Query 007076
Match_columns 619
No_of_seqs 269 out of 1714
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 16:32:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007076.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007076hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l0q_A Xylulose kinase; xlylul 100.0 3E-94 1E-98 805.2 50.3 537 54-616 4-545 (554)
2 3ll3_A Gluconate kinase; xylul 100.0 1.4E-91 4.9E-96 774.5 45.7 485 52-613 1-491 (504)
3 3ifr_A Carbohydrate kinase, FG 100.0 6.5E-91 2.2E-95 770.0 44.0 484 54-611 6-496 (508)
4 3hz6_A Xylulokinase; xylulose, 100.0 9.8E-91 3.4E-95 769.1 43.6 485 54-612 4-504 (511)
5 3jvp_A Ribulokinase; PSI-II, N 100.0 6.4E-89 2.2E-93 764.4 46.7 505 54-608 4-539 (572)
6 4e1j_A Glycerol kinase; struct 100.0 3.8E-86 1.3E-90 733.4 43.8 478 50-608 21-517 (520)
7 2itm_A Xylulose kinase, xylulo 100.0 1.4E-85 4.9E-90 724.6 42.3 475 56-609 1-481 (484)
8 3h3n_X Glycerol kinase; ATP-bi 100.0 1.8E-85 6.3E-90 726.5 42.9 477 54-610 4-497 (506)
9 3g25_A Glycerol kinase; IDP007 100.0 3.5E-85 1.2E-89 723.8 42.9 477 54-610 5-498 (501)
10 2p3r_A Glycerol kinase; glycer 100.0 1.2E-85 4.2E-90 728.2 37.4 478 54-610 2-495 (510)
11 3ezw_A Glycerol kinase; glycer 100.0 2.7E-85 9.3E-90 728.5 34.7 476 54-608 3-494 (526)
12 2zf5_O Glycerol kinase; hypert 100.0 2.5E-84 8.7E-89 716.6 38.7 482 54-618 2-495 (497)
13 2w40_A Glycerol kinase, putati 100.0 1.3E-83 4.3E-88 712.1 41.4 474 55-609 4-501 (503)
14 4bc3_A Xylulose kinase; transf 100.0 1.2E-83 4.2E-88 716.6 40.4 475 55-610 10-532 (538)
15 2d4w_A Glycerol kinase; alpha 100.0 3.9E-83 1.3E-87 708.0 42.5 476 55-612 2-499 (504)
16 2dpn_A Glycerol kinase; thermu 100.0 1.5E-82 5.1E-87 702.2 42.8 472 55-610 2-491 (495)
17 3i8b_A Xylulose kinase; strain 100.0 9.5E-81 3.3E-85 688.4 37.4 454 54-597 4-506 (515)
18 3h6e_A Carbohydrate kinase, FG 100.0 5.3E-74 1.8E-78 628.0 36.1 448 54-604 5-468 (482)
19 2uyt_A Rhamnulokinase; rhamnos 100.0 1.2E-72 4E-77 623.0 26.2 461 52-605 1-486 (489)
20 1hux_A Activator of (R)-2-hydr 99.6 2.8E-15 9.5E-20 151.7 13.3 128 392-560 128-257 (270)
21 2qm1_A Glucokinase; alpha-beta 98.6 8.1E-08 2.8E-12 99.3 10.7 91 55-161 6-97 (326)
22 3h1q_A Ethanolamine utilizatio 98.5 1.3E-05 4.4E-10 80.3 23.4 73 481-557 199-272 (272)
23 3vgl_A Glucokinase; ROK family 98.5 2.6E-07 8.7E-12 95.5 9.7 88 55-165 2-90 (321)
24 1z05_A Transcriptional regulat 98.5 5E-07 1.7E-11 97.2 11.7 92 55-163 108-200 (429)
25 2hoe_A N-acetylglucosamine kin 98.5 4E-07 1.4E-11 96.3 9.9 92 55-162 87-179 (380)
26 1zc6_A Probable N-acetylglucos 98.4 7.3E-07 2.5E-11 91.3 11.1 81 50-137 4-88 (305)
27 1z6r_A MLC protein; transcript 98.4 4.5E-07 1.5E-11 96.8 9.8 92 54-162 84-177 (406)
28 2ch5_A NAGK protein; transfera 98.4 6.7E-07 2.3E-11 93.3 10.0 78 52-135 3-81 (347)
29 2yhw_A Bifunctional UDP-N-acet 98.4 5.6E-07 1.9E-11 93.8 9.0 79 55-143 30-109 (343)
30 3r8e_A Hypothetical sugar kina 98.4 8.1E-07 2.8E-11 91.7 9.3 90 55-164 19-110 (321)
31 4db3_A Glcnac kinase, N-acetyl 98.3 2E-06 6.8E-11 89.0 11.4 75 56-143 25-100 (327)
32 3htv_A D-allose kinase, alloki 98.3 6.7E-07 2.3E-11 91.9 6.7 86 55-160 7-93 (310)
33 2e2o_A Hexokinase; acetate and 98.2 1.3E-06 4.3E-11 89.2 6.0 99 56-168 3-103 (299)
34 1woq_A Inorganic polyphosphate 98.1 8.8E-06 3E-10 81.6 9.2 81 53-143 10-92 (267)
35 4htl_A Beta-glucoside kinase; 98.1 1.1E-05 3.6E-10 82.3 9.7 82 56-162 5-88 (297)
36 3epq_A Putative fructokinase; 98.0 8.8E-06 3E-10 83.2 8.6 65 55-139 3-67 (302)
37 3vov_A Glucokinase, hexokinase 98.0 6.7E-06 2.3E-10 84.0 7.2 75 56-143 2-77 (302)
38 2ap1_A Putative regulator prot 97.9 5.1E-05 1.8E-09 78.2 10.7 76 55-143 24-100 (327)
39 3mcp_A Glucokinase; structural 97.9 1.3E-05 4.5E-10 83.9 6.2 84 55-162 9-99 (366)
40 2gup_A ROK family protein; sug 97.7 6.9E-05 2.4E-09 75.9 8.5 69 56-143 5-74 (292)
41 2aa4_A Mannac kinase, putative 97.6 7.3E-05 2.5E-09 75.6 7.7 73 56-143 2-75 (289)
42 3lm2_A Putative kinase; struct 97.6 4.6E-05 1.6E-09 74.2 4.7 67 54-141 5-71 (226)
43 4ehu_A Activator of 2-hydroxyi 97.4 0.00031 1.1E-08 70.4 8.3 72 481-559 182-254 (276)
44 1sz2_A Glucokinase, glucose ki 97.4 0.00044 1.5E-08 71.4 9.2 67 54-138 13-80 (332)
45 1zbs_A Hypothetical protein PG 97.3 0.00034 1.2E-08 70.8 7.0 66 57-131 2-67 (291)
46 2q2r_A Glucokinase 1, putative 97.2 0.00028 9.5E-09 74.2 6.2 76 54-143 28-107 (373)
47 1saz_A Probable butyrate kinas 97.2 0.00026 9E-09 74.6 5.0 80 55-142 2-85 (381)
48 2i7n_A Pantothenate kinase 1; 97.1 0.0047 1.6E-07 63.8 13.9 75 478-557 275-358 (360)
49 4b9q_A Chaperone protein DNAK; 97.0 0.00078 2.7E-08 75.4 7.3 85 480-564 301-386 (605)
50 2yhx_A Hexokinase B; transfera 97.0 0.0018 6.2E-08 69.5 9.5 73 55-131 61-138 (457)
51 3qfu_A 78 kDa glucose-regulate 97.0 0.0011 3.9E-08 69.7 7.9 80 480-559 311-392 (394)
52 4gni_A Putative heat shock pro 97.0 0.0011 3.9E-08 70.2 7.6 81 480-560 312-401 (409)
53 1zxo_A Conserved hypothetical 96.9 0.00019 6.7E-09 72.6 1.4 65 56-131 1-65 (291)
54 3i33_A Heat shock-related 70 k 96.9 0.0012 4.2E-08 69.8 7.5 82 480-561 319-402 (404)
55 4ehu_A Activator of 2-hydroxyi 96.9 0.0015 5.2E-08 65.4 7.7 64 56-132 2-65 (276)
56 1bdg_A Hexokinase; phosphotran 96.8 0.003 1E-07 67.8 9.3 78 55-138 68-149 (451)
57 1dkg_D Molecular chaperone DNA 96.7 0.0022 7.4E-08 67.4 6.8 80 480-559 301-381 (383)
58 2ews_A Pantothenate kinase; PA 96.5 0.0052 1.8E-07 61.7 8.2 75 478-557 206-286 (287)
59 3djc_A Type III pantothenate k 96.5 0.0042 1.4E-07 61.7 7.3 63 56-131 3-65 (266)
60 1cza_N Hexokinase type I; stru 96.2 0.0068 2.3E-07 70.9 7.8 80 55-138 526-608 (917)
61 1cza_N Hexokinase type I; stru 96.2 0.0085 2.9E-07 70.0 8.7 73 55-131 78-156 (917)
62 2v7y_A Chaperone protein DNAK; 96.1 0.0063 2.2E-07 66.5 6.8 83 480-562 270-353 (509)
63 3zyy_X Iron-sulfur cluster bin 95.9 0.018 6.1E-07 63.7 9.0 77 55-131 206-297 (631)
64 3d2f_A Heat shock protein homo 95.9 0.0079 2.7E-07 68.0 6.3 83 480-562 302-385 (675)
65 3o8m_A Hexokinase; rnaseh-like 95.7 0.024 8.3E-07 60.9 9.0 73 55-131 80-156 (485)
66 3bex_A Type III pantothenate k 95.6 0.018 6.3E-07 56.6 6.8 61 56-131 4-64 (249)
67 1yuw_A Heat shock cognate 71 k 95.5 0.015 5.3E-07 64.1 6.7 83 480-562 298-382 (554)
68 1jce_A ROD shape-determining p 95.1 0.016 5.4E-07 59.7 4.7 76 480-558 242-324 (344)
69 2kho_A Heat shock protein 70; 94.9 0.0064 2.2E-07 67.9 1.4 80 480-562 301-384 (605)
70 2h3g_X Biosynthetic protein; p 94.9 0.052 1.8E-06 53.9 7.6 63 57-131 2-64 (268)
71 4a2a_A Cell division protein F 94.6 0.12 4.2E-06 54.7 10.3 65 480-544 290-360 (419)
72 2ych_A Competence protein PILM 93.8 0.13 4.3E-06 53.6 8.1 63 482-544 274-338 (377)
73 3qbx_A Anhydro-N-acetylmuramic 93.6 0.22 7.5E-06 51.3 9.2 83 480-568 257-346 (371)
74 2ivn_A O-sialoglycoprotein end 93.5 0.2 6.9E-06 51.2 9.0 81 480-564 216-303 (330)
75 3eno_A Putative O-sialoglycopr 93.0 0.32 1.1E-05 49.8 9.4 81 481-566 222-310 (334)
76 4a2a_A Cell division protein F 92.7 0.18 6E-06 53.5 7.3 77 54-132 7-86 (419)
77 2ych_A Competence protein PILM 92.7 0.25 8.7E-06 51.2 8.4 70 55-131 13-85 (377)
78 2ivn_A O-sialoglycoprotein end 92.3 0.36 1.2E-05 49.3 8.9 74 56-131 2-76 (330)
79 3ttc_A HYPF, transcriptional r 92.2 0.45 1.6E-05 52.9 9.9 77 479-559 570-651 (657)
80 3eno_A Putative O-sialoglycopr 91.9 0.33 1.1E-05 49.7 8.0 81 52-134 3-84 (334)
81 3cqy_A Anhydro-N-acetylmuramic 91.8 0.38 1.3E-05 49.6 8.2 81 52-132 2-100 (370)
82 3vth_A Hydrogenase maturation 91.8 0.38 1.3E-05 54.6 8.8 76 480-560 665-748 (761)
83 4g9i_A Hydrogenase maturation 91.3 0.34 1.2E-05 55.2 7.9 81 480-564 677-764 (772)
84 2zgy_A Plasmid segregation pro 91.2 0.36 1.2E-05 49.0 7.3 69 483-557 247-319 (320)
85 3f9m_A Glucokinase; hexokinase 90.4 0.36 1.2E-05 51.5 6.5 72 56-130 78-154 (470)
86 3hm8_A Hexokinase-3; glucose, 89.5 0.9 3.1E-05 48.1 8.7 60 55-119 59-120 (445)
87 3ven_A O-carbamoyltransferase 88.8 0.8 2.7E-05 50.1 7.8 78 481-563 280-361 (576)
88 3en9_A Glycoprotease, O-sialog 87.9 1.4 4.8E-05 48.1 9.2 80 52-134 3-83 (540)
89 1vhx_A Putative holliday junct 86.3 1.5 5.1E-05 39.2 6.8 24 57-80 5-28 (150)
90 2f9w_A Pantothenate kinase; CO 85.4 1.7 6E-05 42.8 7.5 30 55-84 23-52 (271)
91 3t69_A Putative 2-dehydro-3-de 85.3 0.78 2.7E-05 46.5 5.0 45 513-558 259-303 (330)
92 3nuw_A 2-OXO-3-deoxygalactonat 84.7 0.86 3E-05 45.5 4.9 32 55-87 6-37 (295)
93 3r6m_A YEAZ, resuscitation pro 83.2 1.9 6.6E-05 40.9 6.5 64 57-134 4-67 (213)
94 1t6c_A Exopolyphosphatase; alp 83.0 1.3 4.6E-05 44.7 5.6 20 56-75 13-32 (315)
95 3cet_A Conserved archaeal prot 82.7 0.85 2.9E-05 46.2 3.9 31 57-88 2-32 (334)
96 4ijn_A Acetate kinase, acetoki 82.6 3.6 0.00012 42.6 8.6 46 489-535 300-347 (398)
97 1nbw_A Glycerol dehydratase re 82.0 2.3 7.8E-05 46.0 7.0 74 470-545 505-584 (607)
98 3bzc_A TEX; helix-turn-helix, 80.9 2.6 8.9E-05 47.8 7.5 63 54-131 328-391 (785)
99 2ews_A Pantothenate kinase; PA 80.7 1.2 4E-05 44.5 4.1 25 56-81 21-45 (287)
100 3mdq_A Exopolyphosphatase; str 78.8 4.7 0.00016 40.6 8.0 71 56-131 5-84 (315)
101 3sk3_A Acetate kinase, acetoki 78.3 2.4 8.2E-05 44.3 5.6 47 489-535 315-363 (415)
102 4ep4_A Crossover junction endo 77.4 7.7 0.00026 35.1 8.1 61 57-129 3-69 (166)
103 1u6z_A Exopolyphosphatase; alp 76.6 4.6 0.00016 43.7 7.6 74 55-131 11-91 (513)
104 2e2o_A Hexokinase; acetate and 76.1 5.8 0.0002 39.3 7.7 70 490-560 218-288 (299)
105 3r9p_A ACKA; ssgcid, seattle s 75.9 8.7 0.0003 39.6 8.9 46 489-535 291-338 (391)
106 4apw_A ALP12; actin-like prote 74.2 6.2 0.00021 39.9 7.5 66 490-558 256-323 (329)
107 3en9_A Glycoprotease, O-sialog 74.0 7.2 0.00025 42.4 8.4 60 480-544 220-283 (540)
108 4gni_A Putative heat shock pro 72.9 1.6 5.6E-05 45.6 2.8 22 55-77 13-34 (409)
109 2a6a_A Hypothetical protein TM 72.7 5.5 0.00019 37.9 6.2 64 56-133 13-76 (218)
110 3cer_A Possible exopolyphospha 72.4 4.4 0.00015 41.4 5.8 73 56-131 17-97 (343)
111 3cqy_A Anhydro-N-acetylmuramic 72.4 10 0.00034 39.0 8.4 75 480-561 264-344 (370)
112 2gel_A Putative GRAM negative 71.6 8.5 0.00029 36.8 7.3 64 56-133 2-65 (231)
113 2fsj_A Hypothetical protein TA 70.6 3 0.0001 42.6 4.1 65 490-557 273-342 (346)
114 1yuw_A Heat shock cognate 71 k 69.7 2.2 7.4E-05 46.8 2.9 25 52-77 1-25 (554)
115 3cj1_A Ectonucleoside triphosp 68.6 3.8 0.00013 43.6 4.4 59 54-114 33-99 (456)
116 2d0o_A DIOL dehydratase-reacti 68.5 11 0.00037 40.7 7.7 86 470-557 503-594 (610)
117 1hjr_A Holliday junction resol 68.2 14 0.00049 33.0 7.6 53 57-117 3-58 (158)
118 3qfu_A 78 kDa glucose-regulate 68.0 2.4 8.2E-05 43.9 2.7 22 55-77 18-39 (394)
119 3hi0_A Putative exopolyphospha 67.4 9.9 0.00034 41.0 7.5 72 55-131 15-95 (508)
120 1nu0_A Hypothetical protein YQ 66.0 12 0.00042 32.7 6.5 23 56-78 4-26 (138)
121 2ch5_A NAGK protein; transfera 65.5 17 0.00057 36.6 8.5 71 490-561 236-326 (347)
122 4htl_A Beta-glucoside kinase; 64.9 13 0.00046 36.7 7.5 70 490-560 216-292 (297)
123 3psf_A Transcription elongatio 63.6 6.8 0.00023 45.8 5.5 30 55-84 519-553 (1030)
124 3r8e_A Hypothetical sugar kina 62.7 14 0.00047 37.0 7.1 69 490-559 239-319 (321)
125 2aa4_A Mannac kinase, putative 60.2 13 0.00044 36.5 6.3 68 490-558 212-287 (289)
126 1iv0_A Hypothetical protein; r 59.3 12 0.00041 30.6 4.8 22 57-78 3-24 (98)
127 3o8m_A Hexokinase; rnaseh-like 58.9 18 0.0006 38.7 7.3 83 479-562 372-472 (485)
128 2e1z_A Propionate kinase; TDCD 58.9 26 0.00088 36.4 8.3 46 490-536 308-355 (415)
129 2fxu_A Alpha-actin-1, actin, a 57.9 5.6 0.00019 41.0 3.2 46 514-559 295-349 (375)
130 2gup_A ROK family protein; sug 57.5 25 0.00084 34.4 7.9 48 512-559 227-287 (292)
131 2yhw_A Bifunctional UDP-N-acet 56.5 33 0.0011 34.4 8.9 67 490-559 263-338 (343)
132 4db3_A Glcnac kinase, N-acetyl 56.4 12 0.00041 37.6 5.4 47 512-558 269-325 (327)
133 1dkg_D Molecular chaperone DNA 56.0 4.1 0.00014 42.0 1.8 21 56-77 3-23 (383)
134 2qm1_A Glucokinase; alpha-beta 55.6 19 0.00067 35.7 6.8 69 490-559 241-321 (326)
135 3vgl_A Glucokinase; ROK family 55.3 18 0.00061 36.2 6.5 71 490-561 231-314 (321)
136 2yhx_A Hexokinase B; transfera 54.7 35 0.0012 36.1 8.8 81 480-561 347-444 (457)
137 3aap_A Ectonucleoside triphosp 54.5 27 0.00092 35.6 7.7 19 55-73 3-21 (353)
138 3i33_A Heat shock-related 70 k 53.7 6 0.0002 41.0 2.6 21 56-77 24-44 (404)
139 1zbs_A Hypothetical protein PG 53.6 18 0.0006 35.7 6.0 70 489-563 213-284 (291)
140 2zgy_A Plasmid segregation pro 53.4 8.6 0.00029 38.5 3.7 23 57-79 2-24 (320)
141 4b9q_A Chaperone protein DNAK; 53.3 6.7 0.00023 43.4 3.1 18 56-73 3-20 (605)
142 3qbx_A Anhydro-N-acetylmuramic 53.1 17 0.00057 37.3 5.7 76 55-132 2-96 (371)
143 3psi_A Transcription elongatio 52.5 13 0.00046 44.1 5.6 30 55-84 516-550 (1219)
144 3htv_A D-allose kinase, alloki 52.4 50 0.0017 32.7 9.2 65 490-559 222-299 (310)
145 1xho_A Chorismate mutase; sout 51.9 16 0.00054 31.9 4.5 37 96-132 43-79 (148)
146 1sz2_A Glucokinase, glucose ki 50.1 27 0.00092 35.0 6.8 49 512-560 264-327 (332)
147 1saz_A Probable butyrate kinas 49.9 38 0.0013 34.7 8.1 69 490-558 272-347 (381)
148 3zx3_A Ectonucleoside triphosp 49.4 10 0.00034 40.2 3.5 60 54-115 33-100 (452)
149 4gib_A Beta-phosphoglucomutase 48.4 4.2 0.00015 38.9 0.4 21 59-79 10-38 (250)
150 4apw_A ALP12; actin-like prote 48.3 8.1 0.00028 39.0 2.6 23 50-72 2-24 (329)
151 1dbf_A Protein (chorismate mut 47.9 20 0.00067 30.7 4.4 37 96-132 14-50 (127)
152 2v7y_A Chaperone protein DNAK; 46.1 11 0.00036 40.7 3.1 19 56-74 3-21 (509)
153 1ufy_A Chorismate mutase; shik 45.8 25 0.00085 29.8 4.6 37 96-132 13-50 (122)
154 2hoe_A N-acetylglucosamine kin 44.7 47 0.0016 33.9 7.8 48 512-559 314-371 (380)
155 3d2f_A Heat shock protein homo 43.7 9.4 0.00032 42.8 2.3 18 57-74 4-21 (675)
156 2d0o_A DIOL dehydratase-reacti 42.7 42 0.0015 36.2 6.9 66 54-126 1-70 (610)
157 3khy_A Propionate kinase; csgi 41.2 29 0.00098 35.6 5.2 51 489-540 290-345 (384)
158 2kho_A Heat shock protein 70; 41.2 11 0.00039 41.5 2.5 20 56-76 3-22 (605)
159 1z6r_A MLC protein; transcript 40.7 63 0.0022 33.2 8.1 67 490-557 313-391 (406)
160 3vov_A Glucokinase, hexokinase 39.2 51 0.0017 32.5 6.8 70 490-560 216-296 (302)
161 1jce_A ROD shape-determining p 38.7 14 0.00046 37.3 2.5 20 56-76 4-23 (344)
162 1zc6_A Probable N-acetylglucos 38.4 22 0.00074 35.2 3.8 63 489-559 229-293 (305)
163 1z05_A Transcriptional regulat 38.3 70 0.0024 33.2 8.1 68 490-559 336-415 (429)
164 4h0p_A Acetate kinase; askha ( 38.2 31 0.0011 36.0 5.0 48 489-536 323-377 (438)
165 3js6_A Uncharacterized PARM pr 37.8 27 0.00093 35.6 4.6 45 512-559 290-336 (355)
166 3epq_A Putative fructokinase; 37.0 54 0.0018 32.4 6.5 52 297-365 89-142 (302)
167 1bdg_A Hexokinase; phosphotran 36.1 48 0.0016 35.0 6.3 47 515-561 395-448 (451)
168 2ap1_A Putative regulator prot 35.6 36 0.0012 33.9 5.0 46 512-557 269-324 (327)
169 1zxo_A Conserved hypothetical 35.5 9.8 0.00034 37.5 0.7 63 490-558 212-277 (291)
170 2iir_A Acetate kinase; transfe 32.5 34 0.0012 35.5 4.1 47 490-537 300-348 (403)
171 2q2r_A Glucokinase 1, putative 32.4 54 0.0018 33.3 5.9 69 490-559 283-371 (373)
172 1woq_A Inorganic polyphosphate 30.4 54 0.0018 31.5 5.2 46 512-559 214-261 (267)
173 1g99_A Acetate kinase; alpha/b 29.8 48 0.0017 34.3 4.8 46 490-536 300-347 (408)
174 3hm8_A Hexokinase-3; glucose, 28.5 56 0.0019 34.3 5.1 84 478-562 339-439 (445)
175 3f9m_A Glucokinase; hexokinase 27.1 40 0.0014 35.8 3.7 83 479-562 364-463 (470)
176 1nbw_A Glycerol dehydratase re 27.0 37 0.0013 36.8 3.4 59 54-119 1-62 (607)
177 2fsj_A Hypothetical protein TA 26.8 27 0.00093 35.3 2.3 22 56-79 22-43 (346)
178 1eik_A RNA polymerase subunit 25.8 56 0.0019 25.3 3.3 34 263-312 23-56 (77)
179 1k8k_A ARP3, actin-like protei 25.7 18 0.00061 37.6 0.7 47 513-559 316-387 (418)
180 4h0o_A Acetate kinase; askha ( 24.8 69 0.0024 33.0 4.8 46 489-535 303-350 (404)
181 3twe_A Alpha4H; unknown functi 24.5 1.1E+02 0.0038 17.7 3.5 21 594-614 4-24 (27)
182 1dw0_A Cytochrome C; asparagin 22.7 21 0.00073 29.9 0.5 33 191-223 78-111 (112)
183 3cet_A Conserved archaeal prot 22.5 1.5E+02 0.0052 29.7 6.7 68 482-556 246-321 (334)
184 2k48_A Nucleoprotein; viral pr 22.3 62 0.0021 26.4 3.0 40 579-618 63-102 (107)
185 2nu8_B SCS-beta, succinyl-COA 21.5 2.2E+02 0.0074 29.2 8.0 64 512-575 310-382 (388)
186 2ic6_A Nucleocapsid protein; h 20.7 73 0.0025 24.7 3.0 46 573-618 27-72 (78)
187 1hmj_A RPB5, protein (subunit 20.4 55 0.0019 25.4 2.3 35 261-311 19-53 (78)
188 3khy_A Propionate kinase; csgi 20.0 73 0.0025 32.6 3.8 28 56-83 3-31 (384)
No 1
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=3e-94 Score=805.21 Aligned_cols=537 Identities=48% Similarity=0.867 Sum_probs=460.0
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
++|+||||+|||++|++|||.+|++++..+.+++.. +.+||+||||++||+++++++++++++.++...+|.+|||++|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 83 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFDAT 83 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CcEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCHhHEEEEEEcCC
Confidence 469999999999999999999999999999999765 4899999999999999999999999887777789999999998
Q ss_pred ccc--ccCCCCeeeecCCCCCCccceeecccccHHHHHHHHccchhHHhhhCCCCCCCChHHHHHHHHHhCchhHhccce
Q 007076 133 CSL--VDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFR 210 (619)
Q Consensus 133 ~~~--vd~~G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~ 210 (619)
+++ ||++|+|++....+++.+|+|+|+|.|+.++++++++..++++++||+++++.|+++||+|+++|+||+|+++.+
T Consensus 84 ~~~v~~D~~G~pl~~~~~~~~~~~ai~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~~~~~Kl~Wl~~~~Pe~~~~~~~ 163 (554)
T 3l0q_A 84 CSLVVLDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATKHPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNVGH 163 (554)
T ss_dssp SCEEEEETTSCBCCCSTTCCTTCCEECTTCCTTHHHHHHHHHHTCGGGGGBTTCCCTTSHHHHHHHHHHHCHHHHHHEEE
T ss_pred CceEEECCCCCEeeccCCCCCCCCcEEecccchHHHHHHHHHhHHHHHHHhCCCCChhhHHHHHHHHHHhChHHHHHhce
Confidence 764 499999994222344456999999999999999998776788999999999999999999999999999999999
Q ss_pred eeechhHHHhhhcCCcccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccccCcccccCC
Q 007076 211 WMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAFPG 290 (619)
Q Consensus 211 ~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~l~~~v~~~g 290 (619)
|++++|||.|+|||+...+++|.++. ..||+++++||+++|+.+||++.+...+.+|++++++++
T Consensus 164 ~~~~~dyl~~~LTG~~~~s~as~t~~---------------~~~d~~~~~W~~~ll~~~gi~~~~~~~~~~Lp~~i~~~~ 228 (554)
T 3l0q_A 164 LFDLPDFLTWRATKDETRSLCSTVCK---------------WTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMG 228 (554)
T ss_dssp EEEHHHHHHHHHHSCCCEEHHHHHHH---------------SCCBTTTTBCCHHHHHHHTCGGGGHHHHTTTCSCEECTT
T ss_pred EEcHHHHHHHHHhCCccccccchhhc---------------cccccccCCCCHHHHHHcCCccccchhHHhCCCcccCCc
Confidence 99999999999999986555443221 136889999999999999998632100003333588999
Q ss_pred CccC-CCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccC-CCcchhhhhhhhhcccCeEEEEecccceeeeeecccc
Q 007076 291 HPLG-SGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESV-PESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKL 368 (619)
Q Consensus 291 ~~~G-~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~-~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~~~~~~~~ 368 (619)
+++| + |++++|+++||++||||++|++|++|+++|+.|.. ++|. . ....+++.+++|||+++..++++|.
T Consensus 229 ~~~G~~-lt~~~A~~~GL~~g~pV~~g~gD~~aa~lg~~G~~~~~G~---~----~~~~~~~~~~~GTs~~~~~~~~~~~ 300 (554)
T 3l0q_A 229 APLGHG-LSQRAASEMGLIPGTAVSVSIIDAHAGTIGILGASGVTGE---N----ANFDRRIALIGGTSTAHMAMSRSAH 300 (554)
T ss_dssp CBCTTS-SCHHHHHHHTCCTTCEEBCCEEHHHHHHHHHTTCCCTTSC---C----CCTTTEEEEECSSSEEEEEEESSCC
T ss_pred CeeCcc-cCHHHHHHhCCCCCCeEEEeChHHHhHHhhccccccCCCc---c----ccccceEEEEecchheeeeecCCcc
Confidence 9999 8 99999999999999999999999999999853433 3320 0 0001278899999999999999888
Q ss_pred ccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhccCCCCccCCCC
Q 007076 369 FIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTE 448 (619)
Q Consensus 369 ~~~~~~~~~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~ 448 (619)
.+++.|.+++++..++.|+++++++++|.+++||++.+....++.+.++..+.+.|+.|+++++++++. .|..+.+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~ 378 (554)
T 3l0q_A 301 FISGIWGPYYSAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGE--PENIAFLTN 378 (554)
T ss_dssp CCTTSEEEEETSSSTTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHSS--GGGGGGGGT
T ss_pred ccCCcceeecccccCCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCCC--CCccccccC
Confidence 778777666666678999999999999999999999875433444445455778999999888776432 110012379
Q ss_pred ceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHH
Q 007076 449 DIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLF 528 (619)
Q Consensus 449 gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~ 528 (619)
|++|+|||.|+|+|+|||++||+|+|++.+|++.|++|++||++|||||++|++++.|++.|.++++|+++||++||++|
T Consensus 379 gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~ 458 (554)
T 3l0q_A 379 DIHMLPYFHGNRSPRANPNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIF 458 (554)
T ss_dssp TCCEECCTTCBCSSSCBTTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHH
T ss_pred ceEEcccccCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHH
Confidence 99999999999999999999999999999999999988899999999999999999999988899999999999999999
Q ss_pred HHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHHHHHHHHHHHHHH
Q 007076 529 LQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFEQQV 608 (619)
Q Consensus 529 ~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~~~~ 608 (619)
+||+||+||+||+++...|++|+|||++|++++|.|+|++++.+++++..++|+|+ |+++++.|+++|++|+++|++++
T Consensus 459 ~Qi~ADv~g~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~a~~~~~~~~~~~~P~-~~~~~~~Y~~~y~~y~~l~~~~~ 537 (554)
T 3l0q_A 459 VQEHANATGCAMLLPEESEAMLLGSAMMGTVAAGVFESLPEAMAAMSRIGKTVTPQ-TNKIKAYYDRKYRVFHQMYHDHM 537 (554)
T ss_dssp HHHHHHHHCCEEEEESCSCHHHHHHHHHHHHHTTSSSSHHHHHHHHCCEEEEECCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCeEEecCCCcchHHHHHHHHHHHcCCcCCHHHHHHHhcCCCcEEeCC-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988898888999993 47899999999999999999999
Q ss_pred HHHHHHHH
Q 007076 609 SQRSIMAQ 616 (619)
Q Consensus 609 ~~~~~~~~ 616 (619)
++|++|+.
T Consensus 538 ~~~~~~~~ 545 (554)
T 3l0q_A 538 RYQALMQE 545 (554)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHhc
Confidence 99999964
No 2
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=1.4e-91 Score=774.50 Aligned_cols=485 Identities=20% Similarity=0.314 Sum_probs=427.6
Q ss_pred CCCCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007076 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (619)
Q Consensus 52 m~~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (619)
|+|+|+||||+|||++|++|+|.+|++++..+.+++.. +.+||+||||++||+++++++++++++.+ .+|.+|||+
T Consensus 1 M~m~~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~---~~I~~Igis 77 (504)
T 3ll3_A 1 MSLKYIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKIAAISWS 77 (504)
T ss_dssp -CCEEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS---SEEEEEEEE
T ss_pred CCCCEEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC---CCeEEEEEE
Confidence 66789999999999999999999999999999999865 48999999999999999999999988753 689999999
Q ss_pred Cc-ccc--ccCCCCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCchhH
Q 007076 131 AT-CSL--VDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESW 205 (619)
Q Consensus 131 ~~-~~~--vd~~G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~ 205 (619)
+| +++ ||++|+|+ +|+|+|+|.|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|
T Consensus 78 ~q~~~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~ 148 (504)
T 3ll3_A 78 SQMHSLIGLGSDDELL---------TNSITWADNCAKSIVQDAKNRGFAQQIYRKTGMPMHPMAPIYKLLWLKNKKTEVF 148 (504)
T ss_dssp ECSSCBEEECTTSCBS---------SCEECTTCCTTHHHHHHHHHHTHHHHHHHHHCCCSCTTSHHHHHHHHHHHCHHHH
T ss_pred CCCCcEEEECCCCCCc---------ccceeCCccCHHHHHHHHHhccCHHHHHHHHCCCCCcccHHHHHHHHHHcChHHH
Confidence 98 664 49999999 8999999999999999998864 6789999999999999999999999999999
Q ss_pred hccceeeechhHHHhhhcCCcccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccccCcc
Q 007076 206 SMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRS 285 (619)
Q Consensus 206 ~~~~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~l~~~ 285 (619)
+++.+|++++|||.|+|||+.. ++.|+ +++|++||+++++||+++|+.+||++.+ || +
T Consensus 149 ~~~~~~~~~~dyl~~~LTG~~~-~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP----~ 206 (504)
T 3ll3_A 149 SQAQKWIGIKEYIIFRLTGKLV-TDTTM--------------AAGTGILNLKTLTWDQELLDILKIKKEQ---LP----K 206 (504)
T ss_dssp HHCCEEECHHHHHHHHHHSCCE-EEHHH--------------HTTTTCBCTTTSSBCHHHHHHHTCCGGG---SC----E
T ss_pred HHHhheeCHHHHHHHHHhCCcc-cchhH--------------hhcccCeeCCCCCcCHHHHHHcCCCHHH---CC----C
Confidence 9999999999999999999874 34443 5678899999999999999999999753 46 6
Q ss_pred cccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccceeeeeec
Q 007076 286 VAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSR 365 (619)
Q Consensus 286 v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~~~~~ 365 (619)
++++++++|. |++++|+++||++||||++|+||++|+++|+ |+.++ +++.+++|||+++.+.++
T Consensus 207 i~~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~~~~~ 270 (504)
T 3ll3_A 207 IAQPTKVIFP-IKTEYVKKLGIDSDTKIILGASDGYLSTIGV-NAIDS--------------DHCALNVGTSGAIRTIVD 270 (504)
T ss_dssp EECTTCEECC-CCHHHHHHHTCCTTCEEEEEEEHHHHHHHTT-TCCST--------------TEEEEEESSSEEEEEEES
T ss_pred eeCCcceeec-cCHHHHHhcCCCcCCCEEEEccHHHHHHHhC-CCCCC--------------CcEEEEechhhhheeeCC
Confidence 8899999997 9999999999999999999999999999998 55543 689999999999999999
Q ss_pred cccccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhccCCCCccC
Q 007076 366 NKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAA 445 (619)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~ 445 (619)
+|..++.... +++...++.|+++++++++|.+++|+++.+.... ..++.+.+++++ + |+
T Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~-----------~~~~~~~~~a~~------~---~~ 329 (504)
T 3ll3_A 271 QPKIDPSASY-FCYPADKTHYLLGGPVNNGGIVFNWARQTLFDAD-----------ETPQDFLDVAQT------A---PA 329 (504)
T ss_dssp SCCCCTTCCS-EEEEEETTEEEEEEEESCSHHHHHHHHHHHTCTT-----------CCHHHHHHHHHT------S---CT
T ss_pred CcccCCCCce-EEEEeCCCeEEEEeehhhHHHHHHHHHHHhccch-----------hHHHHHHHHHhc------C---CC
Confidence 8876654321 3332336789999999999999999999875321 112222223333 2 36
Q ss_pred CCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCC
Q 007076 446 LTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN 525 (619)
Q Consensus 446 g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s 525 (619)
+++|++|+|||.|+|+|+||+++||+|+|++..|++.|+. ||++||+||++|++++.|++.+.++++|+++||++||
T Consensus 330 g~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~---RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s 406 (504)
T 3ll3_A 330 GSRNLIFLPYLGGERAPIWDANARGSFVGLTRMHQKPEMA---RAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKS 406 (504)
T ss_dssp TGGGCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHH---HHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCS
T ss_pred CCCCeEEecCccCCCCCCCCCccCeEEECCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcC
Confidence 8999999999999999999999999999999999999865 5999999999999999999888889999999999999
Q ss_pred HHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHHHHHHHHHHH
Q 007076 526 PLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFE 605 (619)
Q Consensus 526 ~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~ 605 (619)
++|+||+||++|+||+++...|++|+|||++|++++|.|+++++ ++++.+..++|+| +++.++.|+++|++|+++|+
T Consensus 407 ~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~-~~~~~~~~~~~~P--~~~~~~~Y~~~y~~y~~l~~ 483 (504)
T 3ll3_A 407 DFVRQLCANIFNVPIVTMKEQQSGTLAAMFLARQALGLNQDLSE-IGQFAQADKVYFP--NPKEAATYQKLFPLYCEIRN 483 (504)
T ss_dssp HHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSCCSGGG-GGGTSCEEEEECC--CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCeEEecCCCCchhHHHHHHHHHHcCccCCHHH-HHHhcCCCeEEcc--CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987 5667777889999 99999999999999999999
Q ss_pred HHHHHHHH
Q 007076 606 QQVSQRSI 613 (619)
Q Consensus 606 ~~~~~~~~ 613 (619)
+++++.+-
T Consensus 484 ~l~~~~~~ 491 (504)
T 3ll3_A 484 ALAASYGK 491 (504)
T ss_dssp HHGGGSGG
T ss_pred HHHHHHHH
Confidence 99875433
No 3
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=6.5e-91 Score=770.02 Aligned_cols=484 Identities=20% Similarity=0.271 Sum_probs=429.3
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
++|+||||+|||++|++|||++|+++++.+++++.. +.+||.||||++||+++++++++++++.+++..+|.+|||++|
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis~~ 85 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDWRPGGICVTGM 85 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEEEC
T ss_pred CCEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCChhheEEEEEECC
Confidence 479999999999999999999999999999999865 4899999999999999999999999887766789999999998
Q ss_pred -ccc--ccCCCCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCchhHhc
Q 007076 133 -CSL--VDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 207 (619)
Q Consensus 133 -~~~--vd~~G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 207 (619)
+++ ||++|+|+ +|+|+|+|.|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|++
T Consensus 86 ~~~~v~~D~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 156 (508)
T 3ifr_A 86 LPAVVLLDDRGAVL---------RPSIQQSDGRCGDEVAELRAEVDSEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGA 156 (508)
T ss_dssp SSCBEEECTTSCBC---------SCEECTTCCCCHHHHHHHHHHSCHHHHHHHHSSCSSTTSHHHHHHHHHHHCHHHHHT
T ss_pred CCcEEEECCCCCCc---------ccceeccccChHHHHHHHHhhccHHHHHHHHCCCCChhhHHHHHHHHHHcCHHHHHH
Confidence 554 49999999 8999999999999999998874 678999999999999999999999999999999
Q ss_pred cceeeechhHHHhhhcCCcccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccccCcccc
Q 007076 208 VFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVA 287 (619)
Q Consensus 208 ~~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~l~~~v~ 287 (619)
+.+|++++|||.|+|||+.. ++.|+ +++|++||+++++||+++|+.+|||..+ || +++
T Consensus 157 ~~~~l~~~dyl~~~LTG~~~-~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP----~i~ 214 (508)
T 3ifr_A 157 IATVCGSYDYINMLLTGERV-VDRNW--------------ALEGGFIDLASGTVEADLVALAHIPPSA---VP----PAH 214 (508)
T ss_dssp CSEEECHHHHHHHHHHCCCC-EEHHH--------------HHHHTCEETTTTEECHHHHHTTTSCGGG---SC----CEE
T ss_pred HhhhcCchHHHHHHhcCCcc-ccHhH--------------hhcccCccCccCCCCHHHHHHcCCCHHH---CC----CCc
Confidence 99999999999999999874 34443 5578899999999999999999999753 46 688
Q ss_pred cCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccceeeeeeccc
Q 007076 288 FPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNK 367 (619)
Q Consensus 288 ~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~~~~~~~ 367 (619)
++++++|. |++++|+++||++|+||++|++|++|+++|+ ++.++ +++.+++|||+++.+.++++
T Consensus 215 ~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~~~~~~~ 278 (508)
T 3ifr_A 215 PTHRVLGA-VTAEAAALTGLPTGLPVYGGAADHIASALAA-GITRP--------------GDVLLKFGGAGDIIVASATA 278 (508)
T ss_dssp CTTSEEEE-CCHHHHHHHCCCTTCEEECCEEHHHHHHHHT-TCCST--------------TEEEEEESSSEEEEECBSCC
T ss_pred CCCCeeec-cCHHHHHHhCCCCCCeEEEECchHHHHHHhC-CCCCC--------------CcEEEEechhhhheeeCCCc
Confidence 99999997 9999999999999999999999999999998 55543 68999999999999999988
Q ss_pred cccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCC-HHHHHHHHHHhhhhccCCCCccCC
Q 007076 368 LFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVS-LFELLNGTLESMIHERNSPFVAAL 446 (619)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~-~~~~l~~~~~~~~~~~~~p~~~~g 446 (619)
..++.. ..+ ++..++.|+++++++++|.+++|+++.+.. .+.+ .|+++++++++. +++
T Consensus 279 ~~~~~~-~~~-~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~----------~~~~~~~~~l~~~a~~~---------~~~ 337 (508)
T 3ifr_A 279 KSDPRL-YLD-YHLVPGLYAPNGCMAATGSALNWLAKLLAP----------EAGEAAHAQLDALAAEV---------PAG 337 (508)
T ss_dssp CCBTTB-BCC-BCSSTTCBCCEEEESSSHHHHHHHHHHHST----------TCTTHHHHHHHHHHHTS---------CTT
T ss_pred ccCCCc-cee-eeecCCceEEechhhhhHHHHHHHHHHHhh----------cCCCCCHHHHHHHHhcC---------CCC
Confidence 776663 233 345588999999999999999999998731 0111 477888777652 358
Q ss_pred CCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCH
Q 007076 447 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNP 526 (619)
Q Consensus 447 ~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~ 526 (619)
++|++|+|||+|+|+|+||+++||+|+|++..|++.|+ +||++||+||++|++++.|++.|.++++|+++||++||+
T Consensus 338 ~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~s~ 414 (508)
T 3ifr_A 338 ADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHL---WRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSR 414 (508)
T ss_dssp GGGCEEECCTTCCC----CCCCCCEEESCCTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGGCH
T ss_pred CCCeEEecCCCCCCCCCCCCCcCEEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcccCH
Confidence 99999999999999999999999999999999999986 569999999999999999998888999999999999999
Q ss_pred HHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHHHHHHHHHHHH
Q 007076 527 LFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFEQ 606 (619)
Q Consensus 527 ~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~~ 606 (619)
+|+||+||++|+||+++...|++|+|||++|++++|.|+|++++. ++.+..++|+| +++.++.|+++|++|+++|++
T Consensus 415 ~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~-~~~~~~~~~~P--~~~~~~~y~~~y~~~~~~~~~ 491 (508)
T 3ifr_A 415 VWMGIMADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVT-ALVRTGEKITP--DPAKAEVYDRLYRDFSALYAT 491 (508)
T ss_dssp HHHHHHHHHHTSCEEEEECCSTHHHHHHHHHHHHTCSSCCGGGGG-GGSEEEEEECC--CGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEecCCCCchHHHHHHHHHHHhCCCCCHHHHH-hhcCCCeEECc--CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998864 47778889999 999999999999999999999
Q ss_pred HHHHH
Q 007076 607 QVSQR 611 (619)
Q Consensus 607 ~~~~~ 611 (619)
+++..
T Consensus 492 ~~~~~ 496 (508)
T 3ifr_A 492 LHPFF 496 (508)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98754
No 4
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=9.8e-91 Score=769.10 Aligned_cols=485 Identities=21% Similarity=0.295 Sum_probs=428.1
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
|+|+||||+|||++|++|+|.+|+++...+.+++.. +.+||+||||++||+++++++++++ +.++...+|.+|||++|
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~~~I~~Igis~q 82 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQ 82 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCGGGEEEEEEEEC
T ss_pred ccEEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCChhHeEEEEEecc
Confidence 479999999999999999999999999999999865 4899999999999999999999998 66666788999999998
Q ss_pred -ccc--ccCCCCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCchhHhc
Q 007076 133 -CSL--VDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 207 (619)
Q Consensus 133 -~~~--vd~~G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 207 (619)
+++ ||++|+|+ +|+|+|+|.|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|++
T Consensus 83 ~~~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 153 (511)
T 3hz6_A 83 MQNFLPLDQDHEPL---------HRAVLYSDKRPLKEAEEINARHGADNLWSALENPMTAASILPKLVFWRASFPQAFGR 153 (511)
T ss_dssp CSCBEEECTTSCBS---------SCEECTTCCCCHHHHHHHHHHHCHHHHHHHHSSCCSTTSHHHHHHHHHHHCHHHHTT
T ss_pred cccEEEECCCcCCC---------cCceecCCCCHHHHHHHHHhccCHHHHHHHHCCCCCchhHHHHHHHHHHhChHHHHH
Confidence 664 49999999 8999999999999999998764 678999999999999999999999999999999
Q ss_pred cceeee-chhHHHhhhcCCcccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccccCccc
Q 007076 208 VFRWMD-LSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSV 286 (619)
Q Consensus 208 ~~~~~~-~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~l~~~v 286 (619)
+.+|++ ++|||.|+|||+.. ++.|+ ||+|++||+++++||+++|+.+||++.+ || ++
T Consensus 154 ~~~~l~~~~dyl~~~LTG~~~-~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP----~i 211 (511)
T 3hz6_A 154 LRHVVLGAKDYVVLRLTGRHA-TDRTN--------------ASTTGLYRPKDDAWHVELLADYGFSLDL---MP----RL 211 (511)
T ss_dssp CCEEECSHHHHHHHHHHSCCE-ECHHH--------------HHHTTCEETTTTEECHHHHHHTTCCGGG---SC----EE
T ss_pred HHHHhcCcHHHHHHHHhCCce-eeHhH--------------hhcccceeCCCCCcCHHHHHHhCCCHHH---CC----CC
Confidence 999999 99999999999874 34443 5678899999999999999999999753 46 68
Q ss_pred ccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccceeeeeec-
Q 007076 287 AFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSR- 365 (619)
Q Consensus 287 ~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~~~~~- 365 (619)
+++++++|. |++++|+++||++||||++|++|++|+++|+ ++.++ +++.+++|||+++.+.++
T Consensus 212 ~~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~~~~~~ 275 (511)
T 3hz6_A 212 LEPGEQVGG-VSALAARQTGFVSGTPVLCGLGDAGAATLGV-GVLDD--------------EDAYLHLGTTGWLARLTQT 275 (511)
T ss_dssp CCTTSEEEE-CCHHHHHHHCCCTTCEEECCEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEEEEEEC
T ss_pred cCCCCcccc-cCHHHHHhhCCCCCCeEEEECchHHHHHHhC-CCCCC--------------CcEEEEecchhhheeecCC
Confidence 899999997 9999999999999999999999999999998 55543 689999999999999998
Q ss_pred ccccc-CCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhccCCCCcc
Q 007076 366 NKLFI-PGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVA 444 (619)
Q Consensus 366 ~~~~~-~~~~~~~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~ 444 (619)
+|..+ +......+.+..++.|..+++++++|.+++|+++.+... ....|+++++++++.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~----------~~~~~~~l~~~a~~~~--------- 336 (511)
T 3hz6_A 276 DPVGDMPVGTIFRLAGIIAGKTLQVAPVLNAGNILQWALTLVGHR----------PGEDCAEYFHMAAAEV--------- 336 (511)
T ss_dssp CCCCSCCSSCCEEECSSSTTEEEEEEEESSSHHHHHHHGGGGTCC----------TTSCSHHHHHHHHHHH---------
T ss_pred eecccCCCCceEEEEEecCCceEEEeehhhHHHHHHHHHHHhccc----------ccccHHHHHHHHHhCC---------
Confidence 88766 543222223455777666699999999999999887410 0135788888877643
Q ss_pred CC---CCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecC
Q 007076 445 AL---TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGG 521 (619)
Q Consensus 445 ~g---~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG 521 (619)
++ ++|++|+|||+|+|+|+||+++||+|+|++..|++.|+. ||++||+||++|++++.|++ |. +++|+++||
T Consensus 337 ~g~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~---RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GG 411 (511)
T 3hz6_A 337 QGVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQIL---LAVLEGAALSLRWCAELLGM-EK-VGLLKVVGG 411 (511)
T ss_dssp TTCCCCTTCEEEEESSCBCSSSCBSSCEEEEECCCTTCCHHHHH---HHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESG
T ss_pred CCCCCCCCEEEeCCCCCCCCCCCCCccceEEEcCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCc
Confidence 46 899999999999999999999999999999999999865 59999999999999999998 88 999999999
Q ss_pred CcCCHHHHHHHHhhhCCce-eecCCCCccchHHHHHHHhhccccCCHHHHHHHh---hcCCeEEcCCCChhhHHHHHHHH
Q 007076 522 LAKNPLFLQQHADIIGCPI-ILPRENESVLLGAAILGAVAAKRYSSLIEAMKAM---NAAGQVIHPSKDPKVKKYHDAKY 597 (619)
Q Consensus 522 ~a~s~~~~Qi~Advlg~pV-~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~---~~~~~~~~P~~~~~~~~~y~~~y 597 (619)
++||++|+||+||++|+|| +++...|++|+|||++|++++|.|++++++.+++ .+..++|+| +++.++.|+++|
T Consensus 412 ga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~~~y~~~y 489 (511)
T 3hz6_A 412 GARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADLREPASNILHP--QPCDEGRRRRKF 489 (511)
T ss_dssp GGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHHHHHTTSCSCHHHHHHHHHTC---CCCBCC--CCCCHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHHHHHhCCcCCHHHHHHHhhccCCCCeEECc--CHHHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999998888888 788889999 899999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 007076 598 LIFRELFEQQVSQRS 612 (619)
Q Consensus 598 ~~y~~l~~~~~~~~~ 612 (619)
++|+++|++++++.+
T Consensus 490 ~~~~~~~~~l~~~~~ 504 (511)
T 3hz6_A 490 ERFKQCVETLGRLDE 504 (511)
T ss_dssp HHHHHHHHHHTC---
T ss_pred HHHHHHHHHHhhhcc
Confidence 999999999987654
No 5
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=6.4e-89 Score=764.43 Aligned_cols=505 Identities=26% Similarity=0.443 Sum_probs=433.0
Q ss_pred CCeEEEEEcCCcceEEEEEcC-CCCEEEEEEeecc-----cc-cC------CCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 007076 54 RSVFLGVDVGTGSARAGLFDE-SGKLLGSASSPIQ-----IW-KE------GDCIEQSSTDIWHAICAAVDSACSLANVD 120 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~-~g~il~~~~~~~~-----~~-~~------~g~~e~dp~~~~~~~~~~l~~~~~~~~~~ 120 (619)
++|+||||+|||++|++|||. +|+++.+.+++++ .. ++ +||+||||++||+++++++++++++.++.
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~~~ 83 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESGVD 83 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC---C
T ss_pred CCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCC
Confidence 469999999999999999997 9999999999987 32 35 89999999999999999999999887777
Q ss_pred CCCEEEEEEcCc-ccc--ccCCCCeeeecCC--CCCCccceeecccccHHHHHHHHcc----chhHHhhhCCCCCCCChH
Q 007076 121 GEEVKGVGFAAT-CSL--VDADGSPVSVSWN--GDSRRNIIVWMDHRAVKQAEKINSR----NSPVLQYCGGAVSPEMQP 191 (619)
Q Consensus 121 ~~~I~aIgis~~-~~~--vd~~G~pl~~~~~--~~~~~p~i~W~D~R~~~~~~~l~~~----~~~~~~~tG~~~~~~~~~ 191 (619)
+.+|.+|||++| +++ ||++|+|+.+..+ +.+..++|+|+|.|+.++++++++. .+.++++||+++++.|++
T Consensus 84 ~~~I~~Igis~q~~~~v~~D~~G~pl~~~~~~~~~p~~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~~tG~~~~~~~~~ 163 (572)
T 3jvp_A 84 ADDVIGIGVDFTACTMLPVDEEGQPLCLLAQYKDNPHSWVKLWKHHAAQDKANAINEMAEKRGEAFLPRYGGKISSEWMI 163 (572)
T ss_dssp CSCEEEEEEEECSSCEEEECTTSCBGGGSSSTTSSGGGSEECTTCCTTHHHHHHHHHHHHHHTCTTGGGGTTCCCSSSHH
T ss_pred hhHEEEEEEecCCCcEEEECCCCCCCccCccccccccccceecCccchHHHHHHHHHhccccHHHHHHHhCCCCCchhHH
Confidence 789999999998 664 4999999953211 1222338999999999999999775 257889999999999999
Q ss_pred HHHHHHHHhCchhHhccceeeechhHHHhhhcCCcccccccccccccccccchhhccccccccCCcCCCC-CHHHHHHcC
Q 007076 192 PKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGW-DDEFWEEIG 270 (619)
Q Consensus 192 ~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W-~~~ll~~~g 270 (619)
+||+|+++|+||+|+++.+|++++|||.|+|||+.. ++.|+ +++|++|| ++++| |+++|+.+|
T Consensus 164 ~kl~wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~--------------As~t~l~d-~~~~W~~~ell~~~g 227 (572)
T 3jvp_A 164 AKVWQILDEAEDVYNRTDQFLEATDWIVSQMTGKIV-KNSCT--------------AGYKAIWH-KREGYPSNEFFKALD 227 (572)
T ss_dssp HHHHHHHHHHHHHHHHCSEEEEHHHHHHHHHHSSCC-EEHHH--------------HHHHSCCB-TTTBSCCHHHHHTTC
T ss_pred HHHHHHHHhCHHHHHHhheEecHHHHHHHHhcCCce-eehhh--------------ccccceeC-CCCCcCCHHHHHHhC
Confidence 999999999999999999999999999999999875 33333 55788999 99999 999999998
Q ss_pred CCcc-c-cccccccCcccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccC
Q 007076 271 LGDL-I-DGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICH 348 (619)
Q Consensus 271 i~~~-l-~~~lp~l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~ 348 (619)
++.. + ...| +|+++++++++|. |++++|+++||++|+||++|++|++|+++|+ |+..+ +
T Consensus 228 ~~l~~i~~~~L---~p~i~~~~~~~G~-l~~~~A~~~GL~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g 288 (572)
T 3jvp_A 228 PRLEHLTTTKL---RGDIVPLGERAGG-LLPEMAEKMGLNPGIAVAVGNVDAHAAVPAV-GVTTP--------------G 288 (572)
T ss_dssp GGGTTSTTTTT---CSCEECTTSEEEE-CCHHHHHHHTSCTTCEEECCEETTTTHHHHT-TCCSS--------------E
T ss_pred cccccCCHhHC---CCccCCcCccccc-cCHHHHHHhCCCCCCeEEEeCchHHHHHhhC-CCCCC--------------C
Confidence 4210 0 1122 2378999999997 9999999999999999999999999999998 55544 5
Q ss_pred eEEEEecccceeeeeeccccccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHH
Q 007076 349 RMVLVCGTSTCHMAVSRNKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLN 428 (619)
Q Consensus 349 ~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~ 428 (619)
++.+++|||+++..+++.+...++.+..+..+..++.|.++++++++|.+++||+++++.. +..+.++..+.+.|++++
T Consensus 289 ~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~-~~~~~~~~~g~~~~~~l~ 367 (572)
T 3jvp_A 289 KLVMAMGTSICHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGVSA-ATFDEAQEKGVNVHALLE 367 (572)
T ss_dssp EEEEEESSSEEEEEEESSCCCCTTCSEEEETSSSTTSEEEEEEESCSHHHHHHHHHHTSBH-HHHHHHHHTTBCHHHHHH
T ss_pred cEEEEecchhheeeecCCCccCCCceeeccCccCCCcEEEeehhhhHHHHHHHHHHhccch-hhHHHHHhcCCCHHHHHH
Confidence 8999999999988888876655554433333456889999999999999999999998642 233344445677899998
Q ss_pred HHHHhhhhccCCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007076 429 GTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA 508 (619)
Q Consensus 429 ~~~~~~~~~~~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~ 508 (619)
+++++. +++++|++|+|||.|+|+|+|||++||+|+|++..|++.|+ +||++|||||++|++++.|++
T Consensus 368 ~~a~~~---------~~g~~gl~~lP~~~Ger~P~~d~~arg~~~Gl~~~~t~~~l---~RAvlEgia~~~r~~~~~l~~ 435 (572)
T 3jvp_A 368 EKASQL---------RPGESGLLALDWWNGNRSILVDTELSGMLLGYTLQTKPEEI---YRALLEATAFGTRAIVDAFHG 435 (572)
T ss_dssp HHHTSS---------CTTSSCCEEECCTTCCCTTTCCSSCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhC---------CCCCCCeEeCCccCCCCCCCCCCCcCEEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 887653 36899999999999999999999999999999999999986 569999999999999999998
Q ss_pred CCCCcCEEEEecCCc-CCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhcc----ccCCHHHHHHHhhcC-CeEEc
Q 007076 509 HGHKIDTLLACGGLA-KNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAK----RYSSLIEAMKAMNAA-GQVIH 582 (619)
Q Consensus 509 ~g~~~~~I~~~GG~a-~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G----~~~~~~~a~~~~~~~-~~~~~ 582 (619)
.|.++++|+++||++ ||++|+||+||++|+||+++...|++|+|||++|++++| .|++++|+.+.+... .++|+
T Consensus 436 ~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~e~~~~~~~~~~~~~~ 515 (572)
T 3jvp_A 436 RGVEVHELYACGGLPQKNHLLMQIFADVTNREIKVAASKQTPALGAAMFASVAAGSEVGGYDSIEEAAKKMGRVKDETFK 515 (572)
T ss_dssp TTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEBCCSSHHHHHHHHHHHHHHCSSSSSCSCHHHHHHHHCCBCSCCBC
T ss_pred cCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEecCCCccHHHHHHHHHHHhcCCCccccCCHHHHHHHhhccCCeEEe
Confidence 888999999999999 999999999999999999999999999999999999999 999999998888754 57899
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHH
Q 007076 583 PSKDPKVKKYHDAKYLIFRELFEQQV 608 (619)
Q Consensus 583 P~~~~~~~~~y~~~y~~y~~l~~~~~ 608 (619)
| ++++++.|+++|++|+++|++++
T Consensus 516 P--~~~~~~~Y~~~y~~y~~l~~~l~ 539 (572)
T 3jvp_A 516 P--IPEHVAIYEKLYQEYVTLHDYFG 539 (572)
T ss_dssp C--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred e--CHHHHHHHHHHHHHHHHHHHHHh
Confidence 9 99999999999999999999986
No 6
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.8e-86 Score=733.43 Aligned_cols=478 Identities=19% Similarity=0.319 Sum_probs=407.9
Q ss_pred CCCCCCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 007076 50 PARSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVG 128 (619)
Q Consensus 50 ~~m~~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIg 128 (619)
++||++|+||||+|||++|++++|.+|+++...+.+++.. +.+||.||||++||+++++++++++++.++.+.+|.+||
T Consensus 21 ~~MM~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Ig 100 (520)
T 4e1j_A 21 QSMMGGYILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITANDIAAIG 100 (520)
T ss_dssp CCCCSCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEE
T ss_pred HHHhhCeEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEE
Confidence 5577789999999999999999999999999999999754 589999999999999999999999988776678999999
Q ss_pred EcCc-ccc--cc-CCCCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCc
Q 007076 129 FAAT-CSL--VD-ADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQ 202 (619)
Q Consensus 129 is~~-~~~--vd-~~G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~p 202 (619)
|++| +++ || ++|+|+ +|+|.|+|.|+.++++++++.. ++++++||+++++.++++||+|+++|+|
T Consensus 101 is~~g~~~v~~D~~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~P 171 (520)
T 4e1j_A 101 ITNQRETVVVWDRETGKPI---------HNAIVWQDRRTAAFCDKLKKKGLEKTFVKKTGLLLDPYFSGTKLNWLLSNVK 171 (520)
T ss_dssp EEECSSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSSCSSTTSHHHHHHHHHHHST
T ss_pred EeCCcceEEEEECCCCeEC---------ccccccccCCHHHHHHHHHhcccHHHHHHHHCCCCCchhHHHHHHHHHHcCh
Confidence 9998 554 59 579999 8999999999999999998874 6789999999999999999999999999
Q ss_pred hhHhccce----eeechhHHHhhhcCCc-ccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccc
Q 007076 203 ESWSMVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDG 277 (619)
Q Consensus 203 e~~~~~~~----~~~~~dyl~~~LTG~~-~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~ 277 (619)
|+|+++++ |++++|||.|+|||+. ..++.|+ +|+|++||+++++||+++|+.+||++.+
T Consensus 172 e~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~td~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~-- 235 (520)
T 4e1j_A 172 GAQVRAAKGELCFGTIDTFLIWRLTGGECFCTDATN--------------ASRTLLYNIAENAWDDELTEVLRVPKEM-- 235 (520)
T ss_dssp THHHHHHTTCEEEEEHHHHHHHHHTTTCCCEEEHHH--------------HTTSSSEETTTTEECHHHHHHHTCCGGG--
T ss_pred HHHHHHhcCCeEecCHHHHHHHHhcCCCeeeecHHH--------------hhhhcccccccCCCCHHHHHHcCCCHHH--
Confidence 99999874 7789999999999973 2344443 5678899999999999999999999754
Q ss_pred cccccCcccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEeccc
Q 007076 278 HHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTS 357 (619)
Q Consensus 278 ~lp~l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs 357 (619)
|| +++++++++|. ++++ ||++|+||++|++|++|+++|+ |+.++ +++.+++|||
T Consensus 236 -LP----~i~~~~~~~G~-~~~~-----~l~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs 289 (520)
T 4e1j_A 236 -LP----EVKDCAADFGV-TDPS-----LFGAAIPILGVAGDQQAATIGQ-ACFKP--------------GMLKSTYGTG 289 (520)
T ss_dssp -SC----EEECSBSCCCB-CCHH-----HHTSCCBEEEECCHHHHHHHHT-TCCST--------------TCEEEEESSS
T ss_pred -CC----ceecCCCceee-eChh-----hCCCCCeEEEECCcHHHHHHhC-CCCCC--------------CcEEEEecCc
Confidence 46 68899999997 8864 5678999999999999999998 55543 5899999999
Q ss_pred ceeeeee-ccccccC-Cccccccccc-cCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhh
Q 007076 358 TCHMAVS-RNKLFIP-GVWGPFWSAM-VPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESM 434 (619)
Q Consensus 358 ~~~~~~~-~~~~~~~-~~~~~~~~~~-~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~ 434 (619)
+++...+ +++..++ +.+..+++.. .++.|.++++++++|.+++|+++.+.. ...|+++++++++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~~~~~l~~~a~~~ 357 (520)
T 4e1j_A 290 CFALLNTGKDMVRSKNRLLTTIAYRLDGETTYALEGSIFVAGAAVQWLRDGLKV------------IKAAPDTGSLAESA 357 (520)
T ss_dssp EEEEEECTTCCCCCSSSCEEEEEEEETTEEEEEEEEEESCSHHHHHHHHHTTCC------------C-----CHHHHHTS
T ss_pred hheEEecCCccccCCCceeeEEeEecCCCceEEEcchHhhHHHHHHHHHHHcCC------------cccHHHHHHHHhcC
Confidence 9877766 5555443 3332222222 124799999999999999999998742 12356677766542
Q ss_pred hhccCCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----C
Q 007076 435 IHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH----G 510 (619)
Q Consensus 435 ~~~~~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~----g 510 (619)
++++|++|+|||+|+|+|+||+++||+|+|++.+|++.|++ ||++||+||++|++++.|++. |
T Consensus 358 ----------~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~l~---RAvlEgia~~~r~~l~~l~~~~~~~g 424 (520)
T 4e1j_A 358 ----------DPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEFA---RAALEAVCYQTRDLLEAMHKDWRRNG 424 (520)
T ss_dssp ----------CTTCCCEEECCTTCBCTTTCBTTCCCEEEEECTTCCHHHHH---HHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred ----------CCCCcEEEEcCccCCCCCCCCCCCCEEEecccCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 36899999999999999999999999999999999999865 599999999999999999875 6
Q ss_pred CCcCEEEEecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhH
Q 007076 511 HKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVK 590 (619)
Q Consensus 511 ~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~ 590 (619)
++++|+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++. ++....++|+| +++++
T Consensus 425 -~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~~~-~~~~~~~~~~P--~~~~~ 500 (520)
T 4e1j_A 425 -NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAFA-KSWARDRRFEP--HMDEA 500 (520)
T ss_dssp ---CCEEEESGGGGCHHHHHHHHHHHTSCEEEESCCCHHHHHHHHHHHHHHTSSCCHHHHH-HTCCEEEEECC--CSCHH
T ss_pred -CcceEEEeCccccCHHHHHHHHHHhCCeEEecCCCccHHHHHHHHHHHHcCCcCCHHHHH-hhcCCCeEECC--CCCHH
Confidence 889999999999999999999999999999999999999999999999999999999875 55677889999 87776
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 007076 591 KYHDAKYLIFRELFEQQV 608 (619)
Q Consensus 591 ~~y~~~y~~y~~l~~~~~ 608 (619)
+ |+++|++|+++|++..
T Consensus 501 ~-~~~~y~~~~~~~~~~~ 517 (520)
T 4e1j_A 501 T-RKVKLKGWRSAVKRTL 517 (520)
T ss_dssp H-HHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHh
Confidence 6 7999999999998764
No 7
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=1.4e-85 Score=724.63 Aligned_cols=475 Identities=25% Similarity=0.366 Sum_probs=409.2
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeeccccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc-c
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT-C 133 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~-~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~-~ 133 (619)
|+||||+|||++|++++|.+|++++..+.+++.+. .+||.||||++||+++++++++++++. ...+|.+|||++| +
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~--~~~~i~~Igis~~~~ 78 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQH--SLQDVKALGIAGQMH 78 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHS--CCTTCCEEEEEECSS
T ss_pred CEEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhC--CccceEEEEEcCCcC
Confidence 37999999999999999999999999999998654 899999999999999999999998764 2568999999998 5
Q ss_pred cc--ccCCCCeeeecCCCCCCccceeecccccHHHHHHHHccchhHHhhhCCCCCCCChHHHHHHHHHhCchhHhcccee
Q 007076 134 SL--VDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFRW 211 (619)
Q Consensus 134 ~~--vd~~G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~ 211 (619)
++ ||++|+|+ +|+|.|+|.|+.++++++++....++++||+++++.++++||+|+++|+||+|+++.+|
T Consensus 79 ~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~P~~~~~~~~~ 149 (484)
T 2itm_A 79 GATLLDAQQRVL---------RPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKV 149 (484)
T ss_dssp CBEEECTTCCBC---------SCEECTTCCTTHHHHHHHHHHCTTHHHHHSSCCCTTSHHHHHHHHHHHCHHHHTTCCEE
T ss_pred cEEEECCCcCCC---------cccceecccCcHHHHHHHHHhHHHHHHHhCCCCCcccHHHHHHHHHHhChHHHHHHhhe
Confidence 54 49999999 89999999999999999987655677889999999999999999999999999999999
Q ss_pred eechhHHHhhhcCCcccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccccCcccccCCC
Q 007076 212 MDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAFPGH 291 (619)
Q Consensus 212 ~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~l~~~v~~~g~ 291 (619)
++++|||.|+|||+.. ++.|+ +++|++||+++++||+++|+.+||+..+ || +++++++
T Consensus 150 l~~~d~l~~~LTG~~~-td~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---lp----~i~~~~~ 207 (484)
T 2itm_A 150 LLPKDYLRLRMTGEFA-SDMSD--------------AAGTMWLDVAKRDWSDVMLQACDLSRDQ---MP----ALYEGSE 207 (484)
T ss_dssp ECHHHHHHHHHHSCCE-EEHHH--------------HHTTTCEETTTTEECHHHHHTTTCCGGG---SC----EEECTTS
T ss_pred eCcHHHHHHHHhCCce-eeHHH--------------hhccccccCCCCCcCHHHHHHcCCCHHH---CC----CccCCcc
Confidence 9999999999999864 34443 5678899999999999999999999753 36 7889999
Q ss_pred ccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccceeeeeeccccccC
Q 007076 292 PLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKLFIP 371 (619)
Q Consensus 292 ~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~~~~~~~~~~~ 371 (619)
++|. |++++|+++||+ |+||++|+||++|+++|+ ++..+ +++.+++|||+++..+++.+..++
T Consensus 208 ~~G~-~~~~~a~~~Gl~-g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~~~~~~~~~~~ 270 (484)
T 2itm_A 208 ITGA-LLPEVAKAWGMA-TVPVVAGGGDNAAGAVGV-GMVDA--------------NQAMLSLGTSGVYFAVSEGFLSKP 270 (484)
T ss_dssp EEEE-CCHHHHHHHTSC-CCEEECCEEHHHHHHHHH-TCCST--------------TCEEEEESSSEEEEEECSSCCCCC
T ss_pred eeec-cCHHHHHHhCCC-CCeEEEEchHHHHHHHhC-CCCCC--------------CcEEEEccchheeEEecCCCccCc
Confidence 9997 999999999999 999999999999999998 44433 579999999999988888776554
Q ss_pred Cc-cccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhccCCCCccCCCCce
Q 007076 372 GV-WGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTEDI 450 (619)
Q Consensus 372 ~~-~~~~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl 450 (619)
.. ...+ .+..++.|+++++++++|.+++|+++.+. ...|+.+++++++. +++++|+
T Consensus 271 ~~~~~~~-~~~~~g~~~~~~~~~~~G~~~~W~~~~~~-------------~~~~~~~~~~a~~~---------~~~~~gl 327 (484)
T 2itm_A 271 ESAVHSF-CHALPQRWHLMSVMLSAASCLDWAAKLTG-------------LSNVPALIAAAQQA---------DESAEPV 327 (484)
T ss_dssp SSSCEEE-ECSSTTCEEEEEEECCHHHHHHHHHHHTT-------------CCSHHHHHHHGGGC---------CTTSCCC
T ss_pred ccceEEe-ecccCCeeeeeehhhhHHHHHHHHHHhcC-------------cccHHHHHHHHhcC---------CCCCCCe
Confidence 32 1122 33457899999999999999999998763 12356666555432 3689999
Q ss_pred EEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHH
Q 007076 451 HVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQ 530 (619)
Q Consensus 451 ~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Q 530 (619)
+|+|||.|+|+|+||+++||.|+|++..|++.|+. ||++||++|++|++++.|++.|.++++|+++||++||++|+|
T Consensus 328 ~~lP~~~G~r~P~~~~~a~g~~~Gl~~~~~~~~~~---rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Q 404 (484)
T 2itm_A 328 WFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELA---RAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQ 404 (484)
T ss_dssp EEEEEEC--------CCEEEEEEEEETTCCHHHHH---HHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHH
T ss_pred EEeCCCCCCCCCCCCCCCceEEEcCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHH
Confidence 99999999999999999999999999999999865 599999999999999999988888899999999999999999
Q ss_pred HHHhhhCCceeecCCCCc-cchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 007076 531 QHADIIGCPIILPRENES-VLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFEQQVS 609 (619)
Q Consensus 531 i~Advlg~pV~~~~~~e~-~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~~~~~ 609 (619)
++||++|+||+++...|. +|+|||++|++++|.|++++++.+.+ ...++|+| +++.++.|+++|++|+++|++++.
T Consensus 405 i~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~~~~~~~~~~~~-~~~~~~~P--~~~~~~~y~~~y~~~~~~~~~~~~ 481 (484)
T 2itm_A 405 MLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQL-PLEQSHLP--DAQRYAAYQPRRETFRRLYQQLLP 481 (484)
T ss_dssp HHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCTTSCHHHHSCCC-CEEEEECC--CHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCCcCCHHHHHHhc-CCCeEECC--CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998885 89999999999999999999876544 45678999 999999999999999999998764
No 8
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=1.8e-85 Score=726.53 Aligned_cols=477 Identities=19% Similarity=0.339 Sum_probs=412.6
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
++|+||||+|||++|++|+|.+|+++++.+.+++.+ +.+||+||||++||+++++++++++++.++...+|.+|||++|
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 83 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQ 83 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CCEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhheEEEEeeCC
Confidence 579999999999999999999999999999999764 5899999999999999999999999887777789999999998
Q ss_pred -ccc--ccCC-CCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCchhHh
Q 007076 133 -CSL--VDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 206 (619)
Q Consensus 133 -~~~--vd~~-G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 206 (619)
+++ ||++ |+|+ +|+|+|+|.|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|+
T Consensus 84 ~~~~v~~D~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 154 (506)
T 3h3n_X 84 RETTVVWDKTTGQPI---------ANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQE 154 (506)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCCCTTSHHHHHHHHHHHSTTHHH
T ss_pred cccEEEEeCCCCeEC---------CCceEecCcchHHHHHHHHhccCHHHHHHHhCCCCCchhHHHHHHHHHHhCHHHHH
Confidence 654 5988 9999 8999999999999999998874 67899999999999999999999999999999
Q ss_pred ccce----eeechhHHHhhhcCCc-ccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccc
Q 007076 207 MVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 281 (619)
Q Consensus 207 ~~~~----~~~~~dyl~~~LTG~~-~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~ 281 (619)
++++ |++++|||.|+|||+. ..++.|+ +++|++||+++++||+++|+.+||++.+ ||
T Consensus 155 ~~~~~~~~~~~~~dyl~~~LTG~~~~~td~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP- 216 (506)
T 3h3n_X 155 KADNGELLFGTIDSWLVWKLTDGQVHVTDYSN--------------ASRTMLYNIHKLEWDQEILDLLNIPSSM---LP- 216 (506)
T ss_dssp HHHTTCEEEECHHHHHHHHHTTTSCCEEEHHH--------------HHTTTSEETTTTEECHHHHHHTTCCGGG---CC-
T ss_pred HHhcCCeEEecHHHHHHHHhcCCceeeeEHHH--------------hhhhhCeecCCCCcCHHHHHHcCcCHHH---CC-
Confidence 9885 7889999999999953 2344443 5678899999999999999999999754 46
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccceee
Q 007076 282 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 361 (619)
Q Consensus 282 l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~ 361 (619)
+++++++++|. +++++ ++| +||||++|++|++|+++|+ ++..+ +++.+++|||+++.
T Consensus 217 ---~i~~~~~~~G~-~~~~~--~lg--~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~ 273 (506)
T 3h3n_X 217 ---EVKSNSEVYGH-TRSYR--FYG--SEVPIAGMAGDQQAALFGQ-MAFEK--------------GMIKNTYGTGAFIV 273 (506)
T ss_dssp ---EEECSEEEEEE-CCGGG--TTT--CCCEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEE
T ss_pred ---ceecCCCccee-eChHH--hcC--CCCeEEEECCcHHHHHHhC-CCCCC--------------CcEEEEecchheee
Confidence 78899999997 99876 366 8999999999999999998 55543 68999999999776
Q ss_pred eeec-cccccC-CccccccccccCC--eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhc
Q 007076 362 AVSR-NKLFIP-GVWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHE 437 (619)
Q Consensus 362 ~~~~-~~~~~~-~~~~~~~~~~~~~--~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 437 (619)
..+. ++...+ +.+..++ +..++ .|.++++++++|.+++|+++.+.. .+.|+++++++++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~~~~~l~~~a~~~--- 337 (506)
T 3h3n_X 274 MNTGEEPQLSDNDLLTTIG-YGINGKVYYALEGSIFVAGSAIQWLRDGLRM------------IETSPQSEELAAKA--- 337 (506)
T ss_dssp EEEETCCCSCCTTSEEEEE-EEETTEEEEEEEEEECCSSHHHHHHHHTSCC------------CSSTTHHHHHHTTC---
T ss_pred eecCCccccCCCceEEEee-eecCCCCEEEEecchhhHHHHHHHHHHHcCC------------CCcHHHHHHHHhcC---
Confidence 6553 444333 3332232 22344 699999999999999999998742 12466777766542
Q ss_pred cCCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcCEE
Q 007076 438 RNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTL 516 (619)
Q Consensus 438 ~~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~-~g~~~~~I 516 (619)
| ..+|++|+|||.|+|+|+||+++||+|+|++..|++.|++ ||++|||||++|++++.|++ .|.++++|
T Consensus 338 ---~----~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~---RAvlEgia~~~r~~~~~l~~~~g~~~~~i 407 (506)
T 3h3n_X 338 ---K----GDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFV---RATLQAVAYQSKDVIDTMKKDSGIDIPLL 407 (506)
T ss_dssp ---C----SCSCCEEECCTTCBCTTTCBTTCCCEEECCCTTCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHCSCCCEE
T ss_pred ---C----CCCceEEeccccCCCCCccCCCCCEEEEccCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCCEE
Confidence 2 3489999999999999999999999999999999999865 59999999999999999987 58899999
Q ss_pred EEecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHH
Q 007076 517 LACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAK 596 (619)
Q Consensus 517 ~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~ 596 (619)
+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++ .++.+..++|+| +++.+ .|+++
T Consensus 408 ~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~~~~~~P--~~~~~-~~~~~ 483 (506)
T 3h3n_X 408 KVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDEL-KSMAEEGQMFTP--EMPAE-ERDNL 483 (506)
T ss_dssp EEESGGGGCHHHHHHHHHHHTSEEEECSSSCHHHHHHHHHHHHHTTSSCSHHHH-HTTCCCCCEECC--CSCHH-HHHHH
T ss_pred EEecccccCHHHHHHHHHHhCCeEEecCCCcchhHHHHHHHHHHhCccCCHHHH-HHhcCCCeEECC--CCCHH-HHHHH
Confidence 999999999999999999999999999999999999999999999999999986 456677899999 77654 58999
Q ss_pred HHHHHHHHHHHHHH
Q 007076 597 YLIFRELFEQQVSQ 610 (619)
Q Consensus 597 y~~y~~l~~~~~~~ 610 (619)
|++|+++|++++.|
T Consensus 484 y~~~~~~~~~~~~~ 497 (506)
T 3h3n_X 484 YEGWKQAVAATQTF 497 (506)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998875
No 9
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=3.5e-85 Score=723.80 Aligned_cols=477 Identities=19% Similarity=0.324 Sum_probs=412.1
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
++|+||||+|||++|++|+|.+|+++++.+++++.. +.+||.||||++||+++++++++++++.++++.+|.+|||++|
T Consensus 5 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 84 (501)
T 3g25_A 5 EKYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRADQIAGIGITNQ 84 (501)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEEC
T ss_pred ccEEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEECC
Confidence 369999999999999999999999999999999754 5899999999999999999999999887777789999999998
Q ss_pred -cc--cccCC-CCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCchhHh
Q 007076 133 -CS--LVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 206 (619)
Q Consensus 133 -~~--~vd~~-G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 206 (619)
++ +||++ |+|+ +|+|+|+|.|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|+
T Consensus 85 ~~~~v~~D~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~ 155 (501)
T 3g25_A 85 RETTVVWDKHTGRPI---------YHAIVWQSRQTQSICSELKQQGYEQTFRDKTGLLLDPYFAGTKVKWILDNVEGARE 155 (501)
T ss_dssp SSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCSSTTSHHHHHHHHHHHSTTHHH
T ss_pred cCcEEEEECCCCeEC---------CCceeeccCChHHHHHHHHhccCHHHHHHHHCCCCCchhHHHHHHHHHHhCHHHHH
Confidence 55 45998 9999 8999999999999999998864 67999999999999999999999999999999
Q ss_pred ccce----eeechhHHHhhhcCCc-ccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccc
Q 007076 207 MVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 281 (619)
Q Consensus 207 ~~~~----~~~~~dyl~~~LTG~~-~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~ 281 (619)
++++ |++++|||.|+|||+. ..++.|+ |++|++||+++++||+++|+.+||++.+ ||
T Consensus 156 ~~~~~~~l~~~~~dyl~~~LTG~~~~~td~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP- 217 (501)
T 3g25_A 156 KAENGDLLFGTIDTWLVWKLSGKAAHITDYSN--------------ASRTLMFNIHDLEWDDELLELLTVPKNM---LP- 217 (501)
T ss_dssp HHHTTCEEEEEHHHHHHHHHTTTSCCEEEHHH--------------HTTSSSEETTTTEECHHHHHHHTCCGGG---CC-
T ss_pred HHhcCCeEEecHHHHHHHHhcCCCeeeeeHHH--------------hhcccCeeCCCCCCCHHHHHHhCcCHHH---CC-
Confidence 9987 7889999999999952 2344443 5678899999999999999999999754 46
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccceee
Q 007076 282 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 361 (619)
Q Consensus 282 l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~ 361 (619)
+++++++++|. ++++. .+| +|+||++|++|++|+++|+ ++.++ +++.+++|||+++.
T Consensus 218 ---~i~~~~~~~G~-~~~~~--~~g--~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~ 274 (501)
T 3g25_A 218 ---EVKASSEVYGK-TIDYH--FYG--QEVPIAGVAGDQQAALFGQ-ACFER--------------GDVKNTYGTGGFML 274 (501)
T ss_dssp ---EEECSEEEEEE-CCGGG--TTT--CCCEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEE
T ss_pred ---ceecCCCceec-cchHH--hCC--CCCeEEEECccHHHHHHhC-CCCCC--------------CcEEEEccchhhee
Confidence 78899999997 88763 345 8999999999999999998 55543 58999999999877
Q ss_pred eeec-cccccC-CccccccccccCC--eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhc
Q 007076 362 AVSR-NKLFIP-GVWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHE 437 (619)
Q Consensus 362 ~~~~-~~~~~~-~~~~~~~~~~~~~--~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 437 (619)
+.+. .+...+ +.+..++ +..++ .|.++|+++++|.+++|+++.+.. ...|+++++++++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~~~~~l~~~a~~~--- 338 (501)
T 3g25_A 275 MNTGDKAVKSESGLLTTIA-YGIDGKVNYALEGSIFVSGSAIQWLRDGLRM------------INSAPQSESYATRV--- 338 (501)
T ss_dssp EECTTSCCCCSSSCEEEEE-EEETTEEEEEEEEEESCSTHHHHHHHHTSCC------------CSSGGGHHHHHTTS---
T ss_pred eecCCccccCCCCeEEEee-EecCCccEEEEecccccHHHHHHHHHHHcCC------------CCcHHHHHHHHhhC---
Confidence 6654 444433 3332232 23344 799999999999999999998742 12456677766542
Q ss_pred cCCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcCEE
Q 007076 438 RNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTL 516 (619)
Q Consensus 438 ~~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~-~g~~~~~I 516 (619)
| ..+|++|+|||.|+|+|+||+++||+|+|++..|++.|++ ||++||+||++|++++.|++ .|.++++|
T Consensus 339 ---~----~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~---RAvlEgia~~~~~~~~~l~~~~g~~~~~i 408 (501)
T 3g25_A 339 ---D----STEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFI---RATLESLCYQTRDVMEAMSKDSGIDVQSL 408 (501)
T ss_dssp ---S----CCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHH---HHHHHHHHHHHHHHHHHHHHHSSCCCSEE
T ss_pred ---C----CCCeEEEecccccCCCCCCCCCCCEEEEccCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 2 3589999999999999999999999999999999999965 59999999999999999987 68899999
Q ss_pred EEecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHH
Q 007076 517 LACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAK 596 (619)
Q Consensus 517 ~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~ 596 (619)
+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++ +++.+..++|+| +++.+ .|+++
T Consensus 409 ~~~GG~aks~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~~~~~~~-~~~~~~~~~~~P--~~~~~-~~~~~ 484 (501)
T 3g25_A 409 RVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDI-AKNWKLEEKFDP--KMDEG-EREKL 484 (501)
T ss_dssp EEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCTHHH-HHHCCEEEEECC--CCCHH-HHHHH
T ss_pred EEecchhcCHHHHHHHHHHhCCceEecCCCcchHHHHHHHHHHHhCccCCHHHH-HHhccCCeEECC--CCCHH-HHHHH
Confidence 999999999999999999999999999999999999999999999999999986 556777889999 77665 49999
Q ss_pred HHHHHHHHHHHHHH
Q 007076 597 YLIFRELFEQQVSQ 610 (619)
Q Consensus 597 y~~y~~l~~~~~~~ 610 (619)
|++|+++|++.+.|
T Consensus 485 y~~~~~~~~~~~~~ 498 (501)
T 3g25_A 485 YRGWKKAVEATQVF 498 (501)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998765
No 10
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=1.2e-85 Score=728.15 Aligned_cols=478 Identities=19% Similarity=0.313 Sum_probs=412.0
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
|+|+||||+|||++|++|||.+|+++++.+.+++.. +.+||.||||++||+++++++++++++.++.+.+|.+|||++|
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 81 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQ 81 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred CcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhheEEEEEeCC
Confidence 468999999999999999999999999999999754 5899999999999999999999999987777789999999998
Q ss_pred -cc--cccCC-CCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCchhHh
Q 007076 133 -CS--LVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 206 (619)
Q Consensus 133 -~~--~vd~~-G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 206 (619)
++ +||++ |+|+ +|+|+|+|.|+.++++++++.. ++++++||+++++.|+++||+|+++|+||+|+
T Consensus 82 ~~~~v~~D~~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 152 (510)
T 2p3r_A 82 RETTIVWEKETGKPI---------YNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRE 152 (510)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHH
T ss_pred cCcEEEEECCCCeEC---------cccccccCccHHHHHHHHHhcccHHHHHHHhCCCCCcccHHHHHHHHHHcCHHHHH
Confidence 56 45987 9999 8999999999999999998864 67999999999999999999999999999999
Q ss_pred ccce----eeechhHHHhhhcCCc-ccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccc
Q 007076 207 MVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 281 (619)
Q Consensus 207 ~~~~----~~~~~dyl~~~LTG~~-~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~ 281 (619)
++++ |++++|||.|+|||+. ..++.|+ ||+|++||+++++||+++|+.+||++.+ ||
T Consensus 153 ~~~~~~~l~~~~~dyl~~~LTG~~~~~td~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP- 214 (510)
T 2p3r_A 153 RARRGELLFGTVDTWLIWKMTQGRVHVTDYTN--------------ASRTMLFNIHTLDWDDKMLEVLDIPREM---LP- 214 (510)
T ss_dssp HHHTTCEEEECHHHHHHHHHTTTSCCEEEHHH--------------HHTTSSEETTTTEECHHHHHHHTCCGGG---CC-
T ss_pred HHhcCCeEecCHHHHHHHHhcCCCeEEeehhH--------------hhhhccccCccCCCCHHHHHHhCCCHHH---CC-
Confidence 9987 7789999999999942 2344443 5678899999999999999999999754 46
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccceee
Q 007076 282 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 361 (619)
Q Consensus 282 l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~ 361 (619)
+++++++++|. +++ +.+| ++||||++|++|++|+++|+ ++..+ +++.+++|||+++.
T Consensus 215 ---~i~~~~~~~G~-~~~---~~lG-~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~ 271 (510)
T 2p3r_A 215 ---EVRRSSEVYGQ-TNI---DGKG-GTRIPISGIAGDQQAALFGQ-LCVKE--------------GMAKNTYGTGCFML 271 (510)
T ss_dssp ---EEECSEEEEEE-ECT---TCTT-SCCEEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEE
T ss_pred ---ceecCCCceee-ech---hhcC-CCCCeEEEECchHHHHHHhc-CCCCC--------------CcEEEeecchheeE
Confidence 78899999997 875 3567 89999999999999999998 55543 58999999999765
Q ss_pred eee-ccccccC-Cccccccccc-cCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhcc
Q 007076 362 AVS-RNKLFIP-GVWGPFWSAM-VPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHER 438 (619)
Q Consensus 362 ~~~-~~~~~~~-~~~~~~~~~~-~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 438 (619)
..+ +++..++ +.+..+++.. .++.|.++|+++++|.+++|+++.+.. ...|+++++++++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~~~~~l~~~a~~~---- 335 (510)
T 2p3r_A 272 MNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKL------------INDAYDSEYFATKV---- 335 (510)
T ss_dssp EECTTCCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCC------------CCSSSCHHHHHTTS----
T ss_pred EecCCccccCCCCeeEEEeeecCCCceEEEccchhhHHHHHHHHHHHccC------------CCcHHHHHHHHhhC----
Confidence 554 4554443 3332232222 135899999999999999999998742 12355666666542
Q ss_pred CCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcCEEE
Q 007076 439 NSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH-GHKIDTLL 517 (619)
Q Consensus 439 ~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~-g~~~~~I~ 517 (619)
++++|++|+|||.|+|+|+||+++||+|+|++..|++.|++ ||++||+||++|++++.|++. |.++++|+
T Consensus 336 ------~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~---RAvlEgia~~~r~~~~~l~~~~g~~~~~i~ 406 (510)
T 2p3r_A 336 ------QNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHII---RATLESIAYQTRDVLEAMQADSGIRLHALR 406 (510)
T ss_dssp ------SSCTTCEEECCTTCCBTTTCCTTCCEEEEEECTTCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCCSEEE
T ss_pred ------CCCCceEEeCcccCCCCCCCCCCCCEEEECCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCccEEE
Confidence 25899999999999999999999999999999999999965 599999999999999999874 88999999
Q ss_pred EecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHHH
Q 007076 518 ACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKY 597 (619)
Q Consensus 518 ~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~y 597 (619)
++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++ +++.+..++|+| +++ .+.|+++|
T Consensus 407 ~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~~~~~~P--~~~-~~~~~~~y 482 (510)
T 2p3r_A 407 VDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDEL-QEKAVIEREFRP--GIE-TTERNYRY 482 (510)
T ss_dssp EESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHHTSSSCGGGG-TTCCCEEEEECC--CSC-HHHHHHHH
T ss_pred EeCchhcCHHHHHHHHHHhCCceEecCCCCcHHHHHHHHHHHHhCccCCHHHH-HHhcCCCeEECC--CCC-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999884 556667889999 754 67999999
Q ss_pred HHHHHHHHHHHHH
Q 007076 598 LIFRELFEQQVSQ 610 (619)
Q Consensus 598 ~~y~~l~~~~~~~ 610 (619)
++|+++|++++.|
T Consensus 483 ~~~~~~~~~~~~~ 495 (510)
T 2p3r_A 483 AGWKKAVKRAMAW 495 (510)
T ss_dssp HHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhhh
Confidence 9999999998764
No 11
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=2.7e-85 Score=728.46 Aligned_cols=476 Identities=19% Similarity=0.315 Sum_probs=405.9
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
+||+||||+||||+|++|||.+|++++..+++++.+ +.+||+||||++||+++++++++++++.++++.+|++|||++|
T Consensus 3 kkYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~I~aIgis~q 82 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQ 82 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred ceEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhEEEEEEeCC
Confidence 589999999999999999999999999999999865 4999999999999999999999999998888899999999998
Q ss_pred -ccc--ccCC-CCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCchhHh
Q 007076 133 -CSL--VDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 206 (619)
Q Consensus 133 -~~~--vd~~-G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 206 (619)
+++ ||++ |+|+ +|+|+|+|.|+.++++++.+.. +.++++||+++++.++++||+|+++|+|++|+
T Consensus 83 ~~~~v~~D~~~G~pl---------~~ai~W~D~R~~~~~~~l~~~~~~~~i~~~tG~~~~~~~~~~kl~Wl~~~~p~~~~ 153 (526)
T 3ezw_A 83 RETTIVWEKETGKPI---------YNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRE 153 (526)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHH
T ss_pred CCCEEEEECCCCeEc---------ccceecCCcchHHHHHHHHhhccHHHHHHHhCCCCCcccHHHHHHHHHHcCchHHH
Confidence 554 4875 9999 8999999999999999998875 56889999999999999999999999999999
Q ss_pred ccce----eeechhHHHhhhcCCc-ccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccc
Q 007076 207 MVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 281 (619)
Q Consensus 207 ~~~~----~~~~~dyl~~~LTG~~-~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~ 281 (619)
++.+ +..+++||.|+|||.. ..++.|+ +|+|++||+++++||+++|+.+||+..+ ||
T Consensus 154 ~~~~~~~~~~~i~~~L~~~Lt~g~~~~td~s~--------------As~t~l~d~~~~~w~~~ll~~~gi~~~~---LP- 215 (526)
T 3ezw_A 154 RARRGELLFGTVDTWLIWKMTQGRVHVTDYTN--------------ASRTMLFNIHTLDWDDKMLEVLDIPREM---LP- 215 (526)
T ss_dssp HHHTTCEEEECHHHHHHHHHTTTSCCEEEHHH--------------HTTSSSEETTTTEECHHHHHHHTCCGGG---CC-
T ss_pred HHHHhhhhccchhHHHhhhhcCCCceEEEchh--------------hccccCcCccccCcCHHHHHHcCCCHHH---CC-
Confidence 9876 6678899999999754 2344443 5688999999999999999999999854 36
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccceee
Q 007076 282 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 361 (619)
Q Consensus 282 l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~ 361 (619)
+++++++++|. ++++++ +..|+||++|++|++|+++|+ ++.++ +++.+++|||+++.
T Consensus 216 ---~i~~~~~~~G~-~~~~~~----~~~gipV~~g~gD~~aa~~G~-g~~~~--------------g~~~~s~GTs~~~~ 272 (526)
T 3ezw_A 216 ---EVRRSSEVYGQ-TNIDGK----GGTRIPISGIAGDQQAALFGQ-LCVKE--------------GMAKNTYGTGCFML 272 (526)
T ss_dssp ---EEECSEEEEEE-ECTTCT----TSCCEEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEE
T ss_pred ---CccccccccCc-cchhhh----cCCCCcEEEEcchHHHHhhhc-ccccc--------------ceeEEEeccCeeEe
Confidence 68899999997 887654 446789999999999999998 55544 68999999999988
Q ss_pred eeeccccccCC--cccc-ccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhcc
Q 007076 362 AVSRNKLFIPG--VWGP-FWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHER 438 (619)
Q Consensus 362 ~~~~~~~~~~~--~~~~-~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 438 (619)
+.+.++...+. .... .+....++.|.++|+++++|.+++||++.+.... ..+ ..+. +...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~eg~~~~~G~~~~Wl~~~~~~~~-----------~~~-~~~~-~~~~---- 335 (526)
T 3ezw_A 273 MNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLIN-----------DAY-DSEY-FATK---- 335 (526)
T ss_dssp EECTTSCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCCCC-----------SSS-CHHH-HHTT----
T ss_pred cccCCccccccccceeeeeeccCCcceeeeHHHHHHHHHHHHHHHHHhcccc-----------chh-HHHH-HHhc----
Confidence 88877655442 2111 1222335579999999999999999999875311 011 1111 1111
Q ss_pred CCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcCEEE
Q 007076 439 NSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTLL 517 (619)
Q Consensus 439 ~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~-~g~~~~~I~ 517 (619)
+++++|++|+|||+|+|+|+|||++||+|+||+..|++.|+. ||++||+||++|++++.|++ .|.++++|+
T Consensus 336 -----~~~~~gl~~lP~~~G~r~P~~d~~arG~~~Glt~~~~~~~i~---RAvlEgia~~~r~~le~l~~~~g~~~~~i~ 407 (526)
T 3ezw_A 336 -----VQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHII---RATLESIAYQTRDVLEAMQADSGIRLHALR 407 (526)
T ss_dssp -----SSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCCSEEE
T ss_pred -----cCCCCCeEEeCCCCCCCCCCCCcccCeEEecCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 258999999999999999999999999999999999999965 59999999999999999986 689999999
Q ss_pred EecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHHH
Q 007076 518 ACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKY 597 (619)
Q Consensus 518 ~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~y 597 (619)
++||++||++|+||+||+||+||+++...|++|+|||++|++++|.|+|++|+.+.+ ...++|+| +++.++ |.++|
T Consensus 408 v~GGgaks~~~~Qi~ADvlg~pV~~~~~~E~~alGAA~lA~~a~G~~~~~~e~~~~~-~~~~~~~P--~~~~~~-~~~~y 483 (526)
T 3ezw_A 408 VDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKA-VIEREFRP--GIETTE-RNYRY 483 (526)
T ss_dssp EESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCGGGSTTCC-CEEEEECC--CSCHHH-HHHHH
T ss_pred EECchhhCHHHHHHHHHHHCCEEEeCCCCchHHHHHHHHHHHHhCCCCCHHHHHHhc-CCCeEEcC--CCCHHH-HHHHH
Confidence 999999999999999999999999999999999999999999999999999875544 46789999 778776 45689
Q ss_pred HHHHHHHHHHH
Q 007076 598 LIFRELFEQQV 608 (619)
Q Consensus 598 ~~y~~l~~~~~ 608 (619)
+.|++.+++-+
T Consensus 484 ~~w~~av~r~~ 494 (526)
T 3ezw_A 484 AGWKKAVKRAM 494 (526)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHHh
Confidence 99999887753
No 12
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=2.5e-84 Score=716.63 Aligned_cols=482 Identities=22% Similarity=0.326 Sum_probs=419.1
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
++|+||||+|||++|++++|.+|+++.+.+.+++.. +.+||.||||++||+++++++++++++.+++..+|.+|||++|
T Consensus 2 ~~~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~i~~Igis~~ 81 (497)
T 2zf5_O 2 EKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQ 81 (497)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CcEEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEecC
Confidence 368999999999999999999999999999999754 5899999999999999999999999887666778999999998
Q ss_pred -ccc--ccCCCCeeeecCCCCCCccceeecccccHHHHHHHHccc-hhHHhhhCCCCCCCChHHHHHHHHHhCchhHhcc
Q 007076 133 -CSL--VDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN-SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMV 208 (619)
Q Consensus 133 -~~~--vd~~G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~-~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~ 208 (619)
+++ ||++|+|+ +|+|.|+|.|+.++++++++.. ++++++||.++++.++++||+|+++|+|++|+++
T Consensus 82 ~~~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~ 152 (497)
T 2zf5_O 82 RETTLVWDKDGKPL---------YNAIVWQCRRTAEMVEEIKREYGTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKA 152 (497)
T ss_dssp SSCEEEECTTCCBS---------SCEECTTCCTTHHHHHHHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHSTTHHHHH
T ss_pred CCcEEEECCCCCCc---------ccceeecccCcHHHHHHHHhhhHHHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHHH
Confidence 554 49999999 8999999999999999997652 5788999999999999999999999999999999
Q ss_pred ce----eeechhHHHhhhcCCcccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccccCc
Q 007076 209 FR----WMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGR 284 (619)
Q Consensus 209 ~~----~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~l~~ 284 (619)
++ |++++|||.|+|||+.. ++.|+ +++|++||+++++||+++|+.+||+..+ ||
T Consensus 153 ~~~~~~~~~~~d~l~~~LTG~~~-td~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---lP---- 210 (497)
T 2zf5_O 153 EKGEVMFGTVDTFLIYRLTGEHV-TDYSN--------------ASRTMLFNIKKLDWDDELLELFDIPESV---LP---- 210 (497)
T ss_dssp HTTCCEEEEHHHHHHHHHHSCCE-EEHHH--------------HTTSSSEETTTTEECHHHHHHTTCCGGG---CC----
T ss_pred hcCCCEEEcHHHHHHHHHhCCee-eeHHH--------------hhhhcCccCCCCCcCHHHHHHcCcCHHH---CC----
Confidence 87 89999999999999764 34443 5678899999999999999999999754 36
Q ss_pred ccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccceeeeee
Q 007076 285 SVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVS 364 (619)
Q Consensus 285 ~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~~~~ 364 (619)
+++++++++|. ++++ .+| +|+||++|++|++|+++|+ ++..+ +++++++|||+++...+
T Consensus 211 ~i~~~~~~~G~-~~~~---~~g--~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~~~~ 269 (497)
T 2zf5_O 211 EVRESSEVYGY-TKKE---LLG--AEIPVSGDAGDQQAALFGQ-AAFEA--------------GMVKATYGTGSFILVNT 269 (497)
T ss_dssp EEECSEEEEEE-CCHH---HHS--SCCEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEEEEE
T ss_pred CcCCCCCeeee-cCHH---HcC--CCCeEEEEccHHHHHHHhC-CCCCC--------------CcEEEEcchhheeeEEC
Confidence 78899999997 9987 588 8999999999999999998 44433 58999999999998888
Q ss_pred ccccccC-CccccccccccCC--eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhccCCC
Q 007076 365 RNKLFIP-GVWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSP 441 (619)
Q Consensus 365 ~~~~~~~-~~~~~~~~~~~~~--~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~p 441 (619)
++|..++ +....++ +..++ .|+++++++++|.+++|+++.+.. ...|+++++++++ +
T Consensus 270 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~G~~~~w~~~~~~~------------~~~~~~l~~~a~~------~- 329 (497)
T 2zf5_O 270 DKMVLYSDNLLTTIA-WGLNGRVSYALEGSIFVTGAAVQWLRDGIKI------------IKHASETEELATK------L- 329 (497)
T ss_dssp ETCCCCCTTSEEEEE-EEETTEEEEEEEEEESCSHHHHHHHHHTSCC------------CSCGGGHHHHHTT------S-
T ss_pred CCCccCCCCcEEEEE-EEcCCCCEEEEechhhhHHHHHHHHHHHhCC------------CCcHHHHHHHHhh------C-
Confidence 8776544 2222232 22333 799999999999999999987642 1235566665543 2
Q ss_pred CccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecC
Q 007076 442 FVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGG 521 (619)
Q Consensus 442 ~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG 521 (619)
++++|++|+|||.|+|+|+||+++||.|+|++..|++.|++ ||++||+||+++++++.|++.+ ++++|+++||
T Consensus 330 ---~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG 402 (497)
T 2zf5_O 330 ---ESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGG 402 (497)
T ss_dssp ---SSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESG
T ss_pred ---CCCCceEEecCcCCCCCCCCCCCCCEEEEeCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCc
Confidence 25889999999999999999999999999999999999975 5999999999999999998877 8899999999
Q ss_pred CcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHHHHHHH
Q 007076 522 LAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFR 601 (619)
Q Consensus 522 ~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~ 601 (619)
++||++|+|++||++|+||+++...|++|+|||++|++++|.|++++++. ++....++|+| +++. +.|+++|++|+
T Consensus 403 ~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA~~~~g~~~~~~~~~-~~~~~~~~~~P--~~~~-~~y~~~y~~~~ 478 (497)
T 2zf5_O 403 ATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIA-ELWKAERIFEP--KMDE-KTRERLYKGWK 478 (497)
T ss_dssp GGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSSCCHHHHH-TTCCEEEEECC--CCCH-HHHHHHHHHHH
T ss_pred cccCHHHHHHHHhhcCCeEEEcCCCcchHHHHHHHHHHHhCccCCHHHHH-HhcCCCeEECC--CccH-HHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999874 55566788999 8787 89999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 007076 602 ELFEQQVSQRSIMAQAL 618 (619)
Q Consensus 602 ~l~~~~~~~~~~~~~~~ 618 (619)
++|++++.|+++|..++
T Consensus 479 ~~~~~~~~~~~~~~~~~ 495 (497)
T 2zf5_O 479 EAVKRAMGWAKVVDSAK 495 (497)
T ss_dssp HHHHTTTTGGGTCCCC-
T ss_pred HHHHHHHhHhhhhhhhc
Confidence 99999999988776543
No 13
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=1.3e-83 Score=712.09 Aligned_cols=474 Identities=18% Similarity=0.285 Sum_probs=412.5
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEEcC
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLA--NVDGEEVKGVGFAA 131 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~--~~~~~~I~aIgis~ 131 (619)
+|+||||+|||++|++++|.+|+++.+.+.+++.. +.+||.||||++||+++++++++++++. ++...+|.+|||++
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~~~i~~Igis~ 83 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTSVIIKCIGITN 83 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred cEEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCCccceEEEEEcC
Confidence 68999999999999999999999999999999765 4899999999999999999999998875 45567899999999
Q ss_pred c-cc--cccCC-CCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCchhH
Q 007076 132 T-CS--LVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESW 205 (619)
Q Consensus 132 ~-~~--~vd~~-G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~ 205 (619)
| ++ +||++ |+|+ +|+|.|+|.|+.++++++.+.. +.++++||+++++.++++||+|+++|+|++|
T Consensus 84 ~~~~~~~~D~~~G~~l---------~~~i~w~D~r~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~ 154 (503)
T 2w40_A 84 QRETVIIWDRITGKPL---------YNAIVWLDTRVEELVTEFSAKYNNNDIQKKTGTYFNTYFSAFKILWLIQNNPEIK 154 (503)
T ss_dssp CSSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHHSCHHHHHHHHSSCCCSSSHHHHHHHHHHHCHHHH
T ss_pred CcceEEEEECCCCcCC---------ccceeecccCcHHHHHHHHhccchHHHHHHhCCCCCcccHHHHHHHHHHhChHHH
Confidence 8 44 56988 9999 8999999999999999998764 5788999999999999999999999999999
Q ss_pred hccce----eeechhHHHhhhcCCcccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCC-cccccccc
Q 007076 206 SMVFR----WMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLG-DLIDGHHA 280 (619)
Q Consensus 206 ~~~~~----~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~-~~l~~~lp 280 (619)
+++++ |++++|||.|+|||+...++.|+ +|+|++||+++++||+++|+.+||+ +.+ ||
T Consensus 155 ~~~~~~~~~~~~~~d~l~~~LTG~~~~~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~~---lP 217 (503)
T 2w40_A 155 QKIDDGTAVIGNINTWLIFNLTKGNCYTDVTN--------------ASRTLLMDINTLQWDEKMCKIFNITNMSV---LP 217 (503)
T ss_dssp HHHHTTCEEEEEHHHHHHHHHHTSCCEEEHHH--------------HTTTTCBCTTTCSBCHHHHHHTTCCCGGG---SC
T ss_pred HHHhcCCeEEECHHHHHHHHHcCCCccccHHH--------------hhhhcCccCCCCccCHHHHHHcCCChHHH---CC
Confidence 99988 99999999999999522344443 5678899999999999999999999 653 46
Q ss_pred ccCcccccCCCccCCCccHHHHHHcCCCC--CCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccc
Q 007076 281 KIGRSVAFPGHPLGSGLTPAAAKELGLVP--GTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTST 358 (619)
Q Consensus 281 ~l~~~v~~~g~~~G~~l~~~~a~~~Gl~~--g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~ 358 (619)
+++++++++|. ++++ .+| + |+||++|++|++|+++|+ +...+ +++++++|||+
T Consensus 218 ----~i~~~~~~~G~-~~~~---~~g--~~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~ 272 (503)
T 2w40_A 218 ----EIKSNCSNFGL-VKSE---HVP--DYLNIPITGCIGDQQSACIGQ-AIFDE--------------GEAKCTYGTGV 272 (503)
T ss_dssp ----EEECSEEEEEE-CCCT---TSG--GGTTCEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSE
T ss_pred ----CccCCcCceee-ccHH---HcC--CCCCceEEEECchHHHHHHhC-CCCCC--------------CcEEEEechhh
Confidence 78899999997 8876 577 7 999999999999999998 44433 58999999999
Q ss_pred eeeeeec-cccccCC-ccccccccccCC----eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHH
Q 007076 359 CHMAVSR-NKLFIPG-VWGPFWSAMVPK----FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLE 432 (619)
Q Consensus 359 ~~~~~~~-~~~~~~~-~~~~~~~~~~~~----~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 432 (619)
++...++ +|..++. .+..++ +..++ .|+++++++++|.+++||++ +.. .+.|++++++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~g~~~~~g~~~~w~~~-~~~------------~~~~~~l~~~a~ 338 (503)
T 2w40_A 273 FLLINTGEKVVYSTCGLITTIC-YKFNDNDKPKYALEGSIGTAGSGVSWLLK-NKL------------IDDPSEASDIME 338 (503)
T ss_dssp EEEEECTTSCCCCSSSCEEEEE-ECCSTTSCCEEEEEEEESCSHHHHHHHHH-TTS------------SSCGGGHHHHHH
T ss_pred eeeeecCCccccCCCCceeEEE-eecCCCCCceEEEechhhhhHhHHHHHHH-hCC------------cCCHHHHHHHHh
Confidence 9988886 4655442 222232 33344 89999999999999999998 642 123667777665
Q ss_pred hhhhccCCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCC
Q 007076 433 SMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGH 511 (619)
Q Consensus 433 ~~~~~~~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~-~g~ 511 (619)
+. ++++|++|+|||.|+|+|+||+++||+|+|++..|++.|++ ||++||+||++|++++.|++ .|.
T Consensus 339 ~~----------~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~---rAvlEgia~~~~~~~~~l~~~~g~ 405 (503)
T 2w40_A 339 KC----------ENTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIV---RALLEGIAFQLNEIVDSLTSDMGI 405 (503)
T ss_dssp HC----------CSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hC----------CCCCCEEEecCCCCCCCCCCCCCCcEEEECCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 42 25889999999999999999999999999999999999865 59999999999999999976 577
Q ss_pred Cc-CEEEEecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhH
Q 007076 512 KI-DTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVK 590 (619)
Q Consensus 512 ~~-~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~ 590 (619)
++ ++|+++||++||++|+|++||++|+||+++...|++|+|||++|++++|.|++++++.+.+.+..++|+| +++.
T Consensus 406 ~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~~~~e~~alGaA~la~~~~G~~~~~~~~~~~~~~~~~~~~P--~~~~- 482 (503)
T 2w40_A 406 EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKSLLRRSDAVFHS--KMDD- 482 (503)
T ss_dssp SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTCSSCHHHHHHHHTCEEEEECC--CSCH-
T ss_pred CccceEEEeCccccCHHHHHHHHHHHCCeEEecCCCcchHHHHHHHHHHHhCccCCHHHHHHhccCCCcEEcc--CCCH-
Confidence 78 8999999999999999999999999999999999999999999999999999999988777777789999 8887
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 007076 591 KYHDAKYLIFRELFEQQVS 609 (619)
Q Consensus 591 ~~y~~~y~~y~~l~~~~~~ 609 (619)
+.|+++|++|+++|++...
T Consensus 483 ~~y~~~y~~~~~~~~~~~~ 501 (503)
T 2w40_A 483 KKRKKKTSEWNKAVERTLI 501 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999988643
No 14
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=1.2e-83 Score=716.63 Aligned_cols=475 Identities=15% Similarity=0.094 Sum_probs=406.6
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-c----CCCc-------cccCHHH-HHHHHHHHHHHHHHHcCCCC
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-K----EGDC-------IEQSSTD-IWHAICAAVDSACSLANVDG 121 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~----~~g~-------~e~dp~~-~~~~~~~~l~~~~~~~~~~~ 121 (619)
+|+||||+|||++|++|||.+|+++++.+++++.. + .+|| .||||++ ||+++..++ +.+.+.++++
T Consensus 10 ~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~-~~l~~~~~~~ 88 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIIL-EKMKASGFDF 88 (538)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHH-HHHHHTTCCG
T ss_pred CEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHH-HHHHHcCCCh
Confidence 59999999999999999999999999999998643 2 2566 4678975 555555554 5556666677
Q ss_pred CCEEEEEEcCc-ccc--ccCCCC--------------------eeeecCCCCCCccceeecccccHHHHHHHHccc---h
Q 007076 122 EEVKGVGFAAT-CSL--VDADGS--------------------PVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN---S 175 (619)
Q Consensus 122 ~~I~aIgis~~-~~~--vd~~G~--------------------pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~---~ 175 (619)
.+|++|||++| +++ ||++|+ |+ +|+|+|+|.|+.++++++++.. +
T Consensus 89 ~~I~aIgis~q~~~~v~~D~~g~~~l~~l~~~~~l~~~~~~~~pl---------~~ai~W~D~R~~~~~~~l~~~~~~~~ 159 (538)
T 4bc3_A 89 SQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSI---------SDCPVWMDSSTTAQCRQLEAAVGGAQ 159 (538)
T ss_dssp GGEEEEEEEECSSCEEEEETTHHHHHHTCCTTSCHHHHHTTCBSC---------SEEECTTCCCCHHHHHHHHHHHTSHH
T ss_pred HHeEEEEecccceeEEEECCCccccccccccccchhhhccccccc---------cCCcccccCcHHHHHHHHHHhhCcHH
Confidence 89999999998 664 498864 66 8999999999999999998752 6
Q ss_pred hHHhhhCCCCCCCChHHHHHHHHHhCchhHhccceeeechhHHHhhhcCCcccccccccccccccccchhhccccccccC
Q 007076 176 PVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRD 255 (619)
Q Consensus 176 ~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d 255 (619)
+++++||+++++.|+++||+|+++|+||+|+++.+|++++|||.|+|||+...++.|+ +|+|++||
T Consensus 160 ~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~~~~~d~l~~~LTG~~~~td~s~--------------As~t~l~d 225 (538)
T 4bc3_A 160 ALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSD--------------GSGMNLLQ 225 (538)
T ss_dssp HHHHHHSSCCCTTSHHHHHHHHHHHCHHHHHTEEEEEEHHHHHHHHHHTSCCCCBHHH--------------HTTSSCEE
T ss_pred HHHHHHCCCCccccHHHHHHHHHHcCHHHHHHhheEEcHHHHHHHHHhCCCcccccch--------------hhcccccc
Confidence 7899999999999999999999999999999999999999999999999875455554 56788999
Q ss_pred CcCCCCCHHHHHHcCCC-ccccccccccCcccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCc
Q 007076 256 MEACGWDDEFWEEIGLG-DLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPES 334 (619)
Q Consensus 256 ~~~~~W~~~ll~~~gi~-~~l~~~lp~l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g 334 (619)
+++++||+++|+.+|++ +. .|| +++++++++|. |++++|+++||++||||++|+||++|+++|+ +. ++
T Consensus 226 ~~~~~W~~~ll~~~gi~~~~---~LP----~i~~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-~~-~~- 294 (538)
T 4bc3_A 226 IQDKVWSQACLGACAPHLEE---KLS----PPVPSCSVVGA-ISSYYVQRYGFPPGCKVVAFTGDNPASLAGM-RL-EE- 294 (538)
T ss_dssp TTTTEECHHHHHHHCTTHHH---HHC----CCBCSSCEEEE-CCHHHHHHHCCCTTCEEECCEEHHHHHHHHT-TC-CT-
T ss_pred cccCCCCHHHHHHhCccHHH---HCC----Ccccccccccc-cCHHHHHHhCCCCCCeEEEecccHHhhhhcc-cc-CC-
Confidence 99999999999999998 43 346 68899999997 9999999999999999999999999999998 64 33
Q ss_pred chhhhhhhhhcccCeEEEEecccceeeeeeccccccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHH
Q 007076 335 VSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLAN 414 (619)
Q Consensus 335 ~~~~~~~~~g~~~~~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~ 414 (619)
+++.+++|||+++.+.++++..++... .+++...++.|+.+++++++|.+++|+++.+.
T Consensus 295 -------------g~~~~s~GTs~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gg~~~~w~~~~~~------- 353 (538)
T 4bc3_A 295 -------------GDIAVSLGTSDTLFLWLQEPMPALEGH-IFCNPVDSQHYMALLCFKNGSLMREKIRNESV------- 353 (538)
T ss_dssp -------------TCEEEEESSSEEEEEEESSCCCCSSSE-EEEETTEEEEEEEEEEESSSHHHHHHHHHHHS-------
T ss_pred -------------CcEEEEeccchheEEecCCCCCCCCcc-eEEeecCCCCEEEeehhhccchHHHHHHHHhc-------
Confidence 689999999999999998877665432 23332334579999999999999999998763
Q ss_pred HHhhccCCHHHHHHHHHHhhhhccCCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEE------cCCCCCCHHHHHHHH
Q 007076 415 RAASRHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIIC------GMTLDSSEKQLALLY 488 (619)
Q Consensus 415 ~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~------Gl~~~~~~~~l~~~~ 488 (619)
...|+++++++++. +++++|++|+|||.|+|+|+ ++|.|. |++. |++.|+ +
T Consensus 354 ------~~~~~~l~~~a~~~---------~~g~~gl~~lp~~~Ger~P~----~~G~~~~~~~~~g~~~-~~~~~l---~ 410 (538)
T 4bc3_A 354 ------SRSWSDFSKALQST---------EMGNGGNLGFYFDVMEITPE----IIGRHRFNTENHKVAA-FPGDVE---V 410 (538)
T ss_dssp ------TTCHHHHHHHHHTS---------CTTGGGCEEEEESSCCSSSC----CCEEEEECTTSCEESC-CCHHHH---H
T ss_pred ------CCCHHHHHHHHhcC---------CCCCCCeEEeecCCCCcCCC----CCceeeeccccccccC-CCHHHH---H
Confidence 23578888877653 36899999999999999997 455554 2333 677775 5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccc--cCC
Q 007076 489 LATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKR--YSS 566 (619)
Q Consensus 489 rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~--~~~ 566 (619)
||++|||||++|++++.|++.+.++++|+++||++||++|+||+||++|+||+++...|++|+|||++|++++|. |++
T Consensus 411 RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~ 490 (538)
T 4bc3_A 411 RALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVIDTANSACVGSAYRAFHGLAGGTDVP 490 (538)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEECCCTTHHHHHHHHHHHHHHHTGGGSC
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEecCCCCchHHHHHHHHHHHhCcccCCC
Confidence 699999999999999999877778899999999999999999999999999999999999999999999999998 899
Q ss_pred HHHHHHHhhcCCeEEcCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 007076 567 LIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFEQQVSQ 610 (619)
Q Consensus 567 ~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~~~~~~ 610 (619)
++++.+.+....++|+| ++++++.|+++|++|+++|+++..+
T Consensus 491 ~~ea~~~~~~~~~~~~P--~~~~~~~Y~~~y~~y~~l~~~~~~~ 532 (538)
T 4bc3_A 491 FSEVVKLAPNPRLAATP--SPGASQVYEALLPQYAKLEQRILSQ 532 (538)
T ss_dssp HHHHHTTSCCCEEEECC--CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCeeECC--CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888778889999 9999999999999999999998765
No 15
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=3.9e-83 Score=707.95 Aligned_cols=476 Identities=20% Similarity=0.336 Sum_probs=413.2
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc-
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT- 132 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~- 132 (619)
+|+||||+|||++|++++|.+|+++.+.+++++.. +.+||.||||++||+++++++++++++.+++..+|.+|||++|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~~g 81 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGITNQR 81 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECS
T ss_pred CEEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCcccEEEEEEeCCC
Confidence 47999999999999999999999999999999864 5899999999999999999999999887666678999999998
Q ss_pred cc--cccCC-CCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCchhHhc
Q 007076 133 CS--LVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 207 (619)
Q Consensus 133 ~~--~vd~~-G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 207 (619)
++ +||++ |+|+ +|+|.|+|.|+.++++++.+.. ++++++||+++++.++++||+|+++|+|++|++
T Consensus 82 ~~~v~vD~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 152 (504)
T 2d4w_A 82 ETAVVWDKTTGKPV---------YNAIVWQDTRTQKIVDELGGDEGAEKYKSIVGLPLATYFSGPKIKWILDNVEGAREK 152 (504)
T ss_dssp SCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHCSSCGGGGHHHHSCCSCTTSHHHHHHHHHHHSTTHHHH
T ss_pred CeEEEEECCCCCCc---------cccceecccChHHHHHHHHhhcchHHHHHHhCCCCCchhHHHHHHHHHHcChhHHHH
Confidence 55 45987 9999 8999999999999999998743 678999999999999999999999999999999
Q ss_pred cce----eeechhHHHhhhcC--C---cccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCcccccc
Q 007076 208 VFR----WMDLSDWLSYRATG--D---DTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGH 278 (619)
Q Consensus 208 ~~~----~~~~~dyl~~~LTG--~---~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~ 278 (619)
+++ |++++|||.|+||| . . .++.|+ +|+|++||+++++||+++|+.+||++.+
T Consensus 153 ~~~~~~~~~~~~d~l~~~LTG~~~~~~~-~~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~--- 214 (504)
T 2d4w_A 153 AEKGDLLFGNTDTWVLWNMTGGTEGGVH-VTDVTN--------------ASRTMLMDLDTLSWREDIAADMGIPLSM--- 214 (504)
T ss_dssp HHHTCEEEECHHHHHHHHHTTTTTTCCC-EEEHHH--------------HTTTTCEETTTTEECHHHHHHTTCCGGG---
T ss_pred HhcCCeEEecHHHHHHHHhcCCCcCCce-eeehhh--------------hhhhcCccCCCCccCHHHHHHhCCCHHH---
Confidence 988 99999999999999 4 3 344443 5678899999999999999999999754
Q ss_pred ccccCcccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccc
Q 007076 279 HAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTST 358 (619)
Q Consensus 279 lp~l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~ 358 (619)
|| +++++++++|. ++++ +.+| + +||++|++|++|+++|+ ++..+ +++.+++|||+
T Consensus 215 lP----~i~~~~~~~G~-~~~~--~~~G--~-~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~ 269 (504)
T 2d4w_A 215 LP----DIRSSSEVYGH-GRPR--GLVP--G-VPIAGILGDQQAATFGQ-ACFEV--------------GQAKNTYGTGN 269 (504)
T ss_dssp SC----EEECSEEEEEE-CCTT--SSST--T-CEEEEEEEHHHHHHHHT-TCCST--------------TEEEEEESSSE
T ss_pred CC----CccCCccceec-cchH--HhCC--C-CeEEEECCcHHHHHhhC-CCCCC--------------CcEEEEcchhh
Confidence 36 78899999997 9875 3577 6 99999999999999998 44433 68999999999
Q ss_pred eeeeeec-cccccC-CccccccccccCC---eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHh
Q 007076 359 CHMAVSR-NKLFIP-GVWGPFWSAMVPK---FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLES 433 (619)
Q Consensus 359 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~---~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 433 (619)
++.+.++ +|..++ +.+..++ +..++ .|+++++++++|.+++|+++.+.. .+.|+++++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~~~~~l~~~a~~ 336 (504)
T 2d4w_A 270 FLLLNTGTEKVMSKNGLLTTVC-YKIGDAPAVYALEGSIAVTGSLVQWLRDNLGM------------FEDAPDVEWLAGK 336 (504)
T ss_dssp EEEEECTTSCCCCSSSCEEEEE-ECCTTSCCEEEEEEEESCSHHHHHHHHHTTCT------------TTTCSCTHHHHTT
T ss_pred eeeeecCCccccCCCCcEEEEE-EEcCCCCceEEEcchhhhHHHHHHHHHHHhCC------------CCCHHHHHHHHhh
Confidence 9988885 465554 3322232 33345 899999999999999999987642 1234556665543
Q ss_pred hhhccCCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCC
Q 007076 434 MIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHK 512 (619)
Q Consensus 434 ~~~~~~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~-~g~~ 512 (619)
. ++++|++|+|||.|+|+|+||+++||+|+|++..|++.|++ ||++||+||++|++++.|++ .|.+
T Consensus 337 ~----------~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~---rAvlEgia~~~~~~~~~l~~~~g~~ 403 (504)
T 2d4w_A 337 V----------QDNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHIA---RAALEATAFQSREVVDAMNADSGVD 403 (504)
T ss_dssp S----------SSCTTCEEECTTCCCSTTTCCCCSCEEEEEECSSCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred C----------CCCCCEEEecCCCCCCCCCCCCCCCEEEEeCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2 25889999999999999999999999999999999999875 59999999999999999976 5788
Q ss_pred cCEEEEecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHH
Q 007076 513 IDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKY 592 (619)
Q Consensus 513 ~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~ 592 (619)
+++|+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|++++++. .+....++|+| +++. +.
T Consensus 404 ~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~~~-~~~~~~~~~~P--~~~~-~~ 479 (504)
T 2d4w_A 404 LTELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVI-DNWAEDKRWSP--SMES-GE 479 (504)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSSCSHHHHH-HHCCEEEEECC--CSCH-HH
T ss_pred cceEEEeCCcccCHHHHHHHHHHhCCeEEeCCCCcchHHHHHHHHHhhcCccCCHHHHH-hhcCCCeEEcc--CCCH-HH
Confidence 89999999999999999999999999999999999999999999999999999999975 56666788999 8887 89
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 007076 593 HDAKYLIFRELFEQQVSQRS 612 (619)
Q Consensus 593 y~~~y~~y~~l~~~~~~~~~ 612 (619)
|+++|++|+++|++++.|.+
T Consensus 480 y~~~y~~~~~~~~~~~~~~~ 499 (504)
T 2d4w_A 480 RERLYRNWKKAVTKTMEWVD 499 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccch
Confidence 99999999999999988743
No 16
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-82 Score=702.17 Aligned_cols=472 Identities=24% Similarity=0.359 Sum_probs=409.5
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc-
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT- 132 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~-~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~- 132 (619)
+|+||||+|||++|++++|.+|+++.+.+.+++.. +.+||.||||++||+++++++++++++.++...+|.+|||++|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~~~ 81 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEVLALGITNQR 81 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEECS
T ss_pred cEEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEeCCC
Confidence 57999999999999999999999999999999754 5899999999999999999999999887666678999999998
Q ss_pred cc--cccCC-CCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhCchhHhc
Q 007076 133 CS--LVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 207 (619)
Q Consensus 133 ~~--~vd~~-G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 207 (619)
++ +||++ |+|+ +|+|.|+|.|+.++++++.+.. +.++++||+++++.++++||+|+++|+|++|++
T Consensus 82 ~~~~~vD~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 152 (495)
T 2dpn_A 82 ETTLLWDRKTGKPL---------HNAIVWQDRRTTPLCEALRAKGLEPLFRERTGLLFDPYFSGTKLVWLLENVPGLKAR 152 (495)
T ss_dssp SCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHTSCCSCTTSHHHHHHHHHHHSSSHHHH
T ss_pred ccEEEEECCCCcCC---------ccceeecccChHHHHHHHHhccchhHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHH
Confidence 54 56987 9999 8999999999999999998763 578899999999999999999999999999999
Q ss_pred cce----eeechhHHHhhhcC--CcccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccc
Q 007076 208 VFR----WMDLSDWLSYRATG--DDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 281 (619)
Q Consensus 208 ~~~----~~~~~dyl~~~LTG--~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~ 281 (619)
+++ |++++|||.|+||| ... ++.|+ +|+|++||+++++||+++|+.+||++.+ ||
T Consensus 153 ~~~~~~~~~~~~d~l~~~LTG~~~~~-~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---lP- 213 (495)
T 2dpn_A 153 AEGGGVAFGTVDTWLIWNLTGGKVHA-TDPTN--------------ASRTLLFNLHTLAWDPELLEALGIPAAL---LP- 213 (495)
T ss_dssp HHHTCEEEECHHHHHHHHHTTTSCCE-ECHHH--------------HTTSSSEETTTTEECHHHHHHTTCCSTT---CC-
T ss_pred HhcCCcEEECHHHHHHHHhcCCCeEE-EehHH--------------hHhhcCccCccCCcCHHHHHHcCCCHHH---CC-
Confidence 988 99999999999999 443 44443 5678899999999999999999999754 36
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEecccceee
Q 007076 282 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 361 (619)
Q Consensus 282 l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~ 361 (619)
+++++++++|. ++++ .+| +|+||++|++|++|+++|+ +...+ +++.+++|||+++.
T Consensus 214 ---~i~~~~~~~G~-~~~~---~~G--~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~ 269 (495)
T 2dpn_A 214 ---EVRPSDGDFGE-TLPE---LLG--APVPIRGVLGDQQAALFGQ-AALGG--------------GEGKCTYGTGAFLL 269 (495)
T ss_dssp ---EECCTTSCCCB-CCHH---HHS--SCCBEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEE
T ss_pred ---CccCCCCeeEe-ccHH---HcC--CCCeEEEECcHHHHHHHhC-CCCCC--------------CcEEEEccHhhhhh
Confidence 68899999997 9987 588 8999999999999999998 44443 68999999999998
Q ss_pred eeec-cccccCC-ccccccccccCC--eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhc
Q 007076 362 AVSR-NKLFIPG-VWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHE 437 (619)
Q Consensus 362 ~~~~-~~~~~~~-~~~~~~~~~~~~--~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 437 (619)
..++ +|..++. .+..++ +..++ .|.++++++++|.+++|+++ +.. .+.|+++++++++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~g~~~~w~~~-~~~------------~~~~~~l~~~a~~~--- 332 (495)
T 2dpn_A 270 LNTGKRPVLSEKGLLATVA-WSLGGRATYALEGSLFVAGAAVGWLKE-VGL------------IRESAEVEALAASV--- 332 (495)
T ss_dssp EECTTSCCCCSSSCEEEEE-EEETTEEEEEEEEEESCSHHHHHHHHH-TTS------------SSSTTTHHHHHHTC---
T ss_pred hhcCCccccCCCCceEEEE-EEcCCCCEEEEechHHhHHHHHHHHHH-cCC------------ccCHHHHHHHHhhC---
Confidence 8885 4655442 222222 22343 79999999999999999998 642 12356676666542
Q ss_pred cCCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcCEE
Q 007076 438 RNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTL 516 (619)
Q Consensus 438 ~~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~-~g~~~~~I 516 (619)
++++|++|+|||.|+|+|+||+++||+|+|++..|++.|++ ||++||+||+++++++.|++ .|.++++|
T Consensus 333 -------~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~~~---rAvlEgia~~~~~~~~~l~~~~g~~~~~i 402 (495)
T 2dpn_A 333 -------EDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLA---RAALEGVAFQVRDVVLAMEEEAGVRLKVL 402 (495)
T ss_dssp -------SCCSSCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHH---HHHHHHHHHHHHHHHHHHHTTTSCCCCCE
T ss_pred -------CCCCcEEEecCCCCCCCCCCCCCCceEEEecCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 25889999999999999999999999999999999999875 59999999999999999987 57788999
Q ss_pred EEecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHH
Q 007076 517 LACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAK 596 (619)
Q Consensus 517 ~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~ 596 (619)
+++||++||++|+|++||++|+||+++...|++|+|||++|++++|.| +++++. ++....++|+| +++. +.|+++
T Consensus 403 ~~~GG~a~n~~~~q~~Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~-~~~~~~-~~~~~~~~~~P--~~~~-~~y~~~ 477 (495)
T 2dpn_A 403 KADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMAGVGAGAL-SPEDVA-GRFREAERFLP--TMPE-GRREAL 477 (495)
T ss_dssp EEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSC-CHHHHH-HHCCEEEEECC--CSCH-HHHHHH
T ss_pred EEecccccCHHHHHHHHHHhCCeeEecCCcccHHHHHHHHHHhhcCcC-CHHHHH-HhcCCCeEEcc--CCCH-HHHHHH
Confidence 999999999999999999999999999999999999999999999999 999874 55566788999 8777 899999
Q ss_pred HHHHHHHHHHHHHH
Q 007076 597 YLIFRELFEQQVSQ 610 (619)
Q Consensus 597 y~~y~~l~~~~~~~ 610 (619)
|++|+++|++++.|
T Consensus 478 ~~~~~~~~~~~~~~ 491 (495)
T 2dpn_A 478 YRRWREAVERAKGW 491 (495)
T ss_dssp HHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999988655
No 17
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=9.5e-81 Score=688.40 Aligned_cols=454 Identities=20% Similarity=0.243 Sum_probs=392.6
Q ss_pred CCeEEEEEcCCcceEEEEEc-CCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 54 RSVFLGVDVGTGSARAGLFD-ESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d-~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
++|+||||+|||++|++||| ++|+++.+.+.+++ ||.||||++||++++++++++ +. ..+|.+|||++|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~~-----g~~e~d~~~~~~~i~~~l~~~----~~-~~~I~~Igis~q 73 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKHP-----NGTSVDPSYWWSAFQEAAEQA----GG-LDDVSALAVGGQ 73 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----SSSEECTHHHHHHHHHHHHHT----TC-STTEEEEEEEEC
T ss_pred CcEEEEEEeccccEEEEEEECCCCeEEEEEEEeCC-----CCceECHHHHHHHHHHHHHhc----CC-ccCceEEEEeCC
Confidence 46899999999999999999 89999999888764 789999999999988888754 33 478999999998
Q ss_pred -ccc--ccCCCCeeeecCCCCCCccceeecccccHHHHHHHHccc------------------hhHHhhhCCCCCCCChH
Q 007076 133 -CSL--VDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN------------------SPVLQYCGGAVSPEMQP 191 (619)
Q Consensus 133 -~~~--vd~~G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~------------------~~~~~~tG~~~~~~~~~ 191 (619)
+++ ||++|+|+ +|+|+|+|.|+.++++++++.. ++++++||+++++.+++
T Consensus 74 ~~~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~ 144 (515)
T 3i8b_A 74 QHGMVILDNQGNVI---------RDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTL 144 (515)
T ss_dssp SSCBEEECTTSCBC---------SCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCSSHHHHHHHHHHHHHSSCCCTTSHH
T ss_pred cceEEEECCCCCCc---------CCcceecCCCHHHHHHHHHHhcCcccccccccccccchhHHHHHHHHCCCCCchhHH
Confidence 554 49999999 8999999999999999998752 57889999999999999
Q ss_pred HHHHHHHHhCchhHhccceeeechhHHHhhhcCCc------------ccccccccccccccccchhhccccccccCCcCC
Q 007076 192 PKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDD------------TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEAC 259 (619)
Q Consensus 192 ~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~------------~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~ 259 (619)
+||+|+++|+||+|+++.+|++++|||.|+|||+. ..++.| .+++|++||++++
T Consensus 145 ~kl~Wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~td~s--------------~As~t~l~d~~~~ 210 (515)
T 3i8b_A 145 TKVAWVAENEPENVKKIAAICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRS--------------DASGTIYYDAASN 210 (515)
T ss_dssp HHHHHHHHHCHHHHTTCSEEECHHHHHHHHHTTCCCCCTTSCCCGGGCEEEHH--------------HHTTSSSEETTTT
T ss_pred HHHHHHHHcChHHHHHHheecCHHHHHHHHhcCCCcccccccccccceeecHH--------------HhhcccCeeCCcC
Confidence 99999999999999999999999999999999982 123433 3668899999999
Q ss_pred CCCHHHHHHc-CCC-----------ccccccccccCcccccCCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhcC
Q 007076 260 GWDDEFWEEI-GLG-----------DLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGV 327 (619)
Q Consensus 260 ~W~~~ll~~~-gi~-----------~~l~~~lp~l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~ 327 (619)
+||+++|+.+ ||+ .. .|| +++++++++|. |++++|+++||++||||++|++|++|+++|+
T Consensus 211 ~W~~~ll~~~~gi~~~~~~~~~~~~~~---~LP----~i~~~~~~~G~-v~~~~A~~~Gl~~g~pV~~g~~D~~aa~lG~ 282 (515)
T 3i8b_A 211 EYRRDLIAMVLEAAEGAKAAQSHAEAI---VLP----TVLGPRDAAPV-KADPAIAGKNVEGGCLLAPGGGDNAMASLGL 282 (515)
T ss_dssp EECHHHHHHHHHHHHCHHHHHHHHHHS---BCC----EEECTTCCCSS-CCCTTTTTTTSTTCCEECCCEEHHHHHHHHT
T ss_pred ccCHHHHHhhcCCCcccccccccchHH---HCC----CCcCCcCcccC-cCHHHHHHhCCCCCCeEEEECchHHHHHhhC
Confidence 9999999998 997 43 346 68899999997 9999999999999999999999999999998
Q ss_pred cccCCCcchhhhhhhhhcccCeEEEEecccceeeeeeccccccCC-ccccccccccCCeeEEcccccchhHHHHHHHHhh
Q 007076 328 MESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKLFIPG-VWGPFWSAMVPKFWLTEGGQSATGALLDYIIENH 406 (619)
Q Consensus 328 ~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~~~~~~~~~~~~-~~~~~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~ 406 (619)
| ..+ +++++++|||+++..+++++..++. .+..++ +. ++.|+.+++++++|.+++|+++.+
T Consensus 283 -g-~~~--------------g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~-~~-~g~~~~~~~~~~gg~~l~w~~~~~ 344 (515)
T 3i8b_A 283 -G-MAV--------------GDVSISLGTSGVAAAISENPTYDLTGAVSGFA-DC-TGHYLPLACTINGSRILDAGRAAL 344 (515)
T ss_dssp -T-CCT--------------TEEEEEESSSEEEEECBSSCCCCTTSCSEEEE-CS-SSSEEEEEEESCSTHHHHHHHHHH
T ss_pred -C-CCC--------------CcEEEEechhhhhhcccCccccCCCCcEEeee-cC-CCCEEEeeecccHHHHHHHHHHHh
Confidence 5 443 6899999999999988888877653 333332 22 778999999999999999999865
Q ss_pred hhhhHHHHHHhhccCCHHHHHHHHHHhhhhccCCCCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCC-CHHHHH
Q 007076 407 VASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDS-SEKQLA 485 (619)
Q Consensus 407 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~-~~~~l~ 485 (619)
. . .|+++++++++. +++++|++|+|||.|+|+|+| +++||.|+|++..| ++.|+.
T Consensus 345 ~-------------~-~~~~l~~~a~~~---------~~g~~gl~~lP~~~Ger~P~~-~~arg~~~Gl~~~~~~~~~l~ 400 (515)
T 3i8b_A 345 G-------------V-DYDELAKLAFAS---------KPGANGITLVPYFDGERTPNR-PNATATFSGMTLANTTRENLA 400 (515)
T ss_dssp T-------------C-CHHHHHHHHHHS---------CTTGGGCEEECCTTCBTTTTB-TTCCCEEESCCTTTCSHHHHH
T ss_pred C-------------C-CHHHHHHHHHhC---------CCCCCCeEEecCCCCCcCCCC-cCcceEEecCCCCCCCHHHHH
Confidence 2 2 377888877653 358899999999999999977 99999999999999 999864
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccC
Q 007076 486 LLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYS 565 (619)
Q Consensus 486 ~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~ 565 (619)
||++||+||++|++++.|++.|.++++|+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.+.
T Consensus 401 ---RAvlEgia~~~r~~l~~l~~~g~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~ 477 (515)
T 3i8b_A 401 ---RAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSILGMDVTRPATDEYVAIGAARQAAWVLSGET 477 (515)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEECCCCHHHHHHHHHHHHHHHCCS
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhcCHHHHHHHHHHhCCceEecCCcccHHHHHHHHHHHHcCCCC
Confidence 59999999999999999999888999999999999999999999999999999999999999999999999999988
Q ss_pred CHHHHHHHhh-cCCeEEcCCCChhhHHHHHHHH
Q 007076 566 SLIEAMKAMN-AAGQVIHPSKDPKVKKYHDAKY 597 (619)
Q Consensus 566 ~~~~a~~~~~-~~~~~~~P~~~~~~~~~y~~~y 597 (619)
++.+ +. ....+|+|.++++..+.|++.|
T Consensus 478 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (515)
T 3i8b_A 478 EPPA----WQLTIDGVETGEPTEAVYEAYAKAR 506 (515)
T ss_dssp SCCC----CCCCEEEEECCCCCHHHHHHHHHHH
T ss_pred ChhH----hhhhccccCCCCccHHHHHHHHHHh
Confidence 7643 32 3356788966666666655554
No 18
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=5.3e-74 Score=628.04 Aligned_cols=448 Identities=14% Similarity=0.137 Sum_probs=355.9
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc-
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT- 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~- 132 (619)
|+|+||||+|||++|+++||++|++++..+.+++.++.+||+||||++||+++++++++++ + .+|.+|||++|
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~-~-----~~I~aIgis~~~ 78 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA-D-----HPVTTIVPVGHG 78 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTTSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT-T-----SCCCEEEEEECS
T ss_pred hceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH-h-----cCCCEEEEecCc
Confidence 4789999999999999999999999999999998777899999999999999999998886 3 57999999998
Q ss_pred ccc--ccCCCCeeeecCCCCCCccceeecccccHHHHHHHHccchhHHhhhCCCCCCC--ChHHHHHHHHHhCchhHhcc
Q 007076 133 CSL--VDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPE--MQPPKLLWVKENLQESWSMV 208 (619)
Q Consensus 133 ~~~--vd~~G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~~~~~~~tG~~~~~~--~~~~kl~Wl~~~~pe~~~~~ 208 (619)
+++ || +|+|+ +|+|+|+|.|+.++++++.+... .+++||++++++ ++++||+|+++|+||+|+++
T Consensus 79 ~~~v~~D-~G~pl---------~~ai~w~D~R~~~~~~~l~~~~~-~~~~tG~~~~~~~~~~~~kl~Wl~~~~Pe~~~~~ 147 (482)
T 3h6e_A 79 AGIAALT-DGRLA---------FPPLDYEQSIPEAVMADYRSQRD-PFARTGSPALPDGLNIGSQLWWLDQLHPDVMANA 147 (482)
T ss_dssp SCEEEEE-TTEEC---------SCCBCTTSCCCHHHHHHHHTTCC-CHHHHCCCCCSTTSSHHHHHHHHHHHSHHHHHSC
T ss_pred CCEEEEC-CCCEe---------ccccccCCcccHHHHHHHHhhCh-HHHHhCCCCCCCchhHHHHHHHHHHcCchhhhcC
Confidence 554 49 99999 89999999999999999987653 388999999997 89999999999999999999
Q ss_pred ceeeechhHHHhhhcCCcccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccccCccccc
Q 007076 209 FRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAF 288 (619)
Q Consensus 209 ~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~l~~~v~~ 288 (619)
+ |++++|||.|+|||+.. ++.|+ .+|+|++||+++++|| ++|+.+||+ .+ || ++++
T Consensus 148 ~-~l~~~dyl~~~LTG~~~-td~s~-------------~As~t~l~d~~~~~W~-~ll~~~gi~-~~---LP----~v~~ 203 (482)
T 3h6e_A 148 T-LLPWAQYWAWFLTGRAV-SEVTS-------------LGCHSDLWDPQDGDFS-PMAKRLGWA-AR---FA----PIVR 203 (482)
T ss_dssp E-EEEHHHHHHHHTTSCCC-EEHHH-------------HTTTCSSEETTTTEEC-HHHHHTTCG-GG---BC----CEEC
T ss_pred E-EEccHHHHHHHHhCCee-eecch-------------hhhccCCccCCcCcHH-HHHHHcCCH-Hh---CC----CCcC
Confidence 9 99999999999999874 34432 1457889999999999 599999998 32 46 6889
Q ss_pred CCCccCCCccHHHHHHcCCCCCCcEEEccchHHhhhhc---CcccCCCcchhhhhhhhhcccCe-EEEEecccceeeeee
Q 007076 289 PGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVG---VMESVPESVSEAKENEEEAICHR-MVLVCGTSTCHMAVS 364 (619)
Q Consensus 289 ~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg---~~g~~~~g~~~~~~~~~g~~~~~-~~~~~GTs~~~~~~~ 364 (619)
+++++|+ |++++|+++||++|+||++|++|++|+++| + ++.++ ++ +++++|||.++....
T Consensus 204 ~~~~~G~-l~~~~A~~~GL~~g~pV~~g~~D~~aa~lG~~g~-g~~~~--------------g~~~~~s~GT~~~~~~~~ 267 (482)
T 3h6e_A 204 AGDTVGA-LLPAIAERTGLSPDVQVLAGLHDSNAALLAARGF-AEIAD--------------NEATVLSTGTWFIAMRLP 267 (482)
T ss_dssp TTSEEEE-CCHHHHHHHTCCTTCEEECCEEHHHHHHHHHTTS-TTTTT--------------SSEEEEECSSSEEEEEEC
T ss_pred CCceeee-eCHHHHHHhCCCCCCEEEEeCcHHHHHHhhhhcc-CCcCC--------------CCEEEEECCceeEEEEec
Confidence 9999997 999999999999999999999999999999 7 44433 33 678999998765555
Q ss_pred c---c-ccccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhccCC
Q 007076 365 R---N-KLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNS 440 (619)
Q Consensus 365 ~---~-~~~~~~~~~~~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 440 (619)
+ + +..++.. ..++... ...|.+++...++|.+++|+++......++ .++..+.+++..
T Consensus 268 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~~g~~~~~G~~~~w~~~~~~~~~~~----------~~~~~~~~a~~~------ 329 (482)
T 3h6e_A 268 ATPVDTATLPEAR-DCLVNVD-VHGRPVPSARFMGGREIETLIEIDTRRVDI----------KPDQPALLAAVP------ 329 (482)
T ss_dssp SSCCCGGGCCGGG-TEEEEEC-TTSCEEEEEEECHHHHHHHHHCSGGGCTTC----------GGGHHHHHHTHH------
T ss_pred CccCCccccchhh-ceeeccc-cccccccchhhhhHHHHHHHHHhccccccc----------ccchhhHHHhcc------
Confidence 5 3 3233311 1111111 223567777889999999997543210000 011222222221
Q ss_pred CCccCCCCceEEcccCCCCCCCCCCCCCcEeEEcCCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHhCCCCcCEEEE
Q 007076 441 PFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQG--IAYGTRHIVEHCNAHGHKIDTLLA 518 (619)
Q Consensus 441 p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~~~Gl~~~~~~~~l~~~~rAvlEg--iaf~~~~~l~~l~~~g~~~~~I~~ 518 (619)
+++++|++|+|||+|+|+|+||+ ||+|+|++. .| ++||++|+ +||++|++++.|++. ++|++
T Consensus 330 ---~~g~~Gl~flP~l~Ger~P~~d~--rG~~~Gl~~----~~---l~RA~lE~~Gia~~~r~~l~~~~~~----~~i~~ 393 (482)
T 3h6e_A 330 ---EVLRHGRMILPTLMRGFGPYPHG--RFAWINRPE----DW---FERRAAACLYAALVADTALDLIGST----GRILV 393 (482)
T ss_dssp ---HHHHTTCEEESCSSTTCSSCTTC--CCEEESCCS----SH---HHHHHHHHHHHHHHHHHHHHHTTCC----SEEEE
T ss_pred ---ccCCCCeEEecCCCCCCCCCCCC--ceEEeCCCH----HH---HHHHHHHHHhHHHHHHHHHHHhcCC----CeEEE
Confidence 24789999999999999999986 999999999 35 46799995 999999999999753 68999
Q ss_pred ecCCcCCHHHHHHHHhh-hCCceeecCCCCccchHHHHHHHhhccccCCHHHHHHHhhcCCeEEcCCCChhhHHHHHHHH
Q 007076 519 CGGLAKNPLFLQQHADI-IGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKY 597 (619)
Q Consensus 519 ~GG~a~s~~~~Qi~Adv-lg~pV~~~~~~e~~alGAAllA~~~~G~~~~~~~a~~~~~~~~~~~~P~~~~~~~~~y~~~y 597 (619)
+||++||++|+||+||| ||+||+++...|++|+|||++|+++.-. .....+.|..+..-+..+++++
T Consensus 394 ~GG~a~s~~w~Qi~ADv~~g~pV~~~~~~e~~alGAA~lA~~a~~~------------~~~~~~~~~~~~~~~~~~~~~~ 461 (482)
T 3h6e_A 394 EGRFAEADVFVRALASLRPDCAVYTANAHNDVSFGALRLIDPGLRP------------QGELVRIEPLDTGSWADLDTYR 461 (482)
T ss_dssp ESGGGGCHHHHHHHHHHSTTSEEEEESSCCCTTGGGHHHHCTTCCC------------SSCEEECCCCCC----CHHHHH
T ss_pred eCCcccCHHHHHHHhhhcCCCeEEEcCCCchHHHHHHHHhCccccc------------ccccCcccccccccchHHHHHH
Confidence 99999999999999999 9999999999999999999999987321 1245677754412223455556
Q ss_pred HHHHHHH
Q 007076 598 LIFRELF 604 (619)
Q Consensus 598 ~~y~~l~ 604 (619)
++|++..
T Consensus 462 ~~w~~~~ 468 (482)
T 3h6e_A 462 NRWQAEV 468 (482)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666544
No 19
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=1.2e-72 Score=623.00 Aligned_cols=461 Identities=16% Similarity=0.174 Sum_probs=367.5
Q ss_pred CCCCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecc-----cccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 007076 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQ-----IWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKG 126 (619)
Q Consensus 52 m~~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~-----~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~a 126 (619)
|+++++||||+|||++|++|+|.+|+++...+.++. ..+.+||.||||++||+++.++++++... ..+|.+
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~----~~~i~~ 76 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA----GIAIDS 76 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT----TCCCCE
T ss_pred CCcceEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC----CCCceE
Confidence 667889999999999999999999998877665543 12478999999999999999999988653 357999
Q ss_pred EEEcCc-cc--cccCCCCeeeecCCCCCCccceeecccccHHHHHHHHccc--hhHHhhhCCCCCCCChHHHHHHHHHhC
Q 007076 127 VGFAAT-CS--LVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENL 201 (619)
Q Consensus 127 Igis~~-~~--~vd~~G~pl~~~~~~~~~~p~i~W~D~R~~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~ 201 (619)
|||++| ++ +||++|+|+ +|+|.|+|.|+.++++++.+.. ++++++||+++++.++++||+|+++|+
T Consensus 77 Igis~q~~~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~ 147 (489)
T 2uyt_A 77 IGIDTWGVDFVLLDQQGQRV---------GLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQ 147 (489)
T ss_dssp EEEEECSSCEEEECTTSCEE---------SCCBCTTCGGGTTHHHHHHHHHCHHHHHHHHCCCCCTTSHHHHHHHHHHHC
T ss_pred EEEecCcccEEEECCCCCCc---------cCCccccCCccHHHHHHHHHhcCHHHHHHHhCCCCCCccHHHHHHHHHhcC
Confidence 999998 55 459999999 7899999999999999997653 578999999999999999999999999
Q ss_pred chhHhccceeeechhHHHhhhcCCcccccccccccccccccchhhccccccccCCcCCCCCHHHHHHcCCCccccccccc
Q 007076 202 QESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 281 (619)
Q Consensus 202 pe~~~~~~~~~~~~dyl~~~LTG~~~~s~~s~~~~~~~~~~~~~~~as~tgl~d~~~~~W~~~ll~~~gi~~~l~~~lp~ 281 (619)
||+|+++.++++++|||.|+|||+.. ++.|+ +|+|++||+++++||+++|+.+||++.+ ||
T Consensus 148 P~~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---lP- 208 (489)
T 2uyt_A 148 PELIPHIAHALLMPDYFSYRLTGKMN-WEYTN--------------ATTTQLVNINSDDWDESLLAWSGANKAW---FG- 208 (489)
T ss_dssp GGGGGGCCEEEEHHHHHHHHHHSCCC-CBHHH--------------HGGGTCEETTTTEECHHHHHHHTCCGGG---SC-
T ss_pred chHHHHhhhccCcHHHHHHHHhCCcc-ceehh--------------hhhhcccccCcCccCHHHHHHcCCCHHH---CC-
Confidence 99999999999999999999999975 34443 5678899999999999999999999754 46
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEE-ccchHHhhhhcCcccCCCcchhhhhhhhhcccCeEEEEeccccee
Q 007076 282 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGT-SLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCH 360 (619)
Q Consensus 282 l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~-g~~D~~aa~lg~~g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~ 360 (619)
+++++++++|. ++.+ .| +|+||++ |+||++|+++|+ ++.. ++++++++|||+++
T Consensus 209 ---~i~~~~~~~G~-~~~~----~~--~g~pV~~~g~~D~~aa~~g~-g~~~--------------~g~~~~s~GTs~~~ 263 (489)
T 2uyt_A 209 ---RPTHPGNVIGH-WICP----QG--NEIPVVAVASHDTASAVIAS-PLNG--------------SRAAYLSSGTWSLM 263 (489)
T ss_dssp ---CCBCTTCEEEE-EECT----TC--CEEEEECCCCBHHHHHHHHS-CCCS--------------TTEEEEEESSSEEE
T ss_pred ---CccCCCcceee-eecc----cC--CCCcEEEECchHHHHHHhcC-CCCC--------------CCcEEEEEchHhhc
Confidence 68899999997 7532 23 7899997 889999999998 5443 36899999999998
Q ss_pred eeeeccccccCC-ccc-cccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhcc
Q 007076 361 MAVSRNKLFIPG-VWG-PFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHER 438 (619)
Q Consensus 361 ~~~~~~~~~~~~-~~~-~~~~~~~~~~y~~~g~~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 438 (619)
...++++..++. ... .++++..++.|..++.+. | .|+++.+.... +.+.|+.+.+.+ +
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g---~W~~~~~~~~~---------~~~~~~~l~~~a-~----- 323 (489)
T 2uyt_A 264 GFESQTPFTNDTALAANITNEGGAEGRYRVLKNIM--G---LWLLQRVLQER---------QINDLPALIAAT-Q----- 323 (489)
T ss_dssp EEEESSCCCSHHHHHHTCEEECCGGGCEEEEEEEC--T---THHHHHHHHHT---------TCCCHHHHHHHH-T-----
T ss_pred ccccCCCccCHHHHhhcceeecCCCCeEEEehhHh--H---HHHHHHhhccc---------chhhHHHHHHHh-c-----
Confidence 888887654431 211 233345578898887765 2 59888654211 123455554432 1
Q ss_pred CCCCccCCCCceEEcccCCCCCCCCCCCC-----CcEeEEcCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CC
Q 007076 439 NSPFVAALTEDIHVLPDFHGNRSPIADPK-----SKGIICGMT--LDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HG 510 (619)
Q Consensus 439 ~~p~~~~g~~gl~flP~l~G~r~P~~d~~-----a~g~~~Gl~--~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~-~g 510 (619)
. ++++++ +|+| ++.|||+|+ .+|.|.|+. ..|++.|+. ||++||+||++|++++.|++ .|
T Consensus 324 -~---~~~~~~-l~~p----~~~~~~~p~~~~~~~~g~~~g~~~~~~~t~~~l~---RAvlEgia~~~r~~~~~l~~~~g 391 (489)
T 2uyt_A 324 -A---LPACRF-IINP----NDDRFINPDEMCSEIQAACREMAQPIPESDAELA---RCIFDSLALLYADVLHELAQLRG 391 (489)
T ss_dssp -T---SCSSSS-CCCT----TSGGGSSCSCHHHHHHHHHHHTTCCCCCSHHHHH---HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -c---CCCcCe-eECC----CCCccCChhhhHHHHHHHHHhcCCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHhC
Confidence 1 245554 4788 577888887 488998884 788888864 69999999999999999987 57
Q ss_pred CCcCEEEEecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccccC---CHHHHHHHhhcCCeEEcCCCCh
Q 007076 511 HKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYS---SLIEAMKAMNAAGQVIHPSKDP 587 (619)
Q Consensus 511 ~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~~~---~~~~a~~~~~~~~~~~~P~~~~ 587 (619)
.++++|+++||++||++|+||+||++|+||+++. .|++++|||++|+.+.+... +++++.+.+.. .++|+| |+
T Consensus 392 ~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~-~e~~alGaa~~A~~a~~~~~~~~~~~~~~~~~~~-~~~~~P--~~ 467 (489)
T 2uyt_A 392 EDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP-VEASTLGNIGIQLMTLDELNNVDDFRQVVSTTAN-LTTFTP--NP 467 (489)
T ss_dssp CCCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC-TTHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHSC-CEEECC--CT
T ss_pred CCCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC-ccHhHHHHHHHHHHHcCccccHHHHHHHHHhhCC-CeEECC--Cc
Confidence 8899999999999999999999999999998876 79999999877777765544 44455555544 588999 89
Q ss_pred hhH-HHHHHHHHHHHHHHH
Q 007076 588 KVK-KYHDAKYLIFRELFE 605 (619)
Q Consensus 588 ~~~-~~y~~~y~~y~~l~~ 605 (619)
+++ +.|+++|++|++|.+
T Consensus 468 ~~~~~~Y~~~~~~y~~~~~ 486 (489)
T 2uyt_A 468 DSEIAHYVALIHSTRQTKE 486 (489)
T ss_dssp TSHHHHHHHHTTC------
T ss_pred chHHHHHHHHHHHhhchhh
Confidence 999 999999999998764
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.61 E-value=2.8e-15 Score=151.68 Aligned_cols=128 Identities=15% Similarity=0.114 Sum_probs=95.2
Q ss_pred ccchhHHHHHHHHhhhhhhHHHHHHhhccCCHHHHHHHHHHhhhhccCCCCccCCCCceEEcccCCCCCCCCCCCCCcEe
Q 007076 392 QSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGI 471 (619)
Q Consensus 392 ~~~~G~~l~W~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl~flP~l~G~r~P~~d~~a~g~ 471 (619)
...+|..++|+.+.+. .+ ++++++++.+. . .|+..|+|++. -+++.
T Consensus 128 a~GtG~~le~~a~~lg-------------~~-~~el~~la~~~-------------~----~p~~~~~~c~v---fa~s~ 173 (270)
T 1hux_A 128 AAGTGRFLDVMANILE-------------VK-VSDLAELGAKS-------------T----KRVAISSTCTV---FAESE 173 (270)
T ss_dssp CTTSHHHHHHHHHHHT-------------CC-TTTHHHHHTTC-------------C----SCCCCCCCSHH---HHHHH
T ss_pred chhhHHHHHHHHHHhC-------------CC-HHHHHHHHhhC-------------C----CCCCcccccch---hHhHH
Confidence 3346789999987652 22 45566554321 1 46667777763 25666
Q ss_pred EEcCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecCCCC-cc
Q 007076 472 ICGMT-LDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENE-SV 549 (619)
Q Consensus 472 ~~Gl~-~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e-~~ 549 (619)
++++. ..++++|++ |+++|++++++..+ ++..++ .++|+++||+++|+.|+|+++|++|+||.+++..+ .+
T Consensus 174 v~~l~~~g~~~~di~---~av~e~Va~~i~~~---~~~~~~-~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~ 246 (270)
T 1hux_A 174 VISQLSKGTDKIDII---AGIHRSVASRVIGL---ANRVGI-VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNG 246 (270)
T ss_dssp HHHHHHTTCCHHHHH---HHHHHHHHHHHHHH---HHTTCC-CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHH
T ss_pred HHHHhhCCCCHHHHH---HHHHHHHHHHHHHH---HhcCCC-CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHh
Confidence 77766 677888865 59999999998544 444333 47899999999999999999999999999988888 59
Q ss_pred chHHHHHHHhh
Q 007076 550 LLGAAILGAVA 560 (619)
Q Consensus 550 alGAAllA~~~ 560 (619)
|+|||++|+..
T Consensus 247 AlGAAl~A~~~ 257 (270)
T 1hux_A 247 ALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999764
No 21
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.64 E-value=8.1e-08 Score=99.33 Aligned_cols=91 Identities=20% Similarity=0.347 Sum_probs=74.8
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCccc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (619)
+|+||||+|+|++|++++|.+|+++...+.+++ .+.+++++++.+.+++++++++.+....+|.+|||+. +|
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~-------~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~-pG 77 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQKWSIETN-------ILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGT-PG 77 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-------CTTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE-SS
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC-------CCCCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEec-cc
Confidence 689999999999999999999999998877765 2467889999999999999988766567899999976 88
Q ss_pred cccCC-CCeeeecCCCCCCccceeeccc
Q 007076 135 LVDAD-GSPVSVSWNGDSRRNIIVWMDH 161 (619)
Q Consensus 135 ~vd~~-G~pl~~~~~~~~~~p~i~W~D~ 161 (619)
+||.+ |..+. .|.+.|.+.
T Consensus 78 ~vd~~~g~v~~--------~~~l~w~~~ 97 (326)
T 2qm1_A 78 SVDIEKGTVVG--------AYNLNWTTV 97 (326)
T ss_dssp EEETTTTEEEC--------BGGGTBCSC
T ss_pred ceeCCCCEEEe--------cCCCCccCC
Confidence 89765 76553 455678664
No 22
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.54 E-value=1.3e-05 Score=80.33 Aligned_cols=73 Identities=15% Similarity=0.270 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecCC-CCccchHHHHHH
Q 007076 481 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRE-NESVLLGAAILG 557 (619)
Q Consensus 481 ~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~-~e~~alGAAllA 557 (619)
+.++..+++.+++.++..++..++ +.+ .++.|+++||+++++.+.+++++.|+.||.++.. .+++|+|||+.|
T Consensus 199 ~~~~~~~~~~~~~~i~~~i~~~l~---~~~-~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 199 HREIMRVVRPVIEKMALIVKEVIK---NYD-QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT---TSC-SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---hcC-CCCEEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHHHHhcC
Confidence 455555666777777765555443 332 3678999999999999999999999999987664 458899999753
No 23
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.50 E-value=2.6e-07 Score=95.52 Aligned_cols=88 Identities=30% Similarity=0.467 Sum_probs=70.8
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCccc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (619)
+|+||||+|+|++|++++|.+|+++.+.+.++ +.+++++++.+.+.++++.++ .+|.+|||+. +|
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~-----~~i~gigi~~-pG 66 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILSTFKVAT---------PPTAEGIVDAICAAVAGASEG-----HDVEAVGIGA-AG 66 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCCCEEEEC---------CSSHHHHHHHHHHHHHHHHTT-----CCEEEEEEEE-SS
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEeeC---------CCCHHHHHHHHHHHHHHHHhh-----cCceEEEEec-cc
Confidence 58999999999999999999999998766655 357899999999999988653 4799999976 88
Q ss_pred cccCC-CCeeeecCCCCCCccceeecccccHH
Q 007076 135 LVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVK 165 (619)
Q Consensus 135 ~vd~~-G~pl~~~~~~~~~~p~i~W~D~R~~~ 165 (619)
+||.+ |.... .|.+.|.+..-.+
T Consensus 67 ~vd~~~g~v~~--------~~~l~w~~~~l~~ 90 (321)
T 3vgl_A 67 YVDDKRATVLF--------APNIDWRHEPLKD 90 (321)
T ss_dssp EECTTSSCEEE--------CSSSCCEEECHHH
T ss_pred cEeCCCCEEEe--------CCCCCCcCCCHHH
Confidence 99876 66554 4666887765443
No 24
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.48 E-value=5e-07 Score=97.20 Aligned_cols=92 Identities=15% Similarity=0.193 Sum_probs=76.0
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCccc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (619)
.|+||||+|+|++|++++|.+|+++.+.+.+++ .++++++++.+.+.+++++++.+....+|.+|||+. +|
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~-pG 178 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHELGGEVLIDTKIDIH--------EIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITL-PG 178 (429)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEEECC--------CCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEE-SS
T ss_pred CEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC--------CCCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEec-cC
Confidence 589999999999999999999999998777665 357999999999999999988766667899999976 88
Q ss_pred cccCC-CCeeeecCCCCCCccceeeccccc
Q 007076 135 LVDAD-GSPVSVSWNGDSRRNIIVWMDHRA 163 (619)
Q Consensus 135 ~vd~~-G~pl~~~~~~~~~~p~i~W~D~R~ 163 (619)
+||.+ |..+. .|.+.|.+..-
T Consensus 179 ~vd~~~g~v~~--------~~~l~w~~~~l 200 (429)
T 1z05_A 179 LVNSEQGIVLQ--------MPHYNVKNLAL 200 (429)
T ss_dssp EEETTTTEEEE--------CSSSBCSSBCH
T ss_pred cEeCCCCeEee--------cCCCCCCCCCH
Confidence 99865 76653 46667877543
No 25
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.45 E-value=4e-07 Score=96.34 Aligned_cols=92 Identities=17% Similarity=0.267 Sum_probs=74.4
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCccc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (619)
.|+||||+|+|++|++++|.+|+++...+.+++ .+++++++++.+.+.+++++++.+....+|.+|||+. +|
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~-------~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~-pG 158 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDASMNILAHEAHPLP-------SQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAA-PG 158 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-------SSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE-SS
T ss_pred CeEEEEEECCCEEEEEEECCCCCEEEEEEEccC-------CCCCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEe-ec
Confidence 589999999999999999999999988877765 2468999999999999999887654557899999976 88
Q ss_pred cccCC-CCeeeecCCCCCCccceeecccc
Q 007076 135 LVDAD-GSPVSVSWNGDSRRNIIVWMDHR 162 (619)
Q Consensus 135 ~vd~~-G~pl~~~~~~~~~~p~i~W~D~R 162 (619)
+||.+ |..+. .|.+.|.+..
T Consensus 159 ~vd~~~g~v~~--------~~~l~w~~~~ 179 (380)
T 2hoe_A 159 PIDTERGIIID--------PRNFPLSQIP 179 (380)
T ss_dssp CEETTTTEECC--------CSSCTTBTSC
T ss_pred cEECCCCEEec--------cCCCCCcCCC
Confidence 89764 76553 3555687643
No 26
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=98.44 E-value=7.3e-07 Score=91.33 Aligned_cols=81 Identities=19% Similarity=0.330 Sum_probs=60.8
Q ss_pred CCCCC--CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCE--E
Q 007076 50 PARSR--SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEV--K 125 (619)
Q Consensus 50 ~~m~~--~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I--~ 125 (619)
++|++ +|+||||+|+|++|++++|.+|+++.+.+.+.. . ..++++++++.+.+++++++++.+....+| .
T Consensus 4 ~~m~~~~~~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~-----~-~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~ 77 (305)
T 1zc6_A 4 QTMNPSIRYLIGVDGGGTGTRIRLHASDGTPLAMAEGGAS-----A-LSQGIAKSWQAVLSTLEAAFQQAGLPAAPASAC 77 (305)
T ss_dssp ----CCCCEEEEEEECSSCEEEEEEETTCCEEEEEEESCC-----C-GGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGE
T ss_pred hhhcccCCEEEEEEcCccceEEEEEcCCCCEEEEEeCCCC-----C-cccCHHHHHHHHHHHHHHHHHhcCCChhhhccc
Confidence 34553 699999999999999999999999987655321 0 246899999999999999998876666676 7
Q ss_pred EEEEcCcccccc
Q 007076 126 GVGFAATCSLVD 137 (619)
Q Consensus 126 aIgis~~~~~vd 137 (619)
+|||+. +|++|
T Consensus 78 ~igig~-pG~v~ 88 (305)
T 1zc6_A 78 AIGLGL-SGVHN 88 (305)
T ss_dssp EEEEEE-SCCCT
T ss_pred eEEEEe-cCCCc
Confidence 788764 55443
No 27
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.43 E-value=4.5e-07 Score=96.84 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=74.6
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCcc
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~ 133 (619)
..|+||||+|+|++|++++|.+|+++.+.+.+++ +++++++++.+.+++++++++.+....+|.+|||+. +
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~-p 154 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDLSSKLVVEESQELA--------LKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITL-P 154 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEECC--------SSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEE-S
T ss_pred ccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecCC--------CCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEe-e
Confidence 3589999999999999999999999988777663 467888999999999999887665567899999976 8
Q ss_pred ccccCC-CCeeeecCCCCCCccce-eecccc
Q 007076 134 SLVDAD-GSPVSVSWNGDSRRNII-VWMDHR 162 (619)
Q Consensus 134 ~~vd~~-G~pl~~~~~~~~~~p~i-~W~D~R 162 (619)
|+||.+ |..+. .|.+ .|.+..
T Consensus 155 G~vd~~~g~v~~--------~~~l~~w~~~~ 177 (406)
T 1z6r_A 155 GIIDTENGIVHR--------MPFYEDVKEMP 177 (406)
T ss_dssp SEEETTTTEEEE--------CTTCTTCSSBC
T ss_pred cCEeCCCCEEec--------CCCCCCccCCC
Confidence 889766 76653 4555 687643
No 28
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.40 E-value=6.7e-07 Score=93.26 Aligned_cols=78 Identities=21% Similarity=0.216 Sum_probs=62.1
Q ss_pred CCCCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCC-CEEEEEEc
Q 007076 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGE-EVKGVGFA 130 (619)
Q Consensus 52 m~~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~-~I~aIgis 130 (619)
||++|+||||+|+|++|++++|.+|+++.+.+.+.. .+.+++++++++.+.+++++++++.+.... +|.+|||+
T Consensus 3 ~M~~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~ 77 (347)
T 2ch5_A 3 FMAAIYGGVEGGGTRSEVLLVSEDGKILAEADGLST-----NHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLS 77 (347)
T ss_dssp SSSCEEEEEEECTTCEEEEEEETTSCEEEEEEECCC-----CHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEE
T ss_pred ccceEEEEEEcCccceEEEEEeCCCCEEEEEeCCCC-----CcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEe
Confidence 444599999999999999999999999987765321 123468999999999999999987666555 79999997
Q ss_pred Ccccc
Q 007076 131 ATCSL 135 (619)
Q Consensus 131 ~~~~~ 135 (619)
. +|+
T Consensus 78 ~-pG~ 81 (347)
T 2ch5_A 78 L-SGG 81 (347)
T ss_dssp E-TTT
T ss_pred c-cCC
Confidence 5 443
No 29
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.39 E-value=5.6e-07 Score=93.79 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=64.3
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCccc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (619)
.|+||||+|+|++|++++|.+|+++.+.+.+++ ++++++++.+.+.+++++++.+....+|.+|||+. +|
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~-pG 99 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNP---------KTYEERINLILQMCVEAAAEAVKLNCRILGVGIST-GG 99 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEECC---------SSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE-SS
T ss_pred cEEEEEEECCCEEEEEEECCCCcEEEEEEEcCC---------CCHHHHHHHHHHHHHHHHHhcccccCceEEEEEec-cc
Confidence 589999999999999999999999987766543 46888999999999988776433346799999976 88
Q ss_pred cccCC-CCee
Q 007076 135 LVDAD-GSPV 143 (619)
Q Consensus 135 ~vd~~-G~pl 143 (619)
+||.+ |..+
T Consensus 100 ~vd~~~g~v~ 109 (343)
T 2yhw_A 100 RVNPREGIVL 109 (343)
T ss_dssp EEETTTTEEE
T ss_pred CEeCCCCEEE
Confidence 89875 7665
No 30
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.36 E-value=8.1e-07 Score=91.73 Aligned_cols=90 Identities=21% Similarity=0.200 Sum_probs=71.9
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCccc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (619)
.|+||||+|+|++|++++|.+|+++...+.+++ ...+++++++.+.+.++++++. ..+|.+|||+. +|
T Consensus 19 ~~~lgidiggt~i~~~l~d~~g~il~~~~~~~~-------~~~~~~~~~~~i~~~i~~~~~~----~~~i~gigi~~-pG 86 (321)
T 3r8e_A 19 GMILGIDVGGTSVKFGLVTPEGEIQNATRFMTA-------DWVNGIGFVESMKLEIGNFLKQ----YPIVKGVGIGW-PG 86 (321)
T ss_dssp CCEEEEECCSSEEEEEEECTTCCEEEEEEEEHH-------HHHTTTCHHHHHHHHHHHHHHH----CTTCCEEEEEE-SS
T ss_pred cEEEEEEECCCEEEEEEEcCCCcEEEEEEEeCC-------CCCCHHHHHHHHHHHHHHHHhc----cCCeeEEEEEe-cc
Confidence 579999999999999999999999998887776 2457888999999999888762 46789999976 88
Q ss_pred cccCC-CCeeeecCCCCCCcccee-ecccccH
Q 007076 135 LVDAD-GSPVSVSWNGDSRRNIIV-WMDHRAV 164 (619)
Q Consensus 135 ~vd~~-G~pl~~~~~~~~~~p~i~-W~D~R~~ 164 (619)
+||.+ |..+. .|.+. |.+....
T Consensus 87 ~vd~~~g~v~~--------~~~l~~w~~~~l~ 110 (321)
T 3r8e_A 87 LVSLDRTKVIL--------LPNIPSVVNVPIV 110 (321)
T ss_dssp EECTTSCCEEE--------BTTBCCCCSCCHH
T ss_pred cEECCCCEEEe--------CCCCccccCCCHH
Confidence 99854 77764 45555 8775433
No 31
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.33 E-value=2e-06 Score=89.04 Aligned_cols=75 Identities=19% Similarity=0.254 Sum_probs=62.8
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCcccc
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~~ 135 (619)
|+||||+|+|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.++++..+. ..+.+|||+. +|+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~----~~~~gigi~~-pG~ 91 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLERVATERVPTP--------TDDYPLLLETIAGLVAKYDQEF----ACEGKIGLGL-PGM 91 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECC--------TTCHHHHHHHHHHHHHHHHHHH----TSCCEEEEEE-SEE
T ss_pred EEEEEEECCCEEEEEEEeCCCcEEEEEEecCC--------CCCHHHHHHHHHHHHHHHHHhc----CCccEEEEEe-ecc
Confidence 58999999999999999999999998877765 3488999999999999988764 2477888875 889
Q ss_pred ccCC-CCee
Q 007076 136 VDAD-GSPV 143 (619)
Q Consensus 136 vd~~-G~pl 143 (619)
||.+ |...
T Consensus 92 vd~~~g~v~ 100 (327)
T 4db3_A 92 EDADDATVL 100 (327)
T ss_dssp ECTTTCCEE
T ss_pred EeCCCCEEE
Confidence 9864 7765
No 32
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=98.29 E-value=6.7e-07 Score=91.88 Aligned_cols=86 Identities=21% Similarity=0.224 Sum_probs=67.0
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCccc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (619)
.|+||||||+|++|++++|.+|+++.+.+.+++ +.+++.+++.+.+.+++++++.+ .+|.+|||+. +|
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~~---~~i~gigi~~-pG 74 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGETLHCEKKRTA--------EVIAPGLVSGIGEMIDEQLRRFN---ARCHGLVMGF-PA 74 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEEHH--------HHHTTCHHHHHHHHHHHHHHHHT---EEEEEEEEEE-SS
T ss_pred CEEEEEEeCCCEEEEEEECCCCCEEEEEEecCc--------cccHHHHHHHHHHHHHHHHHhcC---CCeeEEEEec-cc
Confidence 479999999999999999999999998777665 33456788888888888776542 3689999976 88
Q ss_pred cccCC-CCeeeecCCCCCCccceeecc
Q 007076 135 LVDAD-GSPVSVSWNGDSRRNIIVWMD 160 (619)
Q Consensus 135 ~vd~~-G~pl~~~~~~~~~~p~i~W~D 160 (619)
+||.+ |..+. .|.+.|.+
T Consensus 75 ~vd~~~g~v~~--------~~~l~~~~ 93 (310)
T 3htv_A 75 LVSKDKRTIIS--------TPNLPLTA 93 (310)
T ss_dssp CBCTTSSCBCS--------CCSSSCCH
T ss_pred cEeCCCCEEEe--------CCCCCCcc
Confidence 99865 66653 45667765
No 33
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=98.19 E-value=1.3e-06 Score=89.21 Aligned_cols=99 Identities=23% Similarity=0.224 Sum_probs=68.4
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCcccc
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~~ 135 (619)
|+||||+|+|++|++++|.+|+++.+.+.+++ .+.+++++++++.+.+.+++++++. +.+|||+. +|+
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~~~~~------~~~igi~~-~G~ 70 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPG-----NYHNVGLTRAIENIKEAVKIAAKGE------ADVVGMGV-AGL 70 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCC-----CHHHHCHHHHHHHHHHHHHHHHTSC------CSEEEEEE-TTC
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCC-----CcccCCHHHHHHHHHHHHHHHHhcC------CCEEEEEc-CCC
Confidence 79999999999999999999999988766654 2235789999999999999887541 55677654 455
Q ss_pred ccCC-CC-eeeecCCCCCCccceeecccccHHHHH
Q 007076 136 VDAD-GS-PVSVSWNGDSRRNIIVWMDHRAVKQAE 168 (619)
Q Consensus 136 vd~~-G~-pl~~~~~~~~~~p~i~W~D~R~~~~~~ 168 (619)
|.+ |. ++...... ...|++.++|.++....+
T Consensus 71 -~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e 103 (299)
T 2e2o_A 71 -DSKFDWENFTPLASL-IAPKVIIQHDGVIALFAE 103 (299)
T ss_dssp -CSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHH
T ss_pred -CchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhc
Confidence 432 21 11000001 115788888888766543
No 34
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=98.07 E-value=8.8e-06 Score=81.55 Aligned_cols=81 Identities=20% Similarity=0.346 Sum_probs=56.9
Q ss_pred CCCeEEEEEcCCcceEEEEEcCC-CCEEEE-EEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007076 53 SRSVFLGVDVGTGSARAGLFDES-GKLLGS-ASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (619)
Q Consensus 53 ~~~~~lgIDiGTTsiKa~l~d~~-g~il~~-~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (619)
+..|+||||+|.|++|++++|.+ |+++.. .+.+++ ...+++++++.+.+.++++.++... ...+.+|||+
T Consensus 10 ~~~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~-------~~~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~igi~ 81 (267)
T 1woq_A 10 KNAPLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTP-------QPATPESVAEAVALVVAELSARPEA-PAAGSPVGVT 81 (267)
T ss_dssp -CCCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECC-------SSCCHHHHHHHHHHHHHHHHTSTTC-CCTTCCEEEE
T ss_pred CCCEEEEEEECCCEEEEEEEECCCCeEEEEEEecCCC-------ccCCHHHHHHHHHHHHHHHHHhccc-cCccceEEEE
Confidence 33479999999999999999976 777743 334443 2357888999999999888764321 1334567776
Q ss_pred CccccccCCCCee
Q 007076 131 ATCSLVDADGSPV 143 (619)
Q Consensus 131 ~~~~~vd~~G~pl 143 (619)
. +|+|| +|..+
T Consensus 82 ~-pG~v~-~g~v~ 92 (267)
T 1woq_A 82 F-PGIIQ-HGVVH 92 (267)
T ss_dssp E-SSCEE-TTEEC
T ss_pred c-cceEc-CCEEE
Confidence 5 78887 67654
No 35
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=98.06 E-value=1.1e-05 Score=82.34 Aligned_cols=82 Identities=16% Similarity=0.258 Sum_probs=60.1
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCcccc
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~~ 135 (619)
|+||||||+|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.+ ++ ..+|.+|||+. +|+
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~i~~~~----~~----~~~i~gigi~~-pG~ 67 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGEIILTKSAEIS--------GSDGDQILAEMKVFL----AE----NTDVTGIAVSA-PGY 67 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECS--------TTCHHHHHHHHHHHH----HT----CTTCCEEEEEE-SSE
T ss_pred EEEEEEeCCCeEEEEEECCCCCEEEEEEecCC--------CCCHHHHHHHHHHHH----hh----cCCeeEEEEec-Ccc
Confidence 59999999999999999999999998777754 345566666554443 32 35789999976 889
Q ss_pred ccCC-CCeeeecCCCCCCccce-eecccc
Q 007076 136 VDAD-GSPVSVSWNGDSRRNII-VWMDHR 162 (619)
Q Consensus 136 vd~~-G~pl~~~~~~~~~~p~i-~W~D~R 162 (619)
||.+ |..+. .|.+ .|.+..
T Consensus 68 vd~~~g~v~~--------~~~l~~w~~~~ 88 (297)
T 4htl_A 68 VNPKTGLITM--------GGAIRRFDNFN 88 (297)
T ss_dssp ECTTTCEEEE--------CTTCGGGTTEE
T ss_pred eeCCCCEEEe--------CCCCCCccCCC
Confidence 9865 77663 3444 477654
No 36
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=98.03 E-value=8.8e-06 Score=83.15 Aligned_cols=65 Identities=15% Similarity=0.270 Sum_probs=49.7
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCccc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (619)
+|++|||||+|++|++++|.+|+++.+.+.+++ +++++++.+.+.+ ++ .+|.+|||+. +|
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~t~----------~~~~~l~~i~~~~----~~-----~~i~gigi~~-pG 62 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGTIIDRIEFPTX----------MPDETIEXVIQYF----SQ-----FSLQAIGIGS-FG 62 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECC----------CHHHHHHHHHHHH----TT-----SCCSEEEEEE-CS
T ss_pred cEEEEEEECcceeEEEEEECCCcEEEEEEecCC----------ChHHHHHHHHHHh----cc-----CCceEEEEEe-ce
Confidence 569999999999999999999999987766543 3566665554443 22 3689999976 88
Q ss_pred cccCC
Q 007076 135 LVDAD 139 (619)
Q Consensus 135 ~vd~~ 139 (619)
+||.+
T Consensus 63 ~vd~~ 67 (302)
T 3epq_A 63 PVDND 67 (302)
T ss_dssp SEECC
T ss_pred eeccc
Confidence 99765
No 37
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=98.01 E-value=6.7e-06 Score=84.01 Aligned_cols=75 Identities=24% Similarity=0.363 Sum_probs=58.6
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCcccc
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~~ 135 (619)
|+||||+|+|++|++++|.++ ++...+.+++ ..+++++++.+.+.+++++++. ..+|.+|||+. +|+
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~-~l~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~~-pG~ 68 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR-LLSKVVVPTP--------KEGGERVAEALAEAAERAEREA---GVRGEAIGLGT-PGP 68 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS-BSCCEEEECC--------SSCHHHHHHHHHHHHHHHHHHH---TCCCSSEEEEE-SSC
T ss_pred EEEEEEEcCCEEEEEEEeCCC-cEEEEEEcCC--------CCChHHHHHHHHHHHHHHHhhc---cCCceEEEEEe-ccc
Confidence 699999999999999999884 5565566654 3445889999999999887754 35788999975 889
Q ss_pred ccCC-CCee
Q 007076 136 VDAD-GSPV 143 (619)
Q Consensus 136 vd~~-G~pl 143 (619)
||.+ |...
T Consensus 69 vd~~~g~v~ 77 (302)
T 3vov_A 69 LDFRRGVIR 77 (302)
T ss_dssp EETTTTEEC
T ss_pred EeCCCCEEE
Confidence 9865 6544
No 38
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=97.86 E-value=5.1e-05 Score=78.22 Aligned_cols=76 Identities=21% Similarity=0.377 Sum_probs=60.7
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCccc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (619)
.|+||||+|.|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.++++..+. ..+.+|||+. +|
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~----~~i~~igi~~-pG 90 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTP--------HTSYSAFLDAVCELVEEADQRF----GVKGSVGIGI-PG 90 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC--------CSCHHHHHHHHHHHHHHHHHHH----TSCCEEEEEE-SS
T ss_pred ceEEEEEECCCEEEEEEEeCCCCEEEEEEecCC--------CCCHHHHHHHHHHHHHHHHHhc----CCccEEEEEe-ee
Confidence 579999999999999999999999988777664 2367888899999998887653 2477888865 88
Q ss_pred cccCC-CCee
Q 007076 135 LVDAD-GSPV 143 (619)
Q Consensus 135 ~vd~~-G~pl 143 (619)
+||.+ |..+
T Consensus 91 ~vd~~~g~v~ 100 (327)
T 2ap1_A 91 MPETEDGTLY 100 (327)
T ss_dssp BSCCTTSCCB
T ss_pred eEECCCCEEE
Confidence 89765 6554
No 39
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=97.86 E-value=1.3e-05 Score=83.88 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=63.2
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEE-EeecccccCCCccccCHHHHHHHHHH---HHHHHHHHcCCCCCCEEEEEEc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSA-SSPIQIWKEGDCIEQSSTDIWHAICA---AVDSACSLANVDGEEVKGVGFA 130 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~-~~~~~~~~~~g~~e~dp~~~~~~~~~---~l~~~~~~~~~~~~~I~aIgis 130 (619)
.|+||||||.|+++++++| +|+++.+. +.+++ .. +++++++.+.+ .+++++ ..+|.+|||+
T Consensus 9 ~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~~~-------~~-~~~~~l~~i~~~~~~i~~~~------~~~i~gIGIa 73 (366)
T 3mcp_A 9 RIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLPAC-------AD-CLDKCLGNLVEGFKAIQAGL------PEAPVAISFA 73 (366)
T ss_dssp CEEEEEECSSSEEEEEEEE-TTEECSCCEEEECC-------TT-CHHHHHHHHHHHHHHHHTTC------SSCCCEEEEE
T ss_pred CEEEEEEECcceEEEEEEE-CCEEEEEEEEEECC-------CC-CHHHHHHHHHHHHHHHHHHh------hcCCeEEEEE
Confidence 5899999999999999999 99998776 66655 23 88888888877 444432 1579999997
Q ss_pred CccccccCC-CCeeeecCCCCCCccce-eec-ccc
Q 007076 131 ATCSLVDAD-GSPVSVSWNGDSRRNII-VWM-DHR 162 (619)
Q Consensus 131 ~~~~~vd~~-G~pl~~~~~~~~~~p~i-~W~-D~R 162 (619)
. +|+||.+ |..+. .|.+ .|. +-.
T Consensus 74 v-PG~Vd~~~G~i~~--------~~nlp~w~~~~~ 99 (366)
T 3mcp_A 74 F-PGPADYQAGIIGD--------LPNFPSFRGGVA 99 (366)
T ss_dssp C-CSSEETTTTEECC--------CTTCGGGTTCBC
T ss_pred e-cceEeCCCCEEEe--------CCCcccccCCCC
Confidence 6 8999865 76653 3555 687 543
No 40
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.70 E-value=6.9e-05 Score=75.91 Aligned_cols=69 Identities=14% Similarity=0.275 Sum_probs=52.2
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCcccc
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~~ 135 (619)
++||||+|.|++|++++|.+|+++.+.+.+++ .+++++.+.+.+.+++ .+|.+|||+. +|+
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~~~~~~~~---------~~~~~~~~~i~~~i~~---------~~i~gigi~~-pG~ 65 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILDKTSISTP---------ENLEDLLAWLDQRLSE---------QDYSGIAMSV-PGA 65 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEEEEECCC---------SSHHHHHHHHHHHHTT---------SCCSEEEEEE-SSE
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEeCC---------CCHHHHHHHHHHHHHh---------CCCcEEEEEe-cCc
Confidence 38999999999999999999999987665542 3566666665555432 4688899966 889
Q ss_pred ccCC-CCee
Q 007076 136 VDAD-GSPV 143 (619)
Q Consensus 136 vd~~-G~pl 143 (619)
||.+ |..+
T Consensus 66 vd~~~g~v~ 74 (292)
T 2gup_A 66 VNQETGVID 74 (292)
T ss_dssp ECTTTCBEE
T ss_pred ccCCCCEEE
Confidence 9865 7665
No 41
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.65 E-value=7.3e-05 Score=75.57 Aligned_cols=73 Identities=18% Similarity=0.270 Sum_probs=55.3
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCcccc
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~~ 135 (619)
|+||||+|.|++|++++|.+|+++.+.+.+++ ...+++++++.+.+.++++.++ +.+|||+. +|+
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~~-------~~~~~~~~~~~i~~~i~~~~~~-------~~~igi~~-pG~ 66 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTP-------ASQTPEALRDALSALVSPLQAH-------AQRVAIAS-TGI 66 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECC-------SSCCHHHHHHHHHHHHTTTGGG-------CSEEEEEE-SSE
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecCC-------CCCCHHHHHHHHHHHHHHHHhh-------CCEEEEEe-ccc
Confidence 58999999999999999999999988777765 1345888888888777666442 33677754 788
Q ss_pred ccCC-CCee
Q 007076 136 VDAD-GSPV 143 (619)
Q Consensus 136 vd~~-G~pl 143 (619)
||.+ |..+
T Consensus 67 vd~~~g~v~ 75 (289)
T 2aa4_A 67 IRDGSLLAL 75 (289)
T ss_dssp EETTEEECS
T ss_pred eeCCCCEEE
Confidence 8765 5544
No 42
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=97.57 E-value=4.6e-05 Score=74.21 Aligned_cols=67 Identities=9% Similarity=0.042 Sum_probs=46.2
Q ss_pred CCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCcc
Q 007076 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~ 133 (619)
+.|++|||||+|++| ++|.+|++ ..+.+++ ...+++++.+.+.+.+ ++ .++.+|||+. +
T Consensus 5 ~~~~lgiDIGGT~i~--~~d~~g~~--~~~~~t~-------~~~~~~~~~~~i~~~i----~~-----~~i~gigi~~-p 63 (226)
T 3lm2_A 5 DQTVLAIDIGGSHVK--IGLSTDGE--ERKVESG-------KTMTGPEMVAAVTAMA----KD-----MTYDVIAMGY-P 63 (226)
T ss_dssp GCCEEEEEECSSEEE--EEETTTCC--EEEEECC-------TTCCHHHHHHHHHHHT----TT-----CCCSEEEEEE-S
T ss_pred CCEEEEEEECCCEEE--EEECCCCE--EEEEECC-------CCCCHHHHHHHHHHHH----Hh-----CCCCEEEEEE-E
Confidence 357999999999999 57888886 2344443 2456776666555443 32 2688899976 8
Q ss_pred ccccCCCC
Q 007076 134 SLVDADGS 141 (619)
Q Consensus 134 ~~vd~~G~ 141 (619)
|+||.++.
T Consensus 64 G~Vd~~~~ 71 (226)
T 3lm2_A 64 GPVVHNKP 71 (226)
T ss_dssp SCEETTEE
T ss_pred eEEECCeE
Confidence 89987643
No 43
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.39 E-value=0.00031 Score=70.40 Aligned_cols=72 Identities=21% Similarity=0.244 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecCC-CCccchHHHHHHHh
Q 007076 481 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRE-NESVLLGAAILGAV 559 (619)
Q Consensus 481 ~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~-~e~~alGAAllA~~ 559 (619)
++|++. +++++++-.+..... +. ..+++|+++||.++|+.+++.+++.+|+++.++.. .+.+|+|||++|..
T Consensus 182 ~~di~a---~~~~~v~~~l~~~~~---~~-~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~ 254 (276)
T 4ehu_A 182 IEDIVA---GIHTSVAKRVSSLVK---RI-GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFD 254 (276)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHH---HH-CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHHHHHHHHHHH---hc-ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHH
Confidence 456654 888888765544332 21 24578999999999999999999999999998874 45789999999864
No 44
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=97.36 E-value=0.00044 Score=71.42 Aligned_cols=67 Identities=24% Similarity=0.135 Sum_probs=46.1
Q ss_pred CCeEEEEEcCCcceEEEEEc-CCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 54 RSVFLGVDVGTGSARAGLFD-ESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d-~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
+.|+||||||.|++|++++| .+|+++...+.++.. ..+ +.+.+++++++.+ .+|.+|||+.
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~~~~-------~~~-------~~~~i~~~~~~~~---~~i~gigi~~- 74 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGEISQAKTYSGLD-------YPS-------LEAVIRVYLEEHK---VEVKDGCIAI- 74 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-------CSC-------HHHHHHHHHHHSC---CCCCEEEEEE-
T ss_pred CCEEEEEEechhheEEEEEECCCCcEEEEEEecCCC-------cCC-------HHHHHHHHHHhcC---CCccEEEEEE-
Confidence 46899999999999999999 589988765554421 112 2334445555432 3688899966
Q ss_pred cccccC
Q 007076 133 CSLVDA 138 (619)
Q Consensus 133 ~~~vd~ 138 (619)
+|+||.
T Consensus 75 pG~vd~ 80 (332)
T 1sz2_A 75 ACPITG 80 (332)
T ss_dssp SSCCCS
T ss_pred eCceeC
Confidence 888973
No 45
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.27 E-value=0.00034 Score=70.78 Aligned_cols=66 Identities=21% Similarity=0.171 Sum_probs=49.4
Q ss_pred EEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007076 57 FLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (619)
Q Consensus 57 ~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (619)
+||||+|+|++|++++| +|+++.+.+.+... ....+++.+++.+.+.++++.. ....+|.+|||+.
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~il~~~~~~~~~-----~~~~~~~~~~~~i~~~i~~~~~---~~~~~i~~igig~ 67 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGKSLGRFQTSGIN-----PFQQDRNEIDTALRSEVLPAIG---QKASSIRAVYFYG 67 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEECCC-----TTTSCHHHHHHHHTTTTHHHHT---TSTTTCCEEEEEE
T ss_pred EEEEEeCccceEEEEEe-CCeEEEEEECCCCC-----cccCCHHHHHHHHHHHHHHHhC---CCcccccEEEEEC
Confidence 79999999999999999 99999877654310 0134788888888888876542 2345688888864
No 46
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=97.25 E-value=0.00028 Score=74.15 Aligned_cols=76 Identities=21% Similarity=0.138 Sum_probs=56.1
Q ss_pred CCeEEEEEcCCcceEEEEEcC----CCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 007076 54 RSVFLGVDVGTGSARAGLFDE----SGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~----~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgi 129 (619)
+.|+||||+|+|++|++++|. +|+++...+. ++ ..+++.+.+.+.+.++++.... ..+|.+|||
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~-~~--------~~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi 95 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYS-MK--------RKDITEIIEFFNEIIELMPASV---MKRVKAGVI 95 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEE-CT--------TCBGGGHHHHHHHHHHHSCHHH---HTTEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeee-cC--------CCCHHHHHHHHHHHHHHHhhcc---cccccEEEE
Confidence 468999999999999999998 8988876541 22 1356677777777776654321 246889999
Q ss_pred cCccccccCCCCee
Q 007076 130 AATCSLVDADGSPV 143 (619)
Q Consensus 130 s~~~~~vd~~G~pl 143 (619)
+. +|+||. |...
T Consensus 96 ~~-pG~vd~-g~v~ 107 (373)
T 2q2r_A 96 NV-PGPVTG-GAVG 107 (373)
T ss_dssp EE-SSCEET-TTEE
T ss_pred Ee-eccccC-CEEe
Confidence 65 888887 7655
No 47
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=97.17 E-value=0.00026 Score=74.56 Aligned_cols=80 Identities=10% Similarity=0.100 Sum_probs=52.9
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHH---HHHHHHHHHHcCCCCCCEEEEEEcC
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAI---CAAVDSACSLANVDGEEVKGVGFAA 131 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~---~~~l~~~~~~~~~~~~~I~aIgis~ 131 (619)
+++||||+|+|++|++++|.+ +++...+.+++... ..+++++.+.+ .+.+.+++++.+....+|.+| |+.
T Consensus 2 ~~vlgidiGgt~ik~al~d~~-~il~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI-i~~ 74 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE-RMVKMQNFSHSPDE-----LGRFQKILDQLEFREKIARQFVEETGYSLSSFSAF-VSR 74 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT-EEEEEEEEECCHHH-----HHTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE-EEE
T ss_pred CeEEEEECCccceeEEEEecc-hheeeeecccCccc-----ccchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE-Eec
Confidence 479999999999999999976 88887777664210 00122233333 666667766554444578888 754
Q ss_pred ccccccCC-CCe
Q 007076 132 TCSLVDAD-GSP 142 (619)
Q Consensus 132 ~~~~vd~~-G~p 142 (619)
+|+||.. |..
T Consensus 75 -pG~vd~~~G~~ 85 (381)
T 1saz_A 75 -GGLLDPIPGGV 85 (381)
T ss_dssp -CCSCSCBCSSE
T ss_pred -CCCCCCCCCce
Confidence 7888754 653
No 48
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.14 E-value=0.0047 Score=63.79 Aligned_cols=75 Identities=20% Similarity=0.177 Sum_probs=58.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCcCEEEEecC-CcCCHHHHHHHHhhhC------CceeecCCCC-c
Q 007076 478 DSSEKQLALLYLATVQGIAYGTRHIVEHC-NAHGHKIDTLLACGG-LAKNPLFLQQHADIIG------CPIILPRENE-S 548 (619)
Q Consensus 478 ~~~~~~l~~~~rAvlEgiaf~~~~~l~~l-~~~g~~~~~I~~~GG-~a~s~~~~Qi~Advlg------~pV~~~~~~e-~ 548 (619)
...++|+++ +++.+|+..+..+.-.. ++.++ ++|+++|| .++|+..+++++..++ +++.+++.++ .
T Consensus 275 ~~~~eDIa~---gll~sVa~~I~~lA~l~A~~~~i--~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~ 349 (360)
T 2i7n_A 275 SISKEDLAR---ATLVTITNNIGSIARMCALNENI--DRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYF 349 (360)
T ss_dssp TCCHHHHHH---HHHHHHHHHHHHHHHHHHHHHTC--CCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCH
T ss_pred CCCHHHHHH---HHHHHHHHHHHHHHHHHHHHcCC--CeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHH
Confidence 446788765 99999999887764322 23343 47999999 9999999999999985 6887777554 8
Q ss_pred cchHHHHHH
Q 007076 549 VLLGAAILG 557 (619)
Q Consensus 549 ~alGAAllA 557 (619)
+|+|||+.+
T Consensus 350 GAlGAaL~~ 358 (360)
T 2i7n_A 350 GAVGALLEL 358 (360)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 899999975
No 49
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=97.02 E-value=0.00078 Score=75.38 Aligned_cols=85 Identities=20% Similarity=0.259 Sum_probs=66.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecC-CCCccchHHHHHHH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 558 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~e~~alGAAllA~ 558 (619)
++.++..+.+.+++.+.-.+++.++...-....++.|+++||+++.|.+.+++.+.||.++.+.. ..++.|+|||+.|+
T Consensus 301 tr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~ 380 (605)
T 4b9q_A 301 TRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp EHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHH
Confidence 46777777778888887777766654322223578999999999999999999999999887644 56788999999998
Q ss_pred hhcccc
Q 007076 559 VAAKRY 564 (619)
Q Consensus 559 ~~~G~~ 564 (619)
.-.|..
T Consensus 381 ~l~~~~ 386 (605)
T 4b9q_A 381 VLTGDV 386 (605)
T ss_dssp HHHTSS
T ss_pred HhcCCC
Confidence 765543
No 50
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=96.99 E-value=0.0018 Score=69.51 Aligned_cols=73 Identities=16% Similarity=0.243 Sum_probs=50.5
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCE---EEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCC--EEEEEE
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKL---LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEE--VKGVGF 129 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~i---l~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~--I~aIgi 129 (619)
..+||||+|+|++|++++|.+|++ +...+.++|.. ...-+++++++.+.+++++++++.+....+ +.||++
T Consensus 61 G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~----~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~lGi~f 136 (457)
T 2yhx_A 61 GSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAM----STTAIPSDLWGNXAXSNAAFSSXEFSSXAGSVPLGFTF 136 (457)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTT----TSCSCTHHHHHHHHHHHHHHHHHHTSSCSSCEEEEEEC
T ss_pred ceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCc----cCCCCHHHHHHHHHHHHHHHHhhcccccccccceeeEE
Confidence 458999999999999999999988 44444444411 012267999999999999998764322223 345555
Q ss_pred cC
Q 007076 130 AA 131 (619)
Q Consensus 130 s~ 131 (619)
+.
T Consensus 137 s~ 138 (457)
T 2yhx_A 137 XE 138 (457)
T ss_dssp CS
T ss_pred EE
Confidence 43
No 51
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.99 E-value=0.0011 Score=69.72 Aligned_cols=80 Identities=18% Similarity=0.251 Sum_probs=62.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhh-CCceeec-CCCCccchHHHHHH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILP-RENESVLLGAAILG 557 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl-g~pV~~~-~~~e~~alGAAllA 557 (619)
++.++..+++.+++.+.-.+++.++........++.|+++||+++.+.+.+.+.+.| +.+|... +..++.|+|||+.|
T Consensus 311 ~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 390 (394)
T 3qfu_A 311 TRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQA 390 (394)
T ss_dssp EHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 466776667777887776666666544322235789999999999999999999999 8888766 45678899999998
Q ss_pred Hh
Q 007076 558 AV 559 (619)
Q Consensus 558 ~~ 559 (619)
+.
T Consensus 391 ~~ 392 (394)
T 3qfu_A 391 GV 392 (394)
T ss_dssp HH
T ss_pred Hh
Confidence 74
No 52
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=96.96 E-value=0.0011 Score=70.22 Aligned_cols=81 Identities=14% Similarity=0.175 Sum_probs=60.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceee---------cCCCCccc
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIIL---------PRENESVL 550 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~---------~~~~e~~a 550 (619)
++.++..+.+.+++.+.-.+++.++........++.|+++||+++.+.+.+++.+.|+.++.+ .+..++.|
T Consensus 312 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava 391 (409)
T 4gni_A 312 NRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQA 391 (409)
T ss_dssp EHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHH
Confidence 466776666677777766666555543211235789999999999999999999999987533 34667899
Q ss_pred hHHHHHHHhh
Q 007076 551 LGAAILGAVA 560 (619)
Q Consensus 551 lGAAllA~~~ 560 (619)
+|||+.|+.-
T Consensus 392 ~GAa~~~~~~ 401 (409)
T 4gni_A 392 RGAALQASLI 401 (409)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhhh
Confidence 9999998753
No 53
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=96.94 E-value=0.00019 Score=72.63 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=34.8
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (619)
|+||||+|+|++|++++| +|+++.+.+.+.... ...+++.+++.+.+++++++. ..+|.+|||+.
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~il~~~~~~~~~~-----~~~~~~~~~~~i~~~i~~~~~-----~~~i~~igig~ 65 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGAVIKRLGTKGINP-----FFQSEEEIQQKLTASLLPQLP-----EGKFNAVYFYG 65 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSSEEEEEEECCCCT-----TTSCSTTTTTTTTC------------------CEEEC
T ss_pred CEEEEEeccccEEEEEEc-CCeEEEEEECCCCCc-----ccCCHHHHHHHHHHHHHHhcC-----cccccEEEEEc
Confidence 379999999999999999 999998776543210 112345555555666655542 24677888865
No 54
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.92 E-value=0.0012 Score=69.78 Aligned_cols=82 Identities=17% Similarity=0.247 Sum_probs=62.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhh-CCceeecC-CCCccchHHHHHH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILPR-ENESVLLGAAILG 557 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl-g~pV~~~~-~~e~~alGAAllA 557 (619)
++.++..+++.+++.+.-.+++.++........++.|+++||+++.+.+.+++.+.| +.+|.... ..++.|+|||+.|
T Consensus 319 ~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 398 (404)
T 3i33_A 319 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 398 (404)
T ss_dssp EHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 456776666677777776666666543222235789999999999999999999999 78887664 5568899999999
Q ss_pred Hhhc
Q 007076 558 AVAA 561 (619)
Q Consensus 558 ~~~~ 561 (619)
+.-.
T Consensus 399 ~~l~ 402 (404)
T 3i33_A 399 AILI 402 (404)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8643
No 55
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=96.92 E-value=0.0015 Score=65.35 Aligned_cols=64 Identities=13% Similarity=0.238 Sum_probs=46.3
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
|+||||+|||++|++++|++++++.....+. |... + ...+.+++++++++....++..++.++.
T Consensus 2 ~~lGID~GsT~tk~av~d~~~~il~~~~~~~------g~~~---e----~a~~vl~~~~~~a~~~~~~~~~~a~t~~ 65 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNGEDIVASETISS------GTGT---T----GPSRVLEKLYGKTGLAREDIKKVVVTGY 65 (276)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEESC------CTTS---S----HHHHHHHHHHHHHCCCGGGEEEEEEEST
T ss_pred eEEEEEcCccEEEEEEEECCCeEEEEEEecC------CCCH---H----HHHHHHHHHHHHCCCcchhccccccCch
Confidence 6999999999999999999999987654332 1111 1 1234567777777777788888888764
No 56
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=96.81 E-value=0.003 Score=67.83 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=53.4
Q ss_pred CeEEEEEcCCcceEEEEEcCCC-CE---EEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007076 55 SVFLGVDVGTGSARAGLFDESG-KL---LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g-~i---l~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (619)
..++|||+|+|++|+++++.+| +- +...+.++|.. ....+.+++|+.+.++|++++++.+... +...||++
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip~~----~~~~~~~~lfd~Ia~~i~~~l~~~~~~~-~~~~lG~t 142 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPAE----KMSGSGTELFKYIAETLADFLENNGMKD-KKFDLGFT 142 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCTT----TTTSBHHHHHHHHHHHHHHHHHHTTCCS-SCEEEEEE
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecCCc----ccCCCHHHHHHHHHHHHHHHHHhcCCCc-cccceEEE
Confidence 4689999999999999999888 51 11223333311 1234679999999999999998765433 33667776
Q ss_pred CccccccC
Q 007076 131 ATCSLVDA 138 (619)
Q Consensus 131 ~~~~~vd~ 138 (619)
. .+++|.
T Consensus 143 f-sfPv~q 149 (451)
T 1bdg_A 143 F-SFPCVQ 149 (451)
T ss_dssp E-CSCEEE
T ss_pred E-eeEecc
Confidence 4 556653
No 57
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=96.66 E-value=0.0022 Score=67.36 Aligned_cols=80 Identities=21% Similarity=0.276 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecC-CCCccchHHHHHHH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 558 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~e~~alGAAllA~ 558 (619)
++.++..+++..++.+.-.+++.++...-....++.|+++||+++.+.+.+.+.+.|+.+|.... ..++.|+|||+.|+
T Consensus 301 t~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 301 TRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (383)
T ss_dssp EHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTT
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHH
Confidence 45666655666666665544444433211123578999999999999999999999999887655 45688999999876
Q ss_pred h
Q 007076 559 V 559 (619)
Q Consensus 559 ~ 559 (619)
.
T Consensus 381 ~ 381 (383)
T 1dkg_D 381 V 381 (383)
T ss_dssp T
T ss_pred h
Confidence 3
No 58
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.53 E-value=0.0052 Score=61.69 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=58.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCcCEEEEecC-CcCCHHHHHHHHhh---hCCceeecCCCC-ccch
Q 007076 478 DSSEKQLALLYLATVQGIAYGTRHIVEHC-NAHGHKIDTLLACGG-LAKNPLFLQQHADI---IGCPIILPRENE-SVLL 551 (619)
Q Consensus 478 ~~~~~~l~~~~rAvlEgiaf~~~~~l~~l-~~~g~~~~~I~~~GG-~a~s~~~~Qi~Adv---lg~pV~~~~~~e-~~al 551 (619)
...++|+++ +++.+++..+..+.... ++.+ +++|+++|| .+.|+.+++.+++. .+.++.+++.++ .+|+
T Consensus 206 g~~~eDIaa---sl~~sV~~~I~~la~~~a~~~~--i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAl 280 (287)
T 2ews_A 206 DFTPSNKLA---AVIGVVGEVVTTMAITVAREFK--TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAI 280 (287)
T ss_dssp CCCHHHHHH---HHHHHHHHHHHHHHHHHHHHTT--CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHH
T ss_pred CCCHHHHHH---HHHHHHHHHHHHHHHHHHHhCC--CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHH
Confidence 446888765 99999988776665432 3334 457999999 89999999999998 588898887655 6899
Q ss_pred HHHHHH
Q 007076 552 GAAILG 557 (619)
Q Consensus 552 GAAllA 557 (619)
|||+.|
T Consensus 281 GAaL~~ 286 (287)
T 2ews_A 281 GALYLE 286 (287)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999864
No 59
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=96.51 E-value=0.0042 Score=61.73 Aligned_cols=63 Identities=17% Similarity=0.278 Sum_probs=46.0
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (619)
++|+||||.|++|.++||. ++++...+.+++ ....+++. ..++++++..+.+..+|.+|+||+
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~~l~~~~r~~T~--------~~t~de~~----~~l~~ll~~~~~~~~~I~~iiISS 65 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-DEIKLRFRHTSK--------VSTSDELG----IFLKSVLRENNCSPETIRKIAICS 65 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-TEEEEEEEEECS--------CCCHHHHH----HHHHHHHHTTTCCGGGCCEEEEEE
T ss_pred eEEEEEECCCeEEEEEEEC-CEEEEEEEecCC--------CCCHHHHH----HHHHHHHHHcCCChhhceEEEEec
Confidence 3899999999999999986 577777766654 23455554 345556665555566899999986
No 60
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=96.19 E-value=0.0068 Score=70.88 Aligned_cols=80 Identities=18% Similarity=0.276 Sum_probs=53.2
Q ss_pred CeEEEEEcCCcceEEEEEcCC-CC--EEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007076 55 SVFLGVDVGTGSARAGLFDES-GK--LLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~-g~--il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (619)
..+||||+|+|++|+++++.+ |+ ++...+..+.+-.. ....+.+++|+.+.++|.++++..+...+.+ .|||+.
T Consensus 526 G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~ip~~--~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~l-~lG~tf 602 (917)
T 1cza_N 526 GDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIE--IMQGTGEELFDHIVSCISDFLDYMGIKGPRM-PLGFTF 602 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECCCHH--HHTSBHHHHHHHHHHHHHHHHHHHTCCSSCC-EEEEEE
T ss_pred eEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEecCcc--cccCCHHHHHHHHHHHHHHHHHHcCCCccce-eEEEEe
Confidence 468999999999999999975 64 65433333221000 0123568899999999999998765544444 677764
Q ss_pred ccccccC
Q 007076 132 TCSLVDA 138 (619)
Q Consensus 132 ~~~~vd~ 138 (619)
.+++|.
T Consensus 603 -sfPv~q 608 (917)
T 1cza_N 603 -SFPCQQ 608 (917)
T ss_dssp -CSCEEE
T ss_pred -eccccc
Confidence 455543
No 61
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=96.19 E-value=0.0085 Score=70.03 Aligned_cols=73 Identities=12% Similarity=0.195 Sum_probs=51.1
Q ss_pred CeEEEEEcCCcceEEEEEcCCCC----E-EEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCC-EEEEE
Q 007076 55 SVFLGVDVGTGSARAGLFDESGK----L-LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEE-VKGVG 128 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~----i-l~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~-I~aIg 128 (619)
..+||||+|+|++|++++|.+|+ + +...+.++|.. ..+.+.+++++.+.+++++++++.+...+. ..||+
T Consensus 78 G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~ip~~----~~~~~~~~lf~~Ia~~i~~~l~~~~~~~~~~~lGi~ 153 (917)
T 1cza_N 78 GDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPEN----IVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFT 153 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECCCHH----HHSSBHHHHHHHHHHHHHHHHHHHTCTTSCCCEEEE
T ss_pred ceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEECCcc----cccCCHHHHHHHHHHHHHHHHHhcCCCCCcccEEEE
Confidence 45899999999999999998876 4 45555555421 012367899999999999998765432222 45666
Q ss_pred EcC
Q 007076 129 FAA 131 (619)
Q Consensus 129 is~ 131 (619)
++.
T Consensus 154 fs~ 156 (917)
T 1cza_N 154 FSF 156 (917)
T ss_dssp ECS
T ss_pred Ecc
Confidence 654
No 62
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=96.13 E-value=0.0063 Score=66.51 Aligned_cols=83 Identities=22% Similarity=0.239 Sum_probs=60.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecC-CCCccchHHHHHHH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 558 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~e~~alGAAllA~ 558 (619)
++.++..+++.+++.+.-.+++.++...-....++.|+++||+++.|.+.+.+.+.|+.++.... ..++.|+|||+.|+
T Consensus 270 tr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~ 349 (509)
T 2v7y_A 270 TRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGG 349 (509)
T ss_dssp EHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHH
Confidence 46666656666666666555555544321113578999999999999999999999998876544 56688999999998
Q ss_pred hhcc
Q 007076 559 VAAK 562 (619)
Q Consensus 559 ~~~G 562 (619)
.-.|
T Consensus 350 ~l~~ 353 (509)
T 2v7y_A 350 VIAG 353 (509)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 6444
No 63
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.91 E-value=0.018 Score=63.73 Aligned_cols=77 Identities=22% Similarity=0.318 Sum_probs=55.1
Q ss_pred CeEEEEEcCCcceEEEEEc-CCCCEEEEEEeeccccc-CCC------ccc---cCHHH----HHHHHHHHHHHHHHHcCC
Q 007076 55 SVFLGVDVGTGSARAGLFD-ESGKLLGSASSPIQIWK-EGD------CIE---QSSTD----IWHAICAAVDSACSLANV 119 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d-~~g~il~~~~~~~~~~~-~~g------~~e---~dp~~----~~~~~~~~l~~~~~~~~~ 119 (619)
.|-++||||||.+.+.|+| .+|++++..+.-.|... ..+ ++. ...+. +.+.+.+++.++.++.++
T Consensus 206 ~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~i 285 (631)
T 3zyy_X 206 VFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHGV 285 (631)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999 78999999887776432 221 221 11223 444555555566666688
Q ss_pred CCCCEEEEEEcC
Q 007076 120 DGEEVKGVGFAA 131 (619)
Q Consensus 120 ~~~~I~aIgis~ 131 (619)
++++|..|.|++
T Consensus 286 ~~~~I~~~~v~G 297 (631)
T 3zyy_X 286 EKKEIMAAVVAG 297 (631)
T ss_dssp CGGGEEEEEEEE
T ss_pred CHHHeeEEEEEc
Confidence 899999999986
No 64
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=95.88 E-value=0.0079 Score=67.98 Aligned_cols=83 Identities=18% Similarity=0.302 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecC-CCCccchHHHHHHH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 558 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~e~~alGAAllA~ 558 (619)
++.++..+...+++.+.-.++..++...-..-.++.|+++||+++.|.+.+++.+.||+++.... ..++.|+|||+.|+
T Consensus 302 tr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 302 SREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICA 381 (675)
T ss_dssp EHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHH
Confidence 46666655566666666555555543321112578999999999999999999999999886544 56788999999998
Q ss_pred hhcc
Q 007076 559 VAAK 562 (619)
Q Consensus 559 ~~~G 562 (619)
.-.|
T Consensus 382 ~ls~ 385 (675)
T 3d2f_A 382 IHSP 385 (675)
T ss_dssp HTCS
T ss_pred HhCC
Confidence 6544
No 65
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=95.73 E-value=0.024 Score=60.93 Aligned_cols=73 Identities=21% Similarity=0.280 Sum_probs=48.1
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCE-EE--EEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEEc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKL-LG--SASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDG-EEVKGVGFA 130 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~i-l~--~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~-~~I~aIgis 130 (619)
..+|+||+|+|++|+++++.+|+- .. ..+.++|.. ...-..+++|+.+.++|.+.+++..... .+...+|++
T Consensus 80 G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~Ip~~----~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~l~lGft 155 (485)
T 3o8m_A 80 GDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDH----LRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGFT 155 (485)
T ss_dssp EEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTT----GGGSBHHHHHHHHHHHHHHHHHHHCTTCCSSCEEEEEE
T ss_pred eEEEEEEecCCeEEEEEEEECCCCceEEEEEEEecCch----hccCCHHHHHHHHHHHHHHHHHHhcccccccccceEEE
Confidence 368999999999999999977651 11 112222211 1122378999999999999998754321 345566765
Q ss_pred C
Q 007076 131 A 131 (619)
Q Consensus 131 ~ 131 (619)
.
T Consensus 156 f 156 (485)
T 3o8m_A 156 F 156 (485)
T ss_dssp E
T ss_pred E
Confidence 4
No 66
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.56 E-value=0.018 Score=56.56 Aligned_cols=61 Identities=21% Similarity=0.372 Sum_probs=44.2
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (619)
++|+||+|.|++|.++|| +++++...+.+++ .....+++...+.+.++. ...+|.+|+||+
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~l~~~~r~~T~-------~~~t~de~~~~l~~l~~~-------~~~~i~~i~IsS 64 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGKTFRRWRLSTG-------VFQTEDELFSHLHPLLGD-------AMREIKGIGVAS 64 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSSSCEEEEEECC-------TTCCHHHHHHHHHHHHGG-------GGGGEEEEEEEE
T ss_pred eEEEEEECCCeEEEEEEE-CCEEEEEEEecCC-------CCCCHHHHHHHHHHHHhh-------ccccCCEEEEEc
Confidence 479999999999999998 5677776666665 245567777665555433 135789999976
No 67
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.50 E-value=0.015 Score=64.10 Aligned_cols=83 Identities=16% Similarity=0.236 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhC-Cceeec-CCCCccchHHHHHH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG-CPIILP-RENESVLLGAAILG 557 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg-~pV~~~-~~~e~~alGAAllA 557 (619)
++.++..+...+++.+.-.+++.++...-....++.|+++||+++.|.+.+.+.+.|+ +++... ...++.|+|||+.|
T Consensus 298 tr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a 377 (554)
T 1yuw_A 298 TRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 377 (554)
T ss_dssp EHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHH
Confidence 3555554445555555544444443321111257899999999999999999999996 777554 45678899999999
Q ss_pred Hhhcc
Q 007076 558 AVAAK 562 (619)
Q Consensus 558 ~~~~G 562 (619)
+.-.|
T Consensus 378 ~~l~~ 382 (554)
T 1yuw_A 378 AILSG 382 (554)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 86544
No 68
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=95.06 E-value=0.016 Score=59.74 Aligned_cols=76 Identities=16% Similarity=0.097 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----C-c-CEEEEecCCcCCHHHHHHHHhhhCCceeecC-CCCccchH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGH----K-I-DTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLG 552 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~----~-~-~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~e~~alG 552 (619)
+++++..+++..++.+.-.+++.++ +.+. . + +.|+++||+++.+.+.+.+.+.|+.||.+.. ..+++|+|
T Consensus 242 ~~~~~~~~~~~~~~~i~~~i~~~l~---~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~G 318 (344)
T 1jce_A 242 KGGEVREALRSVVVAIVESVRTTLE---KTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKG 318 (344)
T ss_dssp EHHHHHHHTHHHHHHHHHHHHHHHH---TSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHH---hCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHH
Confidence 3566665566666666655555444 3321 1 2 5799999999999999999999999998774 55688999
Q ss_pred HHHHHH
Q 007076 553 AAILGA 558 (619)
Q Consensus 553 AAllA~ 558 (619)
||++|.
T Consensus 319 aa~~a~ 324 (344)
T 1jce_A 319 AGMVLD 324 (344)
T ss_dssp HHHGGG
T ss_pred HHHHHh
Confidence 999875
No 69
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=94.95 E-value=0.0064 Score=67.93 Aligned_cols=80 Identities=23% Similarity=0.300 Sum_probs=55.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCcCEEEEecCCcCCHHHHHHHHhhhCCceeecC-CCCccchHHHH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHG---HKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAI 555 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g---~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~-~~e~~alGAAl 555 (619)
++.++..+...+++.+.-.+++. |++.+ ..++.|+++||+++.|.+.+++.+.||.++.... ..++.|+|||+
T Consensus 301 tr~~fe~l~~~~~~~i~~~i~~~---L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~ 377 (605)
T 2kho_A 301 TRAKLESLVEDLVNRSIEPLKVA---LQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAV 377 (605)
T ss_dssp EHHHHHTTCCSTTGGGTSHHHHH---HHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHH---HHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHH
Confidence 34554433334444444333333 33433 3578999999999999999999999998875544 56788999999
Q ss_pred HHHhhcc
Q 007076 556 LGAVAAK 562 (619)
Q Consensus 556 lA~~~~G 562 (619)
.|+.-.|
T Consensus 378 ~a~~l~~ 384 (605)
T 2kho_A 378 QGGVLTG 384 (605)
T ss_dssp HHTTTTT
T ss_pred HHHHhcC
Confidence 9976444
No 70
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=94.86 E-value=0.052 Score=53.90 Aligned_cols=63 Identities=21% Similarity=0.273 Sum_probs=44.5
Q ss_pred EEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007076 57 FLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (619)
Q Consensus 57 ~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (619)
+|.||+|.|++|.++|| +++++...+.+++ .....+++... ++++++..+++..+|.+|.||+
T Consensus 2 lL~IDIGNT~ik~gl~~-~~~l~~~~r~~T~-------~~~t~de~~~~----l~~ll~~~~~~~~~i~~iiISS 64 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EGELRQHWRMETD-------RHKTEDEYGML----VKQLLEHEGLSFEDVKGIIVSS 64 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEECC-------TTCCHHHHHHH----HHHHHHHTTCCGGGCCEEEEEE
T ss_pred EEEEEECcCcEEEEEEE-CCEEEEEEEecCC-------CcCCHHHHHHH----HHHHHHHcCCCcccCcEEEEEc
Confidence 68999999999999998 5567776666654 23445666554 4455555555556788998876
No 71
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=94.63 E-value=0.12 Score=54.70 Aligned_cols=65 Identities=17% Similarity=0.222 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecC
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNA------HGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR 544 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~------~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~ 544 (619)
++.++..+.++.+|-+.-.+++.++...- ....+..|+++||+|+-+.+.+++++.||+||++..
T Consensus 290 s~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~ 360 (419)
T 4a2a_A 290 TAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGC 360 (419)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEe
Confidence 45677778889999998888888876642 123577899999999999999999999999998655
No 72
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=93.75 E-value=0.13 Score=53.58 Aligned_cols=63 Identities=11% Similarity=0.009 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCCcCEEEEecCCcCCHHHHHHHHhhhCCceeecC
Q 007076 482 KQLALLYLATVQGIAYGTRHIVEHCNA-H-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR 544 (619)
Q Consensus 482 ~~l~~~~rAvlEgiaf~~~~~l~~l~~-~-g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~ 544 (619)
.++..+.+..++.++-.+++.++.+.. . ...++.|+++||+++.+.+.+++++.|+.||.+..
T Consensus 274 ~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~ 338 (377)
T 2ych_A 274 GRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVN 338 (377)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecC
Confidence 345555678889998888888886632 2 34789999999999999999999999999998864
No 73
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=93.60 E-value=0.22 Score=51.33 Aligned_cols=83 Identities=13% Similarity=0.101 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhC-CceeecCCC----C-ccchHH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG-CPIILPREN----E-SVLLGA 553 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg-~pV~~~~~~----e-~~alGA 553 (619)
+++|..+ -+.|-.|.++.+.++.+. ..+++|+++|||++|+.+++.++..+. .+|...+.- + --|+.-
T Consensus 257 s~~Dv~A---TLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aF 330 (371)
T 3qbx_A 257 PAADIQA---TLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAF 330 (371)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHH
Confidence 4677653 667777766666555443 246899999999999999999999985 777665431 1 225566
Q ss_pred HHHHHhhc-cccCCHH
Q 007076 554 AILGAVAA-KRYSSLI 568 (619)
Q Consensus 554 AllA~~~~-G~~~~~~ 568 (619)
|+||...+ |.-.++.
T Consensus 331 A~LA~~~l~g~p~~lp 346 (371)
T 3qbx_A 331 AWLAHRFLERLPGNCP 346 (371)
T ss_dssp HHHHHHHHTTCCCSCH
T ss_pred HHHHHHHHcCCCCCCC
Confidence 67766543 4333443
No 74
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=93.54 E-value=0.2 Score=51.23 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhh---CCceeecC----CCCccchH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLLG 552 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---g~pV~~~~----~~e~~alG 552 (619)
.+.+++. ++.+.++-.+.+.++.+.+. ...++|.++||.+.|..+++.+.+.+ |.+|.+++ .+.+.++|
T Consensus 216 ~~~diAa---~fq~~l~~~l~~~~~~~~~~-~~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG 291 (330)
T 2ivn_A 216 RVEDLAY---SFQETAFAALVEVTERAVAH-TEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIA 291 (330)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHH-hCCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHH
Confidence 3567654 77777776666666554331 13568999999999999999999887 67887765 33466888
Q ss_pred HHHHHHhhcccc
Q 007076 553 AAILGAVAAKRY 564 (619)
Q Consensus 553 AAllA~~~~G~~ 564 (619)
+|.......|..
T Consensus 292 ~a~~~~~~~~~~ 303 (330)
T 2ivn_A 292 YTGLRMYKAGIS 303 (330)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHhcCCC
Confidence 887665544543
No 75
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=92.97 E-value=0.32 Score=49.83 Aligned_cols=81 Identities=16% Similarity=0.190 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCcCEEEEecCCcCCHHHHHHHHhhh---CCceeecC----CCCccchH
Q 007076 481 EKQLALLYLATVQGIAYGTRHIVEHC-NAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLLG 552 (619)
Q Consensus 481 ~~~l~~~~rAvlEgiaf~~~~~l~~l-~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---g~pV~~~~----~~e~~alG 552 (619)
+.+++. ++.++++-.+.+.++.. ++.+ +++|.++||.+.|..+++.+.+.+ |.+|.+++ .+.+.++|
T Consensus 222 ~~diAa---sfq~~l~~~l~~~~~~a~~~~g--~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG 296 (334)
T 3eno_A 222 IEDISY---SIQETAFAMLVEVLERALYVSG--KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIA 296 (334)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHHHHHT--CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHH
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHcC--CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHH
Confidence 456654 67777776666665543 3333 579999999999999999999988 77887765 34566788
Q ss_pred HHHHHHhhccccCC
Q 007076 553 AAILGAVAAKRYSS 566 (619)
Q Consensus 553 AAllA~~~~G~~~~ 566 (619)
+|.......|...+
T Consensus 297 ~a~~~~~~~g~~~~ 310 (334)
T 3eno_A 297 QAALLMYKSGVRMS 310 (334)
T ss_dssp HHHHHHHHTTCCCC
T ss_pred HHHHHHHHcCCCCC
Confidence 88776666665544
No 76
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=92.72 E-value=0.18 Score=53.51 Aligned_cols=77 Identities=6% Similarity=0.057 Sum_probs=53.1
Q ss_pred CCeEEEEEcCCcceEEEEEcC--CC-CEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007076 54 RSVFLGVDVGTGSARAGLFDE--SG-KLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~--~g-~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (619)
+++++||||||+++|+++... +| ++++....|..-. ..| .-.|.+..-+++.++++++-+.++....+=..++|+
T Consensus 7 ~~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~gv-~~G-~I~di~~~~~~I~~av~~ae~~~g~~i~~~v~v~i~ 84 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGL-DEG-EIKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFS 84 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCSE-ETT-EESBHHHHHHHHHHHHHHHHHHHTSCCCSEEEEEEC
T ss_pred CCEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCCe-eCC-EEEcHHHHHHHHHHHHHHHHHHcCCCcCceEEEEEc
Confidence 468999999999999999973 23 6777766653211 222 346888888888888888766666544441467777
Q ss_pred Cc
Q 007076 131 AT 132 (619)
Q Consensus 131 ~~ 132 (619)
+.
T Consensus 85 g~ 86 (419)
T 4a2a_A 85 SV 86 (419)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 77
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=92.66 E-value=0.25 Score=51.20 Aligned_cols=70 Identities=13% Similarity=0.068 Sum_probs=43.2
Q ss_pred CeEEEEEcCCcceEEEEEcCCCC--EEEEEEeeccccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007076 55 SVFLGVDVGTGSARAGLFDESGK--LLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~--il~~~~~~~~~~~-~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (619)
+.++|||||||++|++++. +|+ +......++|..- ..| .-.|++.+.+++.+++++ .+....+ ..+++++
T Consensus 13 ~~~vgiDiGt~~i~~~~~~-~~~~~i~~~g~~~~ps~~~~~g-~i~d~~~~~~~ik~~~~~----~~~~~~~-v~~~i~~ 85 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVS-GNPPALKALASRPTPPGLLMEG-MVAEPAALAQEIKELLLE----ARTRKRY-VVTALSN 85 (377)
T ss_dssp CCCEEEEECSSEEEEEEEE-TTTTEEEEEEEEECCTTSEETT-EESCHHHHHHHHHHHHHH----HTCCCCE-EEEEECG
T ss_pred CceEEEEeCCCeEEEEEEe-CCceEEEEEEeEECCCCcccCC-CcCCHHHHHHHHHHHHHH----cCCCcce-EEEEecC
Confidence 4589999999999999996 554 4444455555322 222 346787777666665554 3433332 3566655
No 78
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=92.34 E-value=0.36 Score=49.29 Aligned_cols=74 Identities=16% Similarity=0.244 Sum_probs=50.8
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccc-cCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIE-QSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e-~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (619)
++||||.++..++++|++. |+++......+. .+..|+.. .....-.+.+..+++++++++++...+|.+|+++.
T Consensus 2 ~iLgIdts~~~~~val~~~-g~i~~~~~~~~~-~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~ 76 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE-DKVLANVFDTLT-TEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQ 76 (330)
T ss_dssp CEEEEECSSSEEEEEEECS-SCEEEEEEEECC-CTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEE
T ss_pred EEEEEEccCCCeEEEEEEC-CEEEEEEEEEee-cccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 3899999999999999974 578866544432 11223321 11223345566778888888888889999998864
No 79
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=92.19 E-value=0.45 Score=52.91 Aligned_cols=77 Identities=22% Similarity=0.358 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhh-CCceeecC----CCCccchHH
Q 007076 479 SSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILPR----ENESVLLGA 553 (619)
Q Consensus 479 ~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl-g~pV~~~~----~~e~~alGA 553 (619)
..+.+++. ++.++++-.+.+.++...+. ..+++|.++||.+.|..+++.+...+ |.+|..+. .+.+.++|-
T Consensus 570 ~~~~dIAa---sFh~ala~~L~~~~~ra~~~-~g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQ 645 (657)
T 3ttc_A 570 APVNQRAW---AFHDALAQGFAALMREQATM-RGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQ 645 (657)
T ss_dssp CCHHHHHH---HHHHHHHHHHHHHHHHHHHT-TTCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHH
T ss_pred CCHHHHHH---HHHHHHHHHHHHHHHHHHHH-cCCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHH
Confidence 35667654 78888887777776655432 24579999999999999999999998 78886543 445668999
Q ss_pred HHHHHh
Q 007076 554 AILGAV 559 (619)
Q Consensus 554 AllA~~ 559 (619)
|++|+.
T Consensus 646 A~~a~~ 651 (657)
T 3ttc_A 646 GVIAAA 651 (657)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998863
No 80
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=91.94 E-value=0.33 Score=49.68 Aligned_cols=81 Identities=17% Similarity=0.243 Sum_probs=54.0
Q ss_pred CCCCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCcccc-CHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007076 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQ-SSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (619)
Q Consensus 52 m~~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~-dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (619)
|++.++||||-.+..+-++|++ +++++......+.. +.+|.... ....-.+.+...++++++++++...+|.+|+++
T Consensus 3 ~~~M~iLgIdts~~~~svAl~~-~~~i~~~~~~~~~~-~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~ 80 (334)
T 3eno_A 3 MDPMIVLGLEGTAHTISCGIID-ESRILAMESSMYRP-KTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFS 80 (334)
T ss_dssp CCCCEEEEEECSSSEEEEEEEE-SSCCCEEEEEECCC-SSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred ccCceEEEEECCCcCeEEEEEE-CCEEEEEEEEeecc-ccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 3334699999999999999998 45777764443321 22233321 122334566778888888888888999999997
Q ss_pred Cccc
Q 007076 131 ATCS 134 (619)
Q Consensus 131 ~~~~ 134 (619)
.-+|
T Consensus 81 ~gPG 84 (334)
T 3eno_A 81 MGPG 84 (334)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 6443
No 81
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=91.84 E-value=0.38 Score=49.56 Aligned_cols=81 Identities=19% Similarity=0.291 Sum_probs=54.1
Q ss_pred CCCCeEEEEEcCCc--ceEEEEEcCCCC---EEEEEEeecccc------c--CCCcccc-CH----HHHHHHHHHHHHHH
Q 007076 52 RSRSVFLGVDVGTG--SARAGLFDESGK---LLGSASSPIQIW------K--EGDCIEQ-SS----TDIWHAICAAVDSA 113 (619)
Q Consensus 52 m~~~~~lgIDiGTT--siKa~l~d~~g~---il~~~~~~~~~~------~--~~g~~e~-dp----~~~~~~~~~~l~~~ 113 (619)
|+..++||+=.||| +|-+++++-+|+ ++.....||+.. . .++..+. .. .++=+...++++++
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~~~~~~~~~~~~~~pyp~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av~~~ 81 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLGRLDRSVGKLFALAVNNL 81 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCHHHHHHHHGGGCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecccchhhHeEEEEEEeCCeEEEEeeeeecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 66668999999998 699999996654 677778888631 1 1111110 01 12334455777788
Q ss_pred HHHcCCCCCCEEEEEEcCc
Q 007076 114 CSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 114 ~~~~~~~~~~I~aIgis~~ 132 (619)
+++.++++.+|.+||.-+|
T Consensus 82 l~~~~~~~~~i~~IGsHGQ 100 (370)
T 3cqy_A 82 LAKTKIAKDEIIAIGSHGQ 100 (370)
T ss_dssp HHHHCCCGGGEEEEEEEEE
T ss_pred HHHcCCCcccccEEEeCCc
Confidence 8888888889999998553
No 82
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=91.77 E-value=0.38 Score=54.60 Aligned_cols=76 Identities=14% Similarity=0.262 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCcCEEEEecCCcCCHHHHHHHHhhh---CCceeecC----CCCccch
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHC-NAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLL 551 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l-~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---g~pV~~~~----~~e~~al 551 (619)
.+.+++. ++.++++-.+.+....+ ++.| +++|.++||.+.|..+++.+.+.+ |.+|..+. ...+.|+
T Consensus 665 ~~~dIAa---sFq~ala~~L~~~~~~a~~~~g--~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGial 739 (761)
T 3vth_A 665 EKSYISA---KFHNTVVNFTYDLANLIRKETG--INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISL 739 (761)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHHHHC--CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHHhC--CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHH
Confidence 3455544 66677776666655544 3334 578999999999999999999886 78887654 3456689
Q ss_pred HHHHHHHhh
Q 007076 552 GAAILGAVA 560 (619)
Q Consensus 552 GAAllA~~~ 560 (619)
|.|++|+..
T Consensus 740 GQA~~a~~~ 748 (761)
T 3vth_A 740 GQAVIANKI 748 (761)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988643
No 83
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=91.32 E-value=0.34 Score=55.19 Aligned_cols=81 Identities=21% Similarity=0.328 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhh---CCceeec----CCCCccchH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILP----RENESVLLG 552 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---g~pV~~~----~~~e~~alG 552 (619)
.+.+++. ++.+.++-.+.+.+..+.+. ..+++|.++||.+.|.++++.+.+.+ |..|.++ ..+.+.|+|
T Consensus 677 ~~~dIAa---sfQ~al~~~L~~~~~~a~~~-tg~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALG 752 (772)
T 4g9i_A 677 SPADIAY---SAHLALARAFAHTAVERARE-FGVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVG 752 (772)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHHT-TTCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHH-hCcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHH
Confidence 3556554 66666665555555544331 24678999999999999999998875 5667654 345567999
Q ss_pred HHHHHHhhcccc
Q 007076 553 AAILGAVAAKRY 564 (619)
Q Consensus 553 AAllA~~~~G~~ 564 (619)
.|++|+..+.-|
T Consensus 753 QA~iA~~~L~~~ 764 (772)
T 4g9i_A 753 QAFLGGLYLEGY 764 (772)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHhcc
Confidence 999998766444
No 84
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=91.24 E-value=0.36 Score=48.96 Aligned_cols=69 Identities=10% Similarity=0.114 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCC---ceeecCC-CCccchHHHHHH
Q 007076 483 QLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGC---PIILPRE-NESVLLGAAILG 557 (619)
Q Consensus 483 ~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~---pV~~~~~-~e~~alGAAllA 557 (619)
.+...++..++.++-.+. +.+++. ..++.|+++||+|+ ++.+.+.+.++. ++.++.. .++.|+|+++++
T Consensus 247 ~~~~~i~~~~~~~~~~i~---~~i~~~-~~~~~vvl~GGga~--ll~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 247 IVTEAMNEALRKLEQRVL---NTLNEF-SGYTHVMVIGGGAE--LICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHTTC-CCCCEEEEESTTHH--HHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHhh-cCCCeEEEECChHH--HHHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 333334455555554333 334332 35689999999986 488999999998 5766554 558899999865
No 85
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=90.36 E-value=0.36 Score=51.50 Aligned_cols=72 Identities=14% Similarity=0.212 Sum_probs=46.0
Q ss_pred eEEEEEcCCcceEEEEEcCCCC-----EEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007076 56 VFLGVDVGTGSARAGLFDESGK-----LLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~-----il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (619)
.+|+||+|+|+.|+++++..|. .+...+..+++-.+ ...-..+++|+.+.++|.+.+++.+.. .+..-+|++
T Consensus 78 ~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~--l~~gt~~eLFd~IA~~i~~fl~~~~~~-~~~lpLGfT 154 (470)
T 3f9m_A 78 DFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPED--AMTGTAEMLFDYISECISDFLDKHQMK-HKKLPLGFT 154 (470)
T ss_dssp EEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHH--HHSSBHHHHHHHHHHHHHHHHHHTTCS-SSCCEEEEE
T ss_pred EEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChH--hccCCHHHHHHHHHHHHHHHHhhcccc-ccccceEEE
Confidence 5899999999999999995443 23333333331100 012246899999999999999875432 233345554
No 86
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=89.53 E-value=0.9 Score=48.08 Aligned_cols=60 Identities=17% Similarity=0.173 Sum_probs=41.8
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEe--ecccccCCCccccCHHHHHHHHHHHHHHHHHHcCC
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASS--PIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANV 119 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~--~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~ 119 (619)
..+|+||+|+|++|+++++..|.+ ...+. ++|.... .-..+++|+.+.++|.+.+++.+.
T Consensus 59 G~~LAlDlGGTn~RV~~V~l~g~~-~~~~~~~~ip~~~~----~g~~~~LFd~Ia~~i~~fl~~~~~ 120 (445)
T 3hm8_A 59 GDFLALDLGGTNFRVLLVRVTTGV-QITSEIYSIPETVA----QGSGQQLFDHIVDCIVDFQQKQGL 120 (445)
T ss_dssp EEEEEEEESSSSEEEEEEEESSSE-EEEEEEECCCHHHH----TSBHHHHHHHHHHHHHHHHHHHTC
T ss_pred eEEEEEEecCCeEEEEEEEECCce-EEEEEEeccCcccc----CCCHHHHHHHHHHHHHHHHHHhCc
Confidence 358999999999999999977663 22222 2331111 114678999999999999886543
No 87
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=88.77 E-value=0.8 Score=50.10 Aligned_cols=78 Identities=19% Similarity=0.195 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCcCEEEEecCCcCCHHHHHHHHhhhCC-ceeecC--CCCccchHHHHH
Q 007076 481 EKQLALLYLATVQGIAYGTRHIVEHC-NAHGHKIDTLLACGGLAKNPLFLQQHADIIGC-PIILPR--ENESVLLGAAIL 556 (619)
Q Consensus 481 ~~~l~~~~rAvlEgiaf~~~~~l~~l-~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~-pV~~~~--~~e~~alGAAll 556 (619)
..+++. ++.+.++-.+.+.+..+ ++. .+++|.++||.+.|..+++.+....+. .|.++. .+.+.++|+|+.
T Consensus 280 ~~dIAa---sfQ~~l~~~L~~~~~~a~~~t--g~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAA---TAQAALERAVFGLADSVLART--GERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHH---HHHHHHHHHHHHHHHHHHHHH--TCSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHc--CCCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 467665 55555555555554443 333 367999999999999999998887665 665543 455778999999
Q ss_pred HHhhccc
Q 007076 557 GAVAAKR 563 (619)
Q Consensus 557 A~~~~G~ 563 (619)
+....|.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 8766554
No 88
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=87.87 E-value=1.4 Score=48.14 Aligned_cols=80 Identities=13% Similarity=0.167 Sum_probs=53.7
Q ss_pred CCCCeEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccC-HHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007076 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQS-STDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (619)
Q Consensus 52 m~~~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~d-p~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (619)
|++.++||||-.+..+.++|++.+++++......... +.+|.+... ...-.+.+...+++++++ +...+|.+|+++
T Consensus 3 m~~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~~~~-~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id~ia~~ 79 (540)
T 3en9_A 3 MDPMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYKP-PKQGINPREAADHHAETFPKLIKEAFEV--VDKNEIDLIAFS 79 (540)
T ss_dssp CCSCEEEEEECSSSEEEEEEEETTSCEEEEEEEECCC-CCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCCEEEEE
T ss_pred cccceEEEEEcCccceEEEEEECCCeEEEEEEEeecC-CCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCcEEEEe
Confidence 3334699999999999999999887888876554321 123433222 234455666777777776 566789999987
Q ss_pred Cccc
Q 007076 131 ATCS 134 (619)
Q Consensus 131 ~~~~ 134 (619)
..+|
T Consensus 80 ~gPG 83 (540)
T 3en9_A 80 QGPG 83 (540)
T ss_dssp EESS
T ss_pred cCCC
Confidence 6444
No 89
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=86.29 E-value=1.5 Score=39.21 Aligned_cols=24 Identities=38% Similarity=0.494 Sum_probs=21.6
Q ss_pred EEEEEcCCcceEEEEEcCCCCEEE
Q 007076 57 FLGVDVGTGSARAGLFDESGKLLG 80 (619)
Q Consensus 57 ~lgIDiGTTsiKa~l~d~~g~il~ 80 (619)
+||||.|+..++.++.|..|.+..
T Consensus 5 iLGiDpG~~riGvAv~d~~g~~a~ 28 (150)
T 1vhx_A 5 ILGLDLGTKTLGVALSDEMGWTAQ 28 (150)
T ss_dssp EEEEEECSSEEEEEEECTTSSSEE
T ss_pred EEEEEccCCEEEEEEEECCCCEEe
Confidence 899999999999999999887643
No 90
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=85.36 E-value=1.7 Score=42.82 Aligned_cols=30 Identities=13% Similarity=0.294 Sum_probs=23.8
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEe
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASS 84 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~ 84 (619)
.+.|.||+|-|++|.++||.+++++...+.
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~~~~~~r~ 52 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAARSVAGGLA 52 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEEEEEE
T ss_pred CcEEEEEeCCCeeEEEEEeCCCEEEEEEEe
Confidence 358999999999999999855666665443
No 91
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=85.33 E-value=0.78 Score=46.48 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=33.5
Q ss_pred cCEEEEecCCcCCHHHHHHHHhhhCCceeecCCCCccchHHHHHHH
Q 007076 513 IDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGA 558 (619)
Q Consensus 513 ~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~ 558 (619)
...|.++|...-..++.+.++ .+|.++...+.++++..|-..++.
T Consensus 259 ~~~V~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~GL~~~a~ 303 (330)
T 3t69_A 259 VDGVCLVGSGGLGTLYRTALE-SQGLNVRAVDADEAVRAGLSAAAR 303 (330)
T ss_dssp CCEEEEEECHHHHHHHHHHHH-HTTCEEEEEEHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHHHH-HcCCCceeeCHHHHHHHHHHHHHH
Confidence 367999999888888888886 489998877655565566554443
No 92
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=84.72 E-value=0.86 Score=45.46 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=27.7
Q ss_pred CeEEEEEcCCcceEEEEEcCCCCEEEEEEeecc
Q 007076 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQ 87 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~ 87 (619)
+++|+||-||||+|+-++| +|+++.+.+.+.-
T Consensus 6 ~~~IavDWGTs~lRa~l~~-~g~vl~~~~~~~G 37 (295)
T 3nuw_A 6 ARYIAIDWGSTNLRAWLYQ-GEECLESRQSEAG 37 (295)
T ss_dssp CEEEEEEECSSCEEEEEEE-TTEEEEEEEESCC
T ss_pred ccEEEEEecchheeeeeec-CCceehhhcCCCc
Confidence 5799999999999999999 8899988766543
No 93
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=83.23 E-value=1.9 Score=40.88 Aligned_cols=64 Identities=13% Similarity=0.249 Sum_probs=45.4
Q ss_pred EEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCccc
Q 007076 57 FLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (619)
Q Consensus 57 ~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (619)
+|+||-.|..+-++|++. |+++..... .. .+..+ .+...+++++++.++...+|.+|+++.-+|
T Consensus 4 iLaIdTS~~~~svAl~~~-~~~~~~~~~-~~--------~~Hs~----~L~p~i~~~L~~a~~~~~dld~Iav~~GPG 67 (213)
T 3r6m_A 4 ILAIDTATENCSVALLVN-DQVISRSEV-AP--------RDHTK----KVLPMVDEVLKEAGLTLQDLDALAFGRGPG 67 (213)
T ss_dssp EEEEECSSSEEEEEEESS-SCEEEEEEE-CC--------SCCHH----HHHHHHHHHHHTTTCCTTTCSEEEEEEESS
T ss_pred EEEEEccCcceEEEEEEC-CEEEEEEEe-ch--------HHHHH----HHHHHHHHHHHHcCCCHHHccEEEEecCCC
Confidence 899999999999999974 777765321 11 12223 344567777888888889999999975343
No 94
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=83.04 E-value=1.3 Score=44.74 Aligned_cols=20 Identities=20% Similarity=0.265 Sum_probs=17.6
Q ss_pred eEEEEEcCCcceEEEEEcCC
Q 007076 56 VFLGVDVGTGSARAGLFDES 75 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~ 75 (619)
.+.+||+||.++|..+++.+
T Consensus 13 ~~a~IDiGSns~rl~I~~~~ 32 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIK 32 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEE
T ss_pred EEEEEEECcCcEEEEEEEEc
Confidence 37899999999999999943
No 95
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=82.73 E-value=0.85 Score=46.17 Aligned_cols=31 Identities=19% Similarity=0.428 Sum_probs=22.1
Q ss_pred EEEEEcCCcceEEEEEcCCCCEEEEEEeeccc
Q 007076 57 FLGVDVGTGSARAGLFDESGKLLGSASSPIQI 88 (619)
Q Consensus 57 ~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~ 88 (619)
+||+|||+-++|+++++.+|++ ...+.+.|.
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~-~~~~~~~Pl 32 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEF-KVHHLYFPM 32 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCC-EEEEC----
T ss_pred eeEEEecccceeeeeecCCCce-EEEEEecCC
Confidence 7999999999999999989988 666666664
No 96
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=82.59 E-value=3.6 Score=42.56 Aligned_cols=46 Identities=13% Similarity=0.073 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCc-CCHHHHHHHHhh
Q 007076 489 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADI 535 (619)
Q Consensus 489 rAvlEgiaf~~~~~l~~l~~-~g~~~~~I~~~GG~a-~s~~~~Qi~Adv 535 (619)
+-++|..+|+++..+-.+.- .| .++.|+++||.+ +++.+++.+.+-
T Consensus 300 ~la~d~f~yriak~Iga~aa~LG-~vDaIVfTGGIgEns~~vr~~I~~~ 347 (398)
T 4ijn_A 300 KLAYDVYIHRLRKYIGAYMAVLG-RTDVISFTAGVGENVPPVRRDALAG 347 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-SCCEEEEEHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcEEEECCccccccHHHHHHHHHH
Confidence 46788889988877655433 33 688999999988 556677655543
No 97
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=81.95 E-value=2.3 Score=45.97 Aligned_cols=74 Identities=11% Similarity=0.111 Sum_probs=47.1
Q ss_pred EeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---C--CCcCEEEEecCCcCCHHHHHHHHhhhCC-ceeec
Q 007076 470 GIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH---G--HKIDTLLACGGLAKNPLFLQQHADIIGC-PIILP 543 (619)
Q Consensus 470 g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~---g--~~~~~I~~~GG~a~s~~~~Qi~Advlg~-pV~~~ 543 (619)
..+..+...++-++ .++.|--..-..|- +..++.+... + ..+..|+++||+|.-+-+.|+..++|+. +|++-
T Consensus 505 ~~L~~I~~R~~vEE-lelVR~~ak~~vfv-~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiG 582 (607)
T 1nbw_A 505 GELVPIDNASPLEK-IRLVRRQAKEKVFV-TNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAG 582 (607)
T ss_dssp TEEEEECCSSCHHH-HHHHHHHHHHHHHH-HHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEE
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhh-HHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEe
Confidence 55666744433455 44444433333332 2234554332 2 1358999999999999999999999999 88764
Q ss_pred CC
Q 007076 544 RE 545 (619)
Q Consensus 544 ~~ 545 (619)
..
T Consensus 583 rP 584 (607)
T 1nbw_A 583 QG 584 (607)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 98
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=80.90 E-value=2.6 Score=47.84 Aligned_cols=63 Identities=22% Similarity=0.419 Sum_probs=41.2
Q ss_pred CCeEEEEEcC-CcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007076 54 RSVFLGVDVG-TGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (619)
Q Consensus 54 ~~~~lgIDiG-TTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (619)
.+.+||||-| .|++|++++|++|+++..... |+..+ ..+ |+...+.+.+++.+. ++..|+|++
T Consensus 328 ~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~i-y~~~~-----~~~----~~~~~~~l~~li~~~-----~~~~IaIGn 391 (785)
T 3bzc_A 328 PRATLGLDPGLRTGVKVAVVDATGKLLDTATV-YPHAP-----KNQ----WDQTLAVLAALCAKH-----QVELIAIGN 391 (785)
T ss_dssp SCCEEEEECCSSSCEEEEEECTTSCEEEEEEE-CCSGG-----GCC----HHHHHHHHHHHHHHH-----TCCEEEEES
T ss_pred CCeEEEECCCCcCceEEEEECCCCCEEEEEEE-ecCCc-----hhH----HHHHHHHHHHHHHHc-----CCCEEEECC
Confidence 4569999999 699999999999999987654 33111 111 333345566666653 344555544
No 99
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=80.67 E-value=1.2 Score=44.46 Aligned_cols=25 Identities=12% Similarity=0.065 Sum_probs=21.2
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEE
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGS 81 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~ 81 (619)
+.+|||+|+|.+|++++ ++++++..
T Consensus 21 ~~iGIDiGsTt~K~V~~-~~~~i~~~ 45 (287)
T 2ews_A 21 MKVGIDAGGTLIKIVQE-QDNQRTFK 45 (287)
T ss_dssp CEEEEEECSSEEEEEEE-CSSCEEEE
T ss_pred eEEEEEEChhhEEEEEE-cCCEEEEE
Confidence 58999999999999999 46777754
No 100
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=78.84 E-value=4.7 Score=40.60 Aligned_cols=71 Identities=14% Similarity=0.045 Sum_probs=38.9
Q ss_pred eEEEEEcCCcceEEEEEcC-CCC--EEEEEEeeccccc---CCCccccCHHHHHHHHHHHHHHH---HHHcCCCCCCEEE
Q 007076 56 VFLGVDVGTGSARAGLFDE-SGK--LLGSASSPIQIWK---EGDCIEQSSTDIWHAICAAVDSA---CSLANVDGEEVKG 126 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~-~g~--il~~~~~~~~~~~---~~g~~e~dp~~~~~~~~~~l~~~---~~~~~~~~~~I~a 126 (619)
.+.+|||||.++|..+++. ++. ++...+.++.+-. ..| ..+++. .+..++++++. ++..+ ..+|.+
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g--~ls~ea-i~r~~~~L~~f~~~~~~~~--v~~v~~ 79 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKG--FITEEA-MDRALDTLKKFRVILDEHA--VVHVIA 79 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGT--CCCHHH-HHHHHHHHHHHHHHHHHTT--CCEEEE
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccC--CcCHHH-HHHHHHHHHHHHHHHHHcC--CCEEEE
Confidence 4789999999999999984 343 3444444443221 112 223333 34444555444 34433 356777
Q ss_pred EEEcC
Q 007076 127 VGFAA 131 (619)
Q Consensus 127 Igis~ 131 (619)
++-++
T Consensus 80 vATsA 84 (315)
T 3mdq_A 80 TGTSA 84 (315)
T ss_dssp EECHH
T ss_pred EeeHH
Confidence 76544
No 101
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=78.34 E-value=2.4 Score=44.29 Aligned_cols=47 Identities=9% Similarity=0.143 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCc-CCHHHHHHHHhh
Q 007076 489 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADI 535 (619)
Q Consensus 489 rAvlEgiaf~~~~~l~~l~~-~g~~~~~I~~~GG~a-~s~~~~Qi~Adv 535 (619)
+-++|..+|+++..+-.+-. .+.+++.|+++||.. +++.+++.+.+-
T Consensus 315 ~lA~d~f~yri~k~IGa~aa~L~G~vDaIVFTgGIGEns~~vR~~v~~~ 363 (415)
T 3sk3_A 315 KRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSLGK 363 (415)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGSTTCCCEEEEEHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCEEEECCccccCCHHHHHHHHhh
Confidence 36789999999988876643 555789999999987 567776666554
No 102
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=77.44 E-value=7.7 Score=35.13 Aligned_cols=61 Identities=18% Similarity=0.152 Sum_probs=38.8
Q ss_pred EEEEEcCCcceEEEEEcCCCC---E---EEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 007076 57 FLGVDVGTGSARAGLFDESGK---L---LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (619)
Q Consensus 57 ~lgIDiGTTsiKa~l~d~~g~---i---l~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgi 129 (619)
+||||-|++.+-.+++|.+|+ . +......++ ...+..+=+..+.+.+.+++++. ++..++|
T Consensus 3 ILGIDPGl~~tG~gvi~~~g~~~~~~~~v~~G~I~t~-------~~~~~~~RL~~I~~~l~~~i~~~-----~Pd~vai 69 (166)
T 4ep4_A 3 VAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTS-------PQEPAKERVGRIHARVLEVLHRF-----RPEAVAV 69 (166)
T ss_dssp EEEEECCSSEEEEEEEEECSSSSSCEEEEEEEEEECC-------TTSCHHHHHHHHHHHHHHHHHHH-----CCSEEEE
T ss_pred EEEEccccCceEEEEEEecCCccceEEEEEeCeEECC-------CCCCHHHHHHHHHHHHHHHHHHh-----CCCEEEE
Confidence 899999999999999997765 2 333333332 12344455556666677777653 3444555
No 103
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=76.63 E-value=4.6 Score=43.74 Aligned_cols=74 Identities=15% Similarity=0.148 Sum_probs=43.5
Q ss_pred CeEEEEEcCCcceEEEEEcC-CCC--EEEEEEeeccccc---CCCccccCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEE
Q 007076 55 SVFLGVDVGTGSARAGLFDE-SGK--LLGSASSPIQIWK---EGDCIEQSSTDIWHAICAAVDSACSLAN-VDGEEVKGV 127 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~-~g~--il~~~~~~~~~~~---~~g~~e~dp~~~~~~~~~~l~~~~~~~~-~~~~~I~aI 127 (619)
+.+.+|||||.++|..|++. ++. ++...+.++..-. ..| ..++ +-.+..++++++..+... ....+|.++
T Consensus 11 ~~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g--~Ls~-eai~r~~~~L~~f~~~~~~~~v~~v~~v 87 (513)
T 1u6z_A 11 QEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDN--MLSE-EAMTRGLNCLSLFAERLQGFSPASVCIV 87 (513)
T ss_dssp -CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTC--CBCH-HHHHHHHHHHHHHHHHTTTCCGGGEEEE
T ss_pred CeEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccC--CcCH-HHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 35899999999999999994 443 3444444443321 112 2333 344555666766655432 234578888
Q ss_pred EEcC
Q 007076 128 GFAA 131 (619)
Q Consensus 128 gis~ 131 (619)
+-++
T Consensus 88 ATsA 91 (513)
T 1u6z_A 88 GTHT 91 (513)
T ss_dssp ECHH
T ss_pred ecHH
Confidence 7765
No 104
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=76.14 E-value=5.8 Score=39.28 Aligned_cols=70 Identities=14% Similarity=0.053 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhC-CceeecCCCCccchHHHHHHHhh
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG-CPIILPRENESVLLGAAILGAVA 560 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg-~pV~~~~~~e~~alGAAllA~~~ 560 (619)
.+++-.+..+...+..+... ..++.|++.||.++++.+.+.+...+. .+|..+...+++++|||.++...
T Consensus 218 ~il~~~~~~La~~i~~l~~~-l~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 218 DILKQGAELLASQAVYLARK-IGTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDLGKRSPEIGAVILAYKE 288 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HTCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEECCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEECCccCcHHHHHHHHHHCCCCeEeccCCCCChHHHHHHHHHHh
Confidence 44444444444433333221 246789999998876766665555443 47877664457789999998654
No 105
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=75.90 E-value=8.7 Score=39.63 Aligned_cols=46 Identities=11% Similarity=0.086 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCcC-CHHHHHHHHhh
Q 007076 489 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLAK-NPLFLQQHADI 535 (619)
Q Consensus 489 rAvlEgiaf~~~~~l~~l~~-~g~~~~~I~~~GG~a~-s~~~~Qi~Adv 535 (619)
+-++|..+|+++..+-.+.. .| .++.|+++||... ++.+++.+.+-
T Consensus 291 ~lA~d~f~yri~k~Iga~aa~Lg-~vDaIVfTGGIgens~~vR~~i~~~ 338 (391)
T 3r9p_A 291 QLAYSVFTHRLRKYIGAYLAVLG-HTDVISFTAGIGENDAAVRRDAVSG 338 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-SCCEEEEEHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECcccccCCHHHHHHHHHH
Confidence 36789999998887655533 45 6899999999886 57677665543
No 106
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=74.24 E-value=6.2 Score=39.91 Aligned_cols=66 Identities=12% Similarity=0.168 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCC-cCEEEEecCCcCCHHHHHHHHhhhCCceeecCCCC-ccchHHHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHK-IDTLLACGGLAKNPLFLQQHADIIGCPIILPRENE-SVLLGAAILGA 558 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~-~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~~~~~e-~~alGAAllA~ 558 (619)
..++-++-.+.+-+... +.... ++.|+++||+|. ++.+.+.+.++.++.+++.+. +.|+|+..++.
T Consensus 256 ~~~~e~~~~I~~~i~~~-~~~~~~~~~IvltGGGA~--l~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 256 KVKEKFLKDAIKLIEKR-GFKLDQLDSLIFIGGTTQ--KLKEQISKTYPNNSIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp HHHHHHHHHHHHHHHHH-TCCTTSCSEEEEESTTHH--HHHHHHHHHSTTCEECCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc-CCCHHHccEEEEECChHH--HHHHHHHHHcCCCCEecCCChhhHHHHHHHHHh
Confidence 55555544433333332 22222 579999999986 467999999998898877555 77888877653
No 107
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=73.97 E-value=7.2 Score=42.42 Aligned_cols=60 Identities=12% Similarity=0.132 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCcCEEEEecCCcCCHHHHHHHHhhh---CCceeecC
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHC-NAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR 544 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l-~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl---g~pV~~~~ 544 (619)
.+.+++. ++.+.++-.+.+..+.. ++.+ .++|.++||.+.|..+++.+...+ |.+|..++
T Consensus 220 ~~~~ia~---~fq~~~~~~l~~~~~~a~~~~~--~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~ 283 (540)
T 3en9_A 220 RLEDICY---SLQEYAFSMLTEITERALAHTN--KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPP 283 (540)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHHHHT--CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCC
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHHhC--CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCC
Confidence 3556554 66666665555554433 3333 579999999999999999999876 67887765
No 108
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=72.87 E-value=1.6 Score=45.55 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=18.6
Q ss_pred CeEEEEEcCCcceEEEEEcCCCC
Q 007076 55 SVFLGVDVGTGSARAGLFDESGK 77 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~ 77 (619)
++++|||+|||+++++++ .+|+
T Consensus 13 ~~vvGIDlGTt~s~va~~-~~g~ 34 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHT-VDDK 34 (409)
T ss_dssp CCEEEEEECSSEEEEEEE-ETTE
T ss_pred CcEEEEEcCCCeEEEEEE-eCCc
Confidence 469999999999999998 4554
No 109
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=72.74 E-value=5.5 Score=37.87 Aligned_cols=64 Identities=13% Similarity=0.067 Sum_probs=44.2
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCcc
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~ 133 (619)
++|+||-.|..+-++|++ +++++ +...... .+-.+ .+...++++++++++...+|.+|+++.-+
T Consensus 13 ~iLaidTS~~~~sval~~-~~~~l-~~~~~~~--------r~Hse----~L~p~i~~~L~~a~~~~~dld~Iav~~GP 76 (218)
T 2a6a_A 13 MNVLALDTSQRIRIGLRK-GEDLF-EISYTGE--------KKHAE----ILPVVVKKLLDELDLKVKDLDVVGVGIGP 76 (218)
T ss_dssp CEEEEEECSSSEEEEEEE-TTEEE-EEEEESC--------GGGGG----HHHHHHHHHHHHHTCCGGGCSEEEEECCS
T ss_pred eEEEEEcCCcCeEEEEEE-CCEEE-EEEecch--------HHHHH----HHHHHHHHHHHHcCCCHHHCCEEEEEcCC
Confidence 499999999999999998 56676 3322211 11122 34455667777777788899999997644
No 110
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=72.45 E-value=4.4 Score=41.36 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=39.1
Q ss_pred eEEEEEcCCcceEEEEEcC--CCCE--EEEEEeecccccCCCc---cccCHHHHHHHHHHHHHHHHHHcC-CCCCCEEEE
Q 007076 56 VFLGVDVGTGSARAGLFDE--SGKL--LGSASSPIQIWKEGDC---IEQSSTDIWHAICAAVDSACSLAN-VDGEEVKGV 127 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~--~g~i--l~~~~~~~~~~~~~g~---~e~dp~~~~~~~~~~l~~~~~~~~-~~~~~I~aI 127 (619)
.+.+|||||.++|..|++. +|.+ +...+.++.+ ..|. ...++ +-.+..++++++..+... ....+|.++
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrL--g~g~~~~g~ls~-eai~r~~~aL~~f~~~~~~~~v~~v~~v 93 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRL--GQDVDKTHRFAD-EALERAYVAAREFAGVIAEHPIDGLRFV 93 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCT--TTTHHHHSSCCH-HHHHHHHHHHHHHHHHHTTSCCSEEEEE
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeC--CCCccccCCcCH-HHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 5889999999999999994 3432 3333333322 2221 12233 334455566665544332 123456666
Q ss_pred EEcC
Q 007076 128 GFAA 131 (619)
Q Consensus 128 gis~ 131 (619)
+-++
T Consensus 94 ATsA 97 (343)
T 3cer_A 94 ATSA 97 (343)
T ss_dssp ECHH
T ss_pred ecHH
Confidence 5543
No 111
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=72.42 E-value=10 Score=38.97 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhh-CCceeecCCC-----CccchHH
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILPREN-----ESVLLGA 553 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advl-g~pV~~~~~~-----e~~alGA 553 (619)
+++|..+ -+.|-.|.++.+.++.+ . ..++|+++|||++|+.+++.++..+ +.+|...+.- .--|+.-
T Consensus 264 ~~~Dv~A---TLt~~TA~sIa~~~~~~---~-~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF 336 (370)
T 3cqy_A 264 NEEDIQS---TLLDLTCHSIAQDILKL---A-QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF 336 (370)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHH---C-SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHhc---C-CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH
Confidence 4667653 67777777666666544 2 4568999999999999999999999 4566543311 1124555
Q ss_pred HHHHHhhc
Q 007076 554 AILGAVAA 561 (619)
Q Consensus 554 AllA~~~~ 561 (619)
|+||...+
T Consensus 337 A~LA~~~l 344 (370)
T 3cqy_A 337 AWLAMRYQ 344 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 112
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=71.57 E-value=8.5 Score=36.84 Aligned_cols=64 Identities=14% Similarity=0.241 Sum_probs=43.7
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCcc
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~ 133 (619)
++|+||-.+..+-++|++ +|+++... .... ....+. +...|+++++++++...+|.+|+++.-+
T Consensus 2 ~iL~idTs~~~~sval~~-~~~~~~~~-~~~~--------~~h~~~----l~~~i~~~L~~a~~~~~did~Iav~~GP 65 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-NGTINAHF-ELCP--------REHTQR----ILPMVQEILAASGASLNEIDALAFGRGP 65 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-TTEEEEEE-EECC--------SCCHHH----HHHHHHHHHHHTTCCGGGCSEEEEECCS
T ss_pred eEEEEECCCcCeEEEEEE-CCEEEEEE-hhhh--------HHHHHH----HHHHHHHHHHHcCCCHHHCCEEEEEcCC
Confidence 489999999999999997 56666421 1111 122222 4556777778788888999999997644
No 113
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=70.62 E-value=3 Score=42.62 Aligned_cols=65 Identities=12% Similarity=0.166 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHH-HHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCceee---cCCC-CccchHHHHHH
Q 007076 490 ATVQGIAYGTRHIVEH-CNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIIL---PREN-ESVLLGAAILG 557 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~-l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~~---~~~~-e~~alGAAllA 557 (619)
.+++-++-.+.+.++. +++..-.++.|+++||+|+- +.+.+.+.|+... + ...+ ++.|+|+..++
T Consensus 273 ~~i~~~~~~i~~~i~~~l~~~~~~i~~IvL~GGga~l--l~~~l~~~~~~~~-i~~~~~~P~~ava~G~~~~~ 342 (346)
T 2fsj_A 273 PILEDLANRIIENIRLNLRGEVDRVTSLIPVGGGSNL--IGDRFEEIAPGTL-VKIKPEDLQFANALGYRDAA 342 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGGGEEEEEEESTTHHH--HGGGGGGGSTTCB-CCCCTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccEEEEECCcHHH--HHHHHHHHCcCcE-EeccCCCcHHHHHHHHHHHH
Confidence 4444444444444333 34332245899999999875 7888899998443 3 4444 78899998765
No 114
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=69.66 E-value=2.2 Score=46.79 Aligned_cols=25 Identities=36% Similarity=0.647 Sum_probs=20.3
Q ss_pred CCCCeEEEEEcCCcceEEEEEcCCCC
Q 007076 52 RSRSVFLGVDVGTGSARAGLFDESGK 77 (619)
Q Consensus 52 m~~~~~lgIDiGTTsiKa~l~d~~g~ 77 (619)
|+|..++|||+|||+..+++++ +|+
T Consensus 1 M~m~~~iGIDlGTt~s~va~~~-~g~ 25 (554)
T 1yuw_A 1 MSKGPAVGIDLGTTYSCVGVFQ-HGK 25 (554)
T ss_dssp CCSCCCEEEEECSSEEEEEEEC-SSS
T ss_pred CCCCCEEEEEeCcccEEEEEEE-CCE
Confidence 5555689999999999999986 344
No 115
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=68.58 E-value=3.8 Score=43.61 Aligned_cols=59 Identities=10% Similarity=0.199 Sum_probs=36.1
Q ss_pred CCeEEEEEcCCcceEEEEEcC-CC-----CEEEEEEeecccccCCCc--cccCHHHHHHHHHHHHHHHH
Q 007076 54 RSVFLGVDVGTGSARAGLFDE-SG-----KLLGSASSPIQIWKEGDC--IEQSSTDIWHAICAAVDSAC 114 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~-~g-----~il~~~~~~~~~~~~~g~--~e~dp~~~~~~~~~~l~~~~ 114 (619)
.+|.+.||+||+++|..|++- ++ .++.... .... ..+|. ...+|+.+.+.+..+++.+.
T Consensus 33 ~~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~-~~~~-~~~Gls~~~~~pe~~~~~l~~Ll~~a~ 99 (456)
T 3cj1_A 33 LKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHS-SCDV-QGGGISSYANDPSKAGQSLVRCLEQAL 99 (456)
T ss_dssp EEEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEE-EEEC-SSSCGGGGTTSTHHHHHHTHHHHHHHH
T ss_pred ceEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeee-eeee-cccccccccCCHHHHHHHHHHHHHHHH
Confidence 368999999999999999983 22 1332211 1111 02332 22468888887777776654
No 116
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=68.48 E-value=11 Score=40.75 Aligned_cols=86 Identities=12% Similarity=0.049 Sum_probs=52.1
Q ss_pred EeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---C--CCcCEEEEecCCcCCHHHHHHHHhhhCC-ceeec
Q 007076 470 GIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH---G--HKIDTLLACGGLAKNPLFLQQHADIIGC-PIILP 543 (619)
Q Consensus 470 g~~~Gl~~~~~~~~l~~~~rAvlEgiaf~~~~~l~~l~~~---g--~~~~~I~~~GG~a~s~~~~Qi~Advlg~-pV~~~ 543 (619)
..+..+...++-++ .++.|--..-..|- +..++.+... + ..+..|+++||+|.-+-+.|+..++|+. +|++-
T Consensus 503 ~~L~~I~pR~~vEE-lelVR~~ak~~vfv-~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiG 580 (610)
T 2d0o_A 503 DELVPLPGDLALEK-VRAIRRSAKERVFV-TNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAG 580 (610)
T ss_dssp SCEEECCTTCCHHH-HHHHHHHHHHHHHH-HHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEE
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhh-HHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEe
Confidence 55667744433555 44445443333332 2234544331 2 1358999999999999999999999999 99764
Q ss_pred CCCCccchHHHHHH
Q 007076 544 RENESVLLGAAILG 557 (619)
Q Consensus 544 ~~~e~~alGAAllA 557 (619)
....-++.|-++..
T Consensus 581 rP~~~gv~gP~fAt 594 (610)
T 2d0o_A 581 RGNIRGSEGPRNAV 594 (610)
T ss_dssp ECCGGGTSTTSCHH
T ss_pred cCCccccCCCcHHH
Confidence 43333333433333
No 117
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=68.16 E-value=14 Score=33.00 Aligned_cols=53 Identities=21% Similarity=0.278 Sum_probs=33.7
Q ss_pred EEEEEcCCcceEEEEEcCCCCEEE---EEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHc
Q 007076 57 FLGVDVGTGSARAGLFDESGKLLG---SASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLA 117 (619)
Q Consensus 57 ~lgIDiGTTsiKa~l~d~~g~il~---~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~ 117 (619)
+||||-|++++-.++++.+|+.+. .....++ ..+..+=+..+.+.+.+++++.
T Consensus 3 ILGIDPGl~~tG~gvi~~~g~~~~~v~~G~i~t~--------~~~~~~Rl~~i~~~l~~~i~~~ 58 (158)
T 1hjr_A 3 ILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTK--------VDDLPSRLKLIYAGVTEIITQF 58 (158)
T ss_dssp EEEEECCSSEEEEEEEEEETTEEEEEEEEEEECC--------CSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEccCCCCeeEEEEEecCCeEEEEEeeEEECC--------CCCHHHHHHHHHHHHHHHHHHc
Confidence 899999999999999997776332 2222222 1233334455666667777664
No 118
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=68.00 E-value=2.4 Score=43.85 Aligned_cols=22 Identities=27% Similarity=0.602 Sum_probs=18.5
Q ss_pred CeEEEEEcCCcceEEEEEcCCCC
Q 007076 55 SVFLGVDVGTGSARAGLFDESGK 77 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~g~ 77 (619)
+.++|||+|||++++++++ +|+
T Consensus 18 ~~viGID~GTt~s~va~~~-~g~ 39 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK-NGK 39 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC-SSC
T ss_pred CCEEEEEeCcCcEEEEEEE-CCe
Confidence 4589999999999999986 444
No 119
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=67.44 E-value=9.9 Score=41.00 Aligned_cols=72 Identities=13% Similarity=0.069 Sum_probs=40.1
Q ss_pred CeEEEEEcCCcceEEEEEcCC-C--CEEEEEEeecccccCCCc---cccCHHHHHHHHHHHHHH---HHHHcCCCCCCEE
Q 007076 55 SVFLGVDVGTGSARAGLFDES-G--KLLGSASSPIQIWKEGDC---IEQSSTDIWHAICAAVDS---ACSLANVDGEEVK 125 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d~~-g--~il~~~~~~~~~~~~~g~---~e~dp~~~~~~~~~~l~~---~~~~~~~~~~~I~ 125 (619)
+.+.+|||||.|+|.++++.. + +++...+..+.. ..|. -..+++. .+..++++++ .++..+ ..+|.
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrL--g~gl~~~g~Ls~ea-i~r~~~~L~~F~~~~~~~~--v~~v~ 89 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGL--GKGLALTGRMHEEG-VTRALMALRRFHVLSEQAQ--AQKLY 89 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCT--TTTHHHHSSCCHHH-HHHHHHHHHHHHHHHHHTT--CSEEE
T ss_pred CeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeec--ccCccccCCcCHHH-HHHHHHHHHHHHHHHHhCC--CCeEE
Confidence 348899999999999999943 3 344444443332 1111 1223333 3344455544 444443 35677
Q ss_pred EEEEcC
Q 007076 126 GVGFAA 131 (619)
Q Consensus 126 aIgis~ 131 (619)
+++-++
T Consensus 90 ~vATsA 95 (508)
T 3hi0_A 90 VLATAA 95 (508)
T ss_dssp EEECTH
T ss_pred EEeeHH
Confidence 777654
No 120
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=66.02 E-value=12 Score=32.66 Aligned_cols=23 Identities=17% Similarity=0.173 Sum_probs=20.5
Q ss_pred eEEEEEcCCcceEEEEEcCCCCE
Q 007076 56 VFLGVDVGTGSARAGLFDESGKL 78 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~i 78 (619)
.+||||+|+..|-+++-|..+.+
T Consensus 4 ~iLglD~G~kriGvAvsd~~~~~ 26 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRITGT 26 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTTTE
T ss_pred eEEEEEeCCCEEEEEEEcCCCCE
Confidence 48999999999999999987764
No 121
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=65.51 E-value=17 Score=36.62 Aligned_cols=71 Identities=17% Similarity=0.061 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcC--------EEEEecCCcCC-HHHHHHH----Hhhh-------CCceeecCCCCcc
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKID--------TLLACGGLAKN-PLFLQQH----ADII-------GCPIILPRENESV 549 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~--------~I~~~GG~a~s-~~~~Qi~----Advl-------g~pV~~~~~~e~~ 549 (619)
.+++-.+..+...+..+... ..++ .|++.||.+++ +.+.+.+ .... ..+|++....+++
T Consensus 236 ~il~~~~~~La~~i~~l~~~-~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~a~ 314 (347)
T 2ch5_A 236 YIFRKAGEMLGRHIVAVLPE-IDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSS 314 (347)
T ss_dssp HHHHHHHHHHHHHHHHHGGG-SCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESSCT
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCCCh
Confidence 55555555555555444321 3455 78888888754 5444332 2221 2356655555678
Q ss_pred chHHHHHHHhhc
Q 007076 550 LLGAAILGAVAA 561 (619)
Q Consensus 550 alGAAllA~~~~ 561 (619)
++|||.++....
T Consensus 315 ~~GAa~la~~~~ 326 (347)
T 2ch5_A 315 ALGGASLGARHI 326 (347)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc
Confidence 899999987654
No 122
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=64.95 E-value=13 Score=36.66 Aligned_cols=70 Identities=16% Similarity=0.135 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhC------CceeecC-CCCccchHHHHHHHhh
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG------CPIILPR-ENESVLLGAAILGAVA 560 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg------~pV~~~~-~~e~~alGAAllA~~~ 560 (619)
.+++-.+..+...+-.+... ..++.|++.||.++.+.+.+.+-..+. .+|+.+. ..++.++|||.++...
T Consensus 216 ~~~~~~~~~La~~i~~l~~~-~~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 216 RLITEFYTGICTGLYNLIYL-FDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 44444444444433333221 246789999998876656554444432 2455554 3457889999988654
No 123
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=63.56 E-value=6.8 Score=45.82 Aligned_cols=30 Identities=13% Similarity=0.223 Sum_probs=25.9
Q ss_pred CeEEEEEcCC-----cceEEEEEcCCCCEEEEEEe
Q 007076 55 SVFLGVDVGT-----GSARAGLFDESGKLLGSASS 84 (619)
Q Consensus 55 ~~~lgIDiGT-----TsiKa~l~d~~g~il~~~~~ 84 (619)
+.++|||-|- |.+|++++|++|+++.....
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i 553 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 553 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEE
T ss_pred CeEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEE
Confidence 4599999984 48999999999999997765
No 124
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=62.68 E-value=14 Score=37.04 Aligned_cols=69 Identities=20% Similarity=0.144 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCC-HHHHHHHHhhh----------CCceeecCC-CCccchHHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII----------GCPIILPRE-NESVLLGAAILG 557 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s-~~~~Qi~Advl----------g~pV~~~~~-~e~~alGAAllA 557 (619)
.+++-.+..+...+..+... ..++.|++.||.++. +.+.+.+.+.+ ..+|..... .++.++|||.++
T Consensus 239 ~~~~~~~~~La~~i~~l~~~-ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 239 AVWADIGTIIGESLVNIVRV-MDLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 44444444444444333221 246789999998876 55554443322 234555553 457789999987
Q ss_pred Hh
Q 007076 558 AV 559 (619)
Q Consensus 558 ~~ 559 (619)
..
T Consensus 318 ~~ 319 (321)
T 3r8e_A 318 ME 319 (321)
T ss_dssp HC
T ss_pred Hh
Confidence 53
No 125
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=60.16 E-value=13 Score=36.45 Aligned_cols=68 Identities=15% Similarity=0.250 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhC-------CceeecC-CCCccchHHHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG-------CPIILPR-ENESVLLGAAILGA 558 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg-------~pV~~~~-~~e~~alGAAllA~ 558 (619)
.+++-.+..+...+..+... ..++.|++.||.+.++.+.+.+...+. .+|+.+. ..+++++|||.++.
T Consensus 212 ~i~~~~~~~L~~~i~~l~~~-l~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 212 QLIHRSARTLARLIADIKAT-TDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 34444444444433333221 245678888888766666655544332 3454444 34577899998864
No 126
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=59.28 E-value=12 Score=30.58 Aligned_cols=22 Identities=23% Similarity=0.211 Sum_probs=19.8
Q ss_pred EEEEEcCCcceEEEEEcCCCCE
Q 007076 57 FLGVDVGTGSARAGLFDESGKL 78 (619)
Q Consensus 57 ~lgIDiGTTsiKa~l~d~~g~i 78 (619)
+||||+|+..+-+++-|..+.+
T Consensus 3 iLglD~G~kriGvAvsd~~~~~ 24 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEEGVPL 24 (98)
T ss_dssp EEEEEESSSEEEEEEECSCCSS
T ss_pred EEEEEeCCCEEEEEEEeCCCCe
Confidence 8999999999999999987753
No 127
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=58.87 E-value=18 Score=38.71 Aligned_cols=83 Identities=20% Similarity=0.300 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhCCCCcCEEEEecCCc-CCHHHHHH----HHhhh--------CCce
Q 007076 479 SSEKQLALLYLATVQGIAYGTRHIVE-----HCNAHGHKIDTLLACGGLA-KNPLFLQQ----HADII--------GCPI 540 (619)
Q Consensus 479 ~~~~~l~~~~rAvlEgiaf~~~~~l~-----~l~~~g~~~~~I~~~GG~a-~s~~~~Qi----~Advl--------g~pV 540 (619)
.+..| ..++|-+.+.|.-...+++- .+.+.+...-.|-+.|+.- +.|.+.+. +.+++ +.+|
T Consensus 372 ~t~~d-~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v 450 (485)
T 3o8m_A 372 TTVVE-RKLIRKLAELVGTRAARLTVCGVSAICDKRGYKTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPI 450 (485)
T ss_dssp CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSE
T ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceE
Confidence 44455 33566777776655444332 2233444333455678865 45555554 44444 3678
Q ss_pred eecCCCCccchHHHHHHHhhcc
Q 007076 541 ILPRENESVLLGAAILGAVAAK 562 (619)
Q Consensus 541 ~~~~~~e~~alGAAllA~~~~G 562 (619)
......+++.+|||++|+++..
T Consensus 451 ~l~~a~DGSg~GAAliAa~a~~ 472 (485)
T 3o8m_A 451 QLVAAEDGSGVGAAIIACLTQK 472 (485)
T ss_dssp EEEECCCTTTHHHHHHHHHHHH
T ss_pred EEEEcCCChHHHHHHHHHHHHH
Confidence 8777899999999999998753
No 128
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=58.87 E-value=26 Score=36.45 Aligned_cols=46 Identities=13% Similarity=0.218 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCc-CCHHHHHHHHhhh
Q 007076 490 ATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADII 536 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~-~g~~~~~I~~~GG~a-~s~~~~Qi~Advl 536 (619)
-++|-.+|+++..+-.+-. .| .++.|+++||.. +++.+++.+.+-+
T Consensus 308 lA~d~f~yri~k~IGa~aa~Lg-gvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 308 LAIKTFVHRIARHIAGHAASLH-RLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCCEEEECccccccCHHHHHHHHhhH
Confidence 5889999999887766644 43 588999999998 8888888776654
No 129
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=57.94 E-value=5.6 Score=40.99 Aligned_cols=46 Identities=26% Similarity=0.366 Sum_probs=35.5
Q ss_pred CEEEEecCCcCCHHHHHHHHhhhC--------CceeecC-CCCccchHHHHHHHh
Q 007076 514 DTLLACGGLAKNPLFLQQHADIIG--------CPIILPR-ENESVLLGAAILGAV 559 (619)
Q Consensus 514 ~~I~~~GG~a~s~~~~Qi~Advlg--------~pV~~~~-~~e~~alGAAllA~~ 559 (619)
++|+++||.|+-+-+.+.+.+-++ .+|..+. ...++++|++++|..
T Consensus 295 ~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 295 ANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp TCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHC
T ss_pred hCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCc
Confidence 579999999999999988888776 3343333 345788999999974
No 130
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=57.54 E-value=25 Score=34.43 Aligned_cols=48 Identities=19% Similarity=0.191 Sum_probs=30.9
Q ss_pred CcCEEEEecCCcCCHHHHHHHHhhh------------CCceeecC-CCCccchHHHHHHHh
Q 007076 512 KIDTLLACGGLAKNPLFLQQHADII------------GCPIILPR-ENESVLLGAAILGAV 559 (619)
Q Consensus 512 ~~~~I~~~GG~a~s~~~~Qi~Advl------------g~pV~~~~-~~e~~alGAAllA~~ 559 (619)
.++.|++.||.+..+.+.+.+...+ ..+|+.+. ..++.++|||.++..
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 4678988898876666654333321 24565554 345778999998754
No 131
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=56.53 E-value=33 Score=34.40 Aligned_cols=67 Identities=15% Similarity=0.135 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHh----h-h----CCceeecCCCCccchHHHHHHHh
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHAD----I-I----GCPIILPRENESVLLGAAILGAV 559 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Ad----v-l----g~pV~~~~~~e~~alGAAllA~~ 559 (619)
.+++-.+..+...+..+... ..++.|++.||.+ +.+.+.+.. . + ..+|+.+...+.+++|||.++..
T Consensus 263 ~il~~~~~~La~~i~~l~~~-l~P~~IvlgG~i~--~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~~~~GAa~l~~~ 338 (343)
T 2yhw_A 263 SILRTAGTALGLGVVNILHT-MNPSLVILSGVLA--SHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLD 338 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCCSEEEEESTTH--HHHHHHHHHHHHHHSCGGGTTCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCCcH--HHHHHHHHHHHHHhcccccCCcEEEEccCCCchHHHHHHHHHH
Confidence 45555555555544443321 3567888888876 334333222 1 1 34666666567778999998764
No 132
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=56.38 E-value=12 Score=37.65 Aligned_cols=47 Identities=21% Similarity=0.275 Sum_probs=29.5
Q ss_pred CcCEEEEecCCcCCHHHHHHHHhhh---------CCceeecCC-CCccchHHHHHHH
Q 007076 512 KIDTLLACGGLAKNPLFLQQHADII---------GCPIILPRE-NESVLLGAAILGA 558 (619)
Q Consensus 512 ~~~~I~~~GG~a~s~~~~Qi~Advl---------g~pV~~~~~-~e~~alGAAllA~ 558 (619)
.++.|++.||.++.+.+.+.+.+.+ ..+|+.+.. .+++++|||.++.
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~l 325 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLNI 325 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHHh
Confidence 4678989898887665555444332 223444442 4577889998764
No 133
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=56.03 E-value=4.1 Score=41.98 Aligned_cols=21 Identities=24% Similarity=0.559 Sum_probs=17.7
Q ss_pred eEEEEEcCCcceEEEEEcCCCC
Q 007076 56 VFLGVDVGTGSARAGLFDESGK 77 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~ 77 (619)
.++|||+|||++++++++ +|+
T Consensus 3 ~~vGIDlGTt~s~va~~~-~g~ 23 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMD-GTT 23 (383)
T ss_dssp CCCEEECCSSEEEEEEEE-TTE
T ss_pred cEEEEEcCCCCEEEEEEE-CCe
Confidence 378999999999999986 453
No 134
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=55.63 E-value=19 Score=35.73 Aligned_cols=69 Identities=17% Similarity=0.236 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcC-CHHHHHHHHhhh----------CCceeecC-CCCccchHHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAK-NPLFLQQHADII----------GCPIILPR-ENESVLLGAAILG 557 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~-s~~~~Qi~Advl----------g~pV~~~~-~~e~~alGAAllA 557 (619)
.+++-.+..+...+..+... ..++.|++.||.++ ++.+.+.+...+ ..+|..+. ..++.++|||.++
T Consensus 241 ~i~~~~~~~L~~~i~~l~~~-l~p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 319 (326)
T 2qm1_A 241 MVVDRVCFYLGLATGNLGNT-LNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLA 319 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHH
Confidence 44554444444444333221 24578999999875 565554443322 24565554 3456789999887
Q ss_pred Hh
Q 007076 558 AV 559 (619)
Q Consensus 558 ~~ 559 (619)
..
T Consensus 320 ~~ 321 (326)
T 2qm1_A 320 LQ 321 (326)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 135
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=55.29 E-value=18 Score=36.19 Aligned_cols=71 Identities=14% Similarity=0.185 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCC-HHHHHHHHhhh-----------CCceeecC-CCCccchHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII-----------GCPIILPR-ENESVLLGAAIL 556 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s-~~~~Qi~Advl-----------g~pV~~~~-~~e~~alGAAll 556 (619)
.+++-.+..+...+..+... ..++.|++.||.+++ +.+.+.+-+.+ ..+|+... ..++.++|||.+
T Consensus 231 ~~~~~~~~~La~~i~~l~~~-l~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l 309 (321)
T 3vgl_A 231 DSFRELARWAGAGLADLASL-FDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADL 309 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHH
Confidence 44554444444444433321 246789999998865 55443332221 12455555 356778999999
Q ss_pred HHhhc
Q 007076 557 GAVAA 561 (619)
Q Consensus 557 A~~~~ 561 (619)
+..++
T Consensus 310 ~~~~~ 314 (321)
T 3vgl_A 310 ARQGL 314 (321)
T ss_dssp HHTC-
T ss_pred HHhhh
Confidence 87765
No 136
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=54.67 E-value=35 Score=36.09 Aligned_cols=81 Identities=16% Similarity=0.161 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhCCCCcCEEEEecCCcCCHHHHHHHH----hhh--------CCceee
Q 007076 480 SEKQLALLYLATVQGIAYGTRHIV-----EHCNAHGHKIDTLLACGGLAKNPLFLQQHA----DII--------GCPIIL 542 (619)
Q Consensus 480 ~~~~l~~~~rAvlEgiaf~~~~~l-----~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~A----dvl--------g~pV~~ 542 (619)
+..|. +++|.+.+.|.-...+++ ..+...+.....|.+.||.-+.+.+.+.+. +++ +.+|..
T Consensus 347 t~~D~-~~v~~ia~~V~~RaA~l~A~~iaai~~~~~~~~~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~ 425 (457)
T 2yhx_A 347 KTXMK-XVVRRXLFLIAAYAFRLVVCXIXAICQKKGYSSGHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXI 425 (457)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSSEEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEE
T ss_pred cchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEE
Confidence 44553 234455544444333322 222333433356777777734455555444 666 447877
Q ss_pred cCCCCccchHHHHHHHhhc
Q 007076 543 PRENESVLLGAAILGAVAA 561 (619)
Q Consensus 543 ~~~~e~~alGAAllA~~~~ 561 (619)
...++++.+|||++|+++.
T Consensus 426 ~~~~dgsg~GAAl~aa~~~ 444 (457)
T 2yhx_A 426 TPAIDGXGAASXVIXSIAS 444 (457)
T ss_dssp EECCCTTTHHHHHHHHHHH
T ss_pred EECCCchhhhHHHHHHHHh
Confidence 7788999999999999864
No 137
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=54.46 E-value=27 Score=35.61 Aligned_cols=19 Identities=21% Similarity=0.450 Sum_probs=17.6
Q ss_pred CeEEEEEcCCcceEEEEEc
Q 007076 55 SVFLGVDVGTGSARAGLFD 73 (619)
Q Consensus 55 ~~~lgIDiGTTsiKa~l~d 73 (619)
.+++.||+||+++|..|++
T Consensus 3 ~~~avID~GSns~Rl~I~~ 21 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYS 21 (353)
T ss_dssp EEEEEEEECSSCEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEE
Confidence 4689999999999999998
No 138
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=53.67 E-value=6 Score=41.02 Aligned_cols=21 Identities=38% Similarity=0.729 Sum_probs=17.7
Q ss_pred eEEEEEcCCcceEEEEEcCCCC
Q 007076 56 VFLGVDVGTGSARAGLFDESGK 77 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~ 77 (619)
.++|||+|||++++++++ +|+
T Consensus 24 ~viGID~GTt~s~va~~~-~g~ 44 (404)
T 3i33_A 24 PAIGIDLGTTYSCVGVFQ-HGK 44 (404)
T ss_dssp CCEEEEECSSEEEEEEEE-TTE
T ss_pred CEEEEEcCCccEEEEEEE-CCe
Confidence 389999999999999886 443
No 139
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=53.60 E-value=18 Score=35.65 Aligned_cols=70 Identities=10% Similarity=-0.188 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCC--HHHHHHHHhhhCCceeecCCCCccchHHHHHHHhhccc
Q 007076 489 LATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN--PLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKR 563 (619)
Q Consensus 489 rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s--~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~~~G~ 563 (619)
+.+++-.+..+...+ .+. .-.+++.|++.||.+++ +.+.+.+.... .++..+ .++...||+.+|....++
T Consensus 213 ~~i~~~~~~~La~~i-~~~-~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i~~~--~~a~~~GA~~la~~~~~~ 284 (291)
T 1zbs_A 213 YSLVQNSFDDFLVRN-VLR-YNRPDLPLHFIGSVAFHYREVLSSVIKKRG-LTLGSV--LQSPMEGLIQYHHNNHVL 284 (291)
T ss_dssp HHHHHHHHHHHHHHH-TGG-GCCTTSCEEEESHHHHHTHHHHHHHHHHTT-CCEEEE--ESCSHHHHHHHHHHCCC-
T ss_pred HHHHHHHHHHHHHHH-hcc-cCCCCceEEEECchHHhhHHHHHHHHHHcC-Ceeccc--CcCHHHHHHHHHHhhhhh
Confidence 467777776666666 332 11257789999998877 44444444322 244333 378899999998765543
No 140
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=53.36 E-value=8.6 Score=38.53 Aligned_cols=23 Identities=13% Similarity=0.271 Sum_probs=19.8
Q ss_pred EEEEEcCCcceEEEEEcCCCCEE
Q 007076 57 FLGVDVGTGSARAGLFDESGKLL 79 (619)
Q Consensus 57 ~lgIDiGTTsiKa~l~d~~g~il 79 (619)
++|||+|++++|++..+++|++.
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~ 24 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIK 24 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEE
T ss_pred eEEEecCCccceEEEecCCCEEE
Confidence 68999999999999877788753
No 141
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=53.34 E-value=6.7 Score=43.36 Aligned_cols=18 Identities=28% Similarity=0.663 Sum_probs=16.4
Q ss_pred eEEEEEcCCcceEEEEEc
Q 007076 56 VFLGVDVGTGSARAGLFD 73 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d 73 (619)
+++|||+|||+.++++++
T Consensus 3 ~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CEEEEECCSSEEEEEEEE
T ss_pred cEEEEEcCCCcEEEEEEE
Confidence 589999999999999885
No 142
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=53.14 E-value=17 Score=37.34 Aligned_cols=76 Identities=17% Similarity=0.184 Sum_probs=51.5
Q ss_pred CeEEEEEcCCc--ceEEEEEcCCC--CEEEEEEeecccc------c--CCCccccCHH-------HHHHHHHHHHHHHHH
Q 007076 55 SVFLGVDVGTG--SARAGLFDESG--KLLGSASSPIQIW------K--EGDCIEQSST-------DIWHAICAAVDSACS 115 (619)
Q Consensus 55 ~~~lgIDiGTT--siKa~l~d~~g--~il~~~~~~~~~~------~--~~g~~e~dp~-------~~~~~~~~~l~~~~~ 115 (619)
.++||+=.||| +|-+++++-++ +++.....||+.. . .++. .+++ ++=+...++++++++
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~~~l~~~~~~py~~~lr~~l~~~~~~~~--~~~~~~~~l~~~lg~~~a~av~~~l~ 79 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLREDILALCVPGP--DEIARAAEVEQRWVALAAQGVRELLL 79 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSSEEEEEEEEEECCHHHHHHHHHTTSCCB--THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccChhhhhEEEEEecCCceecceeeecCCHHHHHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999998 68888887555 5667777888621 1 1111 1122 223445577788888
Q ss_pred HcCCCCCCEEEEEEcCc
Q 007076 116 LANVDGEEVKGVGFAAT 132 (619)
Q Consensus 116 ~~~~~~~~I~aIgis~~ 132 (619)
+.++++++|.+||.-+|
T Consensus 80 ~~~~~~~~Id~IGsHGQ 96 (371)
T 3qbx_A 80 QQQMSPDEVRAIGSHGQ 96 (371)
T ss_dssp HTTCCGGGCCEEEECCE
T ss_pred HcCCCcccccEEEeCCc
Confidence 88888889999998765
No 143
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=52.53 E-value=13 Score=44.13 Aligned_cols=30 Identities=13% Similarity=0.223 Sum_probs=25.9
Q ss_pred CeEEEEEcCC-----cceEEEEEcCCCCEEEEEEe
Q 007076 55 SVFLGVDVGT-----GSARAGLFDESGKLLGSASS 84 (619)
Q Consensus 55 ~~~lgIDiGT-----TsiKa~l~d~~g~il~~~~~ 84 (619)
+.+||||-|- |++|++++|++|+++.....
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i 550 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 550 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEE
T ss_pred CeEEEecCCCCCCCCCceEEEEECCCCCEEEEEEE
Confidence 4599999985 48999999999999997765
No 144
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=52.43 E-value=50 Score=32.70 Aligned_cols=65 Identities=17% Similarity=0.223 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCH-----HHHHHHHhhhC-------CceeecC-CCCccchHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNP-----LFLQQHADIIG-------CPIILPR-ENESVLLGAAIL 556 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~-----~~~Qi~Advlg-------~pV~~~~-~~e~~alGAAll 556 (619)
.+++-++..+..++..+ .++.|++.||.++.. .+.+.+...+. .+|+... ..++.++|||.+
T Consensus 222 ~~~~~~a~~la~l~~~~-----dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~l 296 (310)
T 3htv_A 222 SLLENAARAIATSINLF-----DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAIL 296 (310)
T ss_dssp HHHHHHHHHHHHHHHHH-----CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh-----CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHH
Confidence 55565655555444433 467888889888652 34444433332 2344433 346788999998
Q ss_pred HHh
Q 007076 557 GAV 559 (619)
Q Consensus 557 A~~ 559 (619)
+..
T Consensus 297 a~~ 299 (310)
T 3htv_A 297 AHQ 299 (310)
T ss_dssp HHH
T ss_pred HHH
Confidence 865
No 145
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=51.90 E-value=16 Score=31.91 Aligned_cols=37 Identities=8% Similarity=0.223 Sum_probs=33.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 96 EQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 96 e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
+.+++++++++.+++.+++++.++++++|..|=+|.+
T Consensus 43 ~Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT 79 (148)
T 1xho_A 43 DNTADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVT 79 (148)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 4578999999999999999999999999999999865
No 146
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=50.11 E-value=27 Score=35.02 Aligned_cols=49 Identities=18% Similarity=0.248 Sum_probs=30.2
Q ss_pred CcCE-EEEecCCcCC--HH-----HHHHHHh------h-hCCceeecCCCCccchHHHHHHHhh
Q 007076 512 KIDT-LLACGGLAKN--PL-----FLQQHAD------I-IGCPIILPRENESVLLGAAILGAVA 560 (619)
Q Consensus 512 ~~~~-I~~~GG~a~s--~~-----~~Qi~Ad------v-lg~pV~~~~~~e~~alGAAllA~~~ 560 (619)
.++. |++.||.+.. ++ +.+.+.+ . -..||......++.++|||.++...
T Consensus 264 ~P~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~l~GAa~l~~~~ 327 (332)
T 1sz2_A 264 GTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQT 327 (332)
T ss_dssp TCTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCchhHHHHHHHHHHh
Confidence 3555 8899998754 22 2333321 1 2456766555678899999987643
No 147
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=49.87 E-value=38 Score=34.74 Aligned_cols=69 Identities=16% Similarity=0.257 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCcCCHH-HHHHHHhhhCC--ceeec--CCC-CccchHHHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLAKNPL-FLQQHADIIGC--PIILP--REN-ESVLLGAAILGA 558 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~-~g~~~~~I~~~GG~a~s~~-~~Qi~Advlg~--pV~~~--~~~-e~~alGAAllA~ 558 (619)
.+++-.+..+...+-.+.. .+..++.|++.||.+++.. +.+.+.+.+.. |+.+. ... ++.++|||.++.
T Consensus 272 ~~l~~~~~~la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 272 RVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5566666666555544433 2236789999999886533 55544444332 44333 222 367889988763
No 148
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=49.39 E-value=10 Score=40.19 Aligned_cols=60 Identities=8% Similarity=0.033 Sum_probs=37.0
Q ss_pred CCeEEEEEcCCcceEEEEEcC-CC-----CEEEEEEeecccccCCCc--cccCHHHHHHHHHHHHHHHHH
Q 007076 54 RSVFLGVDVGTGSARAGLFDE-SG-----KLLGSASSPIQIWKEGDC--IEQSSTDIWHAICAAVDSACS 115 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d~-~g-----~il~~~~~~~~~~~~~g~--~e~dp~~~~~~~~~~l~~~~~ 115 (619)
.+|.+.||+|+|++|..||.- .. .++.+. ...-...||. ...+|+.+.+.+..+++.+.+
T Consensus 33 ~~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~~--~~~k~~gpGlSs~~~~p~~~~~~l~~Ll~~a~~ 100 (452)
T 3zx3_A 33 VKYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQL--EECQVKGPGISKYAQKTDEIAAYLAECMKMSTE 100 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEEEECCCTTCCCCCEEE--EEEECSSSCGGGGTTCGGGHHHHHHHHHHHHHH
T ss_pred ceEEEEEEcCCCCcEEEEEEEeCCcCCCcccccee--eeecccCCChhccCCCHHHHHHHHHHHHHHHHH
Confidence 368899999999999999982 21 122211 0100112452 224788888888777776654
No 149
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=48.38 E-value=4.2 Score=38.90 Aligned_cols=21 Identities=43% Similarity=0.646 Sum_probs=10.8
Q ss_pred EEEcCCcce--------EEEEEcCCCCEE
Q 007076 59 GVDVGTGSA--------RAGLFDESGKLL 79 (619)
Q Consensus 59 gIDiGTTsi--------Ka~l~d~~g~il 79 (619)
|+|+||.++ |+++||-+|.++
T Consensus 10 ~~~~~~~~~~~~~~~MIKaViFDlDGTLv 38 (250)
T 4gib_A 10 GVDLGTENLYFQSNAMIEAFIFDLDGVIT 38 (250)
T ss_dssp --------------CCCCEEEECTBTTTB
T ss_pred cccCCCCCcccCccchhheeeecCCCccc
Confidence 899999997 899999999875
No 150
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=48.34 E-value=8.1 Score=39.03 Aligned_cols=23 Identities=9% Similarity=-0.013 Sum_probs=18.2
Q ss_pred CCCCCCeEEEEEcCCcceEEEEE
Q 007076 50 PARSRSVFLGVDVGTGSARAGLF 72 (619)
Q Consensus 50 ~~m~~~~~lgIDiGTTsiKa~l~ 72 (619)
++|+++++||||+|-.++|++..
T Consensus 2 ~~~~~~~iigiD~G~~~~K~~~~ 24 (329)
T 4apw_A 2 ENITNEYVMTLDAGKYETKLIGK 24 (329)
T ss_dssp ---CCEEEEEEEECSSEEEEEEH
T ss_pred CCccCceEEEEecCCceEEEEec
Confidence 46788899999999999999863
No 151
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=47.93 E-value=20 Score=30.66 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=33.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCc
Q 007076 96 EQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (619)
Q Consensus 96 e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (619)
+.+++++++++.+++.+++++.++++++|.+|=+|.+
T Consensus 14 ~Nt~e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T 50 (127)
T 1dbf_A 14 RDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT 50 (127)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 4578999999999999999999999999999999865
No 152
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=46.06 E-value=11 Score=40.73 Aligned_cols=19 Identities=21% Similarity=0.569 Sum_probs=16.8
Q ss_pred eEEEEEcCCcceEEEEEcC
Q 007076 56 VFLGVDVGTGSARAGLFDE 74 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~ 74 (619)
.++|||+|||++++++++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 3899999999999998863
No 153
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=45.76 E-value=25 Score=29.82 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=33.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEEcCc
Q 007076 96 EQSSTDIWHAICAAVDSACSLANVDG-EEVKGVGFAAT 132 (619)
Q Consensus 96 e~dp~~~~~~~~~~l~~~~~~~~~~~-~~I~aIgis~~ 132 (619)
+.+++++++++.+++.+++++.++++ ++|.+|=+|.+
T Consensus 13 ~n~~e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T 50 (122)
T 1ufy_A 13 EDTPEAIHQATRELLLKMLEANGIQSYEELAAVIFTVT 50 (122)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeC
Confidence 45789999999999999999999999 99999999865
No 154
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=44.69 E-value=47 Score=33.95 Aligned_cols=48 Identities=15% Similarity=0.221 Sum_probs=30.0
Q ss_pred CcCEEEEecCCcCC-HHHHHHHHhhh--------CCceeecC-CCCccchHHHHHHHh
Q 007076 512 KIDTLLACGGLAKN-PLFLQQHADII--------GCPIILPR-ENESVLLGAAILGAV 559 (619)
Q Consensus 512 ~~~~I~~~GG~a~s-~~~~Qi~Advl--------g~pV~~~~-~~e~~alGAAllA~~ 559 (619)
.++.|++.||.++. +.+.+.+...+ ..+|+... ..++.++|||.++..
T Consensus 314 dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~~ 371 (380)
T 2hoe_A 314 GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHALE 371 (380)
T ss_dssp CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHHH
T ss_pred CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 45788888988764 55544433322 23555554 345688999998754
No 155
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=43.73 E-value=9.4 Score=42.77 Aligned_cols=18 Identities=17% Similarity=0.372 Sum_probs=16.2
Q ss_pred EEEEEcCCcceEEEEEcC
Q 007076 57 FLGVDVGTGSARAGLFDE 74 (619)
Q Consensus 57 ~lgIDiGTTsiKa~l~d~ 74 (619)
+||||+|||+.++++++.
T Consensus 4 ~iGIDlGTtns~va~~~~ 21 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARN 21 (675)
T ss_dssp CEEEECCSSEEEEEEEET
T ss_pred EEEEEcCCCcEEEEEEEC
Confidence 899999999999998764
No 156
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=42.70 E-value=42 Score=36.20 Aligned_cols=66 Identities=20% Similarity=0.187 Sum_probs=36.3
Q ss_pred CCeEEEEEcCCcceEEEEEc--CCCCE--EEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 007076 54 RSVFLGVDVGTGSARAGLFD--ESGKL--LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKG 126 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d--~~g~i--l~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~~~~~I~a 126 (619)
|+|+.|||||.+++-++|-+ .+|++ +.+.-.++. --.| ..++..-+.. +|++++++.+...+++.-
T Consensus 1 m~~i~gvdign~tte~~la~~~~~~~~~f~~s~~~~tt--g~kg-t~~n~~g~~~----~l~~~~~~~~~~~~~~~l 70 (610)
T 2d0o_A 1 MRYIAGIDIGNSSTEVALATLDEAGALTITHSALAETT--GIKG-TLRNVFGIQE----ALALVARGAGIAVSDISL 70 (610)
T ss_dssp CEEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECC--SSTT-STTHHHHHHH----HHHHHHHHHTCCGGGEEE
T ss_pred CcEEEEEecCCcchheeeeeecCCCceEEeeccccccC--CccC-cHHHHHHHHH----HHHHHHHHcCCChhhcee
Confidence 36899999998887777654 44654 333333332 1111 2344444444 455555555544444443
No 157
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=41.22 E-value=29 Score=35.64 Aligned_cols=51 Identities=16% Similarity=0.215 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCc-CCHHHHHHHHhh---hCCce
Q 007076 489 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADI---IGCPI 540 (619)
Q Consensus 489 rAvlEgiaf~~~~~l~~l~~-~g~~~~~I~~~GG~a-~s~~~~Qi~Adv---lg~pV 540 (619)
+-++|..+|+++..+-.+-. .+ .++.|+++||.. .++.+++.+.+- +|..+
T Consensus 290 ~lA~d~f~yri~k~IGa~aa~L~-gvDaIVFTgGIgEns~~iR~~i~~~l~~lGi~l 345 (384)
T 3khy_A 290 KLAIEIFSHRVAKFVASYMIYFN-KLDALVFTGGIGENAANIRKNIISKLANLGFMI 345 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCS-SCCEEEEEHHHHHHCHHHHHHHHHHTGGGTCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECCccccCcHHHHHHHHhhcccccEEe
Confidence 36799999999887766643 55 789999999988 667677765544 45444
No 158
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=41.18 E-value=11 Score=41.50 Aligned_cols=20 Identities=25% Similarity=0.586 Sum_probs=16.8
Q ss_pred eEEEEEcCCcceEEEEEcCCC
Q 007076 56 VFLGVDVGTGSARAGLFDESG 76 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g 76 (619)
.++|||+|||++.+++++ +|
T Consensus 3 ~viGIDlGTt~s~va~~~-~g 22 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMD-GT 22 (605)
T ss_dssp -CEEEECCSSEEEEEEEE-TT
T ss_pred CEEEEEcCCcCEEEEEEE-CC
Confidence 379999999999999886 34
No 159
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=40.73 E-value=63 Score=33.18 Aligned_cols=67 Identities=16% Similarity=0.237 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCC-HHHHHHHHhhh----------CCceeecC-CCCccchHHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII----------GCPIILPR-ENESVLLGAAILG 557 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s-~~~~Qi~Advl----------g~pV~~~~-~~e~~alGAAllA 557 (619)
.+++-.+..+...+..+... ..++.|++.||.++. +.+.+.+...+ ..+|+... ..++.++|||++.
T Consensus 313 ~~l~~~~~~L~~~i~~l~~~-ldP~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 313 DIITGVGAHVGRILAIMVNL-FNPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 44444444444444333221 246788888888753 55544333221 34566654 4567899997754
No 160
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=39.15 E-value=51 Score=32.46 Aligned_cols=70 Identities=19% Similarity=0.121 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCc-CC-HHHHHHHHhhhC--------CceeecCC-CCccchHHHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLA-KN-PLFLQQHADIIG--------CPIILPRE-NESVLLGAAILGA 558 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a-~s-~~~~Qi~Advlg--------~pV~~~~~-~e~~alGAAllA~ 558 (619)
.+++-.+..+...+..+... ..++.|++.||.+ +. +.+.+.+.+.+. .+|+.+.. .+++++|||.++.
T Consensus 216 ~~~~~~~~~l~~~i~~l~~~-~~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 216 RLVLQAARYVGIGLASLVKA-FDPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 44444444444444333221 2467888888877 54 555544433321 22555443 4577889999886
Q ss_pred hh
Q 007076 559 VA 560 (619)
Q Consensus 559 ~~ 560 (619)
..
T Consensus 295 ~~ 296 (302)
T 3vov_A 295 LE 296 (302)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 161
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=38.73 E-value=14 Score=37.31 Aligned_cols=20 Identities=30% Similarity=0.390 Sum_probs=16.1
Q ss_pred eEEEEEcCCcceEEEEEcCCC
Q 007076 56 VFLGVDVGTGSARAGLFDESG 76 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g 76 (619)
..+|||+|||++|+++. .++
T Consensus 4 ~~igIDlGT~~s~v~~~-~~~ 23 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR-GKG 23 (344)
T ss_dssp CEEEEEECSSEEEEEET-TTE
T ss_pred ceEEEEcCcCcEEEEEC-CCC
Confidence 37999999999999864 344
No 162
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=38.37 E-value=22 Score=35.21 Aligned_cols=63 Identities=14% Similarity=0.153 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcC--CHHHHHHHHhhhCCceeecCCCCccchHHHHHHHh
Q 007076 489 LATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAK--NPLFLQQHADIIGCPIILPRENESVLLGAAILGAV 559 (619)
Q Consensus 489 rAvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~--s~~~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~ 559 (619)
+.+++-.+..+...+..+... .++.|++.||.++ .+.+.+.+... +.. ...++++|||++|..
T Consensus 229 ~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~----i~~--~~~~~~~GAa~la~~ 293 (305)
T 1zc6_A 229 DALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQR----LVA--PQGDSAQGALLLLQR 293 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHH----CCC--CSSCHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhh----ccC--CCCCHHHHHHHHHhh
Confidence 366666666666665555433 6778888888764 23333333332 222 346778999998753
No 163
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=38.33 E-value=70 Score=33.19 Aligned_cols=68 Identities=9% Similarity=0.092 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcC-CHHHHHHHHhh-----h-----CCceeecC-CCCccchHHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAK-NPLFLQQHADI-----I-----GCPIILPR-ENESVLLGAAILG 557 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~-s~~~~Qi~Adv-----l-----g~pV~~~~-~~e~~alGAAllA 557 (619)
.+++-.+..+...+..+... ..++.|++.||.++ .+.+.+.+... + ..+|..+. ..+ .++|||.++
T Consensus 336 ~il~~~~~~L~~~i~~l~~~-ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~ 413 (429)
T 1z05_A 336 DVIQQLGRYLGAAIAIVINL-FNPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALI 413 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHH
Confidence 44444444444444333221 24678888888876 34444333221 1 34566654 345 899999987
Q ss_pred Hh
Q 007076 558 AV 559 (619)
Q Consensus 558 ~~ 559 (619)
..
T Consensus 414 ~~ 415 (429)
T 1z05_A 414 KQ 415 (429)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 164
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=38.22 E-value=31 Score=36.03 Aligned_cols=48 Identities=17% Similarity=0.077 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CC-----CCcCEEEEecCC-cCCHHHHHHHHhhh
Q 007076 489 LATVQGIAYGTRHIVEHCNA-HG-----HKIDTLLACGGL-AKNPLFLQQHADII 536 (619)
Q Consensus 489 rAvlEgiaf~~~~~l~~l~~-~g-----~~~~~I~~~GG~-a~s~~~~Qi~Advl 536 (619)
+-++|..+|+++..+-.+-. .+ ..++.|+++||. -+++.+++.+.+-+
T Consensus 323 ~lA~d~f~yri~k~IGa~aa~L~~~~~~G~vDaIVFTGGIGEns~~iR~~i~~~l 377 (438)
T 4h0p_A 323 KLTYAVFLDRLLNFVAQYLFKLLSEVPIESIDGLVFSGGIGEKGAELRRDVLKKL 377 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCGGGSCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCEEEECCccccCcHHHHHHHHHhH
Confidence 46789999998887655432 33 257899999997 48888887766554
No 165
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=37.76 E-value=27 Score=35.56 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=30.8
Q ss_pred CcCEEEEecCCcCCHH--HHHHHHhhhCCceeecCCCCccchHHHHHHHh
Q 007076 512 KIDTLLACGGLAKNPL--FLQQHADIIGCPIILPRENESVLLGAAILGAV 559 (619)
Q Consensus 512 ~~~~I~~~GG~a~s~~--~~Qi~Advlg~pV~~~~~~e~~alGAAllA~~ 559 (619)
.++.|+++||+|.-.. +.+.+.+.+ |.. .+...+.|+|...++..
T Consensus 290 ~~~~Ivl~GGGa~l~~~~l~~~i~~~~--~~~-~~p~~anA~G~~~~~~~ 336 (355)
T 3js6_A 290 SIDRIIVTGGGANIHFDSLSHYYSDVF--EKA-DDSQFSNVRGYEKLGEL 336 (355)
T ss_dssp SCSEEEEESTTHHHHHHHHHHHSSSCE--ECC-SSGGGHHHHHHHHHHHH
T ss_pred hccEEEEECcchhcchhhHHHHHHHHC--CCC-CCcHHHHHHHHHHHHHH
Confidence 4589999999986332 445777766 333 44455778999888754
No 166
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=36.98 E-value=54 Score=32.37 Aligned_cols=52 Identities=19% Similarity=0.305 Sum_probs=31.7
Q ss_pred ccHHHHHHcCCCCCCcEEEccchHHhhhhcCc--ccCCCcchhhhhhhhhcccCeEEEEecccceeeeeec
Q 007076 297 LTPAAAKELGLVPGTPVGTSLIDAHAGGVGVM--ESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSR 365 (619)
Q Consensus 297 l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~--g~~~~g~~~~~~~~~g~~~~~~~~~~GTs~~~~~~~~ 365 (619)
+.+.+.+++|+ ||. -..|..|+++|-. |..+. ..+.+++++||.--...+.+
T Consensus 89 l~~~l~~~~~~----pV~-v~NDanaaalaE~~~G~~~~------------~~~~~~l~~GtGiG~gii~~ 142 (302)
T 3epq_A 89 FLQTVXNEMXI----PVG-FSTDVNAAALGEFLFGEAXG------------LDSCLYITIGTGIGAGAIVE 142 (302)
T ss_dssp HHHHHHHHHCS----CEE-EEEHHHHHHHHHHHHSTTTT------------CSCEEEEEESSSEEEEEEET
T ss_pred hHHHHHHHhCC----CEE-EechhHHHHHHHHHhCCCCC------------CCcEEEEEECCceEEEEEEC
Confidence 56677777764 654 4689999888731 21110 13568899999754444444
No 167
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=36.10 E-value=48 Score=34.96 Aligned_cols=47 Identities=23% Similarity=0.252 Sum_probs=30.4
Q ss_pred EEEEecCCc-CCHHHHHHHHh----hh--CCceeecCCCCccchHHHHHHHhhc
Q 007076 515 TLLACGGLA-KNPLFLQQHAD----II--GCPIILPRENESVLLGAAILGAVAA 561 (619)
Q Consensus 515 ~I~~~GG~a-~s~~~~Qi~Ad----vl--g~pV~~~~~~e~~alGAAllA~~~~ 561 (619)
.|.+.||.. +.+.+.+.+.. .+ ..+|......+++.+|||++|+.+.
T Consensus 395 ~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~~dgs~iGAAllA~~~~ 448 (451)
T 1bdg_A 395 TVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLSEDGSGKGAAAIAASCT 448 (451)
T ss_dssp EEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEECTTHHHHHHHHHHTTC-
T ss_pred EEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEECCCccHHHHHHHHHHHh
Confidence 455667765 44555544433 33 4567666678899999999998753
No 168
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=35.62 E-value=36 Score=33.88 Aligned_cols=46 Identities=26% Similarity=0.293 Sum_probs=27.2
Q ss_pred CcCEEEEecCCcCC-HHHHHHHHhh----h----CCceeecC-CCCccchHHHHHH
Q 007076 512 KIDTLLACGGLAKN-PLFLQQHADI----I----GCPIILPR-ENESVLLGAAILG 557 (619)
Q Consensus 512 ~~~~I~~~GG~a~s-~~~~Qi~Adv----l----g~pV~~~~-~~e~~alGAAllA 557 (619)
.++.|++.||.++. +++.++...+ + ..+|+.+. ..+++++|||.+|
T Consensus 269 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 269 DPDLLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp CCSEEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred CCCEEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 45678888888764 4444432222 1 23454444 3456788999875
No 169
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=35.47 E-value=9.8 Score=37.53 Aligned_cols=63 Identities=13% Similarity=-0.098 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCcCCHHHHHHHHhhhCC---ceeecCCCCccchHHHHHHH
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGC---PIILPRENESVLLGAAILGA 558 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~---pV~~~~~~e~~alGAAllA~ 558 (619)
.+++-.+..+...+ .+. .-.+++.|++.||.+++ +.+.+...+.. ++.. ..++.++|||++|.
T Consensus 212 ~i~~~~~~~La~~i-~~~-~~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~--~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 212 QLVMNSFIAFFRRN-VMQ-YDYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGK--ILQSPMEGLIQYHS 277 (291)
T ss_dssp HHHHHHHHHHHTTT-GGG-SCTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEE--ECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHH-hcc-cCCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEee--cCCCHHHHHHHHHH
Confidence 55555555555555 222 11257789888988877 44444444443 4443 34678899998764
No 170
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=32.46 E-value=34 Score=35.46 Aligned_cols=47 Identities=11% Similarity=0.240 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHH-hCCCCcCEEEEecCCc-CCHHHHHHHHhhhC
Q 007076 490 ATVQGIAYGTRHIVEHCN-AHGHKIDTLLACGGLA-KNPLFLQQHADIIG 537 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~-~~g~~~~~I~~~GG~a-~s~~~~Qi~Advlg 537 (619)
-++|..+|+++..+-.+- ..+ .++.|+++||.. +++.+++.+.+-++
T Consensus 300 lA~d~f~yri~k~IGa~~a~Lg-gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 300 LVLEIYDYRIAKYIGAYAAAMN-GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 578999999887765553 345 689999999988 88888887776543
No 171
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=32.43 E-value=54 Score=33.33 Aligned_cols=69 Identities=10% Similarity=0.076 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecC-CcCCHHHHH------HHHhh-h-----------CCceeecC-CCCcc
Q 007076 490 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGG-LAKNPLFLQ------QHADI-I-----------GCPIILPR-ENESV 549 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~~~g~~~~~I~~~GG-~a~s~~~~Q------i~Adv-l-----------g~pV~~~~-~~e~~ 549 (619)
.+++-.+..+...+..+... ..++.|++.|| .++++.+.+ .+... + ..||++.. ..+++
T Consensus 283 ~~l~~~~~~L~~~i~~l~~~-l~p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~ 361 (373)
T 2q2r_A 283 KAMKKYHEYLMRVGSEASMA-LLPLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLN 361 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchh
Confidence 34444444444433333221 24566777777 666655554 22222 2 24565543 45678
Q ss_pred chHHHHHHHh
Q 007076 550 LLGAAILGAV 559 (619)
Q Consensus 550 alGAAllA~~ 559 (619)
++|||.++..
T Consensus 362 l~GAa~l~~~ 371 (373)
T 2q2r_A 362 LMGCYRCGLD 371 (373)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 172
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=30.35 E-value=54 Score=31.51 Aligned_cols=46 Identities=28% Similarity=0.416 Sum_probs=29.5
Q ss_pred CcCEEEEecCCcCC-HHHHHHHHhhhCCceeecCC-CCccchHHHHHHHh
Q 007076 512 KIDTLLACGGLAKN-PLFLQQHADIIGCPIILPRE-NESVLLGAAILGAV 559 (619)
Q Consensus 512 ~~~~I~~~GG~a~s-~~~~Qi~Advlg~pV~~~~~-~e~~alGAAllA~~ 559 (619)
.++.|++.||.++. +.+.+.+. ...+|..+.. .++.++|||.++..
T Consensus 214 dP~~IvlgG~i~~~~~~~~~~~~--~~~~i~~s~l~~~a~~~GAa~l~~~ 261 (267)
T 1woq_A 214 SPELFIVGGGISKRADEYLPNLR--LRTPIVPAVLRNEAGIVGAAIEIAL 261 (267)
T ss_dssp CCSEEEEESGGGGGGGGTGGGCC--CSSCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeChhhcccHHHHHhhc--cCceEEECCcCCcHHHHHHHHHHHh
Confidence 46788888888764 44433322 2356666553 45688999998754
No 173
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=29.84 E-value=48 Score=34.34 Aligned_cols=46 Identities=9% Similarity=0.188 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHH-hCCCCcCEEEEecCCc-CCHHHHHHHHhhh
Q 007076 490 ATVQGIAYGTRHIVEHCN-AHGHKIDTLLACGGLA-KNPLFLQQHADII 536 (619)
Q Consensus 490 AvlEgiaf~~~~~l~~l~-~~g~~~~~I~~~GG~a-~s~~~~Qi~Advl 536 (619)
-++|-.+|+++..+-.+- ..| .++.|+++||.. +++.+++.+.+-+
T Consensus 300 lA~d~f~yri~k~IGa~~a~Lg-gvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 300 LALEIFAYKVKKFIGEYSAVLN-GADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhC-CCCEEEECccccccCHHHHHHHHhhh
Confidence 588999999988776554 354 588999999998 8888888777654
No 174
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=28.53 E-value=56 Score=34.33 Aligned_cols=84 Identities=20% Similarity=0.285 Sum_probs=50.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH--------HHHHHHhC-CCC--cCEEEEecCCc-CCHHHHHHHHhhh----C-Cce
Q 007076 478 DSSEKQLALLYLATVQGIAYGTRH--------IVEHCNAH-GHK--IDTLLACGGLA-KNPLFLQQHADII----G-CPI 540 (619)
Q Consensus 478 ~~~~~~l~~~~rAvlEgiaf~~~~--------~l~~l~~~-g~~--~~~I~~~GG~a-~s~~~~Qi~Advl----g-~pV 540 (619)
..+..|.. ++|-+.+.|.-...+ ++..+.+. +.. .-.|-+.|+.- +.|.+.+.+...+ + .+|
T Consensus 339 ~~t~~d~~-~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~~~~~~~~VgvDGsvy~~~P~f~~~l~~~l~~l~~~~~v 417 (445)
T 3hm8_A 339 PLTSDDAL-MVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRFSSLVAATVRELAPRCVV 417 (445)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEE
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCcEEEEeceehccChhHHHHHHHHHHHhCCCCcE
Confidence 44555543 566777776654333 23333221 222 22455667754 5566665555443 3 578
Q ss_pred eecCCCCccchHHHHHHHhhcc
Q 007076 541 ILPRENESVLLGAAILGAVAAK 562 (619)
Q Consensus 541 ~~~~~~e~~alGAAllA~~~~G 562 (619)
.....++++.+|||++|+++..
T Consensus 418 ~~~~s~DGSg~GAAl~AA~a~~ 439 (445)
T 3hm8_A 418 TFLQSEDGSGKGAALVTAVACR 439 (445)
T ss_dssp EEEECSSCHHHHHHHHHHHHHH
T ss_pred EEEECCCCchHHHHHHHHHHHH
Confidence 7777889999999999998753
No 175
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=27.09 E-value=40 Score=35.78 Aligned_cols=83 Identities=19% Similarity=0.262 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHH--------HHHHHhC-CCCc--CEEEEecCCc-CCHHHHHHHHhh-----hCCcee
Q 007076 479 SSEKQLALLYLATVQGIAYGTRHI--------VEHCNAH-GHKI--DTLLACGGLA-KNPLFLQQHADI-----IGCPII 541 (619)
Q Consensus 479 ~~~~~l~~~~rAvlEgiaf~~~~~--------l~~l~~~-g~~~--~~I~~~GG~a-~s~~~~Qi~Adv-----lg~pV~ 541 (619)
.+..|. .++|-+.+.|.-....+ +..+.+. +... -.|-+.|+.- +.|.+.+.+... -+++|.
T Consensus 364 ~~~~d~-~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~~~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~~~~v~ 442 (470)
T 3f9m_A 364 PSTTDC-DIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPSCEIT 442 (470)
T ss_dssp CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEE
T ss_pred CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeccHHHhCchHHHHHHHHHHHHcCCCeEE
Confidence 344443 35667777665543332 3333221 1111 3466667754 566666665555 346788
Q ss_pred ecCCCCccchHHHHHHHhhcc
Q 007076 542 LPRENESVLLGAAILGAVAAK 562 (619)
Q Consensus 542 ~~~~~e~~alGAAllA~~~~G 562 (619)
.....+++.+|||++|+++..
T Consensus 443 l~~a~DGSg~GAAliAa~a~~ 463 (470)
T 3f9m_A 443 FIESEEGSGRGAALVSAVACK 463 (470)
T ss_dssp EEECSSHHHHHHHHHHHHHTC
T ss_pred EEEcCCCcHHHHHHHHHHHHH
Confidence 878899999999999998764
No 176
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=27.04 E-value=37 Score=36.75 Aligned_cols=59 Identities=12% Similarity=0.154 Sum_probs=37.1
Q ss_pred CCeEEEEEcCCcceEEEEEc-CCC--CEEEEEEeecccccCCCccccCHHHHHHHHHHHHHHHHHHcCC
Q 007076 54 RSVFLGVDVGTGSARAGLFD-ESG--KLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANV 119 (619)
Q Consensus 54 ~~~~lgIDiGTTsiKa~l~d-~~g--~il~~~~~~~~~~~~~g~~e~dp~~~~~~~~~~l~~~~~~~~~ 119 (619)
|+|++|||||+|++.+++-+ .+| +++.....++.=. .| ..++.....++ |++++++++.
T Consensus 1 m~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~ttGi--KG-t~~Ni~g~~~s----i~~a~~~a~~ 62 (607)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGM--KG-TRDNIAGTLAA----LEQALAKTPW 62 (607)
T ss_dssp -CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECCSS--TT-SGGGHHHHHHH----HHHHHTTSSC
T ss_pred CcEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCCcc--ce-eeeCHHHHHHH----HHHHHHHhCC
Confidence 36899999999999999866 335 4567666665311 11 34555555544 5555555543
No 177
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=26.78 E-value=27 Score=35.33 Aligned_cols=22 Identities=36% Similarity=0.563 Sum_probs=17.4
Q ss_pred eEEEEEcCCcceEEEEEcCCCCEE
Q 007076 56 VFLGVDVGTGSARAGLFDESGKLL 79 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~~g~il 79 (619)
..+|||+||+++|+.. .+|.++
T Consensus 22 ~~igiDlG~~~tkv~~--~~g~~~ 43 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG--VDGKRI 43 (346)
T ss_dssp EEEEEEECSSEEEEEC--GGGCEE
T ss_pred EEEEEecCCcceeEEe--cCCCEE
Confidence 4899999999999874 456554
No 178
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=25.83 E-value=56 Score=25.32 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=24.7
Q ss_pred HHHHHHcCCCccccccccccCcccccCCCccCCCccHHHHHHcCCCCCCc
Q 007076 263 DEFWEEIGLGDLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTP 312 (619)
Q Consensus 263 ~~ll~~~gi~~~l~~~lp~l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~p 312 (619)
+++|+.+++.+ .+||+|. .++.+|+.+|+..|--
T Consensus 23 ~~lL~~y~i~~---~qLP~I~-------------~~DPvar~~G~k~GdV 56 (77)
T 1eik_A 23 KRVLKELDAHP---EQLPKIK-------------TTDPVAKAIGAKRGDI 56 (77)
T ss_dssp HHHHHHTTCCT---TTSCCCB-------------TTSHHHHGGGCCTTCE
T ss_pred HHHHHHcCCCH---HHCCeee-------------CcCHhhHHhCCCCCCE
Confidence 46889999876 3668653 5677888888877643
No 179
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=25.70 E-value=18 Score=37.63 Aligned_cols=47 Identities=13% Similarity=0.191 Sum_probs=32.8
Q ss_pred cCEEEEecCCcCCHHHHHHHHhhhCCc----------------------eeecC---CCCccchHHHHHHHh
Q 007076 513 IDTLLACGGLAKNPLFLQQHADIIGCP----------------------IILPR---ENESVLLGAAILGAV 559 (619)
Q Consensus 513 ~~~I~~~GG~a~s~~~~Qi~Advlg~p----------------------V~~~~---~~e~~alGAAllA~~ 559 (619)
.++|+++||.++-+-+.+.+.+-++.. |.+.. ...++.+|++++|..
T Consensus 316 ~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 316 YKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 467999999999988887777654321 33322 235778899999864
No 180
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=24.84 E-value=69 Score=33.01 Aligned_cols=46 Identities=9% Similarity=-0.045 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCc-CCHHHHHHHHhh
Q 007076 489 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADI 535 (619)
Q Consensus 489 rAvlEgiaf~~~~~l~~l~~-~g~~~~~I~~~GG~a-~s~~~~Qi~Adv 535 (619)
+-++|..+|+++..+-.+-. .+. ++.|+++||.. .++.+++.+.+-
T Consensus 303 ~lA~d~f~yri~k~IGa~aa~L~G-vDaIVFTgGIGEns~~vR~~i~~~ 350 (404)
T 4h0o_A 303 QLAFDVYIKQLAKTIGGLMVEIGG-LDLLVFTDQMGLEVWQVRKAICDK 350 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-CSEEEEEHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CCEEEECCccccCcHHHHHHHHhh
Confidence 36789999999887765533 343 89999999964 668887766544
No 181
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=24.45 E-value=1.1e+02 Score=17.75 Aligned_cols=21 Identities=24% Similarity=0.281 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 007076 594 DAKYLIFRELFEQQVSQRSIM 614 (619)
Q Consensus 594 ~~~y~~y~~l~~~~~~~~~~~ 614 (619)
+++|....++-+.++.+|+-+
T Consensus 4 delykeledlqerlrklrkkl 24 (27)
T 3twe_A 4 DELYKELEDLQERLRKLRKKL 24 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 456666666666666666544
No 182
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=22.66 E-value=21 Score=29.85 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=27.3
Q ss_pred HHHH-HHHHHhCchhHhccceeeechhHHHhhhc
Q 007076 191 PPKL-LWVKENLQESWSMVFRWMDLSDWLSYRAT 223 (619)
Q Consensus 191 ~~kl-~Wl~~~~pe~~~~~~~~~~~~dyl~~~LT 223 (619)
..|+ .|+++|-.+++.|...-..=.|||.|++|
T Consensus 78 ~akvekwf~rnc~~v~gr~cta~EK~d~l~~l~~ 111 (112)
T 1dw0_A 78 SARVEKWLGRNCNSVIGRDCTPGEKADLLAWLAA 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhHHHcccCCHHHHHHHHHHHHh
Confidence 5565 49999999999988776677899999886
No 183
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=22.52 E-value=1.5e+02 Score=29.72 Aligned_cols=68 Identities=13% Similarity=-0.043 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCcCEEEEecCCcCCHHHHHHHHhhhCCcee-----e-cCC-CCccchHH
Q 007076 482 KQLALLYLATVQGIAYGTRHIVEHC-NAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPII-----L-PRE-NESVLLGA 553 (619)
Q Consensus 482 ~~l~~~~rAvlEgiaf~~~~~l~~l-~~~g~~~~~I~~~GG~a~s~~~~Qi~Advlg~pV~-----~-~~~-~e~~alGA 553 (619)
.+..++.+.++|-..-.+.+.++.+ ++.++. +|+++|++ +.+...+|+. +|+. + ++. .-+.|+|+
T Consensus 246 ~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~~--~vv~aG~G---~~L~~~la~~--~~~~~~~~~i~~~~s~vapA~av 318 (334)
T 3cet_A 246 IDAENIAKNYYELWKELILENVENVAEKYGSK--KVVITGLG---ENILKDALAD--FEVISVAERYGKDVSLATPSFAV 318 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEESTT---HHHHHHHTTT--SEEEEHHHHHCHHHHHSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEeCCc---HHHHHHHHhh--CCeeehhcccCcccccccCHHHH
Confidence 3444445577777776666666444 333333 89999988 4677777766 7776 3 221 22447788
Q ss_pred HHH
Q 007076 554 AIL 556 (619)
Q Consensus 554 All 556 (619)
|++
T Consensus 319 A~l 321 (334)
T 3cet_A 319 AEL 321 (334)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 184
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=22.28 E-value=62 Score=26.43 Aligned_cols=40 Identities=10% Similarity=0.041 Sum_probs=31.0
Q ss_pred eEEcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007076 579 QVIHPSKDPKVKKYHDAKYLIFRELFEQQVSQRSIMAQAL 618 (619)
Q Consensus 579 ~~~~P~~~~~~~~~y~~~y~~y~~l~~~~~~~~~~~~~~~ 618 (619)
+.|++.+|+-+...|.++-..-..+-.++..+.+.+|++.
T Consensus 63 ~~~E~DPDevNK~tl~~R~~~Vsalq~KiaeLKrqLAd~v 102 (107)
T 2k48_A 63 KAVEVDPDDVNKSTLQNRRAAVSTLETKLGELKRQLADLV 102 (107)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444433888888999888888888888889999998864
No 185
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=21.49 E-value=2.2e+02 Score=29.19 Aligned_cols=64 Identities=20% Similarity=0.353 Sum_probs=44.7
Q ss_pred CcCEEEE--ecCCcCCHHHHHHHHhh-----hCCceeecCCCCccchHHHHHHHhhcccc--CCHHHHHHHhh
Q 007076 512 KIDTLLA--CGGLAKNPLFLQQHADI-----IGCPIILPRENESVLLGAAILGAVAAKRY--SSLIEAMKAMN 575 (619)
Q Consensus 512 ~~~~I~~--~GG~a~s~~~~Qi~Adv-----lg~pV~~~~~~e~~alGAAllA~~~~G~~--~~~~~a~~~~~ 575 (619)
.++-|++ .||.++.+...+-+.+. .++||.+--.....-.|-.++.-.++..+ +++++|+++.+
T Consensus 310 ~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl~G~n~~~g~~~l~~~g~~~~~~~~~~~aa~~~v 382 (388)
T 2nu8_B 310 KVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVV 382 (388)
T ss_dssp TCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEEESTTHHHHHHHHHTTCSSEEECSSHHHHHHHHH
T ss_pred CCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEeCCCCHHHHHHHHHHCCCceecCCCHHHHHHHHH
Confidence 3455554 68888888877776665 47898763333345678888876677778 88888877764
No 186
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=20.70 E-value=73 Score=24.66 Aligned_cols=46 Identities=11% Similarity=0.077 Sum_probs=33.3
Q ss_pred HhhcCCeEEcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007076 573 AMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFEQQVSQRSIMAQAL 618 (619)
Q Consensus 573 ~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~~~~~~~~~~~~~~ 618 (619)
++......|++.+|+-+...|..+-..-..+-.++..+.+.+|++.
T Consensus 27 KLkdA~~~~e~DPDevNK~~~~~R~~~V~~lq~Ki~elkrqlAd~v 72 (78)
T 2ic6_A 27 KLKDAERAVELDPDDVNKSTLQSRRAAVSALETKLGELKRELADLI 72 (78)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344455544888888899888888877788888888888764
No 187
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=20.45 E-value=55 Score=25.44 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=25.2
Q ss_pred CCHHHHHHcCCCccccccccccCcccccCCCccCCCccHHHHHHcCCCCCC
Q 007076 261 WDDEFWEEIGLGDLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGT 311 (619)
Q Consensus 261 W~~~ll~~~gi~~~l~~~lp~l~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~ 311 (619)
--+++|+.+++.+ .+||+|. .++.+|+.+|+..|-
T Consensus 19 Ek~~lL~~y~i~~---~qLPrI~-------------~~DPvar~~G~k~Gd 53 (78)
T 1hmj_A 19 EVEEILKRYNIKI---QQLPKIY-------------EDDPVIQEIGAKEGD 53 (78)
T ss_pred HHHHHHHHcCCCH---HHCCeee-------------CcCHhhHHhCCCCCC
Confidence 3457899999876 3668653 566778888887774
No 188
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=20.02 E-value=73 Score=32.65 Aligned_cols=28 Identities=18% Similarity=0.288 Sum_probs=22.9
Q ss_pred eEEEEEcCCcceEEEEEcC-CCCEEEEEE
Q 007076 56 VFLGVDVGTGSARAGLFDE-SGKLLGSAS 83 (619)
Q Consensus 56 ~~lgIDiGTTsiKa~l~d~-~g~il~~~~ 83 (619)
.+|.|..|+||+|..|||. +++++.+..
T Consensus 3 ~iLviN~GSSSlK~~l~~~~~~~~l~~G~ 31 (384)
T 3khy_A 3 EILVLNCGSSSVKFALINPHTSQSLVTGL 31 (384)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCchhheEEEEecCCCceEEEEE
Confidence 6899999999999999994 556666543
Done!