGP++SA++P++WL EGGQSATGAL+D+II++H
Sbjct: 284 LIGGTSTAHXAXSRSAHFISGIWGPYYSAILPEYWLNEGGQSATGALIDHIIQSHPCYPA 343
Query: 412 XXXXXXXXHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGI 471
+++E LN L E + +A LT DIH LP FHGNRSP A+P GI
Sbjct: 344 LLEQAKNKGETIYEALNYILRQXAGEPEN--IAFLTNDIHXLPYFHGNRSPRANPNLTGI 401
Query: 472 ICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQ 531
I G+ L ++ + AL YLAT+Q +A GTRHI+E N +G+ IDT A GG KNP+F+Q+
Sbjct: 402 ITGLKLSTTPEDXALRYLATIQALALGTRHIIETXNQNGYNIDTXXASGGGTKNPIFVQE 461
Query: 532 HADIIGCPIILPRENESXXXXXXXXXXXXXKRYSSLIEAMKAMNAAGQVIHPSKDPKVKK 591
HA+ GC +LP E+E+ + SL EA A + G+ + P + K+K
Sbjct: 462 HANATGCAXLLPEESEAXLLGSAXXGTVAAGVFESLPEAXAAXSRIGKTVTPQTN-KIKA 520
Query: 592 YHDAKYLIFRELFEQQVSQRSIMAQ 616
Y+D KY +F + + +++ +
Sbjct: 521 YYDRKYRVFHQXYHDHXRYQALXQE 545
>pdb|3QDK|A Chain A, Structural Insight On Mechanism And Diverse Substrate
Selection Strategy Of Ribulokinase
pdb|3QDK|B Chain B, Structural Insight On Mechanism And Diverse Substrate
Selection Strategy Of Ribulokinase
pdb|3QDK|C Chain C, Structural Insight On Mechanism And Diverse Substrate
Selection Strategy Of Ribulokinase
pdb|3QDK|D Chain D, Structural Insight On Mechanism And Diverse Substrate
Selection Strategy Of Ribulokinase
Length = 572
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/506 (25%), Positives = 212/506 (41%), Gaps = 68/506 (13%)
Query: 58 LGVDVGTGSARAGLFDES-GKLLGSASSP-----IQIWKEGDCIE-------QSSTDIWH 104
+GVD GT S RA L D S G+ L +P I + I+ Q D
Sbjct: 8 IGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVE 67
Query: 105 AICAAVDSACSLANVDGEEVKGVGFAAT-CSL--VDADGSPVSV--SWNGDSRRNIIVWM 159
+ +V + + VD ++V G+G T C++ VD +G P+ + + + + +W
Sbjct: 68 VLTTSVPAVMKESGVDADDVIGIGVDFTACTMLPVDEEGQPLCLLAQYKDNPHSWVKLWK 127
Query: 160 DHRAVKQAEKINS----RNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFRWMDLS 215
H A +A IN R L GG +S E K+ + + ++ ++ ++++ +
Sbjct: 128 HHAAQDKANAINEMAEKRGEAFLPRYGGKISSEWMIAKVWQILDEAEDVYNRTDQFLEAT 187
Query: 216 DWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLI 275
DW+ + TG ++ CT K + +G+ E D E + L
Sbjct: 188 DWIVSQMTGKIVKNSCTAGYKAIW--------HKREGYPSNEFFKALDPRLEHLTTTKL- 238
Query: 276 DGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPXXX 335
R P GL P A+++GL PG V +DAHA V + P
Sbjct: 239 --------RGDIVPLGERAGGLLPEMAEKMGLNPGIAVAVGNVDAHAAVPAVGVTTPG-- 288
Query: 336 XXXXXXXXXXICHRMVLVCGTSTCHMAVSRNKLFIPGVWGPFWSAMVPKFWLTEGGQSAT 395
++V+ GTS CHM + + + G+ G ++P + E GQSA
Sbjct: 289 -------------KLVMAMGTSICHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAV 335
Query: 396 GALLDYIIENHVXXXXXXXXXXXXHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPD 455
G + + ++ H V++ LL S + S +A L
Sbjct: 336 GDIFAWFVK-HGVSAATFDEAQEKGVNVHALLEEK-ASQLRPGESGLLA--------LDW 385
Query: 456 FHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDT 515
++GNRS + D + G++ G TL + ++ +Y A ++ A+GTR IV+ + G ++
Sbjct: 386 WNGNRSILVDTELSGMLLGYTLQTKPEE---IYRALLEATAFGTRAIVDAFHGRGVEVHE 442
Query: 516 LLACGGL-AKNPLFLQQHADIIGCPI 540
L ACGGL KN L +Q AD+ I
Sbjct: 443 LYACGGLPQKNHLLMQIFADVTNREI 468
>pdb|2D4W|A Chain A, Crystal Structure Of Glycerol Kinase From Cellulomonas Sp.
Nt3060
pdb|2D4W|B Chain B, Crystal Structure Of Glycerol Kinase From Cellulomonas Sp.
Nt3060
Length = 504
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 109/512 (21%), Positives = 193/512 (37%), Gaps = 98/512 (19%)
Query: 58 LGVDVGTGSARAGLFDESGKLLGSAS-SPIQIWKEGDCIEQSSTDIWHAICAAVDSACSL 116
L +D GT S+RA +FD SG++ + QI+ +E + IW+ + V A +
Sbjct: 5 LAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTR 64
Query: 117 ANVDGEEVKGVGFAATCSLVDADGSPVSVSWN---GDSRRNIIVWMDHRAVKQAEKINSR 173
N+ E++ VG + +V W+ G N IVW D R K +++
Sbjct: 65 GNLTHEDIAAVGI--------TNQRETAVVWDKTTGKPVYNAIVWQDTRTQKIVDELGGD 116
Query: 174 N--SPVLQYCGGAVSPEMQPPKLLWVKENLQ------ESWSMVFRWMDLSDWLSYRATGD 225
G ++ PK+ W+ +N++ E ++F D W+ + TG
Sbjct: 117 EGAEKYKSIVGLPLATYFSGPKIKWILDNVEGAREKAEKGDLLFGNTDT--WVLWNMTGG 174
Query: 226 DTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIG--LGDLIDGHHAKIG 283
+ T + + D++ W ++ ++G L L D I
Sbjct: 175 TEGGVHVT----------DVTNASRTMLMDLDTLSWREDIAADMGIPLSMLPD-----IR 219
Query: 284 RSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPXXXXXXXXXXX 343
S GH + GLVPG P+ L D A G
Sbjct: 220 SSSEVYGH----------GRPRGLVPGVPIAGILGDQQAATFG-----QACFEVGQAKNT 264
Query: 344 XXICHRMVLVCGTSTCHMAVSRNKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYII 403
+ ++L GT +S+N L + P + EG + TG+L+ ++
Sbjct: 265 YGTGNFLLLNTGTEKV---MSKNGLLTTVC---YKIGDAPAVYALEGSIAVTGSLVQWLR 318
Query: 404 ENHVXXXXXXXXXXXXHVSLFELLNGTLESMIHERNSPFVAALTEDI------HVLPDFH 457
+N + +FE ++P V L + + +P F
Sbjct: 319 DN---------------LGMFE-------------DAPDVEWLAGKVQDNGGAYFVPAFS 350
Query: 458 GNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH-GHKIDTL 516
G +P P ++G + G+T + +A A ++ A+ +R +V+ NA G + L
Sbjct: 351 GLFAPYWRPDARGALVGLTRYVNRNHIA---RAALEATAFQSREVVDAMNADSGVDLTEL 407
Query: 517 LACGGLAKNPLFLQQHADIIGCPIILPRENES 548
GG+ N L +Q AD +G ++ P+ E+
Sbjct: 408 RVDGGMVANELLMQFQADQLGVDVVRPKVAET 439
>pdb|2ZF5|O Chain O, Crystal Structure Of Highly Thermostable Glycerol Kinase
From A Hyperthermophilic Archaeon
pdb|2ZF5|Y Chain Y, Crystal Structure Of Highly Thermostable Glycerol Kinase
From A Hyperthermophilic Archaeon
Length = 497
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 185/503 (36%), Gaps = 91/503 (18%)
Query: 58 LGVDVGTGSARAGLFDESGKL--LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACS 115
L +D GT SARA +FD + +G P Q + +E + +IW A A+ A
Sbjct: 6 LSLDEGTTSARAIIFDRESNIHGIGQYEFP-QHYPRPGWVEHNPEEIWDAQLRAIKDAIQ 64
Query: 116 LANVDGEEVKGVGFA---ATCSLVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINS 172
A ++ ++ +G T + D DG P+ N IVW R + E+I
Sbjct: 65 SARIEPNQIAAIGVTNQRETTLVWDKDGKPLY---------NAIVWQCRRTAEMVEEIKR 115
Query: 173 RNSPVLQYCGGAV-SPEMQPPKLLWVKENL------QESWSMVFRWMDLSDWLSYRATGD 225
+++ G V KL W+ +N+ E ++F +D +L YR TG+
Sbjct: 116 EYGTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKAEKGEVMFGTVDT--FLIYRLTGE 173
Query: 226 DTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRS 285
Y + N ++ WDDE E L D+ + ++ S
Sbjct: 174 HVTD---------YSNASRTMLFN------IKKLDWDDELLE---LFDIPESVLPEVRES 215
Query: 286 VAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPXXXXXXXXXXXXX 345
G+ KEL L PV D A G
Sbjct: 216 SEVYGY---------TKKEL-LGAEIPVSGDAGDQQAALFG------QAAFEAGMVKATY 259
Query: 346 ICHRMVLVCGTSTCHMAVSRNKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIEN 405
+LV +T M + + L WG + V + EG TGA + ++ +
Sbjct: 260 GTGSFILV---NTDKMVLYSDNLLTTIAWGL--NGRVS--YALEGSIFVTGAAVQWLRDG 312
Query: 406 HVXXXXXXXXXXXXHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIAD 465
H S E L LES E ++ +P F G +P D
Sbjct: 313 ---------IKIIKHASETEELATKLES-------------NEGVYFVPAFVGLGAPYWD 350
Query: 466 PKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN 525
++GII G+T + + LA AT++ IAY TR +V+ +I L GG N
Sbjct: 351 QFARGIIIGITRGTGREHLA---RATLEAIAYLTRDVVDEMEKL-VQIKELRVDGGATAN 406
Query: 526 PLFLQQHADIIGCPIILPRENES 548
+Q ADI+ +I P E+
Sbjct: 407 DFLMQFQADILNRKVIRPVVKET 429
>pdb|2DPN|A Chain A, Crystal Structure Of The Glycerol Kinase From Thermus
Thermophilus Hb8
pdb|2DPN|B Chain B, Crystal Structure Of The Glycerol Kinase From Thermus
Thermophilus Hb8
Length = 495
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHC 506
T D++ +P F G +P DP ++G + G+T +S LA A ++G+A+ R +V
Sbjct: 335 TGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLAR---AALEGVAFQVRDVVLAM 391
Query: 507 NAH-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENES 548
G ++ L A GG+A+N LFL+ AD++G P+ +P E+
Sbjct: 392 EEEAGVRLKVLKADGGMAQNRLFLKIQADLLGVPVAVPEVTET 434
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 35/229 (15%)
Query: 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVDSA 113
+ L +D GT S+RA LF G+ + A Q++ + +E +IW A
Sbjct: 2 AFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREV 61
Query: 114 CSLANVDGEEVKGVGFAATCSLVDADGSPVSVSWN---GDSRRNIIVWMDHRAVKQAEKI 170
A + EV +G + ++ W+ G N IVW D R E +
Sbjct: 62 LRRAGAEAGEVLALGIT--------NQRETTLLWDRKTGKPLHNAIVWQDRRTTPLCEAL 113
Query: 171 NSRN-SPVL-QYCGGAVSPEMQPPKLLWVKENL------QESWSMVFRWMDLSDWLSYRA 222
++ P+ + G P KL+W+ EN+ E + F +D WL +
Sbjct: 114 RAKGLEPLFRERTGLLFDPYFSGTKLVWLLENVPGLKARAEGGGVAFGTVD--TWLIWNL 171
Query: 223 TGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGL 271
TG + T T L + H WD E E +G+
Sbjct: 172 TGGKVHATDPTNASRTLLFNLH-------------TLAWDPELLEALGI 207
>pdb|1BU6|O Chain O, Crystal Structures Of Escherichia Coli Glycerol Kinase And
The Mutant A65t In An Inactive Tetramer: Conformational
Changes And Implications For Allosteric Regulation
pdb|1BU6|Y Chain Y, Crystal Structures Of Escherichia Coli Glycerol Kinase And
The Mutant A65t In An Inactive Tetramer: Conformational
Changes And Implications For Allosteric Regulation
pdb|1BU6|Z Chain Z, Crystal Structures Of Escherichia Coli Glycerol Kinase And
The Mutant A65t In An Inactive Tetramer: Conformational
Changes And Implications For Allosteric Regulation
pdb|1BU6|X Chain X, Crystal Structures Of Escherichia Coli Glycerol Kinase And
The Mutant A65t In An Inactive Tetramer: Conformational
Changes And Implications For Allosteric Regulation
Length = 501
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHC 506
T ++V+P F G +P DP ++G I G+T + + AT++ IAY TR ++E
Sbjct: 339 TNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHII---RATLESIAYQTRDVLEAM 395
Query: 507 NAH-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENE 547
A G ++ L GG N +Q +DI+G + P E
Sbjct: 396 QADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVRE 437
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 18/209 (8%)
Query: 53 SRSVFLGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVD 111
+ + +D GT S+RA + D ++ + QI+ + +E +IW + +
Sbjct: 2 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLV 61
Query: 112 SACSLANVDGEEVKGVGFAATCSLVDADGSPVSVSWNGDSRR---NIIVWMDHRAVKQAE 168
+ A++ +++ +G + ++ W ++ + N IVW R + E
Sbjct: 62 EVLTKADISSDQIAAIGI--------TNQRETTIVWEKETGKPIYNAIVWQCRRTAEICE 113
Query: 169 --KINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFR----WMDLSDWLSYRA 222
K + + G + P K+ W+ ++++ S R + + WL ++
Sbjct: 114 HLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKM 173
Query: 223 TGDDTRSLCTTVCKWTYLGHAHMQQMNEK 251
T T T L + H ++K
Sbjct: 174 TQGRVHVTDYTNASRTMLFNIHTLDWDDK 202
>pdb|1BWF|Y Chain Y, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
Analog Showing Substantial Domain Motion
pdb|1BWF|O Chain O, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
Analog Showing Substantial Domain Motion
pdb|1GLJ|Y Chain Y, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
Analog Showing Substantial Domain Motion
pdb|1GLJ|O Chain O, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
Analog Showing Substantial Domain Motion
pdb|1GLL|Y Chain Y, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
Analog Showing Substantial Domain Motion
pdb|1GLL|O Chain O, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
Analog Showing Substantial Domain Motion
Length = 501
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHC 506
T ++V+P F G +P DP ++G I G+T + + AT++ IAY TR ++E
Sbjct: 339 TNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHII---RATLESIAYQTRDVLEAM 395
Query: 507 NAH-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENE 547
A G ++ L GG N +Q +DI+G + P E
Sbjct: 396 QADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVRE 437
>pdb|1GLA|G Chain G, Structure Of The Regulatory Complex Of Escherichia Coli
Iiiglc With Glycerol Kinase
pdb|1GLB|G Chain G, Structure Of The Regulatory Complex Of Escherichia Coli
Iiiglc With Glycerol Kinase
pdb|1GLC|G Chain G, Cation Promoted Association (Cpa) Of A Regulatory And
Target Protein Is Controlled By Phosphorylation
pdb|1GLD|G Chain G, Cation Promoted Association (Cpa) Of A Regulatory And
Target Protein Is Controlled By Phosphorylation
pdb|1GLE|G Chain G, Cation Promoted Association (Cpa) Of A Regulatory And
Target Protein Is Controlled By Phosphorylation
pdb|1GLF|O Chain O, Crystal Structures Of Escherichia Coli Glycerol Kinase And
The Mutant A65t In An Inactive Tetramer: Conformational
Changes And Implications For Allosteric Regulation
pdb|1GLF|Y Chain Y, Crystal Structures Of Escherichia Coli Glycerol Kinase And
The Mutant A65t In An Inactive Tetramer: Conformational
Changes And Implications For Allosteric Regulation
pdb|1GLF|Z Chain Z, Crystal Structures Of Escherichia Coli Glycerol Kinase And
The Mutant A65t In An Inactive Tetramer: Conformational
Changes And Implications For Allosteric Regulation
pdb|1GLF|X Chain X, Crystal Structures Of Escherichia Coli Glycerol Kinase And
The Mutant A65t In An Inactive Tetramer: Conformational
Changes And Implications For Allosteric Regulation
pdb|1BOT|O Chain O, Crystal Structure Of The Complex Between Escherichia Coli
Glycerol Kinase And The Allosteric Regulator Fructose
1,6-bisphosphate.
pdb|1BOT|Z Chain Z, Crystal Structure Of The Complex Between Escherichia Coli
Glycerol Kinase And The Allosteric Regulator Fructose
1,6-bisphosphate.
pdb|1BO5|O Chain O, Crystal Structure Of The Complex Between Escherichia Coli
Glycerol Kinase And The Allosteric Regulator Fructose
1,6-bisphosphate.
pdb|1BO5|Z Chain Z, Crystal Structure Of The Complex Between Escherichia Coli
Glycerol Kinase And The Allosteric Regulator Fructose
1,6-bisphosphate
Length = 501
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHC 506
T ++V+P F G +P DP ++G I G+T + + AT++ IAY TR ++E
Sbjct: 339 TNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHII---RATLESIAYQTRDVLEAM 395
Query: 507 NAH-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENE 547
A G ++ L GG N +Q +DI+G + P E
Sbjct: 396 QADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVRE 437
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 18/209 (8%)
Query: 53 SRSVFLGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVD 111
+ + +D GT S+RA + D ++ + QI+ + +E +IW + +
Sbjct: 2 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLV 61
Query: 112 SACSLANVDGEEVKGVGFAATCSLVDADGSPVSVSWNGDSRR---NIIVWMDHRAVKQAE 168
+ A++ +++ +G + ++ W ++ + N IVW R + E
Sbjct: 62 EVLAKADISSDQIAAIGI--------TNQRETTIVWEKETGKPIYNAIVWQCRRTAEICE 113
Query: 169 --KINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFR----WMDLSDWLSYRA 222
K + + G + P K+ W+ ++++ S R + + WL ++
Sbjct: 114 HLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKM 173
Query: 223 TGDDTRSLCTTVCKWTYLGHAHMQQMNEK 251
T T T L + H ++K
Sbjct: 174 TQGRVHVTDYTNASRTMLFNIHTLDWDDK 202
>pdb|3EZW|A Chain A, Crystal Structure Of A Hyperactive Escherichia Coli
Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
Microfluidic Crystallization Devices
pdb|3EZW|B Chain B, Crystal Structure Of A Hyperactive Escherichia Coli
Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
Microfluidic Crystallization Devices
pdb|3EZW|E Chain E, Crystal Structure Of A Hyperactive Escherichia Coli
Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
Microfluidic Crystallization Devices
pdb|3EZW|G Chain G, Crystal Structure Of A Hyperactive Escherichia Coli
Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
Microfluidic Crystallization Devices
pdb|3EZW|C Chain C, Crystal Structure Of A Hyperactive Escherichia Coli
Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
Microfluidic Crystallization Devices
pdb|3EZW|D Chain D, Crystal Structure Of A Hyperactive Escherichia Coli
Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
Microfluidic Crystallization Devices
pdb|3EZW|F Chain F, Crystal Structure Of A Hyperactive Escherichia Coli
Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
Microfluidic Crystallization Devices
pdb|3EZW|H Chain H, Crystal Structure Of A Hyperactive Escherichia Coli
Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
Microfluidic Crystallization Devices
Length = 526
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHC 506
T ++V+P F G +P DP ++G I G+T + + AT++ IAY TR ++E
Sbjct: 339 TNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHII---RATLESIAYQTRDVLEAM 395
Query: 507 NAH-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENE 547
A G ++ L GG N +Q +DI+G + P E
Sbjct: 396 QADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVRE 437
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 18/209 (8%)
Query: 53 SRSVFLGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVD 111
+ + +D GT S+RA + D ++ + QI+ + +E +IW + +
Sbjct: 2 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLV 61
Query: 112 SACSLANVDGEEVKGVGFAATCSLVDADGSPVSVSWNGDSRR---NIIVWMDHRAVKQAE 168
+ A++ +++ +G + ++ W ++ + N IVW R + E
Sbjct: 62 EVLAKADISSDQIAAIGI--------TNQRETTIVWEKETGKPIYNAIVWQCRRTAEICE 113
Query: 169 --KINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFR----WMDLSDWLSYRA 222
K + + G + P K+ W+ ++++ S R + + WL ++
Sbjct: 114 HLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKM 173
Query: 223 TGDDTRSLCTTVCKWTYLGHAHMQQMNEK 251
T T T L + H ++K
Sbjct: 174 TQGRVHVTDYTNASRTMLFNIHTLDWDDK 202
>pdb|1XUP|O Chain O, Enterococcus Casseliflavus Glycerol Kinase Complexed With
Glycerol
pdb|1XUP|X Chain X, Enterococcus Casseliflavus Glycerol Kinase Complexed With
Glycerol
Length = 487
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 449 DIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA 508
+++V+P F G +P D +++G + G+T ++++ AT+Q +AY ++ +++
Sbjct: 337 EVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFV---RATLQAVAYQSKDVIDTMKK 393
Query: 509 H-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESXXXXXXXXXXXXXKRYSSL 567
G I L GG AKN L +Q ADI+ + E+ + L
Sbjct: 394 DSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDL 453
Query: 568 IEAMKAMNAAGQVIHP 583
E +K+M GQ+ P
Sbjct: 454 DE-LKSMAEEGQMFTP 468
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 83/178 (46%), Gaps = 22/178 (12%)
Query: 58 LGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVDSACSL 116
+ +D GT S+RA +FD +GK +GS+ Q + + +E ++ +IW+++ + + A
Sbjct: 3 MAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIE 62
Query: 117 ANVDGEEVKGVGFAATCSLVDADGSPVSVSWN---GDSRRNIIVWMDHRAVKQAE--KIN 171
+ + E + G+G + +V W+ G N IVW ++ A+ K++
Sbjct: 63 SGIRPEAIAGIGI--------TNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVD 114
Query: 172 SRNSPVLQYCGGAVSPEMQPPKLLWVKENLQ------ESWSMVFRWMDLSDWLSYRAT 223
+ + G + K+ W+ +N++ ++ ++F +D WL ++ T
Sbjct: 115 GHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFGTID--SWLVWKLT 170
>pdb|3H45|X Chain X, Glycerol Kinase H232e With Ethylene Glycol
pdb|3H45|O Chain O, Glycerol Kinase H232e With Ethylene Glycol
pdb|3H45|C Chain C, Glycerol Kinase H232e With Ethylene Glycol
pdb|3H45|D Chain D, Glycerol Kinase H232e With Ethylene Glycol
pdb|3H46|X Chain X, Glycerol Kinase H232e With Glycerol
pdb|3H46|O Chain O, Glycerol Kinase H232e With Glycerol
Length = 506
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 449 DIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA 508
+++V+P F G +P D +++G + G+T ++++ AT+Q +AY ++ +++
Sbjct: 342 EVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFV---RATLQAVAYQSKDVIDTMKK 398
Query: 509 H-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESXXXXXXXXXXXXXKRYSSL 567
G I L GG AKN L +Q ADI+ + E+ + L
Sbjct: 399 DSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDL 458
Query: 568 IEAMKAMNAAGQVIHP 583
E +K+M GQ+ P
Sbjct: 459 DE-LKSMAEEGQMFTP 473
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVDS 112
++ + +D GT S+RA +FD +GK +GS+ Q + + +E ++ +IW+++ + +
Sbjct: 4 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAG 63
Query: 113 ACSLANVDGEEVKGVGFAATCSLVDADGSPVSVSWN---GDSRRNIIVWMDHRAVKQAE- 168
A + + E + G+G + +V W+ G N IVW ++ A+
Sbjct: 64 AFIESGIRPEAIAGIGI--------TNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQ 115
Query: 169 -KINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQ 202
K++ + + G + K+ W+ +N++
Sbjct: 116 LKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIE 150
>pdb|3FLC|O Chain O, Crystal Structure Of The His-Tagged H232r Mutant Of
Glycerol Kinase From Enterococcus Casseliflavus With
Glycerol
pdb|3FLC|X Chain X, Crystal Structure Of The His-Tagged H232r Mutant Of
Glycerol Kinase From Enterococcus Casseliflavus With
Glycerol
Length = 518
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 449 DIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA 508
+++V+P F G +P D +++G + G+T ++++ AT+Q +AY ++ +++
Sbjct: 354 EVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFV---RATLQAVAYQSKDVIDTMKK 410
Query: 509 H-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESXXXXXXXXXXXXXKRYSSL 567
G I L GG AKN L +Q ADI+ + E+ + L
Sbjct: 411 DSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDL 470
Query: 568 IEAMKAMNAAGQVIHP 583
E +K+M GQ+ P
Sbjct: 471 DE-LKSMAEEGQMFTP 485
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVDS 112
++ + +D GT S+RA +FD +GK +GS+ Q + + +E ++ +IW+++ + +
Sbjct: 16 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAG 75
Query: 113 ACSLANVDGEEVKGVGFAATCSLVDADGSPVSVSWN---GDSRRNIIVWMDHRAVKQAE- 168
A + + E + G+G + +V W+ G N IVW ++ A+
Sbjct: 76 AFIESGIRPEAIAGIGI--------TNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQ 127
Query: 169 -KINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQ 202
K++ + + G + K+ W+ +N++
Sbjct: 128 LKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIE 162
>pdb|3H3N|X Chain X, Glycerol Kinase H232r With Glycerol
pdb|3H3N|O Chain O, Glycerol Kinase H232r With Glycerol
pdb|3H3O|O Chain O, Glycerol Kinase H232r With Ethylene Glycol
pdb|3H3O|X Chain X, Glycerol Kinase H232r With Ethylene Glycol
pdb|3H3O|B Chain B, Glycerol Kinase H232r With Ethylene Glycol
pdb|3H3O|C Chain C, Glycerol Kinase H232r With Ethylene Glycol
Length = 506
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 449 DIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA 508
+++V+P F G +P D +++G + G+T ++++ AT+Q +AY ++ +++
Sbjct: 342 EVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFV---RATLQAVAYQSKDVIDTMKK 398
Query: 509 H-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESXXXXXXXXXXXXXKRYSSL 567
G I L GG AKN L +Q ADI+ + E+ + L
Sbjct: 399 DSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDL 458
Query: 568 IEAMKAMNAAGQVIHP 583
E +K+M GQ+ P
Sbjct: 459 DE-LKSMAEEGQMFTP 473
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVDS 112
++ + +D GT S+RA +FD +GK +GS+ Q + + +E ++ +IW+++ + +
Sbjct: 4 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAG 63
Query: 113 ACSLANVDGEEVKGVGFAATCSLVDADGSPVSVSWN---GDSRRNIIVWMDHRAVKQAE- 168
A + + E + G+G + +V W+ G N IVW ++ A+
Sbjct: 64 AFIESGIRPEAIAGIGI--------TNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQ 115
Query: 169 -KINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQ 202
K++ + + G + K+ W+ +N++
Sbjct: 116 LKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIE 150
>pdb|3D7E|O Chain O, Enterococcus Casseliflavus Glycerol Kinase Mutant
His232ala Complexed With Glycerol
pdb|3D7E|X Chain X, Enterococcus Casseliflavus Glycerol Kinase Mutant
His232ala Complexed With Glycerol
Length = 505
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 449 DIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA 508
+++V+P F G +P D +++G + G+T ++++ AT+Q +AY ++ +++
Sbjct: 341 EVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFV---RATLQAVAYQSKDVIDTMKK 397
Query: 509 H-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESXXXXXXXXXXXXXKRYSSL 567
G I L GG AKN L +Q ADI+ + E+ + L
Sbjct: 398 DSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDL 457
Query: 568 IEAMKAMNAAGQVIHP 583
E +K+M GQ+ P
Sbjct: 458 DE-LKSMAEEGQMFTP 472
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVDS 112
++ + +D GT S+RA +FD +GK +GS+ Q + + +E ++ +IW+++ + +
Sbjct: 3 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAG 62
Query: 113 ACSLANVDGEEVKGVGFAATCSLVDADGSPVSVSWN---GDSRRNIIVWMDHRAVKQAE- 168
A + + E + G+G + +V W+ G N IVW ++ A+
Sbjct: 63 AFIESGIRPEAIAGIGI--------TNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQ 114
Query: 169 -KINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQ------ESWSMVFRWMDLSDWLSYR 221
K++ + + G + K+ W+ +N++ ++ ++F +D WL ++
Sbjct: 115 LKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFGTID--SWLVWK 172
Query: 222 AT 223
T
Sbjct: 173 LT 174
>pdb|1R59|O Chain O, Enterococcus Casseliflavus Glycerol Kinase
pdb|1R59|X Chain X, Enterococcus Casseliflavus Glycerol Kinase
Length = 505
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 449 DIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA 508
+++V+P F G +P D +++G + G+T ++++ AT+Q +AY ++ +++
Sbjct: 341 EVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFV---RATLQAVAYQSKDVIDTMKK 397
Query: 509 H-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESXXXXXXXXXXXXXKRYSSL 567
G I L GG AKN L +Q ADI+ + E+ + L
Sbjct: 398 DSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDL 457
Query: 568 IEAMKAMNAAGQVIHP 583
E +K+M GQ+ P
Sbjct: 458 DE-LKSMAEEGQMFTP 472
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVDS 112
++ + +D GT S+RA +FD +GK +GS+ Q + + +E ++ +IW+++ + +
Sbjct: 3 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAG 62
Query: 113 ACSLANVDGEEVKGVGFAATCSLVDADGSPVSVSWN---GDSRRNIIVWMDHRAVKQAE- 168
A + + E + G+G + +V W+ G N IVW ++ A+
Sbjct: 63 AFIESGIRPEAIAGIGI--------TNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQ 114
Query: 169 -KINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQ------ESWSMVFRWMDLSDWLSYR 221
K++ + + G + K+ W+ +N++ ++ ++F +D WL ++
Sbjct: 115 LKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFGTID--SWLVWK 172
Query: 222 AT 223
T
Sbjct: 173 LT 174
>pdb|2ITM|A Chain A, Crystal Structure Of The E. Coli Xylulose Kinase Complexed
With Xylulose
pdb|2ITM|B Chain B, Crystal Structure Of The E. Coli Xylulose Kinase Complexed
With Xylulose
pdb|2NLX|A Chain A, Crystal Structure Of The Apo E. Coli Xylulose Kinase
pdb|2NLX|B Chain B, Crystal Structure Of The Apo E. Coli Xylulose Kinase
Length = 484
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Query: 56 VFLGVDVGTGSARAGLFDESGKLLG------SASSPIQIWKEGDCIEQSSTDIWHAICAA 109
+++G+D+GT + L +E G+++ + S P +W E Q W A A
Sbjct: 1 MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSE-----QDPEQWWQATDRA 55
Query: 110 VDSACSLANVDGEEVKGVGFAAT---CSLVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQ 166
+ + ++ ++VK +G A +L+DA + R I+W D R ++
Sbjct: 56 MKALGDQHSL--QDVKALGIAGQMHGATLLDAQQRVL---------RPAILWNDGRCAQE 104
Query: 167 AEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGD 225
+ +R G + P PKLLWV+ + E + + + + D+L R TG+
Sbjct: 105 CTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGE 163
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 448 EDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCN 507
E + LP G R+P +P++KG+ G+T +LA A ++G+ Y ++ +
Sbjct: 325 EPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELA---RAVLEGVGYALADGMDVVH 381
Query: 508 AHGHKIDTLLACGGLAKNPLFLQQHADIIG 537
A G K ++ GG A++ + Q ADI G
Sbjct: 382 ACGIKPQSVTLIGGGARSEYWRQMLADISG 411
>pdb|3G25|A Chain A, 1.9 Angstrom Crystal Structure Of Glycerol Kinase (Glpk)
From Staphylococcus Aureus In Complex With Glycerol.
pdb|3G25|B Chain B, 1.9 Angstrom Crystal Structure Of Glycerol Kinase (Glpk)
From Staphylococcus Aureus In Complex With Glycerol.
pdb|3G25|C Chain C, 1.9 Angstrom Crystal Structure Of Glycerol Kinase (Glpk)
From Staphylococcus Aureus In Complex With Glycerol.
pdb|3G25|D Chain D, 1.9 Angstrom Crystal Structure Of Glycerol Kinase (Glpk)
From Staphylococcus Aureus In Complex With Glycerol.
pdb|3GE1|A Chain A, 2.7 Angstrom Crystal Structure Of Glycerol Kinase (glpk)
From Staphylococcus Aureus In Complex With Adp And
Glycerol
pdb|3GE1|B Chain B, 2.7 Angstrom Crystal Structure Of Glycerol Kinase (glpk)
From Staphylococcus Aureus In Complex With Adp And
Glycerol
pdb|3GE1|C Chain C, 2.7 Angstrom Crystal Structure Of Glycerol Kinase (glpk)
From Staphylococcus Aureus In Complex With Adp And
Glycerol
pdb|3GE1|D Chain D, 2.7 Angstrom Crystal Structure Of Glycerol Kinase (glpk)
From Staphylococcus Aureus In Complex With Adp And
Glycerol
Length = 501
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHC 506
TE ++V+P F G +P D +++G I G+T + ++ AT++ + Y TR + E
Sbjct: 341 TEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFI---RATLESLCYQTRDVXEAX 397
Query: 507 NAH-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENES 548
+ G + +L GG KN Q ADI+ + P E+
Sbjct: 398 SKDSGIDVQSLRVDGGAVKNNFIXQFQADIVNTSVERPEIQET 440
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 22/179 (12%)
Query: 58 LGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVDSACSL 116
L +D GT S+RA LF++ G++ G A Q + + +E + +IW ++ A +
Sbjct: 9 LSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVXTEVINE 68
Query: 117 ANVDGEEVKGVGFAATCSLVDADGSPVSVSWNGDSRRNI---IVWMDHRAVKQAEKINSR 173
+V +++ G+G + +V W+ + R I IVW + ++ +
Sbjct: 69 NDVRADQIAGIGI--------TNQRETTVVWDKHTGRPIYHAIVWQSRQTQSICSELKQQ 120
Query: 174 --NSPVLQYCGGAVSPEMQPPKLLWVKENLQ------ESWSMVFRWMDLSDWLSYRATG 224
G + P K+ W+ +N++ E+ ++F +D WL ++ +G
Sbjct: 121 GYEQTFRDKTGLLLDPYFAGTKVKWILDNVEGAREKAENGDLLFGTIDT--WLVWKLSG 177
>pdb|4E1J|A Chain A, Crystal Structure Of Glycerol Kinase In Complex With
Glycerol From Sinorhizobium Meliloti 1021
pdb|4E1J|B Chain B, Crystal Structure Of Glycerol Kinase In Complex With
Glycerol From Sinorhizobium Meliloti 1021
pdb|4E1J|C Chain C, Crystal Structure Of Glycerol Kinase In Complex With
Glycerol From Sinorhizobium Meliloti 1021
pdb|4E1J|D Chain D, Crystal Structure Of Glycerol Kinase In Complex With
Glycerol From Sinorhizobium Meliloti 1021
Length = 520
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 14/152 (9%)
Query: 57 FLGVDVGTGSARAGLFDESGKLLGSASSPI-QIWKEGDCIEQSSTDIWHAICAAVDSACS 115
L +D GT S RA +FD + K+ G Q + + +E +IW + + V A
Sbjct: 28 ILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIE 87
Query: 116 LANVDGEEVKGVGFAATCSLVDADGSPVSVSWNGDSRR---NIIVWMDHRAVKQAEKINS 172
+ + ++ +G V V W+ ++ + N IVW D R +K+
Sbjct: 88 KSGITANDIAAIGITNQRETV--------VVWDRETGKPIHNAIVWQDRRTAAFCDKLKK 139
Query: 173 R--NSPVLQYCGGAVSPEMQPPKLLWVKENLQ 202
+ ++ G + P KL W+ N++
Sbjct: 140 KGLEKTFVKKTGLLLDPYFSGTKLNWLLSNVK 171
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVE-- 504
+++++++P F G +P DP ++G I G T ++ + A A ++ + Y TR ++E
Sbjct: 360 SQEVYLVPAFTGLGAPHWDPDARGAIFGXTRNTGPAEFA---RAALEAVCYQTRDLLEAX 416
Query: 505 HCNAHGHKIDTLLAC-GGLAKNPLFLQQHADIIGCPIILP 543
H + + DT+L GG + Q+ +D++ P+ P
Sbjct: 417 HKDWRRNGNDTVLRVDGGXVASDWTXQRLSDLLDAPVDRP 456
>pdb|3GBT|A Chain A, Crystal Structure Of Gluconate Kinase From Lactobacillus
Acidophilus
pdb|3LL3|A Chain A, The Crystal Structure Of Ligand Bound Xylulose Kinase From
Lactobacillus Acidophilus
pdb|3LL3|B Chain B, The Crystal Structure Of Ligand Bound Xylulose Kinase From
Lactobacillus Acidophilus
Length = 504
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 14/176 (7%)
Query: 53 SRSVFLGVDVGTGSARAGLFDESGKLLGSASS--PIQIWKEGDCIEQSSTDIWHAICAAV 110
S +G DVGT + + L+D +GK + S S P+ K G E+ I+ A+ +
Sbjct: 2 SLKYIIGXDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQA-EEDPKLIFDAVQEII 60
Query: 111 DSACSLANVDGEEVKGVGFAATCSLVDADGSPVSVSWNGDSRRNIIVWMDH--RAVKQAE 168
+DG+ A S S + + + + N I W D+ +++ Q
Sbjct: 61 FDLTQ--KIDGK-------IAAISWSSQXHSLIGLGSDDELLTNSITWADNCAKSIVQDA 111
Query: 169 KINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATG 224
K + + G P KLLW+K E +S +W+ + +++ +R TG
Sbjct: 112 KNRGFAQQIYRKTGXPXHPXAPIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTG 167
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHC 506
+ ++ LP G R+PI D ++G G+T + + A A ++GI + +
Sbjct: 331 SRNLIFLPYLGGERAPIWDANARGSFVGLTRXHQKPEXAR---AVIEGIIFNLYDAASNL 387
Query: 507 NAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENES 548
+ K + A GG K+ Q A+I PI+ +E +S
Sbjct: 388 IKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTXKEQQS 429
>pdb|3HZ6|A Chain A, Crystal Structure Of Xylulokinase From Chromobacterium
Violaceum
pdb|3KZB|A Chain A, Crystal Structure Of Xylulokinase From Chromobacterium
Violaceum
Length = 511
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 107/280 (38%), Gaps = 46/280 (16%)
Query: 61 DVGTGSARAGLFDESGKLLGSASSPIQIWKEGDC-IEQSSTDIWHAICAAVDSACSLANV 119
D+GT +A L D G L S ++ + +G+ +EQ + D W+ + S+ + V
Sbjct: 11 DIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGD-WYDAVQRIASSWWQSGV 69
Query: 120 DGEEVKGV---GFAATCSLVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSP 176
D V + G +D D P+ +++ D R +K+AE+IN+R+
Sbjct: 70 DARRVSAIVLSGQXQNFLPLDQDHEPL---------HRAVLYSDKRPLKEAEEINARHGA 120
Query: 177 -----VLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLC 231
L+ A S + P + W Q + + D++ R TG
Sbjct: 121 DNLWSALENPXTAAS--ILPKLVFWRASFPQAFGRLRHVVLGAKDYVVLRLTGRHATDRT 178
Query: 232 TTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAFPGH 291
Y D+ W L D G + + PG
Sbjct: 179 NASTTGLYRPK--------------------DDAWHVELLADY--GFSLDLXPRLLEPGE 216
Query: 292 PLGSGLTPAAAKELGLVPGTPVGTSLIDAHAG--GVGVME 329
+G G++ AA++ G V GTPV L DA A GVGV++
Sbjct: 217 QVG-GVSALAARQTGFVSGTPVLCGLGDAGAATLGVGVLD 255
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 453 LPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHK 512
+P H R P+ P +G + G+T ++ Q + LA ++G A R E K
Sbjct: 348 VPYLHAERCPVELPAPRGALLGVTGATTRAQ---ILLAVLEGAALSLRWCAELLGX--EK 402
Query: 513 IDTLLACGGLAKNPLFLQQHADIIGCPIIL 542
+ L GG A++ +L+ AD + +++
Sbjct: 403 VGLLKVVGGGARSEAWLRXIADNLNVSLLV 432
>pdb|3IFR|A Chain A, The Crystal Structure Of Xylulose Kinase From
Rhodospirillum Rubrum
pdb|3IFR|B Chain B, The Crystal Structure Of Xylulose Kinase From
Rhodospirillum Rubrum
Length = 508
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 87/224 (38%), Gaps = 24/224 (10%)
Query: 381 MVPKFWLTEGGQSATGALLDYIIENHVXXXXXXXXXXXXHVSLFELLNGTLESMIHERNS 440
+VP + G +ATG+ L+++ + E + L+++ E
Sbjct: 290 LVPGLYAPNGCXAATGSALNWLAKLLAPEAG-------------EAAHAQLDALAAE--- 333
Query: 441 PFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTR 500
V A + + LP F G ++PI DP + G G++L + L+ A ++ +A R
Sbjct: 334 --VPAGADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGH---LWRALLEAVALAFR 388
Query: 501 HIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESXXXXXXXXXXXX 560
H V + GH A G ++ ++ AD++ P+ L N
Sbjct: 389 HHVAVLDDIGHAPQRFFASDGGTRSRVWXGIXADVLQRPVQL-LANPLGSAVGAAWVAAI 447
Query: 561 XKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELF 604
+ + A+ G+ I P DP + +D Y F L+
Sbjct: 448 GGGDDLGWDDVTALVRTGEKITP--DPAKAEVYDRLYRDFSALY 489
>pdb|2W41|A Chain A, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
With Adp
pdb|2W41|B Chain B, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
With Adp
Length = 507
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHC 506
T + +P F G +P ++ I GMT ++ + A ++GIA+ IV+
Sbjct: 347 TTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIVR---ALLEGIAFQLNEIVDSL 403
Query: 507 NAH-GHKIDTLLAC-GGLAKNPLFLQQHADIIGCPIILPRENESXXXXXXXXXXXXXKRY 564
+ G ++ +L C GG+ KN F+Q ++DII I + + E K +
Sbjct: 404 TSDMGIEMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLAGLEVKIW 463
Query: 565 SSLIEAMKAMNAAGQVIH 582
SL + + V H
Sbjct: 464 DSLDSVKSLLRRSDAVFH 481
>pdb|2W40|A Chain A, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
With Bound Glycerol
pdb|2W40|B Chain B, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
With Bound Glycerol
pdb|2W40|C Chain C, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
With Bound Glycerol
pdb|2W40|D Chain D, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
With Bound Glycerol
Length = 503
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHC 506
T + +P F G +P ++ I GMT ++ + A ++GIA+ IV+
Sbjct: 343 TTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIVR---ALLEGIAFQLNEIVDSL 399
Query: 507 NAH-GHKIDTLLAC-GGLAKNPLFLQQHADIIGCPIILPRENESXXXXXXXXXXXXXKRY 564
+ G ++ +L C GG+ KN F+Q ++DII I + + E K +
Sbjct: 400 TSDMGIEMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLAGLEVKIW 459
Query: 565 SSLIEAMKAMNAAGQVIH 582
SL + + V H
Sbjct: 460 DSLDSVKSLLRRSDAVFH 477
>pdb|3I8B|A Chain A, The Crystal Structure Of Xylulose Kinase From
Bifidobacterium Adolescentis
Length = 515
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 450 IHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH 509
I ++P F G R+P P + G TL ++ ++ L A V+G+ R +E +
Sbjct: 365 ITLVPYFDGERTP-NRPNATATFSGXTLANTTREN--LARAFVEGLLCSQRDCLELIRSL 421
Query: 510 GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENE 547
G I +L GG AK+ I+G + P +E
Sbjct: 422 GASITRILLIGGGAKSEAIRTLAPSILGXDVTRPATDE 459
>pdb|3VGK|A Chain A, Crystal Structure Of A Rok Family Glucokinase From
Streptomyces Griseus
pdb|3VGK|B Chain B, Crystal Structure Of A Rok Family Glucokinase From
Streptomyces Griseus
pdb|3VGK|C Chain C, Crystal Structure Of A Rok Family Glucokinase From
Streptomyces Griseus
pdb|3VGK|D Chain D, Crystal Structure Of A Rok Family Glucokinase From
Streptomyces Griseus
pdb|3VGK|E Chain E, Crystal Structure Of A Rok Family Glucokinase From
Streptomyces Griseus
pdb|3VGK|F Chain F, Crystal Structure Of A Rok Family Glucokinase From
Streptomyces Griseus
pdb|3VGK|G Chain G, Crystal Structure Of A Rok Family Glucokinase From
Streptomyces Griseus
pdb|3VGK|H Chain H, Crystal Structure Of A Rok Family Glucokinase From
Streptomyces Griseus
pdb|3VGL|A Chain A, Crystal Structure Of A Rok Family Glucokinase From
Streptomyces Griseus In Complex With Glucose And Amppnp
pdb|3VGM|A Chain A, Crystal Structure Of A Rok Family Glucokinase From
Streptomyces Griseus In Complex With Glucose
Length = 321
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 58 LGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLA 117
+GVD+G AG+ DE G++L + EG I AICAAV A
Sbjct: 5 IGVDIGGTKIAAGVVDEEGRILSTFKVATPPTAEG---------IVDAICAAVAGAS--- 52
Query: 118 NVDGEEVKGVGFAATCSLVD 137
+G +V+ VG A + D
Sbjct: 53 --EGHDVEAVGIGAAGYVDD 70
>pdb|3IX1|A Chain A, Periplasmic
N-Formyl-4-Amino-5-Aminomethyl-2-Methylpyrimidine
Binding Protein From Bacillus Halodurans
pdb|3IX1|B Chain B, Periplasmic
N-Formyl-4-Amino-5-Aminomethyl-2-Methylpyrimidine
Binding Protein From Bacillus Halodurans
Length = 302
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 203 ESWSMVFRWMDLSDWLSYRATGDDTRSLCT 232
ESW V W+D DWL +D S T
Sbjct: 272 ESWEEVISWLDAHDWLEQPVVAEDAFSSIT 301
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,678,961
Number of Sequences: 62578
Number of extensions: 763374
Number of successful extensions: 1856
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1780
Number of HSP's gapped (non-prelim): 50
length of query: 619
length of database: 14,973,337
effective HSP length: 105
effective length of query: 514
effective length of database: 8,402,647
effective search space: 4318960558
effective search space used: 4318960558
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)